BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037537
(677 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/709 (69%), Positives = 573/709 (80%), Gaps = 33/709 (4%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
FR +LKTC+ RDL TGKSLH+LY+K+ +P S Y SNHFILLYSKCG L+ A AF
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NVFSFN ++AAYA++ R A QLFDQIP+PDLVSYNTLISAYADCG+T AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
MRE D DGFTLS +ITA +++ LI QLH +A+ GFD Y SVNN+LLT Y +NG LD
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+AKRVFY MG I+DEVSWNSM+VAYGQH+EG +AL LFQEMV L +DM+TLAS+LTAF
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T LEDL GGLQFH LIK+GFHQNSH+GSGLIDLY+KC G M DC KVFEEI +PDLVLW
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
NTM+SGYSQ EE+ + AL CF+++ +GY P+DCSFVCVISACSNL SPS GKQIH+L +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K +I SNRISV+NAL+AMYSKCGNL+DARRLFDRM EHNTVSLNSMIAGYAQHGI ME+L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+WMLE I PT+ITF+SVLSACAHTG+V EG YF+MMK+ F EPE EHYSCMIDL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 481 LGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPY 523
LGRAGKL++AE LI MPFNPGSI A+KAAN LQLEPSNA PY
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YA++G+WEEVAT+R+ MRDRGV+KKPG SWIEVKK++HVFVAED SHPMIKEI+
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 584 NYLEEMSRKMKQAGYVPD---------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+LEEMS KMK+AGYVPD KE RL HHSEKLAVAFGL+ST GEP+
Sbjct: 611 EFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPV 670
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LV+KNLRICGDCHNAIKFISAIAGREITVRD +RFHCFK+G+CSCGDYW
Sbjct: 671 LVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----- 280
Q+ + +L + DL G H+ IKS +++ + I LY+KC
Sbjct: 3 QISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWA 62
Query: 281 ----GDMRD---------------------CMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
D+ D ++F++IP+PDLV +NT+IS Y+ E +
Sbjct: 63 RKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-T 121
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
ALG F + +G D + VI+AC + +G Q+H++ + S +SVNNAL
Sbjct: 122 APALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIG-QLHSVAVSSGFDS-YVSVNNAL 179
Query: 376 VAMYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
+ Y K G+L+DA+R+F M + VS NSMI Y QH G +AL LF+ M+ +
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR-AGKLTDAERL 493
T SVL+A ++ G ++ + GF S +IDL + G ++D ++
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 494 IEAM 497
E +
Sbjct: 299 FEEI 302
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 42/313 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL DL G H +K ++++ + I LYSKCG
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG----------- 290
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-TESALSLF 119
++ R++F++I +PDLV +NT++S Y+ + E AL F
Sbjct: 291 -------------------GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECF 331
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF-DHYASVNNSLLTCYSR 176
+ M+ + + + +I+A SN + KQ+H LA+ + SV+N+L+ YS+
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L +A+R+F M E + VS NSM+ Y QH +E+L LFQ M+ Q+ T S
Sbjct: 392 CGNLQDARRLFDRMAE-HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+L+A + G + +++K F+ + H S +IDL + +G + + + +
Sbjct: 451 VLSACAHTGRVEEGWNYF-NMMKEKFNIEPEAEHY-SCMIDLLGR-AGKLSEAENLIARM 507
Query: 294 P-QPDLVLWNTMI 305
P P + W +++
Sbjct: 508 PFNPGSIGWASLL 520
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/709 (69%), Positives = 572/709 (80%), Gaps = 33/709 (4%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
FR +LKTC+ RDL TGKSLH+LY+K+ +P S Y SNHFILLYSKCG L+ A AF
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NVFSFN ++AAYA++ R A QLFDQIP+PDLVSYNTLISAYADCG+T AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
MRE D D FTLS +ITA +++ LI QLH +A+ GFD Y SVNN+LLT Y +NG LD
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+AKRVFY MG I+DEVSWNSM+VAYGQH+EG +AL LFQEMV L +DM+TLAS+LTAF
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T LEDL GGLQFH LIK+GFHQNSH+GSGLIDLY+KC G M DC KVFEEI +PDLVLW
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
NTM+SGYSQ EE+ + AL CF+++ +GY P+DCSFVCVISACSNL SPS GKQIH+L +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K +I SNRISV+NAL+AMYSKCGNL+DARRLFDRM EHNTVSLNSMIAGYAQHGI ME+L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+WMLE I PT+ITF+SVLSACAHTG+V EG YF+MMK+ F EPE EHYSCMIDL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 481 LGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPY 523
LGRAGKL++AE LI MPFNPGSI A+KAAN LQLEPSNA PY
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YA++G+WEEVAT+R+ MRDRGV+KKPG SWIEVKK++HVFVAED SHPMIKEI+
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 610
Query: 584 NYLEEMSRKMKQAGYVPD---------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+LEEMS KMK+AGYVPD KE RL HHSEKLAVAFGL+ST GEP+
Sbjct: 611 EFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPV 670
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LV+KNLRICGDCHNAIKFISAIAGREITVRD +RFHCFK+G+CSCGDYW
Sbjct: 671 LVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----- 280
Q+ + +L + DL G H+ IKS +++ + I LY+KC
Sbjct: 3 QISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWA 62
Query: 281 ----GDMRD---------------------CMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
D+ D ++F++IP+PDLV +NT+IS Y+ E +
Sbjct: 63 RKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-T 121
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
ALG F + +G D + VI+AC + +G Q+H++ + S +SVNNAL
Sbjct: 122 APALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIG-QLHSVAVSSGFDS-YVSVNNAL 179
Query: 376 VAMYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
+ Y K G+L+DA+R+F M + VS NSMI Y QH G +AL LF+ M+ +
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR-AGKLTDAERL 493
T SVL+A ++ G ++ + GF S +IDL + G ++D ++
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 494 IEAM 497
E +
Sbjct: 299 FEEI 302
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 42/313 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL DL G H +K ++++ + I LYSKCG
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG----------- 290
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-TESALSLF 119
++ R++F++I +PDLV +NT++S Y+ + E AL F
Sbjct: 291 -------------------GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECF 331
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF-DHYASVNNSLLTCYSR 176
+ M+ + + + +I+A SN + KQ+H LA+ + SV+N+L+ YS+
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L +A+R+F M E + VS NSM+ Y QH +E+L LFQ M+ Q+ T S
Sbjct: 392 CGNLQDARRLFDRMAE-HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+L+A + G + +++K F+ + H S +IDL + +G + + + +
Sbjct: 451 VLSACAHTGRVEEGWNYF-NMMKEKFNIEPEAEHY-SCMIDLLGR-AGKLSEAENLIARM 507
Query: 294 P-QPDLVLWNTMI 305
P P + W +++
Sbjct: 508 PFNPGSIGWASLL 520
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/712 (66%), Positives = 573/712 (80%), Gaps = 35/712 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TFR +LK C+ +RDL+TGK+LHALY K+L+P S YLSNHF LLYSKCG L A +F+ T
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+ NVFS+N L+ AYA+ I ARQ+FD+IPQPD+VSYNTLI+AYAD G+ AL LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
++RE RF DGFTLSG+I A +++ L++QLHC + CG+D YASVNN++L CYSR GFL
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190
Query: 181 DEAKRVFYEMGE--IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+EA+RVF EMGE +DEVSWN+M+VA GQHREGLEA++LF+EMV L +DM+T+AS+L
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
TAFT ++DLVGG+QFH +IKSGFH NSH+GSGLIDLY+KC+G M +C KVFEEI PDL
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
VLWNTMISG+SQ E+ S+ + CF+++ G+HPDDCSFVCV SACSNL SPS+GKQ+HA
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK +I NR+SVNNALVAMYSKCGN+ DARR+FD MPEHN VSLNSMIAGYAQHG+ +
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
E+LRLFE ML+ +I P ITF++VLSAC HTGKV EGQKYF+MMK+ F EPE EHYSCM
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNA 520
IDLLGRAGKL +AER+IE MPFNPGSI A+KAAN FLQLEP NA
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNA 550
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
PYVML+N+YA++ +WEE AT++RLMR+RGV+KKPG SWIE+ K++HVFVAED SHPMIK
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610
Query: 581 EIHNYLEEMSRKMKQAGYVPD---------------KEKRLVHHSEKLAVAFGLLSTSYG 625
EIH Y+ E+ RKMKQAGYVPD KE+RL++HSEKLAVAFGL+ST
Sbjct: 611 EIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEW 670
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PILV+KNLRICGDCHNAIK ISAI GREITVRDT+RFHCFK+G CSCGDYW
Sbjct: 671 VPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 38/303 (12%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC--------S 280
L + T ++L A + DL+ G HA KS ++++ + LY+KC S
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 281 GDMRD----------------------CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
D+ +VF+EIPQPD+V +NT+I+ Y+ + E A
Sbjct: 67 FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGE-CRPA 125
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
L F ++ + + D + VI AC + L +Q+H + + SVNNA++A
Sbjct: 126 LRLFAEVRELRFGLDGFTLSGVIIACGD-DVGLVRQLHCFVV-VCGYDCYASVNNAVLAC 183
Query: 379 YSKCGNLEDARRLFDRMPE---HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
YS+ G L +ARR+F M E + VS N+MI QH G+EA+ LF M+ +
Sbjct: 184 YSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDM 243
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR-AGKLTDAERLI 494
T SVL+A + G ++ MM GF S +IDL + AG + + ++
Sbjct: 244 FTMASVLTAFTCVKDLVGGMQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302
Query: 495 EAM 497
E +
Sbjct: 303 EEI 305
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/711 (67%), Positives = 568/711 (79%), Gaps = 34/711 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+FRQ+LK+C+ +DL+TGKSLH +YLK+L+P S YLSNHFILLYSKC L+ AHHAFNQT
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFSFN L+AAYA++ I A LFDQIPQPDLVS+NTLI+AYAD GDT SALSLF
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+MRE DGFT SG+ITA N++ LI+QLH LA GFD Y SV NSLLT YS+NG L
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189
Query: 181 DEAKRVFYEMG-EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+EA+ VF MG E++DEVSWNSM+VAYGQH+ GL+AL L+++MV +DM+TLAS+LT
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
F+ +EDL GGLQFHA IK+GF++N H+GSGLID+YAKC M + KVFEEI DLV
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHAL 358
+WNTMISGYSQ +E S +AL CF+++ R GY PDDCSFVC ISACSNL SPS GKQ HAL
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K EI SN+ISVNNALV MYSKCGNL+DAR+LF RMP+HNTV+LNS+IAGYAQHGIG E
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTE 429
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+L LFE ML +I PT+IT VS+LSACAHTG+V EG+KYF+MMKD+FG EPE EHYSCMI
Sbjct: 430 SLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMI 489
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAGKL++AERLI+ MPF+PGS +A KAAN FLQLEP+NAV
Sbjct: 490 DLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAV 549
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
PY+MLA++Y+A+ KWEE A IR+LMRDRG++KKPG SWIE+ K++HVFVAED SHP IKE
Sbjct: 550 PYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKE 609
Query: 582 IHNYLEEMSRKMKQAGYVPD---------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
IH YL+EM KMK+AGYVPD KE L HHSEKLAVAFGLL T +GE
Sbjct: 610 IHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGE 669
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+LV+KNLRICGDCHNAIKF+SAIA R+ITVRD YRFHCF+DGRCSCGDYW
Sbjct: 670 PLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 37/305 (12%)
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----- 280
Q + + IL + + +DL+ G H +KS ++++ + I LY+KC+
Sbjct: 3 QFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTA 62
Query: 281 -------------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
+ +F++IPQPDLV +NT+I+ Y+ + + +
Sbjct: 63 HHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD-T 121
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
AL F ++ +G D +F VI+AC N L +Q+H+L S +SV N+L
Sbjct: 122 LSALSLFGEMREMGLVMDGFTFSGVITACCN-HVGLIRQLHSLAFSSGFDS-YVSVKNSL 179
Query: 376 VAMYSKCGNLEDARRLFDRMPEH--NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+ YSK G LE+A +F+ M E + VS NSMI Y QH G++AL L+ M+
Sbjct: 180 LTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI 239
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK-LTDAER 492
T SVL+ + ++ G ++ + GF S +ID+ + G ++++ +
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKT-GFNKNRHVGSGLIDMYAKCGAGMSESRK 298
Query: 493 LIEAM 497
+ E +
Sbjct: 299 VFEEI 303
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/712 (66%), Positives = 569/712 (79%), Gaps = 35/712 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TFR +LK C+ +RDL+TGK LHALY K+L+P S YLSNHF LLYSKCG L A +F+ T
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+ NVFS+N L+ AYA+ I AR++FD+IPQPD+VSYNTLI+AYAD G+ L LF+
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
++RE R DGFTLSG+ITA +++ L++QLHC + CG D YASVNN++L CYSR GFL
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFL 190
Query: 181 DEAKRVFYEMGEI--KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA+RVF EMGE +DEVSWN+M+VA GQHREG+EA+ LF+EMV L +DM+T+AS+L
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVL 250
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
TAFT ++DLVGG QFH +IKSGFH NSH+GSGLIDLY+KC+G M +C KVFEEI PDL
Sbjct: 251 TAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
VLWNTMISG+S E+ S+ L CF+++ R G+ PDDCSFVCV SACSNLS PSLGKQ+HA
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK ++ NR+SVNNALVAMYSKCGN+ DARR+FD MPEHNTVSLNSMIAGYAQHG+ +
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
E+LRLFE MLE +I P +ITF++VLSAC HTGKV EGQKYF+MMK+ F EPE EHYSCM
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNA 520
IDLLGRAGKL +AER+IE MPFNPGSI A+KAAN FL+LEP NA
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
PYVML+N+YA++ +WEE AT++RLMR+RGV+KKPG SWIE+ K++HVFVAED SHPMIK
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610
Query: 581 EIHNYLEEMSRKMKQAGYVPD---------------KEKRLVHHSEKLAVAFGLLSTSYG 625
EIH Y+ +M +KMKQAGYVPD +E+RL++HSEKLAVAFGL+ST G
Sbjct: 611 EIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEG 670
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PILV+KNLRICGDCHNA+K ISA+ GREITVRDT+RFHCFK+G CSC DYW
Sbjct: 671 VPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 40/304 (13%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM- 287
L + T ++L A + DL+ G HA KS ++++ + LY+KC G + +
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKC-GSLHNAQT 65
Query: 288 ------------------------------KVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+VF+EIPQPD+V +NT+I+ Y+ + E
Sbjct: 66 SFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGE-CGP 124
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVA 377
L F+++ + D + VI+AC + L +Q+H + + SVNNA++A
Sbjct: 125 TLRLFEEVRELRLGLDGFTLSGVITACGD-DVGLVRQLHCFVV-VCGHDCYASVNNAVLA 182
Query: 378 MYSKCGNLEDARRLFDRMPE---HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
YS+ G L +ARR+F M E + VS N+MI QH GMEA+ LF M+ +
Sbjct: 183 CYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVD 242
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR-AGKLTDAERL 493
T SVL+A + G+++ MM GF S +IDL + AG + + ++
Sbjct: 243 MFTMASVLTAFTCVKDLVGGRQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGSMVECRKV 301
Query: 494 IEAM 497
E +
Sbjct: 302 FEEI 305
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/711 (63%), Positives = 556/711 (78%), Gaps = 34/711 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+FRQ LKTC+ RDL TGKSLHALY+K+ VP S YLSNHF+LLYSKC LSAA F+ T
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFSFN L++AYA++ + A QLFD++PQPD VSYNTLI+AYA GDT+ A LF
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+MRE D DGFTLSG+ITA N+ LI+QLH L++ G D Y SV N+L+T YS+NGFL
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA+R+F+ + E +DEVSWNSMVVAY QHREG +AL+L+ EM L +D++TLAS+LTA
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
FT+++DL+GGLQFHA LIKSG+HQNSH+GSGLIDLY+KC G M DC KVF+EI PDLVL
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WNTMISGYS E+ SD+AL CF++L VG+ PDDCS VCVISACSN+ SPS G+Q+H L
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K++I SNRISVNNAL+AMYSKCGNL DA+ LFD MPEHNTVS NSMIAGYAQHG+G ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF+ MLE + PTNITF+SVL+ACAHTG+V +G+ YF+MMK FG EPE H+SCMID
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LLGRAGKL++AERLIE +PF+PG +A+KAAN LQL+P NA P
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YVMLANIY+ +G+ ++ A++R+LMRDRGV+KKPG SWIEV +++H+FVAED HPMIK+I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609
Query: 583 HNYLEEMSRKMKQAGYVP----------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
YLEEM RK+K+ GY P ++E RL HHSEKLAV+FGL+ST GE
Sbjct: 610 QEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGE 669
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PILV KNLRIC DCHNAIK+IS + REITVRD++RFHCFKDG+CSCG YW
Sbjct: 670 PILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 147/310 (47%), Gaps = 44/310 (14%)
Query: 231 MYTLASILTAFTSL-------EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC---S 280
M+ +S+L +F DL G HA IKS ++++ + + LY+KC S
Sbjct: 1 MHHFSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLS 60
Query: 281 GDMR------DC---------------------MKVFEEIPQPDLVLWNTMISGYSQKEE 313
R DC ++F+E+PQPD V +NT+I+ Y+++ +
Sbjct: 61 AARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN 373
+ A F ++ D + +I+AC ++ L +Q+HAL++ + S +SV N
Sbjct: 121 -TQPAFQLFLEMREAFLDMDGFTLSGIITAC-GINVGLIRQLHALSVVTGLDS-YVSVGN 177
Query: 374 ALVAMYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
AL+ YSK G L++ARR+F + E + VS NSM+ Y QH G +AL L+ M +
Sbjct: 178 ALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI 237
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK-LTDAE 491
T SVL+A + + G ++ + + G+ S +IDL + G + D
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCR 296
Query: 492 RLIEAMPFNP 501
++ + + NP
Sbjct: 297 KVFDEIS-NP 305
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/711 (63%), Positives = 554/711 (77%), Gaps = 34/711 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
FRQ LKTC+ RDL TGKSLHALY+K+ VP S YLSNHF+LLYSKC LSAA F+ T
Sbjct: 10 NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFSFN L++AYA++ + A QLFD++PQPD VSYNTLI+AYA GDT+ A LF
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+MRE D DGFTLSG+ITA N+ LI+QLH L++ G D Y SV N+L+T YS+NGFL
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA+R+F+ + E +DEVSWNSMVVAY QHREG +AL+L+ EM L +D++TLAS+LTA
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
FT+++DL+GGLQFHA LIKSG+HQNSH+GSGLIDLY+KC G M DC KVF+EI PDLVL
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WNTMISGYS E+ SD+AL CF++L VG+ PDDCS VCVISACSN+ SPS G+Q+H L
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K++I SNRISVNNAL+AMYSKCGNL DA+ LFD MPEHNTVS NSMIAGYAQHG+G ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF+ MLE PTNITF+SVL+ACAHTG+V +G+ YF+MMK FG EPE H+SCMID
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LLGRAGKL++AERLIE +PF+PG +A+KAAN LQL+P NA P
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YVMLANIY+ +G+ ++ A++R+LMRDRGV+KKPG SWIEV +++H+FVAED HPMIK+I
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKI 609
Query: 583 HNYLEEMSRKMKQAGYVP----------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
YLEEM RK+K+ GY P ++E RL HHSEKLAV+FGL+ST GE
Sbjct: 610 QEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGE 669
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PILV KNLRIC DCHNAIK+IS + REITVRD++RFHCFKDG+CSCG YW
Sbjct: 670 PILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 143/303 (47%), Gaps = 37/303 (12%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC---SGDMR--- 284
++ L + DL G HA IKS ++++ + + LY+KC S R
Sbjct: 8 LHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 285 ---DC---------------------MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
DC ++F+E+PQPD V +NT+I+ Y+++ + + A
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD-TQPAFQ 126
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F ++ D + +I+AC ++ L +Q+HAL++ + S +SV NAL+ YS
Sbjct: 127 LFLEMREAFLDMDGFTLSGIITAC-GINVGLIRQLHALSVVTGLDS-YVSVGNALITSYS 184
Query: 381 KCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
K G L++ARR+F + E + VS NSM+ Y QH G +AL L+ M + T
Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLA 244
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK-LTDAERLIEAMP 498
SVL+A + + G ++ + + G+ S +IDL + G + D ++ + +
Sbjct: 245 SVLTAFTNVQDLLGGLQFHAKLIKS-GYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS 303
Query: 499 FNP 501
NP
Sbjct: 304 -NP 305
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/712 (62%), Positives = 540/712 (75%), Gaps = 35/712 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+FR +L V RDL TGKSLHALY+K++V S YLSNHF+ LYSKCGCLS A AF+ T
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NVFS+NV++ AYA+ +I ARQLFD+ PQPD VSYNTLIS YAD +T +A+ LFK
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
MRE F+ DGFTLSGLI A + + LIKQLHC A+ GFD Y+SVNN+ +T YS+ G L
Sbjct: 130 RMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA VFY M ++DEVSWNSM+VAYGQH+EG +AL L++EM+ +DM+TLAS+L A
Sbjct: 190 REAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG--DMRDCMKVFEEIPQPDL 298
TSL+ L+GG QFH LIK+GFHQNSH+GSGLID Y+KC G M D KVF+EI PDL
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDL 309
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
VLWNTMISGYS EE+S++A+ F+++ R+G+ PDDCSFVCV SACSNL SPS GKQIH
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK I SNRISVNNAL+++Y K GNL DARR+FDRMPE N VS N MI GYAQHG G
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EALRL++ ML++ I P NITFV++LSACAH GKV EGQKYF+ MK+ F EPE EHYSCM
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCM 489
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNA 520
IDLLGRAGKL +AER I+AMP+ PGS+A +AA + ++P A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAA 549
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
PYVMLAN+YA +GKWEE+A++R+ MR + ++KKPG SWIEVKK+ HVFVAED SHPMI+
Sbjct: 550 TPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 581 EIHNYLEEMSRKMKQAGYVPDKE---------------KRLVHHSEKLAVAFGLLSTSYG 625
E++ YLEEM +KMK+ GYV DK+ RL HHSEKLAVAFGL+ST G
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDG 669
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
E I+V+KNLRICGDCHNAIKF+SA+AGREI VRD RFHCFKDG+CSCGDYW
Sbjct: 670 EEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/712 (61%), Positives = 536/712 (75%), Gaps = 35/712 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TFR +L V RDL TGKSLHALY+K++V S YLSNHF+ LYSKCG LS A AF T
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NVFS+NV++ AYA+ +I ARQLFD+IPQPD VSYNTLIS YAD +T +A+ LFK
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
MR+ F+ DGFTLSGLI A + + LIKQLHC ++ GFD Y+SVNN+ +T YS+ G L
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA VFY M E++DEVSWNSM+VAYGQH+EG +AL L++EM+ +DM+TLAS+L A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG--DMRDCMKVFEEIPQPDL 298
TSL+ L+GG QFH LIK+GFHQNSH+GSGLID Y+KC G M D KVF+EI PDL
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V+WNTMISGYS EE S++A+ F+++ R+G+ PDDCSFVCV SACSNL SPS KQIH
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK I SNRISVNNAL+++Y K GNL+DAR +FDRMPE N VS N MI GYAQHG G
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L++ ML++ I P ITFV+VLSACAH GKV EGQ+YF+ MK+ F EPE EHYSCM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNA 520
IDLLGRAGKL +AER I+AMP+ PGS+A +AAN + ++P A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
PYVMLAN+YA + KWEE+A++R+ MR + ++KKPG SWIEVKK+ HVFVAED SHPMI+
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 581 EIHNYLEEMSRKMKQAGYVPDKE---------------KRLVHHSEKLAVAFGLLSTSYG 625
E++ YLEEM +KMK+ GYV DK+ RL HHSEKLAVAFGL+ST G
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDG 669
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
E ++V+KNLRICGDCHNAIKF+SA+AGREI VRD RFHCFKDG+CSCGDYW
Sbjct: 670 EELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/620 (66%), Positives = 477/620 (76%), Gaps = 46/620 (7%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
FR +LKTC+ RDL TGKSLH+LY+K+ +P S Y SNHFILLYSKCG L+ A AF
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NVFSFN ++AAYA++ R A QLFDQIP+PDLVSYNTLISAYADCG+T AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
MRE D DGFTLS +ITA +++ LI QLH +A+ GFD Y SVNN+LLT Y +NG LD
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+AKRVFY MG I+DEVSWNSM+VAYGQH+EG +AL LFQEMV L +DM+TLAS+LTAF
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T LEDL GGLQFH LIK+GFHQNSH+GSGLIDLY+KC G M DC KVFEEI +PDLVLW
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
NTM+SGYSQ EE+ + AL CF+++ +GY P+DCSFVCVISACSNL SPS GKQIH+L +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K RLFDRM EHNTVSLNSMIAGYAQHGI ME+L
Sbjct: 371 K----------------------------RLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 402
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+WMLE I PT+ITF+SVLSACAHTG+V EG YF+MMK+ F EPE EHYSCMIDL
Sbjct: 403 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 462
Query: 481 LGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPY 523
LGRAGKL++AE LI MPFNPGSI A+KAAN LQLEPSNA PY
Sbjct: 463 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 522
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YA++G+WEEVAT+R+ MRDRGV+KKPG SWIEVKK++HVFVAED SHPMIKEI+
Sbjct: 523 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIY 582
Query: 584 NYLEEMSRKMKQAGYVPDKE 603
+LEEMS KMK+AGYVPD E
Sbjct: 583 EFLEEMSGKMKRAGYVPDGE 602
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----- 280
Q+ + +L + DL G H+ IKS +++ + I LY+KC
Sbjct: 3 QISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWA 62
Query: 281 ----GDMRD---------------------CMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
D+ D ++F++IP+PDLV +NT+IS Y+ E +
Sbjct: 63 RKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-T 121
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
ALG F + +G D + VI+AC + +G Q+H++ + S +SVNNAL
Sbjct: 122 APALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIG-QLHSVAVSSGFDS-YVSVNNAL 179
Query: 376 VAMYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
+ Y K G+L+DA+R+F M + VS NSMI Y QH G +AL LF+ M+ +
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR-AGKLTDAERL 493
T SVL+A ++ G ++ + GF S +IDL + G ++D ++
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 494 IEAM 497
E +
Sbjct: 299 FEEI 302
>gi|255579519|ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529850|gb|EEF31782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/467 (67%), Positives = 378/467 (80%), Gaps = 2/467 (0%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TFR +LK C+ +DL+ GKSL+ LYLK+L+P S YLSNHFI+LYSKC L+ AHHAFNQ
Sbjct: 10 TFRHLLKECIANKDLLIGKSLYTLYLKSLLPPSTYLSNHFIILYSKCNRLTLAHHAFNQN 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFSFNVLL AYA++ AR LFDQIPQPD +SYNTLI+AYADCGD+ +AL LF+
Sbjct: 70 HEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITAYADCGDSLNALYLFR 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+MRE D DG+TLSG+ITA N++ LI+QLHCLA G D Y SV NS +T Y +NGFL
Sbjct: 130 EMRETGIDMDGYTLSGVITACCNDVNLIRQLHCLAGNYGLDSYVSVKNSFVTYYGKNGFL 189
Query: 181 DEAKRVFYEMG-EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+EA+RVFY + E +D+VSWN+M+VAYG+ REG +AL+LFQEM + +DMYTLAS+LT
Sbjct: 190 EEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRGIDVDMYTLASVLT 249
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
AFT LEDL GG QFHA+LIK+GF++N H+GSGL+DLYAKC G M DC K+F EI +PDLV
Sbjct: 250 AFTCLEDLFGGFQFHANLIKTGFYRNCHVGSGLVDLYAKCGGGMLDCRKIFVEIREPDLV 309
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHAL 358
LWNTMIS YS EE S++ L CF+++ R G+ PDDCSFVCVI ACSNL SPS GKQIHA+
Sbjct: 310 LWNTMISAYSLDEELSEETLDCFRRMQRAGFRPDDCSFVCVIRACSNLSSPSQGKQIHAM 369
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
T+K EI SN+ISVNNALVAMYSKCGNL+DARRLFDRMPEHNTVS NS+IAGYAQHGI E
Sbjct: 370 TVKSEIPSNQISVNNALVAMYSKCGNLQDARRLFDRMPEHNTVSFNSIIAGYAQHGIKTE 429
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+L LFE MLE I PT ITF+SVLSACAHTGKV EG++YF MMK+ F
Sbjct: 430 SLCLFEQMLEIGIAPTRITFISVLSACAHTGKVEEGRRYFDMMKEKF 476
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 48/273 (17%)
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----- 280
Q+ + T +L + +DL+ G + +KS ++++ + I LY+KC+
Sbjct: 3 QISWTLQTFRHLLKECIANKDLLIGKSLYTLYLKSLLPPSTYLSNHFIILYSKCNRLTLA 62
Query: 281 ---------------GDMRDCMK----------VFEEIPQPDLVLWNTMISGYSQKEEYS 315
+ D +F++IPQPD + +NT+I+ Y+ + S
Sbjct: 63 HHAFNQNHEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITAYADCGD-S 121
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
AL F+++ G D + VI+AC N +L +Q+H L + S +SV N+
Sbjct: 122 LNALYLFREMRETGIDMDGYTLSGVITACCN-DVNLIRQLHCLAGNYGLDS-YVSVKNSF 179
Query: 376 VAMYSKCGNLEDARRLF--DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
V Y K G LE+A R+F + + VS N+MI Y + G +AL+LF+ M I
Sbjct: 180 VTYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRGIDV 239
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
T SVL+A F+ ++D+FG
Sbjct: 240 DMYTLASVLTA-------------FTCLEDLFG 259
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/736 (38%), Positives = 422/736 (57%), Gaps = 70/736 (9%)
Query: 7 KTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
K C R+ K LH L +K+L +L N+ I YSK G ++ A H F++ N F
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REK 125
S+N +L+AY++ +++ +++F +P D VS+N+LIS Y G A+ + M ++
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 126 RFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYS-------- 175
+ + T S ++ S+ C L +Q+H + GF Y V +SL+ Y+
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 176 -----------------------RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
R+G + ++KR+F+ M E +D +SW +M+ Q+
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKE-RDSISWTTMITGLIQNGLE 251
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EA+ LF++M + +D YT S+LTA L L G + H +I+SG++ N +GS L
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+D+Y KC +R VF+ + ++V W M+ GY Q +S++A+ F + R G P
Sbjct: 312 VDMYCKCR-SVRYAEAVFKRMANKNVVSWTAMLVGYGQNG-FSEEAVRVFCDMQRNGIEP 369
Query: 333 DDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
DD + VIS+C+NL S G Q H + + S I+V+NAL+ +Y KCG++ED+ +L
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSGLIS-FITVSNALITLYGKCGSIEDSNQL 428
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
FD M + VS ++++GYAQ G E + LFE ML + P +TF++VLSAC+ G V
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488
Query: 452 AEGQKYF-SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK--- 507
GQ+YF SM+KD G P +HY+CMIDL GRAG+L +A+ I MPF+P SI
Sbjct: 489 ERGQQYFESMLKD-HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLL 547
Query: 508 --------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
AA L+L+P N Y++L++IYAA GKW VA +RR MR++G +K
Sbjct: 548 SSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARK 607
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
+PGFSWI+ K ++++F A+D S P +I+ LE+++ KM + GYVPD
Sbjct: 608 EPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSE 667
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
K K L HHSEKLA+AFGLL +G PI V+KNLR+CGDCHNA K+IS I+ REI VRD
Sbjct: 668 KMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAV 727
Query: 662 RFHCFKDGRCSCGDYW 677
RFH FKDG CSCGD+W
Sbjct: 728 RFHLFKDGTCSCGDFW 743
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/738 (38%), Positives = 424/738 (57%), Gaps = 69/738 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+LK C + K+LH+ +K L +L N+ I Y+K G + A F+Q H N
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-- 122
++S+N +L+AY++ R++ LFD +P+ D VS+N+LIS YA CG ++ + M
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 123 REKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ F+ + T S L+ +S C L +Q+H + GF Y V + L+ YS+ G +
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 181 -------------------------------DEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+++KR+F+EM E +D +SW SM+ + Q+
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRE-RDSISWTSMITGFTQN 253
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+A+ +F+EM L +D YT S+LTA + L G Q HA++I++ + N +
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
S L+D+Y KC +++ VF+++ ++V W M+ GY Q YS++A+ F + + G
Sbjct: 314 SALVDMYCKCK-NIKSAEAVFKKMTCKNVVSWTAMLVGYGQ-NGYSEEAVKTFSDMQKYG 371
Query: 330 YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
PDD + VIS+C+NL S G Q HA + + S I+V+NALV +Y KCG++ED+
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS-FITVSNALVTLYGKCGSIEDS 430
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RLF+ + + V+ ++++GYAQ G E + LFE ML + P +TF+ VLSAC+
Sbjct: 431 HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRA 490
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK- 507
G V +G + F M + G P +HY+CMIDL RAG++ +A I MPF+P +I+
Sbjct: 491 GLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWAT 550
Query: 508 ----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
AA ++L+P N YV+L+++YAA GKWEEVA +R+ MRD+G+
Sbjct: 551 LLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGL 610
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
+K+PG SWI+ K Q+HVF A+D S+P +I++ LE+++ KM + GYVPD
Sbjct: 611 RKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGD 670
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
K K L HHSEKLA+AFGLL G PI V+KNLR+C DCHNA K+IS I REI VRD
Sbjct: 671 SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRD 730
Query: 660 TYRFHCFKDGRCSCGDYW 677
T RFH FKDG CSCGD+W
Sbjct: 731 TARFHLFKDGTCSCGDFW 748
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C G L GK +HA ++ + ++++ + +Y KC + +A F +
Sbjct: 277 TFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKM 336
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV S+ +L Y + G +E A+ F
Sbjct: 337 TCKNVVSWTAMLVGYGQN-------------------------------GYSEEAVKTFS 365
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DM++ + D FTL +I++ +N L + Q H A+ G + +V+N+L+T Y + G
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++++ R+F E+ KDEV+W ++V Y Q + E + LF+ M++ L D T +L
Sbjct: 426 SIEDSHRLFNEI-SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVL 484
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + G Q F + + + G + +IDL+++ +G + + ++P P
Sbjct: 485 SACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSR-AGRIEEARNFINKMPFSP 543
Query: 297 DLVLWNTMIS 306
D + W T++S
Sbjct: 544 DAISWATLLS 553
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 133/347 (38%), Gaps = 78/347 (22%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ +C L G HA L + + +SN + LY KCG + +H FN+
Sbjct: 378 TLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI 437
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ ++ L++ YA+ + LF+ + +PD V++ ++SA + G E
Sbjct: 438 SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGN 497
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+F+ M + G++ DHY ++ +SR
Sbjct: 498 QIFESMINEH---------GIVPIQ-------------------DHYT----CMIDLFSR 525
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G ++EA+ +M D +SW +++ + YG G A + E LD +
Sbjct: 526 AGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLME-------LDPHN 578
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
AS + L+ S + G + A+ DMRD K +
Sbjct: 579 TASYV------------------LLSS-----VYAAKGKWEEVARLRKDMRD--KGLRKE 613
Query: 294 PQPDLVLWNTMISGYSQKEE---YSDQALGCFKKLN----RVGYHPD 333
P + + + +S ++ +SDQ +KLN + GY PD
Sbjct: 614 PGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD 660
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/739 (38%), Positives = 414/739 (56%), Gaps = 66/739 (8%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +LK C ++ K LH L LK + +LSN+ I Y K G L+ AHH F+
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N+FS+N +L+ Y++ ++ +Q+F+ +P D VS+N IS YA+ G A+ ++K
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 122 M-REKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ + + T S ++ S C L +Q++ + GF V + L+ Y++ G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 179 FLDEAKRVFYEMGEI------------------------------KDEVSWNSMVVAYGQ 208
+ +AKR F EM E +D +SW M+ Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EAL +F+EM +D +T S+LTA SL L G Q HA++I++ N +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+Y+KC ++ VF+ +PQ +++ W M+ GY Q +S++A+ F ++ R
Sbjct: 308 GSALVDMYSKCR-SIKSAETVFKRMPQKNVISWTAMLVGYGQNG-FSEEAVKIFFEMQRN 365
Query: 329 GYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PDD + VIS+C+NL S G Q H + + S I+V+NAL+ +Y KCG+ E+
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS-FITVSNALITLYGKCGSTEN 424
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ RLF M + VS +++AGYAQ G E + LFE ML + P +TF+ VLSAC+
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR 484
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
G V +G +YF M G P +H +C+IDLLGRAG+L +A I MP +P +
Sbjct: 485 AGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWA 544
Query: 508 -----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
AA+ + LEP N YV+L+++YA+ GKW++VA +RR MRD+
Sbjct: 545 TLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKR 604
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K+PG+SWI+ K ++HVF A+D S P + +I+ LE+++ KM + GYVPD
Sbjct: 605 VRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVE 664
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
K K L HHSEKLA+AFGL+ G PI V+KNLR+CGDCHNA KFIS I REI VR
Sbjct: 665 ESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVR 724
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFH FKDG CSCGD+W
Sbjct: 725 DAVRFHLFKDGTCSCGDFW 743
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/731 (37%), Positives = 401/731 (54%), Gaps = 67/731 (9%)
Query: 11 GRRDLVTGKSLHALYLKNLVPFS-AYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFN 69
GR + ++H L LK + +L NH + Y+K G L+ A F++ N+F+ N
Sbjct: 24 GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83
Query: 70 VLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFD 128
LL+A A + +LF +P+ D VSYN LI+ ++ G ++ L++ + RE+
Sbjct: 84 ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
TLS +I +S ++ L +HC + GF YA V + L+ Y++ G + +A+RV
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203
Query: 187 FYEMGEI------------------------------KDEVSWNSMVVAYGQHREGLEAL 216
F EM +D ++W +MV Q+ LEAL
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
+F+ M + +G+D YT SILTA +L L G Q HA++ ++ + N +GS L+D+Y
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
+KC +R VF + +++ W MI GY Q S++A+ F ++ G PDD +
Sbjct: 324 SKCRS-IRLAEAVFRRMTCRNIISWTAMIVGYGQNA-CSEEAVRAFSEMQMDGIKPDDFT 381
Query: 337 FVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
VIS+C+NL S G Q H L + + I+V+NALV +Y KCG++EDA RLFD M
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLAL-VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
H+ VS +++ GYAQ G E + LFE ML + P +TF+ VLSAC+ G V +G
Sbjct: 441 SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGC 500
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------ 503
YF M+ G P +HY+CMIDL R+G+ +AE I+ MP +P +
Sbjct: 501 DYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560
Query: 504 -----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
I AA + L+ +P N YV+L +++AA G+W EVA +RR MRDR V+K+PG S
Sbjct: 561 RGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCS 620
Query: 559 WIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRL 606
WI+ K ++H+F A+D SHP I+ LE ++ KM + GY P DK +
Sbjct: 621 WIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMI 680
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
HHSEKLA+AFGL+ PI ++KNLR+C DCHNA KFIS I GR+I VRD RFH F
Sbjct: 681 SHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKF 740
Query: 667 KDGRCSCGDYW 677
DG CSCGD+W
Sbjct: 741 SDGTCSCGDFW 751
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +HA + + ++ + + +YSKC + A F +
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ +S+ +I Y +E A+ F
Sbjct: 340 TCRNI-------------------------------ISWTAMIVGYGQNACSEEAVRAFS 368
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D FTL +I++ +N L + Q HCLA+ G Y +V+N+L+T Y + G
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VSW ++V Y Q + E + LF++M++ L D T +L
Sbjct: 429 SIEDAHRLFDEM-SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVL 487
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-P 296
+A + + G + + K G + +IDLY++ SG ++ + +++P P
Sbjct: 488 SACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSR-SGRFKEAEEFIKQMPHSP 546
Query: 297 DLVLWNTMIS 306
D W T++S
Sbjct: 547 DAFGWATLLS 556
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/738 (38%), Positives = 413/738 (55%), Gaps = 74/738 (10%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++LK C RD K +H +K +L N+ + Y+K ++ A F+Q
Sbjct: 20 ELLKHC---RDT---KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR 73
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM- 122
N++S+N LL++Y++ + ++F +P D+VS+N+LISAYA G ++ + M
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 123 REKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF- 179
F+ + LS ++ +S C L Q+H + GF Y V + L+ YS+ G
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 180 ------------------------------LDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+++++++FY+M E KD +SW +M+ + Q+
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQE-KDSISWTAMIAGFTQN 252
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
EA+ LF+EM L +D YT S+LTA + L G Q HA++I++ + N +G
Sbjct: 253 GLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVG 312
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
S L+D+Y KC ++ VF ++ ++V W M+ GY Q YS++A+ F + G
Sbjct: 313 SALVDMYCKCKS-IKSAETVFRKMNCKNVVSWTAMLVGYGQN-GYSEEAVKIFCDMQNNG 370
Query: 330 YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
PDD + VIS+C+NL S G Q H + + S I+V+NALV +Y KCG++ED+
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS-FITVSNALVTLYGKCGSIEDS 429
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RLF M + VS ++++GYAQ G E LRLFE ML P +TF+ VLSAC+
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK- 507
G V +G + F M P +HY+CMIDL RAG+L +A + I MPF+P +I
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549
Query: 508 ----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
AA L+LEP N Y++L++IYAA GKWEEVA +R+ MRD+G+
Sbjct: 550 LLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
+K+PG SWI+ K Q+H+F A+D S+P +I++ LE+++ KM Q GYVPD
Sbjct: 610 RKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDD 669
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
K K L HHSEKLA+AFGL+ G PI V+KNLR+CGDCHNA K+IS I REI VRD
Sbjct: 670 SEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRD 729
Query: 660 TYRFHCFKDGRCSCGDYW 677
RFH FKDGRCSCGD+W
Sbjct: 730 AARFHLFKDGRCSCGDFW 747
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 41/312 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C G L GK +HA ++ + ++ + + +Y KC + +A F +
Sbjct: 276 TFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKM 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV S+ +L Y + G +E A+ +F
Sbjct: 336 NCKNVVSWTAMLVGYGQN-------------------------------GYSEEAVKIFC 364
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DM+ + D FTL +I++ +N L + Q HC A+ G + +V+N+L+T Y + G
Sbjct: 365 DMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCG 424
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++++ R+F EM + DEVSW ++V Y Q + E L+LF+ M++ D T +L
Sbjct: 425 SIEDSHRLFSEMSYV-DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVL 483
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG---SGLIDLYAKCSGDMRDCMKVFEEIP- 294
+A + + G Q +IK H+ I + +IDL+++ +G + + K ++P
Sbjct: 484 SACSRAGLVQKGNQIFESMIKE--HRIIPIEDHYTCMIDLFSR-AGRLEEARKFINKMPF 540
Query: 295 QPDLVLWNTMIS 306
PD + W +++S
Sbjct: 541 SPDAIGWASLLS 552
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 287/773 (37%), Positives = 418/773 (54%), Gaps = 100/773 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L+T V +D G+S+H +K + YL N+ + Y+K G L AHH F++
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ FS+N L++ YA+Q +R+L ++P D VS+ +I Y G ++A+ +F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M +R FT+S +++ A++ L + +++H + G V SLL Y++ G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 180 LDEAKRVF------------------------------YEMGEIKDEVSWNSMVVAYGQH 209
AK VF +E +D VSWNSM+ Y Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 210 REGLEALQLFQEMVS-LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
LEAL +F +M++ L D +TLASIL+A +LE L G Q HA+++++ + +
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 269 GSGLIDLYAKCSG--------------------------------DMRDCMKVFEEIPQP 296
G+ LI +YAK G +++ ++F ++
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D+V W MI GY Q ++D AL F+ + G P+ + ++S S+L+ GKQI
Sbjct: 373 DVVAWTAMIVGYVQNGLWND-ALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQH 413
HA IK S+ SV NAL+AMY+K GN+ A+R+FD +P + VS SMI AQH
Sbjct: 432 HASAIKAG-ESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EA+ LFE ML + P +IT+V VLSAC H G V +G+KY++MM ++ EP H
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSH 549
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLE 516
Y+CMIDL GRAG L +A IE+MP P +IA AA L ++
Sbjct: 550 YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ Y+ LAN+Y+A GKWE A R+LM+DRGV+K+ G SWI +K ++H F ED H
Sbjct: 610 PGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIH 669
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P EI+ + E+ ++K+ G++PD KE+ L +HSEKLA+AFGLL+T
Sbjct: 670 PQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPE 729
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +MKNLR+C DCH+AIKFIS + GREI VRD RFH FKDG CSC DYW
Sbjct: 730 NTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 287/773 (37%), Positives = 418/773 (54%), Gaps = 100/773 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L+T V +D G+S+H +K + YL N+ + Y+K G L AHH F++
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ FS+N L++ YA+Q +R+L ++P D VS+ +I Y G ++A+ +F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M +R FT+S +++ A++ L + +++H + G V SLL Y++ G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 180 LDEAKRVF------------------------------YEMGEIKDEVSWNSMVVAYGQH 209
AK VF +E +D VSWNSM+ Y Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 210 REGLEALQLFQEMVS-LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
LEAL +F +M++ L D +TLASIL+A +LE L G Q HA+++++ + +
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 269 GSGLIDLYAKCSG--------------------------------DMRDCMKVFEEIPQP 296
G+ LI +YAK G +++ ++F ++
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D+V W MI GY Q ++D AL F+ + G P+ + ++S S+L+ GKQI
Sbjct: 373 DVVAWTAMIVGYVQNGLWND-ALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQH 413
HA IK S+ SV NAL+AMY+K GN+ A+R+FD +P + VS SMI AQH
Sbjct: 432 HASAIKAG-ESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EA+ LFE ML + P +IT+V VLSAC H G V +G+KY++MM ++ EP H
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSH 549
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLE 516
Y+CMIDL GRAG L +A IE+MP P +IA AA L ++
Sbjct: 550 YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ Y+ LAN+Y+A GKWE A R+LM+DRGV+K+ G SWI +K ++H F ED H
Sbjct: 610 PGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIH 669
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P EI+ + E+ ++K+ G++PD KE+ L +HSEKLA+AFGLL+T
Sbjct: 670 PQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPE 729
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +MKNLR+C DCH+AIKFIS + GREI VRD RFH FKDG CSC DYW
Sbjct: 730 NTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/709 (37%), Positives = 401/709 (56%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F V+K C + DL G+ +H + + +Y+KCG L
Sbjct: 122 VFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLE--------- 172
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ARQ+FD++P+ D+VS+N +I+ Y+ G AL+LF
Sbjct: 173 ----------------------NARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFS 210
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ + TL ++ ++ L L KQ+HC AI G + V N L+ Y++ G
Sbjct: 211 EMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCG 270
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A ++F M I+D SWN+++ Y + + EAL F M + + T+ S+L
Sbjct: 271 NVNTAHKLFERM-PIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVL 329
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L L G Q H + I+SGF N +G+ L+++YAKC G++ K+FE +P+ ++
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC-GNVNSAYKLFERMPKKNV 388
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHA 357
V WN +ISGYSQ + +AL F ++ G PD + V V+ AC++ L+ GKQIH
Sbjct: 389 VAWNAIISGYSQ-HGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHG 447
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
TI+ SN + V LV +Y+KCGN+ A++LF+RMPE + VS +MI Y HG G
Sbjct: 448 YTIRSGFESN-VVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGE 506
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL LF M ET +I F ++L+AC+H G V +G +YF MK +G P+ EHY+C+
Sbjct: 507 DALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACL 566
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLLGRAG L +A +I+ M P + + +AA H +L+P NA
Sbjct: 567 VDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNA 626
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+NIYA + +WE+VA +R++M+++GV+K+PG S + V + + F+ D +HP +
Sbjct: 627 GYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSE 686
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ LE + +M++AGYVP+ KE L HSEKLA++FG+++TS G PI
Sbjct: 687 QIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPI 746
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLR+C DCHNA KFIS I GREI VRD RFH K+G CSCGDYW
Sbjct: 747 RIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 233/439 (53%), Gaps = 17/439 (3%)
Query: 72 LAAYARQLRIASARQLF-----DQIPQPDL----VSYNTLISAYADCGDTESALSLFKDM 122
+ A R+ ++ + R++ Q Q D+ V + I Y G AL L+ M
Sbjct: 52 VVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQM 111
Query: 123 REKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + D +I A S ++L +++H I GF+ V +L + Y++ G L
Sbjct: 112 QRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSL 171
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+ A++VF M + +D VSWN+++ Y Q+ + EAL LF EM + + TL S++
Sbjct: 172 ENARQVFDRMPK-RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV 230
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L L G Q H + I+SG + + +GL+++YAKC G++ K+FE +P D+
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKC-GNVNTAHKLFERMPIRDVAS 289
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WN +I GYS ++ + AL F ++ G P+ + V V+ AC++L + G+QIH
Sbjct: 290 WNAIIGGYSLNSQHHE-ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYA 348
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I+ SN + V NALV MY+KCGN+ A +LF+RMP+ N V+ N++I+GY+QHG EA
Sbjct: 349 IRSGFESNDV-VGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEA 407
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF M I P + VSVL ACAH + +G++ GFE + ++D
Sbjct: 408 LALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS-GFESNVVVGTGLVD 466
Query: 480 LLGRAGKLTDAERLIEAMP 498
+ + G + A++L E MP
Sbjct: 467 IYAKCGNVNTAQKLFERMP 485
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 30/393 (7%)
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+ V W ++ Y ++ +AL+L+ +M + D S++ A S DL G + H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+I GF + +G+ L +Y KC G + + +VF+ +P+ D+V WN +I+GYSQ +
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKC-GSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ- 201
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNN 373
+AL F ++ G P+ + V V+ C++ L+ GKQIH I+ I S+ + V N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV-N 260
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
LV MY+KCGN+ A +LF+RMP + S N++I GY+ + EAL F M I P
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+IT VSVL ACAH + +GQ+ GFE + ++++ + G + A +L
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAYKL 379
Query: 494 IEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
E MP N V + + + Y+ G E + M+ +G+ K
Sbjct: 380 FERMP------------------KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI-K 420
Query: 554 KPGFSWIEVKKQ-MHVFVAEDGSHPMIKEIHNY 585
F+ + V H E G K+IH Y
Sbjct: 421 PDSFAIVSVLPACAHFLALEQG-----KQIHGY 448
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
T+ ++R N++ + S C N + R +N V I GY ++G +
Sbjct: 51 TVVAQLRRNKVKTTREV----SACANQTQFTQTDIR---NNAVVWKETIIGYVKNGFWNK 103
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF--GFEPEGEHYSC 476
ALRL+ M T I P + F+SV+ AC + G+K + +D+ GFE + +
Sbjct: 104 ALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK---VHEDIIARGFESDVIVGTA 160
Query: 477 MIDLLGRAGKLTDAERLIEAMP 498
+ + + G L +A ++ + MP
Sbjct: 161 LASMYTKCGSLENARQVFDRMP 182
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/731 (37%), Positives = 399/731 (54%), Gaps = 67/731 (9%)
Query: 11 GRRDLVTGKSLHALYLKNLVPFS-AYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFN 69
GR + ++H L LK + +L NH + Y+K G L+ A F++ N+F+ N
Sbjct: 24 GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83
Query: 70 VLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFD 128
LL+A A + +LF +P+ D VSYN LI+ ++ G ++ L++ + RE+
Sbjct: 84 ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
TLS +I +S ++ L +HC + GF YA V + L+ Y++ G + +A+RV
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203
Query: 187 FYEMGEI------------------------------KDEVSWNSMVVAYGQHREGLEAL 216
F EM +D ++W +MV Q+ LEAL
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
+F+ M + +G+D YT SILTA +L G Q HA++ ++ + N +GS L+D+Y
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
+KC +R VF + +++ W MI GY Q S++A+ F ++ G PDD +
Sbjct: 324 SKCRS-IRLAEAVFRRMTCRNIISWTAMIVGYGQNA-CSEEAVRAFSEMQMDGIKPDDFT 381
Query: 337 FVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
VIS+C+NL S G Q H L + + I+V+NALV +Y KCG++EDA RLFD M
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLAL-VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
H+ VS +++ GYAQ G E + LFE ML + P +TF+ VLSAC+ G V +G
Sbjct: 441 SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGC 500
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------ 503
YF M+ P +HY+CMIDL R+G+ +AE I+ MP +P +
Sbjct: 501 DYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560
Query: 504 -----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
I AA + L+ +P N YV+L +++AA G+W EVA +RR MRDR V+K+PG S
Sbjct: 561 RGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCS 620
Query: 559 WIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRL 606
WI+ K ++H+F A+D SHP I+ LE ++ KM + GY P DK +
Sbjct: 621 WIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMI 680
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
HHSEKLA+AFGL+ PI ++KNLR+C DCHNA KFIS I GR+I VRD RFH F
Sbjct: 681 SHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKF 740
Query: 667 KDGRCSCGDYW 677
DG CSCGD+W
Sbjct: 741 SDGTCSCGDFW 751
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 139/312 (44%), Gaps = 41/312 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C GK +HA + + ++ + + +YSKC + A F +
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ +S+ +I Y +E A+ F
Sbjct: 340 TCRNI-------------------------------ISWTAMIVGYGQNACSEEAVRAFS 368
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D FTL +I++ +N L + Q HCLA+ G Y +V+N+L+T Y + G
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VSW ++V Y Q + E + LF++M+ L D T +L
Sbjct: 429 SIEDAHRLFDEM-SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVL 487
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG---SGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+A + + G + + K H I + +IDLY++ SG ++ + +++P
Sbjct: 488 SACSRAGLVEKGCDYFDSMQKD--HDIVPIDDHYTCMIDLYSR-SGRFKEAEEFIKQMPH 544
Query: 296 -PDLVLWNTMIS 306
PD W T++S
Sbjct: 545 SPDAFGWATLLS 556
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/737 (36%), Positives = 404/737 (54%), Gaps = 68/737 (9%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L + R + +LH + L+ L P YL NH + Y K G + A F+ H N
Sbjct: 12 LLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPN 71
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-- 122
+F++N LL+ A ++ LF + Q D+VSYN +I+ ++ G A+ ++ +
Sbjct: 72 LFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQ 131
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ T+S ++ A+S + L KQ HC + GF A V + L+ Y++ +
Sbjct: 132 ADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLV 191
Query: 181 DEAKRVF------------------------------YEMGEIKDEVSWNSMVVAYGQHR 210
+AKR F +E+ +D ++W +MV + Q+
Sbjct: 192 GDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNG 251
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EAL++F+ M + +D YT SILTA +L L G Q HA++I++ + N +GS
Sbjct: 252 LESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGS 311
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
L+D+Y+KC ++ VF + +++ W +I GY Q S++A+ F ++ R G
Sbjct: 312 ALVDMYSKCRS-IKLAETVFRRMTCKNIISWTALIVGYGQNG-CSEEAVRVFSEMQRDGI 369
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PDD + VIS+C+NL S G Q H L + + + I+V+NALV +Y KCG++EDA
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLAL-VSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
RLFD M H+ VS ++++GYAQ G E + LFE ML + P +TF+ VLSAC+ G
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-- 507
V +G+ YF M+ G P +HY+CMIDL R+GKL +AE I+ MP +P +I
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTL 548
Query: 508 ---------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA + L+++P N YV+L +++AA G+W EVA +RR MRDR V+
Sbjct: 549 LSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVK 608
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------ 600
K+PG SWI+ K ++H+F A+D SHP K I+ LE ++ KM + GY P
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADT 668
Query: 601 DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
DK + HHSEKLA+AFGL+ PI ++KNLR+C DCHNA KFIS I GR+I VRD
Sbjct: 669 DKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDA 728
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH F DG CSCGD+W
Sbjct: 729 VRFHKFSDGVCSCGDFW 745
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +HA ++ + ++ + + +YSKC + A F +
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ +S+ LI Y G +E A+ +F
Sbjct: 334 TCKNI-------------------------------ISWTALIVGYGQNGCSEEAVRVFS 362
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D D +TL +I++ +N L + Q HCLA+ G HY +V+N+L+T Y + G
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VSW ++V Y Q E + LF++M++ + D T +L
Sbjct: 423 SIEDAHRLFDEM-SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVL 481
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + G FH+ G + +IDLY++ SG +++ + +++P P
Sbjct: 482 SACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSR-SGKLKEAEEFIKQMPMHP 540
Query: 297 DLVLWNTMISG 307
D + W T++S
Sbjct: 541 DAIGWGTLLSA 551
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/773 (35%), Positives = 424/773 (54%), Gaps = 100/773 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ L+ + +D TGKS+HA +K + +L N+ + Y+K G + AH F++
Sbjct: 16 YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VFS+N++L+ YA+ R+ A ++F+++P+PD VS+ +I Y G E+A+ +F++
Sbjct: 76 VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFRE 135
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG- 178
M FTL+ ++ + + CL +++H + G Y SV NSLL Y+++G
Sbjct: 136 MVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGD 195
Query: 179 ------------------------------FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+D A+ F +M E +D VSWN+M+ Y Q
Sbjct: 196 PVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIE-RDVVSWNAMISGYNQ 254
Query: 209 HREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
H EAL +F +M+ D +TLAS L+A +LE+L G Q HAH+I++ F
Sbjct: 255 HGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGA 314
Query: 268 IGSGLIDLYAKCSG--------------------------------DMRDCMKVFEEIPQ 295
+G+ LI +Y+K G D+ ++F+ +
Sbjct: 315 VGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRV 374
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D+V W MI GY Q ++ A+ F+ + + G P++ + ++S S+L+ G+Q
Sbjct: 375 RDVVAWTAMIVGYVQNG-FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQ 433
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
IHA + ++ +SV+NAL+ MY+K G++ DAR +F+ + + +T++ SMI AQH
Sbjct: 434 IHASATR-SGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQH 492
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EAL LFE MLE I P +IT+V VLSAC H G V +G+ Y+++M++ P H
Sbjct: 493 GLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSH 552
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLE 516
Y+CMIDL GRAG L +A IE MP P IA AA L +E
Sbjct: 553 YACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIE 612
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ Y LAN+Y+A G+WE A IR+ M+D+GV+K GFSW+++K ++H+F +DG H
Sbjct: 613 PENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLH 672
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P I+ + ++ +++K+ G+VPD KE+ L HHSEKLA+AFGL+ T
Sbjct: 673 PQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPE 732
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +MKNLR+C DCH+AIKFIS + GREI VRD RFH FK+G CSC DYW
Sbjct: 733 NTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 161/316 (50%), Gaps = 15/316 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C +L GK +HA ++ + N I +YSK G + A Q+
Sbjct: 280 TLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQS 339
Query: 61 QHAN--VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+N V +F LL Y + I AR++FD + D+V++ +I Y G + A+ L
Sbjct: 340 MISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMEL 399
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M ++ + +TL+ +++ SS+ L +Q+H A G SV+N+L+T Y++
Sbjct: 400 FRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAK 459
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G +++A+ VF + +D ++W SM++A QH G EAL LF+ M+ + D T
Sbjct: 460 SGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVG 519
Query: 237 ILTAFTSLEDLVGGLQFH-----AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+L+A T + + G ++ AH I SH +IDL+ + +G +++ E
Sbjct: 520 VLSACTHVGLVEQGRSYYNLMQNAHKI---IPTPSHYAC-MIDLFGR-AGLLQEAHAFIE 574
Query: 292 EIP-QPDLVLWNTMIS 306
+P +PD++ W ++++
Sbjct: 575 NMPIEPDVIAWGSLLA 590
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 69/343 (20%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D YT S L +D G HA +IK+G H + + L++ YAK +G + D +V
Sbjct: 14 DPYT--SFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAK-TGFIYDAHRV 70
Query: 290 FEEIPQPDLVLWNTMISGYSQK----------EEYS--------------------DQAL 319
F+E+P + WN ++SGY++ EE + A+
Sbjct: 71 FDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAI 130
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAM 378
G F+++ P + V+++C+ + +G+++H+ +K + S+ ISV N+L+ M
Sbjct: 131 GMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGL-SSYISVANSLLNM 189
Query: 379 YSKCGNLEDARRLFDRMP-------------------------------EHNTVSLNSMI 407
Y+K G+ A+ +FDRM E + VS N+MI
Sbjct: 190 YAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMI 249
Query: 408 AGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+GY QHG EAL +F ML +++ P T S LSACA+ + G++ + +
Sbjct: 250 SGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT-E 308
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIE-AMPFNPGSIALKA 508
F+ G + +I + ++G + A+++IE +M N IA A
Sbjct: 309 FDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTA 351
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/716 (38%), Positives = 399/716 (55%), Gaps = 74/716 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C+ L + +H +K + + ++S + +YSKCG
Sbjct: 185 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG------------ 232
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ AR LFD + + D+V +N ++ Y G + A LF
Sbjct: 233 -------------------RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 273
Query: 121 DMREKRFDTDGFT----LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ D F+ L+G + A +++L L KQ+H +A+ G D SV NSL+ YS+
Sbjct: 274 EFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK 333
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G A+ VF +M + D +SWNSM+ + Q E++ LF +++ L D +TLAS
Sbjct: 334 MGCAYFAREVFNDMKHL-DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392
Query: 237 ILTAFTS-----LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
I A + L L G Q HAH IK+GF + H+ SG++D+Y KC GDM + VF
Sbjct: 393 ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC-GDMVNAGIVFN 451
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
I PD V W +MISG DQAL + ++ + PD+ +F +I A S ++
Sbjct: 452 YISAPDDVAWTSMISGCVDNGN-EDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 510
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+Q+HA IK++ S+ V +LV MY+KCGN+EDA RLF +M N N+M+ G
Sbjct: 511 QGRQLHANVIKLDCVSDPF-VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 569
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQHG EA+ LF+ M I P ++F+ +LSAC+H G +E +Y M + +G EPE
Sbjct: 570 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 629
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFL 513
EHYSC++D LGRAG + +A+++IE MPF + + A
Sbjct: 630 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 689
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
LEP ++ YV+L+NIYAA+ +W++V R++M+ + V+K PGFSWI+VK +H+FV +D
Sbjct: 690 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDD 749
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
SHP I++ +EEM + +++ GYVPD KE+ L +HSEKLA+A+GL+S
Sbjct: 750 RSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLIS 809
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T I V+KNLR+CGDCHNAIK+IS + REI +RD RFH F+DG CSCGDYW
Sbjct: 810 TPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 7/218 (3%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L S +L+ G HA ++ SG + + + L+ +Y+KC G + +VF+ P+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKC-GSLSSARQVFDTTPER 141
Query: 297 DLVLWNTMISGYSQKEEYSD----QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
DLV WN ++ Y+ + +D + L F+ L + V+ C N
Sbjct: 142 DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 201
Query: 353 KQ-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
+ +H IKI + + + V+ ALV +YSKCG + DAR LFD M E + V N M+ GY
Sbjct: 202 AEGVHGYAIKIGLEWD-VFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 260
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
Q G+ EA +LF + + P + +L+ C G
Sbjct: 261 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAG 298
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 288/758 (37%), Positives = 408/758 (53%), Gaps = 100/758 (13%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
T + +H +K+ + FS YL N+ + +YSK G A F++ FS+N +L+AYA
Sbjct: 32 TAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYA 91
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
++ + S+ + FD++PQ D VS+ T+I Y + G A+ + +M + + FTL+
Sbjct: 92 KRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTN 151
Query: 137 LITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM---- 190
++ + + CL K++H + G SV+NSLL Y++ G AK VF M
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211
Query: 191 --------------GEI------------KDEVSWNSMVVAYGQHREGLEALQLFQEMV- 223
G++ +D V+WNSM+ Y Q L AL +F +M+
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG-- 281
L D +TLAS+L+A +LE L G Q H+H++ +GF + + + LI +Y++C G
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 282 ------------------------------DMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
DM + +F+ + D+V W MI GY Q
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQH 391
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKI-EIRSNRI 369
Y +A+ F+ + P+ + ++S S+L S GKQIH +K EI S +
Sbjct: 392 GLYG-EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS--V 448
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
SV+NAL+ MY+K G++ A R FD + E +TVS SMI AQHG EAL LFE ML
Sbjct: 449 SVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ P +IT+V V SAC H G V +G++YF MMKD+ P HY+CM+DL GRAG L
Sbjct: 509 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 568
Query: 489 DAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYA 531
+A+ IE MP P + AA L LEP N+ Y LAN+Y+
Sbjct: 569 EAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSR 591
A GKWEE A IR+ M+D V+K+ GFSWIEVK ++H F EDG HP EI+ ++++
Sbjct: 629 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWD 688
Query: 592 KMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
++K+ GYVPD KE+ L HHSEKLA+AFGL+ST + +MKNLR+C D
Sbjct: 689 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCND 748
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CH AIKFIS + GREI VRDT RFH FKDG CSC DYW
Sbjct: 749 CHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 197/452 (43%), Gaps = 110/452 (24%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM----------- 190
SN + +HC I G + N+L+ YS+ G+ A+++F EM
Sbjct: 27 SNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTV 86
Query: 191 -------GEI------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
G++ +D VSW +M+V Y + +A+++ EM+ +
Sbjct: 87 LSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQ 146
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----------- 280
+TL ++L + + L G + H+ ++K G N + + L+++YAKC
Sbjct: 147 FTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDR 206
Query: 281 -------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
G M M FE++ + D+V WN+MISGY+Q+ Y +AL
Sbjct: 207 MVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQR-GYDLRALDM 265
Query: 322 FKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F K+ R PD + V+SAC+NL +G+QIH+ + + I V NAL++MY
Sbjct: 266 FSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGI-VLNALISMY 324
Query: 380 SKCGNLEDARRL---------------------------------FDRMPEHNTVSLNSM 406
S+CG +E ARRL FD + + + V+ +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAM 384
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMF 465
I GY QHG+ EA+ LF M+ P + T ++LS + + G Q + S +K
Sbjct: 385 IVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK--- 441
Query: 466 GFEPEGEHYS-----CMIDLLGRAGKLTDAER 492
GE YS +I + +AG +T A R
Sbjct: 442 ----SGEIYSVSVSNALITMYAKAGSITSASR 469
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 179/376 (47%), Gaps = 15/376 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ- 59
T VL C L G+ +H+ + S + N I +YS+CG + A Q
Sbjct: 281 TLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 60 -TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
T+ + F LL Y + + A+ +FD + D+V++ +I Y G A++L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400
Query: 119 FKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + + +TL+ +++ +S+ +L KQ+H A+ G + SV+N+L+T Y++
Sbjct: 401 FRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A R F + +D VSW SM++A QH EAL+LF+ M+ L D T
Sbjct: 461 AGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 237 ILTAFTSLEDLVGGLQFHAHL--IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +A T + G Q+ + + SH ++DL+ + +G +++ + E++P
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC-MVDLFGR-AGLLQEAQEFIEKMP 578
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
+PD+V W +++S Y + LG + P++ SA +NL + GK
Sbjct: 579 IEPDVVTWGSLLSAC---RVYKNIDLGKVAAERLLLLEPENSG---AYSALANLYSACGK 632
Query: 354 QIHALTIKIEIRSNRI 369
A I+ ++ R+
Sbjct: 633 WEEAAKIRKSMKDGRV 648
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/744 (37%), Positives = 404/744 (54%), Gaps = 98/744 (13%)
Query: 30 VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
+ FS YL N+ + LY+K G AH FN+ FS+N +L+ YA+Q ++ A Q+FD
Sbjct: 6 LTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFD 65
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCL 147
IP D VS+ T+I Y G E A+ +F DM + + FTL+ ++ A++ + +
Sbjct: 66 LIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGI 125
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------------- 187
K++H + G V NSLL Y++ G L AK VF
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185
Query: 188 ----------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLAS 236
+E+ +D VSWNSM+ QH EALQ F ++ L D ++LAS
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG--------------- 281
L+A +LE L G Q H +++++ F + +G+ LI +YAK G
Sbjct: 246 ALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISD 305
Query: 282 -----------------DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
D+ ++F + PD+V W MI GY Q +D A+ FK
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNND-AIEVFKT 364
Query: 325 LNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G P+ + ++SA S++ S + GKQIHA I+ + SV NAL MY+K G
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIR-SGEALSPSVGNALTTMYAKAG 423
Query: 384 NLEDARRLFDRMPEH-NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
++ AR++F+ + ++ +TVS SMI AQHG+G EA+ LFE ML I P +IT+V VL
Sbjct: 424 SINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVL 483
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
SAC H G V +G+ YF +MK++ +P HY+CM+DL GRAG L +A + +E MP P
Sbjct: 484 SACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPD 543
Query: 503 SIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
IA AA L +EP+N+ Y LAN+Y++ GKW++ A IR+L
Sbjct: 544 VIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKL 603
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---- 601
M+ RGV+K+ G SW++++ + HVF EDG HP EI+ ++++ +++K+ G+ PD
Sbjct: 604 MKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESV 663
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
K++ L +HSEKLA+AFG++ST + +MKNLR+C DCHNAIKFIS + R
Sbjct: 664 LHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDR 723
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
EI VRD RFH FKDG CSC DYW
Sbjct: 724 EIIVRDATRFHHFKDGSCSCKDYW 747
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 29/323 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ L C L GK +H ++ + S + N I +Y+K G + A Q+
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQS 301
Query: 61 --QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+V +F LL Y + I ARQ+F+ + PD+V++ +I Y G A+ +
Sbjct: 302 GISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEV 361
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M + + FTL+ +++ASS+ L KQ+H AI G SV N+L T Y++
Sbjct: 362 FKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAK 421
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ A++VF + + +D VSW SM++A QH G EA++LF++M++L + D T
Sbjct: 422 AGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVG 481
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSG-----FHQNSH-IGSGL------IDLYAKCSGDMR 284
+L+A T H L++ G +N H I L +DL+ + +G ++
Sbjct: 482 VLSACT-----------HGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGR-AGLLQ 529
Query: 285 DCMKVFEEIP-QPDLVLWNTMIS 306
+ K E +P +PD++ W +++S
Sbjct: 530 EAYKFVENMPMEPDVIAWGSLLS 552
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 152/314 (48%), Gaps = 55/314 (17%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH------LIKSGFHQNSHIGSGLIDL 275
MV L L +Y + +++ + G AH +K+ F N+ I SG
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKT-----GFHLDAHDLFNEMPVKTTFSWNT-ILSG---- 50
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
YAK G + +VF+ IP D V W T+I GY+Q + D A+ F + + P
Sbjct: 51 YAK-QGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFED-AIKIFVDMVKDKVLPTQF 108
Query: 336 SFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ V+++C+ S +GK++H+ +K+ + + + V N+L+ MY+K G+L+ A+ +FDR
Sbjct: 109 TLTNVLASCAATGSRGIGKKVHSFVVKLGLHAC-VPVANSLLNMYAKTGDLKMAKVVFDR 167
Query: 395 MPEHNT-------------------------------VSLNSMIAGYAQHGIGMEALRLF 423
M NT VS NSMIAG QHG EAL+ F
Sbjct: 168 MKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFF 227
Query: 424 EWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLL 481
+L +T++ P + S LSACA+ K++ G++ +++ M F+ G + +I +
Sbjct: 228 SSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTM--FDASGAVGNALISMY 285
Query: 482 GRAGKLTDAERLIE 495
++G + A R+IE
Sbjct: 286 AKSGGVEIARRIIE 299
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/729 (37%), Positives = 408/729 (55%), Gaps = 59/729 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C + + G+ +H++ N V L + + +Y CG L F++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 61 QHANVFSFNVLLAAYA---------------RQL---RIASARQLFDQIPQPDLVSYNTL 102
+ VF +N+L+ YA R+L R+ SAR+LFD++ D++S+N++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGF 160
IS Y G +E L LF+ M +TD T+ ++ SN L L + LH AI F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE--ALQL 218
++NN LL YS++G L+ A +VF MGE + VSW SM+ Y REGL +++L
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGE-RSVVSWTSMIAGYA--REGLSDMSVRL 339
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F EM + D++T+ +IL A L G H ++ ++ + + + L+D+YAK
Sbjct: 340 FHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAK 399
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G M D VF E+ D+V WNTMI GYS K ++AL F ++ + P+ +
Sbjct: 400 C-GSMGDAHSVFSEMQVKDIVSWNTMIGGYS-KNSLPNEALNLFVEM-QYNSKPNSITMA 456
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
C++ AC++L+ G++IH ++ +R V NALV MY KCG L AR LFD +PE
Sbjct: 457 CILPACASLAALERGQEIHGHILRNGFSLDR-HVANALVDMYLKCGALGLARLLFDMIPE 515
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS MIAGY HG G EA+ F M + I P ++F+S+L AC+H+G + EG +
Sbjct: 516 KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGF 575
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F+MM++ EP+ EHY+C++DLL RAG L+ A + I+ MP P +
Sbjct: 576 FNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYH 635
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A K A H +LEP N YV+LANIYA + KWEEV +R + RG++K PG SWI
Sbjct: 636 DVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWI 695
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVH 608
E+K ++H+FV D SHP+ +I L++ +MK+ G+ P +KE L
Sbjct: 696 EIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCG 755
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEK+A+AFG+LS G+ + V KNLR+CGDCH KF+S + R+I +RD+ RFH FKD
Sbjct: 756 HSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKD 815
Query: 669 GRCSCGDYW 677
G CSC +W
Sbjct: 816 GSCSCRGHW 824
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 242/490 (49%), Gaps = 56/490 (11%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYN 100
LY C + + ++T + +N+ + + + A +L +Q P+PD L +Y
Sbjct: 47 LYHSCATIGTSVLP-SETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYC 105
Query: 101 TLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG- 159
+++ AD + + ++ + DG S L+ + + CG
Sbjct: 106 SVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVF--------------MYVTCGD 151
Query: 160 -------FDHYAS----VNNSLLTCYSRNGFLDE------------------AKRVFYEM 190
FD A+ + N L+ Y++ G E A+++F E+
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDEL 211
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
G+ +D +SWNSM+ Y + + L LF++M+ L + D+ T+ S++ ++ L+ G
Sbjct: 212 GD-RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLG 270
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
H + IK+ F + + + L+D+Y+K SG++ ++VFE + + +V W +MI+GY+
Sbjct: 271 RALHGYAIKASFGKELTLNNCLLDMYSK-SGNLNSAIQVFETMGERSVVSWTSMIAGYA- 328
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRI 369
+E SD ++ F ++ + G PD + ++ AC+ GK +H + +++S+ +
Sbjct: 329 REGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD-L 387
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V+NAL+ MY+KCG++ DA +F M + VS N+MI GY+++ + EAL LF M +
Sbjct: 388 FVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QY 446
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
N P +IT +L ACA + GQ+ + ++++ GF + + ++D+ + G L
Sbjct: 447 NSKPNSITMACILPACASLAALERGQEIHGHILRN--GFSLDRHVANALVDMYLKCGALG 504
Query: 489 DAERLIEAMP 498
A L + +P
Sbjct: 505 LARLLFDMIP 514
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 272/649 (41%), Positives = 391/649 (60%), Gaps = 40/649 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++ FS N L+ YA+ + A +FD+I +PD+VS+N +I+ AL L ++M
Sbjct: 144 SDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREM 203
Query: 123 REKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + FTLS + A + L +QLH I + + L+ YS+ +
Sbjct: 204 NKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSM 263
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D+A+ VF M E +D ++WN+++ + Q+ E EA LF M + +G + TL+++L +
Sbjct: 264 DDARLVFKLMPE-RDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+L+ Q HA +KSGF ++++ + LID Y KC G + D +VFEE P DLVL
Sbjct: 323 IAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC-GHVEDATRVFEESPIVDLVL 381
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC--VISACSNLSP-SLGKQIHA 357
+ ++++ Y+Q + ++AL + ++ G PD SFVC +++AC++LS GKQ+H
Sbjct: 382 FTSLVTAYAQDGQ-GEEALRLYLEMQDRGIKPD--SFVCSSLLNACASLSAYEQGKQVHV 438
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K S+ I N+LV MY+KCG++EDA F R+P VS ++MI G AQHG G
Sbjct: 439 HILKFGFMSD-IFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGK 497
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+LF+ ML+ +PP +IT VSVL AC H G VAE + YF+ MK +FG EP EHY+CM
Sbjct: 498 EALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACM 557
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNA 520
IDLLGRAGKL A L+ MPF ++ +AA L LEP +
Sbjct: 558 IDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKS 617
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+LANIYA+ G W++VA +RRLM+D V+K+PG SW+EVK +++ F+ D SH
Sbjct: 618 GTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRST 677
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ L+E+S +K+AGYVP +KE+ L HHSEKLAVAFGL++T G PI
Sbjct: 678 EIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPI 737
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH +KFIS I REI VRDT RFH F++G CSCG+YW
Sbjct: 738 RVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 225/446 (50%), Gaps = 37/446 (8%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ +L L KQ+H + + GFD V NSL+ Y++ G +A+ +F + + + VSWN+
Sbjct: 23 TKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPD-RSVVSWNA 81
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
+ Y EA+ LF +MV + + ++L+S++ T LED V G + H +LIK G
Sbjct: 82 LFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLG 141
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+ ++ + L+D+YAK G + D VF+EI +PD+V WN +I+G EY +AL
Sbjct: 142 YDSDAFSANALVDMYAKV-GILEDASSVFDEIAKPDIVSWNAIIAG-CVLHEYHHRALEL 199
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+++N+ G P+ + + AC+ ++ LG+Q+H+ IK+++ S+ + L+ MYS
Sbjct: 200 LREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF-LGVGLIDMYS 258
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KC +++DAR +F MPE + ++ N++I+G++Q+ EA LF M I T +
Sbjct: 259 KCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLST 318
Query: 441 VL-SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
VL S A Q + +K GFE + + +ID G+ G + DA R+ E P
Sbjct: 319 VLKSIAALQANYMCRQIHALSLKS--GFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI 376
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK----- 554
+ V + L YA G+ EE + M+DRG++
Sbjct: 377 ------------------VDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCS 418
Query: 555 ------PGFSWIEVKKQMHVFVAEDG 574
S E KQ+HV + + G
Sbjct: 419 SLLNACASLSAYEQGKQVHVHILKFG 444
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 224/472 (47%), Gaps = 49/472 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T LK C G G+ LH+ +K + ++L I +YSKC +
Sbjct: 214 TLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMD--------- 264
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR +F +P+ D++++N +IS ++ + E A SLF
Sbjct: 265 ----------------------DARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 121 DMREKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + + TLS ++ + +N +C +Q+H L++ GF+ V NSL+ Y +
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMC--RQIHALSLKSGFEFDNYVVNSLIDTYGK 360
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A RVF E I D V + S+V AY Q +G EAL+L+ EM + D + +S
Sbjct: 361 CGHVEDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSS 419
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A SL G Q H H++K GF + G+ L+++YAKC G + D F IP
Sbjct: 420 LLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKC-GSIEDASCAFSRIPVR 478
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+V W+ MI G +Q Y +AL FK++ +VG P+ + V V+ AC++ + +
Sbjct: 479 GIVSWSAMIGGLAQ-HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY 537
Query: 357 ALTIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH- 413
++KI + + A ++ + + G LE A L ++MP + N + +++ H
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHK 597
Query: 414 --GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+G +A + LE T++ ++ ++ KVA ++ +MKD
Sbjct: 598 NIDLGEQAAEML-LALEPEKSGTHVLLANIYASVGMWDKVARVRR---LMKD 645
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 5/268 (1%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+ S+L A T +DLV G Q H ++ +GF + + + L+ LYAKC G D +F+
Sbjct: 11 FAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG-FGDARSLFD 69
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
IP +V WN + S Y + + +A+ F + G P++ S +I+ C+ L S+
Sbjct: 70 AIPDRSVVSWNALFSCYVHSDMHG-EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128
Query: 352 -GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G++IH IK+ S+ S NALV MY+K G LEDA +FD + + + VS N++IAG
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSA-NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGC 187
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
H AL L M ++ + P T S L ACA G++ S + M +
Sbjct: 188 VLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKM-DMGSD 246
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ID+ + + DA + + MP
Sbjct: 247 SFLGVGLIDMYSKCNSMDDARLVFKLMP 274
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
++ +G ++ +F V+ AC+ LGKQ+H + + S+ V N+LV +Y+KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEF-VANSLVILYAKCG 59
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
DAR LFD +P+ + VS N++ + Y + EA+ LF M+ + I P + S+++
Sbjct: 60 GFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
C +G+K + + G++ + + ++D+ + G L DA + + +
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKL-GYDSDAFSANALVDMYAKVGILEDASSVFDEI 172
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 274/739 (37%), Positives = 404/739 (54%), Gaps = 66/739 (8%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ LK C R+ K LH ++ L +L N+ I Y K G L A + F+
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N+FS+N LL+AY++ + +++FD +P D+VS+N+L+S YA G ++ ++
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 122 M-REKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ + + T S ++ SSN + L +Q+H G+ Y V + L+ Y++ G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 179 FLDEAKRVFYEMGEI------------------------------KDEVSWNSMVVAYGQ 208
F+++A R+F E+ E KD +SW +++ Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ F+EM +D +T S+LTA L G Q HA++I++ + N +
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+Y KC +++ VF ++ +++ W M+ GY Q YS++A+ F + R
Sbjct: 308 GSALLDMYCKCR-NVKYAEAVFRKMRHKNVISWTAMLVGYGQNG-YSEEAVRIFCDMQRN 365
Query: 329 GYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
HPDD + VIS+C+NL S G Q H + + ++V+NAL+ +Y KCG+LE
Sbjct: 366 EIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLIC-FVTVSNALITLYGKCGSLEH 424
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +LF M + VS ++++GYAQ G E + LFE ML I P +TFV VLSAC+
Sbjct: 425 AHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSR 484
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
G V +G YF M P +HY+CMIDLL RAG+L +A+ I MPF+P +I
Sbjct: 485 AGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWA 544
Query: 508 -----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
AA +LEP N Y++L++IYAA GKW++VA +R+ MR+ G
Sbjct: 545 TLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMG 604
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K+PG SWI+ K ++H+F A+D S P +I+ LE + KM + GYVPD
Sbjct: 605 VKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVE 664
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
K K L HHSEKLA+AFGLL G I V+KNLR+CGDCHNA K+IS I REI VR
Sbjct: 665 KSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVR 724
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFH FKDG CSCGD+W
Sbjct: 725 DAVRFHLFKDGVCSCGDFW 743
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 288/759 (37%), Positives = 408/759 (53%), Gaps = 102/759 (13%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
T + +H +K+ + FS YL N+ + +YSK G A F++ FS+N +L+AY+
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
++ + S + FDQ+PQ D VS+ T+I Y + G A+ + DM ++ + FTL+
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 137 LITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR------------------ 176
++ + + C+ K++H + G SV+NSLL Y++
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 177 -------------NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
G +D A F +M E +D V+WNSM+ + Q L AL +F +M+
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 224 SLQL-GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG- 281
L D +TLAS+L+A +LE L G Q H+H++ +GF + + + LI +Y++C G
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 282 -------------------------------DMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
DM +F + D+V W MI GY Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKI-EIRSNR 368
Y +A+ F+ + G P+ + ++S S+L+ GKQIH +K EI S
Sbjct: 391 HGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-- 447
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+SV+NAL+ MY+K GN+ A R FD + E +TVS SMI AQHG EAL LFE ML
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P +IT+V V SAC H G V +G++YF MMKD+ P HY+CM+DL GRAG L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
+A+ IE MP P + AA L LEP N+ Y LAN+Y
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLY 627
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
+A GKWEE A IR+ M+D V+K+ GFSWIEVK ++HVF EDG+HP EI+ ++++
Sbjct: 628 SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIW 687
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++K+ GYVPD KE+ L HHSEKLA+AFGL+ST + +MKNLR+C
Sbjct: 688 DEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCN 747
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH AIKFIS + GREI VRDT RFH FKDG CSC DYW
Sbjct: 748 DCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 197/452 (43%), Gaps = 110/452 (24%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM----------- 190
SN + +HC I G + N+L+ YS+ G+ A+++F EM
Sbjct: 27 SNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTV 86
Query: 191 -------GEI------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
G++ +D VSW +M+V Y + +A+++ +MV +
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----------- 280
+TL ++L + + + G + H+ ++K G N + + L+++YAKC
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 281 -------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
G M M FE++ + D+V WN+MISG++Q+ Y +AL
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR-GYDLRALDI 265
Query: 322 FKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F K+ R PD + V+SAC+NL +GKQIH+ + + I V NAL++MY
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMY 324
Query: 380 SKCGNLEDARRLFDR---------------------------------MPEHNTVSLNSM 406
S+CG +E ARRL ++ + + + V+ +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMF 465
I GY QHG EA+ LF M+ P + T ++LS + ++ G Q + S +K
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK--- 441
Query: 466 GFEPEGEHYS-----CMIDLLGRAGKLTDAER 492
GE YS +I + +AG +T A R
Sbjct: 442 ----SGEIYSVSVSNALITMYAKAGNITSASR 469
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 176/376 (46%), Gaps = 15/376 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ- 59
T VL C L GK +H+ + S + N I +YS+CG + A Q
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 60 -TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
T+ + F LL Y + + A+ +F + D+V++ +I Y G A++L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + +TL+ +++ +S+ L KQ+H A+ G + SV+N+L+T Y++
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A R F + +D VSW SM++A QH EAL+LF+ M+ L D T
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 237 ILTAFTSLEDLVGGLQFHAHL--IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +A T + G Q+ + + SH ++DL+ + +G +++ + E++P
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC-MVDLFGR-AGLLQEAQEFIEKMP 578
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
+PD+V W +++S + + LG + P++ SA +NL + GK
Sbjct: 579 IEPDVVTWGSLLSAC---RVHKNIDLGKVAAERLLLLEPENSG---AYSALANLYSACGK 632
Query: 354 QIHALTIKIEIRSNRI 369
A I+ ++ R+
Sbjct: 633 WEEAAKIRKSMKDGRV 648
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/655 (39%), Positives = 385/655 (58%), Gaps = 36/655 (5%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H N +++ L+ YA+ RQ+F+++ DL+++NT+I A+ G+ E
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEE 429
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLT 172
A ++ M+ + + T L+ A N L +++H + GF SV N+L++
Sbjct: 430 ASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALIS 489
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y+R G + +A+ +F +M KD +SW +M+ + G EAL +FQ+M L +
Sbjct: 490 MYARCGSIKDARLLFNKMVR-KDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRV 548
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T SIL A +S L G + H +I++G ++H+ + L+++Y+ C G ++D +VF+
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC-GSVKDARQVFDR 607
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSL 351
+ Q D+V +N MI GY+ +AL F +L G PD +++ +++AC+N S
Sbjct: 608 MTQRDIVAYNAMIGGYA-AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEW 666
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
K+IH+L +K S+ S+ NALV+ Y+KCG+ DA +FD+M + N +S N++I G A
Sbjct: 667 AKEIHSLVLKDGYLSD-TSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCA 725
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG G + L+LFE M I P +TFVS+LSAC+H G + EG++YF M FG P
Sbjct: 726 QHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTI 785
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQ 514
EHY CM+DLLGRAG+L + E LI+ MPF + +A +AA L+
Sbjct: 786 EHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLK 845
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
L+P NA YV L+++YAA+G W+ A +R+LM RGV K+PG SWIEV ++H FVAED
Sbjct: 846 LDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDR 905
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLST 622
SHP ++I+ L++++ MK GYVPD KE + HHSE+LA+A+GL+ST
Sbjct: 906 SHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLIST 965
Query: 623 SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI + KNLR+C DCH A KFI+ I REI RD RFH FKDG CSCGDYW
Sbjct: 966 LPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 280/572 (48%), Gaps = 60/572 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++LK C+ +DLV G+ +H +++ Y N I +Y +CG
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS------------ 191
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV--SYNTLISAYADCGDTESALSLF 119
I ARQ+++++ + S+N ++ Y G E AL L
Sbjct: 192 -------------------IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLL 232
Query: 120 KDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
++M++ T L+++ S + L +++H A+ +V N +L Y++
Sbjct: 233 REMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKC 292
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + EA+ VF +M E K VSW ++ Y A ++FQ+M + + T ++
Sbjct: 293 GSIHEAREVFDKM-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINV 351
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L AF+ L G H+H++ +G + +G+ L+ +YAKC G +DC +VFE++ D
Sbjct: 352 LNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKC-GSYKDCRQVFEKLVNRD 410
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
L+ WNTMI G ++ + ++A + ++ R G P+ ++V +++AC N + G++IH
Sbjct: 411 LIAWNTMIGGLAEGGNW-EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ +K + ISV NAL++MY++CG+++DAR LF++M + +S +MI G A+ G+G
Sbjct: 470 SRVVKDGFMFD-ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLG 528
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL +F+ M + + P +T+ S+L+AC+ + G++ + + G + +
Sbjct: 529 AEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA-GLATDAHVANT 587
Query: 477 MIDLLGRAGKLTDAERLIEAM----------------PFNPGSIALKAANHFLQ--LEPS 518
++++ G + DA ++ + M N G ALK + + L+P
Sbjct: 588 LVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP- 646
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+ V Y+ + N A SG E I L+ G
Sbjct: 647 DKVTYINMLNACANSGSLEWAKEIHSLVLKDG 678
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 257/503 (51%), Gaps = 45/503 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++L +C L G+ +H +K + F ++N + +Y+KCG + A F++
Sbjct: 246 TTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM 305
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+ + +I YADCG +E A +F+
Sbjct: 306 ETKSVVSWTI-------------------------------IIGGYADCGHSEIAFEIFQ 334
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+++ + T ++ A S L K +H + G + +V +L+ Y++ G
Sbjct: 335 KMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG 394
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++VF ++ +D ++WN+M+ + EA +++ +M + + T +L
Sbjct: 395 SYKDCRQVFEKLVN-RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILL 453
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G + H+ ++K GF + + + LI +YA+C G ++D +F ++ + D+
Sbjct: 454 NACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARC-GSIKDARLLFNKMVRKDI 512
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS---LGKQI 355
+ W MI G + K +AL F+ + + G P+ ++ +++ACS SP+ G++I
Sbjct: 513 ISWTAMIGGLA-KSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACS--SPAALDWGRRI 569
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H I+ + ++ V N LV MYS CG+++DAR++FDRM + + V+ N+MI GYA H +
Sbjct: 570 HQQVIEAGLATD-AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNL 628
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHY 474
G EAL+LF+ + E + P +T++++L+ACA++G + ++ S+ +KD G+ +
Sbjct: 629 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD--GYLSDTSLG 686
Query: 475 SCMIDLLGRAGKLTDAERLIEAM 497
+ ++ + G +DA + + M
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKM 709
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 155/320 (48%), Gaps = 29/320 (9%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L ++DLV G + H H+I+ + + + LI++Y +C G + + +V+ ++
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQC-GSIEEARQVWNKLNHT 205
Query: 297 DLVL--WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--- 351
+ + WN M+ GY Q Y ++AL +++ + G + + ++S+C SPS
Sbjct: 206 ERTVHSWNAMVVGYVQYG-YIEEALKLLREMQQHGLALGRATTMRLLSSCK--SPSALEC 262
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G++IH +K + + ++V N ++ MY+KCG++ +AR +FD+M + VS +I GYA
Sbjct: 263 GREIHVEAMKARLLFD-VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYA 321
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
G A +F+ M + + P IT+++VL+A + + G+ S + + G E +
Sbjct: 322 DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNA-GHESDL 380
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
+ ++ + + G D ++ E +L + + + + A
Sbjct: 381 AVGTALVKMYAKCGSYKDCRQVFE------------------KLVNRDLIAWNTMIGGLA 422
Query: 532 ASGKWEEVATIRRLMRDRGV 551
G WEE + I M+ G+
Sbjct: 423 EGGNWEEASEIYHQMQREGM 442
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 141/311 (45%), Gaps = 41/311 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L C L G+ +H ++ + A+++N + +YS CG + A F++
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ ++N ++ YA A +LFD++ + PD V+Y +++A A+ G E A
Sbjct: 609 TQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWA- 667
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
K++H L + G+ S+ N+L++ Y++
Sbjct: 668 --------------------------------KEIHSLVLKDGYLSDTSLGNALVSTYAK 695
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +A VF +M + ++ +SWN+++ QH G + LQLF+ M + D+ T S
Sbjct: 696 CGSFSDALLVFDKMMK-RNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVS 754
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + L G ++ + + G ++DL + +G + + + + +P
Sbjct: 755 LLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGR-AGQLDEVEALIKTMPF 813
Query: 295 QPDLVLWNTMI 305
Q + +W ++
Sbjct: 814 QANTRIWGALL 824
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/709 (38%), Positives = 401/709 (56%), Gaps = 71/709 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L VG DL G+ +HAL +K+ +SN + +YSK G + AA F +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS---- 955
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
P+ DL+S+NT+IS+YA A+ F+D+
Sbjct: 956 ---------------------------PELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 125 KRFDTDGFTLSGLITASSNN-----LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D FTL+ ++ A S L Q+H AI CG + + V+ +L+ YS+ G
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+DEA+ + + + D SWN+++ Y + + +AL+ F M + + +D TLA+ +
Sbjct: 1049 MDEAEFLLHGKYDF-DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIK 1107
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L +L G Q A+ IK GF+ + + SG++D+Y KC GDM + +++F EI +PD V
Sbjct: 1108 ASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC-GDMPNALELFGEISRPDEV 1166
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W TMISGY + + D AL + + G PD+ +F +I A S L+ GKQIHA
Sbjct: 1167 AWTTMISGYIENGD-EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K++ + V +LV MY KCG+++DA R+F +M V N+M+ G AQHG E
Sbjct: 1226 VVKLDYSLDHF-VGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDE 1284
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M I P +TF+ VLSAC+H+G +E KYF M +G PE EHYSC++
Sbjct: 1285 ALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLV 1344
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
D LGRAG++ +AE +I +MPF + A + A+ L L+PS++
Sbjct: 1345 DALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSS 1404
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+NIYAAS +W++V R +M+ + V+K PGFSWI+VK ++H+FV +D SHP
Sbjct: 1405 AYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASL 1464
Query: 582 IHNYLEEMSRKMKQAG-YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I+ +E++ +++++ G YVPD KE+ L +HSEKLA+AFGL+ST I
Sbjct: 1465 IYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATI 1524
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+CGDCH+AIK IS + REI +RD RFH F++G CSCGDYW
Sbjct: 1525 RVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 225/497 (45%), Gaps = 68/497 (13%)
Query: 7 KTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
++ + DL GK HA + + YL+N+ I +YSKCG L +A F+++ ++
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
++N +LAAYA Q D SY ++ + LF +RE
Sbjct: 679 TWNSILAAYA---------QFADS-------SYENVLEGF----------RLFGLLREFG 712
Query: 127 FDTDGFT--LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
F T + S + + + +H A+ GF+ V+ +L+ Y + G + +A+
Sbjct: 713 FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQAR 772
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
+F +M E +D V WN M+ AY ++ EAL+ F + + F++L
Sbjct: 773 LLFDKMPE-RDAVLWNVMLKAYVENSFQDEALRFFS----------AFHRSGFXPDFSNL 821
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
++GG + S N + + YA MK+F ++ WN
Sbjct: 822 HCVIGG-------VNSDVSNNRKRHAEQVKAYA---------MKMFPFDQGSNIFAWNKK 865
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
++ + + A+ CFK L R D + V ++SA LG+QIHAL IK
Sbjct: 866 LTEFLHAGQIV-AAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSS 924
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + V+N+L+ MYSK G + A + F PE + +S N+MI+ YAQ+ + MEA+ F
Sbjct: 925 F-APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF------GFEPEGEHYSCM 477
+L + P T SVL AC+ TG E YF++ + G + + +
Sbjct: 984 RDLLRDGLKPDQFTLASVLRACS-TGDEGE---YFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 478 IDLLGRAGKLTDAERLI 494
IDL + GK+ +AE L+
Sbjct: 1040 IDLYSKGGKMDEAEFLL 1056
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
SA + LGK+ HA + +R NN L+ MYSKCG+L AR++FD+ + + V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNN-LITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 402 SLNSMIAGYAQHGIG-----MEALRLFEWMLETNIPPTNITFVSVLSACAHTG--KVAEG 454
+ NS++A YAQ +E RLF + E T +T +L C +G +V+E
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+++ GFE + ++++ + G + A L + MP
Sbjct: 739 VHGYAV---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP 779
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K L GK +HA +K ++ + +Y KCG + A+ F +
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
V +N +L A+ + A LF + QPD V++ ++SA + G A
Sbjct: 1262 DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAY 1321
Query: 117 SLFKDMREKRFDTDGFT-----LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
F M F T G T S L+ A I++ + F AS+ +LL
Sbjct: 1322 KYFDAM----FKTYGITPEIEHYSCLVDA-LGRAGRIQEAENVIASMPFKASASMYRALL 1376
Query: 172 TCYSRNGFLDEAKRV 186
G + AKRV
Sbjct: 1377 GACRTKGDAETAKRV 1391
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/709 (38%), Positives = 401/709 (56%), Gaps = 71/709 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L VG DL G+ +HAL +K+ +SN + +YSK G + AA F +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS---- 955
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
P+ DL+S+NT+IS+YA A+ F+D+
Sbjct: 956 ---------------------------PELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 125 KRFDTDGFTLSGLITASSNN-----LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D FTL+ ++ A S L Q+H AI CG + + V+ +L+ YS+ G
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+DEA+ + + + D SWN+++ Y + + +AL+ F M + + +D TLA+ +
Sbjct: 1049 MDEAEFLLHGKYDF-DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIK 1107
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L +L G Q A+ IK GF+ + + SG++D+Y KC GDM + +++F EI +PD V
Sbjct: 1108 ASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC-GDMPNALELFGEISRPDEV 1166
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W TMISGY + + D AL + + G PD+ +F +I A S L+ GKQIHA
Sbjct: 1167 AWTTMISGYIENGD-EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K++ + V +LV MY KCG+++DA R+F +M V N+M+ G AQHG E
Sbjct: 1226 VVKLDYSLDHF-VGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDE 1284
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M I P +TF+ VLSAC+H+G +E KYF M +G PE EHYSC++
Sbjct: 1285 ALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLV 1344
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
D LGRAG++ +AE +I +MPF + A + A+ L L+PS++
Sbjct: 1345 DALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSS 1404
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+NIYAAS +W++V R +M+ + V+K PGFSWI+VK ++H+FV +D SHP
Sbjct: 1405 AYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASL 1464
Query: 582 IHNYLEEMSRKMKQAG-YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I+ +E++ +++++ G YVPD KE+ L +HSEKLA+AFGL+ST I
Sbjct: 1465 IYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATI 1524
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+CGDCH+AIK IS + REI +RD RFH F++G CSCGDYW
Sbjct: 1525 RVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 225/497 (45%), Gaps = 68/497 (13%)
Query: 7 KTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
++ + DL GK HA + + YL+N+ I +YSKCG L +A F+++ ++
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
++N +LAAYA Q D SY ++ + LF +RE
Sbjct: 679 TWNSILAAYA---------QFADS-------SYENVLEGF----------RLFGLLREFG 712
Query: 127 FDTDGFT--LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
F T + S + + + +H A+ GF+ V+ +L+ Y + G + +A+
Sbjct: 713 FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQAR 772
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
+F +M E +D V WN M+ AY ++ EAL+ F + + F++L
Sbjct: 773 LLFDKMPE-RDAVLWNVMLKAYVENSFQDEALRFFS----------AFHRSGFFPDFSNL 821
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
++GG + S N + + YA MK+F ++ WN
Sbjct: 822 HCVIGG-------VNSDVSNNRKRHAEQVKAYA---------MKMFPFDQGSNIFAWNKK 865
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
++ + + A+ CFK L R D + V ++SA LG+QIHAL IK
Sbjct: 866 LTEFLHAGQIV-AAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSS 924
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + V+N+L+ MYSK G + A + F PE + +S N+MI+ YAQ+ + MEA+ F
Sbjct: 925 F-APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF------GFEPEGEHYSCM 477
+L + P T SVL AC+ TG E YF++ + G + + +
Sbjct: 984 RDLLRDGLKPDQFTLASVLRACS-TGDEGE---YFTLGSQVHVYAIKCGIINDSFVSTAL 1039
Query: 478 IDLLGRAGKLTDAERLI 494
IDL + GK+ +AE L+
Sbjct: 1040 IDLYSKGGKMDEAEFLL 1056
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
SA + LGK+ HA + +R NN L+ MYSKCG+L AR++FD+ + + V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNN-LITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 402 SLNSMIAGYAQHGIG-----MEALRLFEWMLETNIPPTNITFVSVLSACAHTG--KVAEG 454
+ NS++A YAQ +E RLF + E T +T +L C +G +V+E
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+++ GFE + ++++ + G + A L + MP
Sbjct: 739 VHGYAV---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP 779
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K L GK +HA +K ++ + +Y KCG + A+ F +
Sbjct: 1202 TFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
V +N +L A+ + A LF + QPD V++ ++SA + G A
Sbjct: 1262 DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAY 1321
Query: 117 SLFKDMREKRFDTDGFT-----LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
F M F T G T S L+ A I++ + F AS+ +LL
Sbjct: 1322 KYFDAM----FKTYGITPEIEHYSCLVDA-LGRAGRIQEAENVIASMPFKASASMYRALL 1376
Query: 172 TCYSRNGFLDEAKRV 186
G + AKRV
Sbjct: 1377 GACRTKGDAETAKRV 1391
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 278/772 (36%), Positives = 419/772 (54%), Gaps = 101/772 (13%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+L++ + RD G+ +HA +K+ L +L+N+ + LY K G S AH F++
Sbjct: 17 HLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPL 76
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
FS+N +L+A+A+ + SAR++FD+IPQPD VS+ T+I Y G +SA+ F M
Sbjct: 77 KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136
Query: 123 REKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
FT + ++ A++ L + K++H + G V NSLL Y++ G
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDS 196
Query: 181 DEAKRVFYEMGEIKDE-------------------------------VSWNSMVVAYGQH 209
AK VF M +KD VSWNS++ Y
Sbjct: 197 VMAKVVFDRM-RLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQ 255
Query: 210 REGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ AL+ F M+ S L D +TL S+L+A + E L G Q HAH++++ +
Sbjct: 256 GYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAV 315
Query: 269 GSGLIDLYAKCS--------------------------------GDMRDCMKVFEEIPQP 296
G+ LI +YAK GD+ +F+ +
Sbjct: 316 GNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHR 375
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
D+V W MI GY+Q SD AL F+ + R G P++ + V+S S+L S GKQ+
Sbjct: 376 DVVAWTAMIVGYAQNGLISD-ALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQL 434
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH-NTVSLNSMIAGYAQHG 414
HA+ I++E S+ +SV NAL+ MYS+ G+++DAR++F+ + + +T++ SMI AQHG
Sbjct: 435 HAVAIRLEEVSS-VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+G EA+ LFE ML N+ P +IT+V VLSAC H G V +G+ YF++MK++ EP HY
Sbjct: 494 LGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHY 553
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEP 517
+CMIDLLGRAG L +A I MP P +A AA L ++P
Sbjct: 554 ACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDP 613
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+N+ Y+ LAN +A GKWE+ A +R+ M+D+ V+K+ GFSW+++K ++H+F ED HP
Sbjct: 614 NNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHP 673
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
I+ + ++ +++K+ G++PD KE+ L HHSEKLA+AF L++T
Sbjct: 674 QRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKH 733
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +MKNLR+C DCH+AI++IS + REI VRD RFH FKDG CSC DYW
Sbjct: 734 TTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 170/332 (51%), Gaps = 10/332 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHH--AFN 58
T VL C R L GK +HA ++ V + + N I +Y+K G + AH
Sbjct: 280 TLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEIT 339
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
T NV +F LL Y + I AR +FD + D+V++ +I YA G AL L
Sbjct: 340 GTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVL 399
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + + +TL+ +++ S+ L KQLH +AI SV N+L+T YSR
Sbjct: 400 FRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSR 459
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G + +A+++F + +D ++W SM+++ QH G EA++LF++M+ + L D T
Sbjct: 460 SGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVG 519
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS--GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L+A T + LV + + +L+K+ S + +IDL + +G + + +P
Sbjct: 520 VLSACTHV-GLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGR-AGLLEEAYNFIRNMP 577
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+PD+V W +++S + +Y D A +KL
Sbjct: 578 IEPDVVAWGSLLSS-CRVHKYVDLAKVAAEKL 608
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 331 HPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
H D C + + SA + P +G+ IHA IK +R + + N L+ +Y K G+ DA R
Sbjct: 11 HSDACVHL-LQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHR 69
Query: 391 LFDRM-------------------------------PEHNTVSLNSMIAGYAQHGIGMEA 419
LFD M P+ ++VS +MI GY G+ A
Sbjct: 70 LFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSA 129
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ F M+ + I PT TF +VL++CA + G+K S +
Sbjct: 130 VHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFV 171
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 283/754 (37%), Positives = 412/754 (54%), Gaps = 83/754 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C +DL GK +H + + + +++N +++Y+KC + F++
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QP---------------------- 94
NV S+N L + Y + A LF ++ +P
Sbjct: 219 PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 95 -------------DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
D S N L+ YA GD A+S+F+ +++ + ++G +
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338
Query: 142 SNNLCL------IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ L +QLH + + V+ L+ YS+ L++A+ F + E KD
Sbjct: 339 HHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE-KD 397
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
++WN+++ Y Q+ E +EAL LF EM +G + TL++IL + L+ + Q H
Sbjct: 398 LIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 457
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
+KSGFH + ++ + LID Y KCS + D ++FEE DLV + +MI+ Y+Q +
Sbjct: 458 LSVKSGFHSDIYVVNSLIDSYGKCS-HVEDAERIFEECTIGDLVSFTSMITAYAQYGQ-G 515
Query: 316 DQALGCFKKLNRVGYHPDDCSFVC--VISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
++AL F ++ + PD FVC +++AC+NLS GKQ+H +K + I
Sbjct: 516 EEALKLFLEMQDMELKPD--RFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLD-IFAG 572
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N+LV MY+KCG+++DA R F + E VS ++MI G AQHG G +AL+LF ML+ +
Sbjct: 573 NSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVS 632
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P +IT VSVL AC H G V E + YF M+++FGF+P EHY+CMIDLLGRAGK+ +A
Sbjct: 633 PNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 692
Query: 493 LIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
L+ MPF + + +AA LEP + +V+LANIYA++GK
Sbjct: 693 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGK 752
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
WE VA +RRLMRD V+K+PG SWIEVK +++ F+ D SH +EI+ L+E+S M +
Sbjct: 753 WENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDK 812
Query: 596 AGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
AGYVP +KE L HHSEKLAVAFGL++T G PI V KNLR+C DCH A
Sbjct: 813 AGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTA 872
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K+I I REI VRD RFH FKDG CSCGDYW
Sbjct: 873 FKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 277/595 (46%), Gaps = 109/595 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ ++L C + L G +HA K+ + + NH I LYSKC
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC------------- 104
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F + AR+L D+ +PDLVS++ LIS YA G AL F
Sbjct: 105 ---RXFGY---------------ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-N 177
+M + FT S ++ A S +L + KQ+H + + GF+ V N+L+ Y++ +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
FLD +KR+F E+ E ++ VSWN++ Y Q EA+ LF EMV + + ++L+S+
Sbjct: 207 EFLD-SKRLFDEIPE-RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ A T L D G H +LIK G+ + + L+D+YAK GD+ D + VFE+I QPD
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV-GDLADAISVFEKIKQPD 323
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
+V WN +I+G E+ +QAL ++ R Q+H+
Sbjct: 324 IVSWNAVIAG-CVLHEHHEQALELLGQMKR--------------------------QLHS 356
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K+++ S+ + V+ LV MYSKC LEDAR F+ +PE + ++ N++I+GY+Q+ M
Sbjct: 357 SLMKMDMESD-LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFEPEGE 472
EAL LF M + I T ++L + A H + G S GF +
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS------GFHSDIY 469
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
+ +ID G+ + DAER+ E + + V + + YA
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFE------------------ECTIGDLVSFTSMITAYAQ 511
Query: 533 SGKWEEVATIRRLMRDRGVQKKP-------------GFSWIEVKKQMHVFVAEDG 574
G+ EE + M+D ++ KP S E KQ+HV + + G
Sbjct: 512 YGQGEEALKLFLEMQD--MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 276/708 (38%), Positives = 390/708 (55%), Gaps = 67/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G R++ G+ +HA+ ++ + Y K
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVR--------------MGYEK--------------- 142
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VF+ N L+ Y + R+ A +F+++P D+VS+N LIS G A+ L
Sbjct: 143 --DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 200
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + F LS ++ A + L +Q+H I D + L+ Y++N F
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 260
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+A +VF M +D + WN+++ EA +F + LG++ TLA++L
Sbjct: 261 LDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ SLE Q HA K GF ++H+ +GLID Y KCS + D ++VFEE D++
Sbjct: 320 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSC-LSDAIRVFEECSSGDII 378
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+MI+ SQ + + + A+ F ++ R G PD +++AC++LS GKQ+HA
Sbjct: 379 AVTSMITALSQCD-HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 437
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK + S+ + NALV Y+KCG++EDA F +PE VS ++MI G AQHG G
Sbjct: 438 LIKRQFMSDAFA-GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 496
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M++ I P +IT SVL AC H G V E ++YF+ MK+MFG + EHYSCMI
Sbjct: 497 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 556
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAGKL DA L+ +MPF + + AA LEP +
Sbjct: 557 DLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 616
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LAN YA+SG W EVA +R+LM+D ++K+P SW+EVK ++H F+ D SHPM KE
Sbjct: 617 THVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKE 676
Query: 582 IHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I++ L+E+ M +AGY+P +KE L HHSE+LAVAF LLST G PI
Sbjct: 677 IYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIR 736
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH A KFIS I REI +RD RFH F+DG CSCGDYW
Sbjct: 737 VKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 221/449 (49%), Gaps = 27/449 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQI-PQPDLVSYNTLISAYA---DCGDTESALSL 118
++VF N L+A Y + AR++FD+ + + VS+N L+SAY CGD A+ +
Sbjct: 40 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD---AIQV 96
Query: 119 FKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F +M F S ++ A S N+ +Q+H + + G++ N+L+ Y +
Sbjct: 97 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 156
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D A +F +M + D VSWN+++ + A++L +M S L +++ L+S
Sbjct: 157 MGRVDIASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS 215
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
IL A G Q H +IK+ + +IG GL+D+YAK + + D MKVF+ +
Sbjct: 216 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK-NHFLDDAMKVFDWMSHR 274
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
DL+LWN +ISG S + D+A F L + G + + V+ + ++L + S +Q+
Sbjct: 275 DLILWNALISGCSHGGRH-DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 333
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HAL KI + V N L+ Y KC L DA R+F+ + +++ SMI +Q
Sbjct: 334 HALAEKIGFIFD-AHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH 392
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS------MMKDMFGFEP 469
G A++LF ML + P S+L+ACA +G++ + M D F
Sbjct: 393 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA--- 449
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + G + DAE ++P
Sbjct: 450 ----GNALVYTYAKCGSIEDAELAFSSLP 474
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 175/347 (50%), Gaps = 5/347 (1%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
Q+H +A+ GF V N+L+ Y GF+D+A+RVF E G ++ VSWN ++ AY ++
Sbjct: 28 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 87
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+ +A+Q+F EMV + + + ++ A T ++ G Q HA +++ G+ ++
Sbjct: 88 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 147
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ L+D+Y K G + +FE++P D+V WN +ISG + +A+ ++ G
Sbjct: 148 NALVDMYVKM-GRVDIASVIFEKMPDSDVVSWNALISG-CVLNGHDHRAIELLLQMKSSG 205
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ ++ AC+ LG+QIH IK S+ + LV MY+K L+DA
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLDDA 264
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
++FD M + + N++I+G + G EA +F + + + T +VL + A
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ A + + + GF + + +ID + L+DA R+ E
Sbjct: 325 -EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 370
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPDLVLWNTMISGY 308
G Q HA + +GF + + + L+ +Y G M D +VF+E + + V WN ++S Y
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGF-GFMDDARRVFDEAGSERNAVSWNGLMSAY 84
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSN 367
+ ++ D A+ F ++ G P + F CV++AC+ + + G+Q+HA+ +++ +
Sbjct: 85 VKNDQCGD-AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ NALV MY K G ++ A +F++MP+ + VS N++I+G +G A+ L M
Sbjct: 144 VFTA-NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 202
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ + P S+L ACA G G++ M
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK+ + +HAL K F A++ N I Y KC CLS
Sbjct: 313 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLS--------- 363
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++F++ D+++ ++I+A + C E A+ LF
Sbjct: 364 ----------------------DAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFM 401
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K + D F LS L+ AS + KQ+H I F A N+L+ Y++ G
Sbjct: 402 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG 461
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ F + E + VSW++M+ QH G AL+LF MV + + T+ S+L
Sbjct: 462 SIEDAELAFSSLPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520
Query: 239 TAFTSLEDLVGGLQFHAHLIKS--GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + LV + + + +K G + S +IDL + +G + D M++ +P Q
Sbjct: 521 CA-CNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR-AGKLDDAMELVNSMPFQ 578
Query: 296 PDLVLWNTMI 305
+ +W ++
Sbjct: 579 ANASVWGALL 588
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 276/708 (38%), Positives = 390/708 (55%), Gaps = 67/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G R++ G+ +HA+ ++ + Y K
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVR--------------MGYEK--------------- 235
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VF+ N L+ Y + R+ A +F+++P D+VS+N LIS G A+ L
Sbjct: 236 --DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + F LS ++ A + L +Q+H I D + L+ Y++N F
Sbjct: 294 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+A +VF M +D + WN+++ EA +F + LG++ TLA++L
Sbjct: 354 LDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 412
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ SLE Q HA K GF ++H+ +GLID Y KCS + D ++VFEE D++
Sbjct: 413 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSC-LSDAIRVFEECSSGDII 471
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+MI+ SQ + + + A+ F ++ R G PD +++AC++LS GKQ+HA
Sbjct: 472 AVTSMITALSQCD-HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK + S+ + NALV Y+KCG++EDA F +PE VS ++MI G AQHG G
Sbjct: 531 LIKRQFMSDAFA-GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 589
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M++ I P +IT SVL AC H G V E ++YF+ MK+MFG + EHYSCMI
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 649
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAGKL DA L+ +MPF + + AA LEP +
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 709
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LAN YA+SG W EVA +R+LM+D ++K+P SW+EVK ++H F+ D SHPM KE
Sbjct: 710 THVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKE 769
Query: 582 IHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I++ L+E+ M +AGY+P +KE L HHSE+LAVAF LLST G PI
Sbjct: 770 IYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIR 829
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH A KFIS I REI +RD RFH F+DG CSCGDYW
Sbjct: 830 VKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 236/496 (47%), Gaps = 39/496 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T Q L + L+ G LHA LK+ F A L NH I YSKC
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKS--GFLASLRNHLISFYSKC------------- 50
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R AR++FD+IP P VS+++L++AY++ G SA+ F
Sbjct: 51 ------------------RRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFH 92
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
MR + + F L ++ + L Q+H +A+ GF V N+L+ Y GF+
Sbjct: 93 GMRAEGVCCNEFALP-VVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFM 151
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D+A+RVF E G ++ VSWN ++ AY ++ + +A+Q+F EMV + + + ++ A
Sbjct: 152 DDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNA 211
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
T ++ G Q HA +++ G+ ++ + L+D+Y K G + +FE++P D+V
Sbjct: 212 CTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKM-GRVDIASVIFEKMPDSDVVS 270
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WN +ISG + +A+ ++ G P+ ++ AC+ LG+QIH
Sbjct: 271 WNALISG-CVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK S+ + LV MY+K L+DA ++FD M + + N++I+G + G EA
Sbjct: 330 IKANADSDDY-IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 388
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+F + + + T +VL + A + A + + + GF + + +ID
Sbjct: 389 FSIFYGLRKEGLGVNRTTLAAVLKSTASL-EAASATRQVHALAEKIGFIFDAHVVNGLID 447
Query: 480 LLGRAGKLTDAERLIE 495
+ L+DA R+ E
Sbjct: 448 SYWKCSCLSDAIRVFE 463
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK+ + +HAL K F A++ N I Y KC CLS
Sbjct: 406 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLS--------- 456
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++F++ D+++ ++I+A + C E A+ LF
Sbjct: 457 ----------------------DAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFM 494
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K + D F LS L+ AS + KQ+H I F A N+L+ Y++ G
Sbjct: 495 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG 554
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ F + E + VSW++M+ QH G AL+LF MV + + T+ S+L
Sbjct: 555 SIEDAELAFSSLPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 239 TAFTSLEDLVGGLQFHAHLIKS--GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + LV + + + +K G + S +IDL + +G + D M++ +P Q
Sbjct: 614 CA-CNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGR-AGKLDDAMELVNSMPFQ 671
Query: 296 PDLVLWNTMI 305
+ +W ++
Sbjct: 672 ANASVWGALL 681
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/710 (37%), Positives = 400/710 (56%), Gaps = 68/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL G DL GK +H + +K+ + ++N + +YSK GC
Sbjct: 906 TLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC----------- 954
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AY AR++F+ + DL+S+N++IS+ A E +++LF
Sbjct: 955 -------------AYF-------AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFI 994
Query: 121 DMREKRFDTDGFTLSGLITASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
D+ + D FTL+ ++ A S + L + +Q+H A+ G + V +L+ YS++
Sbjct: 995 DLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKS 1054
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++EA+ +F ++ D WN+M+ Y +G +AL+LF + D TLA+
Sbjct: 1055 GKMEEAEFLFQNKDDL-DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATA 1113
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
A L L G Q HAH IK+GF + H+ SG++D+Y KC GDM + VF I PD
Sbjct: 1114 AKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC-GDMVNAGIVFNYISAPD 1172
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
V W +MISG DQAL + ++ + PD+ +F +I A S ++ G+Q+H
Sbjct: 1173 DVAWTSMISGCVDNGN-EDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 1231
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A IK++ S+ V +LV MY+KCGN+EDA RLF +M N N+M+ G AQHG
Sbjct: 1232 ANVIKLDCVSDPF-VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 1290
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EA+ LF+ M I P ++F+ +LSAC+H G +E +Y M + +G EPE EHYSC
Sbjct: 1291 EEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSC 1350
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
++D LGRAG + +A+++IE MPF + + A LEP +
Sbjct: 1351 LVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFD 1410
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ YV+L+NIYAA+ +W++V R++M+ + V+K PGFSWI+VK +H+FV +D SHP
Sbjct: 1411 SAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQA 1470
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
I++ +EEM + +++ GYVPD KE+ L +HSEKLA+A+GL+ST
Sbjct: 1471 DIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTT 1530
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V+KNLR+CGDCHNAIK+IS + REI +RD RFH F+DG CSCGDYW
Sbjct: 1531 IRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 279/603 (46%), Gaps = 76/603 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C+ L + +H +K + + ++S + +YSKCG + A F+
Sbjct: 729 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 788
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF-------------------------------- 88
+ +V +N++L Y + A QLF
Sbjct: 789 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Query: 89 --DQI-----------PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
DQ+ PD+ +N +S GD A+ F +M D D TL
Sbjct: 849 LADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLL 908
Query: 136 GLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
++ A +++L L KQ+H +A+ G D SV NSL+ YS+ G A+ VF +M +
Sbjct: 909 VVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 968
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED-LVGGLQ 252
D +SWNSM+ + Q E++ LF +++ L D +TLAS+L A +SL D L Q
Sbjct: 969 -DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQ 1027
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
H H +K+G +S + + LID+Y+K SG M + +F+ DL WN M+ GY
Sbjct: 1028 IHVHALKTGNIADSFVATTLIDVYSK-SGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGN 1086
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISV 371
+ +AL F +++ G D + AC L GKQIHA IK S+ + V
Sbjct: 1087 D-GKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD-LHV 1144
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N+ ++ MY KCG++ +A +F+ + + V+ SMI+G +G +ALR++ M ++ +
Sbjct: 1145 NSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 1204
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY--SCMIDLLGRAGKLTD 489
P TF +++ A + + +G++ + ++ + + + + ++D+ + G + D
Sbjct: 1205 MPDEYTFATLIKASSCVTALEQGRQ---LHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 1261
Query: 490 AERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
A RL + M N +IAL A ML + A G EE + + M+
Sbjct: 1262 AYRLFKKM--NVRNIALWNA---------------MLVGL-AQHGNAEEAVNLFKSMKSH 1303
Query: 550 GVQ 552
G++
Sbjct: 1304 GIE 1306
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 62/496 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+T + +L+ GK HA + + +LSN+ + +YSKCG LS+A F+ T +
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ ++N +L AYA S ++ G+ + L LF+ +R
Sbjct: 687 LVTWNAILGAYA--------------------------ASVDSNDGNAQEGLHLFRLLRA 720
Query: 125 KRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
T TL+ ++ N+ CL + +H AI G + V+ +L+ YS+ G + +
Sbjct: 721 SLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRD 780
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M E +D V WN M+ Y Q EA QLF E L D +++ IL +
Sbjct: 781 ARLLFDWMRE-RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+ N G L D + K+ PD+ WN
Sbjct: 840 EV--------------------NWDEGKWLADQVQAYAA------KLSLSDDNPDVFCWN 873
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
+S + + A+ CF +N + D + + V++A + LGKQ+H + +K
Sbjct: 874 KKLSECLWAGD-NWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVK 932
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ S+ +SV N+LV MYSK G AR +F+ M + +S NSMI+ AQ + E++
Sbjct: 933 SGLDSD-VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVN 991
Query: 422 LFEWMLETNIPPTNITFVSVLSACAH--TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LF +L + P + T SVL AC+ G Q + +K G + + +ID
Sbjct: 992 LFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKT--GNIADSFVATTLID 1049
Query: 480 LLGRAGKLTDAERLIE 495
+ ++GK+ +AE L +
Sbjct: 1050 VYSKSGKMEEAEFLFQ 1065
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 277/778 (35%), Positives = 412/778 (52%), Gaps = 106/778 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C G+ LH L LK Y+ N + LYS+ G A FN
Sbjct: 274 FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISA------------ 105
+ S+N L++ ++Q A +LF ++ +PD V+ +L+SA
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 106 -----------------------YADCGDTESA--------------------------- 115
Y C D ++A
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 116 ----LSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNS 169
+F M+ + + + FT ++ S+ + L +Q+H + GF V++
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSV 513
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y++ G LD A ++F + E KD VSW +M+ Y QH + EAL LF+EM +
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLKE-KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D AS ++A ++ L G Q HA SG+ + +G+ L+ LYA+C G +RD
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARC-GKVRDAYFA 631
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF-VCVISACSNLS 348
F++I D + WN++ISG++Q + ++AL F ++++ G + +F V +A + +
Sbjct: 632 FDKIFSKDNISWNSLISGFAQ-SGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVAN 690
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
LGKQIHA+ IK + V+N L+ +Y+KCGN++DA R F MPE N +S N+M+
Sbjct: 691 VKLGKQIHAMIIKTG-HDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLT 749
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GY+QHG G +AL LFE M + + P ++TFV VLSAC+H G V EG KYF M+++ G
Sbjct: 750 GYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLV 809
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANH 511
P+ EHY+C++DLLGR+G L+ A R +E MP P ++ + AA+H
Sbjct: 810 PKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASH 869
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L+LEP ++ YV+L+N+YA +GKW R++M+DRGV+K+PG SWIEV +H F A
Sbjct: 870 LLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFA 929
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVP-------DKEKR-----LVHHSEKLAVAFGL 619
D HP + +I+ YL +++ + GY+P D E+R + HSEKLA+AFGL
Sbjct: 930 GDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGL 989
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LS S PI V KNLR+CGDCHN IK++S I+ R I VRD+YRFH FK G CSC DYW
Sbjct: 990 LSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 170/610 (27%), Positives = 304/610 (49%), Gaps = 49/610 (8%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F N L+ Y + + SA+++FD + + D VS+ ++S + G E A+ LF M
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH 263
Query: 124 EKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ S +++A + + +QLH L + GF V N+L+T YSR G
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A++VF M + +DEVS+NS++ Q +AL+LF++M L D T+AS+L+A
Sbjct: 324 PAEQVFNAMLQ-RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+S+ L+ G QFH++ IK+G + + L+DLY KCS D++ + F ++VLW
Sbjct: 383 SSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCS-DIKTAHEFFLSTETENVVLW 441
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
N M+ Y + +++ F ++ G P+ ++ ++ CS+L + LG+QIH +
Sbjct: 442 NVMLVAYGLLDNL-NESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVL 500
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K + N + V++ L+ MY+K G L+ A ++F R+ E + VS +MIAGYAQH EAL
Sbjct: 501 KTGFQFN-VYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEAL 559
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+ M + I NI F S +SACA + +GQ+ + + G+ + + ++ L
Sbjct: 560 NLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQAC-VSGYSDDLSVGNALVSL 618
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
R GK+ DA + + F+ +I+ + L + +A SG EE
Sbjct: 619 YARCGKVRDAYFAFDKI-FSKDNISWNS-----------------LISGFAQSGHCEEAL 660
Query: 541 TIRRLMRDRGVQKKPGFSW------------IEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
++ M G Q+ F++ +++ KQ+H + + G H E+ N L
Sbjct: 661 SLFSQMSKAG-QEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTG-HDSETEVSNVLIT 718
Query: 589 MSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE------PILVMKNLRICGDCHN 642
+ K G + D E++ EK +++ + T Y + + + ++++ G N
Sbjct: 719 LYAK---CGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPN 775
Query: 643 AIKFISAIAG 652
+ F+ ++
Sbjct: 776 HVTFVGVLSA 785
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 244/518 (47%), Gaps = 36/518 (6%)
Query: 48 GCLSAAHHAFNQTQHANV----FSFNVLLAAYARQLRIA-----SARQLFDQIPQPDLVS 98
GCLS+ + H + F V+L L IA A +FD++P L
Sbjct: 77 GCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSC 136
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN---LCLIKQLHCLA 155
+N ++ + L LF+ M +++ D T +G++ ++++H
Sbjct: 137 WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHART 196
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
I G+++ V N L+ Y +NGFL+ AK+VF + + +D VSW +M+ Q EA
Sbjct: 197 ITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGL-QKRDSVSWVAMLSGLSQSGCEEEA 255
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+ LF +M + + Y +S+L+A T +E G Q H ++K GF +++ + L+ L
Sbjct: 256 VLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTL 315
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y++ G+ +VF + Q D V +N++ISG SQ + YSD+AL FKK+ PD
Sbjct: 316 YSRL-GNFIPAEQVFNAMLQRDEVSYNSLISGLSQ-QGYSDKALELFKKMCLDCLKPDCV 373
Query: 336 SFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ ++SACS++ L GKQ H+ IK + S+ I + AL+ +Y KC +++ A F
Sbjct: 374 TVASLLSACSSVGALLVGKQFHSYAIKAGMSSD-IILEGALLDLYVKCSDIKTAHEFFLS 432
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
N V N M+ Y E+ ++F M I P T+ S+L C+ V G
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQ 514
++ + + GF+ S +ID+ + GKL A ++ F +
Sbjct: 493 EQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKI------------------FRR 533
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
L+ + V + + YA K+ E + + M+D+G+
Sbjct: 534 LKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIH 571
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/737 (36%), Positives = 399/737 (54%), Gaps = 68/737 (9%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L + R + +LH + L+ L P +L NH + Y K G + A F+ T H N
Sbjct: 12 LLSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPN 71
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+F++N LL+ A + LF + Q D VSYN +I+ ++ G A+ L+ +
Sbjct: 72 LFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLR 131
Query: 125 --KRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
T+S ++ A+S + L +Q HC + GF A V + L+ Y++ G +
Sbjct: 132 AGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLI 191
Query: 181 DEAKRVFYEMG---------------------------EI---KDEVSWNSMVVAYGQHR 210
+AKRVF EM E+ +D ++W +MV + Q+
Sbjct: 192 GDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNG 251
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+AL F+ M + +D YT SILTA +L L G Q HA++I++ + N +GS
Sbjct: 252 LESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGS 311
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
L+D+Y+KC ++ F + +++ W +I GY Q S++A+ F ++ R G
Sbjct: 312 ALVDMYSKCR-SIKPAETAFRRMSCKNIISWTALIVGYGQNG-CSEEAVRVFSEMQRDGI 369
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PDD + VIS+C+NL S G Q H L + + + I+V+NALV +Y KCG++EDA
Sbjct: 370 DPDDFTLGSVISSCANLASLEEGAQFHCLAL-VSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
RLFD M H+ VS +++ GYAQ G E + LFE ML ++ P +TF+ VLSAC+ G
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-- 507
V +G YF M+ G P +HY+CMIDL R+G+L +AE I+ MP +P +I
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTL 548
Query: 508 ---------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA + L+++P N YV+L +++A G W +VA +RR MRDR V+
Sbjct: 549 LSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVK 608
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------ 600
K+PG SWI+ K ++H+F A+D SHP K I+ LE ++ KM + GY P
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADT 668
Query: 601 DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
DK + HHSEKLA+AFGL+ + PI ++KNLR+C DCHNA K IS I GR+I VRD
Sbjct: 669 DKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDA 728
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH F +G CSCGD+W
Sbjct: 729 VRFHKFSNGVCSCGDFW 745
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +HA ++ + ++ + + +YSKC + A AF +
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRM 333
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ +S+ LI Y G +E A+ +F
Sbjct: 334 SCKNI-------------------------------ISWTALIVGYGQNGCSEEAVRVFS 362
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D D FTL +I++ +N L + Q HCLA+ G HY +V+N+L+T Y + G
Sbjct: 363 EMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VSW ++V Y Q E + LF++M++ + D T +L
Sbjct: 423 SIEDAHRLFDEM-LFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVL 481
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + G FH+ G + +IDLY++ SG +++ + +++P P
Sbjct: 482 SACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSR-SGRLKEAEEFIKQMPMHP 540
Query: 297 DLVLWNTMISG 307
D + W T++S
Sbjct: 541 DAIGWGTLLSA 551
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 272/646 (42%), Positives = 382/646 (59%), Gaps = 40/646 (6%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
FS N L+ YA+ +A A +F++I QPD+VS+N +I+ E AL L M+
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRS 353
Query: 126 RFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ FTLS + A + L +QLH + + V+ L+ YS+ L++A
Sbjct: 354 GICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 413
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+ F + E KD ++WN+++ Y Q+ E +EAL LF EM +G + TL++IL +
Sbjct: 414 RMAFNLLPE-KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAG 472
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L+ + Q H +KSGFH + ++ + LID Y KCS + D ++FEE DLV + +
Sbjct: 473 LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS-HVEDAERIFEECTIGDLVSFTS 531
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC--VISACSNLSP-SLGKQIHALTI 360
MI+ Y+Q + ++AL F ++ + PD FVC +++AC+NLS GKQ+H +
Sbjct: 532 MITAYAQYGQ-GEEALKLFLEMQDMELKPD--RFVCSSLLNACANLSAFEQGKQLHVHIL 588
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K + I N+LV MY+KCG+++DA R F + E VS ++MI G AQHG G +AL
Sbjct: 589 KYGFVLD-IFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQAL 647
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+LF ML+ + P +IT VSVL AC H G V E + YF M+++FGF+P EHY+CMIDL
Sbjct: 648 QLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDL 707
Query: 481 LGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPY 523
LGRAGK+ +A L+ MPF + + +AA LEP + +
Sbjct: 708 LGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTH 767
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+LANIYA++GKWE VA +RRLMRD V+K+PG SWIEVK +++ F+ D SH +EI+
Sbjct: 768 VLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIY 827
Query: 584 NYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
L+E+S M +AGYVP +KE L HHSEKLAVAFGL++T G PI V
Sbjct: 828 AKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVK 887
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH A K+I I REI VRD RFH FKDG CSCGDYW
Sbjct: 888 KNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 179/596 (30%), Positives = 287/596 (48%), Gaps = 84/596 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ ++L C + L G +HA K+ + + NH I LYSKC
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC------------- 104
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR+L D+ +PDLVS++ LIS YA G AL F
Sbjct: 105 ------------------RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-N 177
+M + FT S ++ A S +L + KQ+H + + GF+ V N+L+ Y++ +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
FLD +KR+F E+ E ++ VSWN++ Y Q EA+ LF EMV + + ++L+S+
Sbjct: 207 EFLD-SKRLFDEIPE-RNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ A T L D G H +LIK G+ + + L+D+YAK GD+ D + VFE+I QPD
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV-GDLADAISVFEKIKQPD 323
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
+V WN +I+G E+ +QAL ++ R G P+ + + AC+ + LG+Q+H
Sbjct: 324 IVSWNAVIAG-CVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ +K+++ S+ + V+ LV MYSKC LEDAR F+ +PE + ++ N++I+GY+Q+
Sbjct: 383 SSLMKMDMESD-LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 441
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFEPEG 471
MEAL LF M + I T ++L + A H + G S GF +
Sbjct: 442 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS------GFHSDI 495
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
+ +ID G+ + DAER+ E + + V + + YA
Sbjct: 496 YVVNSLIDSYGKCSHVEDAERIFE------------------ECTIGDLVSFTSMITAYA 537
Query: 532 ASGKWEEVATIRRLMRDRGVQKKP-------------GFSWIEVKKQMHVFVAEDG 574
G+ EE + M+D ++ KP S E KQ+HV + + G
Sbjct: 538 QYGQGEEALKLFLEMQD--MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 591
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 245/496 (49%), Gaps = 41/496 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C +DL GK +H + V S +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGV-----VVVSGF------------------------- 188
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+VF N L+ YA+ +++LFD+IP+ ++VS+N L S Y A+ LF
Sbjct: 189 -EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFY 247
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + F+LS ++ A + + K +H I G+D N+L+ Y++ G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A VF ++ + D VSWN+++ H +AL+L +M + +++TL+S L
Sbjct: 308 DLADAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSAL 366
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + G Q H+ L+K + + GL+D+Y+KC + D F +P+ DL
Sbjct: 367 KACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCD-LLEDARMAFNLLPEKDL 425
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
+ WN +ISGYSQ E +AL F ++++ G + + ++ + + L + +Q+H
Sbjct: 426 IAWNAIISGYSQYWE-DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 484
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L++K S+ I V N+L+ Y KC ++EDA R+F+ + VS SMI YAQ+G G
Sbjct: 485 LSVKSGFHSD-IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGE 543
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSC 476
EAL+LF M + + P S+L+ACA+ +G Q + ++K +GF + +
Sbjct: 544 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK--YGFVLDIFAGNS 601
Query: 477 MIDLLGRAGKLTDAER 492
++++ + G + DA R
Sbjct: 602 LVNMYAKCGSIDDAGR 617
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 30/260 (11%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H++++ N L+ +Y + + A ++F++ DLVS+ ++I+AYA G E AL LF +
Sbjct: 492 HSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLE 551
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M++ D F S L+ A +N KQLH + GF NSL+ Y++ G
Sbjct: 552 MQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGS 611
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D+A R F E+ E + VSW++M+ QH G +ALQLF +M+ + + TL S+L
Sbjct: 612 IDDAGRAFSELTE-RGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLG 670
Query: 240 A-------------FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
A F S+E+L G H + +IDL + +G + +
Sbjct: 671 ACNHAGLVTEAKLYFESMEELFGFKPMQEHY------------ACMIDLLGR-AGKINEA 717
Query: 287 MKVFEEIP-QPDLVLWNTMI 305
+++ ++P + + +W ++
Sbjct: 718 VELVNKMPFEANASVWGALL 737
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC---SNLSPS 350
P P L+ + +SQ Q +++ + P S+ ++S C +L P
Sbjct: 23 PAPKLI---QTVPQFSQ----DPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPG 75
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
L QIHA K + S+ S+ N L+ +YSKC N AR+L D E + VS +++I+GY
Sbjct: 76 L--QIHAHITKSGL-SDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGY 132
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQ+G+G AL F M + TF SVL AC+ + G++ ++ + GFE +
Sbjct: 133 AQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV-VSGFEGD 191
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + + + D++RL + +P
Sbjct: 192 VFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C GK LH LK + N + +Y+KCG + A AF++
Sbjct: 567 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG 626
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
+ S++ ++ A+ A QLF+Q+ + P+ ++ +++ A G A F+
Sbjct: 627 IVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFE 686
Query: 121 DMRE 124
M E
Sbjct: 687 SMEE 690
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/709 (37%), Positives = 399/709 (56%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C GK +H L++ + + +L+N + +Y +CG
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGS----------- 536
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A+ +F+ D++S+N++I+ +A G E+A LF
Sbjct: 537 --------------------IMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFL 576
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+++ + D T + ++ N L L +Q+H L I G ++ N+L+ Y R G
Sbjct: 577 EMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCG 636
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A VF+ + ++ +SW +M+ + E +A +LF +M + T +SIL
Sbjct: 637 SLQDAYEVFHSLRH-RNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSIL 695
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A S L G + AH++ SG+ ++ +G+ LI Y+K SG M D KVF+++P D+
Sbjct: 696 KACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK-SGSMTDARKVFDKMPNRDI 754
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN MI+GY+Q AL ++ G + SFV +++ACS+ S GK++HA
Sbjct: 755 MSWNKMIAGYAQNG-LGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHA 813
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K +++ + + V AL++MY+KCG+LE+A+ +FD E N V+ N+MI YAQHG+
Sbjct: 814 EIVKRKMQGD-VRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLAS 872
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL F M + I P TF S+LSAC H+G V EG + FS ++ G P EHY C+
Sbjct: 873 KALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCL 932
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSNA 520
+ LLGRAG+ +AE LI MPF P G++AL AAN+ L+L N
Sbjct: 933 VGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNP 992
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YAA+G+W++VA IRR+M RG++K+PG SWIEV +H F+A D SHP
Sbjct: 993 AVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 1052
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ L+ +S +M++AGY PD +E L HSE+LA+A+GLL T G PI
Sbjct: 1053 EIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPI 1112
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLRICGDCH A KFIS + GREI RD+ RFH FK+G+CSC D+W
Sbjct: 1113 RIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 147/571 (25%), Positives = 258/571 (45%), Gaps = 78/571 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L C +L GK +H+ ++ + N + +Y KC L +A F+
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYAD-------- 108
+V S+N +L YA++ + LF Q+ PD V+Y L+ A+
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304
Query: 109 ---------------------------CGDT---ESALSLFKDMR--------------- 123
CGD + AL F D
Sbjct: 305 RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG 364
Query: 124 --EKRFD------TDGFTLSGLITASSNNLCLIKQ-------LHCLAIYCGFDHYASVNN 168
E+ F+ +DG ++ S N C + +H G + N
Sbjct: 365 HYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGN 424
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
SL++ Y+R G L A+ +F M + +D +SWN+++ Y + + EA++L+++M S +
Sbjct: 425 SLISMYARCGDLPRARELFNTMPK-RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
T +L+A T+ G H +++SG N H+ + L+++Y +C G + +
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRC-GSIMEAQN 542
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
VFE D++ WN+MI+G++Q Y + A F ++ + G PD +F V+ C N
Sbjct: 543 VFEGTRARDIISWNSMIAGHAQHGSY-EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPE 601
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG+QIH L I+ ++ + +++ NAL+ MY +CG+L+DA +F + N +S +MI
Sbjct: 602 ALELGRQIHMLIIESGLQLD-VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMI 660
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
G+A G +A LF M P TF S+L AC + + EG+K + + + G+
Sbjct: 661 GGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GY 719
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
E + + +I ++G +TDA ++ + MP
Sbjct: 720 ELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 254/502 (50%), Gaps = 45/502 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ +++ C +R L K +HA ++ V +LSN I +Y KC +S
Sbjct: 84 AYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVS--------- 134
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A Q+F ++P+ D++S+N+LIS YA G + A LF+
Sbjct: 135 ----------------------DAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFE 172
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ F T ++TA S L K++H I G+ V NSLL Y +
Sbjct: 173 EMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCE 232
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A++VF + +D VS+N+M+ Y Q E + LF +M S + D T ++L
Sbjct: 233 DLPSARQVFSGIYR-RDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLL 291
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
AFT+ L G + H + G + + +G+ L ++ +C GD+ + E D+
Sbjct: 292 DAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRC-GDVAGAKQALEAFADRDV 350
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG--KQIH 356
V++N +I+ +Q Y ++A + ++ G + +++ V++ACS S +LG + IH
Sbjct: 351 VVYNALIAALAQHGHY-EEAFEQYYQMRSDGVVMNRTTYLSVLNACST-SKALGAGELIH 408
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ ++ S+ + + N+L++MY++CG+L AR LF+ MP+ + +S N++IAGYA+
Sbjct: 409 SHISEVG-HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDR 467
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF--GFEPEGEHY 474
EA++L++ M + P +TF+ +LSAC ++ ++G+ + +D+ G + G
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKM---IHEDILRSGIKSNGHLA 524
Query: 475 SCMIDLLGRAGKLTDAERLIEA 496
+ ++++ R G + +A+ + E
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEG 546
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 280/708 (39%), Positives = 391/708 (55%), Gaps = 67/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G R++ G+ +HA+ ++ + Y K
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVR--------------MGYDK--------------- 235
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VF+ N L+ Y + R+ A +F+++P D+VS+N LIS G A+ L
Sbjct: 236 --DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 122 MREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + FTLS ++ A S L +Q+H I D + L+ Y++N F
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+A++VF M +D + N+++ EAL LF E+ LG++ TLA++L
Sbjct: 354 LDDARKVFDWMFH-RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ SLE Q HA +K GF ++H+ +GLID Y KCS + D +VFEE D++
Sbjct: 413 STASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSC-LSDANRVFEECSSGDII 471
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+MI+ SQ + + + A+ F ++ R G PD +++AC++LS GKQ+HA
Sbjct: 472 ACTSMITALSQCD-HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK + S+ + NALV Y+KCG++EDA F +PE VS ++MI G AQHG G
Sbjct: 531 LIKRQFMSDAFA-GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 589
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M++ I P +IT SVL AC H G V E ++YF+ MK+MFG + EHYSCMI
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 649
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAGKL DA L+ +MPF + + AA LEP +
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 709
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LAN YA++G W EVA +R+LM+D ++K+P SWIEVK ++H F+ D SHPM KE
Sbjct: 710 THVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKE 769
Query: 582 IHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ L E+ M +AG+VP +KE L HHSE+LAVAF LLST G PI
Sbjct: 770 IYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIR 829
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH A KFIS I REI +RD RFH F+DG CSCGDYW
Sbjct: 830 VKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 230/448 (51%), Gaps = 7/448 (1%)
Query: 50 LSAAHHAFNQTQHANVFSF-NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
L AH + + ++ SF N L++ Y++ R AR++FD+IP P VS+++L++AY++
Sbjct: 21 LPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 CGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN 168
G SA+ F MR + + F L ++ + L Q+H +A+ GF V N
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALP-VVLKCVPDARLGAQVHAMAMATGFGSDVFVAN 139
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
+L+ Y GF+D+A+RVF E ++ VSWN ++ AY ++ + +A+Q+F EMV +
Sbjct: 140 ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ + ++ A T ++ G Q HA +++ G+ ++ + L+D+Y K G +
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM-GRVDIASV 258
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+FE++P D+V WN +ISG + +A+ ++ G P+ + ++ ACS
Sbjct: 259 IFEKMPDSDVVSWNALISG-CVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG+QIH IK S+ + LV MY+K L+DAR++FD M + + N++I
Sbjct: 318 AFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+G + G EAL LF + + + T +VL + A + A + + GF
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL-EAASTTRQVHALAVKIGF 435
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ + +ID + L+DA R+ E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 230/504 (45%), Gaps = 54/504 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ-HA 63
V+ CV D G +HA+ + +++N + +Y G + A FN+
Sbjct: 108 VVLKCV--PDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N S+N L++AY + DQ CGD A+ +F +M
Sbjct: 166 NAVSWNGLMSAYVKN----------DQ------------------CGD---AIQVFGEMV 194
Query: 124 EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F S ++ A S N+ +Q+H + + G+D N+L+ Y + G +D
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A +F +M + D VSWN+++ + A++L +M L +++TL+SIL A
Sbjct: 255 IASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ G Q H +IK+ + +IG GL+D+YAK + + D KVF+ + DL+L
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK-NHFLDDARKVFDWMFHRDLILC 372
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
N +ISG S + D+AL F +L + G + + V+ + ++L + S +Q+HAL +
Sbjct: 373 NALISGCSHGGRH-DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAV 431
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
KI + V N L+ Y KC L DA R+F+ + ++ SMI +Q G A+
Sbjct: 432 KIGFIFD-AHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAI 490
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS------MMKDMFGFEPEGEHY 474
+LF ML + P S+L+ACA +G++ + M D F
Sbjct: 491 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-------G 543
Query: 475 SCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + G + DAE ++P
Sbjct: 544 NALVYTYAKCGSIEDAELAFSSLP 567
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 208/466 (44%), Gaps = 37/466 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +LK C G G+ +H +K Y+ + +Y+K
Sbjct: 305 TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK-------------- 350
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + AR++FD + DL+ N LIS + G + ALSLF
Sbjct: 351 ---NHF--------------LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++R++ + TL+ ++ TAS +Q+H LA+ GF A V N L+ Y +
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A RVF E D ++ SM+ A Q G A++LF EM+ L D + L+S+L
Sbjct: 454 CLSDANRVFEECSS-GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLL 512
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL G Q HAHLIK F ++ G+ L+ YAKC G + D F +P+ +
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC-GSIEDAELAFSSLPERGV 571
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V W+ MI G +Q + +AL F ++ G +P+ + V+ AC++ + +
Sbjct: 572 VSWSAMIGGLAQ-HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 359 TIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++K +R + + ++ + + G L+DA L + MP S+ + G ++
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDP 690
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
E +L L P + T V + + A G E K +MKD
Sbjct: 691 ELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKD 736
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 141/269 (52%), Gaps = 13/269 (4%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC--MKVF 290
T++ LT + + + L+ G HA L+KSG + + LI Y+KC R C +VF
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCR---RPCCARRVF 60
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+EIP P V W+++++ YS A+ F + G ++ + V+ +
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNN-GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD--AR 117
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAG 409
LG Q+HA+ + S+ + V NALVAMY G ++DARR+F+ E N VS N +++
Sbjct: 118 LGAQVHAMAMATGFGSD-VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y ++ +A+++F M+ + I PT F V++AC + + G++ +M+ M G++
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRM-GYDK 235
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++D+ + G++ A + E MP
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMP 264
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 280/708 (39%), Positives = 391/708 (55%), Gaps = 67/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G R++ G+ +HA+ ++ + Y K
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVR--------------MGYDK--------------- 235
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VF+ N L+ Y + R+ A +F+++P D+VS+N LIS G A+ L
Sbjct: 236 --DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 122 MREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + FTLS ++ A S L +Q+H I D + L+ Y++N F
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+A++VF M +D + N+++ EAL LF E+ LG++ TLA++L
Sbjct: 354 LDDARKVFDWMFH-RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ SLE Q HA +K GF ++H+ +GLID Y KCS + D +VFEE D++
Sbjct: 413 STASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSC-LSDANRVFEECSSGDII 471
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+MI+ SQ + + + A+ F ++ R G PD +++AC++LS GKQ+HA
Sbjct: 472 ACTSMITALSQCD-HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK + S+ + NALV Y+KCG++EDA F +PE VS ++MI G AQHG G
Sbjct: 531 LIKRQFMSDAFA-GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 589
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M++ I P +IT SVL AC H G V E ++YF+ MK+MFG + EHYSCMI
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 649
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAGKL DA L+ +MPF + + AA LEP +
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 709
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LAN YA++G W EVA +R+LM+D ++K+P SWIEVK ++H F+ D SHPM KE
Sbjct: 710 THVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKE 769
Query: 582 IHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ L E+ M +AG+VP +KE L HHSE+LAVAF LLST G PI
Sbjct: 770 IYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIR 829
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH A KFIS I REI +RD RFH F+DG CSCGDYW
Sbjct: 830 VKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 229/448 (51%), Gaps = 7/448 (1%)
Query: 50 LSAAHHAFNQTQHANVFSF-NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
L AH + + ++ SF N L++ Y++ R AR+ FD+IP P VS+++L++AY++
Sbjct: 21 LPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 CGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN 168
G SA+ F MR + + F L ++ + L Q+H +A+ GF V N
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALP-VVLKCVPDARLGAQVHAMAMATGFGSDVFVAN 139
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
+L+ Y GF+D+A+RVF E ++ VSWN ++ AY ++ + +A+Q+F EMV +
Sbjct: 140 ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ + ++ A T ++ G Q HA +++ G+ ++ + L+D+Y K G +
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM-GRVDIASV 258
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+FE++P D+V WN +ISG + +A+ ++ G P+ + ++ ACS
Sbjct: 259 IFEKMPDSDVVSWNALISG-CVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG+QIH IK S+ + LV MY+K L+DAR++FD M + + N++I
Sbjct: 318 AFDLGRQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+G + G EAL LF + + + T +VL + A + A + + GF
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL-EAASTTRQVHALAVKIGF 435
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ + +ID + L+DA R+ E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 230/504 (45%), Gaps = 54/504 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ-HA 63
V+ CV D G +HA+ + +++N + +Y G + A FN+
Sbjct: 108 VVLKCV--PDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N S+N L++AY + DQ CGD A+ +F +M
Sbjct: 166 NAVSWNGLMSAYVKN----------DQ------------------CGD---AIQVFGEMV 194
Query: 124 EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F S ++ A S N+ +Q+H + + G+D N+L+ Y + G +D
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A +F +M + D VSWN+++ + A++L +M L +++TL+SIL A
Sbjct: 255 IASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ G Q H +IK+ + +IG GL+D+YAK + + D KVF+ + DL+L
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK-NHFLDDARKVFDWMFHRDLILC 372
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
N +ISG S + D+AL F +L + G + + V+ + ++L + S +Q+HAL +
Sbjct: 373 NALISGCSHGGRH-DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAV 431
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
KI + V N L+ Y KC L DA R+F+ + ++ SMI +Q G A+
Sbjct: 432 KIGFIFD-AHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAI 490
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS------MMKDMFGFEPEGEHY 474
+LF ML + P S+L+ACA +G++ + M D F
Sbjct: 491 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA-------G 543
Query: 475 SCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + G + DAE ++P
Sbjct: 544 NALVYTYAKCGSIEDAELAFSSLP 567
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 208/466 (44%), Gaps = 37/466 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +LK C G G+ +H +K Y+ + +Y+K
Sbjct: 305 TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK-------------- 350
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + AR++FD + DL+ N LIS + G + ALSLF
Sbjct: 351 ---NHF--------------LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFY 393
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++R++ + TL+ ++ TAS +Q+H LA+ GF A V N L+ Y +
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A RVF E D ++ SM+ A Q G A++LF EM+ L D + L+S+L
Sbjct: 454 CLSDANRVFEECSS-GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLL 512
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL G Q HAHLIK F ++ G+ L+ YAKC G + D F +P+ +
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC-GSIEDAELAFSSLPERGV 571
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V W+ MI G +Q + +AL F ++ G +P+ + V+ AC++ + +
Sbjct: 572 VSWSAMIGGLAQ-HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 359 TIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++K +R + + ++ + + G L+DA L + MP S+ + G ++
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDP 690
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
E +L L P + T V + + A G E K +MKD
Sbjct: 691 ELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKD 736
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 140/269 (52%), Gaps = 13/269 (4%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC--MKVF 290
T++ LT + + + L+ G HA L+KSG + + LI Y+KC R C + F
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCR---RPCCARRFF 60
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+EIP P V W+++++ YS A+ F + G ++ + V+ +
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNN-GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD--AR 117
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAG 409
LG Q+HA+ + S+ + V NALVAMY G ++DARR+F+ E N VS N +++
Sbjct: 118 LGAQVHAMAMATGFGSD-VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y ++ +A+++F M+ + I PT F V++AC + + G++ +M+ M G++
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRM-GYDK 235
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++D+ + G++ A + E MP
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMP 264
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 272/725 (37%), Positives = 397/725 (54%), Gaps = 72/725 (9%)
Query: 20 SLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
++HAL L+ L P YL N + Y+ G L A F+ N+ + N LL+A AR
Sbjct: 31 AVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARA 90
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA----LSLFKDMREKRFDTDGFTL 134
+ +LF +PQ D VSYN L++ ++ G A ++L +D E T+
Sbjct: 91 GLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRD--EAGVRPSRITM 148
Query: 135 SGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG- 191
SG++ +S + L +Q+HC + GF YA + L+ Y++ G + +A+RVF EM
Sbjct: 149 SGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEG 208
Query: 192 -----------------------------EIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
E +D ++W +MV Q+ EAL +F+ M
Sbjct: 209 KNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM 268
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ +G+D YT SILTA +L L G Q HA++ ++ + N +GS L+D+Y+KC
Sbjct: 269 RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCR-S 327
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+R VF + +++ W MI GY Q ++A+ F ++ R G PDD + VIS
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNG-CGEEAVRVFSEMQRDGIKPDDFTLGSVIS 386
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+C+NL S G Q H L + +R ++V+NALV +Y KCG++EDA RLFD M H+ V
Sbjct: 387 SCANLASLEEGAQFHCLALVSGLRPY-VTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 445
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S +++ GYAQ G E + LFE ML + P +TF+ VLSAC+ +G V +G+ YF M
Sbjct: 446 SWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSM 505
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------I 504
+ P +HY+CMIDL R+G L AE I+ MP P + I
Sbjct: 506 QQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEI 565
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA + L+L+P N YV+L +++A+ G+W +VA +RR MRDR V+K+PG SWI+ K
Sbjct: 566 GKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKN 625
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
++H+F A+D SHP + I+ L+ ++ KM + GY PD K L HHSEK
Sbjct: 626 KVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEK 685
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AFGL+ PI ++KNLR+C DCHNA KFIS I GR+I VRD RFH F +G CS
Sbjct: 686 LAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICS 745
Query: 673 CGDYW 677
CGD+W
Sbjct: 746 CGDFW 750
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +HA + + ++ + + +YSKC + A F +
Sbjct: 279 TFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM 338
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ S+ ++ Y + CG E A+ +F
Sbjct: 339 MWKNIISWTAMIVGYGQN-----------------------------GCG--EEAVRVFS 367
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D FTL +I++ +N L + Q HCLA+ G Y +V+N+L+T Y + G
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG 427
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VSW ++V+ Y Q + E + LF++M+S + D T +L
Sbjct: 428 SIEDAHRLFDEM-SFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVL 486
Query: 239 TAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ- 295
+A S LV G FH+ + +IDLY++ SG ++ + +++P+
Sbjct: 487 SA-CSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSR-SGWLKQAEEFIKQMPRC 544
Query: 296 PDLVLWNTMISG 307
PD W T++S
Sbjct: 545 PDAFGWATLLSA 556
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/653 (39%), Positives = 379/653 (58%), Gaps = 36/653 (5%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
N ++ L+ YA+ RQ+F+++ DL+++NT+I A+ G E A
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCY 174
++ M+ + + T L+ A N+ L K++H GF V N+L++ Y
Sbjct: 314 EVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMY 373
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
SR G + +A+ VF +M KD +SW +M+ + G EAL ++QEM + + T
Sbjct: 374 SRCGSIKDARLVFDKMVR-KDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
SIL A +S L G + H ++++G ++H+G+ L+++Y+ C G ++D +VF+ +
Sbjct: 433 TSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMC-GSVKDARQVFDRMI 491
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGK 353
Q D+V +N MI GY+ +AL F +L G PD +++ +++AC+N S +
Sbjct: 492 QRDIVAYNAMIGGYA-AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR 550
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IH L K S+ SV NALV+ Y+KCG+ DA +F++M + N +S N++I G AQH
Sbjct: 551 EIHTLVRKGGFFSD-TSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQH 609
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G +AL+LFE M + P +TFVS+LSAC+H G + EG++YF M F P EH
Sbjct: 610 GRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEH 669
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y CM+DLLGRAG+L +AE LI+ MPF + +A +AA L+L+
Sbjct: 670 YGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLD 729
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
NAV YV L+++YAA+G W+ A +R+LM RGV K+PG SWI+V ++H FVAED SH
Sbjct: 730 LDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSH 789
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P ++I+ L+ ++ MK GYVPD KE + HHSE+LA+A+GL+ST
Sbjct: 790 PQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPP 849
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KNLR+C DCH A KFIS I REI RD RFH FKDG CSCGDYW
Sbjct: 850 GTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 154/570 (27%), Positives = 274/570 (48%), Gaps = 56/570 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++LK C+ +DLV G+ +H +++ Y N I +Y +CG + A + +
Sbjct: 26 YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLS 85
Query: 62 HA--NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ V S+N ++ Y + I A +L Q+ Q L T I ++ + AL
Sbjct: 86 YMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWG 145
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+++H A+ G V N +L Y++ G
Sbjct: 146 -----------------------------REIHFQAMQAGLLFDVKVANCILNMYAKCGS 176
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++EA+ VF +M E K VSW + Y A ++FQ+M + + T S+L
Sbjct: 177 IEEAREVFDKM-EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
AF+S L G H+ ++ +G ++ +G+ L+ +YAKC G +DC +VFE++ DL+
Sbjct: 236 AFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKC-GSYKDCRQVFEKLVNRDLI 294
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WNTMI G ++ Y ++A + ++ R G P+ ++V +++AC N + GK+IH+
Sbjct: 295 AWNTMIGGLAEG-GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSR 353
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
K S+ I V NAL++MYS+CG+++DAR +FD+M + +S +MI G A+ G G E
Sbjct: 354 VAKAGFTSD-IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAE 412
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +++ M + + P +T+ S+L+AC+ + G++ + + G + + ++
Sbjct: 413 ALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDAHVGNTLV 471
Query: 479 DLLGRAGKLTDAERLIEAM----------------PFNPGSIALKAANHFLQ--LEPSNA 520
++ G + DA ++ + M N G ALK + + L+P +
Sbjct: 472 NMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DK 530
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRG 550
V Y+ + N A SG E I L+R G
Sbjct: 531 VTYINMLNACANSGSLEWAREIHTLVRKGG 560
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 242/432 (56%), Gaps = 8/432 (1%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N +L YA+ I AR++FD++ + +VS+ I YADCG +E+A +F+ M ++
Sbjct: 165 NCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVV 224
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T ++ A S+ L K +H + G + +V +L+ Y++ G + ++V
Sbjct: 225 PNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQV 284
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F ++ +D ++WN+M+ + EA +++ +M + + T +L A +
Sbjct: 285 FEKLVN-RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAA 343
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G + H+ + K+GF + + + LI +Y++C G ++D VF+++ + D++ W MI
Sbjct: 344 LHWGKEIHSRVAKAGFTSDIGVQNALISMYSRC-GSIKDARLVFDKMVRKDVISWTAMIG 402
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
G + K + +AL ++++ + G P+ ++ +++ACS+ + G++IH ++ +
Sbjct: 403 GLA-KSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLA 461
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
++ V N LV MYS CG+++DAR++FDRM + + V+ N+MI GYA H +G EAL+LF+
Sbjct: 462 TD-AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
+ E + P +T++++L+ACA++G + ++ ++++ GF + + ++ + G
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRK-GGFFSDTSVGNALVSTYAKCG 579
Query: 486 KLTDAERLIEAM 497
+DA + E M
Sbjct: 580 SFSDASIVFEKM 591
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 203/389 (52%), Gaps = 28/389 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEV-SWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
N+L+ Y + G ++EA++V+ ++ ++ V SWN+MVV Y Q+ +AL+L ++M
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
L D T+ S L++ S L G + H +++G + + + ++++YAKC G + +
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKC-GSIEEA 180
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+VF+++ + +V W I GY+ S+ A F+K+ + G P+ +++ V++A S
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGR-SETAFEIFQKMEQEGVVPNRITYISVLNAFS- 238
Query: 347 LSPS---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
SP+ GK +H+ + S+ +V ALV MY+KCG+ +D R++F+++ + ++
Sbjct: 239 -SPAALKWGKAVHSRILNAGHESD-TAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 296
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI G A+ G EA ++ M + P IT+V +L+AC ++ + G++ S +
Sbjct: 297 NTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAK 356
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPY 523
GF + + +I + R G + DA RL+ F ++ + + +
Sbjct: 357 A-GFTSDIGVQNALISMYSRCGSIKDA-RLV-----------------FDKMVRKDVISW 397
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ A SG E T+ + M+ GV+
Sbjct: 398 TAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 153/311 (49%), Gaps = 25/311 (8%)
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL--W 301
++DLV G Q H H+I+ + + + LI++Y +C G + + +V++++ + + W
Sbjct: 36 VKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQC-GSIEEARQVWKKLSYMERTVHSW 94
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N M+ GY Q Y ++AL +++ + G PD + + +S+C + G++IH +
Sbjct: 95 NAMVVGYIQYG-YIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAM 153
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + + + V N ++ MY+KCG++E+AR +FD+M + + VS I GYA G A
Sbjct: 154 QAGLLFD-VKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAF 212
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+F+ M + + P IT++SVL+A + + G+ S + + G E + + ++ +
Sbjct: 213 EIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNA-GHESDTAVGTALVKM 271
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
+ G D ++ E +L + + + + A G WEE +
Sbjct: 272 YAKCGSYKDCRQVFE------------------KLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 541 TIRRLMRDRGV 551
+ M+ GV
Sbjct: 314 EVYNQMQREGV 324
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 142/312 (45%), Gaps = 43/312 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L C L G+ +H ++ + A++ N + +YS CG + A F++
Sbjct: 431 TYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ ++N ++ YA A +LFD++ + PD V+Y +++A A+ G E A
Sbjct: 491 IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWA- 549
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+++H L GF SV N+L++ Y++
Sbjct: 550 --------------------------------REIHTLVRKGGFFSDTSVGNALVSTYAK 577
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +A VF +M + ++ +SWN+++ QH G +ALQLF+ M + D+ T S
Sbjct: 578 CGSFSDASIVFEKMTK-RNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVS 636
Query: 237 ILTAFTSLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L+A + L G ++ + + + H G ++DL + +G + + + + +P
Sbjct: 637 LLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC-MVDLLGR-AGQLDEAEALIKTMP 694
Query: 295 -QPDLVLWNTMI 305
Q + +W ++
Sbjct: 695 FQANTRIWGALL 706
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/746 (35%), Positives = 399/746 (53%), Gaps = 105/746 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C L G+ +H + + ++ I +YSKCG +S A F++
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV S+ ++ A A+ ++ A +L++Q+ Q P+ V++ +L+++ C E+
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNS---CNTPEA-- 273
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L +++H G + V N+L+T Y +
Sbjct: 274 ----------------------------LNRGRRIHSHISERGLETDMIVANALITMYCK 305
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ----HREGL-EALQLFQEMVSLQLGLDM 231
+ EA+ +F M + +D +SW++M+ Y Q +E + E QL + M + +
Sbjct: 306 CNSVQEAREIFDRMSK-RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNK 364
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----------- 280
T SIL A T+ L G Q HA L K GF + + + + ++YAKC
Sbjct: 365 VTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424
Query: 281 -------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
GD+ KVF E+P ++V WN MI+GY+Q + +
Sbjct: 425 MANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIV-KVFEL 483
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ G+ PD + + ++ AC L+ GK +HA +K+ + S+ + V +L+ MYS
Sbjct: 484 LSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTV-VATSLIGMYS 542
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG + +AR +FD+M +TV+ N+M+AGY QHG G+EA+ LF+ ML+ + P IT +
Sbjct: 543 KCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTA 602
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
V+SAC+ G V EG++ F MM++ F P +HY CM+DLLGRAG+L +AE I++MP
Sbjct: 603 VISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCE 662
Query: 501 PG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P +A +AA+H L+LEPS A Y+ L+NIYA +G+W++ +R
Sbjct: 663 PDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVR 722
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-- 601
R+M DRG++K G S IE+ ++H FVAED +HP I IH LE ++++MK+AGY PD
Sbjct: 723 RVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMR 782
Query: 602 ----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
KEK L HHSEKLA+A+GLL T G PI +MKNLR+CGDCH A KFIS I
Sbjct: 783 FVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIR 842
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI RD RFH F +G CSCGD+W
Sbjct: 843 KREIVARDANRFHYFNNGTCSCGDFW 868
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 242/482 (50%), Gaps = 41/482 (8%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+++ N L+ Y++ +ASA Q+F ++ D+V+++++I+AYA A F+ M
Sbjct: 90 DIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + T ++ A +N L K ++H + G + +V +L+T YS+ G +
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A VF++M E ++ VSW +++ A QHR+ EA +L+++M+ + + T S+L +
Sbjct: 210 VACEVFHKMTE-RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSC 268
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ E L G + H+H+ + G + + + LI +Y KC+ +++ ++F+ + + D++ W
Sbjct: 269 NTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS-VQEAREIFDRMSKRDVISW 327
Query: 302 NTMISGYSQK----EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIH 356
+ MI+GY+Q +E D+ +++ R G P+ +F+ ++ AC+ + + G+QIH
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387
Query: 357 ALTIKIEI---RSNRISVNN---------------------------ALVAMYSKCGNLE 386
A K+ RS + ++ N + ++MY KCG+L
Sbjct: 388 AELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLS 447
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A ++F MP N VS N MIAGYAQ+G ++ L M P +T +++L AC
Sbjct: 448 SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACG 507
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
+ G K G E + + +I + + G++ +A + + M N ++A
Sbjct: 508 ALAGLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAW 565
Query: 507 KA 508
A
Sbjct: 566 NA 567
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 207/408 (50%), Gaps = 28/408 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ NSL+ YS+ + A++VF M ++D V+W+SM+ AY + +A F+ M
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRM-TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDA 151
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + T SIL A + L G + H + G + + + LI +Y+KC G++
Sbjct: 152 NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKC-GEISV 210
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+VF ++ + ++V W +I +Q + ++A ++++ + G P+ +FV ++++C
Sbjct: 211 ACEVFHKMTERNVVSWTAIIQANAQHRKL-NEAFELYEQMLQAGISPNAVTFVSLLNSC- 268
Query: 346 NLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
N +L G++IH+ + + ++ I V NAL+ MY KC ++++AR +FDRM + + +S
Sbjct: 269 NTPEALNRGRRIHSHISERGLETDMI-VANALITMYCKCNSVQEAREIFDRMSKRDVISW 327
Query: 404 NSMIAGYAQHGIG-----MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
++MIAGYAQ G E +L E M + P +TF+S+L AC G + +G++
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL------------ 506
+ + + GFE + + + ++ + G + +AE++ M N +A
Sbjct: 388 AELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLSMYIKCGD 445
Query: 507 --KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
A F ++ N V + ++ YA +G +V + M+ G Q
Sbjct: 446 LSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ 493
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 14/179 (7%)
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNL-----SPSLGKQIHALTIKIEIRSNRISV 371
Q LG K+ G + ++ CVI C+ + KQ+ L ++I+I +
Sbjct: 42 QLLGIIKQR---GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDI-----YL 93
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N+L+ YSK ++ A ++F RM + V+ +SMIA YA + +A FE M + NI
Sbjct: 94 GNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P ITF+S+L AC + + +G+K +++K M G E + + +I + + G+++ A
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAM-GMETDVAVATALITMYSKCGEISVA 211
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 275/773 (35%), Positives = 412/773 (53%), Gaps = 120/773 (15%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+++HA + + Y+ N I +Y K L +AHH F++ + ++ + L+AA++
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 78 QLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
AR++F P D V YN +I+ Y+ D A+ LF+D+ F D FT +
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153
Query: 136 GLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTC--------------- 173
++ A L LI +Q+HC + G SV N+LL+
Sbjct: 154 SVLGA----LALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSL 209
Query: 174 -------------------------YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
Y RNG LD A++ M E K V+WN+M+ Y
Sbjct: 210 MAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTE-KLVVAWNAMISGYVH 268
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS----GFHQ 264
H LEAL++F++M L + D +T S+L+A + + G Q HA+++++
Sbjct: 269 HGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDF 328
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ-------------- 310
+ + + L LY KC G + + +VF ++P DLV WN ++SGY
Sbjct: 329 SLSVNNALATLYWKC-GKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEM 387
Query: 311 ----------------KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GK 353
+ + +++L F ++ G+ P D +F I AC+ L+ + G+
Sbjct: 388 PERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGR 447
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q+HA +++ S+ +S NAL+ MY+KCG +E A LF MP ++VS N+MIA QH
Sbjct: 448 QLHAQLVRLGFDSS-LSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQH 506
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G +AL LFE ML+ +I P ITF++VLS C+H G V EG +YF M ++G P +H
Sbjct: 507 GHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDH 566
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y+ MIDLL RAGK ++A+ +IE MP PG + ++AA +L
Sbjct: 567 YARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELM 626
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + YV+L+N+YA G+W++VA +R+LMRD+GV+K+PG SWIEV+ ++HVF+ +D H
Sbjct: 627 PQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVH 686
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P ++ ++NYLEE+ KM++ GY+PD KE L HSEKLAV FGLL
Sbjct: 687 PEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPL 746
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V KNLRICGDCHNA KF+S + REI VRD RFH FK+G CSCG+YW
Sbjct: 747 GATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 34/327 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN----LVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T+ VL C + GK +HA L+ + FS ++N LY KCG + A
Sbjct: 293 TYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQV 352
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
FNQ ++ S+N +L+ Y RI A+ F+++P+ +L+++ +IS A G E +L
Sbjct: 353 FNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESL 412
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCY 174
LF M+ + F+ + +G I A + L+ +QLH + GFD S N+L+T Y
Sbjct: 413 KLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMY 472
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G ++ A +F M + D VSWN+M+ A GQH G +AL+LF+ M+ + D T
Sbjct: 473 AKCGVVEAAHCLFLTMPYL-DSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITF 531
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL-------------IDLYAKCSG 281
++L+ + HA L++ G H+ SGL IDL + +G
Sbjct: 532 LTVLSTCS-----------HAGLVEEG-HRYFKSMSGLYGICPGEDHYARMIDLLCR-AG 578
Query: 282 DMRDCMKVFEEIP-QPDLVLWNTMISG 307
+ + E +P +P +W +++G
Sbjct: 579 KFSEAKDMIETMPVEPGPPIWEALLAG 605
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/679 (37%), Positives = 396/679 (58%), Gaps = 54/679 (7%)
Query: 41 ILLYSKCGCLSAAHHA--FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVS 98
+L+ +C L+ + HA + +N F L+ AYA + SARQ FD I D+VS
Sbjct: 50 LLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVS 109
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA----------SSNNLCLI 148
+ +++ YA+ + +L LF +MR F+ + FT +G++ A S + C++
Sbjct: 110 WTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVL 169
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K + + +Y G LL Y++ G ++ RVF EM + D + W+ M+ Y Q
Sbjct: 170 KTCYEMDLYVGV--------GLLDLYTKFGDANDVLRVFEEMPK-HDVIPWSFMISRYAQ 220
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA++LF +M + + +T AS+L + S+E+L G Q H H++K G N +
Sbjct: 221 SNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFV 280
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+D+YAKC G + + MK+F E+P + V WNTMI GY Q + D+AL +K +
Sbjct: 281 SNALMDVYAKC-GRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGD-GDKALSLYKNMLEC 338
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
+ ++ V+ AC++L+ LG QIH+L++K I + V NAL+ MY+KCG++++
Sbjct: 339 QVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT-IYDKDVVVGNALIDMYAKCGSIKN 397
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
AR +FD + E + +S N+MI+GY+ HG+ EAL+ F+ M ET P +TFVS+LSAC++
Sbjct: 398 ARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSN 457
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG----- 502
G + GQ YF M +G EP EHY+CM+ LLGR+G L A +LIE +P P
Sbjct: 458 AGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWR 517
Query: 503 ------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+ + +A LQ++P + +V+L+NIYA + +W VA++R+ M+++G
Sbjct: 518 ALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKG 577
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K+PG SWIE + +H F D SHP +K I LE ++ K ++AGYVPD
Sbjct: 578 VKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVE 637
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
K++ L HSE+LA+AFGL+ T I ++KNLRIC DCH+AIK IS I R+I +R
Sbjct: 638 DDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIR 697
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFH F+DG CSCGDYW
Sbjct: 698 DMNRFHHFQDGICSCGDYW 716
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 223/421 (52%), Gaps = 9/421 (2%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LI 148
+P + VS+ TLI Y + + LF + + + + F + ++ + C L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
LH G + A V +L+ Y+ G ++ A++ F + KD VSW MV Y +
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA-CKDMVSWTGMVACYAE 119
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ ++LQLF EM + + +T A +L A LE G H ++K+ + + ++
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G GL+DLY K GD D ++VFEE+P+ D++ W+ MIS Y+Q + S +A+ F ++ R
Sbjct: 180 GVGLLDLYTK-FGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQ-SREAVELFGQMRRA 237
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
P+ +F V+ +C+++ LGKQ+H +K+ + N + V+NAL+ +Y+KCG L++
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGN-VFVSNALMDVYAKCGRLDN 296
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ +LF +P N V+ N+MI GY Q G G +AL L++ MLE + + +T+ SVL ACA
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
+ G + S+ ++ + + +ID+ + G + +A RL+ M I+
Sbjct: 357 LAAMELGTQIHSLSLKTI-YDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWN 414
Query: 508 A 508
A
Sbjct: 415 A 415
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 206/412 (50%), Gaps = 37/412 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C+G GKS+H LK Y+ + LY+K G
Sbjct: 144 TFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFG------------ 191
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AN +VL ++F+++P+ D++ ++ +IS YA + A+ LF
Sbjct: 192 -DAN----DVL--------------RVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG 232
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + FT + ++ AS NL L KQ+HC + G D V+N+L+ Y++ G
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD + ++F E+ ++EV+WN+M+V Y Q +G +AL L++ M+ Q+ T +S+L
Sbjct: 293 RLDNSMKLFMELPN-RNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVL 351
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL + G Q H+ +K+ + ++ +G+ LID+YAKC G +++ VF+ + + D
Sbjct: 352 RACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKC-GSIKNARLVFDMLSERDE 410
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
+ WN MISGYS +AL F+ + P+ +FV ++SACSN +G+
Sbjct: 411 ISWNAMISGYSM-HGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFK 469
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
++ + +V + + G+L+ A +L + +P V + + G
Sbjct: 470 SMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLG 521
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 261/709 (36%), Positives = 398/709 (56%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C GK +H L++ + + +L+N + +Y +CG L A + F T
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q +V S+N ++A +A+ G E+A LF+
Sbjct: 493 QARDVISWNSMIAGHAQH-------------------------------GSYETAYKLFQ 521
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ + + D T + +++ N L L KQ+H G ++ N+L+ Y R G
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCG 581
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A+ VF+ + + +D +SW +M+ E ++A++LF +M + T +SIL
Sbjct: 582 SLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSIL 640
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
TS L G + A+++ SG+ ++ +G+ LI Y+K SG M D +VF+++P D+
Sbjct: 641 KVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSK-SGSMTDAREVFDKMPSRDI 699
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN +I+GY+Q A+ ++ P+ SFV +++ACS+ S GK++HA
Sbjct: 700 VSWNKIIAGYAQN-GLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHA 758
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K +++ + + V AL++MY+KCG+ +A+ +FD + E N V+ N+MI YAQHG+
Sbjct: 759 EIVKRKLQGD-VRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLAS 817
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL F M + I P TF S+LSAC H G V EG + FS M+ +G P EHY C+
Sbjct: 818 KALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCL 877
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSNA 520
+ LLGRA + +AE LI MPF P G+IAL AAN+ L+L N
Sbjct: 878 VGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNP 937
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L+N+YAA+G+W++VA IRR+M RG++K+PG SWIEV +H F+A D SHP
Sbjct: 938 AVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 997
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ L+ +S +M++AGY PD +E L HSE+LA+A+GL+ T G PI
Sbjct: 998 EIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPI 1057
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLRICGDCH A KFIS + GREI RD+ RFH FK+G+CSC DYW
Sbjct: 1058 RIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 260/502 (51%), Gaps = 45/502 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C +R L K +HA ++ V +LSN I +Y KC + AH
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH------ 82
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+F ++P+ D++S+N+LIS YA G + A LF+
Sbjct: 83 -------------------------QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFE 117
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ F + T ++TA S L K++H I G+ V NSLL+ Y + G
Sbjct: 118 EMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG 177
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A++VF + +D VS+N+M+ Y Q E L LF +M S + D T ++L
Sbjct: 178 DLPRARQVFAGISP-RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
AFT+ L G + H ++ G + + +G+ L+ + +C GD+ + F+ D+
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC-GDVDSAKQAFKGTADRDV 295
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
V++N +I+ +Q ++ +A + ++ G + +++ +++ACS S +L GK IH
Sbjct: 296 VVYNALIAALAQ-HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST-SKALEAGKLIH 353
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ I + S+ + + NAL++MY++CG+L AR LF MP+ + +S N++IAGYA+
Sbjct: 354 S-HISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR 412
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF--GFEPEGEHY 474
EA+RL++ M + P +TF+ +LSACA++ A+G+ + +D+ G + G
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM---IHEDILRSGIKSNGHLA 469
Query: 475 SCMIDLLGRAGKLTDAERLIEA 496
+ ++++ R G L +A+ + E
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEG 491
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 188/355 (52%), Gaps = 14/355 (3%)
Query: 149 KQLHCLAI--YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K++H + + G D + S N L+ Y + + +A +VF EM +D +SWNS++ Y
Sbjct: 47 KRIHAQMVEAWVGPDIFLS--NLLINMYVKCRSVLDAHQVFKEMPR-RDVISWNSLISCY 103
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q +A QLF+EM + + T SILTA S +L G + H+ +IK+G+ ++
Sbjct: 104 AQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDP 163
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + L+ +Y KC GD+ +VF I D+V +NTM+ Y+QK Y + LG F +++
Sbjct: 164 RVQNSLLSMYGKC-GDLPRARQVFAGISPRDVVSYNTMLGLYAQKA-YVKECLGLFGQMS 221
Query: 327 RVGYHPDDCSFVCVISACSNLSPSL---GKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
G PD +++ ++ A + +PS+ GK+IH LT++ + S+ I V ALV M +CG
Sbjct: 222 SEGISPDKVTYINLLDAFT--TPSMLDEGKRIHKLTVEEGLNSD-IRVGTALVTMCVRCG 278
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+++ A++ F + + V N++IA AQHG +EA + M + T++S+L+
Sbjct: 279 DVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILN 338
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
AC+ T K E K G + + + +I + R G L A L MP
Sbjct: 339 ACS-TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP 392
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 273/737 (37%), Positives = 400/737 (54%), Gaps = 73/737 (9%)
Query: 11 GRRDLVTGKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFN 69
GR ++H L L+ L P Y+ NH + Y++ G L A F+ N+F+ N
Sbjct: 21 GRDGARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRN 80
Query: 70 VLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
LL+A A + +LF +PQ D VSYN LI+ ++ G A ++ + +
Sbjct: 81 ALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVV 140
Query: 130 DG-------FTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
DG T+SG++ A+S + L +Q+HC + GF YA + L+ Y++ G +
Sbjct: 141 DGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLI 200
Query: 181 DEAKRVFYEM-------------GEIK-----------------DEVSWNSMVVAYGQHR 210
+AKRVF EM G ++ D ++W +MV Q+
Sbjct: 201 GDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNG 260
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EAL +F+ M + +G+D YT SILTA +L G Q HA+ I++ + N +GS
Sbjct: 261 LQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGS 320
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
L+D+Y+KC +R VF + +++ W MI GY Q ++A+ F ++ G
Sbjct: 321 ALVDMYSKCR-SIRLAEAVFRRMTCKNIISWTAMIVGYGQNG-CGEEAVRVFSEMQTDGI 378
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+D + VIS+C+NL S G Q H + + +R I+V++ALV +Y KCG++EDA
Sbjct: 379 KPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPY-ITVSSALVTLYGKCGSIEDAH 437
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
RLFD MP H+ VS ++++GYAQ G E + LFE ML + P +TF+ VLSAC+ +G
Sbjct: 438 RLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSG 497
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-- 507
V +G YF M+ G +HY+CMIDL R+G+L +AE I MP P +I
Sbjct: 498 LVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATL 557
Query: 508 ---------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA + L+ +P N YV+L +++A+ G+W EVA +RR MRDR V+
Sbjct: 558 LSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVK 617
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K+PG SWI+ K ++H+F A+D SHP I+ L+ ++ KM + GY PD
Sbjct: 618 KEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADA 677
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
K L +HSEKLA+AFGL+ PI V+KNLR+C DCHNA KFIS I GR+I VRD
Sbjct: 678 EKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDA 737
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH F +G CSCGD+W
Sbjct: 738 VRFHKFSNGICSCGDFW 754
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C GK +HA ++ L + ++ + + +YSKC + A F +
Sbjct: 283 TFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRM 342
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ S+ ++ Y + CG E A+ +F
Sbjct: 343 TCKNIISWTAMIVGYGQN-----------------------------GCG--EEAVRVFS 371
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ + FTL +I++ +N L + Q HC+A+ G Y +V+++L+T Y + G
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG 431
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VS+ ++V Y Q + E + LF++M+ + + T +L
Sbjct: 432 SIEDAHRLFDEM-PFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVL 490
Query: 239 TAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ- 295
+A S LV G FH+ G + +IDLY++ SG +++ + ++P+
Sbjct: 491 SA-CSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSR-SGRLKEAEEFIRQMPRC 548
Query: 296 PDLVLWNTMISG 307
PD + W T++S
Sbjct: 549 PDAIGWATLLSA 560
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 271/712 (38%), Positives = 392/712 (55%), Gaps = 75/712 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G RDL G+ +HA+ ++ + +N + +YSK G
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLG------------- 251
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+R+A+ +F ++P+ D+VS+N IS G + AL L
Sbjct: 252 ----------------DIRMAAV--VFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + FTLS ++ A S L +Q+H + D + L+ Y+++G
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+AK+VF + + +D V WN+++ + EAL LF M ++ TLA++L
Sbjct: 354 LDDAKKVFDWIPQ-RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLK 412
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM----KVFEEIPQ 295
+ SLE + Q HA K GF +SH+ +GLID Y KC DC+ +VFE+
Sbjct: 413 STASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKC-----DCLNYAYRVFEKHGS 467
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D++ + +MI+ SQ + + + A+ F ++ R G PD +++AC++LS GKQ
Sbjct: 468 YDIIAFTSMITALSQCD-HGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA IK + S+ + NALV Y+KCG++EDA F +PE VS ++MI G AQHG
Sbjct: 527 VHAHLIKRQFMSD-VFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHG 585
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G AL +F M++ +I P +IT SVL AC H G V E ++YF+ MK+MFG E EHY
Sbjct: 586 HGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHY 645
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
+CMIDLLGRAGKL DA L+ +MPF + + AA LEP
Sbjct: 646 ACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEP 705
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ +V+LAN YA++G W++VA +R+LM+D V+K+P SW+E+K ++H F+ D SHP
Sbjct: 706 EKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHP 765
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
++I+ L+E+ M +AGYVP +KE L HHSE+LAVAF L+ST G
Sbjct: 766 RARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAG 825
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI V KNLRIC DCH A KFIS I REI +RD RFH F+DG CSC DYW
Sbjct: 826 APIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 224/428 (52%), Gaps = 6/428 (1%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL+ Y++ SAR++FD+IP P VS+++L++AY++ AL F+ MR
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVR 100
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ F L ++ + + QLH LA+ G V N+L+ Y GF+DEA+ VF
Sbjct: 101 CNEFVLP-VVLKCAPDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFD 159
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
E G ++ VSWN ++ AY ++ A+++F EMV + + + + ++ A T DL
Sbjct: 160 EAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE 219
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G + HA +I++G+ ++ + L+D+Y+K GD+R VF ++P+ D+V WN ISG
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKL-GDIRMAAVVFGKVPETDVVSWNAFISG- 277
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
+ AL ++ G P+ + ++ AC+ +LG+QIH +K S+
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSD 337
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ LV MY+K G L+DA+++FD +P+ + V N++I+G + EAL LF M
Sbjct: 338 NY-IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMR 396
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ T +VL + A +++ ++ ++ + + GF + + +ID + L
Sbjct: 397 KEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL-GFLSDSHVVNGLIDSYWKCDCL 455
Query: 488 TDAERLIE 495
A R+ E
Sbjct: 456 NYAYRVFE 463
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 217/471 (46%), Gaps = 47/471 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +LK C G G+ +H +K Y++ + +Y+K G L
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLD--------- 355
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A+++FD IPQ DLV +N LIS + ALSLF
Sbjct: 356 ----------------------DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFC 393
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR++ FD + TL+ ++ TAS + +Q+H LA GF + V N L+ Y +
Sbjct: 394 RMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCD 453
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ A RVF + G D +++ SM+ A Q G +A++LF EM+ L D + L+S+L
Sbjct: 454 CLNYAYRVFEKHGSY-DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLL 512
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL G Q HAHLIK F + G+ L+ YAKC G + D F +P+ +
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKC-GSIEDADLAFSGLPEKGV 571
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V W+ MI G +Q + +AL F ++ P+ + V+ AC++ + +
Sbjct: 572 VSWSAMIGGLAQ-HGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 359 TIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH--- 413
++K R + A ++ + + G L+DA L + MP + N +++A H
Sbjct: 631 SMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDP 690
Query: 414 GIG-MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+G + A +LF +LE T++ + ++ VA+ +K +MKD
Sbjct: 691 ELGRLAAEKLF--ILEPEKSGTHVLLANTYASAGMWDDVAKVRK---LMKD 736
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 153/315 (48%), Gaps = 36/315 (11%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC--SGDMRDCMK 288
+ T+ +LT + + + L+ G HAHL+KSG + + L+ Y+KC G R +
Sbjct: 4 LETIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSAR---R 58
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC---VISACS 345
VF+EIP P V W+++++ YS D ALG F+ + CS C V+
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNAMPRD-ALGAFRSMR-------SCSVRCNEFVLPVVL 110
Query: 346 NLSP--SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVS 402
+P G Q+HAL + + + I V NALVAMY G +++AR +FD E NTVS
Sbjct: 111 KCAPDAGFGTQLHALAMATGLGGD-IFVANALVAMYGGFGFVDEARMVFDEAGCERNTVS 169
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM- 461
N +++ Y ++ A+++F M+ + P F V++AC + + G+K +M+
Sbjct: 170 WNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVI 229
Query: 462 -----KDMFGFEPEGEHYSCMIDLLGRA---GKLTDAERLIEAMPFNPGSIALKAANH-- 511
KD+F + YS + D+ A GK+ + + ++ F G + H
Sbjct: 230 RTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD-VVSWNAFISGCVLHGHDQHAL 288
Query: 512 --FLQLEPSNAVPYV 524
LQ++ S VP V
Sbjct: 289 ELLLQMKSSGLVPNV 303
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/772 (34%), Positives = 422/772 (54%), Gaps = 118/772 (15%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+ +HA + + ++ N I +YSK L+ A + F++ ++ + L+AAY+
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91
Query: 78 QLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ +R++F P D V YN +I+AY+ D +A+ LF DM+ F D +T +
Sbjct: 92 AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151
Query: 136 GLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYSR---------NGF 179
++ A L L+ +QLHC + G SV N+L++ Y + +
Sbjct: 152 SVLGA----LALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSL 207
Query: 180 LDEAKRVFYEM-------------GEIKDE-----------------VSWNSMVVAYGQH 209
+ EA+++F EM G +K+ V+WN+M+ Y
Sbjct: 208 MAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHR 267
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
LEA ++F++M+ ++ LD +T S+++ + G + HA+ +K+ + +
Sbjct: 268 GLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327
Query: 270 ----SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ--------------- 310
+ LI Y KC G + ++F ++P+ DLV WN ++SGY
Sbjct: 328 MPVNNALITFYWKC-GKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMP 386
Query: 311 ---------------KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
+ ++++AL F ++ G+ P D +F I +CS L S G+Q
Sbjct: 387 EKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ 446
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA ++ S+ +S NAL+ MY++CG ++ A LF MP + +S N+MIA QHG
Sbjct: 447 LHAQVVRYGYESS-LSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHG 505
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G +A+ LFE ML+ I P I+F++V+SAC+H G V EG+KYF M +++G P+ EHY
Sbjct: 506 QGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHY 565
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
+ +IDLL RAGK ++A+ ++E+MPF PG+ + ++AA +L+P
Sbjct: 566 ARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKP 625
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ YV+L+N+YA +G+W ++A +R+LMRDRGV+K+PG SWIEV+ ++H F+ D +HP
Sbjct: 626 QHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHP 685
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+++I+NYLE++ +M++ GYVPD KE L HSEKLAVA+G + +G
Sbjct: 686 EVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHG 745
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ V KNLRICGDCHNA KF+S + GREI VRD RFH F+DG+CSCGDYW
Sbjct: 746 ATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 164/326 (50%), Gaps = 32/326 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK---NLVPFSAY-LSNHFILLYSKCGCLSAAHHA 56
TF V+ C GK +HA +LK N P A ++N I Y KCG + A
Sbjct: 291 TFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEI 350
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
FN+ ++ S+N++L+ Y + A+ F+++P+ +++S+ +IS A G E AL
Sbjct: 351 FNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEAL 410
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
F M+ + F+ + +G I + S +L +QLH + G++ S N+L+T Y
Sbjct: 411 KFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMY 470
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+R G +D A +F M + D +SWN+M+ A GQH +G +A++LF+EM+ + D +
Sbjct: 471 ARCGVVDAAHCLFINMPCV-DAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISF 529
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSG----------LIDLYAKCSGD 282
++++A + HA L+K G + + H G +IDL + +G
Sbjct: 530 LTVISACS-----------HAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCR-AGK 577
Query: 283 MRDCMKVFEEIP-QPDLVLWNTMISG 307
+ +V E +P +P +W +++G
Sbjct: 578 FSEAKEVMESMPFEPGAPIWEALLAG 603
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 37/146 (25%)
Query: 345 SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
S +S SL + +HA I + R + N L+ +YSK L AR LFD +P+ + V+
Sbjct: 25 SPISYSLARPVHAHMIASGFQP-RGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVART 83
Query: 405 SMIAGYAQHG-------------IGME--------------------ALRLFEWMLETNI 431
++IA Y+ G +GM A+ LF M N
Sbjct: 84 TLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNF 143
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKY 457
P N TF SVL A A VAE +K+
Sbjct: 144 RPDNYTFTSVLGALA---LVAEKEKH 166
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 273/718 (38%), Positives = 395/718 (55%), Gaps = 45/718 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C R+L GK +H + L + + N F L C +
Sbjct: 150 TFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMK 209
Query: 61 QH---------ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H ++ FS N LL YA+ +A +F +IP+PD+VS+N +I+
Sbjct: 210 VHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEK 269
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNS 169
+ AL L M R FTLS + A + + L +QLH + + + V
Sbjct: 270 NDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVG 329
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ YS+ G L +A+ VF ++ KD + WNS++ Y +EA+ LF M L
Sbjct: 330 LIDMYSKCGLLQDARMVF-DLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ TL++IL + + Q H IKSG+ + ++ + L+D Y KC + D KV
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCC-LLEDAAKV 447
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE P DLV + +MI+ YSQ ++AL + ++ PD F + +AC+NLS
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYG-LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
GKQIH +K + S+ + N+LV MY+KCG+++DA +F+ + VS ++MI
Sbjct: 507 YEQGKQIHVHVLKCGLLSD-VFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIG 565
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G AQHG G +AL+LF ML+ I P +IT VSVLSAC H G V E +++F +M+ +FG
Sbjct: 566 GLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGIT 625
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANH 511
P EHY+CM+D+LGR G+L +A L++ MPF + + AA
Sbjct: 626 PTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEM 685
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L LEP + +++LANIYA++G W+ VA +RR M++ V+K+PG SWIE+K +++ F+
Sbjct: 686 LLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIV 745
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGL 619
D SHP KEI+ L+++ ++ AGYVP +KE+ L HHSEKLAVAFGL
Sbjct: 746 GDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGL 805
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++T G PI V KNLR+C DCH A KFIS +A REI VRD RFH F+DG CSCGDYW
Sbjct: 806 IATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 254/538 (47%), Gaps = 94/538 (17%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++L +D+ +G ++HA + + L N + LYSKC C
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHA---RIIRLGLLGLRNRLVNLYSKCQC------------ 97
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
F V AR+L I S+ +PDLVS++ LIS Y G E AL + +
Sbjct: 98 ------FRV-----ARKLVIDSS--------EPDLVSWSALISGYVQNGRGEEALLTYYE 138
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLA------------------------ 155
M + FT S ++ S NL L KQ+H +A
Sbjct: 139 MYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNAC 198
Query: 156 ----------------IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
I G+D N+LL Y+++G + A VFYE+ + D VSW
Sbjct: 199 AGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPK-PDIVSW 257
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
N+++ H + AL+L +M S ++ M+TL+S L A ++ + G Q H+ L+K
Sbjct: 258 NAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK 317
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+S +G GLID+Y+KC G ++D VF+ +P D+++WN++ISGYS Y +A+
Sbjct: 318 MDMEPDSFVGVGLIDMYSKC-GLLQDARMVFDLMPXKDVIVWNSIISGYSNC-GYDIEAM 375
Query: 320 GCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
F + + G + + ++ S + + +Q+H ++IK + + V N+L+
Sbjct: 376 SLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGY-VANSLLDS 434
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KC LEDA ++F+ P + V+ SMI Y+Q+G+G EAL+++ M + +I P F
Sbjct: 435 YGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIF 494
Query: 439 VSVLSACAHTGKVAEGQKYF------SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
S+ +ACA+ +G++ ++ D+F + ++++ + G + DA
Sbjct: 495 SSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG-------NSLVNMYAKCGSIDDA 545
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/779 (35%), Positives = 403/779 (51%), Gaps = 106/779 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL C + G+ LHAL K Y+ N + LYS+ +A F++
Sbjct: 215 VFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISA----------- 105
Q + SFN L++ A+Q A +LF ++ +PD V+ +L+SA
Sbjct: 275 QSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGE 334
Query: 106 ------------------------YADCGDTESA-------------------------- 115
Y +C D ++A
Sbjct: 335 QLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLD 394
Query: 116 -----LSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNN 168
+F+ M+ K + FT ++ S L L +Q+H I GF V +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
L+ Y+++G LD A + + E D VSW +++ Y QH EAL+ F+EM++ +
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLTE-DDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQ 513
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
D +S ++A ++ L G Q HA SG+ ++ IG+ L+ LYA+C G +++
Sbjct: 514 SDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARC-GRIKEAYL 572
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
FE+I D + WN +ISG++Q Y + AL F ++NR +F +SA +N++
Sbjct: 573 EFEKIDAKDSISWNGLISGFAQ-SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
GKQIHA+ IK S+ I V+NAL+ Y+KCG++EDARR F MPE N VS N+MI
Sbjct: 632 NIKQGKQIHAMIIKRGFDSD-IEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMI 690
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
GY+QHG G EA+ LFE M + P ++TFV VLSAC+H G V +G YF M G
Sbjct: 691 TGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGL 750
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AAN 510
P+ HY+C++DL+ RAG L+ A + IE MP P + + AA
Sbjct: 751 VPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQ 810
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
H L+LEP ++ YV+L+N+YA SGKW+ R++MR+RGV+K+PG SWIEVK +H F
Sbjct: 811 HLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFY 870
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
D HP+ +I+ +L E+++K + GY D K+ + HSEKLA+ FG
Sbjct: 871 VGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFG 930
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LLS S PI VMKNLR+C DCH+ IKF+S I+ R I VRD YRFH F+ G CSC DYW
Sbjct: 931 LLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/609 (26%), Positives = 283/609 (46%), Gaps = 57/609 (9%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I SAR++FD + D VS+ +IS ++ G E A+ LF +M
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210
Query: 129 TDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ S +++ + + +QLH L G V N+L+T YSR A++V
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKV 270
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M + KDEVS+NS++ Q AL+LF +M L D T+AS+L+A S
Sbjct: 271 FSKM-QSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGA 329
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H+++IK+G + + L+DLY CS D++ ++F ++VLWN M+
Sbjct: 330 LCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCS-DIKTAHEMFLTAQTENVVLWNVMLV 388
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
+ + + S ++ F+++ G P+ ++ ++ C+++ LG+QIH IK +
Sbjct: 389 AFGKLDNLS-ESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQ 447
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + V + L+ MY+K G L+ A + + E + VS ++I+GYAQH + EAL+ F+
Sbjct: 448 FN-VYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKE 506
Query: 426 MLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
ML I NI F S +SACA + G+ Q Y S G+ + + ++ L
Sbjct: 507 MLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS------GYSEDLSIGNALVSL 560
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
R G++ +A F +++ +++ + L + +A SG E+
Sbjct: 561 YARCGRIKEAYL------------------EFEKIDAKDSISWNGLISGFAQSGYCEDAL 602
Query: 541 TIRRLMR-----------DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
+ M V + I+ KQ+H + + G I E+ N L
Sbjct: 603 KVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDI-EVSNALITF 661
Query: 590 SRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNA 643
K G + D + EK V++ + T Y E + + + ++ G+ N
Sbjct: 662 YAK---CGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNH 718
Query: 644 IKFISAIAG 652
+ F+ ++
Sbjct: 719 VTFVGVLSA 727
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+S +L K+LH + GF + + + N L+ Y G LD +VF +M + SW+
Sbjct: 22 NSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPN-RSVRSWD 80
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE-DLVGGLQFHAHLIK 259
++ + + + L LF M+ + + AS+L A + + Q HA +I
Sbjct: 81 KIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIIC 140
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
G + I + LI LYAK +G + KVF+ + D V W MISG+SQ Y ++A+
Sbjct: 141 HGLLCSPIISNPLIGLYAK-NGLIISARKVFDNLCTKDSVSWVAMISGFSQNG-YEEEAI 198
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F +++ G P F V+S C+ + +G+Q+HAL K S V NALV +
Sbjct: 199 HLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG-SSLETYVCNALVTL 257
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
YS+ N A ++F +M + VS NS+I+G AQ G AL LF M + P +T
Sbjct: 258 YSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTV 317
Query: 439 VSVLSACAHTGKVAEGQKYFS 459
S+LSACA G + +G++ S
Sbjct: 318 ASLLSACASNGALCKGEQLHS 338
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 273/711 (38%), Positives = 394/711 (55%), Gaps = 79/711 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C G ++ G+ +H L LK + + +N + +YSK G
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAG---------------- 232
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA--DCGDTESALSLFKDM 122
I A +F I PD+VS+N +I+ DC D AL L +M
Sbjct: 233 ---------------EIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL--ALMLLDEM 275
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHC--LAIYCGFDHYASVNNSLLTCYSRNG 178
+ + FTLS + A + L +QLH + + D +A+V L+ YS+
Sbjct: 276 KGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG--LVDMYSKCE 333
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+R + M + KD ++WN+++ Y Q + L+A+ LF +M S + + TL+++L
Sbjct: 334 MMDDARRAYDSMPK-KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVL 392
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ SL+ + Q H IKSG + + ++ + L+D Y KC+ + + K+FEE DL
Sbjct: 393 KSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCN-HIDEASKIFEERTWEDL 451
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC--VISACSNLSP-SLGKQI 355
V + +MI+ YSQ + ++AL + ++ PD F+C +++AC+NLS GKQ+
Sbjct: 452 VAYTSMITAYSQYGD-GEEALKLYLQMQDADIKPD--PFICSSLLNACANLSAYEQGKQL 508
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H IK + I +N+LV MY+KCG++EDA R F +P VS ++MI GYAQHG
Sbjct: 509 HVHAIKFGFMCD-IFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGH 567
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EALRLF ML +PP +IT VSVL AC H G V EG++YF M+ MFG +P EHY+
Sbjct: 568 GKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYA 627
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPS 518
CMIDLLGR+GKL +A L+ ++PF + KAA LEP
Sbjct: 628 CMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPE 687
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ +V+LANIYA++G WE VA +R+ M+D V+K+PG SWIE+K +++ F+ D SH
Sbjct: 688 KSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSR 747
Query: 579 IKEIHNYLEEMSRKMKQAGYV------------PDKEKRLVHHSEKLAVAFGLLSTSYGE 626
EI+ L+++ + +AGY +KEK L HHSEKLAVAFGL++T G
Sbjct: 748 SDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGG 807
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI V KNLRIC DCH KF+ I REI VRD RFH FKDG CSCGDYW
Sbjct: 808 PIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 251/511 (49%), Gaps = 40/511 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C +RDL G+ +H + + +++N +++Y+KCG L
Sbjct: 84 TFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLD--------- 134
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+R+LF I + ++VS+N L S Y A+ LFK
Sbjct: 135 ----------------------DSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFK 172
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + F++S ++ A + L +++H L + G D N+L+ YS+ G
Sbjct: 173 EMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAG 232
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A VF ++ D VSWN+++ H AL L EM +M+TL+S L
Sbjct: 233 EIEGAVAVFQDIAH-PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSAL 291
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A ++ G Q H+ LIK H + GL+D+Y+KC M D + ++ +P+ D+
Sbjct: 292 KACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEM-MDDARRAYDSMPKKDI 350
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN +ISGYSQ ++ D A+ F K+ + + V+ + ++L + KQIH
Sbjct: 351 IAWNALISGYSQCGDHLD-AVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHT 409
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++IK I S+ V N+L+ Y KC ++++A ++F+ + V+ SMI Y+Q+G G
Sbjct: 410 ISIKSGIYSD-FYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGE 468
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+L+ M + +I P S+L+ACA+ +G K + FGF + + +
Sbjct: 469 EALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQG-KQLHVHAIKFGFMCDIFASNSL 527
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+++ + G + DA+R +P N G ++ A
Sbjct: 528 VNMYAKCGSIEDADRAFSEIP-NRGIVSWSA 557
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 258/514 (50%), Gaps = 37/514 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y++ R AR+L D+ + D+VS+++L+S Y G E AL +F +M
Sbjct: 20 NHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVK 79
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ FT ++ A S +L + +++H +A+ GF+ V N+L+ Y++ G LD+++R+
Sbjct: 80 CNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRL 139
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F + E ++ VSWN++ Y Q EA+ LF+EMV + + ++++ IL A L++
Sbjct: 140 FGGIVE-RNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQE 198
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G + H ++K G + + L+D+Y+K +G++ + VF++I PD+V WN +I+
Sbjct: 199 GDLGRKIHGLMLKMGLDLDQFSANALVDMYSK-AGEIEGAVAVFQDIAHPDVVSWNAIIA 257
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIR 365
G + +D AL ++ G P+ + + AC+ + LG+Q+H+ IK++
Sbjct: 258 G-CVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAH 316
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + LV MYSKC ++DARR +D MP+ + ++ N++I+GY+Q G ++A+ LF
Sbjct: 317 SDLFAA-VGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSK 375
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M +I T +VL + A + ++ ++ G + + ++D G+
Sbjct: 376 MFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKS-GIYSDFYVINSLLDTYGKCN 434
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ +A ++ E + + V Y + Y+ G EE +
Sbjct: 435 HIDEASKIFEERTWE------------------DLVAYTSMITAYSQYGDGEEALKLYLQ 476
Query: 546 MRDRGVQKKP-----------GFSWIEVKKQMHV 568
M+D ++ P S E KQ+HV
Sbjct: 477 MQDADIKPDPFICSSLLNACANLSAYEQGKQLHV 510
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 184/352 (52%), Gaps = 10/352 (2%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+LH I GF S+ N L+T YS+ A+++ E E+ D VSW+S++ Y Q+
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSEL-DVVSWSSLLSGYVQN 60
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
EAL +F EM L + + +T S+L A + DL G + H + +GF + +
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ L+ +YAKC G + D ++F I + ++V WN + S Y Q E +A+G FK++ R G
Sbjct: 121 NTLVVMYAKC-GLLDDSRRLFGGIVERNVVSWNALFSCYVQ-SELCGEAVGLFKEMVRSG 178
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P++ S +++AC+ L LG++IH L +K+ + ++ S NALV MYSK G +E A
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSA-NALVDMYSKAGEIEGA 237
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+F + + VS N++IAG H AL L + M + P T S L ACA
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAM 297
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSC--MIDLLGRAGKLTDAERLIEAMP 498
G G++ S + M + + ++ ++D+ + + DA R ++MP
Sbjct: 298 GFKELGRQLHSSLIKM---DAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP 346
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 203/419 (48%), Gaps = 42/419 (10%)
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEIPQPDLVLWNTMISGY 308
++ HAHLIK GF ++ + + L+ LY+KC G R K+ +E + D+V W++++SGY
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYAR---KLVDESSELDVVSWSSLLSGY 57
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSN 367
Q + ++AL F ++ +G ++ +F V+ ACS ++G+++H + + S+
Sbjct: 58 VQNG-FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESD 116
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
V N LV MY+KCG L+D+RRLF + E N VS N++ + Y Q + EA+ LF+ M+
Sbjct: 117 GF-VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMV 175
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ I P + +L+ACA + G+K +M M G + + + ++D+ +AG++
Sbjct: 176 RSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKM-GLDLDQFSANALVDMYSKAGEI 234
Query: 488 TDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
A + + + +P ++ A L N + +ML + SG + T+ ++
Sbjct: 235 EGAVAVFQDIA-HPDVVSWNAIIAGCVLHDCNDLA-LMLLDEMKGSGTRPNMFTLSSALK 292
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHP------MIKEIHNYLEEMSRKMKQAGYVPD 601
GF E+ +Q+H + + +H + ++++ E M + +P
Sbjct: 293 ACAAM---GFK--ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK 347
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
K+ +A+ L + Y + CGD +A+ S + +I T
Sbjct: 348 KD----------IIAWNALISGYSQ----------CGDHLDAVSLFSKMFSEDIDFNQT 386
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 273/712 (38%), Positives = 386/712 (54%), Gaps = 73/712 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G RDL G+ +H ++ Y K
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTG--------------YEK--------------- 238
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VF+ N L+ Y++ I A +F+++P D+VS+N IS G AL L
Sbjct: 239 --DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQ 296
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAI--YCGFDHYASVNNSLLTCYSRN 177
M+ + FTLS ++ A + L +Q+H + FD + +V L+ Y+++
Sbjct: 297 MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG--LVDMYAKH 354
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM--YTLA 235
GFLD+A++VF M +D + WN+++ E L LF M L LD+ TLA
Sbjct: 355 GFLDDARKVFDFMPR-RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLA 413
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L + S E + Q HA K G +SH+ +GLID Y KC G + +KVF+E
Sbjct: 414 SVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC-GQLDYAIKVFKESRS 472
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D++ TM++ SQ + + + A+ F ++ R G PD +++AC++LS GKQ
Sbjct: 473 DDIISSTTMMTALSQCD-HGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQ 531
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA IK + S+ + NALV Y+KCG++EDA F +PE VS ++MI G AQHG
Sbjct: 532 VHAHLIKRQFTSD-VFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHG 590
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G AL LF ML+ + P +IT SVLSAC H G V + +KYF MK+ FG + EHY
Sbjct: 591 HGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHY 650
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
+CMID+LGRAGKL DA L+ MPF + + AA LEP
Sbjct: 651 ACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEP 710
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ +V+LAN YA++G W+E+A +R+LM+D V+K+P SW+E+K ++H F+ D SHP
Sbjct: 711 EKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHP 770
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
M ++I+ L E+ M +AGYVP +KE L HHSE+LAVAF L+ST G
Sbjct: 771 MTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSG 830
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI V KNLRIC DCH A K+IS I REI +RD RFH F +G CSCGDYW
Sbjct: 831 APIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 241/489 (49%), Gaps = 44/489 (8%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
R L G LH+ LK+ A SNH + LYS+C SAA
Sbjct: 18 RSLFAGAHLHSHLLKS--GLLAGFSNHLLTLYSRCRLPSAA------------------- 56
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
R +FD+IP P VS+++L++AY++ G AL F+ MR + + F
Sbjct: 57 ------------RAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEF 104
Query: 133 TLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE--- 189
L ++ + ++ Q+H LA+ H V N+L+ Y G +DEA+R+F E
Sbjct: 105 ALP-VVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVG 163
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
+G ++ VSWN+M+ AY ++ + +A+ +F+EMV + + + ++ A T DL
Sbjct: 164 VGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEA 223
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G Q H ++++G+ ++ + L+D+Y+K GD+ VFE++P D+V WN ISG
Sbjct: 224 GRQVHGAVVRTGYEKDVFTANALVDMYSKL-GDIEMAATVFEKMPAADVVSWNAFISG-C 281
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
+ +AL ++ G P+ + V+ AC+ +LG+QIH +K +
Sbjct: 282 VTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDE 341
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
V LV MY+K G L+DAR++FD MP + + N++I+G + G E L LF M +
Sbjct: 342 F-VAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRK 400
Query: 429 T--NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
++ T SVL + A + + ++ ++ + + G + + +ID + G+
Sbjct: 401 EGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKI-GLLSDSHVINGLIDSYWKCGQ 459
Query: 487 LTDAERLIE 495
L A ++ +
Sbjct: 460 LDYAIKVFK 468
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 215/468 (45%), Gaps = 39/468 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G G+ +H +K + F +++ + +Y+K G L
Sbjct: 308 TLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD--------- 358
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR++FD +P+ DL+ +N LIS + G LSLF
Sbjct: 359 ----------------------DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFH 396
Query: 121 DMREKRFDTD--GFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
MR++ D D TL+ ++ TASS +C +Q+H LA G + V N L+ Y +
Sbjct: 397 RMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWK 456
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G LD A +VF E D +S +M+ A Q G +A++LF +M+ L D + L+S
Sbjct: 457 CGQLDYAIKVFKE-SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSS 515
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A TSL G Q HAHLIK F + G+ L+ YAKC G + D F +P+
Sbjct: 516 LLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKC-GSIEDADMAFSGLPER 574
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+V W+ MI G +Q + +AL F ++ G P+ + V+SAC++ + +
Sbjct: 575 GIVSWSAMIGGLAQ-HGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKY 633
Query: 357 ALTIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
++K +R + A ++ + + G LEDA L + MP ++ + G ++
Sbjct: 634 FESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHR 693
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
E R+ L T P + T V + + A G E K +MKD
Sbjct: 694 DPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKD 741
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 145/309 (46%), Gaps = 25/309 (8%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T+ S L F + L G H+HL+KSG + L+ LY++C VF+E
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLP-SAARAVFDE 62
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
IP P V W+++++ YS D AL F+ + G ++ + V+ ++ G
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRD-ALLAFRAMRGRGVPCNEFALPVVLKCAPDV--RFG 119
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM----PEHNTVSLNSMIA 408
Q+HAL + + + + V NALVA+Y G +++ARR+FD E N VS N+MI+
Sbjct: 120 AQVHALAVATRLVHD-VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Y ++ +A+ +F M+ + P F V++AC + + G++ + G+E
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT-GYE 237
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP---------FNPGSIA----LKAANHFLQL 515
+ + ++D+ + G + A + E MP F G + +A LQ+
Sbjct: 238 KDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQM 297
Query: 516 EPSNAVPYV 524
+ S VP V
Sbjct: 298 KSSGLVPNV 306
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/649 (40%), Positives = 376/649 (57%), Gaps = 39/649 (6%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H+NV N LL AY + +A+AR++F ++P D V+YN ++ + G AL LF
Sbjct: 172 HSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAA 231
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR K FT S ++T ++ +LCL +Q+H L + VNNSLL YS+
Sbjct: 232 MRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSN-VFVNNSLLDFYSKCDC 290
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LDE K++F+EM E +D VS+N M+ Y +R L+LF+EM SL AS+L+
Sbjct: 291 LDEMKKLFHEMIE-RDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLS 349
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV-FEEIPQPDL 298
S+ + G Q HA L+ G +G+ LID+Y+KC M D K F
Sbjct: 350 VAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCG--MLDAAKTNFINKNDKTG 407
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W MI+G Q + ++AL F + R G PD +F I A SNL+ LG+Q+H+
Sbjct: 408 VSWTAMITGCVQNGQ-QEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHS 466
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I+ S+ S +AL+ MY+KCG L++A + FD MPE N++S N++I+ YA +G
Sbjct: 467 YLIRSGHMSSVFS-GSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAK 525
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+++FE ML P ++TF+SVLSAC+H G E KYF +M+ +G P EHYSC+
Sbjct: 526 NAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCV 585
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNA 520
ID LGR G+ + ++ MPF I A AA + ++A
Sbjct: 586 IDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDA 645
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
PYV+L+NI+A +GKWE+ A ++++MRDRG++K+ G+SW+EVK +++ F + D ++PMI
Sbjct: 646 TPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMIT 705
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI + LE + ++M + GY PD K + L +HSE+LA+AF L++T G PI
Sbjct: 706 EIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPI 765
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
VMKNL C DCH+AIK +S I R+I VRD+ RFH FKDG CSCGDYW
Sbjct: 766 RVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 232/499 (46%), Gaps = 54/499 (10%)
Query: 15 LVTGKSLHALYLKNLVPF--SAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
+ +G+ A L + +P +A+ N + YS+ G LSAAHH F
Sbjct: 45 ISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLF--------------- 89
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC--GDTESALSLFKDMREKRFDTD 130
++S L D V++ +I A+A A+SLF+DM + D
Sbjct: 90 --------LSSPPHLRDA------VTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPD 135
Query: 131 GFTLSGLI-----TASSNNLCLIKQLHCLAIYCGFDHY-ASVNNSLLTCYSRNGFLDEAK 184
T++ ++ + + +I LH A+ G H V N+LL Y ++G L A+
Sbjct: 136 RVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAAR 195
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
RVF EM +D V++N+M++ + EAL LF M L +T +++LT T +
Sbjct: 196 RVFQEMPH-RDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGV 254
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM----KVFEEIPQPDLVL 300
DL G Q H L+ N + + L+D Y+KC DC+ K+F E+ + D V
Sbjct: 255 GDLCLGRQVHG-LVARATSSNVFVNNSLLDFYSKC-----DCLDEMKKLFHEMIERDNVS 308
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+N MI+GY+ S L F+++ + + + ++S ++ +GKQIHA
Sbjct: 309 YNVMIAGYAWNRCAS-IVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQL 367
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ + + S + V NAL+ MYSKCG L+ A+ F + VS +MI G Q+G EA
Sbjct: 368 VLLGLSSEDL-VGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEA 426
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L+LF M + P TF S + A ++ + G++ S + G S ++D
Sbjct: 427 LQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRS-GHMSSVFSGSALLD 485
Query: 480 LLGRAGKLTDAERLIEAMP 498
+ + G L +A + + MP
Sbjct: 486 MYTKCGCLDEALQTFDEMP 504
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 37/348 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL G DL G+ +H L + + +++N + YSKC CL
Sbjct: 243 TFSTVLTVATGVGDLCLGRQVHGL-VARATSSNVFVNNSLLDFYSKCDCLD--------- 292
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++LF ++ + D VSYN +I+ YA L LF+
Sbjct: 293 ----------------------EMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFR 330
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ FD + L++ + + ++ + KQ+H + G V N+L+ YS+ G
Sbjct: 331 EMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCG 390
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD AK F + K VSW +M+ Q+ + EALQLF M L D T +S +
Sbjct: 391 MLDAAKTNFINKND-KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTI 449
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A ++L + G Q H++LI+SG + GS L+D+Y KC G + + ++ F+E+P+ +
Sbjct: 450 KASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKC-GCLDEALQTFDEMPERNS 508
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ WN +IS Y+ + + A+ F+ + G+ PD +F+ V+SACS+
Sbjct: 509 ISWNAVISAYAHYGQ-AKNAIKMFEGMLCYGFKPDSVTFLSVLSACSH 555
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K + G+ LH+ +++ S + + + +Y+KCGCL A F++
Sbjct: 444 TFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEM 503
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N S+N +++AYA + +A ++F+ + +PD V++ +++SA + G E +
Sbjct: 504 PERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECM 563
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + I +HY+ V ++L R
Sbjct: 564 KYFELMEYE----------------------------YGISPWKEHYSCVIDTL----GR 591
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
G D+ + + EM D + W+S++
Sbjct: 592 VGRFDKVQEMLGEMPFEDDPIIWSSIL 618
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N L+ G L AR LFD+MP +N SLN M++GY++ G A LF +
Sbjct: 38 NLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLF-----LSS 92
Query: 432 PP---TNITFVSVLSACAHTGKVAEGQKYFSMMKDMF--GFEPEGEHYSCMIDLLGRAGK 486
PP +T+ ++ A A + A S+ +DM G P+ + +++L +G
Sbjct: 93 PPHLRDAVTWTVMIGAFA-SAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGG 151
Query: 487 LTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
A + PF ALK L L SN V L + Y G +A RR+
Sbjct: 152 TAAAIIIASLHPF-----ALK-----LGLLHSNVVVCNTLLDAYCKHGL---LAAARRVF 198
Query: 547 RD 548
++
Sbjct: 199 QE 200
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/746 (35%), Positives = 402/746 (53%), Gaps = 105/746 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C L + +H + + + ++ I +YSKCG +S A F +
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++ A A+ ++ A +L++++ Q P+ V++ +L+++ C +T AL
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS---C-NTPEAL 296
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ R +R +H G + V N+L+T Y +
Sbjct: 297 N-----RGRR------------------------IHSHISERGLETDVVVANALITMYCK 327
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ----HREGL-EALQLFQEMVSLQLGLDM 231
+ +A+ F M + +D +SW++M+ Y Q +E L E QL + M + +
Sbjct: 328 CNCIQDARETFDRMSK-RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNK 386
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----------- 280
T SIL A + L G Q HA + K GF + + + + ++YAKC
Sbjct: 387 VTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446
Query: 281 -------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
GD+ KVF E+ ++V WN MI+GY+Q + + +
Sbjct: 447 MENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIA-KVFEL 505
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ G+ PD + + ++ AC LS GK +HA +K+ + S+ + V +L+ MYS
Sbjct: 506 LSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTV-VATSLIGMYS 564
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG + +AR +FD++ +TV+ N+M+AGY QHGIG EA+ LF+ ML+ +PP ITF +
Sbjct: 565 KCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTA 624
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
V+SAC G V EG++ F +M++ F +P +HY CM+DLLGRAG+L +AE I+ MP
Sbjct: 625 VISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCE 684
Query: 501 PG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P +A AA+H L+LEPSNA YV L+NIYA +G+W++ +R
Sbjct: 685 PDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVR 744
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-- 601
++M D+G++K G S IE+ ++H FVAED +HP I IH LE ++++MK+AGY PD
Sbjct: 745 KVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMR 804
Query: 602 ----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
KE+ L HHSEKLA+A+GLL T G PI +MKNLR+CGDCH A KFIS I
Sbjct: 805 FVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIR 864
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI RD RFH FK+G CSCGD+W
Sbjct: 865 KREIVARDANRFHYFKNGTCSCGDFW 890
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/547 (24%), Positives = 259/547 (47%), Gaps = 58/547 (10%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+++ N L+ Y++ +AS Q+F ++ D+V+++++I+AYA A F+ M+
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + T ++ A +N L K ++H + G + +V +L+T YS+ G +
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A +F +M E ++ VSW +++ A QHR+ EA +L+++M+ + + T S+L +
Sbjct: 232 LACEIFQKMKE-RNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSC 290
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ E L G + H+H+ + G + + + LI +Y KC+ ++D + F+ + + D++ W
Sbjct: 291 NTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC-IQDARETFDRMSKRDVISW 349
Query: 302 NTMISGYSQK----EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIH 356
+ MI+GY+Q +E D+ +++ R G P+ +F+ ++ ACS + + G+QIH
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIH 409
Query: 357 ALTIKIEIRSNR------------------------------ISVNNALVAMYSKCGNLE 386
A K+ S+R + +L+ MY KCG+L
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLT 469
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A ++F M N VS N MIAGYAQ G + L M P +T +S+L AC
Sbjct: 470 SAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACG 529
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP-------- 498
+ G K G E + + +I + + G++T+A + + +
Sbjct: 530 ALSALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWN 588
Query: 499 -----FNPGSIALKAANHFLQL----EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+ I +A + F ++ P N + + + + +G +E I R+M++
Sbjct: 589 AMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE- 647
Query: 550 GVQKKPG 556
+ KPG
Sbjct: 648 DFRMKPG 654
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNL-----SPSLGKQIHALTIKIEIRSNRISV 371
Q LG K+ G + ++ C+I C+ L + KQ+ L + I+I +
Sbjct: 64 QLLGIIKQR---GLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDI-----YL 115
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N+L+ YSK G++ ++F RM + V+ +SMIA YA + +A FE M + NI
Sbjct: 116 GNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P ITF+S+L AC + + + ++ +++K G E + + +I + + G+++ A
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVK-ASGMETDVAVATALITMYSKCGEISLAC 234
Query: 492 RLIEAM 497
+ + M
Sbjct: 235 EIFQKM 240
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/737 (35%), Positives = 400/737 (54%), Gaps = 68/737 (9%)
Query: 6 LKTCVG---RRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+K C+G R K +H ++ L +L N+ + Y+ + A F++
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+FS+N LL AY++ I+ F+++P D V++N LI Y+ G +A+ + M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 123 -REKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
R+ + TL ++ SS+N + L KQ+H I GF+ Y V + LL Y+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 180 LDEAKRVFYEM-----------------------------GEIKDEVSWNSMVVAYGQHR 210
+ +AK+VFY + G KD VSW +M+ Q+
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EA++ F+EM L +D Y S+L A L + G Q HA +I++ F + ++GS
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
LID+Y KC + VF+ + Q ++V W M+ GY Q +++A+ F + R G
Sbjct: 310 ALIDMYCKCKC-LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR-AEEAVKIFLDMQRSGI 367
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PD + ISAC+N+S G Q H I + + ++V+N+LV +Y KCG+++D+
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDST 426
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
RLF+ M + VS +M++ YAQ G +E ++LF+ M++ + P +T V+SAC+ G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-- 507
V +GQ+YF +M +G P HYSCMIDL R+G+L +A R I MPF P +I
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 508 ---------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA ++L+P + Y +L++IYA+ GKW+ VA +RR MR++ V+
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K+PG SWI+ K ++H F A+D S P + +I+ LEE++ K+ GY PD
Sbjct: 607 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEA 666
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
K K L +HSE+LA+AFGL+ G+PI V KNLR+C DCHNA K IS++ GREI VRD
Sbjct: 667 VKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDA 726
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FKDG CSCGD+W
Sbjct: 727 VRFHRFKDGTCSCGDFW 743
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 149/315 (47%), Gaps = 39/315 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C G + GK +HA ++ Y+ + I +Y KC CL A F++ +
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV S+ ++ Y + G E A+ +F D
Sbjct: 333 QKNVVSWTAMVVGYGQ-------------------------------TGRAEEAVKIFLD 361
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D D +TL I+A +N L + Q H AI G HY +V+NSL+T Y + G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D++ R+F EM ++D VSW +MV AY Q +E +QLF +MV L D TL +++
Sbjct: 422 IDDSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A S LV Q + L+ S + IG S +IDL+++ SG + + M+ +P P
Sbjct: 481 A-CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR-SGRLEEAMRFINGMPFPP 538
Query: 297 DLVLWNTMISGYSQK 311
D + W T++S K
Sbjct: 539 DAIGWTTLLSACRNK 553
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 133/349 (38%), Gaps = 73/349 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T Q + C L G H + + + +SN + LY KCG + + FN+
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ S+ +++AYA+ R QLFD++ Q PD V+ +ISA + G E
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M + G++ + + C+I +SR
Sbjct: 493 RYFKLMTSEY---------GIVPSIGHYSCMID-----------------------LFSR 520
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G L+EA R M D + W +++ A +++ LE + E + + LD + A
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSAC-RNKGNLEIGKWAAESL---IELDPHHPA- 575
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+T L + + G D A+ MR+ K ++ P
Sbjct: 576 ---GYTLLSSI-------------------YASKGKWDSVAQLRRGMRE--KNVKKEPGQ 611
Query: 297 DLVLWNTMISGYSQKEE---YSDQALGCFKKLNRV----GYHPDDCSFV 338
+ W + +S +E Y DQ ++LN GY P D SFV
Sbjct: 612 SWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKP-DTSFV 659
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/711 (36%), Positives = 395/711 (55%), Gaps = 71/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
FR +L+ C R L G+ +HA LK+ + + YL N + +Y+KCG L+
Sbjct: 98 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLT--------- 148
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR++FD I ++VS+ +I A+ A ++
Sbjct: 149 ----------------------DARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYE 186
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ D T L+ A +N L + +++H G + V SL+ Y++ G
Sbjct: 187 TMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCG 246
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ +F ++ E K+ V+W ++ Y Q + AL+L ++M ++ + T SIL
Sbjct: 247 DISKAQVIFDKLPE-KNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSIL 305
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
T+ L G + H ++I+SG+ + + + LI +Y KC G +++ K+F ++P D+
Sbjct: 306 QGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGG-LKEARKLFGDLPHRDV 364
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL---GKQI 355
V W M++GY+Q + D+A+ F+++ + G PD +F +++CS SP+ GK I
Sbjct: 365 VTWTAMVTGYAQLG-FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCS--SPAFLQEGKSI 421
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H + S + + +ALV+MY+KCG+++DAR +F++M E N V+ +MI G AQHG
Sbjct: 422 HQQLVHAGY-SLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGR 480
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EAL FE M + I P +TF SVLSAC H G V EG+K+F M +G +P EHYS
Sbjct: 481 CREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYS 540
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS 518
C +DLLGRAG L +AE +I MPF PG +AA + L+L+P
Sbjct: 541 CFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPD 600
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ YV L+NIYAA+G++E+ +R++M R V K+PG SWIEV ++HVF ED SHP
Sbjct: 601 DDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPE 660
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
KEI+ L +++ ++K+ GYVPD K + L HSE+LA+ +GL+ T G
Sbjct: 661 AKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGT 720
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI ++KNLR+CGDCH A KFIS + GREI RD +RFH F DG CSCGD+W
Sbjct: 721 PIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 167/346 (48%), Gaps = 35/346 (10%)
Query: 214 EALQLFQEMVSLQLGLDMYT--LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EAL + M+ LQ G +Y+ +L L L G + HA ++KSG N ++ +
Sbjct: 79 EALGILNTMI-LQ-GTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+ +YAKC G + D +VF+ I ++V W MI + + + +A C++ + G
Sbjct: 137 LLSMYAKC-GSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQ-NLEAYKCYETMKLAGCK 194
Query: 332 PDDCSFVCVISACSNLSPSL---GKQIHALTIK--IEIRSNRISVNNALVAMYSKCGNLE 386
PD +FV +++A +N P L G+++H K +E+ V +LV MY+KCG++
Sbjct: 195 PDKVTFVSLLNAFTN--PELLQVGQKVHMEIAKAGLELEPR---VGTSLVGMYAKCGDIS 249
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A+ +FD++PE N V+ +IAGYAQ G AL L E M + + P IT+ S+L C
Sbjct: 250 KAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
+ G+K + G+ E + +I + + G L +A +L +P
Sbjct: 310 TPLALEHGKKVHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLFGDLPHR------ 362
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ V + + YA G +E + R M+ +G++
Sbjct: 363 ------------DVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/708 (37%), Positives = 397/708 (56%), Gaps = 108/708 (15%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
++L+ ++ LS Y K G LSAA FNQ +V S+N +L+ +A+ + AR+
Sbjct: 120 RDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD----------------MREKRFDT- 129
+FDQ+ + +S+N L+SAY G E A LF +R+KR D
Sbjct: 175 IFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 130 ----------DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D + + +IT + N L + D +A ++++ + +NG
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWT--AMVSGFVQNGM 292
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LDEA R+F EM E K+EVSWN+M+ Y Q ++ +A +LF +M S
Sbjct: 293 LDEATRIFEEMPE-KNEVSWNAMIAGYVQSQQIEKARELFDQMPS--------------- 336
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+N+ + ++ YA+C G++ +F+E+PQ D +
Sbjct: 337 ------------------------RNTSSWNTMVTGYAQC-GNIDQAKILFDEMPQRDCI 371
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W MISGY+Q + S++AL F K+ R G + + C +S+C+ ++ LGKQ+H
Sbjct: 372 SWAAMISGYAQSGQ-SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K ++ I+ NAL+AMY KCG++E+A +F+ + E + VS N+MIAGYA+HG G E
Sbjct: 431 LVKAGFQTGYIA-GNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LFE M T I P ++T V VLSAC+HTG V +G +YF+ M +G +HY+CMI
Sbjct: 490 ALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMI 548
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAG+L +A L+++MPF P + + KAA ++EP N+
Sbjct: 549 DLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSG 608
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+N+YAASG+W EV +R MRD+GV+K PG+SW+E++ + H+F D SHP +
Sbjct: 609 MYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAER 668
Query: 582 IHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ YLEE+ ++K+ G+V +KE L +HSEKLAVAFG+LS G PI
Sbjct: 669 IYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIR 728
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCHNAIK IS I R+I VRD+ RFH F +G CSCGDYW
Sbjct: 729 VIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 203/437 (46%), Gaps = 59/437 (13%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS--------- 141
I D+V +N ISAY G ESALS+F MR + T +SG ++ +
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 142 ---------SNNLCL---IKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAKR 185
S N+ L +K + A F+ + N++L+ +++NGF++EA++
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ-----EMVSLQLGLDMYTLASILTA 240
+F +M +K+E+SWN ++ AY Q+ +A +LF E+VS + Y L
Sbjct: 175 IFDQM-LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDD 233
Query: 241 FTSLEDLVGGL-QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
SL D + + +++ +G+ QN G + + ++FEE+P D+
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQN---------------GLLSEARRLFEELPIRDVF 278
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH-AL 358
W M+SG+ Q D+A F+++ ++ S+ +I+ +QI A
Sbjct: 279 AWTAMVSGFVQNGML-DEATRIFEEMP----EKNEVSWNAMIAGYVQ-----SQQIEKAR 328
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ ++ S S N +V Y++CGN++ A+ LFD MP+ + +S +MI+GYAQ G E
Sbjct: 329 ELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEE 388
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M LS+CA + G++ + GF+ + ++
Sbjct: 389 ALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALL 447
Query: 479 DLLGRAGKLTDAERLIE 495
+ G+ G + +A + E
Sbjct: 448 AMYGKCGSIEEAFDVFE 464
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSL 351
I D+V WN IS Y +K + + AL F + R ++ +IS SN
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQ-CESALSVFNGMRR----RSTVTYNAMISGYLSNNKFDC 109
Query: 352 GKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+++ E +R ++ N +++ Y K GNL AR LF++MPE + VS N+M++G+
Sbjct: 110 ARKV------FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQ+G EA ++F+ ML N I++ +LSA G++ + ++ F D E
Sbjct: 164 AQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARRLFDSKMDW-----E 214
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
++C++ R +L DA L + MP
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 90/241 (37%), Gaps = 40/241 (16%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L +C L GK LH +K N + +Y KCG + A F ++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIP---QPDLVSYNTLISAYADCGDTESALSLFKDM 122
S+N ++A YAR A LF+ + +PD V+ ++SA + G + + F M
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSM 531
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ G+ + + C+I L R G LDE
Sbjct: 532 ---------YQNYGITANAKHYTCMIDLL-----------------------GRAGRLDE 559
Query: 183 AKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
A + M D +W +++ A +G G +A + EM G MY L S L
Sbjct: 560 ALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSG--MYVLLSNLY 617
Query: 240 A 240
A
Sbjct: 618 A 618
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/708 (37%), Positives = 397/708 (56%), Gaps = 108/708 (15%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
++L+ ++ LS Y K G LSAA FNQ +V S+N +L+ +A+ + AR+
Sbjct: 120 RDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD----------------MREKRFDT- 129
+FDQ+ + +S+N L+SAY G E A LF +R+KR D
Sbjct: 175 IFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 130 ----------DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D + + +IT + N L + D +A ++++ + +NG
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWT--AMVSGFVQNGM 292
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LDEA R+F EM E K+EVSWN+M+ Y Q ++ +A +LF +M S
Sbjct: 293 LDEATRIFEEMPE-KNEVSWNAMIAGYVQSQQIEKARELFDQMPS--------------- 336
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+N+ + ++ YA+C G++ +F+E+PQ D +
Sbjct: 337 ------------------------RNTSSWNTMVTGYAQC-GNIDQAKILFDEMPQRDCI 371
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W MISGY+Q + S++AL F K+ R G + + C +S+C+ ++ LGKQ+H
Sbjct: 372 SWAAMISGYAQSGQ-SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K ++ I+ NAL+AMY KCG++E+A +F+ + E + VS N+MIAGYA+HG G E
Sbjct: 431 LVKAGFQTGYIA-GNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LFE M T I P ++T V VLSAC+HTG V +G +YF+ M +G +HY+CMI
Sbjct: 490 ALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMI 548
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAG+L +A L+++MPF P + + KAA ++EP N+
Sbjct: 549 DLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSG 608
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+N+YAASG+W EV +R MRD+GV+K PG+SW+E++ + H+F D SHP +
Sbjct: 609 MYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAER 668
Query: 582 IHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ YLEE+ ++K+ G+V +KE L +HSEKLAVAFG+LS G PI
Sbjct: 669 IYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIR 728
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCHNAIK IS I R+I VRD+ RFH F +G CSCGDYW
Sbjct: 729 VIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 203/437 (46%), Gaps = 59/437 (13%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS--------- 141
I D+V +N ISAY G ESALS+F MR + T +SG ++ +
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 142 ---------SNNLCL---IKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAKR 185
S N+ L +K + A F+ + N++L+ +++NGF++EA++
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ-----EMVSLQLGLDMYTLASILTA 240
+F +M +K+E+SWN ++ AY Q+ +A +LF E+VS + Y L
Sbjct: 175 IFDQM-LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDD 233
Query: 241 FTSLEDLVGGL-QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
SL D + + +++ +G+ QN G + + ++FEE+P D+
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQN---------------GLLSEARRLFEELPIRDVF 278
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH-AL 358
W M+SG+ Q D+A F+++ ++ S+ +I+ +QI A
Sbjct: 279 AWTAMVSGFVQNGML-DEATRIFEEMP----EKNEVSWNAMIAGYVQ-----SQQIEKAR 328
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ ++ S S N +V Y++CGN++ A+ LFD MP+ + +S +MI+GYAQ G E
Sbjct: 329 ELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEE 388
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M LS+CA + G++ + GF+ + ++
Sbjct: 389 ALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALL 447
Query: 479 DLLGRAGKLTDAERLIE 495
+ G+ G + +A + E
Sbjct: 448 AMYGKCGSIEEAFDVFE 464
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSL 351
I D+V WN IS Y +K + + AL F + R ++ +IS SN
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQ-CESALSVFNGMRR----RSTVTYNAMISGYLSNNKFDC 109
Query: 352 GKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+++ E +R ++ N +++ Y K GNL AR LF++MPE + VS N+M++G+
Sbjct: 110 ARKV------FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQ+G EA ++F+ ML N I++ +LSA G++ + ++ F D E
Sbjct: 164 AQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARRLFDSKMDW-----E 214
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
++C++ R +L DA L + MP
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 40/242 (16%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L +C L GK LH +K N + +Y KCG + A F +
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKD 470
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP---QPDLVSYNTLISAYADCGDTESALSLFKD 121
+ S+N ++A YAR A LF+ + +PD V+ ++SA + G + + F
Sbjct: 471 IVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNS 530
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
M + G+ + + C+I L R G LD
Sbjct: 531 M---------YQNYGITANAKHYTCMIDLL-----------------------GRAGRLD 558
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA + M D +W +++ A +G G +A + EM G MY L S L
Sbjct: 559 EALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSG--MYVLLSNL 616
Query: 239 TA 240
A
Sbjct: 617 YA 618
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/665 (38%), Positives = 382/665 (57%), Gaps = 40/665 (6%)
Query: 48 GCLSAAHHAFNQT--QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
GC + H F +VF N LL AY + +A+AR++F ++ D V+YN ++
Sbjct: 151 GCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMG 210
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHY 163
+ G AL LF MR FT S ++T ++ +L L Q+H L +
Sbjct: 211 CSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLN 270
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
VNNSLL YS+ LD+ +R+F EM E +D VS+N ++ AY ++ L+LF+EM
Sbjct: 271 VFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYAWNQCAATVLRLFREMQ 329
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
L + A++L+ SL D+ G Q HA L+ G +G+ LID+Y+KC M
Sbjct: 330 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG--M 387
Query: 284 RDCMKV-FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
D K F + + W +I+GY Q ++ ++AL F + R G PD +F +I
Sbjct: 388 LDAAKSNFSNRSEKSAISWTALITGYVQNGQH-EEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
A S+L+ LG+Q+H+ I+ +S+ S + LV MY+KCG L++A R FD MPE N++
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFS-GSVLVDMYAKCGCLDEALRTFDEMPERNSI 505
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S N++I+ YA +G A+++FE ML P ++TF+SVL+AC+H G E KYF +M
Sbjct: 506 SWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 565
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI----------------- 504
K + P EHY+C+ID LGR G + ++++ MPF I
Sbjct: 566 KHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQEL 625
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AA+ +EP++A PYV+L+NIYA +G+WE+ A ++++MRDRGV+K+ G+SW+E+K+
Sbjct: 626 ARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQ 685
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
+++ F + D + PMI EI + L+ + ++M + GY PD K + L +HSE+
Sbjct: 686 KIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSER 745
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AF L++T G PI +MKNL C DCH IK IS I R+I VRD+ RFH FKDG CS
Sbjct: 746 LAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCS 805
Query: 673 CGDYW 677
CGDYW
Sbjct: 806 CGDYW 810
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 244/456 (53%), Gaps = 17/456 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L A F+Q H N+FS N++L+AY+ + +A+ LF P + ++ ++ A+A
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G T ALSLF+ M + D T++ ++ C + LH AI G D + V
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG---CTVPSLHPFAIKFGLDTHVFVC 173
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSL 225
N+LL Y ++G L A+RVF EM + KD V++N+M++ G +EGL +ALQLF M
Sbjct: 174 NTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMM--GCSKEGLHTQALQLFAAMRRA 230
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDM 283
+ +T +SILT + L+ G Q HA +++S N + + L+D Y+KC DM
Sbjct: 231 GIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM 290
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
R ++F+E+P+ D V +N +I+ Y+ + + L F+++ ++G+ + ++S
Sbjct: 291 R---RLFDEMPERDNVSYNVIIAAYAW-NQCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+L +GKQIHA + + + S + + NAL+ MYSKCG L+ A+ F E + +S
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 405
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
++I GY Q+G EAL+LF M + P TF S++ A + + G++ S +
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G++ S ++D+ + G L +A R + MP
Sbjct: 466 RS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 500
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 366/639 (57%), Gaps = 36/639 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL Y + I +A + F ++V +N ++ AY G+ + +F M+ + +
Sbjct: 355 LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ S L L +Q+H I GF V + L+ Y+++G LD A+ +
Sbjct: 415 QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E +D VSW +M+ Y QH EAL+LFQEM + + D +S ++A ++ L
Sbjct: 475 RLRE-EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALN 533
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q HA SG+ ++ IG+ L+ LYA+C G +D FE+I D + WN +ISG+
Sbjct: 534 QGQQIHAQSYISGYSEDLSIGNALVSLYARC-GRAQDAYLAFEKIDAKDNISWNALISGF 592
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
+Q + ++AL F ++N+ G + +F +SA +N + GKQIHA+ IK S
Sbjct: 593 AQSG-HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDS- 650
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+N L+ +YSKCG++EDA+R F MPE N VS N+MI GY+QHG G EA+ LFE M
Sbjct: 651 ETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMK 710
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + P ++TFV VLSAC+H G V EG YF M G P+ EHY C++DLLGRA L
Sbjct: 711 QLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALL 770
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
A IE MP P ++ + AA H L+LEP ++ YV+L+N+Y
Sbjct: 771 CCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMY 830
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A SGKW+ R++M+DRGV+K+PG SWIEVK +H F D HP+ ++I+ Y+++++
Sbjct: 831 AVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLN 890
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
+ + GYV D K+ HSEKLAVAFGLLS + PI V+KNLR+C
Sbjct: 891 ERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCN 950
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCHN IKF+S I+ R I VRD YRFH F+ G CSC DYW
Sbjct: 951 DCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 279/609 (45%), Gaps = 74/609 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL C G+ LH +K + ++ N + LYS+ G L AA F++
Sbjct: 215 VFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ S+N L++ A++ A QLF+++ +PD V+ +L+SA A G
Sbjct: 275 HRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG- 333
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
KQLH I G + SLL Y +
Sbjct: 334 --------------------------------KQLHSYVIKMGMSSDLIIEGSLLDLYVK 361
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
F E ++ E ++ V WN M+VAYGQ E+ +F +M L + YT S
Sbjct: 362 -CFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
IL TSL L G Q H +IKSGF N ++ S LID+YAK G++ + + + +
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK-HGELDTARGILQRLREE 479
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D+V W MI+GY+Q + ++ +AL F+++ G D+ F ISAC+ + + G+QI
Sbjct: 480 DVVSWTAMIAGYTQHDLFA-EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA + I S +S+ NALV++Y++CG +DA F+++ + +S N++I+G+AQ G
Sbjct: 539 HAQSY-ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGH 597
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EAL++F M + + TF S +SA A+T + +G++ +MM G++ E E +
Sbjct: 598 CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASN 656
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
+I L + G + DA+R F ++ N V + + Y+ G
Sbjct: 657 VLITLYSKCGSIEDAKR------------------EFFEMPEKNVVSWNAMITGYSQHGY 698
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH-PMIKEIHNYLEEMSRKMK 594
E ++ M+ G+ V V SH ++ E +Y MS K
Sbjct: 699 GSEAVSLFEEMKQLGLMP---------NHVTFVGVLSACSHVGLVNEGLSYFRSMS---K 746
Query: 595 QAGYVPDKE 603
+ G VP E
Sbjct: 747 EHGLVPKPE 755
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 164/619 (26%), Positives = 284/619 (45%), Gaps = 51/619 (8%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
HH F + N L+ Y++ + A+ +F+++ D VS+ +IS + G +
Sbjct: 140 HHGFGSSP----LVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRED 195
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLL 171
A+ LF M + + S +++A + L +QLH + G V N+L+
Sbjct: 196 EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALV 255
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
T YSR G L A+++F +M +D +S+NS++ Q ALQLF++M + D
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHR-RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+AS+L+A S+ G Q H+++IK G + I L+DLY KC D+ + F
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF-DIETAHEYFL 373
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
++VLWN M+ Y Q S ++ F ++ G P+ ++ ++ C++L
Sbjct: 374 TTETENVVLWNVMLVAYGQLGNLS-ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALD 432
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LG+QIH IK + N + V + L+ MY+K G L+ AR + R+ E + VS +MIAGY
Sbjct: 433 LGEQIHTQVIKSGFQFN-VYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGY 491
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
QH + EAL+LF+ M I NI F S +SACA + +GQ+ + + G+ +
Sbjct: 492 TQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHA-QSYISGYSED 550
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
+ ++ L R G+ DA E +++ + + + L + +
Sbjct: 551 LSIGNALVSLYARCGRAQDAYLAFE------------------KIDAKDNISWNALISGF 592
Query: 531 AASGKWEEVATIRRLMRDRGVQKK-----------PGFSWIEVKKQMHVFVAEDGSHPMI 579
A SG EE + M GV+ + I+ KQ+H + + G +
Sbjct: 593 AQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTG-YDSE 651
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSY------GEPILVMKN 633
E N L + K G + D ++ EK V++ + T Y E + + +
Sbjct: 652 TEASNVLITLYSK---CGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEE 708
Query: 634 LRICGDCHNAIKFISAIAG 652
++ G N + F+ ++
Sbjct: 709 MKQLGLMPNHVTFVGVLSA 727
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 225/466 (48%), Gaps = 24/466 (5%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNV---------LLAAYARQLRIASARQLFDQIPQPDLVS 98
GC ++ + HA +F L+ Y + +A +LFD IP ++
Sbjct: 19 GCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF 78
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN---LCLIKQLHCLA 155
+N +IS L LF M + D T + ++ A S + +Q+H
Sbjct: 79 WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
I+ GF V N L+ YS+NG +D AK VF + +KD VSW +M+ Q+ EA
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDSVSWVAMISGLSQNGREDEA 197
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+ LF +M + Y +S+L+A T +E G Q H ++K G + + + L+ L
Sbjct: 198 ILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL 257
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y++ G++ ++F ++ + D + +N++ISG +Q+ +SD+AL F+K+ PD
Sbjct: 258 YSRW-GNLIAAEQIFSKMHRRDRISYNSLISGLAQR-GFSDRALQLFEKMQLDCMKPDCV 315
Query: 336 SFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ ++SAC+++ GKQ+H+ IK+ + S+ I + +L+ +Y KC ++E A F
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI-IEGSLLDLYVKCFDIETAHEYFLT 374
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
N V N M+ Y Q G E+ +F M + P T+ S+L C G + G
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434
Query: 455 QK-YFSMMKDMFGFEPEGEHYSC--MIDLLGRAGKLTDAERLIEAM 497
++ + ++K F F Y C +ID+ + G+L A +++ +
Sbjct: 435 EQIHTQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARGILQRL 476
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 181/417 (43%), Gaps = 81/417 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+TC L G+ +H +K+ F+ Y+ + I +Y+K G L A +
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ--------------------------- 93
+ +V S+ ++A Y + A A +LF ++
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 94 ------------PDLVSYNTLISAYADCGDT----------------------------- 112
DL N L+S YA CG
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596
Query: 113 --ESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNN 168
E AL +F M + + + FT ++A++N N+ KQ+H + I G+D +N
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASN 656
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
L+T YS+ G +++AKR F+EM E K+ VSWN+M+ Y QH G EA+ LF+EM L L
Sbjct: 657 VLITLYSKCGSIEDAKREFFEMPE-KNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLM 715
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T +L+A + + + GL + + K G ++DL + + + C
Sbjct: 716 PNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAA--LLCCA 773
Query: 288 KVF-EEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ F EE+P +PD ++W T++S + + + +G F + + P+D + ++S
Sbjct: 774 REFIEEMPIEPDAMIWRTLLSACTV---HKNIEIGEFAARHLLELEPEDSATYVLLS 827
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/642 (40%), Positives = 377/642 (58%), Gaps = 38/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + +I AR +F+ + + DL+S+N++I+ A A+ LF +
Sbjct: 361 NSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLK 420
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D +T++ ++ A+S+ L L KQ+H AI + V+ +L+ YSRN + EA+
Sbjct: 421 PDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEV 480
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F D V+WN+M+ Y Q +G + L+LF M D +TLA++L L
Sbjct: 481 LFGRNN--FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLF 538
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G Q HA+ IKSG+ + + SG++D+Y KC GDM F+ IP PD V W T+I
Sbjct: 539 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC-GDMSAAQFAFDSIPVPDDVAWTTLI 597
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG + E ++AL F ++ +G PD+ + + A S L+ G+QIHA +K+
Sbjct: 598 SGCIENGE-EERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 656
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ V +LV MY+KCG+++DA LF R+ N + N+M+ G AQHG G EAL+LF+
Sbjct: 657 TSDPF-VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFK 715
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M I P +TF+ VLSAC+H+G V+E KY M +G +PE EHYSC+ D LGRA
Sbjct: 716 QMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRA 775
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G + +AE LI++M + + A L+LEP ++ YV+L+
Sbjct: 776 GLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 835
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA+ KW+E+ R +M+ V+K PGFSWIEVK ++H+FV +D S+P + I+ ++
Sbjct: 836 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVK 895
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+M R +KQ GYVP +KE+ L +HSEKLAVAFGLLST PI V+KNLR
Sbjct: 896 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 955
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCHNA+K+IS + REI +RD RFH FKDG CSCGDYW
Sbjct: 956 VCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 201/455 (44%), Gaps = 87/455 (19%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ + DL+ GK HA L +L N+ I +YSKCG L+ A
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYA------------ 100
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-----TESALSLFK 120
R++FD++P+ DLVS+N++++AYA + + A LF+
Sbjct: 101 -------------------RRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFR 141
Query: 121 DMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R+ T TLS ++ S +C + H A G D V +L+ Y + G
Sbjct: 142 ILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFG 201
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ E + +F EM +D V WN M+ AY + EA+ L
Sbjct: 202 KVKEGRVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAIDLSS------------------ 242
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC--MKVFEE---- 292
FH SG H N + L ++ SGD + +K FE
Sbjct: 243 -------------AFHT----SGLHPNEIT----LRLLSRISGDDSEAGQVKSFENGNDA 281
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSL 351
+++ N ++SGY +YS L CF + D +F+ V++ L S +L
Sbjct: 282 SAVSEIISRNKILSGYLHAGQYS-ALLKCFMDMVESDLECDQVTFILVLATAVRLDSLAL 340
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+Q+H + +K+ + ++V+N+L+ MY K + AR +F+ M E + +S NS+IAG A
Sbjct: 341 GQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIA 399
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
Q + +EA+ LF +L + P + T SVL A +
Sbjct: 400 QSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 44/247 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLKTC + GK +HA +K+ ++S+ + +Y KCG +SAA A
Sbjct: 526 TLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---- 581
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
FD IP PD V++ TLIS + G+ E AL +F
Sbjct: 582 ---------------------------FDSIPVPDDVAWTTLISGCIENGEEERALHVFS 614
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI-----KQLH--CLAIYCGFDHYASVNNSLLTC 173
MR D FT++ L ASS CL +Q+H L + C D + V SL+
Sbjct: 615 QMRLMGVLPDEFTIATLAKASS---CLTALEQGRQIHANALKLNCTSDPF--VGTSLVDM 669
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G +D+A +F + E+ + +WN+M+V QH EG EALQLF++M SL + D T
Sbjct: 670 YAKCGSIDDAYCLFKRI-EMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVT 728
Query: 234 LASILTA 240
+L+A
Sbjct: 729 FIGVLSA 735
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LGK HA + +E R VNN L++MYSKCG+L ARR+FD+MPE + VS NS++A Y
Sbjct: 64 LGKCTHARILALEENPERFLVNN-LISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAY 122
Query: 411 AQHGIGM-----EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
AQ G+ EA LF + + + + +T +L C H+G V + + +
Sbjct: 123 AQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI- 181
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---GSIALKAANHFLQLEPSNAVP 522
G + + ++++ + GK+ + L E MP+ ++ LKA LE
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA-----YLEMGFKEE 236
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
+ L++ + SG T+R L R G + G
Sbjct: 237 AIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAG 270
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/665 (38%), Positives = 382/665 (57%), Gaps = 40/665 (6%)
Query: 48 GCLSAAHHAFNQT--QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
GC + H F +VF N LL AY + +A+AR++F ++ D V+YN ++
Sbjct: 151 GCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMG 210
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHY 163
+ G AL LF MR FT S ++T ++ +L L Q+H L +
Sbjct: 211 CSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLN 270
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
VNNSLL YS+ LD+ +R+F EM E +D VS+N ++ AY ++ L+LF+EM
Sbjct: 271 VFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYAWNQCAATVLRLFREMQ 329
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
L + A++L+ SL D+ G Q HA L+ G +G+ LID+Y+KC M
Sbjct: 330 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG--M 387
Query: 284 RDCMKV-FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
D K F + + W +I+GY Q ++ ++AL F + R G PD +F +I
Sbjct: 388 LDAAKSNFSNRSEKSAISWTALITGYVQNGQH-EEALQLFSDMRRAGLRPDRATFSSIIK 446
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
A S+L+ LG+Q+H+ I+ +S+ S + LV MY+KCG L++A R FD MPE N++
Sbjct: 447 ASSSLAMIGLGRQLHSYLIRSGYKSSVFS-GSVLVDMYAKCGCLDEALRTFDEMPERNSI 505
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S N++I+ YA +G A+++FE ML P ++TF+SVL+AC+H G E KYF +M
Sbjct: 506 SWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 565
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI----------------- 504
K + P EHY+C+ID LGR G + ++++ MPF I
Sbjct: 566 KHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQEL 625
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AA+ +EP++A PYV+L+NIYA +G+WE+ A ++++MRDRGV+K+ G+SW+E+K+
Sbjct: 626 ARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQ 685
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
+++ F + D + PMI EI + L+ + ++M + GY PD K + L +HSE+
Sbjct: 686 KIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSER 745
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AF L++T G PI +MKNL C DCH IK IS I R+I VRD+ RFH FKDG CS
Sbjct: 746 LAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCS 805
Query: 673 CGDYW 677
CGDYW
Sbjct: 806 CGDYW 810
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 244/456 (53%), Gaps = 17/456 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L A F+Q H N+FS N++L+AY+ + +A+ LF P + ++ ++ A+A
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G T ALSLF+ M + D T++ ++ C + LH AI G D + V
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG---CTVPSLHPFAIKFGLDTHVFVC 173
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSL 225
N+LL Y ++G L A+RVF EM + KD V++N+M++ G +EGL +ALQLF M
Sbjct: 174 NTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMM--GCSKEGLHTQALQLFAAMRRA 230
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDM 283
+ +T +SILT + L+ G Q HA +++S N + + L+D Y+KC DM
Sbjct: 231 GIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM 290
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
R ++F+E+P+ D V +N +I+ Y+ + + L F+++ ++G+ + ++S
Sbjct: 291 R---RLFDEMPERDNVSYNVIIAAYAWN-QCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+L +GKQIHA + + + S + + NAL+ MYSKCG L+ A+ F E + +S
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 405
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
++I GY Q+G EAL+LF M + P TF S++ A + + G++ S +
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G++ S ++D+ + G L +A R + MP
Sbjct: 466 RS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 500
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 379/653 (58%), Gaps = 50/653 (7%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ +F N ++ Y++ L ++ A+ +FD + + VS+N++I+ + G A LF M
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285
Query: 123 REKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
R +G L+ I A+ LC KQLHC I G D ++ +L+ YS
Sbjct: 286 R-----LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYS 340
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ +D+A ++F M +++ VSW +++ Y Q+ A+ LF +M + + +T +
Sbjct: 341 KCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYS 400
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+ILTA + V Q HA ++K+ + + +G+ L D Y+K GD + K+FE I +
Sbjct: 401 TILTANAA----VSPSQIHALVVKTNYENSPSVGTALSDSYSKI-GDANEAAKIFELIDE 455
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GK 353
D+V W+ M+SGY+Q + + A+ F +L + G P++ +F V++AC+ + S+ GK
Sbjct: 456 KDIVAWSAMLSGYAQMGDI-EGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGK 514
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q H+ +IK SN + V++ALV MY+K GN+E A +F R + + VS NSMI+GYAQH
Sbjct: 515 QFHSCSIKSGF-SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQH 573
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G ++L++FE M N+ ITF+ V+SAC H G V EGQ+YF +M + P EH
Sbjct: 574 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEH 633
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLE 516
YSCM+DL RAG L A LI MPF G+ + AA + L+
Sbjct: 634 YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQ 693
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P ++ YV+L+NIYA +G W+E A +R+LM + V+K+ G+SWIEVK + F+A D SH
Sbjct: 694 PQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSH 753
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P I+ LEE+S ++K AGY PD KE L HSE+LA+AFGL++T
Sbjct: 754 PQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPP 813
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI ++KNLR+CGDCH IK IS I GR+I VRD+ RFH FK G CSCGDYW
Sbjct: 814 GTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 42/459 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK C D + GK +H +K + + +Y K + F++ + N
Sbjct: 98 VLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN 157
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V S+ LLA Y + G E AL LF M+
Sbjct: 158 VVSWTSLLAGYRQN-------------------------------GLNEQALKLFSQMQL 186
Query: 125 KRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + FT + ++ + + + K Q+H + I G D V NS++ YS++ + +
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
AK VF M E ++ VSWNSM+ + + LEA +LF M + L A+++
Sbjct: 247 AKAVFDSM-ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPDLVLW 301
+++++ Q H +IK+G + +I + L+ Y+KCS ++ D K+F + ++V W
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS-EIDDAFKLFCMMHGVQNVVSW 364
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
+ISGY Q +D+A+ F ++ R G P+ ++ +++A + +SPS QIHAL +K
Sbjct: 365 TAIISGYVQNGR-TDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPS---QIHALVVK 420
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
N SV AL YSK G+ +A ++F+ + E + V+ ++M++GYAQ G A++
Sbjct: 421 TNYE-NSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVK 479
Query: 422 LFEWMLETNIPPTNITFVSVLSACAH-TGKVAEGQKYFS 459
+F + + + P TF SVL+ACA T V +G+++ S
Sbjct: 480 IFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS 518
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 190/370 (51%), Gaps = 14/370 (3%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
++QLFD+ PQ L N L+ ++ + AL+LF +R TDG +LS ++
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG- 103
Query: 144 NLCLI-----KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
CL KQ+HC I CGF SV SL+ Y + +++ +RVF EM +K+ VS
Sbjct: 104 --CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVS 160
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
W S++ Y Q+ +AL+LF +M + + +T A++L + + G+Q H +I
Sbjct: 161 WTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVI 220
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
KSG +G+ ++++Y+K S + D VF+ + + V WN+MI+G+ +A
Sbjct: 221 KSGLDSTIFVGNSMVNMYSK-SLMVSDAKAVFDSMENRNAVSWNSMIAGFV-TNGLDLEA 278
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
F ++ G F VI C+N+ S KQ+H IK +++ AL+
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK-NGSDFDLNIKTALMV 337
Query: 378 MYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
YSKC ++DA +LF M N VS ++I+GY Q+G A+ LF M + P +
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHF 397
Query: 437 TFVSVLSACA 446
T+ ++L+A A
Sbjct: 398 TYSTILTANA 407
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
++F+E PQ L N ++ +S+ ++ + +AL F L R G D S CV+ C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQ-NKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105
Query: 348 SPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ GKQ+H IK + +SV +LV MY K ++ED R+FD M N VS S+
Sbjct: 106 FDRIVGKQVHCQCIKCGFVED-VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+AGY Q+G+ +AL+LF M I P TF +VL A G V +G + +M+ G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS-G 223
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + M+++ ++ ++DA+ + ++M
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 383/642 (59%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL +Y + + A LF + + D V++N L++ Y+ G A++LF M++ F
Sbjct: 178 NSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFR 237
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + ++TA +++ +Q+H + C F V N+LL YS++ + EA+++
Sbjct: 238 PSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKL 297
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
FYEM E+ D +S+N ++ + E+L+LF+E+ + + A++L+ + +
Sbjct: 298 FYEMPEV-DGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLN 356
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H+ I + +G+ L+D+YAKC + ++F ++ V W +IS
Sbjct: 357 LEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD-KFGEANRIFADLAHQSSVPWTALIS 415
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIR 365
GY QK + D L F +++R D ++ ++ AC+NL S +LGKQ+H+ I+
Sbjct: 416 GYVQKGLHED-GLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCL 474
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
SN S +ALV MY+KCG++++A ++F MP N+VS N++I+ YAQ+G G ALR FE
Sbjct: 475 SNVFS-GSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQ 533
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M+ + + P +++F+S+L AC+H G V EG +YF+ M ++ EP EHY+ M+D+L R+G
Sbjct: 534 MIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSG 593
Query: 486 KLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP-SNAVPYVMLA 527
+ +AE+L+ MPF P I A+KAA+ ++ +A PYV ++
Sbjct: 594 RFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMS 653
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+G+W+ V +++ +R+RG++K P +SW+E+K++ HVF A D SHP KEI L+
Sbjct: 654 NIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLD 713
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
E+ ++M++ GY PD K + L +HSE++A+AF L+ST G PILVMKNLR
Sbjct: 714 ELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLR 773
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH AIK IS I REITVRD+ RFH F DG CSC DYW
Sbjct: 774 ACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 233/460 (50%), Gaps = 20/460 (4%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L AA F++ H NV S N ++ Y + +++AR LFD + Q +V++ LI YA
Sbjct: 56 GDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYA 115
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS 165
A +LF DM D TL+ L++ + ++ + Q+H + G+D
Sbjct: 116 QHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLM 175
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V NSLL Y + L A +F M E KD V++N+++ Y + +A+ LF +M L
Sbjct: 176 VCNSLLDSYCKTRSLGLACHLFKHMAE-KDNVTFNALLTGYSKEGFNHDAINLFFKMQDL 234
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+T A++LTA ++D+ G Q H+ ++K F N + + L+D Y+K + +
Sbjct: 235 GFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSK-HDRIVE 293
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
K+F E+P+ D + +N +I+ + +++L F++L + F ++S +
Sbjct: 294 ARKLFYEMPEVDGISYNVLITCCAWNGRV-EESLELFRELQFTRFDRRQFPFATLLSIAA 352
Query: 346 N-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
N L+ +G+QIH+ I + S + V N+LV MY+KC +A R+F + ++V
Sbjct: 353 NSLNLEMGRQIHSQAIVTDAIS-EVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWT 411
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM---- 460
++I+GY Q G+ + L+LF M I + T+ S+L ACA+ + G++ S
Sbjct: 412 ALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRS 471
Query: 461 --MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++F S ++D+ + G + +A ++ + MP
Sbjct: 472 GCLSNVFS-------GSALVDMYAKCGSIKEALQMFQEMP 504
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 28/374 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+++ Y ++G L A+ +F M + + V+W ++ Y QH LEA LF +M +
Sbjct: 77 NTMIMGYLKSGNLSTARSLFDSMVQ-RSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGM 135
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D TLA++L+ FT E + Q H H++K G+ + + L+D Y K C
Sbjct: 136 VPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLAC- 194
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F+ + + D V +N +++GYS KE ++ A+ F K+ +G+ P + +F V++A +
Sbjct: 195 HLFKHMAEKDNVTFNALLTGYS-KEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQM 253
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+Q+H+ +K N + V NAL+ YSK + +AR+LF MPE + +S N +
Sbjct: 254 DDIEFGQQVHSFVVKCNFVWN-VFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS--MMKDM 464
I A +G E+L LF + T F ++LS A++ + G++ S ++ D
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYV 524
G + ++D+ + K +A R+ F L ++VP+
Sbjct: 373 ISEVLVG---NSLVDMYAKCDKFGEANRI------------------FADLAHQSSVPWT 411
Query: 525 MLANIYAASGKWEE 538
L + Y G E+
Sbjct: 412 ALISGYVQKGLHED 425
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L +L G+ +H+ + + N + +Y+KC
Sbjct: 344 FATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD------------- 390
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ A ++F + V + LIS Y G E L LF +
Sbjct: 391 ------------------KFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D T + ++ A +N +L L KQLH I G ++L+ Y++ G
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ EA ++F EM +++ VSWN+++ AY Q+ +G AL+ F++M+ L + + SIL
Sbjct: 493 IKEALQMFQEM-PVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILC 551
Query: 240 AFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
A + + GLQ+ + + + ++D+ + SG + K+ +P +PD
Sbjct: 552 ACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCR-SGRFDEAEKLMARMPFEPD 610
Query: 298 LVLWNTMIS 306
++W+++++
Sbjct: 611 EIMWSSILN 619
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 52/238 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C L GK LH+ +++ GCLS
Sbjct: 444 TYASILRACANLASLTLGKQLHSRIIRS-------------------GCLS--------- 475
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFS + L+ YA+ I A Q+F ++P + VS+N LISAYA GD AL F+
Sbjct: 476 ---NVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFE 532
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN------------ 168
M + + ++ A S HC + G ++ S+
Sbjct: 533 QMIHSGLQPNSVSFLSILCACS---------HCGLVEEGLQYFNSMTQVYKLEPRREHYA 583
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
S++ R+G DEA+++ M DE+ W+S++ + H+ A++ ++ +++
Sbjct: 584 SMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMK 641
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N V + + G+L AR+LFD MP N +S N+MI GY + G A LF+ M++ ++
Sbjct: 46 NFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSV- 104
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+T+ ++ A + E F++ DM
Sbjct: 105 ---VTWTMLIGGYAQHNRFLEA---FNLFADM 130
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/734 (36%), Positives = 412/734 (56%), Gaps = 65/734 (8%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF +K+C +G R L L + K + ++ + ++ +CG + A F
Sbjct: 140 TFAYAMKSCGALGERSLAL--QLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFV 197
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ + +F N +L Y + + A +LFD +P+ D+VS+N ++SA + G AL +
Sbjct: 198 RIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDM 257
Query: 119 FKDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAIY---CGFDHYASVNNSLLTC 173
DM+ K R D+ +T S A ++L KQLH I C D Y V ++L+
Sbjct: 258 VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPC-IDPY--VASALVEL 314
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G EAK VF + + ++ V+W ++ + QH E+++LF +M + + LD +
Sbjct: 315 YAKCGCFKEAKGVFNSLHD-RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFA 373
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
LA++++ S DL G Q H+ +KSG Q + + LI +YAKC +++ +F +
Sbjct: 374 LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD-NLQSAESIFRFM 432
Query: 294 PQPDLVLWNTMISGYSQ------KEEYSD-----------QALGCFKK------------ 324
+ D+V W +MI+ +SQ E+ D LG + +
Sbjct: 433 NEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYN 492
Query: 325 --LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
L+ PD ++V + C++L + LG QI T+K+ + + SV NA++ MYSK
Sbjct: 493 VMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILD-TSVANAVITMYSK 551
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG + +AR++FD + + VS N+MI GY+QHG+G +A+ +F+ +L+ P I++V+V
Sbjct: 552 CGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAV 611
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
LS C+H+G V EG+ YF MMK + P EH+SCM+DLLGRAG LT+A+ LI+ MP P
Sbjct: 612 LSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKP 671
Query: 502 GS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
+ +A AA H +L+ ++ Y+++A IYA +GK ++ A IR+
Sbjct: 672 TAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRK 731
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV-PDKE 603
LMRD+G++K PG+SW+EV ++HVF A+D SHP + I L+E+ K+ + GYV D
Sbjct: 732 LMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVRTDSP 791
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
+ +HHSEKLAVAFGL+S PI +MKNLRICGDCH IK IS++ GRE +RD RF
Sbjct: 792 RSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRF 851
Query: 664 HCFKDGRCSCGDYW 677
H F G CSCGDYW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/562 (26%), Positives = 249/562 (44%), Gaps = 73/562 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF-NQT 60
F L++C R L ++LH + + + +L N + Y CG L A
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H NV + NV+L Y + R++ A +LF ++P D+ S+NTL+S Y ++L F
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126
Query: 121 DM-REKRFDTDGFT-------------------LSGLIT--ASSNNLCLIKQLHCLAIYC 158
M R + FT L G++ S ++ + L + + C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186
Query: 159 GFDHYAS------------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
G AS NS+L Y + +D A +F M E +D VSWN MV A
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPE-RDVVSWNMMVSAL 245
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q EAL + +M S + LD T S LTA L L G Q HA +I++ +
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
++ S L++LYAKC G ++ VF + + V W +I+G+ Q ++ +++ F ++
Sbjct: 306 YVASALVELYAKC-GCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFT-ESVELFNQMR 363
Query: 327 RVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC--- 382
D + +IS C S + LG+Q+H+L +K + + V+N+L++MY+KC
Sbjct: 364 AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLK-SGQIQAVVVSNSLISMYAKCDNL 422
Query: 383 ----------------------------GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
GN+ AR FD M N ++ N+M+ Y QHG
Sbjct: 423 QSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHG 482
Query: 415 IGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
+ LR++ ML E ++ P +T+V++ CA G G + + G +
Sbjct: 483 AEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLILDTSV 541
Query: 474 YSCMIDLLGRAGKLTDAERLIE 495
+ +I + + G++ +A ++ +
Sbjct: 542 ANAVITMYSKCGRILEARKVFD 563
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 266/710 (37%), Positives = 384/710 (54%), Gaps = 72/710 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +LK C L GK +HA + + Y+ + +Y+KCG + A FN +
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV VS+ +I+ +A G E A F
Sbjct: 369 GRNV-------------------------------VSWTAMIAGFAQHGRMEEAFLFFNK 397
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M E + + T ++ A S L +Q+H I G+ V +LL+ Y++ G
Sbjct: 398 MIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGS 457
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L +A+ VF + + ++ V+WN+M+ AY QH + A+ FQ ++ + D T SIL
Sbjct: 458 LMDARNVFERISK-QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILN 516
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
S + L G + +I++GF + HI + L+ ++ C GD+ M +F ++P+ DLV
Sbjct: 517 VCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNC-GDLMSAMNLFNDMPERDLV 575
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP---SLGKQIH 356
WNT+I+G+ Q E + A FK + G PD +F +++AC+ SP + G+++H
Sbjct: 576 SWNTIIAGFVQHGE-NQFAFDYFKMMQESGVKPDQITFTGLLNACA--SPEALTEGRRLH 632
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
AL + + + + V L++MY+KCG+++DA +F +P+ N S SMI GYAQHG G
Sbjct: 633 ALITEAALDCD-VVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRG 691
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL LF M + + P ITFV LSACAH G + EG +F MKD F EP EHY C
Sbjct: 692 KEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGC 750
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
M+DL GRAG L +A I M P S +A K A L+L+P++
Sbjct: 751 MVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPND 810
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+L+NIYAA+G W+EV +R++M DRGV KKPG SWIEV ++H+F ++D +HP I
Sbjct: 811 DGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQI 870
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
+EIH L + +MK+ GYVPD KE L HHSE+LA+A+GLL T P
Sbjct: 871 EEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTP 930
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I++ KNLR+CGDCH A K IS I R+I RD+ RFH FKDG CSCGD+W
Sbjct: 931 IVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/634 (25%), Positives = 280/634 (44%), Gaps = 102/634 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C+ ++L G+ +H + + ++ N I +Y+KCG ++A F++
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+V+S+N+LL Y + R A +L +Q+ Q PD ++ +++A AD + +
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS------------NNLCLIKQLHCLAIYCGFDHYA 164
LF + +DTD F + LI NNL + ++ G +
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 165 SVNN---------------------SLLTCYSRNGFLDEAKRVFYEMGEI---------- 193
SLL + L++ KRV M E+
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 194 ------------------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ VSW +M+ + QH EA F +M+ +
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ T SIL A + L G Q H +IK+G+ + + + L+ +YAKC G + D V
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKC-GSLMDARNV 464
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE I + ++V WN MI+ Y Q E+Y D A+ F+ L + G PD +F +++ C SP
Sbjct: 465 FERISKQNVVAWNAMITAYVQHEKY-DNAVATFQALLKEGIKPDSSTFTSILNVCK--SP 521
Query: 350 S---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
LGK + +L I+ S+ + + NALV+M+ CG+L A LF+ MPE + VS N++
Sbjct: 522 DALELGKWVQSLIIRAGFESD-LHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IAG+ QHG A F+ M E+ + P ITF +L+ACA + EG++ +++ +
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEA-A 639
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
+ + + +I + + G + DA + +P N + +
Sbjct: 640 LDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP------------------KKNVYSWTSM 681
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
YA G+ +E + M+ GV KP WI
Sbjct: 682 ITGYAQHGRGKEALELFCQMQQEGV--KP--DWI 711
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 190/403 (47%), Gaps = 37/403 (9%)
Query: 154 LAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
L I FD + S YS+ N F+D IK+ N+ + +
Sbjct: 35 LVILEEFDTFRLYTTSFSGSYSKGQGNEFVD-----------IKNTQRANAFLNRLSKAG 83
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+ EA+ + + S + + T +S+L ++L G + H H+ S + + +
Sbjct: 84 QLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWN 143
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
LI +YAKC G+ ++F+E+P D+ WN ++ GY Q Y ++A +++ + G
Sbjct: 144 MLISMYAKC-GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY-EEAFRLHEQMVQDGV 201
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PD +FV +++AC++ + G ++ +L + ++ + V AL+ M+ KCG ++DA
Sbjct: 202 KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTD-LFVGTALINMHIKCGGVDDAL 260
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
++F+ +P + ++ SMI G A+H +A LF+ M E + P + FVS+L AC H
Sbjct: 261 KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPE 320
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAA 509
+ +G++ + MK++ G + E + ++ + + G + DA +
Sbjct: 321 ALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDALEV---------------- 363
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
F ++ N V + + +A G+ EE M + G++
Sbjct: 364 --FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 139/322 (43%), Gaps = 60/322 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK + +L ++ ++ N + ++ CG L +A + FN
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFN-- 567
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P+ DLVS+NT+I+ + G+ + A FK
Sbjct: 568 -----------------------------DMPERDLVSWNTIIAGFVQHGENQFAFDYFK 598
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E D T +GL+ A ++ L ++LH L D V L++ Y++ G
Sbjct: 599 MMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCG 658
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A VF+ + + K+ SW SM+ Y QH G EAL+LF +M + D T L
Sbjct: 659 SIDDAHLVFHNLPK-KNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGAL 717
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH------------QNSHIGSGLIDLYAKCSGDMRDC 286
+A HA LIK G H + H G ++DL+ + +G + +
Sbjct: 718 SACA-----------HAGLIKEGLHHFESMKDFNIEPRMEHYGC-MVDLFGR-AGLLHEA 764
Query: 287 MKVFEEIP-QPDLVLWNTMISG 307
++ ++ +PD LW ++
Sbjct: 765 VEFINKMQVKPDSRLWGALLGA 786
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/712 (35%), Positives = 405/712 (56%), Gaps = 73/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C + TG+ +H +KN + ++ + +Y+KC C+S A F
Sbjct: 164 TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL 223
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ FD+ + V + +++ YA GD A+ F+
Sbjct: 224 E--------------------------FDR---KNHVLWTAMVTGYAQNGDGYKAVEFFR 254
Query: 121 DMREKRFDTDGFTLSGLITASSNNL--CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + + +T ++TA S+ L C +Q+H + GF V ++L+ Y++ G
Sbjct: 255 YMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCG 314
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L AK + M E D VSWNS++V + +H EAL+LF+ M + +D YT S+L
Sbjct: 315 DLKNAKNMLETM-EDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVL 373
Query: 239 TAFTSLEDLVGGLQ---FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+VG + H +IK+GF + + L+D+YAK +GDM VFE++ +
Sbjct: 374 NCC-----VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAK-TGDMDCAYTVFEKMLE 427
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D++ W ++++GY+Q + +++L F + G +PD ++SAC+ L+ GKQ
Sbjct: 428 KDVISWTSLVTGYAQNNSH-EESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQ 486
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H IK +R ++ SV N+LVAMY+KCG L+DA +F M + ++ ++I GYAQ+G
Sbjct: 487 VHLDFIKSGLRWSQ-SVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNG 545
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G +L+ ++ M+ + P ITF+ +L AC+H G V EG+KYF M ++G +P EHY
Sbjct: 546 KGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHY 605
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
+CMIDL GR+GKL +A++L++ M P + +A +AA + +LEP
Sbjct: 606 ACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEP 665
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
NA+PYVML+N+Y+AS KW +VA IR+LM+ +G+ K+PG SW+E+ +++ F+++D HP
Sbjct: 666 MNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHP 725
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
EI+ ++E+ ++K+AGYVPD KE L +HSEKLAVAFGLL+
Sbjct: 726 REAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPS 785
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI + KNLR+CGDCH+A+K+IS + R I +RD+ FH F++G CSCGDYW
Sbjct: 786 APIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 252/472 (53%), Gaps = 16/472 (3%)
Query: 33 SAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP 92
S Y +N + SK G ++ A F++ + +S+N ++++Y R+ AR+LFD
Sbjct: 64 SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 123
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--- 149
++++++IS Y G A LF+ MR + + FTL ++ S +L LI+
Sbjct: 124 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCS-SLGLIQTGE 182
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEVSWNSMVVAYGQ 208
+H + GF+ V L+ Y++ + EA+ +F + + K+ V W +MV Y Q
Sbjct: 183 MIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQ 242
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ +G +A++ F+ M + + + YT +ILTA +S+ G Q H ++KSGF N ++
Sbjct: 243 NGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYV 302
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
S L+D+YAKC GD+++ + E + D+V WN+++ G+ + ++AL FK ++
Sbjct: 303 QSALVDMYAKC-GDLKNAKNMLETMEDDDVVSWNSLMVGFV-RHGLEEEALRLFKNMHGR 360
Query: 329 GYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
DD +F V++ C +++P K +H L IK + ++ V+NALV MY+K G+++
Sbjct: 361 NMKIDDYTFPSVLNCCVVGSINP---KSVHGLIIKTGFENYKL-VSNALVDMYAKTGDMD 416
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A +F++M E + +S S++ GYAQ+ E+L++F M T + P S+LSACA
Sbjct: 417 CAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACA 476
Query: 447 HTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G Q + +K G Y+ ++ + + G L DA+ + +M
Sbjct: 477 ELTLLEFGKQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSM 526
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/709 (35%), Positives = 405/709 (57%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C +L G+ +H+L ++ ++S + +YSKCG
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCG------------ 379
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LA A ++F +I PD+VS++ +I+ G + A +FK
Sbjct: 380 -----------LAG--------DALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFK 420
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + FTL+ L++A+++ +L + +H GF++ +V N+L+T Y + G
Sbjct: 421 RMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIG 480
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ + RVF E +D +SWN+++ + + L++F +M++ +MYT SIL
Sbjct: 481 SVQDGCRVF-EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ +SL D+ G Q HA ++K+ N +G+ L+D+YAK + + D +F + + DL
Sbjct: 540 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK-NRFLEDAETIFNRLIKRDL 598
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
W +++GY+Q + ++A+ CF ++ R G P++ + +S CS ++ G+Q+H+
Sbjct: 599 FAWTVIVAGYAQDGQ-GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS 657
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ IK +S + V +ALV MY+KCG +EDA +FD + +TVS N++I GY+QHG G
Sbjct: 658 MAIKAG-QSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGG 716
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL+ FE ML+ P +TF+ VLSAC+H G + EG+K+F+ + ++G P EHY+CM
Sbjct: 717 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 776
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNA 520
+D+LGRAGK + E IE M G+I +AA +LEP
Sbjct: 777 VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID 836
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L+N++AA G W++V +R LM RGV+K+PG SW+EV Q+HVF++ DGSHP I+
Sbjct: 837 SNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIR 896
Query: 581 EIHNYLEEMSRKMKQAGYVP----------DKEKR--LVHHSEKLAVAFGLLSTSYGEPI 628
EIH L+++ +K+ GY P D+EK+ L +HSE+LA+AF LLSTS + I
Sbjct: 897 EIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTI 956
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLRICGDCH+ +K IS I +E+ VRD FH FK+G CSC ++W
Sbjct: 957 RIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 264/575 (45%), Gaps = 90/575 (15%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+TC + DL GK++H +K+ + ++L N + +Y+KCG + A F +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQ---------------------------- 93
+V S+ L+ + + + A LF ++ +
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 94 -----------PDLVSYNTLISAYADCG-------------------------------D 111
DL + L+ YA CG D
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
E L+LF M + FTLS ++ A+S NL + +H LAI G + ++
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ YS+ G +A +VF + E D VSW++++ Q + EA ++F+ M +
Sbjct: 371 LVDMYSKCGLAGDALKVFVRI-EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ +TLAS+++A T L DL G HA + K GF ++ + + L+ +Y K G ++D +V
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKI-GSVQDGCRV 488
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE DL+ WN ++SG+ E D L F ++ G++P+ +F+ ++ +CS+LS
Sbjct: 489 FEATTNRDLISWNALLSGF-HDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 547
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
LGKQ+HA +K + N V ALV MY+K LEDA +F+R+ + + + ++A
Sbjct: 548 VDLGKQVHAQIVKNSLDGNDF-VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 606
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM------K 462
GYAQ G G +A++ F M + P T S LS C+ + G++ SM
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 666
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
DMF S ++D+ + G + DAE + + +
Sbjct: 667 DMF-------VASALVDMYAKCGCVEDAEVVFDGL 694
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 23/318 (7%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +L S DL G H +IKSG + +SH+ + L+++YAKC C KVF EIP
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC-KVFGEIP 190
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGK 353
+ D+V W +I+G+ E Y A+ F ++ R G ++ ++ + ACS L GK
Sbjct: 191 ERDVVSWTALITGFV-AEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGK 249
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q+HA IK+ S+ + V +ALV +Y+KCG + A R+F MP+ N VS N+++ G+AQ
Sbjct: 250 QVHAEAIKVGDFSD-LFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQM 308
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G + L LF M + I + T +VL CA++G + GQ S+ + G E +
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRI-GCELDEFI 367
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
C++D+ + G DA ++ F+++E + V + +
Sbjct: 368 SCCLVDMYSKCGLAGDALKV------------------FVRIEDPDVVSWSAIITCLDQK 409
Query: 534 GKWEEVATIRRLMRDRGV 551
G+ E A + + MR GV
Sbjct: 410 GQSREAAEVFKRMRHSGV 427
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/733 (36%), Positives = 413/733 (56%), Gaps = 63/733 (8%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF V+K+C +G R+L L L+ K + + ++ +CG + A F+
Sbjct: 140 TFCCVMKSCGALGCREL--APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 197
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q + +F N +LA YA+ I A + F+ + + D+VS+N +I+A + G AL L
Sbjct: 198 QIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGL 257
Query: 119 FKDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC--GFDHYASVNNSLLTCY 174
+M K R D+ +T S A +L KQLH I D Y V ++L+ Y
Sbjct: 258 VVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY--VASALIELY 315
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G EAKRVF + + ++ VSW ++ Q+ ++++LF +M + + +D + L
Sbjct: 316 AKCGSFKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A++++ + DL G Q H+ +KSG ++ + + LI LYAKC GD+++ VF +
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC-GDLQNAEFVFSSMS 433
Query: 295 QPDLVLWNTMISGYSQ------KEEYSD-----------QALGCFKK------------- 324
+ D+V W +MI+ YSQ E+ D LG + +
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSA 493
Query: 325 -LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
L++ PD ++V + C+++ + LG QI T+K + N +SV NA + MYSKC
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILN-VSVANAAITMYSKC 552
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G + +A++LFD + + VS N+MI GY+QHG+G +A + F+ ML P I++V+VL
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
S C+H+G V EG+ YF MM + G P EH+SCM+DLLGRAG LT+A+ LI+ MP P
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672
Query: 503 S-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ +A AA H +L+ ++ Y++LA IY+ +GK ++ A +R+L
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKR 605
MRD+G++K PG+SW+EV+ ++HVF A+D SHP + I N L+E+ K+ GYV + R
Sbjct: 733 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRTESPR 792
Query: 606 L-VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
+HHSEKLAVAFG++S PI +MKNLRICGDCH IK IS++ RE +RD RFH
Sbjct: 793 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFH 852
Query: 665 CFKDGRCSCGDYW 677
FK G CSCGDYW
Sbjct: 853 HFKSGSCSCGDYW 865
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 235/505 (46%), Gaps = 44/505 (8%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN-QTQHAN 64
L++C R L ++LH + + + +L N + Y CG LS A + N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-R 123
V + N+++ YA+Q ++ A +LFD++P+ D+ S+NTL+S Y L F M R
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA--SVNNSLLTCYSRNGFLD 181
+ FT ++ + C L ++ FD + V +L+ + R G++D
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 182 EAKRVFYE-------------------------------MGEIKDEVSWNSMVVAYGQHR 210
A R+F + M E +D VSWN M+ A Q
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE-RDVVSWNMMIAALSQSG 249
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EAL L EM + LD T S LTA L L G Q HA +I+S + ++ S
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
LI+LYAKC G ++ +VF + + V W +I G Q E +S +++ F ++
Sbjct: 310 ALIELYAKC-GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFS-KSVELFNQMRAELM 367
Query: 331 HPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
D + +IS C N + LG+Q+H+L +K + I V+N+L+++Y+KCG+L++A
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLK-SGHNRAIVVSNSLISLYAKCGDLQNAE 426
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+F M E + VS SMI Y+Q G ++A F+ M N IT+ ++L A G
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNA----ITWNAMLGAYIQHG 482
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHY 474
+G K +S M P+ Y
Sbjct: 483 AEEDGLKMYSAMLSQKDVTPDWVTY 507
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
++ +I+ + +N ++ Y+K G+L DA LFDRMP + S N++++GY Q ++
Sbjct: 62 LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG 121
Query: 420 LRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
L F M + + P TF V+ +C G + + F F + + + ++
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWK-FDFWGDPDVETALV 180
Query: 479 DLLGRAGKLTDAERLIEAM---------PFNPGSIALKAANH----FLQLEPSNAVPYVM 525
D+ R G + A RL + G L +H F + + V + M
Sbjct: 181 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + SG+ E + M +GV+
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVR 267
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/733 (36%), Positives = 414/733 (56%), Gaps = 63/733 (8%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF V+K+C +G R+L L L+ K + + ++ +CG + A F+
Sbjct: 140 TFCCVMKSCGALGCREL--APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 197
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q + +F N +LA YA+ I A + F+ + + D+VS+N +I+A + G AL L
Sbjct: 198 QIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGL 257
Query: 119 FKDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC--GFDHYASVNNSLLTCY 174
+M K R D+ +T S A +L KQLH I D Y V ++L+ Y
Sbjct: 258 VVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY--VASALIELY 315
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G EAKRVF + + ++ VSW ++ Q+ ++++LF +M + + +D + L
Sbjct: 316 AKCGSFKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A++++ + DL G Q H+ +KSG ++ + + LI LYAKC GD+++ VF +
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC-GDLQNAEFVFSSMS 433
Query: 295 QPDLVLWNTMISGYSQ-------KEEYSDQA----------LGCFKK------------- 324
+ D+V W +MI+ YSQ +E + A LG + +
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 493
Query: 325 -LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
L++ PD ++V + C+++ + LG QI T+K + N +SV NA + MYSKC
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILN-VSVANAAITMYSKC 552
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G + +A++LFD + + VS N+MI GY+QHG+G +A + F+ ML P I++V+VL
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
S C+H+G V EG+ YF MM + G P EH+SCM+DLLGRAG LT+A+ LI+ MP P
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672
Query: 503 S-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ +A AA H +L+ ++ Y++LA IY+ +GK ++ A +R+L
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKR 605
MRD+G++K PG+SW+EV+ ++HVF A+D SHP + I N ++E+ K+ GYV + R
Sbjct: 733 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPR 792
Query: 606 L-VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
+HHSEKLAVAFG++S PI +MKNLRICGDCH IK IS++ RE +RD RFH
Sbjct: 793 SEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFH 852
Query: 665 CFKDGRCSCGDYW 677
FK G CSCGDYW
Sbjct: 853 HFKSGSCSCGDYW 865
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 235/505 (46%), Gaps = 44/505 (8%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN-QTQHAN 64
L++C R L ++LH + + + +L N + Y CG LS A + N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-R 123
V + N+++ YA+Q ++ A +LFD++P+ D+ S+NTL+S Y L F M R
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA--SVNNSLLTCYSRNGFLD 181
+ FT ++ + C L ++ FD + V +L+ + R G++D
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 182 EAKRVFYE-------------------------------MGEIKDEVSWNSMVVAYGQHR 210
A R+F + M E +D VSWN M+ A Q
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE-RDVVSWNMMIAALSQSG 249
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EAL L EM + LD T S LTA L L G Q HA +I+S + ++ S
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
LI+LYAKC G ++ +VF + + V W +I G Q E +S +++ F ++
Sbjct: 310 ALIELYAKC-GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFS-KSVELFNQMRAELM 367
Query: 331 HPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
D + +IS C N + LG+Q+H+L +K + I V+N+L+++Y+KCG+L++A
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLK-SGHNRAIVVSNSLISLYAKCGDLQNAE 426
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+F M E + VS SMI Y+Q G ++A F+ M N IT+ ++L A G
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA----ITWNAMLGAYIQHG 482
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHY 474
+G K +S M P+ Y
Sbjct: 483 AEEDGLKMYSAMLSQKDVTPDWVTY 507
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
++ +I+ + +N ++ Y+K G+L DA LFDRMP + S N++++GY Q ++
Sbjct: 62 LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG 121
Query: 420 LRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
L F M + + P TF V+ +C G + + F F + + + ++
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWK-FDFWGDPDVETALV 180
Query: 479 DLLGRAGKLTDAERLIEAM---------PFNPGSIALKAANH----FLQLEPSNAVPYVM 525
D+ R G + A RL + G L +H F + + V + M
Sbjct: 181 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + SG+ E + M +GV+
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVR 267
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/690 (37%), Positives = 396/690 (57%), Gaps = 61/690 (8%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
++ +CG + A F+Q + VF N +LA YA+ + A +LF+ +P+ D+VS+N +
Sbjct: 206 MFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMM 265
Query: 103 ISAYADCGDTESALSLFKDM--REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY--- 157
+SA + G ALS+ DM R R D+ +T S A ++L KQLH I
Sbjct: 266 VSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLP 325
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
C D Y V ++++ Y++ G EA+RVF + + ++ VSW ++ + Q+ E+L+
Sbjct: 326 C-IDPY--VASAMVELYAKCGCFKEARRVFSSLRD-RNTVSWTVLIGGFLQYGCFSESLE 381
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF +M + + +D + LA+I++ ++ D+ Q H+ +KSG + I + LI +YA
Sbjct: 382 LFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYA 441
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ------KEEYSD-----------QALG 320
KC G++++ +F + + D+V W M++ YSQ E+ D LG
Sbjct: 442 KC-GNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLG 500
Query: 321 CFKK--------------LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIR 365
+ + L PD ++V + C+++ + LG QI T+K+ +
Sbjct: 501 AYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLI 560
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ SV NA++ MYSKCG + +AR++FD + + VS N+MI GY+QHG+G +A+ +F+
Sbjct: 561 LD-TSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 619
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML+ P I++V+VLS+C+H+G V EG+ YF M+K P EH+SCM+DLL RAG
Sbjct: 620 MLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAG 679
Query: 486 KLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLAN 528
L +A+ LI+ MP P + +A AA H L+ ++ Y++LA
Sbjct: 680 NLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAK 739
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +GK + A +R+LMRD+G++K PG+SW+EVK ++HVF AED SHP + I L+E
Sbjct: 740 IYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDE 799
Query: 589 MSRKMKQAGYVPDKEKRL-VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFI 647
+ K+ Q GYV + R +HHSEKLAVAFG+++ PI +MKNLRICGDCH IK I
Sbjct: 800 LMEKIAQLGYVRTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLI 859
Query: 648 SAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
S + GRE +RD RFH FK G CSCGDYW
Sbjct: 860 STVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 257/559 (45%), Gaps = 75/559 (13%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF-NQTQHAN 64
L++C R L ++LH + + + +L N + Y CG L A N
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V + N+++ YA+ ++ A +LF ++P+ D+ S+NTL+S Y G A+ F MR
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR- 153
Query: 125 KRFDT--DGFT-------------------LSGLIT--ASSNNLCLIKQLHCLAIYCGFD 161
+ D+ + FT L GL+T + + + + + CG
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213
Query: 162 HYAS------------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+AS NS+L Y+++ +D A +F M E +D VSWN MV A Q
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPE-RDVVSWNMMVSALSQS 272
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
EAL + +M + + LD T S LTA L L G Q HA +I+S + ++
Sbjct: 273 GRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVA 332
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
S +++LYAKC G ++ +VF + + V W +I G+ Q +S ++L F ++
Sbjct: 333 SAMVELYAKC-GCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFS-ESLELFNQMRAEL 390
Query: 330 YHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED- 387
D + +IS CSN + L +Q+H+L++K + + ++N+L++MY+KCGNL++
Sbjct: 391 MTVDQFALATIISGCSNRMDMCLARQLHSLSLK-SGHTRAVVISNSLISMYAKCGNLQNA 449
Query: 388 ------------------------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
AR FD M N ++ N+M+ Y QHG
Sbjct: 450 ESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEE 509
Query: 418 EALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+ L+++ ML E ++ P +T+V++ CA G G + + G + +
Sbjct: 510 DGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKV-GLILDTSVMNA 568
Query: 477 MIDLLGRAGKLTDAERLIE 495
+I + + G++++A ++ +
Sbjct: 569 VITMYSKCGRISEARKIFD 587
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 221/502 (44%), Gaps = 77/502 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C L GK LHA +++L Y+++ + LY+KCGC A F+
Sbjct: 296 TYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSL 355
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N S+ VL+ + + G +L LF
Sbjct: 356 RDRNTVSWTVLIGGFLQY-------------------------------GCFSESLELFN 384
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + D F L+ +I+ SN ++CL +QLH L++ G ++NSL++ Y++ G
Sbjct: 385 QMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCG 444
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL----------- 227
L A+ +F M E +D VSW M+ AY Q +A + F M + +
Sbjct: 445 NLQNAESIFSSMEE-RDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYI 503
Query: 228 -------GLDMYT-----------LASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNS 266
GL MY+ + +T F D+ G Q H +K G ++
Sbjct: 504 QHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDT 563
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + +I +Y+KC G + + K+F+ + + DLV WN MI+GYSQ QA+ F +
Sbjct: 564 SVMNAVITMYSKC-GRISEARKIFDFLSRKDLVSWNAMITGYSQ-HGMGKQAIEIFDDML 621
Query: 327 RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKC 382
+ G PD S+V V+S+CS+ + + +K R + +S + +V + ++
Sbjct: 622 KKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLK---RDHNVSPGLEHFSCMVDLLARA 678
Query: 383 GNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
GNL +A+ L D MP T + ++++ HG A + + + + P + ++ +
Sbjct: 679 GNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSG-GYMLL 737
Query: 442 LSACAHTGKVAEGQKYFSMMKD 463
A GK + + +M+D
Sbjct: 738 AKIYADAGKSVDSAQVRKLMRD 759
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
++ +I + +N ++ Y+K G+L DA LF RMP + S N++++GY Q G ++A
Sbjct: 86 LRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDA 145
Query: 420 LRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+ F M + + P TF + +C G + ++ FGF+ + + + ++
Sbjct: 146 MESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTK-FGFQGDPDVATGIV 204
Query: 479 DLLGRAGKLTDAERLIEAM---------PFNPGSIALKAANHFLQLEPS----NAVPYVM 525
D+ R G + A + + G +H L+L S + V + M
Sbjct: 205 DMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNM 264
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + + SG+ E ++ M +RGV+
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRGVR 291
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/642 (38%), Positives = 370/642 (57%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N + Y + + AR++F Q+ + DL+S+NT+IS A G E +L LF D+
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D FT++ ++ A S+ + C+ +Q+H A+ G + V+ +L+ YS+ G ++EA+
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F+ D SWN+M+ + EAL+LF M D T A+ A L
Sbjct: 456 LFHNQDGF-DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLV 514
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L G Q HA +IK FH + + SG++D+Y KC G+M+ KVF +IP PD V W T+I
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC-GEMKSARKVFNQIPSPDDVAWTTVI 573
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG + E +QAL + ++ G PD+ +F ++ ACS L+ GKQIHA +K+
Sbjct: 574 SGCVENGE-EEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNC 632
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ V +LV MY+KCGN+EDA LF RM + N+MI G AQHG EAL F
Sbjct: 633 AFDPF-VMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFN 691
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + P +TF+ VLSAC+H+G ++ K F M+ +G EPE EHYSC++D L RA
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRA 751
Query: 485 GKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLA 527
G + +AE+++ +MPF + + A ++PS++ YV+L+
Sbjct: 752 GHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLS 811
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+ +WE + R +M+ V+K+PGFSWI++K ++H+FVA D SH I+N +E
Sbjct: 812 NIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVE 871
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+ +++K+ GYVP DKE L +HSEKLA+A+GL+ T + V+KNLR
Sbjct: 872 YVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLR 931
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCHNAIK+IS + REI +RD RFH F+ G CSCGDYW
Sbjct: 932 VCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 205/444 (46%), Gaps = 33/444 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF L+ YA+ RI AR LFD++P D+V +N ++ AY + G + L LF
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH 215
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
D ++ ++ ++L + Y L C
Sbjct: 216 RSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYA---------TKLFVC---------- 256
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+ D WN + +Y Q EG EA+ F++M+ ++ D T IL+ S
Sbjct: 257 -------DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L L G Q H +++ G+ Q + + I++Y K +G + ++F ++ + DL+ WNT
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVK-AGSVNYARRMFGQMKEVDLISWNT 368
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS--LGKQIHALTIK 361
+ISG + + + +L F L R G PD + V+ ACS+L S +G+Q+H +K
Sbjct: 369 VISGCA-RSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK 427
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
I + V+ AL+ +YSK G +E+A LF + S N+M+ G+ EALR
Sbjct: 428 AGIVLDSF-VSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALR 486
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF M E ITF + A ++ +G++ +++ M F + S ++D+
Sbjct: 487 LFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKM-RFHYDLFVISGILDMY 545
Query: 482 GRAGKLTDAERLIEAMPFNPGSIA 505
+ G++ A ++ +P +P +A
Sbjct: 546 LKCGEMKSARKVFNQIP-SPDDVA 568
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 225/506 (44%), Gaps = 85/506 (16%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ + DL+ GK HA+ + + + Y++N+ I +Y+KCG L
Sbjct: 19 ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSL-------------- 64
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGD------TESAL 116
SAR+LFD PQ DLV+YN +++AYA G+ T A
Sbjct: 65 -----------------FSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAF 107
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNS 169
+F+ +R+ T TLS L LCL+ + L A+ G V +
Sbjct: 108 HIFRLLRQSVMLTTRHTLSPLF-----KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGA 162
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y++ + EA RV ++ ++D V WN M+ AY + G E L LF L
Sbjct: 163 LVNIYAKFQRIREA-RVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMK 288
D ++ +IL +G G ++ + +R K
Sbjct: 222 DCVSVRTIL-----------------------------MGVGKKTVFERELEQVRAYATK 252
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F D+ +WN +S Y Q E +A+ CF+ + + D +++ ++S ++L+
Sbjct: 253 LFVCDDDSDVTVWNKTLSSYLQAGE-GWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LGKQIH ++ +SV N+ + MY K G++ ARR+F +M E + +S N++I
Sbjct: 312 HLELGKQIHGAVVRFGW-DQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVI 370
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+G A+ G+ +LRLF +L + + P T SVL AC+ + + G
Sbjct: 371 SGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGI 430
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERL 493
+ + +ID+ + GK+ +AE L
Sbjct: 431 VLDSFVSTALIDVYSKGGKMEEAELL 456
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 46/404 (11%)
Query: 1 TFRQVLKTCVG-RRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL+ C G+ +H LK + +++S I +YSK G
Sbjct: 400 TITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGG----------- 448
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
++ A LF DL S+N ++ + + AL LF
Sbjct: 449 --------------------KMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF 488
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI-----KQLHCLAIYCGFDHYASVNNSLLTCY 174
M E+ D T + A+ CL+ KQ+H + I F + V + +L Y
Sbjct: 489 SLMHERGEKADQITFANAAKAAG---CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY 545
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G + A++VF ++ D+V+W +++ ++ E +AL + +M + D YT
Sbjct: 546 LKCGEMKSARKVFNQIPS-PDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTF 604
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A+++ A + L L G Q HA+++K + + + L+D+YAKC G++ D +F +
Sbjct: 605 ATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKC-GNIEDAYGLFRRMN 663
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLG 352
+ LWN MI G +Q +++AL F ++ G PD +F+ V+SACS+ L+
Sbjct: 664 TRSVALWNAMIVGLAQHGN-AEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
K ++ + I + LV S+ G++++A ++ MP
Sbjct: 723 KNFDSMQKTYGVEP-EIEHYSCLVDALSRAGHIQEAEKVVSSMP 765
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 10/215 (4%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SIL + DL+ G + HA ++ SG + + ++ + LI +YAKC G + K+F+ PQ
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC-GSLFSARKLFDITPQ 76
Query: 296 P--DLVLWNTMISGYSQKEEYSD-----QALGCFKKLNRVGYHPDDCSFVCVISACSNL- 347
DLV +N +++ Y+ E D +A F+ L + + + C
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
SPS + + +KI ++ + + V ALV +Y+K + +AR LFDRMP + V N M+
Sbjct: 137 SPSASEALQGYAVKIGLQWD-VFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
Y + G G E L LF + + P ++ ++L
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 159/364 (43%), Gaps = 37/364 (10%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI-KDEVSW 199
+ ++L L K+ H + + G + V N+L+T Y++ G L A+++F + +D V++
Sbjct: 25 ADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTY 84
Query: 200 NSMVVAYGQHRE------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
N+++ AY E EA +F+ + + +TL+ +
Sbjct: 85 NAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEAL 144
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
+ +K G + + L+++YAK +R+ +F+ +P D+VLWN M+ Y +
Sbjct: 145 QGYAVKIGLQWDVFVAGALVNIYAKFQ-RIREARVLFDRMPVRDVVLWNVMMKAYVEMGA 203
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN 373
D+ LG F +R G PD CV + + +GK+ + E+ R
Sbjct: 204 -GDEVLGLFSAFHRSGLRPD-----CV--SVRTILMGVGKKT---VFERELEQVRAY--- 249
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
A +LF + + N ++ Y Q G G EA+ F M+++ +P
Sbjct: 250 --------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPC 295
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
++T++ +LS A + G++ + FG++ + I++ +AG + A R+
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVV-RFGWDQFVSVANSAINMYVKAGSVNYARRM 354
Query: 494 IEAM 497
M
Sbjct: 355 FGQM 358
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 25/253 (9%)
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIA 408
LGK+ HA+ + + +R NN L+ MY+KCG+L AR+LFD P+ + V+ N+++A
Sbjct: 31 LGKRTHAVIVTSGLNPDRYVTNN-LITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILA 89
Query: 409 GYAQHG------IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG--KVAEGQKYFSM 460
YA G EA +F + ++ + T T + C G +E + +++
Sbjct: 90 AYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV 149
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
G + + ++++ + ++ +A L + MP + ++++ +
Sbjct: 150 ---KIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK----QMHVFVAEDGSH 576
V + L + + SG + ++R ++ GV KK F E+++ +FV +D S
Sbjct: 207 V--LGLFSAFHRSGLRPDCVSVRTIL--MGVGKKTVFER-ELEQVRAYATKLFVCDDDSD 261
Query: 577 PMI--KEIHNYLE 587
+ K + +YL+
Sbjct: 262 VTVWNKTLSSYLQ 274
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/713 (37%), Positives = 401/713 (56%), Gaps = 72/713 (10%)
Query: 23 ALYLKNLVPFSAYLS-NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRI 81
AL++ N +P + +S N I Y + + A + F+Q ++FS+NV+L Y R R+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRL 127
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
AR+LFD +P+ D+VS+N+L+S YA G + A +F +M EK + + +GL+ A
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAY 183
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+N + + CL D N L+ + R L +A+ +F +M ++D +SWN+
Sbjct: 184 VHNGRI--EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM-PVRDAISWNT 240
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT------------------- 242
M+ Y Q +A +LF E + D++T ++++ +
Sbjct: 241 MISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 243 --SLEDLVGG------LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S ++ G + L +S +N + +I Y + GD+ K F+ +P
Sbjct: 297 EVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQI-GDIAQARKFFDMMP 355
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
Q D V W +I+GY+Q Y ++AL F ++ + G + +F C +S C++++ LGK
Sbjct: 356 QRDCVSWAAIIAGYAQSGHY-EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIH +K+ + V NAL+AMY KCG++++A F+ + E + VS N+M+AGYA+H
Sbjct: 415 QIHGQAVKMGYGTG-CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G +AL +FE M + P IT V VLSAC+HTG + G +YF M +G P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y+CMIDLLGRAG+L +A+ LI MPF PG+ + KAA ++E
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ YV+L+N+YAASG+W + +R MRD GVQK PG+SW+EV+ ++H F D SH
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSH 653
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSY 624
P + I+ YLEE+ KM++ GYV +KE L +HSEKLAVAFG+L+
Sbjct: 654 PEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPG 713
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI VMKNLR+C DCH+AIK IS I GR I +RD++RFH F +G CSCGDYW
Sbjct: 714 GRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 216/502 (43%), Gaps = 60/502 (11%)
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ + ++ +N ++ + R SA +F+ +P+ VSYN +IS Y A +L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
F M E+ D F+ + ++T N L + D + NSLL+ Y++NG
Sbjct: 103 FDQMPER----DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW--NSLLSGYAQNG 156
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++DEA+ VF M E K+ +SWN ++ AY + EA LF+ + D+ + ++
Sbjct: 157 YVDEAREVFDNMPE-KNSISWNGLLAAYVHNGRIEEACLLFES----KSDWDLISWNCLM 211
Query: 239 TAFTSLEDLVGG-LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
F + L F ++ N+ +I YA+ G + ++F+E P D
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISWNT-----MISGYAQ-GGGLSQARRLFDESPTRD 265
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKL---NRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
+ W M+SGY Q D+A F ++ N V Y+ +V Q
Sbjct: 266 VFTWTAMVSGYVQNGML-DEAKTFFDEMPEKNEVSYNAMIAGYV---------------Q 309
Query: 355 IHALTIKIEIRSN----RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+ I E+ + IS N ++ Y + G++ AR+ FD MP+ + VS ++IAGY
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQ G EAL +F + + TF LS CA + G++ M
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKM------ 423
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
G C + G A + AM F GSI +A + F +E + V + + Y
Sbjct: 424 GYGTGCFV---GNA---------LLAMYFKCGSID-EANDTFEGIEEKDVVSWNTMLAGY 470
Query: 531 AASGKWEEVATIRRLMRDRGVQ 552
A G + T+ M+ GV+
Sbjct: 471 ARHGFGRQALTVFESMKTAGVK 492
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 32/234 (13%)
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
+TG + G +YF M + + P +HY+CMIDLLGR +L + L + +
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGALLGASRIHGNTELGE 835
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
KAA F ++ P N + I + MRD GVQK PG+SW EV+ ++
Sbjct: 836 KAAQMFFKMGPQN--------------------SGISK-MRDVGVQKVPGYSWFEVQNKI 874
Query: 567 HVFVAEDGSHPMIKEIHN--YLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSY 624
H F + +E N +LEE+ KM++ +KE+ L + SE LA A G+L+
Sbjct: 875 HTFSV---GLFLSRERENIGFLEELDLKMRER--EEEKERTLKYLSENLAAALGILTIPV 929
Query: 625 GEPILVMKN-LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G P VMK + +C DC +AIK +S I GR IT+RD++RF+ + CSCG+YW
Sbjct: 930 GRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDSHRFN---ESICSCGEYW 980
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L TC L GK +H +K ++ N + +Y KCG + A+ F
Sbjct: 396 TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI 455
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N +LA YAR A +F+ + +PD ++ ++SA + G +
Sbjct: 456 EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGT 515
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + G+I S + C+I L R
Sbjct: 516 EYFYSMTKD---------YGVIPTSKHYTCMIDLL-----------------------GR 543
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G L+EA+ + M SW +++ A +G G +A ++ +M G MY
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSG--MYV 601
Query: 234 LASILTA 240
L S L A
Sbjct: 602 LLSNLYA 608
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/713 (37%), Positives = 401/713 (56%), Gaps = 72/713 (10%)
Query: 23 ALYLKNLVPFSAYLS-NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRI 81
AL++ N +P + +S N I Y + + A + F+Q ++FS+NV+L Y R R+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRL 127
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
AR+LFD +P+ D+VS+N+L+S YA G + A +F +M EK + + +GL+ A
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAY 183
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+N + + CL D N L+ + R L +A+ +F +M ++D +SWN+
Sbjct: 184 VHNGRI--EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM-PVRDAISWNT 240
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT------------------- 242
M+ Y Q +A +LF E + D++T ++++ +
Sbjct: 241 MISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 243 --SLEDLVGG------LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S ++ G + L +S +N + +I Y + GD+ K F+ +P
Sbjct: 297 EVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQI-GDIAQARKFFDMMP 355
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
Q D V W +I+GY+Q Y ++AL F ++ + G + +F C +S C++++ LGK
Sbjct: 356 QRDCVSWAAIIAGYAQSGHY-EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIH +K+ + V NAL+AMY KCG++++A F+ + E + VS N+M+AGYA+H
Sbjct: 415 QIHGQAVKMGYGTG-CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G +AL +FE M + P IT V VLSAC+HTG + G +YF M +G P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y+CMIDLLGRAG+L +A+ LI MPF PG+ + KAA ++E
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ YV+L+N+YAASG+W + +R MRD GVQK PG+SW+EV+ ++H F D SH
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSH 653
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSY 624
P + I+ YLEE+ KM++ GYV +KE L +HSEKLAVAFG+L+
Sbjct: 654 PEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPG 713
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI VMKNLR+C DCH+AIK IS I GR I +RD++RFH F +G CSCGDYW
Sbjct: 714 GRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 216/502 (43%), Gaps = 60/502 (11%)
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ + ++ +N ++ + R SA +F+ +P+ VSYN +IS Y A +L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
F M E+ D F+ + ++T N L + D + NSLL+ Y++NG
Sbjct: 103 FDQMPER----DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW--NSLLSGYAQNG 156
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++DEA+ VF M E K+ +SWN ++ AY + EA LF+ + D+ + ++
Sbjct: 157 YVDEAREVFDNMPE-KNSISWNGLLAAYVHNGRIEEACLLFES----KSDWDLISWNCLM 211
Query: 239 TAFTSLEDLVGG-LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
F + L F ++ N+ +I YA+ G + ++F+E P D
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISWNT-----MISGYAQ-GGGLSQARRLFDESPTRD 265
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKL---NRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
+ W M+SGY Q D+A F ++ N V Y+ +V Q
Sbjct: 266 VFTWTAMVSGYVQNGML-DEAKTFFDEMPEKNEVSYNAMIAGYV---------------Q 309
Query: 355 IHALTIKIEIRSN----RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+ I E+ + IS N ++ Y + G++ AR+ FD MP+ + VS ++IAGY
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQ G EAL +F + + TF LS CA + G++ M
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKM------ 423
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
G C + G A + AM F GSI +A + F +E + V + + Y
Sbjct: 424 GYGTGCFV---GNA---------LLAMYFKCGSID-EANDTFEGIEEKDVVSWNTMLAGY 470
Query: 531 AASGKWEEVATIRRLMRDRGVQ 552
A G + T+ M+ GV+
Sbjct: 471 ARHGFGRQALTVFESMKTAGVK 492
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L TC L GK +H +K ++ N + +Y KCG + A+ F
Sbjct: 396 TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI 455
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N +LA YAR A +F+ + +PD ++ ++SA + G +
Sbjct: 456 EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGT 515
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + G+I S + C+I L R
Sbjct: 516 EYFYSMTKD---------YGVIPTSKHYTCMIDLL-----------------------GR 543
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G L+EA+ + M SW +++ A +G G +A ++ +M G MY
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSG--MYV 601
Query: 234 LASILTA 240
L S L A
Sbjct: 602 LLSNLYA 608
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/710 (36%), Positives = 388/710 (54%), Gaps = 72/710 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L+ C L GK +HA + Y+ + +Y+KCG +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSME---------- 364
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A ++FD + ++VS+ +I+ +A G + A F
Sbjct: 365 ---------------------DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M E + + T ++ A S+ L + Q+ I G+ V +LL+ Y++ G
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGS 463
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L +A RVF ++ + ++ V+WN+M+ AY QH + AL FQ ++ + + T SIL
Sbjct: 464 LKDAHRVFEKISK-QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
S + L G H ++K+G + H+ + L+ ++ C GD+ +F ++P+ DLV
Sbjct: 523 VCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC-GDLMSAKNLFNDMPKRDLV 581
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP---SLGKQIH 356
WNT+I+G+ Q + + A FK + G PD +F +++AC+ SP + G+++H
Sbjct: 582 SWNTIIAGFVQHGK-NQVAFDYFKMMQESGIKPDKITFTGLLNACA--SPEALTEGRRLH 638
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
AL + + + V L++MY+KCG++EDA ++F ++P+ N S SMIAGYAQHG G
Sbjct: 639 ALITEAAFDCD-VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRG 697
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL LF M + + P ITFV LSACAH G + EG +F MK+ F EP EHY C
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGC 756
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
M+DL GRAG L +A I M P S +A KAA L+L+P++
Sbjct: 757 MVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPND 816
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+V+L+NIYAA+G W+EVA +R++M DRGV KKPG SWIEV ++H F ++D +HP
Sbjct: 817 NGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQT 876
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
+EIH LE + +M+Q GYVPD KE+ L +HSE+LA+ +GLL T P
Sbjct: 877 EEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTP 936
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I++ KNLR+CGDCH A KFIS I R+I RD+ RFH FKDG CSCGD+W
Sbjct: 937 IVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 249/506 (49%), Gaps = 49/506 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C+ ++L G+ ++ K+ V ++ N I +Y+KCG +A F+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ +V+S+N+LL Y + A +L +Q+ Q PD ++ ++++A AD + +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L+ + + +DTD F V +L+ + +
Sbjct: 232 ELYNLILKAGWDTDLF---------------------------------VGTALINMHIK 258
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + +A +VF + +D V+W SM+ +H +A LFQ M + D S
Sbjct: 259 CGDIGDATKVFDNL-PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A E L G + HA + + G+ ++G+ ++ +Y KC G M D ++VF+ +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC-GSMEDALEVFDLVKGR 376
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL---GK 353
++V W MI+G++Q D+A F K+ G P+ +F+ ++ ACS SPS G+
Sbjct: 377 NVVSWTAMIAGFAQHGRI-DEAFLFFNKMIESGIEPNRVTFMSILGACS--SPSALKRGQ 433
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QI I+ S+ V AL++MY+KCG+L+DA R+F+++ + N V+ N+MI Y QH
Sbjct: 434 QIQDHIIEAGYGSDD-RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGE 472
AL F+ +L+ I P + TF S+L+ C + + G+ +F +MK G E +
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLH 550
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + G L A+ L MP
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMP 576
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 168/301 (55%), Gaps = 5/301 (1%)
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+IKD N+++ + + EA+Q+ + + S + + T +++L ++L G
Sbjct: 70 ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
+ + H+ KSG + + + LI++YAKC G+ ++F+++ + D+ WN ++ GY Q
Sbjct: 130 ERIYNHIKKSGVQPDIFMRNTLINMYAKC-GNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRI 369
Y ++A +++ + PD +FV +++AC++ + G++++ L +K ++ +
Sbjct: 189 HGLY-EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD-L 246
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V AL+ M+ KCG++ DA ++FD +P + V+ SMI G A+HG +A LF+ M E
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P + FVS+L AC H + +G+K + MK++ G++ E + ++ + + G + D
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMED 365
Query: 490 A 490
A
Sbjct: 366 A 366
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 60/320 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +H L +K + ++SN + ++ CG L +A + FN
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFN-- 573
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P+ DLVS+NT+I+ + G + A FK
Sbjct: 574 -----------------------------DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E D T +GL+ A ++ L ++LH L FD V L++ Y++ G
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A +VF+++ + K+ SW SM+ Y QH G EAL+LF +M + D T L
Sbjct: 665 SIEDAHQVFHKLPK-KNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGAL 723
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH------------QNSHIGSGLIDLYAKCSGDMRDC 286
+A HA LI+ G H + H G ++DL+ + +G + +
Sbjct: 724 SACA-----------HAGLIEEGLHHFQSMKEFNIEPRMEHYGC-MVDLFGR-AGLLNEA 770
Query: 287 MKVFEEIP-QPDLVLWNTMI 305
++ ++ +PD +W ++
Sbjct: 771 VEFIIKMQVEPDSRVWGALL 790
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 19/184 (10%)
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
I + N L+ MY+KCGN A+++FD M E + S N ++ GY QHG+ EA +L E M++
Sbjct: 145 IFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQ 204
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
++ P TFVS+L+ACA V +G++ ++++ G++ + + +I++ + G +
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVGTALINMHIKCGDIG 263
Query: 489 DAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
DA ++ + +P + V + + A G++++ + + M +
Sbjct: 264 DATKVFDNLP------------------TRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 549 RGVQ 552
GVQ
Sbjct: 306 EGVQ 309
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/710 (38%), Positives = 388/710 (54%), Gaps = 69/710 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G RDL G+ +HA+ ++ Y K
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTG--------------YDK--------------- 235
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+VF+ N L+ Y++ I A +F ++P+ D+VS+N IS G + AL L
Sbjct: 236 --DVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 122 MREKRFDTDGFTLSGLI----TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+ + FTLS ++ A + L +Q+H I D + +L+ Y++
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKY 353
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LD+A++VF E KD + WN+++ E+L LF M ++ TLA++
Sbjct: 354 GLLDDARKVF-EWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAV 412
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + SLE + Q HA K GF +SH+ +GLID Y KC+ +R KVFEE +
Sbjct: 413 LKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNC-LRYANKVFEEHSSDN 471
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
++ + +MI+ SQ + + + A+ F ++ R G PD +++AC++LS GKQ+H
Sbjct: 472 IIAFTSMITALSQCD-HGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 530
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A IK + ++ + NALV Y+KCG++EDA F +P+ VS ++MI G AQHG G
Sbjct: 531 AHLIKRKFMTD-VFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHG 589
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
AL +F M++ I P +IT SVL AC H G V E + YFS MK+MFG + EHYSC
Sbjct: 590 KRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSC 649
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
MIDLLGRAGKL DA L+ +MPF + + AA LEP
Sbjct: 650 MIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEK 709
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ +V+LAN YA++G W+EVA +R+LM+D V+K+P SW+E+K ++H F+ D SHP
Sbjct: 710 SGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRA 769
Query: 580 KEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEP 627
++I+ LEE+ M +AGYVP +KE L HHSE+LAVAF L+ST G P
Sbjct: 770 RDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAP 829
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLRIC DCH A KFIS I REI +RD RFH F DG CSCGDYW
Sbjct: 830 IRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 224/430 (52%), Gaps = 8/430 (1%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL+ Y++ SAR++FD+ P P VS+++L++AY++ AL+ F+ MR +
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ F L ++ + + L Q+H +A+ G V N+L+ Y GF+DEA+RVF
Sbjct: 101 CNEFALP-IVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFD 159
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
E ++ VSWN M+ A+ ++ +A++LF EMV + + + + ++ A T DL
Sbjct: 160 EAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLE 219
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G + HA ++++G+ ++ + L+D+Y+K GD+ VF ++P+ D+V WN ISG
Sbjct: 220 AGRKVHAMVVRTGYDKDVFTANALVDMYSKL-GDIHMAALVFGKVPKTDVVSWNAFISG- 277
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS---ACSNLSPSLGKQIHALTIKIEIR 365
+ AL ++ G P+ + ++ + +LG+QIH IK
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACAD 337
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + ALV MY+K G L+DAR++F+ +P + + N++I+G + G E+L LF
Sbjct: 338 SDDY-IGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCR 396
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + T +VL + A +++ + ++ + + GF + + +ID +
Sbjct: 397 MRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKI-GFLSDSHVVNGLIDSYWKCN 455
Query: 486 KLTDAERLIE 495
L A ++ E
Sbjct: 456 CLRYANKVFE 465
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 131/312 (41%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK+ + +HAL K +++ N I Y KC CL A+ F +
Sbjct: 408 TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH 467
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ +F ++I+A + C E A+ LF
Sbjct: 468 SSDNIIAF-------------------------------TSMITALSQCDHGEDAIKLFM 496
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K + D F LS L+ AS + KQ+H I F N+L+ Y++ G
Sbjct: 497 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCG 556
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A F + + K VSW++M+ QH G AL +F+ MV ++ + TL S+L
Sbjct: 557 SIEDADLAFSGLPD-KGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL 615
Query: 239 TA--FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A L D G F + G + S +IDL + +G + D M++ +P +
Sbjct: 616 CACNHAGLVDEAKGY-FSSMKEMFGIDRTEEHYSCMIDLLGR-AGKLDDAMELVNSMPFE 673
Query: 296 PDLVLWNTMISG 307
+ +W +++
Sbjct: 674 ANAAVWGALLAA 685
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/689 (37%), Positives = 394/689 (57%), Gaps = 59/689 (8%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
++ +CG + A F + + +F N +LA Y + + A +LFD +P+ D+VS+N +
Sbjct: 202 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 261
Query: 103 ISAYADCGDTESALSLFKDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAI--YC 158
+SA + G AL + DM+ K R D+ +T S A ++L KQLH I
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 321
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
D Y V ++L+ Y+++G EAK VF + + ++ V+W ++ + Q+ E+++L
Sbjct: 322 HIDPY--VASALVELYAKSGCFKEAKGVFNSLHD-RNNVAWTVLISGFLQYGCFTESVEL 378
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F +M + + LD + LA++++ S DL G Q H+ +KSG Q + + LI +YAK
Sbjct: 379 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 438
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ------KEEYSD-----------QALGC 321
C +++ +F + + D+V W +MI+ YSQ E+ D LG
Sbjct: 439 CD-NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 497
Query: 322 FKK--------------LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRS 366
+ + L+ PD ++V + C++L + LG QI T+K+ +
Sbjct: 498 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 557
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ SV NA++ MYSKCG + +AR++FD + + VS N+MI GY+QHG+G +A+ +F+ +
Sbjct: 558 D-TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDI 616
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
L+ P I++V+VLS C+H+G V EG+ YF MMK P EH+SCM+DLLGRAG
Sbjct: 617 LKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGH 676
Query: 487 LTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANI 529
LT+A+ LI+ MP P + +A AA H +L+ ++ Y+++A I
Sbjct: 677 LTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKI 736
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
YA +GK ++ A IR+LMRD+G++K PG+SW+EV ++HVF A+D SHP + I L+E+
Sbjct: 737 YADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDEL 796
Query: 590 SRKMKQAGYV-PDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
K+ + GYV D + +HHSEKLAVAFGL++ PI +MKNLRICGDCH IK IS
Sbjct: 797 MEKIARLGYVRTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLIS 856
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ GRE +RD RFH F G CSCGDYW
Sbjct: 857 TVTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 152/562 (27%), Positives = 253/562 (45%), Gaps = 73/562 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF-NQT 60
F L++C R L ++LH + + + +L N + Y CG LS A
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H NV + NV+L YA+ R++ A +LF ++P D+ S+NTL+S Y +L F
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146
Query: 121 DM-REKRFDTDGFTLS---------GLITASSNNLCLIKQLHC------------LAIYC 158
M R + FTL+ G + + L ++++ + + C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206
Query: 159 GFDHYAS------------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
G AS NS+L Y + +D A +F M E +D VSWN MV A
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPE-RDVVSWNMMVSAL 265
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q EAL + +M S + LD T S LTA L L G Q HA +I++ H +
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
++ S L++LYAK SG ++ VF + + V W +ISG+ Q ++ +++ F ++
Sbjct: 326 YVASALVELYAK-SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFT-ESVELFNQMR 383
Query: 327 RVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC--- 382
D + +IS C S + LG+Q+H+L +K + + V+N+L++MY+KC
Sbjct: 384 AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLK-SGQIQAVVVSNSLISMYAKCDNL 442
Query: 383 ----------------------------GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
GN+ AR FD M E N ++ N+M+ Y QHG
Sbjct: 443 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHG 502
Query: 415 IGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
+ LR+++ ML E + P +T+V++ CA G G + + G +
Sbjct: 503 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLIIDTSV 561
Query: 474 YSCMIDLLGRAGKLTDAERLIE 495
+ +I + + G++ +A ++ +
Sbjct: 562 ANAVITMYSKCGRILEARKVFD 583
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 215/502 (42%), Gaps = 77/502 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C L GK LHA ++NL Y+++ + LY+K GC A FN
Sbjct: 292 TYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSL 351
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N NV ++ LIS + G ++ LF
Sbjct: 352 HDRN----NV---------------------------AWTVLISGFLQYGCFTESVELFN 380
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + D F L+ LI+ S +LCL +QLH L + G V+NSL++ Y++
Sbjct: 381 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 440
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL----------- 227
L A+ +F M E KD VSW SM+ AY Q +A + F M +
Sbjct: 441 NLQSAEAIFRFMNE-KDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYI 499
Query: 228 -------GLDMYTL-----------ASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNS 266
GL MY + + +T F DL G Q +K G ++
Sbjct: 500 QHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDT 559
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + +I +Y+KC G + + KVF+ + D+V WN MI+GYSQ QA+ F +
Sbjct: 560 SVANAVITMYSKC-GRILEARKVFDFLNVKDIVSWNAMITGYSQ-HGMGKQAIEIFDDIL 617
Query: 327 RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKC 382
+ G PD S+V V+S CS+ + + +K R++ IS + +V + +
Sbjct: 618 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMK---RAHNISPGLEHFSCMVDLLGRA 674
Query: 383 GNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
G+L +A+ L D MP T + ++++ HG A + + E + P + +++ +
Sbjct: 675 GHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSG-SYMLM 733
Query: 442 LSACAHTGKVAEGQKYFSMMKD 463
A GK + + +M+D
Sbjct: 734 AKIYADAGKSDDSAQIRKLMRD 755
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/647 (37%), Positives = 380/647 (58%), Gaps = 37/647 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ N L+ AY + + A QLF + D V++N+L++ Y++ G E A+ LF ++
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
FT + L++A+ ++ +Q+H + F V N+LL YS++ +D
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
E ++FYEM E+ D +S+N ++ +Y + + E+ LF+++ + + A++L+
Sbjct: 294 EVGKLFYEMPEL-DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA 352
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
TS +L G Q H I G + S + + L+D+YAKC+GD ++ K+F+ I V W
Sbjct: 353 TSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGD-KEAQKIFDNIACKSTVPW 411
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
MIS Y QK ++ ++ + F + R G D +F ++ AC+NL S SLG+Q+H+L I
Sbjct: 412 TAMISAYVQKGKH-EEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLI 470
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ SN S +AL+ Y+KCG + DA + F MPE N+VS N++I+ YAQ+G L
Sbjct: 471 RSGFMSNVYS-GSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTL 529
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
F+ M+++ P +++F+SVLSAC+H G V E +F+ M ++ P+ EHY+ M+D+
Sbjct: 530 NSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDV 589
Query: 481 LGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP-SNAVP 522
L R G+ +AE+L+ MPF P I A KAA+ +E +A P
Sbjct: 590 LCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAP 649
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
Y+ ++NIYA +G+W+ VA +++ MRDRGV+K P +SW+E+K Q HVF A D SHP +K+I
Sbjct: 650 YINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKI 709
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ +S++M++ GY PD K + L +HSE+ A+AF L++T G PI+V
Sbjct: 710 LRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVV 769
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
MKNLR C DCH AIK IS I REI VRD+ RFH FKDG CSCGDYW
Sbjct: 770 MKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 238/458 (51%), Gaps = 16/458 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L AH F+Q N S N++++ + + +++ AR+LFD + + VS+ LI Y
Sbjct: 57 GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHY 163
++ A L+ DMR + D TL L++ + N +I Q+H I G+++
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKN--VIVQIHTHVIKLGYEYN 174
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V NSL+ Y + L A ++F M KD V++NS++ Y EA++LF E+
Sbjct: 175 LMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ + +T A++L+A L+D G Q H ++K+ F N +G+ L+D Y+K +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK-HDQV 292
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS- 342
+ K+F E+P+ D + +N +I+ Y+ ++ ++ F+KL + F ++S
Sbjct: 293 DEVGKLFYEMPELDGISYNVVITSYAWNGQFK-ESFDLFRKLQFTRFDRRQFPFATLLSI 351
Query: 343 ACSNLSPSLGKQIH--ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
A S+L+ +G+QIH A+T+ S V NALV MY+KC ++A+++FD + +T
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESR---VENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
V +MI+ Y Q G E + +F M T +P TF S+L ACA+ ++ G++ S+
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ GF S ++D + G +TDA + MP
Sbjct: 469 LIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 41/311 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L +L G+ +H + F + + N + +Y+KC
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG------------ 392
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A+++FD I V + +ISAY G E +++F D
Sbjct: 393 -------------------DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR D T + ++ A +N ++ L +QLH L I GF ++LL Y++ G
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGC 493
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A + F EM E ++ VSWN+++ AY Q+ L FQ+M+ D + S+L+
Sbjct: 494 MTDAIKSFGEMPE-RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + V +H + + + + H S ++D+ + +G + K+ E+P +
Sbjct: 553 ACSHC-GFVEEALWHFNSMTQIYEVTPKREHYTS-MVDVLCR-NGRFDEAEKLMTEMPFE 609
Query: 296 PDLVLWNTMIS 306
P ++W+++++
Sbjct: 610 PSEIMWSSVLN 620
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L+ C + G+ LH+L +++ + Y + + Y+KCGC++ A +F +
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM 504
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N S+N L++AYA+ + F Q+ Q PD VS+ +++SA + CG E AL
Sbjct: 505 PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + + +HY S+ + L R
Sbjct: 565 WHFNSMTQ----------------------------IYEVTPKREHYTSMVDVL----CR 592
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
NG DEA+++ EM E+ W+S++
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVL 619
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/689 (37%), Positives = 394/689 (57%), Gaps = 59/689 (8%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
++ +CG + A F + + +F N +LA Y + + A +LFD +P+ D+VS+N +
Sbjct: 182 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 241
Query: 103 ISAYADCGDTESALSLFKDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAI--YC 158
+SA + G AL + DM+ K R D+ +T S A ++L KQLH I
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
D Y V ++L+ Y+++G EAK VF + + ++ V+W ++ + Q+ E+++L
Sbjct: 302 HIDPY--VASALVELYAKSGCFKEAKGVFNSLHD-RNNVAWTVLISGFLQYGCFTESVEL 358
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F +M + + LD + LA++++ S DL G Q H+ +KSG Q + + LI +YAK
Sbjct: 359 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 418
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ------KEEYSD-----------QALGC 321
C +++ +F + + D+V W +MI+ YSQ E+ D LG
Sbjct: 419 CD-NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 477
Query: 322 FKK--------------LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRS 366
+ + L+ PD ++V + C++L + LG QI T+K+ +
Sbjct: 478 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 537
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ SV NA++ MYSKCG + +AR++FD + + VS N+MI GY+QHG+G +A+ +F+ +
Sbjct: 538 D-TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDI 596
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
L+ P I++V+VLS C+H+G V EG+ YF MMK P EH+SCM+DLLGRAG
Sbjct: 597 LKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGH 656
Query: 487 LTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANI 529
LT+A+ LI+ MP P + +A AA H +L+ ++ Y+++A I
Sbjct: 657 LTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKI 716
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
YA +GK ++ A IR+LMRD+G++K PG+SW+EV ++HVF A+D SHP + I L+E+
Sbjct: 717 YADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDEL 776
Query: 590 SRKMKQAGYV-PDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
K+ + GYV D + +HHSEKLAVAFGL++ PI +MKNLRICGDCH IK IS
Sbjct: 777 MEKIARLGYVRTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLIS 836
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ GRE +RD RFH F G CSCGDYW
Sbjct: 837 TVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 152/562 (27%), Positives = 253/562 (45%), Gaps = 73/562 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF-NQT 60
F L++C R L ++LH + + + +L N + Y CG LS A
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H NV + NV+L YA+ R++ A +LF ++P D+ S+NTL+S Y +L F
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126
Query: 121 DM-REKRFDTDGFTLS---------GLITASSNNLCLIKQLHC------------LAIYC 158
M R + FTL+ G + + L ++++ + + C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186
Query: 159 GFDHYAS------------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
G AS NS+L Y + +D A +F M E +D VSWN MV A
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPE-RDVVSWNMMVSAL 245
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q EAL + +M S + LD T S LTA L L G Q HA +I++ H +
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
++ S L++LYAK SG ++ VF + + V W +ISG+ Q ++ +++ F ++
Sbjct: 306 YVASALVELYAK-SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFT-ESVELFNQMR 363
Query: 327 RVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC--- 382
D + +IS C S + LG+Q+H+L +K + + V+N+L++MY+KC
Sbjct: 364 AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLK-SGQIQAVVVSNSLISMYAKCDNL 422
Query: 383 ----------------------------GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
GN+ AR FD M E N ++ N+M+ Y QHG
Sbjct: 423 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHG 482
Query: 415 IGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
+ LR+++ ML E + P +T+V++ CA G G + + G +
Sbjct: 483 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLIIDTSV 541
Query: 474 YSCMIDLLGRAGKLTDAERLIE 495
+ +I + + G++ +A ++ +
Sbjct: 542 ANAVITMYSKCGRILEARKVFD 563
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 215/502 (42%), Gaps = 77/502 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C L GK LHA ++NL Y+++ + LY+K GC A FN
Sbjct: 272 TYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSL 331
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N NV ++ LIS + G ++ LF
Sbjct: 332 HDRN----NV---------------------------AWTVLISGFLQYGCFTESVELFN 360
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + D F L+ LI+ S +LCL +QLH L + G V+NSL++ Y++
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL----------- 227
L A+ +F M E KD VSW SM+ AY Q +A + F M +
Sbjct: 421 NLQSAEAIFRFMNE-KDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYI 479
Query: 228 -------GLDMYTL-----------ASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNS 266
GL MY + + +T F DL G Q +K G ++
Sbjct: 480 QHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDT 539
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + +I +Y+KC G + + KVF+ + D+V WN MI+GYSQ QA+ F +
Sbjct: 540 SVANAVITMYSKC-GRILEARKVFDFLNVKDIVSWNAMITGYSQ-HGMGKQAIEIFDDIL 597
Query: 327 RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKC 382
+ G PD S+V V+S CS+ + + +K R++ IS + +V + +
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMK---RAHNISPGLEHFSCMVDLLGRA 654
Query: 383 GNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
G+L +A+ L D MP T + ++++ HG A + + E + P + +++ +
Sbjct: 655 GHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSG-SYMLM 713
Query: 442 LSACAHTGKVAEGQKYFSMMKD 463
A GK + + +M+D
Sbjct: 714 AKIYADAGKSDDSAQIRKLMRD 735
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/642 (38%), Positives = 377/642 (58%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL +Y + + A QLF+ IP+ D V++N L++ Y+ G A++LF M+E +
Sbjct: 237 NSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYR 296
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + ++TA +++ +Q+H + C F V N+LL YS++ + EA ++
Sbjct: 297 PTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKL 356
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
FYEM E+ D +S+N +V Y + E+L+LF+E+ + A++L+ +
Sbjct: 357 FYEMPEV-DGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLN 415
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H+ I + +G+ L+D+YAKC G+ + ++F ++ V W MIS
Sbjct: 416 LDIGRQIHSQTIVTDAISEILVGNSLVDMYAKC-GEFGEANRIFSDLAIQSSVPWTAMIS 474
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIR 365
Y QK + D L F ++ R D ++ ++ AC++L S +LGKQ+H+ I
Sbjct: 475 SYVQKGLHED-GLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYI 533
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
SN S +ALV MY+KCG+++DA ++F MP N+VS N++I+ YAQ+G G LRLFE
Sbjct: 534 SNVFS-GSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEE 592
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M+ + + P +++ +S+L AC+H G V EG +YF M ++ P+ EHY+ ID+L R G
Sbjct: 593 MVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGG 652
Query: 486 KLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP-SNAVPYVMLA 527
+ +AE+L+ MPF P I A KAAN ++ +A PYV ++
Sbjct: 653 RFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMS 712
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+G+W+ V +++ MR+RGV+K P +SW+E+K + HVF A D +HP ++EI L+
Sbjct: 713 NIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLD 772
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
E+ KM + GY PD K + L +HSE++A+AF L+ST G PILVMKNLR
Sbjct: 773 ELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLR 832
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH AIK IS I REITVRD+ RFH F+DG C+C DYW
Sbjct: 833 ACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 258/504 (51%), Gaps = 17/504 (3%)
Query: 5 VLKTCVGRRDLVTGKS-----LH--ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF 57
++K C R+LVT + LH A +K + Y SN + + + G L+ A F
Sbjct: 67 IIKPCT--RNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLF 124
Query: 58 NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
++ H N+FS N ++ Y + ++ AR LFD + Q V++ LI YA A
Sbjct: 125 DEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFG 184
Query: 118 LFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
LF +M D D +L+ L++ + +++ ++Q+H I G+D V+NSLL Y
Sbjct: 185 LFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYC 244
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ L A ++F ++ E +D V++N+++ Y + EA+ LF +M + +T A
Sbjct: 245 KTRSLGLAFQLFNDIPE-RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFA 303
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+ILTA L+D+ G Q H ++K F N + + L+D Y+K + + K+F E+P+
Sbjct: 304 AILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSK-HDRVVEASKLFYEMPE 362
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS-ACSNLSPSLGKQ 354
D + +N +++ Y+ ++L FK+L G+ + F ++S A +L+ +G+Q
Sbjct: 363 VDGISYNVLVTCYAWNGRVK-ESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQ 421
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH+ TI + S I V N+LV MY+KCG +A R+F + ++V +MI+ Y Q G
Sbjct: 422 IHSQTIVTDAIS-EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKG 480
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ + L+LF M I T+ S++ ACA + G++ S + G+
Sbjct: 481 LHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS-GYISNVFSG 539
Query: 475 SCMIDLLGRAGKLTDAERLIEAMP 498
S ++D+ + G + DA ++ + MP
Sbjct: 540 SALVDMYAKCGSIKDALQMFQEMP 563
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 54/266 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +++ C L GK LH+ + S Y+SN
Sbjct: 503 TYASIVRACASLASLTLGKQLHSHIIG-----SGYISN---------------------- 535
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
VFS + L+ YA+ I A Q+F ++P + VS+N LISAYA GD + L LF+
Sbjct: 536 ----VFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFE 591
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN------------ 168
+M D +L ++ A S HC + G ++ S+
Sbjct: 592 EMVRSGLQPDSVSLLSILCACS---------HCGLVEEGLQYFDSMTRIYKLVPKKEHYA 642
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
S + R G DEA+++ +M DE+ W+S++ + G H+ A + ++ ++++
Sbjct: 643 STIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVL 702
Query: 229 LDM--YTLASILTAFTSLEDLVGGLQ 252
D Y S + A D VG ++
Sbjct: 703 RDAAPYVTMSNIYAAAGEWDNVGKVK 728
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/760 (35%), Positives = 397/760 (52%), Gaps = 104/760 (13%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C GK LH L LK Y+ N + LYS+ G LS+A F+ +
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISA--------------- 105
S+N L++ A+Q I A LF ++ +PD V+ +L+SA
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 106 --------------------YADCGDTESA----------------LSLFKDMREKRFDT 129
Y C D ++A +F M+ +
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVP 436
Query: 130 DGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
+ FT ++ + L +Q+H + GF V++ L+ Y+++G LD A ++F
Sbjct: 437 NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF 496
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ E D VSW +M+ Y QH + EAL LF+EM + D AS ++A ++ L
Sbjct: 497 RRLKE-NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQAL 555
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q HA SG+ + IG+ L+ LYA+C G +R+ F++I D V WN+++SG
Sbjct: 556 DQGRQIHAQSCLSGYSDDLSIGNALVSLYARC-GKVREAYAAFDQIYAKDNVSWNSLVSG 614
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS 366
++Q Y ++AL F ++N+ G + +F +SA +N++ +GKQIH + K S
Sbjct: 615 FAQ-SGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDS 673
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
V+NAL+ +Y+KCG ++D +S NSMI GY+QHG G EAL+LFE M
Sbjct: 674 -ETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDM 719
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ ++ P ++TFV VLSAC+H G V EG YF M + P+ EHY+C++DLLGR+G
Sbjct: 720 KQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGL 779
Query: 487 LTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANI 529
L+ A+R +E MP P ++ + AA+H L+LEP ++ YV+++N+
Sbjct: 780 LSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNM 839
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
YA SGKW+ R++M+DRGV+K+PG SW+EV +H F A D +HP I+ YL +
Sbjct: 840 YAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGL 899
Query: 590 SRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
+ + GYVP K+ + HSE+LA+AFGLLS + P+ V KNLR+C
Sbjct: 900 DFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVC 959
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCHN IK +S I R I VRD+YRFH FK G CSC DYW
Sbjct: 960 EDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 248/524 (47%), Gaps = 62/524 (11%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++ F N L+ Y + ++SA+++F+ + D VS+ +IS + G E A+ LF +
Sbjct: 197 SSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI 256
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
F G KQLH L + GF V N+L+T YSR+G L
Sbjct: 257 VLSACTKVEFFEFG------------KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSS 304
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+++F+ M + +D VS+NS++ Q AL LF++M D T+AS+L+A
Sbjct: 305 AEQIFHCMSQ-RDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACA 363
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
S+ L G QFH++ IK+G + + L+DLY KCS D++ + F Q D +
Sbjct: 364 SVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCS-DIKTAHEFFLCYGQLDNL--- 419
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIK 361
+++ F ++ G P+ ++ ++ C+ L + LG+QIH +K
Sbjct: 420 -------------NKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLK 466
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ N + V++ L+ MY+K G L+ A ++F R+ E++ VS +MIAGY QH EAL
Sbjct: 467 TGFQFN-VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALN 525
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF+ M + I NI F S +SACA + +G++ + + G+ + + ++ L
Sbjct: 526 LFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHA-QSCLSGYSDDLSIGNALVSLY 584
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
R GK+ +A AA F Q+ + V + L + +A SG +EE
Sbjct: 585 ARCGKVREA----------------YAA--FDQIYAKDNVSWNSLVSGFAQSGYFEEALN 626
Query: 542 IRRLMRDRG-----------VQKKPGFSWIEVKKQMHVFVAEDG 574
I M G V + + + KQ+H + + G
Sbjct: 627 IFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTG 670
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 220/474 (46%), Gaps = 58/474 (12%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +FD++P L +N + + + LF+ M K + D + ++ S
Sbjct: 116 AVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSG 175
Query: 144 NLC---LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
N ++Q+H I GF+ + N L+ Y +NGFL AK+VF + + +D VSW
Sbjct: 176 NAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL-KARDSVSWV 234
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Q+ EA+ LF ++V L+A T +E G Q H ++K
Sbjct: 235 AMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEFFEFGKQLHGLVLKQ 280
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
GF +++ + L+ LY++ SG++ ++F + Q D V +N++ISG +Q + Y ++AL
Sbjct: 281 GFSSETYVCNALVTLYSR-SGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ-QGYINRALA 338
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLS--PSLGKQIHALTIKIEIRSNRISVNNALVAM 378
FKK+N PD + ++SAC+++ P+ GKQ H+ IK + S+ I V +L+ +
Sbjct: 339 LFKKMNLDCQKPDCVTVASLLSACASVGALPN-GKQFHSYAIKAGMTSD-IVVEGSLLDL 396
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KC +++ A F Y Q ++ ++F M I P T+
Sbjct: 397 YVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTY 441
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
S+L C G G++ + + GF+ S +ID+ + GKL A ++
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHALKI----- 495
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
F +L+ ++ V + + Y K+ E + + M+D+G++
Sbjct: 496 -------------FRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIK 536
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 146/298 (48%), Gaps = 32/298 (10%)
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y G L+ A VF EM I+ WN + + R LF+ M++ +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEM-PIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161
Query: 230 DMYTLASIL-------TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
D A +L +F +E Q HA I SGF ++ I + LIDLY K +G
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVE------QIHAKTITSGFESSTFICNPLIDLYFK-NGF 214
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ KVFE + D V W MISG SQ Y ++A+ F ++ V+S
Sbjct: 215 LSSAKKVFENLKARDSVSWVAMISGLSQNG-YEEEAMLLFCQI--------------VLS 259
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
AC+ + GKQ+H L +K + S+ V NALV +YS+ GNL A ++F M + + V
Sbjct: 260 ACTKVEFFEFGKQLHGLVLK-QGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV 318
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
S NS+I+G AQ G AL LF+ M P +T S+LSACA G + G+++ S
Sbjct: 319 SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 49/214 (22%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + ++ GK +H + K +SN I LY+KCG +
Sbjct: 642 TFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI---------- 691
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ S+N ++ Y++ A +LF+ + Q P+ V++ ++SA + G + +
Sbjct: 692 ---DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGI 748
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F+ M E ++NL + HYA V + L R
Sbjct: 749 SYFRSMSE-----------------AHNLVPKPE-----------HYACVVDLL----GR 776
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+G L AKR EM D + W +++ A H+
Sbjct: 777 SGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHK 810
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 270/771 (35%), Positives = 409/771 (53%), Gaps = 116/771 (15%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+++H + + ++ N I +Y K A F++ +V + L+ AY+
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91
Query: 78 QLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ AR++F++ P D V YN +I+ Y+ D SA+ LF+ MR F D FT +
Sbjct: 92 LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151
Query: 136 GLITASS-----NNLCLIKQLHCLAIYCGFDHYASVNNSLL------------------- 171
+++AS+ C Q+H + G + + +V N+LL
Sbjct: 152 SVLSASTLIFYDERQC--GQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209
Query: 172 ---------------------TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
T Y RNG L A+ + M E + ++WN+M+ Y H
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTE-QPGIAWNAMISGYLHHG 268
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH--- 267
+AL LF++M L + +D T S+++A + G Q HA+++K+ + +
Sbjct: 269 LFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLL 328
Query: 268 -IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY---SQKEE---------- 313
+G+ LI LY K G + K+F E+P D++ WNT++SGY + EE
Sbjct: 329 SVGNTLITLYWK-YGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPE 387
Query: 314 -----------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+ +QAL F ++ GY P+D +F I+ACS L G+Q+
Sbjct: 388 KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQL 447
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA + + S +SV NA++ MY++CG +E AR +F MP + VS NSMIA QHG
Sbjct: 448 HAQIVHLGHDST-LSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGH 506
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G++A+ L+E ML+ I P TF++VLSAC+H G V EG +YF+ M + +G P +HY+
Sbjct: 507 GVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYA 566
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPS 518
MIDL RAGK +DA+ +I++MPF + + ++AA +L P
Sbjct: 567 RMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQ 626
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ YV+L+N+YA+ G+W +VA R+LMRDRGV+K+P SW EV+ ++HVF+ +D HP
Sbjct: 627 HDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPE 686
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+ I+NYLE+++ +MK+ GY+PD KE L HSEKLAVAFGL+ G
Sbjct: 687 VLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGA 746
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ V KNLRICGDCHNAIKF+S + GREI VRD RFH FK+G CSC +YW
Sbjct: 747 TVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 163/316 (51%), Gaps = 12/316 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVP---FSAYLSNHFILLYSKCGCLSAAHHA 56
T+ V+ C + GK +HA LKN L P F + N I LY K G + A
Sbjct: 291 TYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKI 350
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F + ++ ++N LL+ Y R+ A+ F Q+P+ +L+++ +IS A G E AL
Sbjct: 351 FYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQAL 410
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
LF M+ ++ + + +G ITA S L +QLH ++ G D SV N+++T Y
Sbjct: 411 KLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMY 470
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+R G ++ A+ +F M + D VSWNSM+ A GQH G++A++L+++M+ + D T
Sbjct: 471 ARCGIVEAARTMFLTMPFV-DPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTF 529
Query: 235 ASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
++L+A S LV G F++ L G + +IDL+ + +G D V +
Sbjct: 530 LTVLSA-CSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCR-AGKFSDAKNVIDS 587
Query: 293 IP-QPDLVLWNTMISG 307
+P + +W +++G
Sbjct: 588 MPFEARAPIWEALLAG 603
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/642 (39%), Positives = 372/642 (57%), Gaps = 38/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + + AR +FD + + DL+S+N++I+ A G A+ LF +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D +T++ ++ A+S+ L L KQ+H AI + V+ +L+ YSRN + EA+
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F D V+WN+M+ Y Q +G + L+LF M D +TLA++ L
Sbjct: 474 LFERHN--FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G Q HA+ IKSG+ + + SG++D+Y KC GDM F+ IP PD V W TMI
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC-GDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG + E ++A F ++ +G PD+ + + A S L+ G+QIHA +K+
Sbjct: 591 SGCIENGE-EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+N V +LV MY+KCG+++DA LF R+ N + N+M+ G AQHG G E L+LF+
Sbjct: 650 -TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M I P +TF+ VLSAC+H+G V+E K+ M +G +PE EHYSC+ D LGRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G + AE LIE+M + + A L+LEP ++ YV+L+
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA+ KW+E+ R +M+ V+K PGFSWIEVK ++H+FV +D S+ + I+ ++
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+M R +KQ GYVP +KE+ L +HSEKLAVAFGLLST PI V+KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCHNA+K+I+ + REI +RD RFH FKDG CSCGDYW
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 198/460 (43%), Gaps = 97/460 (21%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ + DL+ GK HA L +L N+ I +YSKCG L+ A
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYA------------ 93
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-----TESALSLFK 120
R++FD++P DLVS+N++++AYA + + A LF+
Sbjct: 94 -------------------RRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL-------IKQLHCLAIYCGFDHYASVNNSLLTC 173
+R+ T TLS ++ LCL + H A G D V +L+
Sbjct: 135 ILRQDVVYTSRMTLSPML-----KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y + G + E K +F EM +D V WN M+ AY + EA+ L
Sbjct: 190 YLKFGKVKEGKVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAIDLSS------------- 235
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF--- 290
FH+ SG + N + L A+ SGD D +V
Sbjct: 236 ------------------AFHS----SGLNPNEIT----LRLLARISGDDSDAGQVKSFA 269
Query: 291 ---EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+ +++ N +S Y +YS L CF + D +F+ +++ +
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYS-ALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S +LG+Q+H + +K+ + ++V+N+L+ MY K AR +FD M E + +S NS+
Sbjct: 329 DSLALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
IAG AQ+G+ +EA+ LF +L + P T SVL A +
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 115/245 (46%), Gaps = 40/245 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V KTC + GK +HA +K+ ++S+ + +Y KCG +SAA A
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---- 574
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
FD IP PD V++ T+IS + G+ E A +F
Sbjct: 575 ---------------------------FDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI-----KQLHCLAIYCGFDHYASVNNSLLTCYS 175
MR D FT++ L ASS CL +Q+H A+ + V SL+ Y+
Sbjct: 608 QMRLMGVLPDEFTIATLAKASS---CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G +D+A +F + E+ + +WN+M+V QH EG E LQLF++M SL + D T
Sbjct: 665 KCGSIDDAYCLFKRI-EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 236 SILTA 240
+L+A
Sbjct: 724 GVLSA 728
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 30/197 (15%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ +HA LK ++ + +Y+KCG + A+ F + + N+ ++N +L
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 75 YARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-- 128
A+ QLF Q+ +PD V++ ++SA + G A +K MR D
Sbjct: 694 LAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA---YKHMRSMHGDYG 750
Query: 129 -----------TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
D +GL+ + N LI+ + + AS+ +LL
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAEN---LIESM-------SMEASASMYRTLLAACRVQ 800
Query: 178 GFLDEAKRVFYEMGEIK 194
G + KRV ++ E++
Sbjct: 801 GDTETGKRVATKLLELE 817
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/712 (35%), Positives = 396/712 (55%), Gaps = 72/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
FR +L+ C R L G+ +HA LK+ + + YL N + +Y+KCG L+
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLT--------- 99
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR++FD I ++VS+ +I A+ A ++
Sbjct: 100 ----------------------DARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ D T L+ A +N L L +++H + G + V SL+ Y++ G
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCG 197
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ +F + E K+ V+W ++ Y Q + AL+L + M ++ + T ASIL
Sbjct: 198 DISKARVIFDRLPE-KNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL 256
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
T+ L G + H ++I+SG+ + + + LI +Y KC G + + K+F ++P D+
Sbjct: 257 QGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGG-LEEARKLFSDLPHRDV 315
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL---GKQI 355
V W M++GY+Q + D+A+ F+++ + G PD +F V+++CS SP+ GK+I
Sbjct: 316 VTWTAMVTGYAQLG-FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCS--SPAFLQEGKRI 372
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY-AQHG 414
H + + + + +ALV+MY+KCG+++DA +F++M E N V+ ++I G AQHG
Sbjct: 373 HQQLVHAGYNLD-VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHG 431
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
EAL F+ M + I P +TF SVLSAC H G V EG+K+F M +G +P EHY
Sbjct: 432 RCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 491
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEP 517
SC +DLLGRAG L +AE +I +MPF PG +AA + L+L+P
Sbjct: 492 SCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDP 551
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ YV L++IYAA+G++E+ +R++M R V K+PG SWIEV ++HVF ED SHP
Sbjct: 552 DDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 611
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
++I+ L +++ ++K+ GYVPD KE+ L HSE+LA+ +GL+ T G
Sbjct: 612 ESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPG 671
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI ++KNLR+CGDCH A KFIS + GREI RD RFH F DG CSCGD+W
Sbjct: 672 MPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/730 (36%), Positives = 388/730 (53%), Gaps = 78/730 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C G + L GK +H++ N V L + LY+ CG L F+
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160
Query: 61 QHANVFSFNVLLAAYAR--------------------QLRIASARQLFDQIPQPDLVSYN 100
+ NV+ +N +++ YA+ R SA +LFD++ D++S+N
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 101 TLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYC 158
++IS Y G TE L ++K M D D T+ ++ A+S L L K +H LAI
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
F+ + +N+LL YS+ G LD A RVF +MGE ++ VSW SM+ Y + A++L
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIRL 339
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
Q+M + LD+ SIL A L G H ++ + N + + L+D+Y K
Sbjct: 340 LQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTK 399
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G M VF + D++ WNTMI G K PD +
Sbjct: 400 C-GSMDGANSVFSTMVVKDIISWNTMI--------------GELK--------PDSRTMA 436
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
C++ AC++LS GK+IH ++ S+R V NALV +Y KCG L AR LFD +P
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS MI+GY HG G EA+ F M + I P ++F+S+L AC+H+G + +G ++
Sbjct: 496 KDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F +MK+ F EP+ EHY+CM+DLL R G L+ A IE +P P +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYH 615
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A K A +LEP N YV+LANIYA + KWEEV +R + +G++K PG SWI
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWI 675
Query: 561 EVKKQMHVFVA-EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLV 607
E+K ++++FV+ + SHP K+I + L++M RKMK+ GY P KE L
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALC 735
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFGLL+ + + V KNLR+CGDCH KF+S REI +RD+ RFH FK
Sbjct: 736 GHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795
Query: 668 DGRCSCGDYW 677
+G CSC +W
Sbjct: 796 NGYCSCRGFW 805
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 146/322 (45%), Gaps = 58/322 (18%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
L+ T +S+L + L G + H+ + + + +G L+ LYA C GD+++ +
Sbjct: 97 LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATC-GDLKEGRR 155
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEY---------------------------------- 314
VF+ + + ++ LWN M+S Y++ ++
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRD 215
Query: 315 ----------------SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+++ L +K++ +G D + + V+ C+N SLGK +H+
Sbjct: 216 VISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK RI+ +N L+ MYSKCG+L+ A R+F++M E N VS SMIAGY + G
Sbjct: 276 LAIKSTFE-RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC- 476
A+RL + M + + + S+L ACA +G + G+ +K E + C
Sbjct: 335 GAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIK---ANNMESNLFVCN 391
Query: 477 -MIDLLGRAGKLTDAERLIEAM 497
++D+ + G + A + M
Sbjct: 392 ALMDMYTKCGSMDGANSVFSTM 413
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/692 (37%), Positives = 397/692 (57%), Gaps = 59/692 (8%)
Query: 40 FILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSY 99
+ ++ +CG + A F+Q + +F N +LA YA+ I A + F+ + + D+VS+
Sbjct: 169 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 228
Query: 100 NTLISAYADCGDTESALSLFKDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAIY 157
N +I+A + G AL L +M K R D+ +T S A +L KQLH I
Sbjct: 229 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 288
Query: 158 C--GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
D Y V ++L+ Y++ G EAKRVF + + ++ VSW ++ Q+ ++
Sbjct: 289 SLPQIDPY--VASALIELYAKCGSFKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKS 345
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
++LF +M + + +D + LA++++ + DL G Q H+ +KSG ++ + + LI L
Sbjct: 346 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 405
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ-------KEEYSDQA---------- 318
YAKC GD+++ VF + + D+V W +MI+ YSQ +E + A
Sbjct: 406 YAKC-GDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAM 464
Query: 319 LGCFKK--------------LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIE 363
LG + + L++ PD ++V + C+++ + LG QI T+K
Sbjct: 465 LGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAG 524
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ N +SV NA + MYSKCG + +A++LFD + + VS N+MI GY+QHG+G +A + F
Sbjct: 525 LILN-VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 583
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ ML P I++V+VLS C+H+G V EG+ YF MM + G P EH+SCM+DLLGR
Sbjct: 584 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 643
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
AG LT+A+ LI+ MP P + +A AA H +L+ ++ Y++L
Sbjct: 644 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 703
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
A IY+ +GK ++ A +R+LMRD+G++K PG+SW+EV+ ++HVF A+D SHP + I N +
Sbjct: 704 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKM 763
Query: 587 EEMSRKMKQAGYVPDKEKRL-VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
+E+ K+ GYV + R +HHSEKLAVAFG++S PI +MKNLRICGDCH IK
Sbjct: 764 DELMEKIAHLGYVRTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIK 823
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS++ RE +RD RFH FK G CSCGDYW
Sbjct: 824 LISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 235/490 (47%), Gaps = 40/490 (8%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN-QTQHAN 64
L++C R L ++LH + + + +L N + Y CG LS A + N
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLIS-------AYADCGD------ 111
V + N+++ YA+Q ++ A +LFD++P+ D+ S+NTL+S ++ CG
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 112 TESALSLF------KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS 165
L LF D + D F G + +S L Q+ I+C
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASR---LFSQIERPTIFC------- 196
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
NS+L Y++ +D A F +M E +D VSWN M+ A Q EAL L EM
Sbjct: 197 -RNSMLAGYAKLYGIDHAIEYFEDMAE-RDVVSWNMMIAALSQSGRVREALGLVVEMHRK 254
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ LD T S LTA L L G Q HA +I+S + ++ S LI+LYAKC G ++
Sbjct: 255 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC-GSFKE 313
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+VF + + V W +I G Q E +S +++ F ++ D + +IS C
Sbjct: 314 AKRVFNSLQDRNSVSWTVLIGGSLQYECFS-KSVELFNQMRAELMAIDQFALATLISGCF 372
Query: 346 N-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
N + LG+Q+H+L +K + I V+N+L+++Y+KCG+L++A +F M E + VS
Sbjct: 373 NRMDLCLGRQLHSLCLK-SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
SMI Y+Q G ++A F+ M N IT+ ++L A G +G K +S M
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATRNA----ITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 465 FGFEPEGEHY 474
P+ Y
Sbjct: 488 KDVTPDWVTY 497
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 216/499 (43%), Gaps = 71/499 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C L GK LHA +++L Y+++ I LY+KCG A FN
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q N S+ VL+ + + + +LF+Q
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQ------------------------------ 351
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + D F L+ LI+ N +LCL +QLH L + G + V+NSL++ Y++ G
Sbjct: 352 -MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 410
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL----------- 227
L A+ VF M E +D VSW SM+ AY Q ++A + F M +
Sbjct: 411 DLQNAEFVFSSMSE-RDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYI 469
Query: 228 -------GLDMYT-----------LASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNS 266
GL MY+ + +T F D+ G Q H +K+G N
Sbjct: 470 QHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNV 529
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + I +Y+KC G + + K+F+ + D+V WN MI+GYSQ QA F +
Sbjct: 530 SVANAAITMYSKC-GRISEAQKLFDLLNGKDVVSWNAMITGYSQ-HGMGKQAAKTFDDML 587
Query: 327 RVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G PD S+V V+S CS+ GK + ++ S + + +V + + G+L
Sbjct: 588 SKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHL 647
Query: 386 EDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+A+ L D+MP T + ++++ HG A + + E + P + +++ +
Sbjct: 648 TEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSG-SYMLLAKI 706
Query: 445 CAHTGKVAEGQKYFSMMKD 463
+ GK + + +M+D
Sbjct: 707 YSDAGKSDDSAQVRKLMRD 725
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/709 (36%), Positives = 393/709 (55%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G+ +H ++ + +A + N I +Y+KCG
Sbjct: 147 TFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGS----------- 195
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + D VS+ TL AYA+ G + +L +
Sbjct: 196 --------------------VRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYH 235
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ T +++A + L K Q+H + V+ +L Y + G
Sbjct: 236 AMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCG 295
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ VF E +D ++WN+M+ + EA +F M+ + D T +IL
Sbjct: 296 AVKDAREVF-ECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L G + HA +K G + G+ LI++Y+K +G M+D +VF+ +P+ D+
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSK-AGSMKDARQVFDRMPKRDV 413
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHA 357
V W ++ GY+ + ++ FKK+ + G + +++CV+ ACSN ++ GK+IHA
Sbjct: 414 VSWTALVGGYADCGQVV-ESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHA 472
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K I ++ ++V NAL++MY KCG++EDA R+ + M + V+ N++I G AQ+G G+
Sbjct: 473 EVVKAGIFAD-LAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGL 531
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+ FE M + P TFV+V+SAC V EG++ F+ M+ +G P +HY+CM
Sbjct: 532 EALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACM 591
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+D+L RAG L +AE +I MPF P + I +AA L+LEP NA
Sbjct: 592 VDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNA 651
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV L+ IYAA+G W +VA +R+LM++RGV+K+PG SWIEV ++H FVA D SHP +
Sbjct: 652 GTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTE 711
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI++ LE +++++K GYVPD KE+ + HHSEKLA+A+GL+ST PI
Sbjct: 712 EIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPI 771
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLR+C DCH A KFIS I GREI RD +RFH FK+G CSCGDYW
Sbjct: 772 RVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 264/499 (52%), Gaps = 39/499 (7%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++L++CV +DL GK +H L+ + + Y+ N + LY CG ++
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN---------- 96
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
AR+LFD+ +VS+N +IS YA G + A +LF
Sbjct: 97 ---------------------EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTL 135
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+++ + D FT +++A S+ L +++H + G + A+V N+L++ Y++ G
Sbjct: 136 MQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGS 195
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A+RVF M +DEVSW ++ AY + E+L+ + M+ + T ++L+
Sbjct: 196 VRDARRVFDAMAS-RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLS 254
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A SL L G Q HA +++S H + + + L +Y KC G ++D +VFE +P D++
Sbjct: 255 ACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC-GAVKDAREVFECLPNRDVI 313
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WNTMI G + ++A G F ++ + PD +++ ++SAC+ + GK+IHA
Sbjct: 314 AWNTMIGGLVDSGQL-EEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHAR 372
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K + S+ + NAL+ MYSK G+++DAR++FDRMP+ + VS +++ GYA G +E
Sbjct: 373 AVKDGLVSD-VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVE 431
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+ F+ ML+ + IT++ VL AC++ + G++ + + G + + ++
Sbjct: 432 SFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GIFADLAVANALM 490
Query: 479 DLLGRAGKLTDAERLIEAM 497
+ + G + DA R+ E M
Sbjct: 491 SMYFKCGSVEDAIRVSEGM 509
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 258/535 (48%), Gaps = 68/535 (12%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ +L + KQ+H + G + N+LL Y G ++EA+R+F + K VSWN
Sbjct: 57 AKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSN-KSVVSWNV 115
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Y G EA LF M L D +T SIL+A +S L G + H ++++G
Sbjct: 116 MISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAG 175
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
N+ +G+ LI +YAKC G +RD +VF+ + D V W T+ Y++ Y+ ++L
Sbjct: 176 LANNATVGNALISMYAKC-GSVRDARRVFDAMASRDEVSWTTLTGAYAE-SGYAQESLKT 233
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ + + G P +++ V+SAC +L+ GKQIHA ++ E S+ + V+ AL MY
Sbjct: 234 YHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD-VRVSTALTKMYI 292
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG ++DAR +F+ +P + ++ N+MI G G EA +F ML+ + P +T+++
Sbjct: 293 KCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLA 352
Query: 441 VLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+LSACA G +A G++ + +KD G + + +I++ +AG + DA ++ + MP
Sbjct: 353 ILSACARPGGLACGKEIHARAVKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP- 409
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+ V + L YA G+ E + + M +GV
Sbjct: 410 -----------------KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGV-------- 444
Query: 560 IEVKKQMHVFVAEDGSHPMI----KEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAV 615
E K ++ V + S+P+ KEIH ++ +AG D LAV
Sbjct: 445 -EANKITYMCVLKACSNPVALKWGKEIHA-------EVVKAGIFAD-----------LAV 485
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
A L+S + CG +AI+ ++ R++ +T ++GR
Sbjct: 486 ANALMSMYFK-----------CGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGR 529
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 151/277 (54%), Gaps = 17/277 (6%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+D Y +L + +DL G Q H H+++ G N +I + L+ LY C G + + +
Sbjct: 42 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHC-GSVNEARR 100
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F++ +V WN MISGY+ + +A F + + G PD +FV ++SACS+ +
Sbjct: 101 LFDKFSNKSVVSWNVMISGYAHRG-LGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+ G+++H ++ + +N +V NAL++MY+KCG++ DARR+FD M + VS ++
Sbjct: 160 ALNWGREVHVRVMEAGL-ANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
YA+ G E+L+ + ML+ + P+ IT+++VLSAC + +G++ + +
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI------ 272
Query: 468 EPEGEHYS------CMIDLLGRAGKLTDAERLIEAMP 498
E EH+S + + + G + DA + E +P
Sbjct: 273 -VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 259/710 (36%), Positives = 387/710 (54%), Gaps = 72/710 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L+ C L GK +HA + Y+ + +Y+KCG +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSME---------- 364
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A ++FD + ++VS+ +I+ +A G + A F
Sbjct: 365 ---------------------DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M E + + T ++ A S+ L + Q+ I G+ V +LL+ Y++ G
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGS 463
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L +A RVF ++ + ++ V+WN+M+ AY QH + AL FQ ++ + + T SIL
Sbjct: 464 LKDAHRVFEKISK-QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
S + L G H ++K+G + H+ + L+ ++ C GD+ +F ++P+ DLV
Sbjct: 523 VCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC-GDLMSAKNLFNDMPKRDLV 581
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP---SLGKQIH 356
WNT+I+G+ Q + + A FK + G PD +F +++AC+ SP + G+++H
Sbjct: 582 SWNTIIAGFVQHGK-NQVAFDYFKMMQESGIKPDKITFTGLLNACA--SPEALTEGRRLH 638
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
AL + + + V L++MY+KCG++EDA ++F ++P+ N S SMI GYAQHG G
Sbjct: 639 ALITEAAFDCD-VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRG 697
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL LF M + + P ITFV LSACAH G + EG +F MK+ F EP EHY C
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGC 756
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
M+DL GRAG L +A I M P S +A KAA L+L+P++
Sbjct: 757 MVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPND 816
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+V+L+NIYAA+G W+EVA +R++M DRGV KKPG SWIEV ++H F ++D +HP
Sbjct: 817 NGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQT 876
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
+EIH LE + +M+Q GYVPD KE+ L +HSE+LA+ +GLL T P
Sbjct: 877 EEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTP 936
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I++ KNLR+CGDCH A KFIS I R+I RD+ RFH FKDG CSCGD+W
Sbjct: 937 IVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 249/506 (49%), Gaps = 49/506 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C+ ++L G+ ++ K+ V ++ N I +Y+KCG +A F+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ +V+S+N+LL Y + A +L +Q+ Q PD ++ ++++A AD + +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L+ + + +DTD F V +L+ + +
Sbjct: 232 ELYNLILKAGWDTDLF---------------------------------VGTALINMHIK 258
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + +A +VF + +D V+W SM+ +H +A LFQ M + D S
Sbjct: 259 CGDIGDATKVFDNL-PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A E L G + HA + + G+ ++G+ ++ +Y KC G M D ++VF+ +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC-GSMEDALEVFDLVKGR 376
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL---GK 353
++V W MI+G++Q D+A F K+ G P+ +F+ ++ ACS SPS G+
Sbjct: 377 NVVSWTAMIAGFAQHGRI-DEAFLFFNKMIESGIEPNRVTFMSILGACS--SPSALKRGQ 433
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QI I+ S+ V AL++MY+KCG+L+DA R+F+++ + N V+ N+MI Y QH
Sbjct: 434 QIQDHIIEAGYGSDD-RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGE 472
AL F+ +L+ I P + TF S+L+ C + + G+ +F +MK G E +
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLH 550
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + G L A+ L MP
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMP 576
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 168/301 (55%), Gaps = 5/301 (1%)
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+IKD N+++ + + EA+Q+ + + S + + T +++L ++L G
Sbjct: 70 ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
+ + H+ KSG + + + LI++YAKC G+ ++F+++ + D+ WN ++ GY Q
Sbjct: 130 ERIYNHIKKSGVQPDIFMWNTLINMYAKC-GNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRI 369
Y ++A +++ + PD +FV +++AC++ + G++++ L +K ++ +
Sbjct: 189 HGLY-EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD-L 246
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V AL+ M+ KCG++ DA ++FD +P + V+ SMI G A+HG +A LF+ M E
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P + FVS+L AC H + +G+K + MK++ G++ E + ++ + + G + D
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMED 365
Query: 490 A 490
A
Sbjct: 366 A 366
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 60/320 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +H L +K + ++SN + ++ CG L +A + FN
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFN-- 573
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P+ DLVS+NT+I+ + G + A FK
Sbjct: 574 -----------------------------DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E D T +GL+ A ++ L ++LH L FD V L++ Y++ G
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A +VF+++ + K+ SW SM+ Y QH G EAL+LF +M + D T L
Sbjct: 665 SIEDAHQVFHKLPK-KNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGAL 723
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH------------QNSHIGSGLIDLYAKCSGDMRDC 286
+A HA LI+ G H + H G ++DL+ + +G + +
Sbjct: 724 SACA-----------HAGLIEEGLHHFQSMKEFNIEPRMEHYGC-MVDLFGR-AGLLNEA 770
Query: 287 MKVFEEIP-QPDLVLWNTMI 305
++ ++ +PD +W ++
Sbjct: 771 VEFIIKMQVEPDSRVWGALL 790
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ MY+KCGN A+++FD M E + S N ++ GY QHG+ EA +L E M++ ++
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P TFVS+L+ACA V +G++ ++++ G++ + + +I++ + G + DA +
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATK 267
Query: 493 LIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + +P + V + + A G++++ + + M + GVQ
Sbjct: 268 VFDNLP------------------TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/709 (36%), Positives = 386/709 (54%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C DL GK LH+ LK + + + LY K G
Sbjct: 246 TIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSG------------ 293
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A Q+FD + ++V +N ++ AY D + +F
Sbjct: 294 -------------------DIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFY 334
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + FT ++ ++ + L +Q+H L I GF V+ L+ YS+ G
Sbjct: 335 RMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYG 394
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+LD+A+R+ +M E KD VSW SM+ Y QH EAL+ F+EM + + D LAS +
Sbjct: 395 WLDKAQRIL-DMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAI 453
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A ++ + G Q HA + SG+ + I +GL+ LYA+C G ++ FE I +
Sbjct: 454 SACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARC-GISKEAFSSFEAIEHKEG 512
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN +ISG++Q Y ++AL F K+++ G + +FV ISA +NL+ GKQIHA
Sbjct: 513 ITWNGLISGFAQSGLY-EEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK S ++NAL+++Y KCG++EDA+ F M + N VS N++I +QHG G+
Sbjct: 572 RVIKTGYTSE-TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGL 630
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF+ M + + P+++TFV VL+AC+H G V EG YF M + G P +HY+C+
Sbjct: 631 EALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACV 690
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
+D+LGRAG+L A+R +E MP S+ + AA H L+LEP ++
Sbjct: 691 VDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDS 750
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N YA +GKW IR++M+DRGV+K+PG SWIEVK +H F D HP+
Sbjct: 751 ASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAD 810
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+N+L ++ ++ + GY + K+ HSEKLAVAFGL+S P+
Sbjct: 811 QIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPL 870
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCH +KF S + GREI +RD YRFH F +G CSCGDYW
Sbjct: 871 RVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 281/568 (49%), Gaps = 41/568 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ YA++ + AR++F+++ D VS+ ++S YA G E A+ L+++M
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 129 TDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS +++A + L + +H GF V N+L++ Y R A RV
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M D V++N+++ + Q G AL +F EM L D T+AS+L A +++ D
Sbjct: 201 FCDMLYC-DSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGD 259
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L+K+G + + L+DLY K SGD+ + +++F+ + ++VLWN M+
Sbjct: 260 LRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVK-SGDIEEALQIFDSGDRTNVVLWNLMLV 318
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q ++ + ++ F ++ G P+ ++ C++ C++ LG+QIH+LTIK +
Sbjct: 319 AYGQIDDLA-KSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK G L+ A+R+ D + E + VS SMIAGY QH EAL F+
Sbjct: 378 SD-MYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKE 436
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M I P NI S +SACA V +G + + + + G+ + ++ ++ L R G
Sbjct: 437 MQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY-VSGYSADVSIWNGLVYLYARCG 495
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
I+ +A + F +E + + L + +A SG +EE +
Sbjct: 496 ------------------ISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMK 537
Query: 546 MRDRG-----------VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
M G + + I+ KQ+H V + G + EI N L + K
Sbjct: 538 MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTG-YTSETEISNALISLYGK-- 594
Query: 595 QAGYVPDKEKRLVHHSEKLAVAFGLLST 622
G + D + +++ V++ + T
Sbjct: 595 -CGSIEDAKMDFFEMTKRNEVSWNTIIT 621
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 231/440 (52%), Gaps = 8/440 (1%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
+ Q + F N L++ Y R A ++F + D V++NTLIS +A CG +
Sbjct: 168 QVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDR 227
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
AL +F +M+ D T++ L+ A S +L KQLH + G + SLL
Sbjct: 228 ALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLD 287
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y ++G ++EA ++F + G+ + V WN M+VAYGQ + ++ +F M++ + + +
Sbjct: 288 LYVKSGDIEEALQIF-DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKF 346
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T +L T ++ G Q H+ IK+GF + ++ LID+Y+K G + ++ +
Sbjct: 347 TYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSK-YGWLDKAQRILDM 405
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
I + D+V W +MI+GY Q E+ +AL FK++ G PD+ ISAC+ +
Sbjct: 406 IEEKDVVSWTSMIAGYVQ-HEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ 464
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G QIHA + + S +S+ N LV +Y++CG ++A F+ + ++ N +I+G+A
Sbjct: 465 GSQIHA-RVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFA 523
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q G+ EAL++F M + TFVS +SA A+ + +G++ + + G+ E
Sbjct: 524 QSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSET 582
Query: 472 EHYSCMIDLLGRAGKLTDAE 491
E + +I L G+ G + DA+
Sbjct: 583 EISNALISLYGKCGSIEDAK 602
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 209/405 (51%), Gaps = 11/405 (2%)
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA---SSNNLCLIKQLHCL 154
S+N ++ + D E L LF + + + A S L+ ++H
Sbjct: 8 SFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAK 67
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
AI CG Y + N L+ Y++ GF+ A+RVF E+ ++D VSW +++ Y Q+ G E
Sbjct: 68 AIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL-SVRDNVSWVAVLSGYAQNGLGEE 126
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A++L++EM + Y L+SIL+A T E G H + K GF + +G+ LI
Sbjct: 127 AVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALIS 186
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
LY +C R +VF ++ D V +NT+ISG++Q + D+ALG F ++ G PD
Sbjct: 187 LYLRCR-SFRLADRVFCDMLYCDSVTFNTLISGHAQC-GHGDRALGIFDEMQLSGLSPDS 244
Query: 335 CSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ +++ACS + GKQ+H+ +K + + I + +L+ +Y K G++E+A ++FD
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYI-MEGSLLDLYVKSGDIEEALQIFD 303
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
N V N M+ Y Q ++ +F ML + P T+ +L C HTG++
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL 363
Query: 454 GQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G++ S+ +K+ GF+ + +ID+ + G L A+R+++ +
Sbjct: 364 GEQIHSLTIKN--GFQSDMYVSGVLIDMYSKYGWLDKAQRILDMI 406
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/709 (35%), Positives = 380/709 (53%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C DL GK LH+ LK + F + LY KCG + AH FN
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV V +N ++ AY D + +F
Sbjct: 307 DRTNV-------------------------------VLWNLMLVAYGQISDLAKSFEIFG 335
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + FT ++ + + L +Q+H L+I GF+ V+ L+ YS+
Sbjct: 336 QMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYR 395
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A+++ EM E +D VSW SM+ Y QH EAL F+EM + D LAS
Sbjct: 396 CLDKARKIL-EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A ++ + GLQ HA + SG+ + I + L++LYA+C G + +F EI D
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC-GRSEEAFSLFREIDHKDE 513
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN +ISG+ Q Y +QAL F K+++ G + +F+ ISA +NL+ GKQ+H
Sbjct: 514 ITWNGLISGFGQSRLY-EQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K ++ V NAL+++Y KCG++EDA+ +F M N VS N++I +QHG G+
Sbjct: 573 RAVKTG-HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGL 631
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF+ M + + P ++TF+ VL+AC+H G V EG YF M +++G P +HY+C+
Sbjct: 632 EALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV 691
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
+D+LGRAG+L A R ++ MP ++ + AA H L+LEP ++
Sbjct: 692 VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDS 751
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N YA +GKW +R++M+DRG++K+PG SWIEVK +H F D HP+
Sbjct: 752 ASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSD 811
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ +L E++ ++ + GY + K+ HSEKLAVAFGL++ P+
Sbjct: 812 QIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPL 871
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCH+ +KF S + REI +RD YRFH F G CSCGDYW
Sbjct: 872 RVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 218/425 (51%), Gaps = 8/425 (1%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ YA+ + ARQ+F ++ D VS+ ++S YA G + A L+ M
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS +++A + + +H F V N+L+ Y G A+RV
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M D V++N+++ + Q G ALQ+F EM L D T+AS+L A S+ D
Sbjct: 202 FCDM-LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L+K+G + L+DLY KC GD+ +F + ++VLWN M+
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC-GDIETAHDIFNLGDRTNVVLWNLMLV 319
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q + + ++ F ++ G HP+ ++ C++ C+ LG+QIH+L+IK
Sbjct: 320 AYGQISDLA-KSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK L+ AR++ + + + + VS SMIAGY QH EAL F+
Sbjct: 379 SD-MYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + + P NI S SACA + +G + + + + G+ + ++ +++L R G
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY-VSGYAADISIWNTLVNLYARCG 496
Query: 486 KLTDA 490
+ +A
Sbjct: 497 RSEEA 501
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 238/496 (47%), Gaps = 21/496 (4%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV---------FSF 68
G A L + + ++A + ++L C A + HA V F
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y A ++F + D V++NTLIS +A CG E AL +F +M+
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T++ L+ AS +L KQLH + G SLL Y + G ++ A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +G+ + V WN M+VAYGQ + ++ ++F +M + + + +T IL T
Sbjct: 303 F-NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK--CSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ G Q H+ IK+GF + ++ LID+Y+K C R K+ E + + D+V W +M
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKAR---KILEMLEKRDVVSWTSM 418
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I+GY Q ++ ++AL FK++ G PD+ SAC+ + G QIHA + +
Sbjct: 419 IAGYVQ-HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA-RVYVS 476
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ IS+ N LV +Y++CG E+A LF + + ++ N +I+G+ Q + +AL +F
Sbjct: 477 GYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVF 536
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M + TF+S +SA A+ + +G++ G E E + +I L G+
Sbjct: 537 MKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGK 595
Query: 484 AGKLTDAERLIEAMPF 499
G + DA+ + M
Sbjct: 596 CGSIEDAKMIFSEMSL 611
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 235/527 (44%), Gaps = 43/527 (8%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N L+ ++H ++ G + N L+ Y++NG + +A++VF E+ +D VSW +M
Sbjct: 57 NRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS-RDHVSWVAM 115
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ Y Q G EA +L+ +M + Y L+S+L+A T + G HA + K F
Sbjct: 116 LSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAF 175
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ +G+ LI LY G + +VF ++ D V +NT+ISG++Q + + AL F
Sbjct: 176 CSETFVGNALIALYLG-FGSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIF 233
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
++ G PD + +++AC+++ GKQ+H+ +K + + I+ +L+ +Y K
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT-EGSLLDLYVK 292
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG++E A +F+ N V N M+ Y Q ++ +F M T I P T+ +
Sbjct: 293 CGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCI 352
Query: 442 LSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
L C TG++ G++ S+ +K+ GFE + +ID+ + L A +++E
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKN--GFESDMYVSGVLIDMYSKYRCLDKARKILE----- 405
Query: 501 PGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK------ 554
LE + V + + Y EE + M+D GV
Sbjct: 406 -------------MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 555 -----PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHH 609
G + Q+H V G I I N L + + ++ + + H
Sbjct: 453 AASACAGIKAMRQGLQIHARVYVSGYAADI-SIWNTLVNLYARCGRSEEAFSLFREIDHK 511
Query: 610 SE----KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
E L FG S Y + ++V + G +N FISAI+
Sbjct: 512 DEITWNGLISGFG-QSRLYEQALMVFMKMSQAGAKYNVFTFISAISA 557
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 337 FVCVISAC---SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
C + AC N P L +IHA ++ + ++R+ + N L+ +Y+K G + AR++F
Sbjct: 45 LTCALQACRGRGNRWP-LVLEIHATSVVRGLGADRL-IGNLLIDLYAKNGLVWQARQVFK 102
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+ + VS +M++GYAQ G+G EA RL+ M T + PT SVLSAC A+
Sbjct: 103 ELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQ 162
Query: 454 GQ 455
G+
Sbjct: 163 GR 164
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/730 (36%), Positives = 385/730 (52%), Gaps = 78/730 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C G + GK +H++ N V L + Y+ CG L F+
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 61 QHANVFSFNVLLAAYAR--------------------QLRIASARQLFDQIPQPDLVSYN 100
+ NV+ +N +++ YA+ R SA +LFD++ D++S+N
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 101 TLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYC 158
++IS Y G TE L ++K M D D T+ ++ A+S L L K +H LAI
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
F+ + +N+LL YS+ G LD A RVF +MGE ++ VSW SM+ Y + A++L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
Q+M + LD+ + SIL A L G H ++ + N + + L+D+YAK
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G M VF + D++ WNTMI PD +
Sbjct: 400 C-GSMEAANSVFSTMVVKDIISWNTMIGELK----------------------PDSRTMA 436
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
CV+ AC++LS GK+IH ++ S+R V NALV +Y KCG L AR LFD +P
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS MIAGY HG G EA+ F M + I P ++F+S+L AC+H+G + +G ++
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F +MK+ F EP+ EHY+CM+DLL R G L+ A IE +P P +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYH 615
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A K A +LEP N+ YV+LANIYA + KWEEV +R + +G++K PG SWI
Sbjct: 616 DIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675
Query: 561 EVKKQMHVFVA-EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLV 607
E+K ++++FV+ + SHP K I + L++M RKMK+ G+ P KE L
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALC 735
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFGLL+ + I V KNLR+CGDCH KF+S REI +RD RFH FK
Sbjct: 736 GHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFK 795
Query: 668 DGRCSCGDYW 677
DG CSC +W
Sbjct: 796 DGYCSCRGFW 805
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 214/510 (41%), Gaps = 98/510 (19%)
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA 155
+ YN I + GD E+A+ L ++ +T ++ + A + K++H +
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSII 125
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM------------------GEIK--- 194
++ L++ Y+ G L E +RVF M G+ K
Sbjct: 126 KSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 195 -----------------------------DEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
D +SWNSM+ Y + L ++++M+ L
Sbjct: 186 CLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 245
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +D+ T+ S+L + L G H+ IKS F + + + L+D+Y+KC GD+
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDG 304
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++VFE++ + ++V W +MI+GY+ ++ SD A+ +++ + G D + ++ AC+
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYT-RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 346 NLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S SL GK +H + SN + V NAL+ MY+KCG++E A +F M + +S
Sbjct: 364 R-SGSLDNGKDVHDYIKANNMESN-LFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISW 421
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMK 462
N+MI + P + T VL ACA + G++ +++
Sbjct: 422 NTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILR 460
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVP 522
+ G+ + + ++DL + G L A L + +P + V
Sbjct: 461 N--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP------------------SKDLVS 500
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ ++ Y G E MRD G++
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/709 (35%), Positives = 388/709 (54%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G+ +H ++ + + N I +Y+KCG
Sbjct: 131 TFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS----------- 179
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + D VS+ TL AYA+ G E +L +
Sbjct: 180 --------------------VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYH 219
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++R T +++A + L K Q+H + + V+ +L Y + G
Sbjct: 220 AMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCG 279
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+ VF E +D ++WN+M+ + + EA F M+ + D T ++L
Sbjct: 280 AFKDAREVF-ECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L G + HA K G + G+ LI++Y+K +G M+D +VF+ +P+ D+
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSK-AGSMKDARQVFDRMPKRDV 397
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHA 357
V W T++ Y+ ++ ++ FK++ + G + +++CV+ ACSN ++ GK+IHA
Sbjct: 398 VSWTTLLGRYADCDQVV-ESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHA 456
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + ++ ++V NAL++MY KCG++EDA R+F+ M + V+ N++I G Q+G G+
Sbjct: 457 EVVKAGLLAD-LAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGL 515
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+ +E M + P TFV+VLSAC V EG++ F+ M +G P +HY+CM
Sbjct: 516 EALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACM 575
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+D+L RAG L +AE +I +P P + I +AA H L+LEP NA
Sbjct: 576 VDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNA 635
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV L+ IYAA+G W +VA +R+ M++RGV+K+PG SWIE+ ++H FVA D SHP +
Sbjct: 636 GLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQ 695
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ LE + ++MK GYVPD KE+ + HHSEKLA+A+GL+ST G PI
Sbjct: 696 EIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPI 755
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+C DCH A KFIS I REI RD +RFH FK+G CSCGDYW
Sbjct: 756 RISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 262/499 (52%), Gaps = 39/499 (7%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++L++CV +DL GK +H L+ CG
Sbjct: 31 YVKLLQSCVKAKDLAVGKQVHEHILR-------------------CGV------------ 59
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV+ N LL YA + ARQLFD+ +VS+N +IS YA G + A +LF
Sbjct: 60 KPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTL 119
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+++R + D FT +++A S+ L +++H + G + +V N+L++ Y++ G
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A+RVF M +DEVSW ++ AY + G E+L+ + M+ ++ T ++L+
Sbjct: 180 VRDARRVFDAMAS-RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLS 238
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A SL L G Q HAH+++S +H + + + L +Y KC G +D +VFE + D++
Sbjct: 239 ACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC-GAFKDAREVFECLSYRDVI 297
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WNTMI G+ + ++A G F ++ G PD ++ V+SAC+ + GK+IHA
Sbjct: 298 AWNTMIRGFVDSGQL-EEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHAR 356
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
K + S+ + NAL+ MYSK G+++DAR++FDRMP+ + VS +++ YA +E
Sbjct: 357 AAKDGLVSD-VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVE 415
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+ F+ ML+ + IT++ VL AC++ + G++ + + G + + ++
Sbjct: 416 SFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALM 474
Query: 479 DLLGRAGKLTDAERLIEAM 497
+ + G + DA R+ E M
Sbjct: 475 SMYFKCGSVEDAIRVFEGM 493
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 253/535 (47%), Gaps = 68/535 (12%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ +L + KQ+H + CG + N+LL Y+ G ++EA+++F + K VSWN
Sbjct: 41 AKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSN-KSVVSWNV 99
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Y EA LF M +L D +T SIL+A +S L G + H ++++G
Sbjct: 100 MISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAG 159
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
++ +G+ LI +YAKC G +RD +VF+ + D V W T+ Y++ Y +++L
Sbjct: 160 LANDTTVGNALISMYAKC-GSVRDARRVFDAMASRDEVSWTTLTGAYAE-SGYGEESLKT 217
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ + + P +++ V+SAC +L+ GKQIHA ++ E S+ + V+ AL MY
Sbjct: 218 YHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD-VRVSTALTKMYM 276
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG +DAR +F+ + + ++ N+MI G+ G EA F MLE + P T+ +
Sbjct: 277 KCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTT 336
Query: 441 VLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
VLSACA G +A G++ + KD G + + +I++ +AG + DA ++ + MP
Sbjct: 337 VLSACARPGGLARGKEIHARAAKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP- 393
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+ V + L YA + E T + M +GV+
Sbjct: 394 -----------------KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK------- 429
Query: 560 IEVKKQMHVFVAEDGSHPMI----KEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAV 615
K ++ V + S+P+ KEIH ++ +AG + D LAV
Sbjct: 430 --ANKITYMCVLKACSNPVALKWGKEIHA-------EVVKAGLLAD-----------LAV 469
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
L+S + CG +AI+ ++ R++ +T ++GR
Sbjct: 470 TNALMSMYFK-----------CGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGR 513
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 152/274 (55%), Gaps = 9/274 (3%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+D Y +L + +DL G Q H H+++ G N +I + L+ LYA C G + + +
Sbjct: 26 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHC-GSVNEARQ 84
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F++ +V WN MISGY+ + + +A F + + PD +FV ++SACS S
Sbjct: 85 LFDKFSNKSVVSWNVMISGYAHRG-LAQEAFNLFTLMQQERLEPDKFTFVSILSACS--S 141
Query: 349 PSL---GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
P++ G++IH ++ + +N +V NAL++MY+KCG++ DARR+FD M + VS +
Sbjct: 142 PAVLNWGREIHVRVMEAGL-ANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+ YA+ G G E+L+ + ML+ + P+ IT+++VLSAC + +G++ + + +
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVES- 259
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ + + + + + G DA + E + +
Sbjct: 260 EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSY 293
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/709 (36%), Positives = 384/709 (54%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C DL GK LH+ LK + + + LY KCG
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGV----------- 294
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A ++F + ++V +N ++ AY D + LF
Sbjct: 295 --------------------IVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFC 334
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + FT L+ + + L +Q+H L+I GF+ V+ L+ YS+ G
Sbjct: 335 QMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYG 394
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+LD+A+R+ E+ E KD VSW SM+ Y QH EAL+ F++M + D LAS +
Sbjct: 395 WLDKARRIL-EVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAI 453
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A ++ + G Q H+ + SG+ + I + L++LYA+C G ++ +FE I D
Sbjct: 454 SACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC-GRSKEAFSLFEAIEHKDK 512
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN M+SG++Q Y ++AL F K+ + G + +FV ISA +NL+ GKQIHA
Sbjct: 513 ITWNGMVSGFAQSGLY-EEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK S V NAL+++Y KCG++EDA+ F M E N VS N++I +QHG G+
Sbjct: 572 TVIKTGCTSE-TEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGL 630
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF+ M + + P ++TF+ VL+AC+H G V EG YF M G P +HY+C+
Sbjct: 631 EALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACV 690
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
+D+LGRAG+L A + +E MP + ++ + AA + L+LEP ++
Sbjct: 691 VDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDS 750
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N YA +GKW +R++M+DRGV+K+PG SWIEVK +H F D HP+
Sbjct: 751 ASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAH 810
Query: 581 EIHNYLEEMSRKMKQAGYVP-------DKEKR-----LVHHSEKLAVAFGLLSTSYGEPI 628
+I+ YL ++ ++ + GY+ +KEK HSEKLAVAFGL+S P+
Sbjct: 811 QIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPL 870
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCH +KF S + GREI +RD YRFH F +G CSCGD+W
Sbjct: 871 RVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 250/482 (51%), Gaps = 23/482 (4%)
Query: 22 HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFS---------FNVLL 72
H ++ +VP LS+ C AA + HA V+ N L+
Sbjct: 132 HQMHCSGVVPTPYVLSSVL------SACTKAALFEQGRLVHAQVYKQGSCSETVVGNALI 185
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
A Y R ++ A ++F ++P D V++NTLIS +A CG+ ESAL +F++MR + D
Sbjct: 186 ALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245
Query: 133 TLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
T++ L+ AS +L KQLH + G + SLL Y + G + EA +F +
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF-KS 304
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
G+ + V WN M+VAYGQ + ++ LF +MV+ + + +T +L T ++ G
Sbjct: 305 GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q H IK+GF + ++ LID+Y+K G + ++ E + D+V W +MI+GY Q
Sbjct: 365 EQIHLLSIKTGFESDMYVSGVLIDMYSK-YGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
E+ +AL FK + G PD+ ISAC+ + G+QIH+ + + S +
Sbjct: 424 -HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHS-RVYVSGYSADV 481
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
S+ NALV +Y++CG ++A LF+ + + ++ N M++G+AQ G+ EAL +F M +
Sbjct: 482 SIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA 541
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ TFVS +SA A+ + +G++ + + G E E + +I L G+ G + D
Sbjct: 542 GVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIED 600
Query: 490 AE 491
A+
Sbjct: 601 AK 602
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 173/605 (28%), Positives = 296/605 (48%), Gaps = 49/605 (8%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ YA++ + AR++F+Q+ D VS+ ++S YA G E A+ L+ M
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 129 TDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+ LS +++A + L +Q +H G V N+L+ Y R G L A+R
Sbjct: 141 PTPYVLSSVLSACTKA-ALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAER 199
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
VF EM D V++N+++ + Q G AL++F+EM D T+AS+L A S+
Sbjct: 200 VFSEM-PYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
DL G Q H++L+K+G + I L+DLY KC G + + +++F+ + ++VLWN M+
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKC-GVIVEALEIFKSGDRTNVVLWNLML 317
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
Y Q + + ++ F ++ G P++ ++ C++ C+ +LG+QIH L+IK
Sbjct: 318 VAYGQISDLA-KSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF 376
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ + V+ L+ MYSK G L+ ARR+ + + + VS SMIAGY QH EAL F+
Sbjct: 377 ESD-MYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFK 435
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M I P NI S +SACA + +GQ+ S + + G+ + ++ +++L R
Sbjct: 436 DMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVY-VSGYSADVSIWNALVNLYARC 494
Query: 485 GKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
G+ +A L EA +E + + + + + +A SG +EE +
Sbjct: 495 GRSKEAFSLFEA------------------IEHKDKITWNGMVSGFAQSGLYEEALEVFI 536
Query: 545 LMRDRGVQ-----------KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
M GV+ + I+ KQ+H V + G E+ N L + K
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSE-TEVANALISLYGK- 594
Query: 594 KQAGYVPDKEKRLVHHSEKLAVAFGLLSTS-----YG-EPILVMKNLRICGDCHNAIKFI 647
G + D + + SE+ V++ + TS +G E + + ++ G N + FI
Sbjct: 595 --CGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFI 652
Query: 648 SAIAG 652
+A
Sbjct: 653 GVLAA 657
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 6/352 (1%)
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
L+ +H AI CG N L+ Y++ G + A+RVF ++ +D VSW +M+ Y
Sbjct: 60 LVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSA-RDNVSWVAMLSGY 118
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
++ G EA+ L+ +M + Y L+S+L+A T G HA + K G +
Sbjct: 119 ARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSET 178
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+G+ LI LY + G + +VF E+P D V +NT+IS ++Q + AL F+++
Sbjct: 179 VVGNALIALYLR-FGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGN-GESALEIFEEMR 236
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G+ PD + +++AC+++ + GKQ+H+ +K + + I + +L+ +Y KCG +
Sbjct: 237 LSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYI-IEGSLLDLYVKCGVI 295
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+A +F N V N M+ Y Q ++ LF M+ + P T+ +L C
Sbjct: 296 VEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTC 355
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G++ G++ ++ GFE + +ID+ + G L A R++E +
Sbjct: 356 TYAGEINLGEQ-IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL 406
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 267/730 (36%), Positives = 385/730 (52%), Gaps = 78/730 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C G + GK +H++ N V L + Y+ CG L F+
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 61 QHANVFSFNVLLAAYAR--------------------QLRIASARQLFDQIPQPDLVSYN 100
+ NV+ +N +++ YA+ R SA +LFD++ D++S+N
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 101 TLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYC 158
++IS Y G TE L ++K M D D T+ ++ A+S L L K +H LAI
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
F+ + +N+LL YS+ G LD A RVF +MGE ++ VSW SM+ Y + A++L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
Q+M + LD+ + SIL A L G H ++ + N + + L+D+YAK
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G M VF + D++ WNTMI PD +
Sbjct: 400 C-GSMEAANSVFSTMVVKDIISWNTMIGELK----------------------PDSRTMA 436
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
CV+ AC++LS GK+IH ++ S+R V NALV +Y KCG L AR LFD +P
Sbjct: 437 CVLPACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS MIAGY HG G EA+ F M + I P ++F+S+L AC+H+G + +G ++
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F +MK+ F EP+ EHY+CM+DLL R G L+ A +E +P P +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYH 615
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A K A +LEP N YV+LANIYA + KWEEV +R + +G++K PG SWI
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675
Query: 561 EVKKQMHVFVA-EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLV 607
E+K ++++FV+ + SHP K I + L++M RKMK+ G+ P KE L
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALC 735
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFGLL+ + I V KNLR+CGDCH KF+S REI +RD+ RFH FK
Sbjct: 736 GHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795
Query: 668 DGRCSCGDYW 677
DG CSC +W
Sbjct: 796 DGYCSCRGFW 805
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 220/510 (43%), Gaps = 98/510 (19%)
Query: 96 LVSYNTLISAYADCGDTESALSLF-----KDMREKRFD------------TDGFTLSGLI 138
+ YN I + GD E+A+ L ++ K + TDG + +I
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSII 125
Query: 139 TASSNNLCLIKQLHCLAIY--CG--------FDHYASVN----NSLLTCYSRNGFLDEAK 184
++S + L ++ Y CG FD N N +++ Y++ G E+
Sbjct: 126 KSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 185 RVFYEMGEI-------------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+F M E +D +SWNSM+ Y + L ++++M+ L
Sbjct: 186 CLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 245
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +D+ T+ S+L + L G H+ IKS F + + + L+D+Y+KC GD+
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDG 304
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++VFE++ + ++V W +MI+GY+ ++ SD A+ +++ + G D + ++ AC+
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYT-RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 346 NLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S SL GK +H + SN + V NAL+ MY+KCG++E A +F M + +S
Sbjct: 364 R-SGSLDNGKDVHDYIKANNMESN-LFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISW 421
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMK 462
N+MI + P + T VL ACA + G++ +++
Sbjct: 422 NTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILR 460
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVP 522
+ G+ + + ++DL + G L A L + +P + V
Sbjct: 461 N--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP------------------SKDLVS 500
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ ++ Y G E MRD G++
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/707 (37%), Positives = 393/707 (55%), Gaps = 66/707 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +LK C DL GK +H ++N F
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHG----------QLITNSFA-------------------- 179
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
ANVF+ ++ YA+ +I A ++FD++P+ DLVS+NT+I+ ++ G + AL L
Sbjct: 180 -ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 238
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+++ D TL ++ A+++ L+ K +H AI GF +++ +L YS+ G
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A+ +F M + K VSWNSM+ Y Q+ E +A+ +F++M+ + T+ L
Sbjct: 299 VETARLIFDGMDQ-KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L DL G H + + + + + LI +Y+KC + +F + V
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK-RVDIASDIFNNLNGRTHV 416
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHAL 358
WN MI GY+Q S +AL CF ++ +G PD + V VI A + LS + K IH L
Sbjct: 417 SWNAMILGYAQNGRVS-EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + N I V ALV MYSKCG + AR+LFD + + + ++ N+MI GY HG+G
Sbjct: 476 IIRSCLDKN-IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRA 534
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF+ M + + P +IT++SV+SAC+H+G V EG ++F MK +G EP +HY M+
Sbjct: 535 ALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMV 594
Query: 479 DLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAV 521
DLLGRAG++ +A IE MP +PG + KAA +L P
Sbjct: 595 DLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGG 654
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LANIYA++ KW +VA +R+ M +G++K PG S +E++ ++H F + +HP K
Sbjct: 655 YHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKR 714
Query: 582 IHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
I+ +LEE+ ++K AGYVPD +E+ L HSEKLA+AFGLL+TS G I V
Sbjct: 715 IYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHV 774
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCHNA K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 775 RKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 167/312 (53%), Gaps = 8/312 (2%)
Query: 148 IKQLH---CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+K+LH L I G + L++ +S+ G ++EA RVF + + D + +++M+
Sbjct: 62 MKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL-YHTMLK 120
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y ++ AL M + +Y +L DL G + H LI + F
Sbjct: 121 GYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA 180
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
N +G++++YAKC + D K+F+ +P+ DLV WNT+I+G+SQ ++ +AL +
Sbjct: 181 NVFAMTGVVNMYAKCR-QIDDAYKMFDRMPERDLVSWNTIIAGFSQ-NGFAKKALELVLR 238
Query: 325 LNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G PD + V V+ A +++ +GK IH I+ + ++++ AL MYSKCG
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF-AKLVNISTALADMYSKCG 297
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
++E AR +FD M + VS NSM+ GY Q+G +A+ +FE MLE I PT +T + L
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 444 ACAHTGKVAEGQ 455
ACA G + G+
Sbjct: 358 ACADLGDLERGK 369
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 193/379 (50%), Gaps = 7/379 (1%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L++ +++ I A ++F+ I Y+T++ YA E+AL+ MR
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 131 GFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ + L+ +N L K++H I F ++ Y++ +D+A ++F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M E +D VSWN+++ + Q+ +AL+L M D TL ++L A + L+
Sbjct: 207 RMPE-RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H + I++GF + +I + L D+Y+KC G + +F+ + Q +V WN+M+ GY
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKC-GSVETARLIFDGMDQKTVVSWNSMMDGY 324
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q E ++A+ F+K+ G P + + + AC++L GK +H ++ + S+
Sbjct: 325 VQNGE-PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSD 383
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
ISV N+L++MYSKC ++ A +F+ + VS N+MI GYAQ+G EAL F M
Sbjct: 384 -ISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 428 ETNIPPTNITFVSVLSACA 446
+ P + T VSV+ A A
Sbjct: 443 SLGMKPDSFTMVSVIPALA 461
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 41/311 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T + L C DL GK +H + + + N I +YSKC + A FN
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
S+N ++ YA+ R++ A F ++ +PD + ++I A A+ T A
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA- 469
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
K +H L I D V +L+ YS+
Sbjct: 470 --------------------------------KWIHGLIIRSCLDKNIFVTTALVDMYSK 497
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A+++F +M + ++WN+M+ YG H G AL LF +M + + T S
Sbjct: 498 CGAIHMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+++A + + GL+ F + G + ++DL + +G +++ E +P
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGR-AGRIKEAWDFIENMPI 615
Query: 295 QPDLVLWNTMI 305
P + ++ M+
Sbjct: 616 SPGITVYGAML 626
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QI L IK + + + LV+++SK G++ +A R+F+ + + ++M+ GYA++
Sbjct: 67 QIIPLVIKNGLYNEHL-FQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKN 125
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
AL M ++ P F +L C + G++ + F
Sbjct: 126 SSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN-SFAANVFA 184
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++++ + ++ DA ++ + MP
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMP 209
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/709 (35%), Positives = 378/709 (53%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C DL GK LH+ LK + F + LY KCG + AH FN
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLG 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV V +N ++ AY D + +F
Sbjct: 307 DRTNV-------------------------------VLWNLMLVAYGQISDLAKSFEIFG 335
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + FT ++ + + L +Q+H L+I GF+ V+ L+ YS+ G
Sbjct: 336 QMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYG 395
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A+++ EM E +D VSW SM+ Y QH EAL F+EM + D LAS
Sbjct: 396 CLDKARKIL-EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A ++ + GLQ HA + SG+ + I + L++LYA+C G + +F EI D
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC-GRSEEAFSLFREIEHKDE 513
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN +ISG+ Q Y QAL F K+ + G + +F+ ISA +NL+ GKQ+H
Sbjct: 514 ITWNGLISGFGQSRLYK-QALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K ++ V NAL+++Y KCG++EDA+ +F M N VS N++I +QHG G+
Sbjct: 573 RAVKTG-HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGL 631
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF+ M + + P ++TF+ VL+AC+H G V EG YF M +++G P +HY+C+
Sbjct: 632 EALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV 691
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
+D+LGRAG+L A R ++ MP ++ + AA H L+LEP ++
Sbjct: 692 VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDS 751
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N YA +GKW +R++M+DRG++K+PG SWIEVK +H F D HP+
Sbjct: 752 ASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSD 811
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ +L E++ ++ + GY + K+ HSEKLAVAFGL++ P+
Sbjct: 812 QIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPL 871
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCH+ +K S + REI +RD YRFH F G CSCGDYW
Sbjct: 872 RVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 219/425 (51%), Gaps = 8/425 (1%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ YA+ + ARQ+F ++ D VS+ ++S YA G + A L+ M
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS +++A + + +H F V N+L+ Y G A+RV
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M D V++N+++ + Q G ALQ+F EM L D T+AS+L A S+ D
Sbjct: 202 FCDM-LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L+K+G + L+DLY KC GD+ +F + ++VLWN M+
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC-GDIETAHDIFNLGDRTNVVLWNLMLV 319
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q + + ++ F ++ G HP+ ++ C++ C+ LG+QIH+L+IK
Sbjct: 320 AYGQISDLA-KSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK G L+ AR++ + + + + VS SMIAGY QH EAL F+
Sbjct: 379 SD-MYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + + P NI S SACA + +G + + + + G+ + ++ +++L R G
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY-VSGYAADISIWNTLVNLYARCG 496
Query: 486 KLTDA 490
+ +A
Sbjct: 497 RSEEA 501
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 239/495 (48%), Gaps = 17/495 (3%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV---------FS 67
+G A L + + ++A + ++L C A + HA V F
Sbjct: 122 SGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
N L+A Y A ++F + D V++NTLIS +A CG E AL +F +M+
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 128 DTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D T++ L+ AS +L KQLH + G SLL Y + G ++ A
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F +G+ + V WN M+VAYGQ + ++ ++F +M + + + +T IL T
Sbjct: 302 IF-NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G Q H+ IK+GF + ++ LID+Y+K G + K+ E + + D+V W +MI
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK-YGCLDKARKILEMLEKRDVVSWTSMI 419
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+GY Q ++ ++AL FK++ G PD+ SAC+ + G QIHA + +
Sbjct: 420 AGYVQ-HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA-RVYVSG 477
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ IS+ N LV +Y++CG E+A LF + + ++ N +I+G+ Q + +AL +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + TF+S +SA A+ + +G++ G E E + +I L G+
Sbjct: 538 KMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKC 596
Query: 485 GKLTDAERLIEAMPF 499
G + DA+ + M
Sbjct: 597 GSIEDAKMIFSEMSL 611
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 236/527 (44%), Gaps = 43/527 (8%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N L+ ++H ++ G + N L+ Y++NG + +A++VF E+ +D VSW +M
Sbjct: 57 NRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS-RDHVSWVAM 115
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ Y Q G EA +L+ +M + Y L+S+L+A T + G HA + K F
Sbjct: 116 LSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAF 175
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ +G+ LI LY G + +VF ++ D V +NT+ISG++Q + + AL F
Sbjct: 176 CSETFVGNALIALYLG-FGSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIF 233
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
++ G PD + +++AC+++ GKQ+H+ +K + + I+ +L+ +Y K
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT-EGSLLDLYVK 292
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG++E A +F+ N V N M+ Y Q ++ +F M T I P T+ +
Sbjct: 293 CGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCI 352
Query: 442 LSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
L C TG++ G++ S+ +K+ GFE + +ID+ + G L A +++E
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKN--GFESDMYVSGVLIDMYSKYGCLDKARKILE----- 405
Query: 501 PGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK------ 554
LE + V + + Y EE + M+D GV
Sbjct: 406 -------------MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 555 -----PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHH 609
G + Q+H V G I I N L + + ++ + + H
Sbjct: 453 AASACAGIKAMRQGLQIHARVYVSGYAADI-SIWNTLVNLYARCGRSEEAFSLFREIEHK 511
Query: 610 SE----KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
E L FG S Y + ++V + G +N FISAI+
Sbjct: 512 DEITWNGLISGFG-QSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 337 FVCVISAC---SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
C + AC N P L +IHA ++ + ++R+ + N L+ +Y+K G + AR++F
Sbjct: 45 LTCALQACRGRGNRWP-LVLEIHATSVVRGLGADRL-IGNLLIDLYAKNGLVWQARQVFK 102
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+ + VS +M++GYAQ G+G EA RL+ M T + PT SVLSAC A+
Sbjct: 103 ELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQ 162
Query: 454 GQ 455
G+
Sbjct: 163 GR 164
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/707 (37%), Positives = 393/707 (55%), Gaps = 66/707 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +LK C DL GK +H ++N F
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHG----------QLITNSFA-------------------- 179
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
ANVF+ ++ YA+ +I A ++FD++P+ DLVS+NT+I+ ++ G + AL L
Sbjct: 180 -ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 238
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+++ D TL ++ A+++ L+ K +H AI GF +++ +L YS+ G
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A+ +F M + K VSWNSM+ Y Q+ E +A+ +F++M+ + T+ L
Sbjct: 299 VETARLIFDGMDQ-KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L DL G H + + + + + LI +Y+KC + +F + V
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK-RVDIASDIFNNLNGRTHV 416
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHAL 358
WN MI GY+Q S +AL CF ++ +G PD + V VI A + LS + K IH L
Sbjct: 417 SWNAMILGYAQNGRVS-EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGL 475
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + N I V ALV MYSKCG + AR+LFD + + + ++ N+MI GY HG+G
Sbjct: 476 IIRSCLDKN-IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRA 534
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF+ M + + P +IT++SV+SAC+H+G V EG ++F MK +G EP +HY M+
Sbjct: 535 ALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMV 594
Query: 479 DLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAV 521
DLLGRAG++ +A IE MP +PG + KAA +L P
Sbjct: 595 DLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGG 654
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LANIYA++ KW +VA +R+ M +G++K PG S +E++ ++H F + +HP K
Sbjct: 655 YHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKR 714
Query: 582 IHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
I+ +LEE+ ++K AGYVPD +E+ L HSEKLA+AFGLL+TS G I V
Sbjct: 715 IYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHV 774
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCHNA K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 775 RKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 193/379 (50%), Gaps = 7/379 (1%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L++ +++ I A ++F+ I Y+T++ YA E+AL+ MR
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 131 GFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ + L+ +N L K++H I F ++ Y++ +D+A ++F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M E +D VSWN+++ + Q+ +AL+L M D TL ++L A + L+
Sbjct: 207 RMPE-RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H + I++GF + +I + L D+Y+KC G + +F+ + Q +V WN+M+ GY
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKC-GSVETARLIFDGMDQKTVVSWNSMMDGY 324
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q E ++A+ F+K+ G P + + + AC++L GK +H ++ + S+
Sbjct: 325 VQNGE-PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSD 383
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
ISV N+L++MYSKC ++ A +F+ + VS N+MI GYAQ+G EAL F M
Sbjct: 384 -ISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 428 ETNIPPTNITFVSVLSACA 446
+ P + T VSV+ A A
Sbjct: 443 SLGMKPDSFTMVSVIPALA 461
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 169/316 (53%), Gaps = 9/316 (2%)
Query: 145 LCL-IKQLH---CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
LC +K+LH L I G + L++ +S+ G ++EA RVF + + D + ++
Sbjct: 58 LCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL-YH 116
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Y ++ AL M + +Y +L DL G + H LI +
Sbjct: 117 TMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN 176
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
F N +G++++YAKC + D K+F+ +P+ DLV WNT+I+G+SQ ++ +AL
Sbjct: 177 SFAANVFAMTGVVNMYAKCR-QIDDAYKMFDRMPERDLVSWNTIIAGFSQ-NGFAKKALE 234
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMY 379
++ G PD + V V+ A +++ + GK IH I+ + ++++ AL MY
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF-AKLVNISTALADMY 293
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
SKCG++E AR +FD M + VS NSM+ GY Q+G +A+ +FE MLE I PT +T +
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353
Query: 440 SVLSACAHTGKVAEGQ 455
L ACA G + G+
Sbjct: 354 EALHACADLGDLERGK 369
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 41/307 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T + L C DL GK +H + + + N I +YSKC + A FN
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
S+N ++ YA+ R++ A F ++ +PD + ++I A A+ T A
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA- 469
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
K +H L I D V +L+ YS+
Sbjct: 470 --------------------------------KWIHGLIIRSCLDKNIFVTTALVDMYSK 497
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A+++F +M + ++WN+M+ YG H G AL LF +M + + T S
Sbjct: 498 CGAIHMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+++A + + GL+ F + G + ++DL + +G +++ E +P
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGR-AGRIKEAWDFIENMPI 615
Query: 295 QPDLVLW 301
P + ++
Sbjct: 616 SPGITVY 622
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QI L IK + + + LV+++SK G++ +A R+F+ + + ++M+ GYA++
Sbjct: 67 QIIPLVIKNGLYNEHL-FQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKN 125
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
AL M ++ P F +L C + G++ + F
Sbjct: 126 SSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN-SFAANVFA 184
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++++ + ++ DA ++ + MP
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMP 209
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/642 (38%), Positives = 375/642 (58%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
NVLL +Y R+ A LF++IP+ D V++NTLI+ Y G ++ LF MR+
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT SG++ A ++ L +QLH L++ GF ASV N +L YS++ + E + +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E+ D VS+N ++ +Y Q + +L F+EM + + A++L+ +L
Sbjct: 308 FDEMPEL-DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H + + H+G+ L+D+YAKC + +F+ +PQ V W +IS
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM-FEEAELIFKSLPQRTTVSWTALIS 425
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIR 365
GY QK + L F K+ D +F V+ A ++ S LGKQ+HA I+
Sbjct: 426 GYVQKGLHG-AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N S + LV MY+KCG+++DA ++F+ MP+ N VS N++I+ +A +G G A+ F
Sbjct: 485 ENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M+E+ + P +++ + VL+AC+H G V +G +YF M ++G P+ +HY+CM+DLLGR G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP-SNAVPYVMLA 527
+ +AE+L++ MPF P S+A +AA +E +A YV ++
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+G+WE+V +++ MR+RG++K P +SW+EV ++HVF + D +HP EI +
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKIN 723
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
E++ ++++ GY PD K + L +HSE+LAVAF L+ST G PI+VMKNLR
Sbjct: 724 ELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLR 783
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH AIK IS I REITVRDT RFH F +G CSCGDYW
Sbjct: 784 ACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 243/469 (51%), Gaps = 12/469 (2%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN + + G +SAA +++ H N S N +++ + + ++SAR LFD +P +
Sbjct: 51 SNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV 110
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDT--DGFTLSGLITASSNNLC--LIKQLH 152
V++ L+ YA + A LF+ M T D T + L+ ++ + + Q+H
Sbjct: 111 VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVH 170
Query: 153 CLAIYCGFDH--YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
A+ GFD + +V+N LL Y LD A +F E+ E KD V++N+++ Y +
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDG 229
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
E++ LF +M +T + +L A L D G Q HA + +GF +++ +G+
Sbjct: 230 LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN 289
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
++D Y+K + M +F+E+P+ D V +N +IS YSQ ++Y + +L F+++ +G+
Sbjct: 290 QILDFYSKHDRVLETRM-LFDEMPELDFVSYNVVISSYSQADQY-EASLHFFREMQCMGF 347
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
+ F ++S +NLS +G+Q+H + + + + V N+LV MY+KC E+A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+F +P+ TVS ++I+GY Q G+ L+LF M +N+ TF +VL A A
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ G++ + + E S ++D+ + G + DA ++ E MP
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP 514
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK L+ GK LHA +++ G L
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRS-------------------GNLE--------- 485
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFS + L+ YA+ I A Q+F+++P + VS+N LISA+AD GD E+A+ F
Sbjct: 486 ---NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN------------N 168
M E D ++ G++TA S HC + G +++ +++
Sbjct: 543 KMIESGLQPDSVSILGVLTACS---------HCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+L RNG EA+++ EM DE+ W+S++ A H+ A + +++ S++
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 378/647 (58%), Gaps = 48/647 (7%)
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
FN L++ Y+R + AR +FD++ D V++N++I+ Y G +F M+
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGV 291
Query: 128 DTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
T + +I AS L L+K + C A+ GF V +L+ S+ +D+A
Sbjct: 292 KPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALS 351
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA----F 241
+F M E K+ VSW +M+ Q+ +A+ LF +M + + +T ++ILT F
Sbjct: 352 LFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVF 411
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
S + HA +IK+ + ++S +G+ L+D Y K G+ D +KVFE I DL+ W
Sbjct: 412 VS--------EMHAEVIKTNYERSSSVGTALLDAYVKL-GNTIDAVKVFEIIEAKDLMAW 462
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHALT 359
+ M++GY+Q E +++A F +L + G P++ +F VI+AC++ + + GKQ HA
Sbjct: 463 SAMLAGYAQTGE-TEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYA 521
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK+ + +N + V++ALV MY+K GN++ A +F R E + VS NSMI+GY+QHG +A
Sbjct: 522 IKMRL-NNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKA 580
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L +F+ M + N+ +TF+ V++AC H G V +GQKYF+ M + P +HYSCMID
Sbjct: 581 LEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMID 640
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
L RAG L A +I MPF PG+ + AA + L+P ++
Sbjct: 641 LYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAA 700
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YAA+G W+E +R+LM R V+K+PG+SWIEVK + + F+A D +HP+ +I
Sbjct: 701 YVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQI 760
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
++ L E+S ++K AGY PD KE L HHSE+LA+AFGL++T PI +
Sbjct: 761 YSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQI 820
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+CGDCHN K +S + R I VRD+ RFH FKDG CSCGDYW
Sbjct: 821 VKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 234/476 (49%), Gaps = 35/476 (7%)
Query: 84 ARQLFDQIPQ--PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL--IT 139
A LFD+IP L +N L+ +Y+ T+ AL+LF + D TLS + I
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A S + L +Q+HC + G + SV SL+ Y + +++ +RVF EMGE ++ VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGE-RNVVSW 162
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG-GLQFHAHLI 258
S++ Y + +LF +M + + YT+++++ A + E +VG GLQ HA ++
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVN-EGVVGIGLQVHAMVV 221
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
K GF + + + LI LY++ G +RD VF+++ D V WN+MI+GY + + +
Sbjct: 222 KHGFEEAIPVFNSLISLYSRL-GMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQ-DLEV 279
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
F K+ G P +F VI +C++L +L K + +K +++I + +VA
Sbjct: 280 FEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVA 339
Query: 378 MYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+ SKC ++DA LF M E N VS +MI+G Q+G +A+ LF M + P +
Sbjct: 340 L-SKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHF 398
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T+ ++L+ V + + ++K +E + ++D + G DA ++ E
Sbjct: 399 TYSAILTVHY---PVFVSEMHAEVIKT--NYERSSSVGTALLDAYVKLGNTIDAVKVFEI 453
Query: 497 MPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+E + + + + YA +G+ EE A + + G++
Sbjct: 454 ------------------IEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 55/240 (22%)
Query: 1 TFRQVLKTCVGRRDLV-TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF V+ C GK HA +K + + +S+ + +Y+K G + +AH F +
Sbjct: 496 TFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ ++ S+N +++ Y++ G + AL +F
Sbjct: 556 QKERDLVSWNSMISGYSQH-------------------------------GQAKKALEVF 584
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS---------- 169
+M+++ D D T G+ITA + H + G ++ S+ N
Sbjct: 585 DEMQKRNMDVDAVTFIGVITACT---------HAGLVEKGQKYFNSMINDHHINPTMKHY 635
Query: 170 --LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE-MVSLQ 226
++ YSR G L++A + EM W +++ A HR +E +L E ++SLQ
Sbjct: 636 SCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHR-NVELGELAAEKLISLQ 694
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 379/647 (58%), Gaps = 37/647 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ N L+ AY + + A QLF + D V++N+L++ Y++ G E A+ LF ++
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
FT + L++A+ ++ +Q+H + F V N+LL YS++ +D
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
E ++F EM E+ D +S+N ++ +Y + + E+ LF+++ + + A++L+
Sbjct: 294 EVGKLFXEMPEL-DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA 352
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
TS +L G Q H I G + S + + L+D+YAKC+GD ++ K+F+ I V W
Sbjct: 353 TSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGD-KEAQKIFDNIACKSTVPW 411
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
MIS Y QK ++ ++ + F + R G D +F ++ AC+NL S SLG+Q+H+L I
Sbjct: 412 TAMISAYVQKGKH-EEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLI 470
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ SN S +AL+ Y+KCG + DA + F MPE N+VS N++I+ YAQ+G L
Sbjct: 471 RSGFMSNVYS-GSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTL 529
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
F+ M+++ P +++F+SVLSAC+H G V E +F+ M ++ P+ EHY+ M+D+
Sbjct: 530 NSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDV 589
Query: 481 LGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP-SNAVP 522
L R G+ +AE+L+ MPF P I A KAA+ +E +A P
Sbjct: 590 LCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAP 649
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
Y+ ++NIYA +G+W+ VA +++ MRDRGV+K P +SW+E+K Q HVF A D SHP +K+I
Sbjct: 650 YINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKI 709
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ +S++M++ GY PD K + L +HSE+ A+AF L++T G PI+V
Sbjct: 710 LRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVV 769
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
MKNLR C DCH AIK IS I REI VRD+ RFH FKDG CSCGDYW
Sbjct: 770 MKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 238/458 (51%), Gaps = 16/458 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L AH F+Q N S N++++ + + +++ AR+LFD + + VS+ LI Y
Sbjct: 57 GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHY 163
++ A L+ DMR + D TL L++ + N +I Q+H I G+++
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKN--VIVQIHTHVIKLGYEYN 174
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V NSL+ Y + L A ++F M KD V++NS++ Y EA++LF E+
Sbjct: 175 LMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ + +T A++L+A L+D G Q H ++K+ F N +G+ L+D Y+K +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK-HDQV 292
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS- 342
+ K+F E+P+ D + +N +I+ Y+ ++ ++ F+KL + F ++S
Sbjct: 293 DEVGKLFXEMPELDGISYNVVITSYAWNGQFK-ESFDLFRKLQFTRFDRRQFPFATLLSI 351
Query: 343 ACSNLSPSLGKQIH--ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
A S+L+ +G+QIH A+T+ S V NALV MY+KC ++A+++FD + +T
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESR---VENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
V +MI+ Y Q G E + +F M T +P TF S+L ACA+ ++ G++ S+
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ GF S ++D + G +TDA + MP
Sbjct: 469 LIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 41/311 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L +L G+ +H + F + + N + +Y+KC
Sbjct: 345 FATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG------------ 392
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A+++FD I V + +ISAY G E +++F D
Sbjct: 393 -------------------DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR D T + ++ A +N ++ L +QLH L I GF ++LL Y++ G
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGC 493
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A + F EM E ++ VSWN+++ AY Q+ L FQ+M+ D + S+L+
Sbjct: 494 MTDAIKSFGEMPE-RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + V +H + + + + H S ++D+ + +G + K+ E+P +
Sbjct: 553 ACSHC-GFVEEALWHFNSMTQIYEVTPKREHYTS-MVDVLCR-NGRFDEAEKLMTEMPFE 609
Query: 296 PDLVLWNTMIS 306
P ++W+++++
Sbjct: 610 PSEIMWSSVLN 620
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L+ C + G+ LH+L +++ + Y + + Y+KCGC++ A +F +
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM 504
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N S+N L++AYA+ + F Q+ Q PD VS+ +++SA + CG E AL
Sbjct: 505 PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + + +HY S+ + L R
Sbjct: 565 WHFNSMTQ----------------------------IYEVTPKREHYTSMVDVL----CR 592
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
NG DEA+++ EM E+ W+S++ + H+
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHK 626
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/642 (38%), Positives = 374/642 (58%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + ++ AR +F Q+ + DLVS+NT+IS A G E ++ +F D+
Sbjct: 945 NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLL 1004
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D FT++ ++ A S+ L Q+H A+ G + V+ +L+ YS++G ++EA+
Sbjct: 1005 PDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEF 1064
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F D SWN+M+ Y + +AL+L+ M + TLA+ A L
Sbjct: 1065 LFVNQDGF-DLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLV 1123
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L G Q A ++K GF+ + + SG++D+Y KC G+M ++F EIP PD V W TMI
Sbjct: 1124 GLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKC-GEMESARRIFNEIPSPDDVAWTTMI 1182
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG + + + AL + + PD+ +F ++ ACS L+ G+QIHA T+K+
Sbjct: 1183 SGCVENGQ-EEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNC 1241
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ V +LV MY+KCGN+EDAR LF R S N+MI G AQHG EAL+ FE
Sbjct: 1242 AFDPF-VMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFE 1300
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + P +TF+ VLSAC+H+G V+E + F M+ ++G EPE EHYSC++D L RA
Sbjct: 1301 EMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRA 1360
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G++ +AE++I +MPF + + A L LEPS++ YV+L+
Sbjct: 1361 GRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1420
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA+ +WE VA+ R +MR V+K PGFSW+++K ++H+FVA D SH I+N +E
Sbjct: 1421 NVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVE 1480
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+ +++++ GY+P DKE L +HSEKLA+A+GL+ T + V+KNLR
Sbjct: 1481 YIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLR 1540
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCHNAIK+IS + RE+ +RD RFH F+ G CSCGDYW
Sbjct: 1541 VCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 37/448 (8%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF L+ YA+ RI AR LFD + D+V +N ++ AY D G AL LF +
Sbjct: 761 DVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFN 820
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
D TL L + S N+ L QL L Y F+
Sbjct: 821 RTGLRPDDVTLCTLARVVKSKQNV-LEWQL-----------------KQLKAYGTKLFM- 861
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+ + + D ++WN + + Q E EA+ F +M++ ++ D T +L+
Sbjct: 862 -----YDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVV 916
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L L G Q H +++SG Q +G+ LI++Y K +G + VF ++ + DLV W
Sbjct: 917 AGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVK-TGSVSRARTVFWQMNEVDLVSW 975
Query: 302 NTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS--LGKQIHA 357
NTMISG S EE S +G F L R G PD + V+ ACS+L L QIHA
Sbjct: 976 NTMISGCALSGLEECS---VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHA 1032
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + + V+ L+ +YSK G +E+A LF + S N+M+ GY G
Sbjct: 1033 CAMKAGVVLDSF-VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFP 1091
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ALRL+ M E+ IT + A + +G++ +++ GF + S +
Sbjct: 1092 KALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKR-GFNLDLFVISGV 1150
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIA 505
+D+ + G++ A R+ +P +P +A
Sbjct: 1151 LDMYLKCGEMESARRIFNEIP-SPDDVA 1177
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 219/499 (43%), Gaps = 75/499 (15%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ + DL GK HA L + +L+N+ I +YSKCG LS
Sbjct: 632 ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLS------------- 678
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDM 122
SAR+LFD P DLV++N ++SA+AD LF+ +
Sbjct: 679 ------------------SARKLFDTTPDTSRDLVTWNAILSAHAD--KARDGFHLFRLL 718
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYS 175
R TL+ + +CL+ + LH A+ G V +L+ Y+
Sbjct: 719 RRSFVSATRHTLAPVF-----KMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYA 773
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + EA+ +F MG ++D V WN M+ AY EAL LF E L D TL
Sbjct: 774 KFGRIREARVLFDGMG-LRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLC 832
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++ S +++ L++ +K+ G+ L G
Sbjct: 833 TLARVVKSKQNV---LEWQLKQLKA-------YGTKLFMYDDDDDGS------------- 869
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQ 354
D++ WN +S + Q+ E + +A+ CF + D +FV ++S + L+ LGKQ
Sbjct: 870 -DVIAWNKTLSWFLQRGE-TWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH + ++ + +SV N L+ MY K G++ AR +F +M E + VS N+MI+G A G
Sbjct: 928 IHGIVVRSGL-DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSG 986
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ ++ +F +L + P T SVL AC+ G G +
Sbjct: 987 LEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046
Query: 475 SCMIDLLGRAGKLTDAERL 493
+ +ID+ ++GK+ +AE L
Sbjct: 1047 TTLIDVYSKSGKMEEAEFL 1065
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 8/223 (3%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SIL + DL G + HA ++ SG H + + + LI +Y+KC G + K+F+ P
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKC-GSLSSARKLFDTTPD 689
Query: 296 P--DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLG 352
DLV WN ++S ++ K + F+ L R + V C + SPS
Sbjct: 690 TSRDLVTWNAILSAHADK---ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H +KI ++ + + V ALV +Y+K G + +AR LFD M + V N M+ Y
Sbjct: 747 ESLHGYAVKIGLQWD-VFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVD 805
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
G+ EAL LF T + P ++T ++ V E Q
Sbjct: 806 TGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQ 848
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 11/237 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F + +L Y + + SAR++F++IP PD V++ T+IS + G E AL + MR
Sbjct: 1143 DLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMR 1202
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHC--LAIYCGFDHYASVNNSLLTCYSRNGF 179
+ D +T + L+ A S L +Q+H + + C FD + V SL+ Y++ G
Sbjct: 1203 LSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPF--VMTSLVDMYAKCGN 1260
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++A+ +F + SWN+M+V QH EALQ F+EM S + D T +L+
Sbjct: 1261 IEDARGLFKRTNTSR-IASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLS 1319
Query: 240 AFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A S LV F++ G S L+D ++ +G +R+ KV +P
Sbjct: 1320 A-CSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSR-AGRIREAEKVISSMP 1374
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 39/363 (10%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI-KDEVSW 199
++++L L K+ H + G + N+L+T YS+ G L A+++F + +D V+W
Sbjct: 638 AASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTW 697
Query: 200 NSMVVAYG-QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
N+++ A+ + R+G +L + + +TLA + H + +
Sbjct: 698 NAILSAHADKARDGFHLFRLLRRSF---VSATRHTLAPVFKMCLLSASPSAAESLHGYAV 754
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE-EYSDQ 317
K G + + L+++YAK G +R+ +F+ + D+VLWN M+ Y EY +
Sbjct: 755 KIGLQWDVFVAGALVNIYAKF-GRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY--E 811
Query: 318 ALGCFKKLNRVGYHPDD---CSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNA 374
AL F + NR G PDD C+ V+ + N+ KQ+ A K+
Sbjct: 812 ALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKL------------ 859
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
MY + D ++ N ++ + Q G EA+ F M+ + +
Sbjct: 860 --FMYDDDDDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACD 905
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+TFV +LS A + G++ ++ G + +C+I++ + G ++ A +
Sbjct: 906 GLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVF 964
Query: 495 EAM 497
M
Sbjct: 965 WQM 967
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C L G+ +HA +K F ++ + +Y+KCG + A F +T
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1271
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ + S+N ++ A+ A Q F+++ PD V++ ++SA + G A
Sbjct: 1272 NTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAY 1331
Query: 117 SLFKDMRE 124
F M++
Sbjct: 1332 ENFYSMQK 1339
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 266/729 (36%), Positives = 400/729 (54%), Gaps = 88/729 (12%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSA-----AHHAFNQTQHANVFSFN 69
+ G+ AL L N +P + +S + ++ GCLS A F + ++ S+N
Sbjct: 60 MRNGQCDSALRLFNSMPRRSSISWNAMI----SGCLSNDKFYLARQLFEKMPTRDLVSWN 115
Query: 70 VLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
V+++ R + +AR LFDQ+P+ D+VS+N ++S YA G + A +F +M K
Sbjct: 116 VMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK---- 171
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
+ + +G++ A N + ++ + N ++ Y + L +A+ +F
Sbjct: 172 NSISWNGMLAAYVQNGRIEDARRLFESKADWELISW--NCMMGGYVKRNRLVDARGIFDR 229
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M E +DEVSWN+M+ Y Q+ E LEA +LF+E D++T ++++ +
Sbjct: 230 MPE-RDEVSWNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQ-----N 279
Query: 250 GLQFHAHLIKSGF-HQNSHIGSGLIDLYAKC----------------------------- 279
G+ A + G +NS + +I Y +C
Sbjct: 280 GMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYA 339
Query: 280 -SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
+GD+ F+ +PQ D + W +I+GY+Q Y ++AL F ++ R G + +F
Sbjct: 340 QNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG-YGEEALHLFVEMKRDGERLNRSTFT 398
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
+S C+ ++ LGKQ+H +K + S V NAL+ MY KCGN++DA +F+ + E
Sbjct: 399 STLSTCAEIAALELGKQVHGRVVKAGLESG-CYVGNALLVMYCKCGNIDDAYIVFEGIEE 457
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
VS N+MIAGYA+HG G EAL LFE M +T I P ++T V VLSAC+HTG V +G +Y
Sbjct: 458 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 517
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F M +G +HY+CMIDLLGRAG+L DA+ L++ MPF P +
Sbjct: 518 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 577
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+ KAA ++EP N+ YV+L+N+YAASG+W +V +R MRDRGV+K PG+SW+
Sbjct: 578 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 637
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------KEKRLVH---- 608
EV+ ++H F D HP I+ +LEE+ KMK+ GYV +E+ VH
Sbjct: 638 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 697
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLAVAFG+L+ G PI V+KNLR+C DCHNA+K IS I GR I +RD++RFH F
Sbjct: 698 HSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNG 757
Query: 669 GRCSCGDYW 677
G+CSCGDYW
Sbjct: 758 GQCSCGDYW 766
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 103/261 (39%), Gaps = 41/261 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L TC L GK +H +K + Y+ N +++Y KCG + A+ F
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ V S+N ++A YAR A LF+ + + PD V+ ++SA + G +
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + G+ S + C+I L R
Sbjct: 516 EYFYSMTQD---------YGITANSKHYTCMIDLL-----------------------GR 543
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G LD+A+ + M D +W +++ A +G G +A ++ EM G MY
Sbjct: 544 AGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSG--MYV 601
Query: 234 LASILTAFTSLEDLVGGLQFH 254
L S L A + VG ++
Sbjct: 602 LLSNLYAASGRWGDVGRMRLR 622
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/644 (40%), Positives = 364/644 (56%), Gaps = 42/644 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ Y ++ A++LFD++ D++S+N++IS Y G + + +F M D
Sbjct: 290 NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVD 349
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNGFLDEAKR 185
D T+ + A +N L L K LH +I D NN+LL YS+ G L+ A R
Sbjct: 350 IDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIR 409
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLE--ALQLFQEMVSLQLGLDMYTLASILTAFTS 243
VF M E K VSW SM+ Y REGL A++LF EM S + D+Y + SIL A
Sbjct: 410 VFERMDE-KTVVSWTSMITGY--VREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAI 466
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+L G H ++ ++ NS + + L D+YAKC G M+D VF + + D++ WNT
Sbjct: 467 NGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC-GSMKDAHDVFSHMKKKDVISWNT 525
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
MI GY+ K ++AL F ++ R PD + C++ AC++L+ G++IH ++
Sbjct: 526 MIGGYT-KNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRN 583
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
++ V NA+V MY KCG L AR LFD +P + VS MIAGY HG G EA+
Sbjct: 584 GYSEDKY-VTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINT 642
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F M T I P ++F+S+L AC+H+G + EG K F++MK EP EHY+CM+DLL
Sbjct: 643 FNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLA 702
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
R G L A + I+AMP P + +A K A +LEP N YV+
Sbjct: 703 RTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVL 762
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
LANIYA + KWEEV +R+ + RG++K PG SWIE+K ++++FVA D S P K+I
Sbjct: 763 LANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELL 822
Query: 586 LEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L+ + KMK+ GY P +KE L HSEKLA+AFG+L+ G+ I V KN
Sbjct: 823 LKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKN 882
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH KF+S A REI +RD+ RFH FKDG CSC YW
Sbjct: 883 LRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 249/499 (49%), Gaps = 43/499 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ C R+ + G+ + ++ + V L + +Y KCG L
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLK------------- 202
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
R +FD++ + + +N +IS Y+ G+ +++LFK M E
Sbjct: 203 ------------------EGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE 244
Query: 125 KRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ +T S ++ A+ + +Q+H L GF+ Y +V NSL++ Y +
Sbjct: 245 LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRC 304
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+++F E+ + +D +SWNSM+ Y ++ +++F +M+ + +D+ T+ ++ A
Sbjct: 305 AQKLFDELTD-RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363
Query: 243 SLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
++ L+ G H++ IK+ + + L+D+Y+KC GD+ ++VFE + + +V W
Sbjct: 364 NIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKC-GDLNSAIRVFERMDEKTVVSW 422
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTI 360
+MI+GY +E SD A+ F ++ G PD + +++AC+ N + GK +H
Sbjct: 423 TSMITGYV-REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + +N V+NAL MY+KCG+++DA +F M + + +S N+MI GY ++ + EAL
Sbjct: 482 ENNLETNSF-VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEAL 540
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMID 479
LF M + P T +L ACA + +G++ +++ G+ + + ++D
Sbjct: 541 TLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHGYALRN--GYSEDKYVTNAVVD 597
Query: 480 LLGRAGKLTDAERLIEAMP 498
+ + G L A L + +P
Sbjct: 598 MYVKCGLLVLARSLFDMIP 616
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 5/396 (1%)
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
I + + GD ++A+ L + FD + + A ++ +++ + G
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI 183
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
+ L+ Y + G L E + VF ++ E K + WN M+ Y E++ LF++M
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFL-WNLMISEYSGSGNYGESINLFKQM 242
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ L + + YT +SIL F ++ + G Q H + K GF+ + + + LI Y
Sbjct: 243 LELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYF-VGRK 301
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+R K+F+E+ D++ WN+MISGY K D+ + F K+ G D + V V
Sbjct: 302 VRCAQKLFDELTDRDVISWNSMISGYV-KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFV 360
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
AC+N+ LGK +H+ +IK + NN L+ MYSKCG+L A R+F+RM E V
Sbjct: 361 ACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVV 420
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S SMI GY + G+ A++LF+ M + P S+L+ACA G + G+ +
Sbjct: 421 SWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI 480
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++ E + + D+ + G + DA + M
Sbjct: 481 REN-NLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 38/307 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C +L +GK +H +N + ++++SN +Y+KCG + AH F+ + +
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V S+N ++ Y + + +P AL+LF +M +
Sbjct: 520 VISWNTMIGGYTK-----------NSLPN--------------------EALTLFAEM-Q 547
Query: 125 KRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ DG T++ ++ A ++ L K ++H A+ G+ V N+++ Y + G L
Sbjct: 548 RESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVL 607
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F +M KD VSW M+ YG H G EA+ F +M + D + SIL A +
Sbjct: 608 ARSLF-DMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACS 666
Query: 243 SLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
L G + F+ + N + ++DL A+ +G++ K + +P +PD +
Sbjct: 667 HSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLAR-TGNLVKAHKFIKAMPIKPDATI 725
Query: 301 WNTMISG 307
W ++ G
Sbjct: 726 WGALLCG 732
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/694 (36%), Positives = 385/694 (55%), Gaps = 72/694 (10%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G +H + +KN + + +SN I LY KCG
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCG----------------------------- 243
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK--RFDTDGFTLS 135
+ AR LFD+ +V++N++IS YA G AL +F MR R F
Sbjct: 244 --NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ A+ L +QLHC + GF ++ +L+ YS+ + +A R+F E+G + +
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VSW +M+ + Q+ EA+ LF EM + + +T + ILTA ++ + HA
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHA 417
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
++K+ + ++S +G+ L+D Y K G + + KVF I D+V W+ M++GY+Q E +
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKL-GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE-T 475
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIKIEIRSNRISVNN 373
+ A+ F +L + G P++ +F +++ C +N S GKQ H IK + S+ + V++
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS-LCVSS 534
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL+ MY+K GN+E A +F R E + VS NSMI+GYAQHG M+AL +F+ M + +
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+TF+ V +AC H G V EG+KYF +M P EH SCM+DL RAG+L A ++
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 494 IEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKW 536
IE MP GS + AA + ++P ++ YV+L+N+YA SG W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
+E A +R+LM +R V+K+PG+SWIEVK + + F+A D SHP+ +I+ LE++S ++K
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY PD KE L HSE+LA+AFGL++T G P+L++KNLR+CGDCH I
Sbjct: 775 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVI 834
Query: 645 KFISAIAGREITVRDTYRFHCF-KDGRCSCGDYW 677
K I+ I REI VRD+ RFH F DG CSCGD+W
Sbjct: 835 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 213/391 (54%), Gaps = 11/391 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + R++FD++ + ++V++ TLIS YA + L+LF M+ + +
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 131 GFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT + + + + Q+H + + G D V+NSL+ Y + G + +A R+ +
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RILF 252
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E+K V+WNSM+ Y + LEAL +F M + L + AS++ +L++L
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
Q H ++K GF + +I + L+ Y+KC+ M D +++F+EI ++V W MISG
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA-MLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSN 367
+ Q + ++A+ F ++ R G P++ ++ +++A +SPS ++HA +K +
Sbjct: 372 FLQNDG-KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS---EVHAQVVKTNYERS 427
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+V AL+ Y K G +E+A ++F + + + V+ ++M+AGYAQ G A+++F +
Sbjct: 428 S-TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 428 ETNIPPTNITFVSVLSACAHT-GKVAEGQKY 457
+ I P TF S+L+ CA T + +G+++
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 186/372 (50%), Gaps = 14/372 (3%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
R+ +A LFD+ P D SY +L+ ++ G T+ A LF ++ + D S ++
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 140 ASSNNLC---LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
S+ LC +QLHC I GF SV SL+ Y + + ++VF EM E ++
Sbjct: 102 VSAT-LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE-RNV 159
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG--GLQFH 254
V+W +++ Y ++ E L LF M + + +T A+ L E+ VG GLQ H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA--EEGVGGRGLQVH 217
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
++K+G + + + LI+LY KC G++R +F++ +V WN+MISGY+
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKC-GNVRKARILFDKTEVKSVVTWNSMISGYAA-NGL 275
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+ALG F + + SF VI C+NL +Q+H +K ++ ++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRT 334
Query: 374 ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
AL+ YSKC + DA RLF + N VS +MI+G+ Q+ EA+ LF M +
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 433 PTNITFVSVLSA 444
P T+ +L+A
Sbjct: 395 PNEFTYSVILTA 406
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
IYC + +V++S L Y+ + D++ +D S+ S++ + + EA
Sbjct: 32 IYC----FGTVSSSRL--YNAHNLFDKSPG--------RDRESYISLLFGFSRDGRTQEA 77
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+LF + L + +D +S+L +L D + G Q H IK GF + +G+ L+D
Sbjct: 78 KRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDT 137
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y K S + +D KVF+E+ + ++V W T+ISGY+ + +D+ L F ++ G P+
Sbjct: 138 YMKGS-NFKDGRKVFDEMKERNVVTWTTLISGYA-RNSMNDEVLTLFMRMQNEGTQPNSF 195
Query: 336 SFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+F + + G Q+H + +K + I V+N+L+ +Y KCGN+ AR LFD+
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ V+ NSMI+GYA +G+ +EAL +F M + + +F SV+ CA+
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 266/707 (37%), Positives = 390/707 (55%), Gaps = 68/707 (9%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
V++T + L GK LHAL + +L+NH + +YSKCG L HA
Sbjct: 10 HVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELD---HAL------ 60
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+LFD +PQ +LVS+ +IS + A+ F MR
Sbjct: 61 ----------------------KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMR 98
Query: 124 EKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F S I AS ++ + KQ+HCLA+ G V ++L YS+ G +
Sbjct: 99 ICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMF 158
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A +VF EM KDEVSW +M+ Y + E EAL F++M+ ++ +D + L S L A
Sbjct: 159 DACKVFEEM-PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIPQPDLVL 300
+L+ G H+ ++K GF + +G+ L D+Y+K +GDM VF + ++V
Sbjct: 218 GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK-AGDMESASNVFGIDSECRNVVS 276
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+ +I GY + E+ ++ L F +L R G P++ +F +I AC+N + G Q+HA
Sbjct: 277 YTCLIDGYVETEQI-EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+KI + V++ LV MY KCG LE A + FD + + ++ NS+++ + QHG+G +A
Sbjct: 336 MKINFDEDPF-VSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+++FE M++ + P ITF+S+L+ C+H G V EG YF M +G P EHYSC+ID
Sbjct: 395 IKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 454
Query: 480 LLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVP 522
LLGRAG+L +A+ I MPF P + + AA ++LEP N+
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 514
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
V+L+NIYA +WE+V ++R MRD V+K PG+SW++V + HVF AED SHP I
Sbjct: 515 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAI 574
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+ + ++K AGYVP KEK L HSE++AVAF L+S G+PI+V
Sbjct: 575 YEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIV 634
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH+AIKFIS + GR+I VRD RFH F DG CSCGDYW
Sbjct: 635 KKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 22/324 (6%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D LA ++ + + L G Q HA LI +G+ + + + L+++Y+KC G++ +K+
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC-GELDHALKL 62
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-S 348
F+ +PQ +LV W MISG SQ ++S +A+ F + G P +F I AC++L S
Sbjct: 63 FDTMPQRNLVSWTAMISGLSQNSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+GKQ+H L +K I S + V + L MYSKCG + DA ++F+ MP + VS +MI
Sbjct: 122 IEMGKQMHCLALKFGIGS-ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GY++ G EAL F+ M++ + S L AC G+ S + + GFE
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFE 239
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLAN 528
+ + + D+ +AG + A + + E N V Y L +
Sbjct: 240 SDIFVGNALTDMYSKAGDMESASNVFG-----------------IDSECRNVVSYTCLID 282
Query: 529 IYAASGKWEEVATIRRLMRDRGVQ 552
Y + + E+ ++ +R +G++
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIE 306
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 185/421 (43%), Gaps = 45/421 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++ C + GK +H L LK + ++ ++ +YSKCG +
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAM----------- 157
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A ++F+++P D VS+ +I Y+ G+ E AL FK
Sbjct: 158 --------------------FDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKK 197
Query: 122 MREKRFDTDGFTL-SGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M ++ D L S L + C + +H + GF+ V N+L YS+ G
Sbjct: 198 MIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A VF E ++ VS+ ++ Y + + + L +F E+ + + +T +S++
Sbjct: 258 MESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + L G Q HA ++K F ++ + S L+D+Y KC G + ++ F+EI P +
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC-GLLEQAIQAFDEIGDPTEI 376
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALT 359
WN+++S + Q D A+ F+++ G P+ +F+ +++ CS+ G L
Sbjct: 377 AWNSLVSVFGQHGLGKD-AIKIFERMVDRGVKPNAITFISLLTGCSH----AGLVEEGLD 431
Query: 360 IKIEIRSNRISVN-----NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+ V + ++ + + G L++A+ +RMP E N S + H
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491
Query: 414 G 414
G
Sbjct: 492 G 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 42/212 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C + L G LHA +K ++S+ + +Y KCG L A A
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQA---- 366
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
FD+I P +++N+L+S + G + A+ +F+
Sbjct: 367 ---------------------------FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFE 399
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQL-------HCLAIYCGFDHYASVNNSLLTC 173
M ++ + T L+T S+ + + L + G +HY+ V + L
Sbjct: 400 RMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLL--- 456
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
R G L EAK M + W S + A
Sbjct: 457 -GRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/682 (39%), Positives = 379/682 (55%), Gaps = 84/682 (12%)
Query: 26 LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASAR 85
+++ V ++ +S+H + G +S A H F+ + S+N +LAAY R R+ AR
Sbjct: 128 VRDSVTYNVMISSH-----ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 182
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF+ + D++S+N L+S Y G A LF M + + +SG A ++
Sbjct: 183 GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGY--ARRGDM 240
Query: 146 CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
++L A + +V ++ Y++NG L+EA+RVF M E ++ VSWN+MV A
Sbjct: 241 VEARRLFDAAPVRDVFTWTAV----VSGYAQNGMLEEARRVFDAMPE-RNAVSWNAMVAA 295
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y Q R EA +LF M +AS T T G+ Q
Sbjct: 296 YIQRRMMDEAKELFNMMPC-------RNVASWNTMLT------------------GYAQ- 329
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+G + + VF+ +PQ D V W M++ YSQ S++ L F ++
Sbjct: 330 --------------AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG-CSEETLQLFIEM 374
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
R G + +F CV+S C++++ G Q+H I+ V NAL+AMY KCGN
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG-CFVGNALLAMYFKCGN 433
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EDAR F+ M E + VS N+MIAGYA+HG G EAL +F+ M T+ P +IT V VL+A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS- 503
C+H+G V +G YF M FG + EHY+CMIDLLGRAG+L +A L++ MPF P S
Sbjct: 494 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 553
Query: 504 ----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ AA +LEP NA YV+L+NIYA+SGKW + +R +M
Sbjct: 554 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 613
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
+RGV+K PGFSWIEV+ ++H F A D HP ++I+ +LE++ +MK+AGYV
Sbjct: 614 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLH 673
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+KE L +HSEKLAVA+G+L+ G PI V+KNLR+CGDCHNA K+ISAI GR I
Sbjct: 674 DVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLI 733
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
+RD+ RFH F+ G CSCGDYW
Sbjct: 734 LLRDSNRFHHFRGGSCSCGDYW 755
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 162/425 (38%), Gaps = 122/425 (28%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN I + + G ++ A F + ++N +LA Y+ R+ A LF IP+PD
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
SYNTL+ A A A LF +M + D T + +I++ +N+
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANH------------ 144
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G + A R ++++ KD VSWN M+ AY ++ EA
Sbjct: 145 ---------------------GLVSLA-RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 182
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
LF D+ + ++++ +
Sbjct: 183 GLFNSRTEW----DVISWNALMSGYVQW-------------------------------- 206
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
G M + ++F+ +P D+V WN M+SGY+++
Sbjct: 207 ----GKMSEARELFDRMPGRDVVSWNIMVSGYARR------------------------- 237
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
G + A + + A+V+ Y++ G LE+ARR+FD MP
Sbjct: 238 ---------------GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP 282
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
E N VS N+M+A Y Q + EA LF M N+ N ++L+ A G + E +
Sbjct: 283 ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWN----TMLTGYAQAGMLEEAKA 338
Query: 457 YFSMM 461
F M
Sbjct: 339 VFDTM 343
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL TC L G LH ++ ++ N + +Y KCG + A +AF +
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N ++A YAR A ++FD + +PD ++ +++A + G E +
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F M H + +HY ++ R
Sbjct: 505 SYFYSMH----------------------------HDFGVTAKPEHY----TCMIDLLGR 532
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLGLDMYT 233
G L EA + +M D W +++ A HR G A + E+ G MY
Sbjct: 533 AGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG--MYV 590
Query: 234 LASILTA 240
L S + A
Sbjct: 591 LLSNIYA 597
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/682 (39%), Positives = 379/682 (55%), Gaps = 84/682 (12%)
Query: 26 LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASAR 85
+++ V ++ +S+H + G +S A H F+ + S+N +LAAY R R+ AR
Sbjct: 3 VRDSVTYNVMISSH-----ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 57
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF+ + D++S+N L+S Y G A LF M + + +SG A ++
Sbjct: 58 GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGY--ARRGDM 115
Query: 146 CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
++L A + +V ++ Y++NG L+EA+RVF M E ++ VSWN+MV A
Sbjct: 116 VEARRLFDAAPVRDVFTWTAV----VSGYAQNGMLEEARRVFDAMPE-RNAVSWNAMVAA 170
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y Q R EA +LF M +AS T T G+ Q
Sbjct: 171 YIQRRMMDEAKELFNMMPC-------RNVASWNTMLT------------------GYAQ- 204
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+G + + VF+ +PQ D V W M++ YSQ S++ L F ++
Sbjct: 205 --------------AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG-CSEETLQLFIEM 249
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
R G + +F CV+S C++++ G Q+H I+ V NAL+AMY KCGN
Sbjct: 250 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG-CFVGNALLAMYFKCGN 308
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EDAR F+ M E + VS N+MIAGYA+HG G EAL +F+ M T+ P +IT V VL+A
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS- 503
C+H+G V +G YF M FG + EHY+CMIDLLGRAG+L +A L++ MPF P S
Sbjct: 369 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 428
Query: 504 ----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ AA +LEP NA YV+L+NIYA+SGKW + +R +M
Sbjct: 429 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 488
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
+RGV+K PGFSWIEV+ ++H F A D HP ++I+ +LE++ +MK+AGYV
Sbjct: 489 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLH 548
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+KE L +HSEKLAVA+G+L+ G PI V+KNLR+CGDCHNA K+ISAI GR I
Sbjct: 549 DVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLI 608
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
+RD+ RFH F+ G CSCGDYW
Sbjct: 609 LLRDSNRFHHFRGGSCSCGDYW 630
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL TC L G LH ++ ++ N + +Y KCG + A +AF +
Sbjct: 260 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 319
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N ++A YAR A ++FD + +PD ++ +++A + G E +
Sbjct: 320 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 379
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F M H + +HY ++ R
Sbjct: 380 SYFYSMH----------------------------HDFGVTAKPEHY----TCMIDLLGR 407
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLGLDMYT 233
G L EA + +M D W +++ A HR G A + E+ G MY
Sbjct: 408 AGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG--MYV 465
Query: 234 LASILTA 240
L S + A
Sbjct: 466 LLSNIYA 472
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 378/642 (58%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ +Y + R+ A QLF ++P+ D VSYN +I+ Y+ G E A++LF +M+
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + ++ A+ +++ L +Q+H I F V+N+LL YS++ + +A+++
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 307
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E +D VS+N ++ Y + A LF+E+ + A++L+ ++ D
Sbjct: 308 FDEMPE-QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 366
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G Q HA I + +G+ L+D+YAKC G + +F + V W MIS
Sbjct: 367 WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC-GKFEEAEMIFTNLTHRSAVPWTAMIS 425
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIR 365
Y QK Y ++ L F K+ + D +F ++ A +++ S SLGKQ+H+ IK
Sbjct: 426 AYVQKGFY-EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 484
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
SN S +AL+ +Y+KCG+++DA + F MP+ N VS N+MI+ YAQ+G L+ F+
Sbjct: 485 SNVFS-GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 543
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M+ + + P +++F+ VLSAC+H+G V EG +F+ M ++ +P EHY+ ++D+L R+G
Sbjct: 544 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSG 603
Query: 486 KLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP-SNAVPYVMLA 527
+ +AE+L+ MP +P I A +AA+ +E +A PYV ++
Sbjct: 604 RFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 663
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+G+WE V+ + + MRDRGV+K P +SW+E+K + H+F A D HP I+EI ++
Sbjct: 664 NIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKID 723
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+++ M++ GY PD K + L +HSE+LA+AF L+ST G PILVMKNLR
Sbjct: 724 MLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLR 783
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH AIK IS I GREITVRD+ RFH F+DG CSCGD+W
Sbjct: 784 ACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 237/465 (50%), Gaps = 8/465 (1%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN + + K G LS A F + H N S N++++ Y + + AR+LFD + +
Sbjct: 55 SNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTA 114
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCL 154
V++ LI Y+ + A LF M+ + D T L++ + + I Q+
Sbjct: 115 VTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 174
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
I G+D V N+L+ Y ++ LD A ++F EM EI D VS+N+M+ Y + +
Sbjct: 175 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI-DSVSYNAMITGYSKDGLDEK 233
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A+ LF EM + L +T A++L A L+D+V G Q H+ +IK+ F N + + L+D
Sbjct: 234 AVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLD 293
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
Y+K + D K+F+E+P+ D V +N +ISGY+ ++ A F++L +
Sbjct: 294 FYSK-HDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK-YAFDLFRELQFTAFDRKQ 351
Query: 335 CSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
F ++S SN L +G+QIHA TI + + I V N+LV MY+KCG E+A +F
Sbjct: 352 FPFATMLSIASNTLDWEMGRQIHAQTI-VTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+ + V +MI+ Y Q G E L+LF M + ++ TF S+L A A ++
Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G++ S + GF S ++D+ + G + DA + + MP
Sbjct: 471 GKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 514
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 215/495 (43%), Gaps = 76/495 (15%)
Query: 94 PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHC 153
PD N + + G+ A LF+ M K T S+
Sbjct: 50 PDTSRSNFRVGNFLKNGELSQARQLFEKMPHKN------------TVST----------- 86
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
N +++ Y ++G L EA+++F M E + V+W ++ Y Q +
Sbjct: 87 --------------NMMISGYVKSGNLGEARKLFDGMVE-RTAVTWTILIGGYSQLNQFK 131
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA +LF +M D T ++L+ E Q +IK G+ +G+ L+
Sbjct: 132 EAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLV 191
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
D Y K S + ++F+E+P+ D V +N MI+GYS K+ ++A+ F ++ G P
Sbjct: 192 DSYCK-SNRLDLACQLFKEMPEIDSVSYNAMITGYS-KDGLDEKAVNLFVEMQNSGLKPT 249
Query: 334 DCSFVCVISACSNLSPS---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
+ +F V+ C+N+ LG+QIH+ IK N + V+NAL+ YSK ++ DAR+
Sbjct: 250 EFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWN-VFVSNALLDFYSKHDSVIDARK 306
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
LFD MPE + VS N +I+GYA G A LF + T F ++LS ++T
Sbjct: 307 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 366
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAAN 510
G++ + + + E + ++D+ + GK +AE +
Sbjct: 367 WEMGRQIHAQTI-VTTADSEILVGNSLVDMYAKCGKFEEAEMI----------------- 408
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV-----------QKKPGFSW 559
F L +AVP+ + + Y G +EE + MR V + +
Sbjct: 409 -FTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 467
Query: 560 IEVKKQMHVFVAEDG 574
+ + KQ+H F+ + G
Sbjct: 468 LSLGKQLHSFIIKSG 482
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 52/222 (23%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L+ L GK LH+ +K S ++SN
Sbjct: 454 TFASLLRASASIASLSLGKQLHSFIIK-----SGFMSN---------------------- 486
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
VFS + LL YA+ I A Q F ++P ++VS+N +ISAYA G+ E+ L FK
Sbjct: 487 ----VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFK 542
Query: 121 DMREKRFDTDGFTLSGLITASS------------NNLCLIKQLHCLAIYCGFDHYASVNN 168
+M D + G+++A S N++ I +L +HYASV +
Sbjct: 543 EMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRR-----EHYASVVD 597
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
L C R+G +EA+++ EM DE+ W+S++ A H+
Sbjct: 598 ML--C--RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHK 635
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/735 (35%), Positives = 397/735 (54%), Gaps = 67/735 (9%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
+K C+G K +H ++ L +L N+ + Y+ A F+ N+
Sbjct: 10 IKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNL 69
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
FS+N LL AY++ ++ + F+++P D V++N LI Y+ G +A+ + M K
Sbjct: 70 FSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM-K 128
Query: 126 RFDTD--GFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F ++ TL ++ SS+N + L KQ+H I GF+ Y V + LL YS+ G +
Sbjct: 129 DFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCIS 188
Query: 182 EAKRVFYEM-----------------------------GEIKDEVSWNSMVVAYGQHREG 212
+AK+VFY + G KD VSW++M+ Q+
Sbjct: 189 DAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGME 248
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EA++ F+EM L +D Y S+L A L + G Q HA +I++ + ++GS L
Sbjct: 249 KEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSAL 308
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID+Y KC + VF+ + Q ++V W M+ GY Q + +A+ F + R G P
Sbjct: 309 IDMYCKCKC-LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR-AGEAVKIFLDMQRSGIDP 366
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D + ISAC+N+S G Q H I + + I+V+N+LV +Y KCG+++D+ RL
Sbjct: 367 DHYTLGQAISACANISSLEEGSQFHGKAITAGL-IHYITVSNSLVTLYGKCGDIDDSTRL 425
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F+ M + VS +M++ YAQ G +EA++LF+ M++ + P +T V+SAC+ G V
Sbjct: 426 FNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLV 485
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK---- 507
+GQ+YF +M + +G P HYSCMIDL R+G++ +A I MPF P +I
Sbjct: 486 EKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545
Query: 508 -------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
AA ++L+P + Y +L++IYA+ GKW+ VA +RR M+++ V+K+
Sbjct: 546 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKE 605
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------K 602
PG SWI+ K ++H F A+D S P +I+ LEE+ +K+ GY PD K
Sbjct: 606 PGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVK 665
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
K L HSE+LA+AFGL+ G PI V KNLR+C DCHNA K IS++ GREI VRD R
Sbjct: 666 IKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 725
Query: 663 FHCFKDGRCSCGDYW 677
FH FKDG CSCGD+W
Sbjct: 726 FHRFKDGTCSCGDFW 740
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 37/314 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C G + G+ +HA ++ + Y+ + I +Y KC CL A F++ +
Sbjct: 270 FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV S+ ++ Y + G A+ +F D
Sbjct: 330 QKNVVSWTAMVVGYGQT-------------------------------GRAGEAVKIFLD 358
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D D +TL I+A +N L + Q H AI G HY +V+NSL+T Y + G
Sbjct: 359 MQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGD 418
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D++ R+F EM ++DEVSW +MV AY Q +EA+QLF +MV L L D TL +++
Sbjct: 419 IDDSTRLFNEM-NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVIS 477
Query: 240 AFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
A + + G ++ +I G ++ S +IDL+++ SG + + M +P +PD
Sbjct: 478 ACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSR-SGRIEEAMGFINGMPFRPD 536
Query: 298 LVLWNTMISGYSQK 311
+ W T++S K
Sbjct: 537 AIGWTTLLSACRNK 550
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 267/730 (36%), Positives = 386/730 (52%), Gaps = 78/730 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C G + L GK +H++ N V L + Y+ CG L F+
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 61 QHANVFSFNVLLAAYAR--------------------QLRIASARQLFDQIPQPDLVSYN 100
+ NV+ +N +++ YA+ R SA +LFD++ D++S+N
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 101 TLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYC 158
++IS Y G TE L ++K M D D T+ ++ A+S L L K +H LAI
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
F+ + +N+LL YS+ G LD A RVF +MGE ++ VSW SM+ Y + A+ L
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGWSDGAIIL 339
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
Q+M + LD+ + SIL A L G H ++ + N + + L+D+YAK
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 399
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G M VF + D++ WNTM+ PD +
Sbjct: 400 C-GSMEGANSVFSTMVVKDIISWNTMVGELK----------------------PDSRTMA 436
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
C++ AC++LS GK+IH ++ S+R V NALV +Y KCG L AR LFD +P
Sbjct: 437 CILPACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS MIAGY HG G EA+ F M + I P ++F+S+L AC+H+G + +G ++
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F +MK+ F EP+ EHY+CM+DLL R G L+ A + IE +P P +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYH 615
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A K A +LEP N YV+LANIYA + K EEV +R + +G++K PG SWI
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWI 675
Query: 561 EVKKQMHVFVA-EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLV 607
E+K ++++FV+ + SHP K+I + L++M RKMK+ GY P KE L
Sbjct: 676 EIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALC 735
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFGLL+ + I V KNLR+CGDCH KF+S REI +RD+ RFH FK
Sbjct: 736 GHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795
Query: 668 DGRCSCGDYW 677
DG CSC +W
Sbjct: 796 DGYCSCRGFW 805
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/510 (22%), Positives = 216/510 (42%), Gaps = 98/510 (19%)
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA 155
+ YN I + GD E+A+ L ++ +T + + A +L K++H +
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSII 125
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM------------------GEIK--- 194
++ L++ Y+ G L E +RVF M G+ K
Sbjct: 126 KSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 195 -----------------------------DEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
D +SWNSM+ Y + L ++++M+ L
Sbjct: 186 CLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 245
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +D+ T+ S+L + L G H+ IKS F + + + L+D+Y+KC GD+
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDG 304
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++VFE++ + ++V W +MI+GY+ ++ +SD A+ +++ + G D + ++ AC+
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYT-RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACA 363
Query: 346 NLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S SL GK +H IK ++ + V NAL+ MY+KCG++E A +F M + +S
Sbjct: 364 R-SGSLDNGKDVHDY-IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISW 421
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMK 462
N+M+ + P + T +L ACA + G++ +++
Sbjct: 422 NTMVG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYILR 460
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVP 522
+ G+ + + ++DL + G L A L + +P + V
Sbjct: 461 N--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP------------------SKDLVS 500
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ ++ Y G E MRD G++
Sbjct: 501 WTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/682 (39%), Positives = 378/682 (55%), Gaps = 84/682 (12%)
Query: 26 LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASAR 85
+++ V ++ +S+H + G +S A H F+ + S+N +LAAY R R+ AR
Sbjct: 128 VRDSVTYNVMISSH-----ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 182
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF+ + D +S+N L+S Y G A LF M + + +SG A ++
Sbjct: 183 GLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGY--ARRGDM 240
Query: 146 CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
++L A + +V ++ Y++NG L+EA+RVF M E ++ VSWN+MV A
Sbjct: 241 VEARRLFDAAPVRDVFTWTAV----VSGYAQNGMLEEARRVFDAMPE-RNAVSWNAMVAA 295
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y Q R EA +LF M +AS T T G+ Q
Sbjct: 296 YIQRRMMDEAKELFNMMPC-------RNVASWNTMLT------------------GYAQ- 329
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+G + + VF+ +PQ D V W M++ YSQ S++ L F ++
Sbjct: 330 --------------AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG-CSEETLQLFIEM 374
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
R G + +F CV+S C++++ G Q+H I+ V NAL+AMY KCGN
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG-CFVGNALLAMYFKCGN 433
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EDAR F+ M E + VS N+MIAGYA+HG G EAL +F+ M T+ P +IT V VL+A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS- 503
C+H+G V +G YF M FG + EHY+CMIDLLGRAG+L +A L++ MPF P S
Sbjct: 494 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 553
Query: 504 ----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ AA +LEP NA YV+L+NIYA+SGKW + +R +M
Sbjct: 554 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 613
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
+RGV+K PGFSWIEV+ ++H F A D HP ++I+ +LE++ +MK+AGYV
Sbjct: 614 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLH 673
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+KE L +HSEKLAVA+G+L+ G PI V+KNLR+CGDCHNA K+ISAI GR I
Sbjct: 674 DVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLI 733
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
+RD+ RFH F+ G CSCGDYW
Sbjct: 734 LLRDSNRFHHFRGGSCSCGDYW 755
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 176/391 (45%), Gaps = 57/391 (14%)
Query: 12 RRDLVTGKSL-HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNV 70
R D+V + L A ++++ ++A +S Y++ G L A F+ N S+N
Sbjct: 237 RGDMVEARRLFDAAPVRDVFTWTAVVSG-----YAQNGMLEEARRVFDAMPERNAVSWNA 291
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
++AAY ++ + A++LF+ +P ++ S+NT+++ YA G E A ++F M +K D
Sbjct: 292 MVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----D 347
Query: 131 GFTLSGLITASSNNLCLIK-------------------------------------QLHC 153
+ + ++ A S C + QLH
Sbjct: 348 AVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 407
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
I G+ V N+LL Y + G +++A+ F EM E +D VSWN+M+ Y +H G
Sbjct: 408 RLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE-RDVVSWNTMIAGYARHGFGK 466
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGL 272
EAL++F M + D TL +L A + + G+ F++ G + +
Sbjct: 467 EALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCM 526
Query: 273 IDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
IDL + +G + + + +++P +PD +W ++ G S+ + +K+ +
Sbjct: 527 IDLLGR-AGRLAEAHDLMKDMPFEPDSTMWGALL-GASRIHRNPELGRSAAEKIFEL--E 582
Query: 332 PDDCSFVCVISACSNLSPSLGKQIHALTIKI 362
P++ ++ SN+ S GK A +++
Sbjct: 583 PENAGMYVLL---SNIYASSGKWRDARKMRV 610
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 161/425 (37%), Gaps = 122/425 (28%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN I + + G ++ A F + ++N +LA Y+ R+ A LF IP+PD
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
SYNTL+ A A A LF +M + D T + +I++ +N+
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANH------------ 144
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G + A R ++++ KD VSWN M+ AY ++ EA
Sbjct: 145 ---------------------GLVSLA-RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 182
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
LF D + ++++ +
Sbjct: 183 GLFNSRTEW----DAISWNALMSGYVQW-------------------------------- 206
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
G M + ++F+ +P D+V WN M+SGY+++
Sbjct: 207 ----GKMSEARELFDRMPGRDVVSWNIMVSGYARR------------------------- 237
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
G + A + + A+V+ Y++ G LE+ARR+FD MP
Sbjct: 238 ---------------GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP 282
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
E N VS N+M+A Y Q + EA LF M N+ N ++L+ A G + E +
Sbjct: 283 ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWN----TMLTGYAQAGMLEEAKA 338
Query: 457 YFSMM 461
F M
Sbjct: 339 VFDTM 343
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL TC L G LH ++ ++ N + +Y KCG + A +AF +
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N ++A YAR A ++FD + +PD ++ +++A + G E +
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F M H + +HY ++ R
Sbjct: 505 SYFYSMH----------------------------HDFGVTAKPEHY----TCMIDLLGR 532
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLGLDMYT 233
G L EA + +M D W +++ A HR G A + E+ G MY
Sbjct: 533 AGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG--MYV 590
Query: 234 LASILTA 240
L S + A
Sbjct: 591 LLSNIYA 597
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/642 (38%), Positives = 372/642 (57%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + ++ AR +F Q+ + DL+S+NT+IS G E ++ +F +
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D FT++ ++ A S+ L Q+H A+ G + V+ +L+ YS+ G ++EA+
Sbjct: 1034 PDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEF 1093
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F D SWN+++ Y + +AL+L+ M D TL + A L
Sbjct: 1094 LFVNQDGF-DLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLV 1152
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L G Q HA ++K GF+ + + SG++D+Y KC G+M +VF EIP PD V W TMI
Sbjct: 1153 GLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKC-GEMESARRVFSEIPSPDDVAWTTMI 1211
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG + + + AL + ++ PD+ +F ++ ACS L+ G+QIHA +K+
Sbjct: 1212 SGCVENGQ-EEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNC 1270
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ V +LV MY+KCGN+EDAR LF R S N+MI G AQHG EAL+ F+
Sbjct: 1271 AFDPF-VMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFK 1329
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
+M + P +TF+ VLSAC+H+G V+E + F M+ +G EPE EHYSC++D L RA
Sbjct: 1330 YMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRA 1389
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G++ +AE++I +MPF + + A L LEPS++ YV+L+
Sbjct: 1390 GRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1449
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA+ +WE VA+ R +MR V+K PGFSW+++K ++H+FVA D SH I+N +E
Sbjct: 1450 NVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVE 1509
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+ +++++ GYVP DKE L +HSEKLA+A+GL+ T + V+KNLR
Sbjct: 1510 YIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLR 1569
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH+AIK+IS + REI +RD RFH F++G CSCGDYW
Sbjct: 1570 VCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 252/548 (45%), Gaps = 64/548 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V K C+ +SLH +K + + +++ + +Y+K G + A F+
Sbjct: 762 TLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGM 821
Query: 61 QHANVFSFNVLLAAYA---------------------------RQL-RIASARQLFDQIP 92
+V +NV++ AY R L R+ ++ ++
Sbjct: 822 AVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELK 881
Query: 93 Q---------------PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
Q D++ +N +S + G+ A+ F DM R DG T +
Sbjct: 882 QFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVM 941
Query: 138 IT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+T A N L L KQ+H + + G D SV N L+ Y + G + A+ VF +M E+ D
Sbjct: 942 LTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEV-D 1000
Query: 196 EVSWNSMVVAYGQHREGLE--ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG--- 250
+SWN+M+ G GLE ++ +F ++ L D +T+AS+L A +SLE GG
Sbjct: 1001 LISWNTMI--SGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE---GGYYL 1055
Query: 251 -LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
Q HA +K+G +S + + LID+Y+K G M + +F DL WN ++ GY
Sbjct: 1056 ATQIHACAMKAGVVLDSFVSTALIDVYSK-RGKMEEAEFLFVNQDGFDLASWNAIMHGYI 1114
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNR 368
++ +AL + + G D + V A L GKQIHA+ +K +
Sbjct: 1115 VSGDFP-KALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLD- 1172
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V + ++ MY KCG +E ARR+F +P + V+ +MI+G ++G AL + M
Sbjct: 1173 LFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRL 1232
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + P TF +++ AC+ + +G Q + +++K F+P + ++D+ + G +
Sbjct: 1233 SKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNI 1290
Query: 488 TDAERLIE 495
DA L +
Sbjct: 1291 EDARGLFK 1298
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 206/448 (45%), Gaps = 41/448 (9%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF L+ YA+ I AR LFD + D+V +N ++ AY D A+ LF +
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F D TL L + N+ +KQ F YA+
Sbjct: 854 RTGFRPDDVTLRTLSRVVKCKKNILELKQ---------FKAYAT---------------- 888
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
++F + D + WN + + Q E EA+ F +M++ ++ D T +LT
Sbjct: 889 ---KLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV 945
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L L G Q H +++SG Q +G+ LI++Y K +G + VF ++ + DL+ W
Sbjct: 946 AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVK-AGSVSRARSVFGQMNEVDLISW 1004
Query: 302 NTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS--LGKQIHA 357
NTMISG S EE S +G F L R PD + V+ ACS+L L QIHA
Sbjct: 1005 NTMISGCTLSGLEECS---VGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHA 1061
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + + V+ AL+ +YSK G +E+A LF + S N+++ GY G
Sbjct: 1062 CAMKAGVVLDSF-VSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFP 1120
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ALRL+ M E+ IT V+ A + +G++ +++ GF + S +
Sbjct: 1121 KALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKR-GFNLDLFVTSGV 1179
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIA 505
+D+ + G++ A R+ +P +P +A
Sbjct: 1180 LDMYLKCGEMESARRVFSEIP-SPDDVA 1206
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 221/502 (44%), Gaps = 82/502 (16%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ + DL GK HA L + +++N+ I +Y+KCG L
Sbjct: 662 ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSL-------------- 707
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGD-TESALSLFKD 121
+SAR+LFD P DLV++N ++SA A D + LF+
Sbjct: 708 -----------------SSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRL 750
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCY 174
+R T TL+ + +CL+ + LH A+ G V +L+ Y
Sbjct: 751 LRRSVVSTTRHTLAPVF-----KMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIY 805
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G + EA RV ++ ++D V WN M+ AY EA+ LF E D TL
Sbjct: 806 AKFGLIREA-RVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++ ++++ QF A+ K + + GS
Sbjct: 865 RTLSRVVKCKKNILELKQFKAYATKLFMYDDD--GS------------------------ 898
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGK 353
D+++WN +S + Q+ E + +A+ CF + D +FV +++ + L+ LGK
Sbjct: 899 --DVIVWNKALSRFLQRGE-AWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGK 955
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIH + ++ + +SV N L+ MY K G++ AR +F +M E + +S N+MI+G
Sbjct: 956 QIHGIVMRSGL-DQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLS 1014
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACA--HTGKVAEGQKYFSMMKDMFGFEPEG 471
G+ ++ +F +L ++ P T SVL AC+ G Q + MK G +
Sbjct: 1015 GLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMK--AGVVLDS 1072
Query: 472 EHYSCMIDLLGRAGKLTDAERL 493
+ +ID+ + GK+ +AE L
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFL 1094
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SIL + DL G + HA ++ SG H + + + LI +YAKC G + K+F+ P
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKC-GSLSSARKLFDTTPD 719
Query: 296 P--DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLG 352
DLV WN ++S + + S F+ L R + V C + SPS
Sbjct: 720 TNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H +KI ++ + + V ALV +Y+K G + +AR LFD M + V N M+ Y
Sbjct: 780 ESLHGYAVKIGLQWD-VFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+ EA+ LF T P ++T ++ + E +++ + +F ++ +G
Sbjct: 839 TCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDG 897
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T K G L GK +HA+ +K ++++ + +Y KCG
Sbjct: 1140 TLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCG------------ 1187
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR++F +IP PD V++ T+IS + G E AL +
Sbjct: 1188 -------------------EMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYH 1228
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHC--LAIYCGFDHYASVNNSLLTCYSR 176
MR + D +T + L+ A S L +Q+H + + C FD + V SL+ Y++
Sbjct: 1229 QMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPF--VMTSLVDMYAK 1286
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A+ +F + + SWN+M+V QH EALQ F+ M S + D T
Sbjct: 1287 CGNIEDARGLF-KRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIG 1345
Query: 237 ILTA 240
+L+A
Sbjct: 1346 VLSA 1349
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C L G+ +HA +K F ++ + +Y+KCG + A F +T
Sbjct: 1241 TFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1300
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ S+N ++ A+ A Q F + PD V++ ++SA + G A
Sbjct: 1301 NTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAY 1360
Query: 117 SLFKDMRE 124
F M++
Sbjct: 1361 ENFYSMQK 1368
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 373/647 (57%), Gaps = 37/647 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NVF+ ++ YA+ + A ++FD++P+ DLV +NT+IS YA G ++AL L M
Sbjct: 208 SNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRM 267
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+E+ D T+ ++ A ++ +L + + +H ++ GF+ + +V+ +L+ YS+ G +
Sbjct: 268 QEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSV 327
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ +F M K VSWNSM+ Y Q+ + A+++FQ+M+ Q+ + T+ L A
Sbjct: 328 GTARLIFDRMTG-KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHA 386
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L D+ G H L + + + + LI +Y+KC + ++FE + LV
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCK-RVDIAAEIFENLQHKTLVS 445
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS--PSLGKQIHAL 358
WN MI GY+Q ++A+ F K+ PD + V VI A + LS P K IH L
Sbjct: 446 WNAMILGYAQNGRI-NEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQ-AKWIHGL 503
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + N + V ALV MY+KCG + AR+LFD M E + + N+MI GY HG+G
Sbjct: 504 VIRTCLDKN-VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKA 562
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LFE M + I P +TF+ VLSAC+H+G V EG +YF MK +G EP +HY M+
Sbjct: 563 ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMV 622
Query: 479 DLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAV 521
DLLGRA +L +A I+ MP P + KAAN L+P +
Sbjct: 623 DLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGG 682
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LANIYA + W++VA +R M +G+QK PG+S +E++ ++H F + SHP K+
Sbjct: 683 YHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKK 742
Query: 582 IHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
I+ +LE + ++K AGY+PD KE+ L HSEKLA+AF LL+TS G I +
Sbjct: 743 IYAFLETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHL 802
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCHNA K+IS + REI VRD RFH FKDG CSCGDYW
Sbjct: 803 RKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 212/436 (48%), Gaps = 20/436 (4%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L++ + + + A ++F I Y+T++ YA + A+S F MR
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 131 GFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ + L+ +N L K ++HC I GF ++ Y++ ++EA ++F
Sbjct: 175 VYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M E +D V WN+++ Y Q+ G AL+L M D T+ SIL A + L
Sbjct: 235 RMPE-RDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H + +++GF ++ + L+D+Y+KC G + +F+ + +V WN+MI GY
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKC-GSVGTARLIFDRMTGKTVVSWNSMIDGY 352
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q + A+ F+K+ + + + + AC++L G+ +H L ++E+ S+
Sbjct: 353 VQNGD-PGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSD 411
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+SV N+L++MYSKC ++ A +F+ + VS N+MI GYAQ+G EA+ F M
Sbjct: 412 -VSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM------KDMFGFEPEGEHYSCMIDLL 481
NI P + T VSV+ A A + + + ++ K++F + ++D+
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFV-------ATALVDMY 523
Query: 482 GRAGKLTDAERLIEAM 497
+ G + A +L + M
Sbjct: 524 AKCGAVHTARKLFDMM 539
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 159/349 (45%), Gaps = 38/349 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L L G+S+H ++ +S + +YSKCG + A F++
Sbjct: 278 TIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRM 337
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
V S+N ++I Y GD +A+ +F+
Sbjct: 338 TGKTVVSWN-------------------------------SMIDGYVQNGDPGAAMEIFQ 366
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M +++ + T+ G + A + +L ++Q +H L SV NSL++ YS+
Sbjct: 367 KMMDEQVEMTNVTVMGALHACA-DLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKC 425
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+D A +F + + K VSWN+M++ Y Q+ EA+ F +M + D +T+ S+
Sbjct: 426 KRVDIAAEIFENL-QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSV 484
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ A L L H +I++ +N + + L+D+YAKC G + K+F+ + +
Sbjct: 485 IPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKC-GAVHTARKLFDMMDERH 543
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ WN MI GY AL F+K+ + P++ +F+CV+SACS+
Sbjct: 544 VTTWNAMIDGYGT-HGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSH 591
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 135/266 (50%), Gaps = 12/266 (4%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A +L TS+++L QF +IK+G + + L+ L+ K G + + +VF+ I
Sbjct: 81 AILLELCTSMKEL---HQFIPLIIKNGLYSEHLFQTKLVSLFCKF-GSLHEAARVFQPIE 136
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGK 353
L++TM+ GY++ D A+ F ++ G P +F ++ C N GK
Sbjct: 137 DKIDELYHTMLKGYARNSSL-DDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGK 195
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IH I SN ++ +V MY+KC +E+A ++FDRMPE + V N++I+GYAQ+
Sbjct: 196 EIHCQLIVNGFASNVFAMT-GVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQN 254
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEG 471
G G AL L M E P +IT VS+L A A G + G+ +SM GFE
Sbjct: 255 GFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRA---GFESFV 311
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ + G + A + + M
Sbjct: 312 NVSTALVDMYSKCGSVGTARLIFDRM 337
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L K +H L ++ + + +++ + +Y+KCG + A F+ +V ++N ++
Sbjct: 494 LPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDG 553
Query: 75 YARQLRIASARQLFD----QIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
Y +A +LF+ ++ +P+ V++ ++SA + G E F M++
Sbjct: 554 YGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKK 607
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/727 (34%), Positives = 418/727 (57%), Gaps = 68/727 (9%)
Query: 12 RRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCG------CLSAAHHAFNQTQHAN- 64
+RDLV+ +L + Y N F A +S F +L +CG C + A + ++ +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEA-ISAFFDML--ECGFYPNEYCFTGVFRACSNKENISL 60
Query: 65 ---VFSFNVLLAAYARQLRIA---------------SARQLFDQIPQPDLVSYNTLISAY 106
+F F + + + + SA ++FD++P ++V++ +I+ +
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYA 164
G + A+ LF DM + D FTLSG+++A + L L +Q HCL + G D
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180
Query: 165 SVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-GLEALQLFQ 220
V SL+ Y++ +G +D+A++VF M + + +SW +++ Y Q EA++LF
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRM-PVHNVMSWTAIITGYVQSGGCDREAIELFL 239
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
EMV Q+ + +T +S+L A +L D+ G Q +A ++K + +G+ LI +Y++C
Sbjct: 240 EMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRC- 298
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
G+M + K F+ + + +LV +NT+++ Y+ K S++A F ++ G + +F +
Sbjct: 299 GNMENARKAFDVLFEKNLVSYNTIVNAYA-KSLNSEEAFELFNEIEGAGTGVNAFTFASL 357
Query: 341 ISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+S S++ G+QIH+ +K +SN + + NAL++MYS+CGN+E A ++F+ M + N
Sbjct: 358 LSGASSIGAIGKGEQIHSRILKSGFKSN-LHICNALISMYSRCGNIEAAFQVFNEMGDGN 416
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
+S SMI G+A+HG AL F MLE + P +T+++VLSAC+H G ++EG K+F
Sbjct: 417 VISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFK 476
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK------------ 507
MK G P EHY+C++DLLGR+G L +A L+ +MPF ++ L+
Sbjct: 477 SMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNM 536
Query: 508 -----AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
AA L+ +P + Y++L+N++A++G+WEEVA IR+ M++R + K+ G SWIEV
Sbjct: 537 DLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEV 596
Query: 563 KKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHS 610
+ ++H F D SHP +EI++ L++++ K+K+ GY+P KE+ L HS
Sbjct: 597 ENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHS 656
Query: 611 EKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
EK+AVA+G +STS PI V KNLR+CGDCH A K+ S + +EI +RD RFH FKDG
Sbjct: 657 EKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGT 716
Query: 671 CSCGDYW 677
CSC DYW
Sbjct: 717 CSCNDYW 723
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 182/359 (50%), Gaps = 35/359 (9%)
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
MG +D VSW++++ Y + + EA+ F +M+ + Y + A ++ E++
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 250 GLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G L+K+G F + +G LID++ K +GD+ KVF+ +P ++V W MI+ +
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSN 367
Q+ +S A+ F + GY PD + V+SAC+ + SLG+Q H L +K + +
Sbjct: 121 -QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD 179
Query: 368 RISVNNALVAMYSKC---GNLEDARRLFDRMPEHNTVSLNSMIAGYAQH-GIGMEALRLF 423
+ V +LV MY+KC G+++DAR++FDRMP HN +S ++I GY Q G EA+ LF
Sbjct: 180 -VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELF 238
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC----MID 479
M++ + P + TF SVL ACA+ + G++ ++++ M +C +I
Sbjct: 239 LEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKM-----RLASINCVGNSLIS 293
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
+ R G + +A + + L N V Y + N YA S EE
Sbjct: 294 MYSRCGNMENARKAFDV------------------LFEKNLVSYNTIVNAYAKSLNSEE 334
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 37/309 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C D+ G+ ++AL +K + + N I +YS+CG + A AF+
Sbjct: 252 TFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVL 311
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ S+N ++ AYA+ L ++E A LF
Sbjct: 312 FEKNLVSYNTIVNAYAKSL-------------------------------NSEEAFELFN 340
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + FT + L++ +S+ + K Q+H + GF + N+L++ YSR G
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A +VF EMG+ + +SW SM+ + +H AL+ F +M+ + + T ++L
Sbjct: 401 NIEAAFQVFNEMGD-GNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL 459
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + + GL+ F + ++ G + ++DL + SG + + M++ +P +
Sbjct: 460 SACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGR-SGHLEEAMELVNSMPFKA 518
Query: 297 DLVLWNTMI 305
D ++ T +
Sbjct: 519 DALVLRTFL 527
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/742 (34%), Positives = 390/742 (52%), Gaps = 105/742 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L G D+ G+ LH ++NL+ L + + +YSKCG + AH F N
Sbjct: 383 ILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERN 442
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP-----QPDLVSYNTLISAYADCGDTESALSLF 119
S+N LLA Y ++ + A +L+ + QPD ++ TL++ A+
Sbjct: 443 EVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN----------- 491
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+R D G +Q+H I V L+ YS G
Sbjct: 492 -----QRNDNQG-----------------RQIHAHLIRANITKNIIVETELVHMYSECGR 529
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L+ AK +F M E ++ SWNSM+ Y Q+ E EAL+LF++M + D ++L+S+L+
Sbjct: 530 LNYAKEIFNRMAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 588
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-------------------- 279
+ SL D G + H ++++ + + L+D+YAKC
Sbjct: 589 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVIL 648
Query: 280 ----------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
SG D +F+++ Q + LWN++++GY+ K ++ F ++
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANK-GLKKESFNHFLEMLESD 707
Query: 330 YHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
D + V +++ CS+L P+L G Q+H+L IK + + + ALV MYSKCG +
Sbjct: 708 IEYDVLTMVTIVNLCSSL-PALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITK 766
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
AR +FD M N VS N+MI+GY++HG EAL L+E M + + P +TF+++LSAC+H
Sbjct: 767 ARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH 826
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG----- 502
TG V EG + F+ M++ + E + EHY+CM+DLLGRAG+L DA+ +E MP P
Sbjct: 827 TGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWG 886
Query: 503 ------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+ AA +L+P N PYV+++NIYAA+G+W+EV IR++M+ +G
Sbjct: 887 ALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKG 946
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------- 603
V+K PG SWIE+ ++ +F A +HP +EI+N L ++ + K GY+PD
Sbjct: 947 VKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVK 1006
Query: 604 --------KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+ L+ HSE+LA++ GL+S I V KNLRICGDCH A KFIS I GR I
Sbjct: 1007 DIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRI 1066
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
RDT RFH F++G+CSCGDYW
Sbjct: 1067 IARDTNRFHHFENGKCSCGDYW 1088
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 236/459 (51%), Gaps = 36/459 (7%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +++ C+ GKS+H + N AYL ++LY++ GCL
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD---------- 123
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ AR+LF+++P+ +L ++NT+I AYA D L L+
Sbjct: 124 ------------------DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGR 165
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR +D FT +I A + ++ ++QL + G + V +L+ Y+R G+
Sbjct: 166 MRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGW 225
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D+A E+ E V+WN+++ Y + EA +F M+ + + D +T AS L
Sbjct: 226 MDDAVTSLDEI-EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALR 284
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+L GG Q H+ LI GF ++ +G+ LID+YAKC D C+KVF+E+ + + V
Sbjct: 285 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCD-DEESCLKVFDEMGERNQV 343
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN++IS +Q ++D AL F ++ GY + + ++ A + L+ G+++H
Sbjct: 344 TWNSIISAEAQFGHFND-ALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGH 402
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ + S+ I + +ALV MYSKCG +E+A ++F + E N VS N+++AGY Q G E
Sbjct: 403 LVRNLLNSD-IILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEE 461
Query: 419 ALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQK 456
AL L+ M E I P TF ++L+ CA+ +G++
Sbjct: 462 ALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 500
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 262/552 (47%), Gaps = 55/552 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C+ D+ + L + +K + + ++ + Y++ G + A + ++
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN-TLISAYADCGDTESALSLF 119
+ +V ++N ++A Y + L A +FD++ + + N T SA CG S
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRS----- 291
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
DG KQ+H I CGF V N+L+ Y++
Sbjct: 292 ---------RDGG----------------KQVHSKLIACGFKGDTFVGNALIDMYAKCDD 326
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +VF EMGE +++V+WNS++ A Q +AL LF M + + L SIL
Sbjct: 327 EESCLKVFDEMGE-RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILM 385
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L D+ G + H HL+++ + + +GS L+D+Y+KC G + + +VF + + + V
Sbjct: 386 ASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC-GMVEEAHQVFRSLLERNEV 444
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSN-LSPSLGKQIHA 357
+N +++GY Q E +++AL + + + G PD +F +++ C+N + + G+QIHA
Sbjct: 445 SYNALLAGYVQ-EGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 503
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I+ I N I V LV MYS+CG L A+ +F+RM E N S NSMI GY Q+G
Sbjct: 504 HLIRANITKN-IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ 562
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEGEHYS 475
EALRLF+ M I P + S+LS+C +G++ F + M E EG
Sbjct: 563 EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM---EEEGILQV 619
Query: 476 CMIDLLGRAGKLTDAERL-------------IEAMPFNPGSIALKAANHFLQLEPSNAVP 522
++D+ + G + A ++ + F A A N F Q+E N
Sbjct: 620 VLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTAL 679
Query: 523 YVMLANIYAASG 534
+ + YA G
Sbjct: 680 WNSILAGYANKG 691
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 240/470 (51%), Gaps = 39/470 (8%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ F N L+ YA+ S ++FD++ + + V++N++ISA A G AL LF M
Sbjct: 309 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 368
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+E + ++ F L ++ AS+ ++ ++LH + + + ++L+ YS+ G +
Sbjct: 369 QESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMV 428
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILT 239
+EA +VF + E ++EVS+N+++ Y Q + EAL+L+ +M S + D +T ++LT
Sbjct: 429 EEAHQVFRSLLE-RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ + G Q HAHLI++ +N + + L+ +Y++C G + ++F + + +
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSEC-GRLNYAKEIFNRMAERNAY 546
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHAL 358
WN+MI GY Q E + +AL FK++ G PD S ++S+C +LS S G+++H
Sbjct: 547 SWNSMIEGYQQNGE-TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 605
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLE-------------------------------D 387
++ + I + LV MY+KCG+++ D
Sbjct: 606 IVRNTMEEEGI-LQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRAND 664
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A+ LFD+M + NT NS++AGYA G+ E+ F MLE++I +T V++++ C+
Sbjct: 665 AKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSS 724
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G + S++ + ++D+ + G +T A + + M
Sbjct: 725 LPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM 774
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 214/433 (49%), Gaps = 32/433 (7%)
Query: 128 DTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE--- 182
D + S LI SN+ K +H I G++ A + +L Y+R+G LD+
Sbjct: 68 DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+++F EM E ++ +WN+M++AY + + +E L+L+ M D +T S++ A
Sbjct: 128 ARKLFEEMPE-RNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI 186
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
++ED+ G Q + ++K+G + N +G L+D YA+ G M D + +EI +V WN
Sbjct: 187 AMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARF-GWMDDAVTSLDEIEGTSVVTWN 245
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIK 361
+I+GY + + ++A G F ++ ++G PD+ +F + C L S GKQ+H+ I
Sbjct: 246 AVIAGYVKILSW-EEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA 304
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ + V NAL+ MY+KC + E ++FD M E N V+ NS+I+ AQ G +AL
Sbjct: 305 CGFKGDTF-VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDL 480
LF M E+ S+L A A + +G++ +++++ + S ++D+
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL--LNSDIILGSALVDM 421
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
+ G + +A ++ F L N V Y L Y GK EE
Sbjct: 422 YSKCGMVEEAHQV------------------FRSLLERNEVSYNALLAGYVQEGKAEEAL 463
Query: 541 TIRRLMR-DRGVQ 552
+ M+ + G+Q
Sbjct: 464 ELYHDMQSEDGIQ 476
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 227/486 (46%), Gaps = 47/486 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C +R+ G+ +HA ++ + + + + +YS+CG L+ A FN+
Sbjct: 481 TFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM 540
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N +S+N ++ Y + A +LF Q+ +PD S ++++S+ D++
Sbjct: 541 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 600
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY--CGFDHYAS--------- 165
L + + +G I Q+ + +Y CG YA
Sbjct: 601 ELHNFIVRNTMEEEG----------------ILQVVLVDMYAKCGSMDYAWKVYDQTIKK 644
Query: 166 ---VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
+NN +++ + +G ++AK +F +M E ++ WNS++ Y E+ F EM
Sbjct: 645 DVILNNVMVSAFVNSGRANDAKNLFDQM-EQRNTALWNSILAGYANKGLKKESFNHFLEM 703
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSG 281
+ + D+ T+ +I+ +SL L G Q H+ +IK GF S + + L+D+Y+KC G
Sbjct: 704 LESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKC-G 762
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
+ VF+ + ++V WN MISGYS K S +AL ++++ + G +P++ +F+ ++
Sbjct: 763 AITKARTVFDNMNGKNIVSWNAMISGYS-KHGCSKEALILYEEMPKKGMYPNEVTFLAIL 821
Query: 342 SACSNLSPSLGKQIHALT-----IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
SACS+ + + + + T IE ++ + +V + + G LEDA+ ++MP
Sbjct: 822 SACSH-TGLVEEGLRIFTSMQEDYNIEAKAEHYT---CMVDLLGRAGRLEDAKEFVEKMP 877
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
VS + G + M+ RL L P +V + + A G+ E +
Sbjct: 878 IEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVED 937
Query: 457 YFSMMK 462
MMK
Sbjct: 938 IRQMMK 943
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/711 (36%), Positives = 393/711 (55%), Gaps = 71/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF +LK C R DL TG+++HA L + L P A
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSP-----------------------EALAA 263
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
T AN+ YA+ R AR++FD++P D V++N L++ YA G E+A+ +
Sbjct: 264 TALANM---------YAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMV 314
Query: 120 KDMREKRFD-TDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M+E+ + D TL ++ A ++ L +++H A+ GFD +V+ ++L Y +
Sbjct: 315 VRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCK 374
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D A++VF M + ++ VSWN+M+ Y ++ + EAL LF+ MV + + ++ +
Sbjct: 375 CGAVDSARKVFDGMQD-RNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLA 433
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQ 295
L A L L G + H L++ G N ++ + LI +Y KC D+ +VF+E+
Sbjct: 434 ALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDL--AAQVFDELGY 491
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQ 354
V WN MI G +Q S+ A+ F ++ PD + V +I A +++S P +
Sbjct: 492 KTRVSWNAMILGCTQNGS-SEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARW 550
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH +I++ + + + V AL+ MY+KCG + AR LF+ + + ++ N+MI GY HG
Sbjct: 551 IHGYSIRLHLDQD-VYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHG 609
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G A+ LFE M + P TF+SVLSAC+H G V EGQ+YFS MK+ +G EP EHY
Sbjct: 610 SGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHY 669
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP 517
M+DLLGRAGKL +A I+ MP PG +A ++A +LEP
Sbjct: 670 GTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEP 729
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
V +V+LANIYA + W++VA +R M +G+QK PG+S +++K ++H F + +H
Sbjct: 730 EEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQ 789
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGE 626
K+I+ L ++ ++K GYVPD K + L HSEKLA+A+GL+ T+ G
Sbjct: 790 QAKDIYARLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGT 849
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+C DCHNA K IS + GREI +RD RFH FKDG+CSCGDYW
Sbjct: 850 TIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/709 (37%), Positives = 383/709 (54%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK V G S+HA K A++ I YS CG
Sbjct: 147 VFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCG------------ 194
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
YA ARQ+FD I D+VS+ +++ Y + E +L LF
Sbjct: 195 --------------YAE-----CARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFS 235
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR F + FT + ++ A + K +H A + V L+ Y ++G
Sbjct: 236 RMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSG 295
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A +VF EM + D + W+ M+ Y Q + EA+++F M + + +TLAS+L
Sbjct: 296 DVDDALQVFEEMPK-DDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLL 354
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL DL G Q H H++K G N + + L+D+YAKC G M + +++F E P
Sbjct: 355 QACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKC-GRMENSLQLFSESPNCTD 413
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WNT+I GY Q ++AL FK + + ++ V+ AC+ ++ G QIH+
Sbjct: 414 VSWNTVIVGYVQAGN-GEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHS 472
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L++K N + V NAL+ MY+KCGN++DAR +FD + EH+ VS N+MI+GY+ HG+
Sbjct: 473 LSVKTIYDKNTV-VGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYG 531
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+ FE MLET P +TFV +LSAC++ G + GQ YF M + + EP EHY+CM
Sbjct: 532 EALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCM 591
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+ LLGR+G L A +L+ +PF P + +A A L++EP +
Sbjct: 592 VWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDE 651
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+NIYA + +W VA+IR M+ +G++K+PG SWIE + ++H F D SHP K
Sbjct: 652 ATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTK 711
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I+ LE ++ K + GYVP DKE+RL HSE+LA+A+GL+ T P+
Sbjct: 712 LINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPL 771
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KNLRIC DCH AIK IS I R+I +RD RFH F +G CSCGDYW
Sbjct: 772 RIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 257/499 (51%), Gaps = 40/499 (8%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L++C+ D TGK LH +K K CL
Sbjct: 47 YGSLLQSCIRNGDCATGKYLHCEIIK------------------KGNCL----------- 77
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++F+ N+LL Y + + A +LFD++P + VS+ TLI Y+ C A+ LF
Sbjct: 78 --DLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSR 135
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
++ + + + F S ++ S+ L +H GFD A V +L+ CYS G+
Sbjct: 136 LQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGY 195
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A++VF + E KD VSW MV Y ++ E+L+LF M + + +T AS+L
Sbjct: 196 AECARQVFDAI-EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLK 254
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A LE G H K+ + + +G LIDLY K SGD+ D ++VFEE+P+ D++
Sbjct: 255 ACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK-SGDVDDALQVFEEMPKDDVI 313
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W+ MI+ Y+Q E+ S++A+ F ++ R P+ + ++ AC++L LG QIH
Sbjct: 314 PWSFMIARYAQSEQ-SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCH 372
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K+ + N + V+NAL+ MY+KCG +E++ +LF P VS N++I GY Q G G +
Sbjct: 373 VVKVGLDMN-VFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK 431
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF+ MLE + T +T+ SVL ACA + G + S+ ++ + +I
Sbjct: 432 ALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTI-YDKNTVVGNALI 490
Query: 479 DLLGRAGKLTDAERLIEAM 497
D+ + G + DA RL+ M
Sbjct: 491 DMYAKCGNIKDA-RLVFDM 508
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 38/331 (11%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ Y S+L + D G H +IK G + + L++ Y K + D K
Sbjct: 42 FNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVK-YDSLPDAAK 100
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNL 347
+F+E+P + V + T+I GYSQ +S +A+G F +L G+ + F V+ S
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFS-EAIGLFSRLQGEGHELNPFVFSTVLKLLVSAE 159
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG +HA K+ S+ V AL+ YS CG E AR++FD + + VS M+
Sbjct: 160 WAKLGFSVHACVYKLGFDSDAF-VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMV 218
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKY-FSMM 461
A Y ++ E+L+LF M P N TF SVL AC + GK G + S +
Sbjct: 219 ACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYL 278
Query: 462 KDMF-GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
+++F G E +IDL ++G + DA ++ E MP +
Sbjct: 279 EELFVGVE--------LIDLYIKSGDVDDALQVFEEMP------------------KDDV 312
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
+P+ + YA S + EE + MR RG+
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMR-RGL 342
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/706 (37%), Positives = 388/706 (54%), Gaps = 85/706 (12%)
Query: 3 RQVLKTCVGRRDLVTGKSL-HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
R L+ CV R+L + L + +++V ++A LS Y++ G + A F++
Sbjct: 34 RHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSG-----YAQNGYVKEAKEIFDEMP 88
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N S+N +LAAY + RI AR+LF+ +L+S+N ++ Y A +F
Sbjct: 89 CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDR 148
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
M E+ D + + +I+ + N L++ D + ++++ Y +NG LD
Sbjct: 149 MPER----DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWT--AMVSGYVQNGMLD 202
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+RVF M E K+ VSWN+++ Y Q + +A +LF+ M
Sbjct: 203 EARRVFDGMPE-KNSVSWNAIIAGYVQCKRMDQARELFEAMPC----------------- 244
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
QN + +I YA+ +GD+ F+ +PQ D + W
Sbjct: 245 ----------------------QNVSSWNTMITGYAQ-NGDIAQARNFFDRMPQRDSISW 281
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
+I+GY+Q Y ++AL F ++ R G + +F +S C+ ++ LGKQ+H +
Sbjct: 282 AAIIAGYAQSG-YGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 340
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K + S V NAL+ MY KCGN++DA +F+ + E VS N+MIAGYA+HG G EAL
Sbjct: 341 KAGLESG-CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 399
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LFE M +T I P ++T V VLSAC+HTG V +G +YF M +G +HY+CMIDL
Sbjct: 400 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDL 459
Query: 481 LGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPY 523
LGRAG+L DA+ L++ MPF P + + KAA ++EP N+ Y
Sbjct: 460 LGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY 519
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YAASG+W +V +R MRDRGV+K PG+SW+EV+ ++H F D HP I+
Sbjct: 520 VLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIY 579
Query: 584 NYLEEMSRKMKQAGYVPD--------KEKRLVH----HSEKLAVAFGLLSTSYGEPILVM 631
+LEE+ KMK+ GYV +E+ VH HSEKLAVAFG+L+ G PI V+
Sbjct: 580 TFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVI 639
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCHNA+K IS I GR I +RD++RFH F G+CSCGDYW
Sbjct: 640 KNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 103/260 (39%), Gaps = 41/260 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L TC L GK +H +K + Y+ N +++Y KCG + A+ F
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ V S+N ++A YAR A LF+ + + PD V+ ++SA + G +
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + G+ S + C+I L R
Sbjct: 435 EYFYSMTQD---------YGITANSKHYTCMIDLL-----------------------GR 462
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G LD+A+ + M D +W +++ A +G G +A ++ EM G MY
Sbjct: 463 AGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSG--MYV 520
Query: 234 LASILTAFTSLEDLVGGLQF 253
L S L A + VG ++
Sbjct: 521 LLSNLYAASGRWGDVGRMRL 540
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/710 (35%), Positives = 394/710 (55%), Gaps = 68/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +++T ++L GK LHA+ ++ + +LSNHF+ LYSKCG
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCG------------ 124
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +LFD++ Q ++VS+ ++I+ +A + ALS F
Sbjct: 125 -------------------ELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFC 165
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + F LS ++ A S + Q+HCL + CGF V ++L YS+ G
Sbjct: 166 QMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCG 225
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A + F EM KD V W SM+ + ++ + +AL + +MV+ + +D + L S L
Sbjct: 226 ELSDACKAFEEM-PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTL 284
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIPQPD 297
+A ++L+ G HA ++K GF + IG+ L D+Y+K SGDM VF+
Sbjct: 285 SACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSK-SGDMVSASNVFQIHSDCIS 343
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+V +I GY + ++ ++AL F L R G P++ +F +I AC+N + G Q+H
Sbjct: 344 IVSLTAIIDGYVEMDQI-EKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLH 402
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+K + + V++ LV MY KCG + + +LFD + + ++ N+++ ++QHG+G
Sbjct: 403 GQVVKFNFKRDPF-VSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLG 461
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
A+ F M+ + P +TFV++L C+H G V +G YFS M+ ++G P+ EHYSC
Sbjct: 462 RNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSC 521
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSN 519
+IDLLGRAGKL +AE I MPF P A AA+ ++LEP N
Sbjct: 522 VIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPEN 581
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ +V+L+NIYA +WE+V ++R++++D + K PG+SW++++ + HVF ED SHP
Sbjct: 582 SGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQK 641
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
KEI+ L+ + ++K+ GYVP KEK L +HSE++AVAF LL+ G P
Sbjct: 642 KEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMP 701
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I+V KNLR+C DCH+A+KFIS + R I VRD RFH F +G CSCGDYW
Sbjct: 702 IIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 5/267 (1%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D T+A ++ + ++L G Q HA LI+ G N+ + + ++LY+KC G++ +K+
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKC-GELDYTIKL 132
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
F+++ Q ++V W ++I+G++ + +AL F ++ G + V+ AC++L
Sbjct: 133 FDKMSQRNMVSWTSIITGFAHNSRFQ-EALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G Q+H L +K + V + L MYSKCG L DA + F+ MP + V SMI
Sbjct: 192 IQFGTQVHCLVVKCGFGC-ELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMID 250
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G+ ++G +AL + M+ ++ S LSAC+ + G+ + + + GFE
Sbjct: 251 GFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKL-GFE 309
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIE 495
E + + D+ ++G + A + +
Sbjct: 310 YETFIGNALTDMYSKSGDMVSASNVFQ 336
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/641 (38%), Positives = 367/641 (57%), Gaps = 37/641 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I AR +FD + D++S+N +I A G A ++F M+++ F
Sbjct: 273 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV 332
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T L+ S+ +K++H A+ G V ++ + Y R G +D+A+ +
Sbjct: 333 PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLI 392
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F ++ +++ +WN+M+ Q + G EAL LF +M D T +IL+A E
Sbjct: 393 FDKLA-VRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEA 451
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L + H++ I +G + +G+ L+ +YAKC M +VF+++ + ++ W MIS
Sbjct: 452 LEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMY-AKQVFDDMVERNVTTWTVMIS 509
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
G +Q +A F ++ R G PD ++V ++SAC++ K++H+ + +
Sbjct: 510 GLAQ-HGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLV 568
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V NALV MY+KCG+++DARR+FD M E + S MI G AQHG G++AL LF
Sbjct: 569 SD-LRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVK 627
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M P +FV+VLSAC+H G V EG++ F + +G EP EHY+CM+DLLGRAG
Sbjct: 628 MKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAG 687
Query: 486 KLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLAN 528
+L +A+ I MP PG +A AA L+L+P +A YV+L+N
Sbjct: 688 QLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSN 747
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYAA+G WE+ +R +M+ RG++K+PG SWIEV Q+H FV D SHP KEI+ L++
Sbjct: 748 IYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKD 807
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ +++K GYVPD KE+ L HSEKLA+ +GL+ T Y PI V KNLR+
Sbjct: 808 LIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRV 867
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH A KFIS + GREI RD RFH FKDG CSCGDYW
Sbjct: 868 CSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 221/448 (49%), Gaps = 11/448 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA N ++ N L+ YA+ I AR +FD + + D+ S+ +I A G +
Sbjct: 156 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQE 215
Query: 115 ALSLFKDMRE----KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
A SLF M T L+ S+ L +K++H A GF V N+L
Sbjct: 216 AFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNAL 275
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y++ G +D+A+ VF M + +D +SWN+M+ Q+ G EA +F +M D
Sbjct: 276 IHMYAKCGSIDDARLVFDGMCD-RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPD 334
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T S+L S + H H ++ G + +GS + +Y +C G + D +F
Sbjct: 335 STTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC-GSIDDAQLIF 393
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSP 349
+++ ++ WN MI G +Q ++ +AL F ++ R G+ PD +FV ++SA +
Sbjct: 394 DKLAVRNVTTWNAMIGGVAQ-QKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEAL 452
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
K++H+ I + R V NALV MY+KCGN A+++FD M E N + MI+G
Sbjct: 453 EWVKEVHSYAIDAGLVDLR--VGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISG 510
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
AQHG G EA LF ML I P T+VS+LSACA TG + ++ S + G
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNA-GLVS 569
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + ++ + + G + DA R+ + M
Sbjct: 570 DLRVGNALVHMYAKCGSVDDARRVFDDM 597
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 181/353 (51%), Gaps = 9/353 (2%)
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCG 159
+I YA+ G E A+ ++ MR + + T ++ A S +L K++H I G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
F V +L+ Y + G +D+A+ +F +M E ++ +SW M+ + G EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE-RNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M + YT SIL A S L + H+H + +G + +G+ L+ +YAK
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK- 178
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
SG + D VF+ + + D+ W MI G +Q +A F ++ R G P+ +++
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGR-GQEAFSLFLQMERGGCLPNLTTYLS 237
Query: 340 VISACSNLSPS---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+++A + S K++H K S+ + V NAL+ MY+KCG+++DAR +FD M
Sbjct: 238 ILNASAITSTGALEWVKEVHKHAGKAGFISD-LRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+ + +S N+MI G AQ+G G EA +F M + P + T++S+L+ TG
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG 349
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 153/366 (41%), Gaps = 46/366 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L VG L K +H+ Y + + N + +Y+KCG
Sbjct: 438 TFVNILSANVGEEALEWVKEVHS-YAIDAGLVDLRVGNALVHMYAKCG------------ 484
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N + YA+Q +FD + + ++ ++ +IS A G A SLF
Sbjct: 485 --------NTM---YAKQ--------VFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFL 525
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + D T +++ AS+ L +K++H A+ G V N+L+ Y++ G
Sbjct: 526 QMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCG 585
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+RVF +M E +D SW M+ QH GL+AL LF +M + Y+ ++L
Sbjct: 586 SVDDARRVFDDMLE-RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVL 644
Query: 239 TAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S LV G QF + G + ++DL + +G + + +P +
Sbjct: 645 SA-CSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGR-AGQLEEAKHFILNMPIE 702
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
P W ++ Y + + F R+ P S ++ SN+ + G
Sbjct: 703 PGDAPWGALLGACVT---YGNLEMAEFAAKERLKLKPKSASTYVLL---SNIYAATGNWE 756
Query: 356 HALTIK 361
L ++
Sbjct: 757 QKLLVR 762
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/707 (37%), Positives = 388/707 (54%), Gaps = 68/707 (9%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
V++T + L GK LHAL + +L+NH + +YSKCG L HA
Sbjct: 10 HVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELD---HAL------ 60
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+LFD +PQ +LVS+ +IS + A+ F MR
Sbjct: 61 ----------------------KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMR 98
Query: 124 EKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F S I AS ++ + KQ+HCLA+ G V ++L YS+ G +
Sbjct: 99 ICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMF 158
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A +VF EM KDEVSW +M+ Y + E EAL F++M+ ++ +D + L S L A
Sbjct: 159 DACKVFEEM-PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIPQPDLVL 300
+L+ G H+ ++K GF + +G+ L D+Y+K +GDM VF + ++V
Sbjct: 218 GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK-AGDMESASNVFGIDSECRNVVS 276
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+ +I GY + E+ ++ L F +L R G P++ +F +I AC+N + G Q+HA
Sbjct: 277 YTCLIDGYVETEQI-EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+KI + V++ LV MY KCG LE A + FD + + ++ NS+++ + QHG+G +A
Sbjct: 336 MKINFDEDPF-VSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
++ FE M++ + P ITF+S+L+ C+H G V EG YF M +G P EHYSC+ID
Sbjct: 395 IKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 454
Query: 480 LLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVP 522
LLGRAG+L +A+ I MPF P + + AA ++LEP N+
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 514
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
V+L+NIYA +WE+V ++R MRD V+K PG+SW++V + HVF AED SH I
Sbjct: 515 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAI 574
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+ + ++K AGYVP KEK L HSE++AVAF L+S G+PI+V
Sbjct: 575 YEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIV 634
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH+AIKFIS + GR+I VRD RFH F DG CSCGDYW
Sbjct: 635 KKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 22/324 (6%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D LA ++ + + L G Q HA LI +G+ + + + L+++Y+KC G++ +K+
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC-GELDHALKL 62
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-S 348
F+ +PQ +LV W MISG SQ ++S +A+ F + G P +F I AC++L S
Sbjct: 63 FDTMPQRNLVSWTAMISGLSQNSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+GKQ+H L +K I S + V + L MYSKCG + DA ++F+ MP + VS +MI
Sbjct: 122 IEMGKQMHCLALKFGIGS-ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GY++ G EAL F+ M++ + S L AC G+ S + + GFE
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFE 239
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLAN 528
+ + + D+ +AG + A + + E N V Y L +
Sbjct: 240 SDIFVGNALTDMYSKAGDMESASNVFG-----------------IDSECRNVVSYTCLID 282
Query: 529 IYAASGKWEEVATIRRLMRDRGVQ 552
Y + + E+ ++ +R +G++
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIE 306
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 185/422 (43%), Gaps = 45/422 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F ++ C + GK +H L LK + ++ ++ +YSKCG +
Sbjct: 108 AFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAM---------- 157
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++F+++P D VS+ +I Y+ G+ E AL FK
Sbjct: 158 ---------------------FDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 196
Query: 121 DMREKRFDTDGFTL-SGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ D L S L + C + +H + GF+ V N+L YS+ G
Sbjct: 197 KMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A VF E ++ VS+ ++ Y + + + L +F E+ + + +T +S++
Sbjct: 257 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLI 316
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G Q HA ++K F ++ + S L+D+Y KC G + ++ F+EI P
Sbjct: 317 KACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC-GLLEHAIQAFDEIGDPTE 375
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
+ WN+++S + Q D A+ F+++ G P+ +F+ +++ CS+ G L
Sbjct: 376 IAWNSLVSVFGQHGLGKD-AIKFFERMVDRGVKPNAITFISLLTGCSH----AGLVEEGL 430
Query: 359 TIKIEIRSNRISVN-----NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQ 412
+ V + ++ + + G L++A+ +RMP E N S +
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 490
Query: 413 HG 414
HG
Sbjct: 491 HG 492
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/672 (38%), Positives = 366/672 (54%), Gaps = 111/672 (16%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA-RQLRIASARQLFDQIPQPD 95
SN I + + G L++A F ++N +LA Y+ R+ +I ARQLFD+IP+PD
Sbjct: 8 SNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPD 67
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA 155
+ SYN +++ Y D ESA F M K DT +
Sbjct: 68 IFSYNIMLACYLHNADVESARLFFDQMPVK--DTASW----------------------- 102
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
N++++ +S+NG +D+A+ +F M +++ VSWN+M+ Y
Sbjct: 103 ------------NTMISGFSQNGMMDQARELFLVM-PVRNSVSWNAMISGY--------- 140
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
E L L ++ +A + + + G ++F G I+L
Sbjct: 141 ----VESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKF-----------------GKIEL 179
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
K FEE+P +LV WN MI+GY + + ++ L FK++ G+ P+
Sbjct: 180 ----------AEKYFEEMPMKNLVTWNAMIAGYIENCQ-AENGLKLFKRMVESGFRPNPS 228
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
S V+ CSNLS LGKQ+H L K + N I+ +L++MY KCG+LEDA +LF
Sbjct: 229 SLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN-ITAGTSLLSMYCKCGDLEDAWKLFLV 287
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
MP+ + V+ N+MI+GYAQHG G +AL LF+ M + + P ITFV+VLSAC H G V G
Sbjct: 288 MPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLG 347
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----------- 503
+YF+ M +G E + +HY+C++DLLGR GKL +A LI+ MPF P S
Sbjct: 348 IEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACR 407
Query: 504 ------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
+A AA + L L+P +A YV LAN+YAA +W+ VA +RR M+D V K PG+
Sbjct: 408 IHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGY 467
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKR 605
SWIEVK +H F + D HP + IH L E+ RKM+ AGYVPD K++
Sbjct: 468 SWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQI 527
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
L+ HSEKLA+A+GL+ G PI V KNLR+CGDCH+A K+ISAI GR I VRDT RFH
Sbjct: 528 LLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHH 587
Query: 666 FKDGRCSCGDYW 677
F+ G CSCGDYW
Sbjct: 588 FRQGECSCGDYW 599
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 198/382 (51%), Gaps = 20/382 (5%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
+ ++ +K V +++ L+ + ++ G + A F++ ++FS+N++LA Y
Sbjct: 26 RVFESMTVKTTVTWNSMLAGY----SNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHN 81
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI 138
+ SAR FDQ+P D S+NT+IS ++ G + A LF M + + +SG +
Sbjct: 82 ADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYV 141
Query: 139 TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S +L L KQL +A + +++T + + G ++ A++ F EM +K+ V+
Sbjct: 142 --ESGDLDLAKQLFEVAPVRSVVAWT----AMITGFMKFGKIELAEKYFEEM-PMKNLVT 194
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WN+M+ Y ++ + L+LF+ MV + +L+S+L ++L L G Q H +
Sbjct: 195 WNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLIC 254
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
KS N G+ L+ +Y KC GD+ D K+F +PQ D+V WN MISGY+Q ++A
Sbjct: 255 KSPVSWNITAGTSLLSMYCKC-GDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGA-GEKA 312
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIK---IEIRSNRISVNNA 374
L F K+ G PD +FV V+SAC++ LG + ++ +E + + +
Sbjct: 313 LYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYT---C 369
Query: 375 LVAMYSKCGNLEDARRLFDRMP 396
+V + + G L +A L +MP
Sbjct: 370 VVDLLGRGGKLVEAVDLIKKMP 391
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C L GK +H L K+ V ++ + +Y KCG L A F
Sbjct: 229 SLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVM 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V ++N +++ YA+ A LFD++ +PD +++ ++SA G + +
Sbjct: 289 PQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGI 348
Query: 117 SLFKDM 122
F M
Sbjct: 349 EYFNSM 354
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA-QHGIGMEALRLF 423
+S+ + +N ++ + + G+L A R+F+ M TV+ NSM+AGY+ + G A +LF
Sbjct: 1 KSSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLF 60
Query: 424 EWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
+ IP +I +++ AC H V + +F M + ++ MI
Sbjct: 61 D-----RIPEPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFS 110
Query: 483 RAGKLTDAERLIEAMP 498
+ G + A L MP
Sbjct: 111 QNGMMDQARELFLVMP 126
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/720 (36%), Positives = 401/720 (55%), Gaps = 70/720 (9%)
Query: 15 LVTGKSLHALYLKNLVP-FSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
+ TG+ AL + +P +S+ N I Y + G A F++ ++ S+NV++
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
Y R + AR+LF+ +P+ D+ S+NT++S YA G + A S+F M EK +
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 134 LSG-----------LITASSNNLCLIKQLHCL--------AIYCGFDHYASVN------- 167
LS ++ S N L+ +CL I + S+N
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALV-SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW 253
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+++T Y+++G +DEA+++F E ++D +W +MV Y Q+R EA +LF +M
Sbjct: 254 NTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-- 310
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ + ++L + E + + L +N + +I YA+C G + +
Sbjct: 311 --NEVSWNAMLAGYVQGERM----EMAKELFDVMPCRNVSTWNTMITGYAQC-GKISEAK 363
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F+++P+ D V W MI+GYSQ +S +AL F ++ R G + SF +S C+++
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSG-HSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LGKQ+H +K + V NAL+ MY KCG++E+A LF M + VS N+M
Sbjct: 423 VALELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IAGY++HG G ALR FE M + P + T V+VLSAC+HTG V +G++YF M +G
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG 541
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
P +HY+CM+DLLGRAG L DA L++ MPF P + +A AA
Sbjct: 542 VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ +EP N+ YV+L+N+YA+SG+W +V +R MRD+GV+K PG+SWIE++ + H F
Sbjct: 602 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
D HP EI +LEE+ +MK+AGYV +KE+ + +HSE+LAVA+
Sbjct: 662 SVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAY 721
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G++ S G PI V+KNLR+C DCHNAIK+++ I GR I +RD RFH FKDG CSCGDYW
Sbjct: 722 GIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 197/399 (49%), Gaps = 35/399 (8%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+++ +NV +++Y R R A ++F ++P+ VSYN +IS Y G+ E A LF +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
E+ D + + +I N L K I D N++L+ Y++NG +D+
Sbjct: 122 PER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERD--VCSWNTMLSGYAQNGCVDD 175
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF M E K++VSWN+++ AY Q+ + EA LF+ + L + +L F
Sbjct: 176 ARSVFDRMPE-KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFV 230
Query: 243 SLEDLVGGLQFHAHL-IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ +V QF + ++ N+ +I YA+ SG + + ++F+E P D+ W
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNT-----IITGYAQ-SGKIDEARQLFDESPVQDVFTW 284
Query: 302 NTMISGYSQKEEYSDQALGCFKKL---NRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
M+SGY Q ++A F K+ N V ++ +V G+++
Sbjct: 285 TAMVSGYIQN-RMVEEARELFDKMPERNEVSWNAMLAGYV------------QGERMEMA 331
Query: 359 TIKIEIRSNR-ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ R +S N ++ Y++CG + +A+ LFD+MP+ + VS +MIAGY+Q G
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
EALRLF M +F S LS CA + G++
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 38/214 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L TC L GK LH +K ++ N +L+Y KCG + A+ F +
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N ++A Y+R G E AL F+
Sbjct: 471 AGKDIVSWNTMIAGYSRH-------------------------------GFGEVALRFFE 499
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS-----LLTCYS 175
M+ + D T+ +++A S+ + K Y Y + NS ++
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF--YTMTQDYGVMPNSQHYACMVDLLG 557
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
R G L++A + M D W +++ A H
Sbjct: 558 RAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N ++ Y + G +A R+F RMP ++VS N MI+GY ++G A +LF+ M E ++
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE--HYSCMIDLLGRAGKLTDA 490
N+ ++ + + ++ F +M PE + ++ M+ + G + DA
Sbjct: 128 SWNV----MIKGYVRNRNLGKARELFEIM-------PERDVCSWNTMLSGYAQNGCVDDA 176
Query: 491 ERLIEAMP 498
+ + MP
Sbjct: 177 RSVFDRMP 184
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 264/684 (38%), Positives = 383/684 (55%), Gaps = 84/684 (12%)
Query: 24 LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIAS 83
+ +K+ V ++ +S+H + G +S A H F+ + S+N +LAAY R RI
Sbjct: 195 MPVKDSVSYNVMISSH-----ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQE 249
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR+LFD + D +S+N L++ Y E A +F M ++ + +SG A
Sbjct: 250 ARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGY--ARRG 307
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
++ ++L +A + ++ ++ Y++NG L+EAKRVF M + K+ VSWN+M+
Sbjct: 308 DMAEARRLFDVAPIRDVFTWTAI----VSGYAQNGMLEEAKRVFDAMPD-KNAVSWNAMM 362
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
AY Q R EA +LF M +AS T T G+
Sbjct: 363 AAYVQRRMMEEAKELFDAMPC-------RNVASWNTMLT------------------GYA 397
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
Q +G++D + +F +PQ D V W M++ YSQ +S++ L FK
Sbjct: 398 Q-----AGMLD----------EARAIFGMMPQKDAVSWAAMLAAYSQIG-FSEETLQLFK 441
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
++ R G + +F CV+S C++++ G Q+H+ IK V NAL+AMY KC
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG-CFVGNALLAMYFKC 500
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G++E+A F+ M E + VS N+MIAGYA+HG G EAL +F+ M +T+ P +IT V VL
Sbjct: 501 GSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVL 560
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
+AC+H+G V +G YF M FG + EHY+CMIDLLGRAG+L +A L++ MPF P
Sbjct: 561 AACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPD 620
Query: 503 S-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
S + AA +LEP NA YV+L+NIYA+SGKW +V +R +
Sbjct: 621 STMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHI 680
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP----- 600
M +RGV+K PGFSWIEV+ ++H F D HP ++I+ +LE++ +MK+AGYV
Sbjct: 681 MHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMV 740
Query: 601 -------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
+KE L +HSEKLAVA+G+L G PI V+KNLR+C DCH A K ISAI GR
Sbjct: 741 LHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGR 800
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
I +RD+ RFH F+DG CSCGDYW
Sbjct: 801 LIILRDSNRFHHFRDGSCSCGDYW 824
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 176/403 (43%), Gaps = 103/403 (25%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V N + A+ R R+ A +LF +P+ +YNT+++ YA G ALS F+ +
Sbjct: 107 VIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR 166
Query: 125 KRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYA---SVN-NSLLTCYSRNG 178
D F+ + L+ A S++L ++ L FD SV+ N +++ ++ +G
Sbjct: 167 ----PDSFSYNTLLHALGVSSSLADVRAL--------FDEMPVKDSVSYNVMISSHANHG 214
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A R ++++ KD VSWN M+ AY ++ EA +LF
Sbjct: 215 LVSLA-RHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWD------------ 261
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ ++A + +G+ Q S I + K+F ++PQ D+
Sbjct: 262 -----------AISWNA--LMAGYVQRSQI---------------EEAQKMFNKMPQRDV 293
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V WNTM+SGY+++ + ++ ++L V D ++ ++S
Sbjct: 294 VSWNTMVSGYARRGDMAEA-----RRLFDVAPIRDVFTWTAIVSG--------------- 333
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
Y++ G LE+A+R+FD MP+ N VS N+M+A Y Q + E
Sbjct: 334 --------------------YAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEE 373
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
A LF+ M N+ N ++L+ A G + E + F MM
Sbjct: 374 AKELFDAMPCRNVASWN----TMLTGYAQAGMLDEARAIFGMM 412
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL TC L G LH+ +K ++ N + +Y KCG + AH AF +
Sbjct: 454 AFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEM 513
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N ++A YAR A ++FD + +PD ++ +++A + G E +
Sbjct: 514 EERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGI 573
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F M + F G+ T + C+I L R
Sbjct: 574 SYFYSM-HRDF--------GVATKPEHYTCMIDLL-----------------------GR 601
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLGLDMYT 233
G LDEA + +M D W +++ A HR G A + E+ G MY
Sbjct: 602 AGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAG--MYV 659
Query: 234 LASILTA 240
L S + A
Sbjct: 660 LLSNIYA 666
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 271/782 (34%), Positives = 416/782 (53%), Gaps = 128/782 (16%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+ +++HA L + + ++ N I +Y K ++ A F++ ++ + LL+AY
Sbjct: 22 IIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAY 81
Query: 76 ARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
+ + A+QLF+ P D VSYN +I+AY+ D +AL+LF M+ F D FT
Sbjct: 82 SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141
Query: 134 LSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCY------------ 174
S +++A L LI + LHC I G SV N+LL+CY
Sbjct: 142 FSSVLSA----LSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSS 197
Query: 175 -----SRNGFLDEAKRVFYE-------MGEIKDE-----------------VSWNSMVVA 205
+R F + K YE G ++++ V+WN+M+
Sbjct: 198 QLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISG 257
Query: 206 YGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG----GLQFHAHLIK 259
Y R GL EA F+ M S+ + D YT S+++A S + +G G Q H ++++
Sbjct: 258 YV--RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILR 315
Query: 260 SGFHQNSH----IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY--SQKEE 313
+ + H + + LI Y K M + +VF+++P D++ WN ++SGY +Q+ E
Sbjct: 316 TVVEPSHHFVLSVNNALITFYTKYD-RMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIE 374
Query: 314 ----------------------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+ ++ L F ++ G P D +F I+ACS
Sbjct: 375 EANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACS 434
Query: 346 NL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L S G+QIH+ I++ S +S NAL+ MYS+CG +E A +F MP ++VS N
Sbjct: 435 VLGSLDNGQQIHSQVIRLGHDSG-LSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWN 493
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MIA AQHG G++A+ LFE M++ +I P ITF+++L+AC H G + EG+ YF M
Sbjct: 494 AMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTR 553
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALK 507
+G P +HY+ +IDLL RAG A+ +I++MPF G+ + ++
Sbjct: 554 YGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQ 613
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA+ L+L P Y++L+N+YAA G+W+EVA +R LMR+RGV+K+PG SW+EV+ +H
Sbjct: 614 AADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVH 673
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
VF+ +D HP ++ ++ YL+++ +MK+ GYVPD KE L HSEKLAV
Sbjct: 674 VFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAV 733
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
+G++ G I V KNLRICGDCHNA K+IS + REI VRD RFH FK+G CSCG+
Sbjct: 734 VYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGN 793
Query: 676 YW 677
YW
Sbjct: 794 YW 795
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 375/642 (58%), Gaps = 40/642 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ ++ + AR +FD + D VS+N++I+ + G A F +M+
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAK 301
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
T + +I AS L L++ LHC + G +V +L+ ++ +D+A +
Sbjct: 302 PTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSL 361
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M ++ VSW +M+ Y Q+ + +A+ LF M + + +T ++ILT ++
Sbjct: 362 FSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQH 417
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
V + HA +IK+ + ++S +G+ L+D + K G++ D +KVFE I D++ W+ M++
Sbjct: 418 AVFISEIHAEVIKTNYEKSSSVGTALLDAFVKI-GNISDAVKVFELIETKDVIAWSAMLA 476
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEI 364
GY+Q E +++A F +L R G P++ +F +I+AC+ + S+ GKQ HA IK+ +
Sbjct: 477 GYAQAGE-TEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRL 535
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+N + V+++LV +Y+K GN+E A +F R E + VS NSMI+GYAQHG +AL +FE
Sbjct: 536 -NNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFE 594
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + N+ ITF+ V+SACAH G V +GQ YF++M + P EHYSCMIDL RA
Sbjct: 595 EMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRA 654
Query: 485 GKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLA 527
G L A +I MPF P + + AA + LEP ++ YV+L+
Sbjct: 655 GMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLS 714
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+G W E +R+LM R V+K+PG+SWIEVK + + F+A D SHP+ I++ L
Sbjct: 715 NIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLS 774
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
E++ +++ GY PD KE L HHSE+LA+AFGL++T P+ ++KNLR
Sbjct: 775 ELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLR 834
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH+ IK +S + R I VRD+ RFH FK G CSCGDYW
Sbjct: 835 VCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 252/499 (50%), Gaps = 35/499 (7%)
Query: 62 HANVFSFNVLLAAYARQLRIAS----ARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
HAN + ++A AR L S A+QLFDQ P DL +N L+ Y+ C T+ AL
Sbjct: 29 HANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALH 88
Query: 118 LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
LF + D +T+S +++ A S N + +Q+HC + CG H+ SV NSL+ Y+
Sbjct: 89 LFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYT 148
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + + +RVF EMG+ +D VSWNS++ Y +R + +LF M D YT++
Sbjct: 149 KTGNVRDGRRVFDEMGD-RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVS 207
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+++ A + + G+Q HA ++K GF + + LI + +K SG +RD VF+ +
Sbjct: 208 TVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSK-SGMLRDARVVFDNMEN 266
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D V WN+MI+G+ + +A F + G P +F VI +C++L L +
Sbjct: 267 KDSVSWNSMIAGHVINGQ-DLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRV 325
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQH 413
+H T+K + +N+ +V AL+ +KC ++DA LF M + VS +MI+GY Q+
Sbjct: 326 LHCKTLKSGLSTNQ-NVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQN 384
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G +A+ LF M + P + T+ ++L+ H ++E + ++K +E
Sbjct: 385 GDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVFISE--IHAEVIKT--NYEKSSSV 439
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ ++D + G ++DA ++ E +E + + + + YA +
Sbjct: 440 GTALLDAFVKIGNISDAVKVFEL------------------IETKDVIAWSAMLAGYAQA 481
Query: 534 GKWEEVATIRRLMRDRGVQ 552
G+ EE A I + G++
Sbjct: 482 GETEEAAKIFHQLTREGIK 500
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 220/461 (47%), Gaps = 42/461 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G + G+ +H +K + + N + +Y+K G + F++
Sbjct: 104 TMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEM 163
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N LL Y S + DQ+ + LF
Sbjct: 164 GDRDVVSWNSLLTGY-------SWNRFNDQVWE------------------------LFC 192
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + + D +T+S +I A +N + + Q+H L + GF+ V NSL++ S++G
Sbjct: 193 LMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSG 252
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A+ VF M E KD VSWNSM+ + + + LEA + F M T AS++
Sbjct: 253 MLRDARVVFDNM-ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI 311
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPD 297
+ SL++L H +KSG N ++ + L+ KC ++ D +F +
Sbjct: 312 KSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK-EIDDAFSLFSLMHGVQS 370
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
+V W MISGY Q + +DQA+ F + R G P+ ++ +++ + S +IHA
Sbjct: 371 VVSWTAMISGYLQNGD-TDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFIS---EIHA 426
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK + SV AL+ + K GN+ DA ++F+ + + ++ ++M+AGYAQ G
Sbjct: 427 EVIKTNYEKSS-SVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETE 485
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKY 457
EA ++F + I P TF S+++AC A T V +G+++
Sbjct: 486 EAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF 526
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 218/450 (48%), Gaps = 34/450 (7%)
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
T TL L S+N + I+ QLHC A H ++N L S F +
Sbjct: 2 TLNMTLRALTNTSTNPILRIRRYQLHCHANPLLQSHVVALNARTLLRDSDPRFAQQ---- 57
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
++ ++D N ++ Y + + EAL LF + L D YT++ +L+ +
Sbjct: 58 LFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFN 117
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G Q H +K G + +G+ L+D+Y K +G++RD +VF+E+ D+V WN++++
Sbjct: 118 GTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTK-TGNVRDGRRVFDEMGDRDVVSWNSLLT 176
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIR 365
GYS ++DQ F + GY PD + VI+A +N + ++G QIHAL +K+
Sbjct: 177 GYSWNR-FNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFE 235
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ R+ V N+L++M SK G L DAR +FD M ++VS NSMIAG+ +G +EA F
Sbjct: 236 TERL-VCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M PT+ TF SV+ +CA ++ + + +K G + ++ L +
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKS--GLSTNQNVLTALMVALTKC 352
Query: 485 GKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
++ DA L M H +Q + V + + + Y +G ++ +
Sbjct: 353 KEIDDAFSLFSLM-------------HGVQ----SVVSWTAMISGYLQNGDTDQAVNLFS 395
Query: 545 LMRDRGVQKKPG-FSWIEVKKQMH-VFVAE 572
LMR GV KP F++ + H VF++E
Sbjct: 396 LMRREGV--KPNHFTYSTILTVQHAVFISE 423
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 194/400 (48%), Gaps = 41/400 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K+C ++L + LH LK S +N +L
Sbjct: 306 TFASVIKSCASLKELGLVRVLHCKTLK-----SGLSTNQNVL------------------ 342
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-PQPDLVSYNTLISAYADCGDTESALSLF 119
L+ A + I A LF + +VS+ +IS Y GDT+ A++LF
Sbjct: 343 --------TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLF 394
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR + + FT S ++T + I ++H I ++ +SV +LL + + G
Sbjct: 395 SLMRREGVKPNHFTYSTILTV--QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGN 452
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A +VF E+ E KD ++W++M+ Y Q E EA ++F ++ + + +T SI+
Sbjct: 453 ISDAVKVF-ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIIN 511
Query: 240 AFTSLEDLV-GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A T+ V G QFHA+ IK + + S L+ LYAK G++ ++F+ + DL
Sbjct: 512 ACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAK-RGNIESAHEIFKRQKERDL 570
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V WN+MISGY+Q + + +AL F+++ + D +F+ VISAC++ + +GK +
Sbjct: 571 VSWNSMISGYAQHGQ-AKKALEVFEEMQKRNLEVDAITFIGVISACAH-AGLVGKGQNYF 628
Query: 359 TIKIEIRSNRISVN--NALVAMYSKCGNLEDARRLFDRMP 396
I I ++ + ++ +YS+ G L A + + MP
Sbjct: 629 NIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMP 668
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 1 TFRQVLKTCVGRRDLV-TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF ++ C V GK HA +K + + +S+ + LY+K G + +AH F +
Sbjct: 505 TFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKR 564
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ ++ S+N +++ YA+ G + AL +F
Sbjct: 565 QKERDLVSWNSMISGYAQH-------------------------------GQAKKALEVF 593
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC----YS 175
++M+++ + D T G+I+A ++ + K + I DH+ + +C YS
Sbjct: 594 EEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMIN-DHHINPTMEHYSCMIDLYS 652
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G L +A + M W ++ A HR
Sbjct: 653 RAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHR 687
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/710 (36%), Positives = 388/710 (54%), Gaps = 71/710 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +VLK C+ ++DL+ K +H +K+ + +A++ N+ + +Y +CG
Sbjct: 31 YVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECG------------- 77
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
R+ AR +FD + + S+N +I+ Y + E A+ LF++
Sbjct: 78 ------------------RLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFRE 119
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + + T ++ A S + L K++H + G + V +LL Y + G
Sbjct: 120 MCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGS 179
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++EA+R+F + D +SW M+ AY Q G EA +L +M + T SIL
Sbjct: 180 INEARRIFDNLMN-HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILN 238
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A S L + H H + +G + +G+ L+ +YAK SG + D VF+ + D+V
Sbjct: 239 ACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK-SGSIDDARVVFDRMKVRDVV 297
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH-- 356
WN MI +++ +A F ++ G PD F+ +++AC++ K+IH
Sbjct: 298 SWNVMIGAFAEHGR-GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRH 356
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
AL +E+ + V ALV MYSK G+++DAR +FDRM N VS N+MI+G AQHG+G
Sbjct: 357 ALDSGLEVD---VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLG 413
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+AL +F M + P +TFV+VLSAC+H G V EG+ + M ++G EP+ H +C
Sbjct: 414 QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNC 473
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSN 519
M+DLLGRAG+L +A+ I+ M +P G++ L A L+L+P N
Sbjct: 474 MVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKN 533
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
A YV+L+NIYA +GKW+ V+ +R +MR+RG++K+PG SWIEV ++H F+ D SHP
Sbjct: 534 AATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPEC 593
Query: 580 KEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEP 627
KEI+ +++ K+K GY+P DKE + HSEKLA+ +GL+ T G P
Sbjct: 594 KEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNP 653
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLR+C DCH A K IS + GREI VRD RFH FKDG CSCGDYW
Sbjct: 654 IRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 179/351 (50%), Gaps = 24/351 (6%)
Query: 222 MVSLQLGL--DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
M LQ GL D + +L +DL+ Q H +IKS QN+H+ + L+ +Y +C
Sbjct: 17 MNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIEC 76
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G +++ VF+ + + WN MI+GY + ++++ A+ F+++ G P+ +++
Sbjct: 77 -GRLQEARCVFDALVKKSGASWNAMIAGYVE-HKHAEDAMRLFREMCHEGVQPNAGTYMI 134
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
++ AC++LS GK++HA + S+ + V AL+ MY KCG++ +ARR+FD + H
Sbjct: 135 ILKACASLSALKWGKEVHACIRHGGLESD-VRVGTALLRMYGKCGSINEARRIFDNLMNH 193
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ +S MI YAQ G G EA RL M + P IT+VS+L+ACA G + ++
Sbjct: 194 DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP--------GSIALKAAN 510
D G E + + ++ + ++G + DA + + M G+ A
Sbjct: 254 RHALDA-GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRG 312
Query: 511 H-----FLQLEPS----NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
H FLQ++ +A+ ++ + N A++G E V I R D G++
Sbjct: 313 HEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 150/359 (41%), Gaps = 47/359 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L C L K +H L + + + +Y+K G + A F++
Sbjct: 232 TYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ +V S+NV++ A+A R A LF Q+ +PD + + ++++A A G E
Sbjct: 292 KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE--- 348
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+K++H A+ G + V +L+ YS+
Sbjct: 349 ------------------------------WVKKIHRHALDSGLEVDVRVGTALVHMYSK 378
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G +D+A+ VF M ++++ VSWN+M+ QH G +AL++F+ M + + D T +
Sbjct: 379 SGSIDDARVVFDRM-KVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVA 437
Query: 237 ILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L+A S LV G Q+ A G + + ++DL + M + +
Sbjct: 438 VLSA-CSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAV 496
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
PD W ++ Y + LG R+ P + + ++ SN+ GK
Sbjct: 497 DPDEATWGALLGSC---RTYGNVELGELVAKERLKLDPKNAATYVLL---SNIYAEAGK 549
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/518 (43%), Positives = 328/518 (63%), Gaps = 37/518 (7%)
Query: 192 EIKDEVSWNSMVVAYGQHREGLE--ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
E DEVSWNS+++ G REG E AL FQ+M S + +D YTL S+L +F S++ +
Sbjct: 2 EFDDEVSWNSLIL--GCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQN 59
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
+ H +IK+GF + + LID+YAK G + + VF ++ D+V W ++++GYS
Sbjct: 60 AISVHCLIIKTGFEAYKLVNNALIDMYAK-QGKLDCAIMVFSKMVDKDVVSWTSLVTGYS 118
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
Y ++A+ F K+ G +PD + V+SAC+ L+ G+QIHA +K + S+
Sbjct: 119 HNGSY-EEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESS- 176
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+SV+N+LV MY+KCG++ DA R FD MP + +S ++I GYAQ+G G +L+ ++ M+
Sbjct: 177 LSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
T P ITF+ +L AC+H G + G+ YF M ++G +P EHY+CMIDLLGR+GKL
Sbjct: 237 TGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLA 296
Query: 489 DAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYA 531
+A+ L+ M P ++ K AA + +LEP N++PYVML+N+Y+
Sbjct: 297 EAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYS 356
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSR 591
A+GKWE+ A IRRLMR RG+ K+PG+SWIE ++ F++ED +HP+ EI++ ++E+
Sbjct: 357 AAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIM 416
Query: 592 KMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
+K+AGYVPD KE L +HSEKLAVAFGLL+ G PI + KNLR+CGD
Sbjct: 417 LIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGD 476
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CH A+K+ S + R I +RD+ FH F +GRCSCGDYW
Sbjct: 477 CHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 144/306 (47%), Gaps = 14/306 (4%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+Q ++ A +F ++ D+VS+ +L++ Y+ G E A+ LF MR
Sbjct: 80 NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVY 139
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D ++ +++A + + +Q+H + G + SV+NSL+T Y++ G + +A R
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M +D +SW +++V Y Q+ G +LQ + +M++ D T +L A +
Sbjct: 200 FDNM-PTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGL 258
Query: 247 LVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE-IPQPDLVLWNTM 304
L G + + K G + +IDL + SG + + + + + PD V+W +
Sbjct: 259 LGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGR-SGKLAEAKGLLNQMVVAPDAVVWKAL 317
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHP-DDCSFVCVISACSNLSPSLGKQIHALTIKIE 363
++ +E LG N P + +V + SN+ + GK A I+
Sbjct: 318 LAACRVHKELE---LGEMAAKNLFELEPMNSMPYVML----SNMYSAAGKWEDAARIRRL 370
Query: 364 IRSNRI 369
+RS I
Sbjct: 371 MRSRGI 376
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 46/216 (21%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C + G+ +HA +K+ + S + N + +Y+KCG
Sbjct: 148 VLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCG---------------- 191
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
I A + FD +P D++S+ LI YA G + +L + M
Sbjct: 192 ---------------SIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236
Query: 125 KRFDTDGFTLSGLITASSNNLCL---------IKQLHCLAIYCGFDHYASVNNSLLTCYS 175
D T GL+ A S+N L + +++ I G +HYA + + L
Sbjct: 237 TGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVY--GIKPGPEHYACMIDLL----G 290
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
R+G L EAK + +M D V W +++ A H+E
Sbjct: 291 RSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKE 326
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/694 (36%), Positives = 386/694 (55%), Gaps = 72/694 (10%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G +H + +KN + + +SN I LY KCG
Sbjct: 217 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCG----------------------------- 247
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
+ AR LFD+ +V++N++IS YA G AL +F MR + + +
Sbjct: 248 --NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASI 305
Query: 138 ITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
I +N L +QLHC + GF ++ +L+ YS+ + +A R+F E G + +
Sbjct: 306 IKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGN 365
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VSW +M+ + Q+ EA+ LF EM + + +T + ILTA ++ + HA
Sbjct: 366 VVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHA 421
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
++K+ + ++S +G+ L+D Y K G + + KVF I D+V W+ M++GY+Q E +
Sbjct: 422 QVVKTNYERSSTVGTALLDAYVKL-GKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGE-T 479
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG--KQIHALTIKIEIRSNRISVNN 373
+ A+ F +L + G P++ +F +++ C+ + S+G KQ H IK + S+ + V++
Sbjct: 480 EAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSS-LCVSS 538
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL+ MY+K G++E A +F R E + VS NSMI+GYAQHG M+AL +F+ M + +
Sbjct: 539 ALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 598
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
++TF+ V +AC H G V EG+KYF +M P EH SCM+DL RAG+L A ++
Sbjct: 599 DSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 658
Query: 494 IEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKW 536
I+ MP GS + AA + + P ++ YV+L+N+YA SG W
Sbjct: 659 IDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDW 718
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
+E A +R+LM +R V+K+PG+SWIEVK + + F+A D SHP+ +I+ LE++S ++K
Sbjct: 719 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDL 778
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY PD KE L HSE+LA+AFGL++T G P+L++KNLR+CGDCH I
Sbjct: 779 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVI 838
Query: 645 KFISAIAGREITVRDTYRFHCF-KDGRCSCGDYW 677
K I+ I REI VRD+ RFH F DG CSCGD+W
Sbjct: 839 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 211/391 (53%), Gaps = 11/391 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + R +FD++ + ++V++ TLIS YA E L+LF M+++ +
Sbjct: 138 LVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPN 197
Query: 131 GFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT + + + + Q+H + + G D V+NSL+ Y + G + +A R+ +
Sbjct: 198 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RILF 256
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E+K V+WNSM+ Y + LEAL +F M + L + ASI+ +L++L
Sbjct: 257 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELR 316
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
Q H ++K GF + +I + L+ Y+KC M D +++F+E ++V W MISG
Sbjct: 317 FTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA-MLDALRLFKETGFLGNVVSWTAMISG 375
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSN 367
+ Q + ++A+G F ++ R G P++ ++ +++A +SPS ++HA +K +
Sbjct: 376 FLQNDG-KEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPS---EVHAQVVKTNYERS 431
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+V AL+ Y K G +++A ++F + + V+ ++M+AGYAQ G A+++F +
Sbjct: 432 S-TVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELT 490
Query: 428 ETNIPPTNITFVSVLSAC-AHTGKVAEGQKY 457
+ + P TF S+L+ C A T + +G+++
Sbjct: 491 KGGVKPNEFTFSSILNVCAATTASMGQGKQF 521
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 187/385 (48%), Gaps = 14/385 (3%)
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
+F + A R+ A LFD+ P D SY +L+ ++ G T+ A LF +++
Sbjct: 33 NFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLG 92
Query: 127 FDTDGFTLSGLITASSNNLC---LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ D S ++ S+ LC +QLHC I GF SV SL+ Y + +
Sbjct: 93 MEMDCSIFSSVLKVSA-TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 151
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+ VF EM E ++ V+W +++ Y ++ E L LF M + +T A+ L
Sbjct: 152 RNVFDEMKE-RNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLA- 209
Query: 244 LEDLVG--GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
E+ VG GLQ H ++K+G + + + LI+LY KC G++R +F++ +V W
Sbjct: 210 -EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC-GNVRKARILFDKTEVKSVVTW 267
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N+MISGY+ +ALG F + + SF +I C+NL +Q+H +
Sbjct: 268 NSMISGYAA-NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVV 326
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEA 419
K ++ ++ AL+ YSKC + DA RLF N VS +MI+G+ Q+ EA
Sbjct: 327 KYGFVFDQ-NIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEA 385
Query: 420 LRLFEWMLETNIPPTNITFVSVLSA 444
+ LF M + P T+ +L+A
Sbjct: 386 VGLFSEMKRKGVRPNEFTYSVILTA 410
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 214/470 (45%), Gaps = 47/470 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F ++K C ++L + LH +K F + ++ YSKC + A F +T
Sbjct: 301 SFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKET 360
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F NV VS+ +IS + E A+ LF
Sbjct: 361 G----FLGNV--------------------------VSWTAMISGFLQNDGKEEAVGLFS 390
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ K + FT S ++TA L +I ++H + ++ ++V +LL Y + G
Sbjct: 391 EMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 446
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+DEA +VF + KD V+W++M+ Y Q E A+++F E+ + + +T +SIL
Sbjct: 447 KVDEAAKVFSGIDN-KDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSIL 505
Query: 239 TAFTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ +G G QFH IKS + + S L+ +YAK G + +VF+ + D
Sbjct: 506 NVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK-KGHIESAEEVFKRQREKD 564
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
LV WN+MISGY+Q + + +AL FK++ + D +F+ V +AC++ + +
Sbjct: 565 LVSWNSMISGYAQHGQ-AMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKY- 622
Query: 358 LTIKIEIRSNRISV----NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
I +R +I+ N+ +V +YS+ G LE A ++ D MP ++ I +
Sbjct: 623 --FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRV 680
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
E RL + IP + +V + + A +G E K +M +
Sbjct: 681 HKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 730
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 169/324 (52%), Gaps = 8/324 (2%)
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D S+ S++ + + EA +LF + L + +D +S+L +L D + G Q
Sbjct: 60 RDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQL 119
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H IK GF + +G+ L+D Y K S + +D VF+E+ + ++V W T+ISGY+ +
Sbjct: 120 HCQCIKFGFLDDVSVGTSLVDTYMKGS-NFKDGRNVFDEMKERNVVTWTTLISGYA-RNS 177
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVN 372
+++ L F ++ G P+ +F + + G Q+H + +K + I V+
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL-DKTIPVS 236
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N+L+ +Y KCGN+ AR LFD+ + V+ NSMI+GYA +G+ +EAL +F M ++
Sbjct: 237 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVR 296
Query: 433 PTNITFVSVLSACAHTGKVA-EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+ +F S++ CA+ ++ Q + S++K +GF + + ++ + + DA
Sbjct: 297 LSESSFASIIKLCANLKELRFTEQLHCSVVK--YGFVFDQNIRTALMVAYSKCMAMLDAL 354
Query: 492 RLIEAMPFNPGSIALKAA-NHFLQ 514
RL + F ++ A + FLQ
Sbjct: 355 RLFKETGFLGNVVSWTAMISGFLQ 378
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/648 (36%), Positives = 371/648 (57%), Gaps = 37/648 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A++ FN L+ +Y + + A QLF ++P D VS+N +I+ Y G E AL LF M
Sbjct: 176 ASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQM 235
Query: 123 REKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R F GFT + ++ S S ++ +Q+H LAI + V N+LL YS++ ++
Sbjct: 236 RNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYI 295
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D AK +F EM E+ D VS+N ++ Y + + ++ LF+ + + A++L+
Sbjct: 296 DLAKNLFDEMPEL-DGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSV 354
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+L G Q HA + + +G+ L+D+YAKC D ++F + + V
Sbjct: 355 AAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCE-KFEDANRIFANLAYRNSVP 413
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
W +IS Y QK + ++AL FK++NR H D +F + A +NL S SLGKQ+H+
Sbjct: 414 WTAIISIYVQKG-FHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSV 472
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I++ + S+ S + LV MY+ CG+++DA +F MP+ N V N++I+ Y+Q+G
Sbjct: 473 IRLGLLSSVFS-GSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEAT 531
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
F M+E+ + P +++F+SVL+AC+H G V + YF+ M ++ +P +HY+ MID
Sbjct: 532 FSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMID 591
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP-SNAV 521
+L R+G+ +AE LI MPF P + A KAA+ +++ +A
Sbjct: 592 VLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAA 651
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV ++NIYA +GKWE A +++ MR+RGV+K +SW+E+ ++HVF A D +HP ++
Sbjct: 652 AYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQ 711
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I + + M + GY PD K + L +HSE+LA+AF L++T G PI+
Sbjct: 712 IRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPII 771
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLR C DCH AIK IS I GREITVRD+ RFH F+DG CSCGDYW
Sbjct: 772 IMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 231/453 (50%), Gaps = 10/453 (2%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
++ A F++ + N S N++++ Y + + AR+LF+ + + VS+ +I Y+
Sbjct: 62 IAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQN 121
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVN 167
+ A +L+ +M D T + L++ + L + Q+H I GF V
Sbjct: 122 NQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVF 181
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSL+ Y + LD A ++F EM KD VS+N M+ Y ++ EAL+LF +M ++
Sbjct: 182 NSLVDSYCKTCCLDIASQLFSEM-PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDF 240
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+T A++L ED++ G Q H IK+ + + + + L+D Y+K D D
Sbjct: 241 QPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSK--HDYIDLA 298
Query: 288 K-VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS-ACS 345
K +F+E+P+ D V +N +I+GY+ +Y +++ FK+L + + F ++S A
Sbjct: 299 KNLFDEMPELDGVSYNIIITGYAWNGQY-EKSFDLFKRLQGTSFDRKNFPFATMLSVAAI 357
Query: 346 NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ S+G+Q HA + + + + V NALV MY+KC EDA R+F + N+V +
Sbjct: 358 ELNLSMGRQTHAQAV-VTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTA 416
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+I+ Y Q G EAL++F+ M N+ TF S L A A+ V+ G++ S + +
Sbjct: 417 IISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRL- 475
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G S ++D+ G + DA + + MP
Sbjct: 476 GLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP 508
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 211/451 (46%), Gaps = 38/451 (8%)
Query: 109 CGDTESALSLFKDMR--EKRFDTD----GFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
CG +E + + D R + FD + F L L+ A N + +QL Y
Sbjct: 22 CGFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRA--NQIAKARQLFDEMPY----R 75
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
S N +++ Y ++ L A+ +F M ++EVSW M+ Y Q+ + EA L+ EM
Sbjct: 76 NTSSVNMMVSGYVKSRNLFRARELFESMFS-RNEVSWTIMIGGYSQNNQPKEAFNLYTEM 134
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK-CSG 281
+ D T A++L+ F L LQ H+H+I+ GF + + + L+D Y K C
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
D+ ++F E+P D V +N MI+GY+ K + ++AL F ++ + + P +F ++
Sbjct: 195 DI--ASQLFSEMPTKDSVSFNVMITGYT-KYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Query: 342 S-ACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
+ + G+QIH L IK + I V NAL+ YSK ++ A+ LFD MPE +
Sbjct: 252 GMSVGSEDVIFGQQIHGLAIKTSYVWD-IFVANALLDFYSKHDYIDLAKNLFDEMPELDG 310
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
VS N +I GYA +G ++ LF+ + T+ N F ++LS A ++ G++ +
Sbjct: 311 VSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQ 370
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
E + + ++D+ + K DA R+ F L N+
Sbjct: 371 AVVTTAVS-EVQVGNALVDMYAKCEKFEDANRI------------------FANLAYRNS 411
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
VP+ + +IY G EE + + M V
Sbjct: 412 VPWTAIISIYVQKGFHEEALKMFKEMNRENV 442
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/785 (32%), Positives = 408/785 (51%), Gaps = 112/785 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +V K C ++ GK ++ L ++ + + ++ KCG + A F +
Sbjct: 192 VFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESA- 115
+ +VF +N++++ Y + A + + +PD V++N +IS YA G E A
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS 311
Query: 116 -----------------------------------LSLFKDMREKRFDTDGFTLSGLITA 140
LS+F+ M + + T++ ++A
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371
Query: 141 SSNNLCLIKQLHCLAIYCG---------------FDHYASVN------------------ 167
+N L L++ + YC D+YA
Sbjct: 372 CTN-LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 430
Query: 168 --NSLLTCYSRNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
N++L Y+ G +EA + EM G D ++WN +V + Q+ +G AL+ FQ M
Sbjct: 431 SWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
S+ + + T++ L A + +L G + H +++++ ++ +GS LI +Y+ C
Sbjct: 491 HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
C VF E+ D+V+WN++IS +Q S AL +++N + + V +
Sbjct: 551 EVAC-SVFSELSTRDVVVWNSIISACAQSGR-SVNALDLLREMNLSNVEVNTVTMVSALP 608
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
ACS L+ GK+IH I+ + + + N+L+ MY +CG+++ +RR+FD MP+ + V
Sbjct: 609 ACSKLAALRQGKEIHQFIIRCGLDTCNF-ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 667
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S N MI+ Y HG GM+A+ LF+ + P +ITF ++LSAC+H+G + EG KYF MM
Sbjct: 668 SWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------I 504
K + +P E Y+CM+DLL RAG+ + IE MPF P + +
Sbjct: 728 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 787
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AA + +LEP ++ YV++ANIY+A+G+WE+ A IR LM++RGV K PG SWIEVK+
Sbjct: 788 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
++H FV D SHP++++I +E + +K+ GYVPD KE L HSEK
Sbjct: 848 KLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEK 907
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
+A+AFGL+ST+ G P+ ++KNLR+CGDCH+A KFIS + R+I +RD YRFH F DG CS
Sbjct: 908 IALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCS 967
Query: 673 CGDYW 677
CGDYW
Sbjct: 968 CGDYW 972
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 154/671 (22%), Positives = 266/671 (39%), Gaps = 159/671 (23%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+ C +L G +HA + N V +L + + +Y + GC
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC------------ 139
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ AR++FD++ + ++ S+ ++ Y GD E + LF
Sbjct: 140 -------------------VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D F + A S N + K ++ + GF+ + V S+L + + G
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 180 LDEAKRVFYEM------------------GEIK----------------DEVSWNSMVVA 205
+D A+R F E+ GE K D+V+WN+++
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 206 YGQHREGLEALQLFQEMVSL------------------QLGLDM---------------- 231
Y Q + EA + F EM L Q G D
Sbjct: 301 YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360
Query: 232 --YTLASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
T+AS ++A T+L L G + H + IK + +G+ L+D YAKC + +
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR-SVEVARR 419
Query: 289 VFEEIPQPDLVLWNTMISGYSQK--------------------------------EEYSD 316
F I Q DLV WN M++GY+ + +Y D
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479
Query: 317 --QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNN 373
AL F++++ +G P+ + ++AC + + LGK+IH ++ I + V +
Sbjct: 480 GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS-TGVGS 538
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL++MYS C +LE A +F + + V NS+I+ AQ G + AL L M +N+
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+T VS L AC+ + +G++ + G + + +ID+ GR G + + R+
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 494 IEAMP-------------FNPGSIALKAANHFLQLEPSNAVP-YVMLANIYAA---SGKW 536
+ MP + + A N F Q P ++ N+ +A SG
Sbjct: 658 FDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLI 717
Query: 537 EEVATIRRLMR 547
EE ++M+
Sbjct: 718 EEGWKYFKMMK 728
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 270/772 (34%), Positives = 413/772 (53%), Gaps = 116/772 (15%)
Query: 18 GKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
+++HA L + PF + N I Y K + A + F++ ++ + +L+AY+
Sbjct: 15 ARAVHAHILTSGFKPFPLII-NRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYS 73
Query: 77 RQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
I A QLF+ P D VSYN +I+A++ D +AL LF M+ F D FT
Sbjct: 74 AAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTF 133
Query: 135 SGLITASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG---------FLDE 182
S ++ A S + +QLHC G SV N+L++CY +
Sbjct: 134 SSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAA 193
Query: 183 AKRVFYEM---------------GEIKDE-----------------VSWNSMVVAYGQHR 210
A+++F E G ++++ V+WN+M+ Y
Sbjct: 194 ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRG 253
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH--- 267
EA L + M SL + LD YT S+++A ++ G Q HA+++++ + H
Sbjct: 254 FYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVL 313
Query: 268 -IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN------------------------ 302
+ + LI LY +C G + + +VF+++P DLV WN
Sbjct: 314 SVNNALITLYTRC-GKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPV 372
Query: 303 -------TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
MISG +Q + ++ L F ++ G P D ++ I++CS L S G+Q
Sbjct: 373 RSLLTWTVMISGLAQNG-FGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQ 431
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H+ I++ S+ +SV NAL+ MYS+CG +E A +F MP ++VS N+MIA AQHG
Sbjct: 432 LHSQIIQLGHDSS-LSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHG 490
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G++A++L+E ML+ +I P ITF+++LSAC+H G V EG+ YF M+ +G PE +HY
Sbjct: 491 HGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHY 550
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
S +IDLL RAG ++A+ + E+MPF PG+ + ++AA+ L+L P
Sbjct: 551 SRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMP 610
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
Y+ L+N+YAA G+W+EVA +R+LMR+RGV+K+PG SWIEV+ +HVF+ +D HP
Sbjct: 611 QQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHP 670
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+ ++ YLE++ +M++ GYVPD KE L HSEKLAV +G++ G
Sbjct: 671 EVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLG 730
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLRICGDCHNA K+IS + REI VRD RFH F++G CSC +YW
Sbjct: 731 ATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 90/230 (39%), Gaps = 39/230 (16%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
+ +C L G+ LH+ ++ S + N I +YS+CG + AA F + +
Sbjct: 417 IASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDS 476
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKD 121
S+N ++AA A+ A QL++++ + PD +++ T++SA + G + F
Sbjct: 477 VSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDT 536
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
MR C I DHY+ L+ R G
Sbjct: 537 MRV----------------------------CYGITPEEDHYS----RLIDLLCRAGMFS 564
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLG 228
EAK V M W +++ +G G++A E++ Q G
Sbjct: 565 EAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDG 614
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
S + +HA + + + +N L+ Y K N+ AR LFD++P+ + V+ +M++
Sbjct: 13 SFARAVHAHILTSGFKPFPLIINR-LIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSA 71
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNI----TFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
Y+ G A +LF N P +I ++ ++++A +H+ + F MK +
Sbjct: 72 YSAAGNIKLAHQLF------NATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRL- 124
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAE 491
GF P+ +S +LG + D E
Sbjct: 125 GFVPDPFTFS---SVLGALSLIADEE 147
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/709 (36%), Positives = 394/709 (55%), Gaps = 64/709 (9%)
Query: 23 ALYLKNLVPFSAYLS-NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRI 81
AL + N +P + +S N I Y + S A F++ ++FS+NV+L Y R R+
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRL 124
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
A +LFD +P+ D+VS+N ++S YA G + A +F M + + + +GL+ A
Sbjct: 125 GEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAY 180
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+N L + ++ + N L+ Y + L +A+++F M ++D +SWN+
Sbjct: 181 VHNGRLKEARRLFESQSNWELISW--NCLMGGYVKRNMLGDARQLFDRM-PVRDVISWNT 237
Query: 202 MVVAYGQHREGLEALQLFQE-----------MVS--LQLGL-----DMYTLASILTAFTS 243
M+ Y Q + +A +LF E MVS +Q G+ + + +
Sbjct: 238 MISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISY 297
Query: 244 LEDLVGGLQFHAHLIKSGFHQ-----NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
L G +Q+ +I + N + +I Y + +G + K+F+ +PQ D
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQ-NGGIAQARKLFDMMPQRDC 356
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W +ISGY+Q Y ++AL F ++ R G + +F C +S C++++ LGKQ+H
Sbjct: 357 VSWAAIISGYAQNGHY-EEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHG 415
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + V NAL+ MY KCG+ ++A +F+ + E + VS N+MIAGYA+HG G
Sbjct: 416 QVVKAGFETG-CFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGR 474
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL LFE M + + P IT V VLSAC+H+G + G +YF M + +P +HY+CM
Sbjct: 475 QALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCM 534
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
IDLLGRAG+L +AE L+ MPF+PG+ + KAA ++EP N+
Sbjct: 535 IDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNS 594
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YAASG+W +V +R MR+ GVQK G+SW+EV+ ++H F D HP
Sbjct: 595 GMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKD 654
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I+ +LEE+ KM++ GYV +KE L +HSEKLAVAFG+L+ G PI
Sbjct: 655 RIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPI 714
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
VMKNLR+C DCHNAIK IS I GR I +RD++RFH F +G CSCGDYW
Sbjct: 715 RVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 203/441 (46%), Gaps = 52/441 (11%)
Query: 35 YLSNHFILLYSKCGCLSAAHHAFNQTQHA-----------NVFSFNVLLAAYARQLRIAS 83
Y+ H + S+C C + + + ++ ++ ++ ++N ++++ R S
Sbjct: 5 YVVRHLRMRNSRCLCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDS 64
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A ++F+ +P+ VSYN +IS Y + SL +D+ +K + D F+ + ++T
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYL----RNAKFSLARDLFDKMPERDLFSWNVMLTGYVR 120
Query: 144 NLCLIKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
N L + H L FD + N++L+ Y++NGF+DEA+ VF +M ++ +SW
Sbjct: 121 NRRL-GEAHKL-----FDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH-RNSISW 173
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLI 258
N ++ AY + EA +LF+ Q ++ + ++ + L Q F +
Sbjct: 174 NGLLAAYVHNGRLKEARRLFES----QSNWELISWNCLMGGYVKRNMLGDARQLFDRMPV 229
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+ N+ +I YA+ GD+ ++F E P D+ W M+SGY Q D+A
Sbjct: 230 RDVISWNT-----MISGYAQV-GDLSQAKRLFNESPIRDVFTWTAMVSGYVQN-GMVDEA 282
Query: 319 LGCFKKL---NRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
F ++ N + Y+ +V K + A + + IS N +
Sbjct: 283 RKYFDEMPVKNEISYNAMLAGYV-----------QYKKMVIAGELFEAMPCRNISSWNTM 331
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+ Y + G + AR+LFD MP+ + VS ++I+GYAQ+G EAL +F M
Sbjct: 332 ITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNR 391
Query: 436 ITFVSVLSACAHTGKVAEGQK 456
TF LS CA + G++
Sbjct: 392 STFSCALSTCADIAALELGKQ 412
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 41/259 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L TC L GK +H +K ++ N + +Y KCG A+ F
Sbjct: 393 TFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGI 452
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+N ++A YAR G AL LF+
Sbjct: 453 EEKDVVSWNTMIAGYARH-------------------------------GFGRQALVLFE 481
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY----SR 176
M++ D T+ G+++A S++ LI + D+ + TC R
Sbjct: 482 SMKKAGVKPDEITMVGVLSACSHS-GLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGR 540
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G L+EA+ + M SW +++ A +G G +A ++ +M G MY
Sbjct: 541 AGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSG--MYV 598
Query: 234 LASILTAFTSLEDLVGGLQ 252
L S L A + VG ++
Sbjct: 599 LLSNLYAASGRWVDVGKMR 617
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
++ + I N ++ + + G+ + A R+F+ MP ++VS N+MI+GY ++ A
Sbjct: 39 VKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARD 98
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMID 479
LF+ M E ++ N+ +L+ ++ E K F +M KD+ ++ M+
Sbjct: 99 LFDKMPERDLFSWNV----MLTGYVRNRRLGEAHKLFDLMPKKDVVS-------WNAMLS 147
Query: 480 LLGRAGKLTDAERLIEAMP 498
+ G + +A + MP
Sbjct: 148 GYAQNGFVDEAREVFNKMP 166
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/719 (36%), Positives = 396/719 (55%), Gaps = 68/719 (9%)
Query: 15 LVTGKSLHALYLKNLVP-FSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
+ TG+ AL + +P +S+ N I Y + G A F++ ++ S+NV++
Sbjct: 70 MRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIK 129
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
Y R + AR+LF+++P+ D+ S+NT++S YA G + A +F M EK +
Sbjct: 130 GYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNAL 189
Query: 134 LSGLIT-----------ASSNNLCLI----------KQLHCLAIYCGFDHYASVN----N 168
LS + S N L+ K+ + FD + N
Sbjct: 190 LSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWN 249
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
+++T Y++NG +DEA+++F E + D +W +MV Y Q+R EA +LF M
Sbjct: 250 TIITGYAQNGEIDEARQLFDE-SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER--- 305
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ + ++L + E + + L +N + +I YA+C G + +
Sbjct: 306 -NEVSWNAMLAGYVQGERV----EMAKELFDVMPCRNVSTWNTMITGYAQC-GKISEAKN 359
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL- 347
+F+++P+ D V W MI+GYSQ +S +AL F + R G + SF +S C+++
Sbjct: 360 LFDKMPKRDPVSWAAMIAGYSQSG-HSYEALRLFVLMEREGGRLNRSSFSSALSTCADVV 418
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+ LGKQ+H +K + V NAL+ MY KCG++E+A LF M + VS N+MI
Sbjct: 419 ALELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 477
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
AGY++HG G EALR FE M + P + T V+VLSAC+HTG V +G++YF M +G
Sbjct: 478 AGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGV 537
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAAN 510
P +HY+CM+DLLGRAG L +A L++ MPF P + +A AA+
Sbjct: 538 RPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 597
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+EP N+ YV+L+N+YA+SG+W +V +R MRD+GV+K PG+SWIE++ + H F
Sbjct: 598 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 657
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFG 618
D HP EI +LE++ +MK+AGYV +KE+ + +HSE+LAVA+G
Sbjct: 658 VGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYG 717
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++ S G PI V+KNLR+C DCHNAIK+++ + GR I +RD RFH FKDG CSCGDYW
Sbjct: 718 IMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 41/396 (10%)
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
++ +++ +NV +++Y R R + A ++F ++P+ VSYN +IS Y G+ E A L
Sbjct: 53 KSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARML 112
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN----NSLLTCY 174
F +M E+ + + G + + NL ++L F+ + N++L+ Y
Sbjct: 113 FDEMPERDLVSWNVMIKGYV--RNRNLGKAREL--------FERMPERDVCSWNTILSGY 162
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++NG +D+A+RVF M E K++VSWN+++ AY Q+ + EA LF + L +
Sbjct: 163 AQNGCVDDARRVFDRMPE-KNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL----VSW 217
Query: 235 ASILTAFTSLEDLVGGLQFHAHL-IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+L F + +V QF + ++ N+ +I YA+ +G++ + ++F+E
Sbjct: 218 NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNT-----IITGYAQ-NGEIDEARQLFDES 271
Query: 294 PQPDLVLWNTMISGYSQKE--EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
P D+ W M+SGY Q E + + + N V ++ +V
Sbjct: 272 PVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYV------------Q 319
Query: 352 GKQIHALTIKIEIRSNR-ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+++ ++ R +S N ++ Y++CG + +A+ LFD+MP+ + VS +MIAGY
Sbjct: 320 GERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 379
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+Q G EALRLF M +F S LS CA
Sbjct: 380 SQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCA 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSLGKQI 355
D+ WN IS Y + S +AL FK++ R S+ +IS N L + +
Sbjct: 58 DIKEWNVAISSYMRTGRCS-EALRVFKRMPRW----SSVSYNAMISGYLRNGEFELARML 112
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
E+ + N ++ Y + NL AR LF+RMPE + S N++++GYAQ+G
Sbjct: 113 FD-----EMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
+A R+F+ M E N ++++ ++LSA K+ E F ++ ++
Sbjct: 168 VDDARRVFDRMPEKN----DVSWNALLSAYVQNSKLEEACVLFGSRENWALVS-----WN 218
Query: 476 CMIDLLGRAGKLTDAERLIEAM 497
C++ + K+ +A + ++M
Sbjct: 219 CLLGGFVKKKKIVEARQFFDSM 240
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 98/260 (37%), Gaps = 43/260 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L TC L GK LH +K ++ N +L+Y KCG + A+ F +
Sbjct: 406 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 465
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N ++A Y+R G E AL F+
Sbjct: 466 AGKDIVSWNTMIAGYSRH-------------------------------GFGEEALRFFE 494
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGF----DHYASVNNSLLTC 173
M+ + D T+ +++A S+ + K H + G HYA ++
Sbjct: 495 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYA----CMVDL 550
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMY 232
R G L+EA + M D W +++ A H A ++ +++ MY
Sbjct: 551 LGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 610
Query: 233 TLASILTAFTSLEDLVGGLQ 252
L S L A + VG L+
Sbjct: 611 VLLSNLYASSGRWGDVGKLR 630
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/763 (34%), Positives = 403/763 (52%), Gaps = 106/763 (13%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCG----CLSAAHHAFNQTQHA--NVFSFNVL 71
G+++HA +K + SAYL N+ + Y++ G C A F+ +A N F++N L
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
L+ YA+ R+A AR +F Q+P+ D VS+ ++ G A+ F DM +
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 132 FTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
F L+ +++ A++ + +++H I G V NS+L Y + G + A+ VF
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 190 MGEIKDEVSWNSMVVAY-----------------------------GQHREGLE--ALQL 218
M +++ E SWN+MV Y G ++ GL+ AL+
Sbjct: 224 M-KVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKF 282
Query: 219 FQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
F M++ + D +T+ S+L+A +L L G Q H++++++G +S I + LI YA
Sbjct: 283 FSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 278 KCS--------------------------------GDMRDCMKVFEEIPQPDLVLWNTMI 305
K GD + +VF+ + D++ W MI
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEI 364
GY Q + +D+A+ F+ + R G P+ + V+SAC++L+ GKQIH I+ +
Sbjct: 403 VGYEQNGQ-NDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIR-SL 460
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ +SV+NA++ +Y++ G++ ARR+FD++ TV+ SMI AQHG+G +A+ LF
Sbjct: 461 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLF 520
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E ML + P +T++ V SAC H G + +G++Y+ M + G PE HY+CM+DLL R
Sbjct: 521 EEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLAR 580
Query: 484 AGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVML 526
AG LT+A I+ MP P ++ A AA L ++P N+ Y L
Sbjct: 581 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSAL 640
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
AN+Y+A G+W + A I +L +D+ V+K+ GFSW V+ ++HVF A+D HP I
Sbjct: 641 ANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKA 700
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
EM ++K+AG+VPD KE+ L HSEKLA+AFGL+ST + +MKNL
Sbjct: 701 AEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNL 760
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+C DCH AIKFIS + REI VRD RFH F+DG CSC DYW
Sbjct: 761 RVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 184/367 (50%), Gaps = 15/367 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R L GK +H+ L+ +P+S+ + N I Y+K G + A ++
Sbjct: 298 TVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKA 357
Query: 61 QHA--NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
A NV SF LL Y + AR++FD + D++++ +I Y G + A+ L
Sbjct: 358 VVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMEL 417
Query: 119 FKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + + TL+ +++A ++ L KQ+HC AI + SV+N+++T Y+R
Sbjct: 418 FRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYAR 477
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G + A+RVF ++ K+ V+W SM+VA QH G +A+ LF+EM+ + + D T
Sbjct: 478 SGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIG 537
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +A T + G +++ ++ + SH ++DL A+ +G + + + + +P
Sbjct: 538 VFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYAC-MVDLLAR-AGLLTEAHEFIQRMP 595
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
PD V+W ++++ ++ L K L+ PD+ SA +N+ + G+
Sbjct: 596 VAPDTVVWGSLLAACRVRKNADLAELAAEKLLS---IDPDNSG---AYSALANVYSACGR 649
Query: 354 QIHALTI 360
A I
Sbjct: 650 WNDAARI 656
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 39/188 (20%)
Query: 347 LSPSLGKQIHALTIKIEI-------------------------------------RSNRI 369
++PS G+ IHA +K + R N
Sbjct: 39 VNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAF 98
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+ N+L++MY+K G L DAR +F +MPE + VS M+ G + G +A++ F M+
Sbjct: 99 TW-NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE 157
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P+ +VLS+CA T G+K S + + G + ++ + G+ G
Sbjct: 158 GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKL-GLSSCVPVANSVLYMYGKCGDAET 216
Query: 490 AERLIEAM 497
A + E M
Sbjct: 217 ARAVFERM 224
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/648 (38%), Positives = 372/648 (57%), Gaps = 44/648 (6%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F L+ Y + I AR LFD++ + DLV++ +I YA+CG +L LF+ MRE+
Sbjct: 66 FVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 125
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC---GFDHYASVNNSLLTCYSRNGFLDE 182
D + ++ A + L + + + Y F + +++ Y++ G ++
Sbjct: 126 GVVPDKVAMVTVVFACAK-LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 184
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M E K+ +SW++M+ AYG H +G +AL LF+ M+S + D TLAS+L A +
Sbjct: 185 AREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACS 243
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
L++L G H + K G + + + L+D+Y KC ++ D +F+++P+ DLV W
Sbjct: 244 DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR-EIEDARFLFDKMPERDLVTWT 302
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKI 362
MI GY++ ++++L F K+ G PD + V V+ AC+ L G A TI
Sbjct: 303 VMIGGYAECGN-ANESLVLFDKMREEGVVPDKVAMVTVVFACAKL----GAMHKARTIDD 357
Query: 363 EIRSNRISVN----NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + ++ A++ M++KCG +E AR +FDRM E N +S ++MIA Y HG G +
Sbjct: 358 YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 417
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF ML + I P IT VS+L AC+H G V EG ++FS+M + + + +HY+C++
Sbjct: 418 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVV 477
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAG+L +A +LIE+M +A KAA L+L+P N
Sbjct: 478 DLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPG 537
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
Y++L+NIYA +G+WE+VA R LM R ++K PG++WIEV + H F D +HP KE
Sbjct: 538 HYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKE 597
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ L+ + K++ GYVPD K L HSEKLA+AFGL++T PI
Sbjct: 598 IYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIR 657
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KNLR+CGDCH K +SAI GR I VRD RFH FK+G CSCGDYW
Sbjct: 658 IIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 174/352 (49%), Gaps = 25/352 (7%)
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
MV + + + + F+E++ D YTL ++ A L++L G H + K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+ + + L+D+Y KC ++ D +F+++ + DLV W MI GY++ + ++++L
Sbjct: 61 LDLDHFVCAALVDMYVKCR-EIEDARFLFDKMQERDLVTWTVMIGGYAECGK-ANESLVL 118
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
F+K+ G PD + V V+ AC+ L +I I+ + + + A++ MY+K
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG +E AR +FDRM E N +S ++MIA Y HG G +AL LF ML + + P IT S+
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC--MIDLLGRAGKLTDAERLIEAMPF 499
L AC+ + G+ + ++ F + +H+ C ++D+ G+ ++ DA L + MP
Sbjct: 239 LYACSDLKNLQMGRLIHHI---VYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP- 294
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
+ V + ++ YA G E + MR+ GV
Sbjct: 295 -----------------ERDLVTWTVMIGGYAECGNANESLVLFDKMREEGV 329
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 167/364 (45%), Gaps = 39/364 (10%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
L I +Y+KCGC+ +A F++ + NV S++ ++AAY
Sbjct: 168 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH----------------- 210
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHC 153
G AL LF+ M D TL+ L+ A S+ NL + + +H
Sbjct: 211 --------------GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHH 256
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
+ G D V +L+ Y + +++A+ +F +M E +D V+W M+ Y +
Sbjct: 257 IVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPE-RDLVTWTVMIGGYAECGNAN 315
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
E+L LF +M + D + +++ A L + ++ + F + +G+ +I
Sbjct: 316 ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 375
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
D++AKC G + ++F+ + + +++ W+ MI+ Y + +AL F + R G P+
Sbjct: 376 DMHAKC-GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ-GRKALDLFPMMLRSGILPN 433
Query: 334 DCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRL 391
+ V ++ ACS+ + + + + ++ E S R V + +V + + G L++A +L
Sbjct: 434 KITLVSLLYACSH-AGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKL 492
Query: 392 FDRM 395
+ M
Sbjct: 493 IESM 496
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 139/314 (44%), Gaps = 43/314 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C ++L G+ +H + K + ++ + +Y KC + A F++
Sbjct: 234 TLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM 293
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ ++ V++ YA + LFD++ + PD V+ T++ A A G A
Sbjct: 294 PERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 353
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
++ ++ K+F D + +++ +++
Sbjct: 354 TIDDYIQRKKFQLD---------------------------------VILGTAMIDMHAK 380
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ A+ +F M E K+ +SW++M+ AYG H +G +AL LF M+ + + TL S
Sbjct: 381 CGCVESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 439
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP 294
+L A + + GL+F + L+ + + + + ++DL + +G + + +K+ E +
Sbjct: 440 LLYACSHAGLVEEGLRFFS-LMWEDYSVRADVKHYTCVVDLLGR-AGRLDEALKLIESMT 497
Query: 295 -QPDLVLWNTMISG 307
+ D LW +
Sbjct: 498 VEKDEGLWGAFLGA 511
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 263/711 (36%), Positives = 388/711 (54%), Gaps = 73/711 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
++ ++L CV D+V K L + L P +L N + LY+K G LS A F++
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDK 83
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+VFS+N +L+AY++ + R +FDQ+ D VSYNT+I+ ++ G + AL F
Sbjct: 84 MSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFF 143
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+E+ F++ +T ++ A S L + KQ+H + V N+L Y++
Sbjct: 144 VRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKC 203
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LD+A+ +F M K+ VSWNSM+ Y Q+ + +LF EM S L D T+++I
Sbjct: 204 GALDQARWLFDRMVN-KNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNI 262
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L+A Y +C G + + K F EI + D
Sbjct: 263 LSA-----------------------------------YFQC-GYIDEACKTFREIKEKD 286
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIH 356
V W TM+ G +Q + D AL F+++ PD+ + V+S+C+ L S G+ +H
Sbjct: 287 KVCWTTMMVGCAQNGKEED-ALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVH 345
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ + + + V++ALV MYSKCG DA +F RM N +S NSMI GYAQ+G
Sbjct: 346 GKAVIFGVDHDLL-VSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKD 404
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+EAL L+E ML N+ P NITFV VLSAC H G V GQ YF + + G P +HYSC
Sbjct: 405 LEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSC 464
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSN 519
MI+LLGRAG + A LI++M F P + AA H +L+P N
Sbjct: 465 MINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHN 524
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
A PY+ML+NIYAA G+W++VA +R LM++ ++K +SWIE+ Q+H FVAED +H
Sbjct: 525 AGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSET 584
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE- 626
++I+ L + +K++++G+ PD K + +HSEKLA+AF L+ +G
Sbjct: 585 EQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRT 644
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI +MKN+R+CGDCH +KF+S I R I +RD RFH F +GRCSC D W
Sbjct: 645 PIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/626 (37%), Positives = 358/626 (57%), Gaps = 36/626 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +F QI +PD +YN +I + A+ LFK+M E D FT ++ S
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 144 NLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L + Q+H L + CGF + V N+L+ Y+ G ++ A+RVF EM E ++ +WNS
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE-RNVRTWNS 195
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M Y + E ++LF EM+ L + D TL S+LTA L DL G + ++ + G
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
N + + L+D+YAKC G + ++F+++ + D+V W+ MISGYSQ +AL
Sbjct: 256 LKGNPTLITSLVDMYAKC-GQVDTARRLFDQMDRRDVVAWSAMISGYSQASR-CREALDL 313
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F ++ + P++ + V ++S+C+ L GK +H K ++ +++ AL+ Y+
Sbjct: 314 FHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT-VTLGTALMDFYA 372
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG++E + +F +MP N +S +I G A +G G +AL F MLE N+ P ++TF+
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
VLSAC+H G V EG+ F M FG EP EHY CM+D+LGRAG + +A + I+ MP
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492
Query: 501 PGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P ++ + + + LEP+++ Y++L+NIYA+ G+WE+ +R
Sbjct: 493 PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVR 552
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--- 600
M+++G++K PG S IE+ +H F AED H +EI+N +E+M +++K AGYVP
Sbjct: 553 GEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTA 612
Query: 601 ---------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
DKE + HHSEKLA+AFGL+ + G I + KNLR+C DCHNA K +S +
Sbjct: 613 EARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVF 672
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI VRD RFH FK+G CSC DYW
Sbjct: 673 NREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 196/428 (45%), Gaps = 41/428 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ +HAL +K ++ N I +Y+ CG
Sbjct: 126 TFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCG------------ 173
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD++ + ++ ++N++ + Y G+ E + LF
Sbjct: 174 -------------------EVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M E D TL ++TA +L L + ++ G ++ SL+ Y++ G
Sbjct: 215 EMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG 274
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+R+F +M +D V+W++M+ Y Q EAL LF EM + + T+ SIL
Sbjct: 275 QVDTARRLFDQMDR-RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ L L G H + K +G+ L+D YAKC G + ++VF ++P ++
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKC-GSVESSIEVFGKMPVKNV 392
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
+ W +I G + + +AL F + P+D +F+ V+SACS+ G+ +
Sbjct: 393 LSWTVLIQGLASNGQ-GKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFV 451
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG-- 414
+ RI +V + + G +E+A + MP + N V +++A H
Sbjct: 452 SMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNV 511
Query: 415 -IGMEALR 421
IG E+L+
Sbjct: 512 EIGEESLK 519
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 144/305 (47%), Gaps = 16/305 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ YA+ ++ +AR+LFDQ+ + D+V+++ +IS Y+ AL LF +M++ D +
Sbjct: 266 LVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPN 325
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T+ ++++ + L K +H ++ +L+ Y++ G ++ + VF
Sbjct: 326 EITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFG 385
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+M +K+ +SW ++ + +G +AL+ F M+ + + T +L+A + +
Sbjct: 386 KM-PVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVD 444
Query: 249 GGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
G + + G ++D+ + +G + + + + +P QP+ V+W T+++
Sbjct: 445 EGRDLFVSMSRDFGIEPRIEHYGCMVDILGR-AGLIEEAFQFIKNMPIQPNAVIWRTLLA 503
Query: 307 G--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
+ E +++L L H D + SN+ S+G+ AL ++ E+
Sbjct: 504 SCKVHKNVEIGEESLKQLIILEPT--HSGDYILL------SNIYASVGRWEDALKVRGEM 555
Query: 365 RSNRI 369
+ I
Sbjct: 556 KEKGI 560
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+++ A +F ++ E ++ + N MI G+ EA+ LF+ M E ++ P TF +L
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
C+ ++EG++ +++ GF G + +I + G++ A R+
Sbjct: 133 VCSRLQALSEGEQIHALIMKC-GFGSHGFVKNTLIHMYANCGEVEVARRV---------- 181
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
F ++ N + + Y SG WEEV +
Sbjct: 182 --------FDEMSERNVRTWNSMFAGYTKSGNWEEVVKL 212
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/644 (39%), Positives = 373/644 (57%), Gaps = 41/644 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y + R+ SAR++FD++ + D++S+N++I+ Y G E LS+F M +
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T+ + A S + L + +HC + F N+LL YS+ G LD AK V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV 353
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F EM + VS+ SM+ Y REGL EA++LF+EM + D+YT+ ++L
Sbjct: 354 FREMSG-RSVVSYTSMIAGYA--REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARN 410
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G + H + ++ + + + L+D+YAKC G MR+ VF E+ D++ WNT+
Sbjct: 411 RLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKC-GSMREAELVFSEMRVKDIISWNTV 469
Query: 305 ISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
I GYS K Y+++AL F L + PD+ + CV+ AC++LS G++IH ++
Sbjct: 470 IGGYS-KNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S+R V N+LV MY+KCG L AR LFD + + VS MIAGY HG G EA+ L
Sbjct: 529 GYFSDR-HVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F M + I P I+FVS+L AC+H+G V EG ++F++M+ EP EHY+C++D+L
Sbjct: 588 FNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
R G L+ A R IE MP P + +A + A +LEP N YV+
Sbjct: 648 RTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVL 707
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
+ANIYA + KWEEV +R+ + RG++K PG SWIE+K ++++FVA D S+P ++I +
Sbjct: 708 MANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAF 767
Query: 586 LEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L + +M + GY P +KE+ L HSEKLA+A G++S+ +G+ I V KN
Sbjct: 768 LRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 827
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH KF+S + REI +RD+ RFH FKDG CSC +W
Sbjct: 828 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 224/426 (52%), Gaps = 18/426 (4%)
Query: 79 LRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
LR S R D I D + NT + + + G+ ++A+ L ++D D TL
Sbjct: 44 LRTVSDRA--DSITTFDRSVTDANTQLRRFCESGNLKNAVKLLH--VSGKWDIDPRTLCS 99
Query: 137 LIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
++ A S +L K++ GF +++ + L Y+ G L EA RVF ++ +I+
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV-KIE 158
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+ WN ++ + + ++ LF++M+S + +D YT + + +F+SL + GG Q H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLH 218
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+++KSGF + + +G+ L+ Y K + + KVF+E+ + D++ WN++I+GY
Sbjct: 219 GYILKSGFGERNSVGNSLVAFYLK-NHRVDSARKVFDEMTERDVISWNSIINGYVSN-GL 276
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEI-RSNRISVN 372
+++ L F ++ G D + V V + C++ SLG+ +H +K R +R
Sbjct: 277 AEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC-- 334
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ MYSKCG+L+ A+ +F M + VS SMIAGYA+ G+ EA++LFE M E I
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDM-FGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P T +VL+ CA + EG++ +K+ GF+ + ++D+ + G + +AE
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAE 452
Query: 492 RLIEAM 497
+ M
Sbjct: 453 LVFSEM 458
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 159/334 (47%), Gaps = 31/334 (9%)
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
VS + +D TL S+L + L G + + +GF +S++GS L +Y C GD
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNC-GD 144
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+++ +VF+++ + WN +++ ++ ++S ++G FKK+ G D +F CV
Sbjct: 145 LKEASRVFDQVKIEKALFWNILMNELAKSGDFSG-SIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+ S+L S + G+Q+H +K R SV N+LVA Y K ++ AR++FD M E + +
Sbjct: 204 SFSSLRSVNGGEQLHGYILKSGF-GERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVI 262
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S NS+I GY +G+ + L +F ML + I T VSV + CA + ++ G+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHC-- 320
Query: 462 KDMFG----FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEP 517
FG F E + ++D+ + G L A+ + F ++
Sbjct: 321 ---FGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV------------------FREMSG 359
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
+ V Y + YA G E + M + G+
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 46/316 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R L GK +H +N + F ++SN + +Y+KCG + A F++
Sbjct: 399 TVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEM 458
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ S+N ++ Y++ + YA+ ALSLF
Sbjct: 459 RVKDIISWNTVIGGYSK--------------------------NCYAN-----EALSLFN 487
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ EKRF D T++ ++ A ++ K ++H + G+ V NSL+ Y++
Sbjct: 488 LLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A+ +F ++ KD VSW M+ YG H G EA+ LF +M + D + S+
Sbjct: 548 GALLLARLLFDDITS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSL 606
Query: 238 LTAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L A + + G +F H I+ + I +D+ A+ +G++ + E
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI----VDMLAR-TGNLSKAYRFIEN 661
Query: 293 IP-QPDLVLWNTMISG 307
+P PD +W ++ G
Sbjct: 662 MPIPPDATIWGALLCG 677
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/647 (37%), Positives = 373/647 (57%), Gaps = 36/647 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N F L+ AY+ ++ AR++FD+I D+VS+ +I++YA+ AL F M
Sbjct: 79 SNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQM 138
Query: 123 REKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R F + FT +G++ A N K +HC + ++ V LL Y+R G
Sbjct: 139 RVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDN 198
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D+A R F +M + D + W+ M+ + Q + +AL++F +M + + +T +S+L A
Sbjct: 199 DDAWRAFGDMPK-NDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQA 257
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+E L H H +K+G + + + L+ YAKC G + M++FE + + V
Sbjct: 258 SADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC-GCIEQSMELFEALSDRNDVS 316
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WNT+I Y Q + ++AL F + R + ++ ++ AC+ L+ LG Q+H LT
Sbjct: 317 WNTIIVSYVQLGD-GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLT 375
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K I ++V NAL+ MY+KCG+++DAR +FD + + VS N++I GY+ HG+G+EA
Sbjct: 376 AKT-IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEA 434
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+++F M ET P +TFV VLSAC++TG++ EG++YF+ MK +G EP EHY+CM+
Sbjct: 435 IKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVW 494
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVP 522
L+GR+G L A + IE +PF P + +A A L+LEP +
Sbjct: 495 LMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEAS 554
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
+V+L+NIYA + +W VA +R+ M+ +GV+K+PG SWIE + +H F D SH +K I
Sbjct: 555 HVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLI 614
Query: 583 HNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ LE ++ K ++AGY P +KE+ L HSE+LA+AFGL+ G PI +
Sbjct: 615 NGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRI 674
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLRIC DCH+ IK IS I GR+I VRD RFH F++G CSC DYW
Sbjct: 675 IKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 218/415 (52%), Gaps = 10/415 (2%)
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNN 144
+FD++P+ + VS+ TLI YA A LF + + + + F + ++ S
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
L + +H + G+ + +L+ YS +G + A+ VF E+ KD VSW M+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISS-KDMVSWTGMIA 120
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+Y ++ EAL+ F +M + +T A +L A L++ G H ++K+ + +
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ ++G GL++LY +C GD D + F ++P+ D++ W+ MIS ++Q + S++AL F +
Sbjct: 181 DLYVGVGLLELYTRC-GDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ-SEKALEIFCQ 238
Query: 325 LNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ R P+ +F V+ A +++ S L K IH +K + S + V+NAL+A Y+KCG
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGL-STDVFVSNALMACYAKCG 297
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+E + LF+ + + N VS N++I Y Q G G AL LF ML + T +T+ S+L
Sbjct: 298 CIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357
Query: 444 ACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
ACA + G Q + K ++G + + +ID+ + G + DA + + +
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDARFMFDML 410
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA +VF N L+A YA+ I + +LF+ + + VS+NT+I +Y GD E
Sbjct: 273 HALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGER 332
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
ALSLF +M + T S ++ A + L L Q+HCL + +V N+L+
Sbjct: 333 ALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALID 392
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y++ G + +A R ++M +++D+VSWN+++ Y H G+EA+++F M + D
Sbjct: 393 MYAKCGSIKDA-RFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDEL 451
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T +L+A ++ L G Q+ + + G + ++ L + SG++ +K E
Sbjct: 452 TFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGR-SGNLDQAVKFIE 510
Query: 292 EIP-QPDLVLWNTMI 305
+IP +P +++W ++
Sbjct: 511 DIPFEPSVMIWRALL 525
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/730 (35%), Positives = 396/730 (54%), Gaps = 57/730 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F V+K C D LHAL K + N + +Y KCG + A F
Sbjct: 148 SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++F +N ++ Y++ A Q+F+++P+ D VS+NTLIS ++ G L++F
Sbjct: 208 ERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFV 267
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASV--NNSLLTCYSRNG 178
+M + F + T +++A ++ L H A +H + N L+ Y++ G
Sbjct: 268 EMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG 327
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD AKRVF + E D +SWNS++ G +AL LF +M + LD + L +IL
Sbjct: 328 CLDLAKRVFKSLRE-HDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC------------------- 279
+ + G H + IKSG ++ +G+ +I +YAKC
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446
Query: 280 -----------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
SGD+ F+ +P+ ++V WN+M+S Y Q +S++ L + +
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNG-FSEEGLKLYVSMRSN 505
Query: 329 GYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD +F I AC++L+ LG Q+ K + N +SV N++V MYS+CG +++
Sbjct: 506 GVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLN-VSVANSIVTMYSRCGLIKE 564
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A+ FD + + + +S N+M+A +AQ+G+G++ + FE ML+T P +I++VSVLS C+H
Sbjct: 565 AKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSH 624
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---- 503
G VAEG+ YF M +FG P EH+SCM+DLLGRAG L A+ LIE MPF P +
Sbjct: 625 MGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWS 684
Query: 504 -------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+A AA ++L+ + YV+L+N+Y+ SG+ + VA +R+LM+ +G
Sbjct: 685 ALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKG 744
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRL---- 606
++ G SWIEV ++HVF ++ SHP IKE++ LEEM + ++ G E +
Sbjct: 745 IRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVHRSK 804
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
+HSEKLA AFGLL+ PI VMKNLR+C DCH IK +S + RE+ +RD YRFH F
Sbjct: 805 KYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHF 864
Query: 667 KDGRCSCGDY 676
KDG CSC DY
Sbjct: 865 KDGICSCKDY 874
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 74/525 (14%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP--QPDLVSYN 100
+YS CG A F +T H N+F++N ++ A R++ A +LFD++P D VS+
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111
Query: 101 TLISAYADCGDTESALSLF----KDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCL 154
T+IS Y+ G + F +D + + D F+ + ++ A S + L QLH L
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM-------------------GEIK- 194
GF + NS++ Y + G +D A+ VF+++ G K
Sbjct: 172 VSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231
Query: 195 ----------DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
DEVSWN+++ + QH G++ L +F EM + + T S+L+A S
Sbjct: 232 LQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
DL G HA +++ + G+GLID+YAKC G + +VF+ + + D + WN++
Sbjct: 292 SDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC-GCLDLAKRVFKSLREHDHISWNSL 350
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIE 363
I+G + AL F ++ R D+ ++ CS S G+ +H TIK
Sbjct: 351 ITGVVHF-GLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409
Query: 364 IRSNRISVNNALVAMYSKCGNLE-------------------------------DARRLF 392
+ S+ V NA++ MY+KCG+ + AR F
Sbjct: 410 MGSSA-PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYF 468
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
D MPE N V+ NSM++ Y Q+G E L+L+ M + P ITF + + ACA V
Sbjct: 469 DMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVK 528
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + + FG + ++ + R G + +A+ +++
Sbjct: 529 LGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI 572
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 38/139 (27%)
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG------------------------ 383
SP + +++HA I + + + + N L+ MYS CG
Sbjct: 23 SPHIARKLHAQLI-LSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMI 81
Query: 384 -------NLEDARRLFDRMPEH--NTVSLNSMIAGYAQHGIGMEALRLFEWML-ETNIPP 433
+ DA +LFD MP ++VS +MI+GY+Q+G + F M+ +TN
Sbjct: 82 RALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGG 141
Query: 434 TN---ITFVSVLSACAHTG 449
N +F SV+ AC G
Sbjct: 142 KNYDPFSFTSVMKACGSLG 160
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/649 (37%), Positives = 375/649 (57%), Gaps = 36/649 (5%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
HA+ F L+ AY+ + + AR +FD I D+VS+ +++ YA+ E +L LF
Sbjct: 167 HHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFN 226
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + + FT+SG + + + K +H A+ +DH V +LL Y+++G
Sbjct: 227 QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSG 286
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+R+F EM + D + W+ M+ Y Q EAL LF M + + +T AS+L
Sbjct: 287 EIIDAQRLFEEMPK-TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVL 345
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A S L G Q H+ ++K G + N + + ++D+YAKC G++ + MK+FEE+P +
Sbjct: 346 QACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKC-GEIENSMKLFEELPDRND 404
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WNT+I GY Q + ++A+ F + P + ++ V+ A ++L+ G QIH+
Sbjct: 405 VTWNTIIVGYVQLGD-GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
LTIK + + V N+L+ MY+KCG + DAR FD+M + + VS N+MI GY+ HG+ M
Sbjct: 464 LTIKTMYNKDTV-VANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSM 522
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF+ M T+ P +TFV VLSAC++ G + +GQ +F M + +P EHY+CM
Sbjct: 523 EALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCM 582
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+ LLGR G+ +A +LI + + P + +A A H L++EP +
Sbjct: 583 VWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDD 642
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+N+YA +G+W+ VA +R+ M+ + V+K+PG SW+E + +H F D SHP IK
Sbjct: 643 ATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIK 702
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I LE +++K + AGYVPD KE+ L HSE+LA+A+GL+ T I
Sbjct: 703 LICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSI 762
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KNLRIC DCH +K IS + REI +RD RFH F+ G CSCGDYW
Sbjct: 763 RIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 242/447 (54%), Gaps = 10/447 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H + ++F+ N+LL Y + + A +LFD++PQ + +S+ TL Y+
Sbjct: 60 HILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQ 119
Query: 115 ALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
AL + ++ + + F + L+ S + L LH G A V +L+
Sbjct: 120 ALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALID 179
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS G +D A+ VF ++ KD VSW MV Y ++ E+LQLF +M + + +
Sbjct: 180 AYSVRGNVDVARHVFDDIC-CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T++ L + LE G H +K + + +G L++LYAK SG++ D ++FEE
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAK-SGEIIDAQRLFEE 297
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSL 351
+P+ DL+ W+ MI+ Y+Q + S +AL F ++ + P++ +F V+ AC S++S L
Sbjct: 298 MPKTDLIPWSLMIARYAQSDR-SKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDL 356
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIH+ +K + SN + V+NA++ +Y+KCG +E++ +LF+ +P+ N V+ N++I GY
Sbjct: 357 GKQIHSCVLKFGLNSN-VFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYV 415
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPE 470
Q G G A+ LF MLE ++ PT +T+ SVL A A + G + S+ +K M+ +
Sbjct: 416 QLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTV 475
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + G++ DA + M
Sbjct: 476 VA--NSLIDMYAKCGRINDARLTFDKM 500
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
P GK +H +K S + N L+ Y + +L+DA +LFD MP+ NT+S ++
Sbjct: 51 PIAGKHLHCHILK-RGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQ 109
Query: 409 GYAQHGIGMEA----LRLFEWMLETNIPPTNITFVSVL 442
GY++ +A LR+F+ E N P T + +L
Sbjct: 110 GYSRDHQFHQALHFILRIFKEGHEVN-PFVFTTLLKLL 146
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/710 (35%), Positives = 391/710 (55%), Gaps = 96/710 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C L GK +HA +K +A++ + +Y+KC C
Sbjct: 140 TWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC----------- 188
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLF 119
I A LF+ P + + V + +++ Y+ GD A+ F
Sbjct: 189 --------------------ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 120 KDMREKRFDTDGFTLSGLITA-SSNNLC-LIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+DMR + + + FT ++TA S + C Q+H + GF V ++L+ YS+
Sbjct: 229 RDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC 288
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A+R+ M E+ D VSWNSM+V + G EAL LF+ M + +D +T S+
Sbjct: 289 GDLSNARRMLETM-EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSV 347
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L F+ + D+ + H+ ++K+GF + + L+D+YAK G VFE++ D
Sbjct: 348 LNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAK-RGYFDYAFDVFEKMTDKD 406
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
++ W ++++G Y ++AL F ++ +G HPD V+SAC+ L+ GKQ+H
Sbjct: 407 VISWTSLVTGCVHNGSY-EEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVH 465
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A +K + S+ +SV+N+LV+MY+KCG +EDA ++FD M + ++ ++I GYAQ+G G
Sbjct: 466 ANFLKSGLGSS-LSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRG 524
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+ H G V G+ YF M++++G +P EHY+C
Sbjct: 525 RD----------------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYAC 556
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSN 519
MIDLLGR+GKL +A+ L+ M P G++ L +AAN+ +LEP N
Sbjct: 557 MIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKN 616
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
AVPYV+L+N+Y+A+GKWEE A RRLM+ RGV K+PG SWIE+ ++H F++ED SHP
Sbjct: 617 AVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRT 676
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI++ ++E+ +K+AGYVPD KE L +HSEKLAVAFGLL+ G P
Sbjct: 677 AEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAP 736
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLRICGDCH A+K++S + R + +RD+ FH F++G CSC DYW
Sbjct: 737 IRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 241/465 (51%), Gaps = 9/465 (1%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN + SKCG + A F+ + S+N ++ AYA R+ AR+LF + P
Sbjct: 44 SNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSC 103
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCL 154
+++++LIS Y G AL LF +M+ + + FT ++ S + L K Q+H
Sbjct: 104 ITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAH 163
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
AI FD A V L+ Y++ + EA+ +F + ++ V W +MV Y Q+ +G +
Sbjct: 164 AIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A++ F++M + + +T SILTA S+ G Q H +++SGF N +GS L+D
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVD 283
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y+KC GD+ + ++ E + D V WN+MI G ++ ++AL F+ ++ D+
Sbjct: 284 MYSKC-GDLSNARRMLETMEVDDPVSWNSMIVG-CVRQGLGEEALSLFRIMHLRHMKIDE 341
Query: 335 CSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
++ V++ S + +H+L +K + ++ VNNALV MY+K G + A +F+
Sbjct: 342 FTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKL-VNNALVDMYAKRGYFDYAFDVFE 400
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+M + + +S S++ G +G EALRLF M I P I +VLSACA +
Sbjct: 401 KMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEF 460
Query: 454 G-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G Q + + +K G + + ++ + + G + DA ++ ++M
Sbjct: 461 GKQVHANFLKSGLGSSLSVD--NSLVSMYAKCGCIEDANKVFDSM 503
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 188/373 (50%), Gaps = 38/373 (10%)
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY----------- 206
CG H +S +N +L+ S+ G +D+A+++F M + +DE SWN+M+ AY
Sbjct: 35 CGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPD-RDECSWNTMIGAYANSGRLNEARK 93
Query: 207 ------------------GQHREG--LEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
G R G +EAL+LF EM + +T S+L +
Sbjct: 94 LFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVL 153
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
L G Q HAH IK+ F N+ + +GL+D+YAKC + + +FE P + + VLW M+
Sbjct: 154 LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC-ILEAEYLFELAPDKRNHVLWTAMV 212
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+GYSQ + +A+ CF+ + G + +F +++AC ++S G Q+H ++
Sbjct: 213 TGYSQNGD-GHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGF 271
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+N + V +ALV MYSKCG+L +ARR+ + M + VS NSMI G + G+G EAL LF
Sbjct: 272 GAN-VFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFR 330
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M ++ T+ SVL+ + + S++ GFE + ++D+ +
Sbjct: 331 IMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKT-GFEAYKLVNNALVDMYAKR 389
Query: 485 GKLTDAERLIEAM 497
G A + E M
Sbjct: 390 GYFDYAFDVFEKM 402
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 49/214 (22%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM----------------------- 406
S +N +++ SKCG ++DAR+LFD MP+ + S N+M
Sbjct: 42 SDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIR 101
Query: 407 --------IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
I+GY ++G +EAL LF M P T+ SVL C+ + +G++
Sbjct: 102 SCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIH 161
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+ F+ + ++D+ + + +AE L E P +
Sbjct: 162 AHAIKT-QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP-----------------DKR 203
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
N V + + Y+ +G + R MR G++
Sbjct: 204 NHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIE 237
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/624 (39%), Positives = 357/624 (57%), Gaps = 35/624 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR +F+QIP P + N++I Y + A+ ++ M + D D FT L S
Sbjct: 93 ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK-SCG 151
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
LC KQLHC + GF A + N+L+ YS G L A++VF +M K VSW +M+
Sbjct: 152 VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN-KSVVSWATMI 210
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
AY Q EA++LF+ M + + TL ++LTA DL Q H ++ ++G
Sbjct: 211 GAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIG 270
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
++ + S L+D+Y KC G +F ++P+ +L WN MI+G+ + +Y ++AL F
Sbjct: 271 FHTVLTSALMDVYCKC-GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDY-EEALSLFN 328
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
++ G D + ++ AC++L LGK +H K +I + +++ ALV MY+KC
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD-VALGTALVDMYAKC 387
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G++E A R+F MPE + ++ ++I G A G G++AL LF M + + P ITFV VL
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
+AC+H G V EG YF+ M + +G +P EHY CM+D+LGRAG++ +AE LI+ MP P
Sbjct: 448 AACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPD 507
Query: 503 -----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+A +AA ++L+P N YV+L+NIY++ WE +R L
Sbjct: 508 YFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 567
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---- 601
M +R ++K PG S IEV +H FV D SHP EI+ L++M R++K AGYVPD
Sbjct: 568 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEV 627
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
KE L HSEKLA+AFGLLST+ G PI V+KNLR+C DCH+A+KFIS + R
Sbjct: 628 LFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNR 687
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
EI VRD RFH F G CSC D+W
Sbjct: 688 EIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 6/248 (2%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYA-KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HA ++++ + S ++ A SG + VF +IP P N++I GY+
Sbjct: 58 QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRIS 370
K QA+ ++ + G PD +F + +C L GKQ+H + K+ S+
Sbjct: 118 K-NLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE--GKQLHCHSTKLGFASDAY- 173
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ N L+ MYS CG L AR++FD+M + VS +MI YAQ + EA++LF M +
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P IT V+VL+ACA + + E K D G S ++D+ + G A
Sbjct: 234 VKPNEITLVNVLTACARSRDL-ETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLA 292
Query: 491 ERLIEAMP 498
L MP
Sbjct: 293 RDLFNKMP 300
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C RDL T K +H + + F L++ + +Y KCGC A FN+
Sbjct: 240 TLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKM 299
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+F +N+ +I+ + + D E ALSLF
Sbjct: 300 PEKNLFCWNI-------------------------------MINGHVEDSDYEEALSLFN 328
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D T++ L+ A ++ L L K LH + ++ +L+ Y++ G
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 388
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A RVF EM E KD ++W +++V +GL+AL+LF EM ++ D T +L
Sbjct: 389 SIESAMRVFQEMPE-KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447
Query: 239 TA 240
A
Sbjct: 448 AA 449
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 326 NRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCG 383
+++ HP C++S + S KQIHA ++ + + S + A A++ G
Sbjct: 36 SQIQLHP------CLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDS-G 88
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+L AR +F+++P T + NS+I GY + +A+ ++ M+ + P TF S+
Sbjct: 89 SLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK 148
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM------ 497
+C G + EG K GF + + ++++ G L A ++ + M
Sbjct: 149 SC---GVLCEG-KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 204
Query: 498 -------PFNPGSIALKAANHFLQLEPSNAVP-YVMLANIYAASGKWEEVATIRRLMR-- 547
+ + +A F ++E ++ P + L N+ A + ++ T +++ +
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264
Query: 548 -DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
+ G+ GF + M V+ + G +P+ +++ N + E
Sbjct: 265 DETGI----GFHTVLTSALMDVY-CKCGCYPLARDLFNKMPE 301
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 31/143 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK LH K + L + +Y+KCG
Sbjct: 341 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG------------ 388
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I SA ++F ++P+ D++++ LI A CG AL LF
Sbjct: 389 -------------------SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFH 429
Query: 121 DMREKRFDTDGFTLSGLITASSN 143
+M+ D T G++ A S+
Sbjct: 430 EMQMSEVKPDAITFVGVLAACSH 452
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 373/642 (58%), Gaps = 39/642 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + + ++FD++ ++VS+ +L++ Y G E AL LF M+ + +
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192
Query: 131 GFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT + ++ + + + K Q+H + I G D V NS++ YS++ + +AK VF
Sbjct: 193 PFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M E ++ VSWNSM+ + + LEA +LF M + L A+++ +++++
Sbjct: 253 SM-ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMS 311
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPDLVLWNTMISG 307
Q H +IK+G + +I + L+ Y+KCS ++ D K+F + ++V W +ISG
Sbjct: 312 FAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS-EIDDAFKLFCMMHGVQNVVSWTAIISG 370
Query: 308 YSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEI 364
Y Q +D+A+ F ++ R G P++ +F V++AC+ + S+ GKQ H+ +IK
Sbjct: 371 YVQNGR-TDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF 429
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
SN + V++ALV MY+K GN+E A +F R + + VS NSMI+GYAQHG G ++L++FE
Sbjct: 430 -SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 488
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M N+ ITF+ V+SAC H G V EGQ+YF +M + P EHYSCM+DL RA
Sbjct: 489 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRA 548
Query: 485 GKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLA 527
G L A LI MPF G+ + AA + L+P ++ YV+L+
Sbjct: 549 GMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLS 608
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYA +G W+E A +R+LM + V+K+ G+SWIEVK + F+A D SHP I+ LE
Sbjct: 609 NIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLE 668
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
E+S ++K AGY PD KE L HSE+LA+AFGL++T G PI ++KNLR
Sbjct: 669 ELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLR 728
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH IK IS I GR+I VRD+ RFH FK G CSCGDYW
Sbjct: 729 VCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 199/385 (51%), Gaps = 16/385 (4%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
++QLFD+ PQ L N L+ ++ + AL+LF +R TDG +LS ++
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG- 103
Query: 144 NLCLI-----KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
CL KQ+HC I CGF SV SL+ Y + +++ +RVF EM +K+ VS
Sbjct: 104 --CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVS 160
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
W S++ Y Q+ +AL+LF +M + + +T A++L + + G+Q H +I
Sbjct: 161 WTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVI 220
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
KSG +G+ ++++Y+K S + D VF+ + + V WN+MI+G+ +A
Sbjct: 221 KSGLDSTIFVGNSMVNMYSK-SLMVSDAKAVFDSMENRNAVSWNSMIAGFV-TNGLDLEA 278
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
F ++ G F VI C+N+ S KQ+H IK +++ AL+
Sbjct: 279 FELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK-NGSDFDLNIKTALMV 337
Query: 378 MYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LETNIPPTN 435
YSKC ++DA +LF M N VS ++I+GY Q+G A+ LF M E + P
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNE 397
Query: 436 ITFVSVLSACAH-TGKVAEGQKYFS 459
TF SVL+ACA T V +G+++ S
Sbjct: 398 FTFSSVLNACAAPTASVEQGKQFHS 422
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 177/344 (51%), Gaps = 17/344 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ +F N ++ Y++ L ++ A+ +FD + + VS+N++I+ + G A LF M
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285
Query: 123 REKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
R +G L+ I A+ LC KQLHC I G D ++ +L+ YS
Sbjct: 286 R-----LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYS 340
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTL 234
+ +D+A ++F M +++ VSW +++ Y Q+ A+ LF +M + + + +T
Sbjct: 341 KCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTF 400
Query: 235 ASILTAFTS-LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+S+L A + + G QFH+ IKSGF + S L+ +YAK G++ +VF+
Sbjct: 401 SSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK-RGNIESANEVFKRQ 459
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLG 352
DLV WN+MISGY+Q ++L F+++ D +F+ VISAC++ + G
Sbjct: 460 VDRDLVSWNSMISGYAQ-HGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG 518
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
++ L +K + + +V +YS+ G LE A L ++MP
Sbjct: 519 QRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 562
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
++F+E PQ L N ++ +S+ ++ + +AL F L R G D S CV+ C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQ-NKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105
Query: 348 SPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ GKQ+H IK + +SV +LV MY K ++ED R+FD M N VS S+
Sbjct: 106 FDRIVGKQVHCQCIKCGFVED-VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+AGY Q+G+ +AL+LF M I P TF +VL A G V +G + +M+ G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS-G 223
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + M+++ ++ ++DA+ + ++M
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ L+ YA++ I SA ++F + DLVS+N++IS YA G + +L +F++MR K +
Sbjct: 437 SALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLE 496
Query: 129 TDGFTLSGLITASSNN----------LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DG T G+I+A ++ ++K H I +HY+ ++ YSR G
Sbjct: 497 LDGITFIGVISACTHAGLVNEGQRYFDLMVKDYH---IVPTMEHYS----CMVDLYSRAG 549
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
L++A + +M W +++ A H ++++SLQ
Sbjct: 550 MLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQ 597
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/663 (37%), Positives = 373/663 (56%), Gaps = 52/663 (7%)
Query: 48 GCLSAAHHAFNQT--QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
GC + H F +VF N LL AY + +A+AR++F ++ D V+YN ++
Sbjct: 365 GCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMG 424
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS 165
+ G AL LF MR + L + S + ++
Sbjct: 425 CSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVF-------------- 470
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
VNNSLL YS+ LD+ +R+F EM E +D VS+N ++ AY ++ L+LF+EM L
Sbjct: 471 VNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 529
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ A++L+ SL D+ G Q HA L+ G +G+ LID+Y+KC M D
Sbjct: 530 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG--MLD 587
Query: 286 CMKV-FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
K F + + W +I+GY Q ++ ++AL F + R G PD +F +I A
Sbjct: 588 AAKSNFSNRSEKSAISWTALITGYVQNGQH-EEALQLFSDMRRAGLRPDRATFSSIIKAS 646
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S+L+ LG+Q+H+ I+ +S+ S + LV MY+KCG L++A R FD MPE N++S
Sbjct: 647 SSLAMIGLGRQLHSYLIRSGYKSSVFS-GSVLVDMYAKCGCLDEALRTFDEMPERNSISW 705
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N++I+ YA +G A+++FE ML P ++TF+SVL+AC+H G E KYF +MK
Sbjct: 706 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 765
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------AL 506
+ P EHY+C+ID LGR G + ++++ MPF I A
Sbjct: 766 QYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELAR 825
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA+ +EP++A PYV+L+NIYA +G+WE+ A ++++MRDRGV+K+ G+SW+E+K+++
Sbjct: 826 VAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKI 885
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
+ F + D + PMI EI + L+ + ++M + GY PD K + L +HSE+LA
Sbjct: 886 YSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLA 945
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AF L++T G PI +MKNL C DCH IK IS I R+I VRD+ RFH FKDG CSCG
Sbjct: 946 IAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCG 1005
Query: 675 DYW 677
DYW
Sbjct: 1006 DYW 1008
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 234/456 (51%), Gaps = 33/456 (7%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L A F+Q H N+FS N++L+AY+ + +A+ LF P + ++ ++ A+A
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G T ALSLF+ M + D T++ ++ C + LH AI G D + V
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG---CTVPSLHPFAIKFGLDTHVFVC 387
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSL 225
N+LL Y ++G L A+RVF EM + KD V++N+M++ G +EGL +ALQLF M
Sbjct: 388 NTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMM--GCSKEGLHTQALQLFAAM--R 442
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDM 283
+ G + L LQ+ +S N + + L+D Y+KC DM
Sbjct: 443 RAGYSRHPLHL--------------LQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDM 488
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
R ++F+E+P+ D V +N +I+ Y+ + + L F+++ ++G+ + ++S
Sbjct: 489 R---RLFDEMPERDNVSYNVIIAAYAWN-QCAATVLRLFREMQKLGFDRQVLPYATMLSV 544
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+L +GKQIHA + + + S + + NAL+ MYSKCG L+ A+ F E + +S
Sbjct: 545 AGSLPDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 603
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
++I GY Q+G EAL+LF M + P TF S++ A + + G++ S +
Sbjct: 604 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 663
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G++ S ++D+ + G L +A R + MP
Sbjct: 664 RS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 698
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 42/210 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K + G+ LH+ +++ S + + + +Y+KCGCL A F++
Sbjct: 638 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 697
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S+N ++ SAYA G+ ++A+ +F+
Sbjct: 698 PERNSISWNAVI-------------------------------SAYAHYGEAKNAIKMFE 726
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL---IKQLHCL----AIYCGFDHYASVNNSLLTC 173
M F+ D T ++ A S+N +K H + +I +HYA V ++L
Sbjct: 727 GMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL--- 783
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
R G + +++ EM D + W S++
Sbjct: 784 -GRVGCFSQVQKMLVEMPFKADPIIWTSIL 812
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 270/708 (38%), Positives = 394/708 (55%), Gaps = 72/708 (10%)
Query: 6 LKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L++C DL G+ LHA L L S +L+NH I +YS C
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCA---------------- 67
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ SA +LFD +P+P+LVS+ TL+S AL+ F M
Sbjct: 68 ---------------DVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCR 112
Query: 125 KRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
F LS A++ QLHC+ + GFD V ++L YS++G L E
Sbjct: 113 AGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVE 172
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASILTAF 241
A RVF +M + KD V+W +M+ Y ++ A+ F++M L G D + L S+L+A
Sbjct: 173 ACRVFDQMPQ-KDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSAS 231
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL--V 299
L+D H+ ++KSGF Q + + L D+YAK + DM + +V + I Q L V
Sbjct: 232 GGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAK-AADMDNAARVVK-IDQGSLNVV 289
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
++I GY + + ++AL F +L R G P++ +F +I C+ + G Q+HA
Sbjct: 290 SATSLIDGYIETD-CIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAE 348
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK + S+ V++ L+ MY KCG + + +LF + H ++ N+ I AQHG G E
Sbjct: 349 VIKTSLISDSF-VSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGRE 407
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A+R F+ M + I P +ITFVS+L+AC+H G V EG KYF MKD G EP+GEHYSC+I
Sbjct: 408 AIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCII 467
Query: 479 DLLGRAGKLTDAERLIEAMPFNP---------GSIALK--------AANHFLQLEPSNAV 521
D+ GRAG+L +AE+ I MP P G+ ++ AA++ ++LEP N
Sbjct: 468 DMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTG 527
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V L+ IYA+ G+WE+V +R+LMRD ++K PGFSW++ K+ HVF +ED SHP ++
Sbjct: 528 VHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEK 587
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ LEE+ ++K+ GYVPD K++ L +HSE++AVAF L+S +PI+
Sbjct: 588 IYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPII 647
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH+A+KFIS + R+I VRD RFH F G CSCGDYW
Sbjct: 648 VKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C + L G LHA +K + +++S+ + +Y KCG +S + F +
Sbjct: 325 TFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEI 384
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
++ ++N + A+ A + FD++ +P+ +++ +L++A + G + L
Sbjct: 385 EYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGL 444
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+ D G G +HY+ + + Y R
Sbjct: 445 KYFYSMK----DHHGIEPKG------------------------EHYSCI----IDMYGR 472
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G LDEA++ EM + W S++ A
Sbjct: 473 AGRLDEAEKFIGEMPVKPNAYGWCSLLGA 501
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/643 (40%), Positives = 362/643 (56%), Gaps = 41/643 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y + + SA +LFD++ D+VS+N++IS G + SAL F M R
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D TL + A +N +L L + LH + F NN+LL YS+ G L++A +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F +MG+ K VSW S++ AY REGL +A++LF EM S + D+Y++ S+L A
Sbjct: 712 FEKMGQ-KTVVSWTSLIAAY--VREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACG 768
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G H ++ K+ + + L+D+YAKC G M + VF +IP D+V WNTM
Sbjct: 769 NSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKC-GSMEEAYLVFSQIPVKDIVSWNTM 827
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I GYS K ++AL F ++ + PD + C++ AC +L+ +G+ IH ++
Sbjct: 828 IGGYS-KNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILR-N 884
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S+ + V NAL+ MY KCG+L AR LFD +PE + ++ MI+G HG+G EA+ F
Sbjct: 885 GYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATF 944
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ M I P ITF S+L AC+H+G + EG +F+ M EP+ EHY+CM+DLL R
Sbjct: 945 QKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLAR 1004
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
G L+ A LIE MP P + +A K A H +LEP NA YV+L
Sbjct: 1005 TGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLL 1064
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
ANIYA + KWEEV +R + RG++K PG SWIEV+ + FV+ D +HP K I + L
Sbjct: 1065 ANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLL 1124
Query: 587 EEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
+ KMK G+ P +KE L HSEKLA+AFG+L+ G I V KNL
Sbjct: 1125 NNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNL 1184
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+C DCH KF+S REI +RD+ RFH FKDG CSC D+W
Sbjct: 1185 RVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 221/466 (47%), Gaps = 28/466 (6%)
Query: 44 YSKCGCLSAAHHAFNQTQHANVFSF------NVLLAAYARQLRIASARQLFDQIPQPDLV 97
YS C C ++ N + N F F L++Y R ++ F ++ +
Sbjct: 369 YSTCNCHTSEA---NYAKPRNCFIFFQQPSRKYFLSSYLDVPRSSTRVGAFAKLDE---- 421
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLA 155
NT I + + GD +A+ L + ++ D + + S ++ + + CL K +H +
Sbjct: 422 --NTKICKFCEVGDLRNAVELLRMSQKSELDLNAY--SSILQLCAEHKCLQEGKMVHSVI 477
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
G + L+ Y G L E +R+F + WN M+ Y + + E+
Sbjct: 478 SSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRES 537
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+ LF++M L + + YT + IL F +L + + H + K GF + + + LI
Sbjct: 538 IYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIAT 597
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y K SG++ K+F+E+ D+V WN+MISG +S AL F ++ + D
Sbjct: 598 YFK-SGEVDSAHKLFDELGDRDVVSWNSMISGCVMN-GFSHSALEFFVQMLILRVGVDLA 655
Query: 336 SFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ V ++AC+N+ S SLG+ +H +K S + NN L+ MYSKCGNL DA + F++
Sbjct: 656 TLVNSVAACANVGSLSLGRALHGQGVK-ACFSREVMFNNTLLDMYSKCGNLNDAIQAFEK 714
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
M + VS S+IA Y + G+ +A+RLF M + P + SVL ACA + +G
Sbjct: 715 MGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG 774
Query: 455 QKYFSMMK--DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++ +M P + ++D+ + G + +A + +P
Sbjct: 775 RDVHNYIRKNNMALCLPVS---NALMDMYAKCGSMEEAYLVFSQIP 817
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 38/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C L G+ +H KN + +SN + +Y+KCG + A+ F+Q
Sbjct: 757 SMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQI 816
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N ++ Y++ + +P AL LF
Sbjct: 817 PVKDIVSWNTMIGGYSK-----------NSLPN--------------------EALKLFA 845
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M +K DG T++ L+ A S L + + +H + G+ V N+L+ Y + G
Sbjct: 846 EM-QKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCG 904
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A R+ ++M KD ++W M+ G H G EA+ FQ+M + D T SIL
Sbjct: 905 SLVHA-RLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSIL 963
Query: 239 TAFTSLEDLVGGLQFHAHLI-KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + L G F +I + + ++DL A+ +G++ + E +P +P
Sbjct: 964 YACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLAR-TGNLSKAYNLIETMPIKP 1022
Query: 297 DLVLWNTMISG 307
D +W ++ G
Sbjct: 1023 DATIWGALLCG 1033
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/708 (34%), Positives = 394/708 (55%), Gaps = 66/708 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+++ + + C + L G+ H + + +L N + +Y KCG L
Sbjct: 12 SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSL---------- 61
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A AR++FD++ + +LVS+NT+ISAYA+ G + +F
Sbjct: 62 ---------------------ADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFS 100
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M E +G T G + + N L + KQ+H AI G ASVN ++ Y + G
Sbjct: 101 NMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCG 160
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+L+ A+ VF +M E K+ V+W ++V Y Q ++AL LF +MV+ + LD Y + +L
Sbjct: 161 WLEGAELVFEKMSE-KNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVL 219
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A LE+L G Q H H++K G +G+ L+D Y KCS ++ K FE I +P+
Sbjct: 220 KACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCS-NLESATKAFEWISEPND 278
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W+ +I+GY Q E+ ++AL F+ L + ++ + ACS L+ + G Q HA
Sbjct: 279 VSWSALITGYCQMGEF-EEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHA 337
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK + + + +A++ MYS+CG L+ A R+F+ + + + V+ ++IAGYA G
Sbjct: 338 DAIKSSLVAYQHG-ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAP 396
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+LF M + + P +TF++VL+AC+H+G V EG++Y M +G +HY CM
Sbjct: 397 EALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCM 456
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
+D+ RAG L +A LI +MPF+P +++ K AA + QL+P +
Sbjct: 457 VDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDT 516
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y+++ N+YA+ GKW+E A +R++M +R ++K+ SWI VK ++H F+ D HP +
Sbjct: 517 AGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTE 576
Query: 581 EIHNYLEEMSRKMKQ-----------AGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI++ LE ++ + + + +P+++++L+ HSE+LA+AFGL+ST P++
Sbjct: 577 EIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVV 636
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLR C DCH+ K +S I GREI VRD++RFH FK G CSC DYW
Sbjct: 637 VFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 265/774 (34%), Positives = 417/774 (53%), Gaps = 118/774 (15%)
Query: 12 RRDLVTGKSLHALYLKNLVPFS----AYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFS 67
R L +++H N++ F A++ N I +Y K L A F++ + +
Sbjct: 27 RTSLQLARAVHG----NIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIA 82
Query: 68 FNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+++ Y IA AR +F++ P D V YN +I+ ++ D SA++LF M+ +
Sbjct: 83 RTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 126 RFDTDGFT----LSGL-ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---- 176
F D FT L+GL + C+ Q H A+ G + SV+N+L++ YSR
Sbjct: 143 GFKPDDFTYASVLAGLALVVDDEKQCV--QFHAAALKSGAGYVTSVSNALVSVYSRCASS 200
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAY------------------------------ 206
L A++VF ++ E KDE SW +M+ Y
Sbjct: 201 PSLLHSARKVFDDIPE-KDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMIS 259
Query: 207 GQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
G GL EAL++ + MVS + LD +T S++ A + L G Q HA++++
Sbjct: 260 GYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DF 318
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY--------------SQ 310
+ H + L+ LY KC G + +FE++P DLV WN ++SGY
Sbjct: 319 SFHFDNSLVTLYYKC-GKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 311 KEE----------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GK 353
KE+ + ++ L F + R G+ P D +F I +C+ L G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q HA +KI S+ +S NAL+ MY+KCG +E+A+++F MP ++VS N++IA QH
Sbjct: 438 QFHAQLVKIGFDSS-LSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQH 496
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G+EA+ ++E ML+ I P ITF++VL+AC+H G V +G+KYF+ M+ ++ P +H
Sbjct: 497 GHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH 556
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y+ +IDLL R+GK ++AE +IE++PF P + + + AA+ L
Sbjct: 557 YARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + Y++L+N+YAA+G+WEEVA +R+LMRDRGV+K+ SWIE++ Q+H F+ +D SH
Sbjct: 617 PEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTS 623
P + ++ YL+++ ++M++ GYVPD KE L HSEK+AVAFGL+
Sbjct: 677 PEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KNLR CGDCHN +F+S + R+I +RD RFH F++G CSCG++W
Sbjct: 737 PGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 159/322 (49%), Gaps = 29/322 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V++ C R L GK +HA L+ FS + N + LY KCG + A F +
Sbjct: 288 TYPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLVTLYYKCGKFNEARAIFEKM 346
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N LL+ Y I A+ +F ++ + +++S+ +IS A+ G E L LF
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + F+ + SG I + + C +Q H + GFD S N+L+T Y++ G
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCG 466
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA++VF M + D VSWN+++ A GQH G+EA+ +++EM+ + D T ++L
Sbjct: 467 VVEEAQQVFRTMPCL-DSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVL 525
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG------FHQNSHIGSG------LIDLYAKCSGDMRDC 286
TA + HA L+ G I G LIDL + SG +
Sbjct: 526 TACS-----------HAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCR-SGKFSEA 573
Query: 287 MKVFEEIP-QPDLVLWNTMISG 307
+ E +P +P +W ++SG
Sbjct: 574 ESIIESLPFKPTAEIWEALLSG 595
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/632 (37%), Positives = 380/632 (60%), Gaps = 40/632 (6%)
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
A A ++FD++P+ +LV++ +I+ +A G A+ LF DM + D FT S +++A
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
Query: 142 S--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKDE 196
+ L L KQLH I G V SL+ Y++ +G +D++++VF +M E +
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNV 120
Query: 197 VSWNSMVVAYGQHRE-GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+SW +++ AY Q E EA++LF +M+S + + ++ +S+L A +L D G Q ++
Sbjct: 121 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 180
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
+ +K G + +G+ LI +YA+ SG M D K F+ + + +LV +N ++ GY+ K S
Sbjct: 181 YAVKLGIASVNCVGNSLISMYAR-SGRMEDARKAFDILFEKNLVSYNAIVDGYA-KNLKS 238
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
++A F ++ G +F ++S +++ G+QIH +K +SN+ + NA
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ-CICNA 297
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++MYS+CGN+E A ++F+ M + N +S SMI G+A+HG AL +F MLET P
Sbjct: 298 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 357
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
IT+V+VLSAC+H G ++EGQK+F+ M G P EHY+CM+DLLGR+G L +A I
Sbjct: 358 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 417
Query: 495 EAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+MP ++ + AA L+ EP + Y++L+N++A++G+W+
Sbjct: 418 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWK 477
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V IR+ M++R + K+ G SWIEV+ ++H F + SHP +I+ L++++ K+K+ G
Sbjct: 478 DVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 537
Query: 598 YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
Y+PD KE+ L HSEK+AVAFGL+STS +PI + KNLR+CGDCH AIK
Sbjct: 538 YIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIK 597
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+IS GREI VRD+ RFH K+G CSC DYW
Sbjct: 598 YISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 150/305 (49%), Gaps = 12/305 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YAR R+ AR+ FD + + +LVSYN ++ YA +E A LF ++ +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + L++ +++ + K Q+H + G+ + N+L++ YSR G ++ A +V
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E ++ +SW SM+ + +H AL++F +M+ + T ++L+A + +
Sbjct: 315 FNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 373
Query: 247 LVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
+ G + F++ + G + ++DL + SG + + M+ +P D ++W T+
Sbjct: 374 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR-SGLLVEAMEFINSMPLMADALVWRTL 432
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
+ + + LG + PDD + ++ SNL S G+ + I+ +
Sbjct: 433 LGAC---RVHGNTELGRHAAEMILEQEPDDPAAYILL---SNLHASAGQWKDVVKIRKSM 486
Query: 365 RSNRI 369
+ +
Sbjct: 487 KERNL 491
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/632 (37%), Positives = 380/632 (60%), Gaps = 40/632 (6%)
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
A A ++FD++P+ +LV++ +I+ +A G A+ LF DM + D FT S +++A
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
Query: 142 S--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKDE 196
+ L L KQLH I G V SL+ Y++ +G +D++++VF +M E +
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNV 125
Query: 197 VSWNSMVVAYGQHRE-GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+SW +++ AY Q E EA++LF +M+S + + ++ +S+L A +L D G Q ++
Sbjct: 126 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 185
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
+ +K G + +G+ LI +YA+ SG M D K F+ + + +LV +N ++ GY+ K S
Sbjct: 186 YAVKLGIASVNCVGNSLISMYAR-SGRMEDARKAFDILFEKNLVSYNAIVDGYA-KNLKS 243
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
++A F ++ G +F ++S +++ G+QIH +K +SN+ + NA
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ-CICNA 302
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++MYS+CGN+E A ++F+ M + N +S SMI G+A+HG AL +F MLET P
Sbjct: 303 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 362
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
IT+V+VLSAC+H G ++EGQK+F+ M G P EHY+CM+DLLGR+G L +A I
Sbjct: 363 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 422
Query: 495 EAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+MP ++ + AA L+ EP + Y++L+N++A++G+W+
Sbjct: 423 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWK 482
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V IR+ M++R + K+ G SWIEV+ ++H F + SHP +I+ L++++ K+K+ G
Sbjct: 483 DVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 542
Query: 598 YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
Y+PD KE+ L HSEK+AVAFGL+STS +PI + KNLR+CGDCH AIK
Sbjct: 543 YIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIK 602
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+IS GREI VRD+ RFH K+G CSC DYW
Sbjct: 603 YISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 150/305 (49%), Gaps = 12/305 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YAR R+ AR+ FD + + +LVSYN ++ YA +E A LF ++ +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + L++ +++ + K Q+H + G+ + N+L++ YSR G ++ A +V
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E ++ +SW SM+ + +H AL++F +M+ + T ++L+A + +
Sbjct: 320 FNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 378
Query: 247 LVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
+ G + F++ + G + ++DL + SG + + M+ +P D ++W T+
Sbjct: 379 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR-SGLLVEAMEFINSMPLMADALVWRTL 437
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
+ + + LG + PDD + ++ SNL S G+ + I+ +
Sbjct: 438 LGAC---RVHGNTELGRHAAEMILEQEPDDPAAYILL---SNLHASAGQWKDVVKIRKSM 491
Query: 365 RSNRI 369
+ +
Sbjct: 492 KERNL 496
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/633 (37%), Positives = 381/633 (60%), Gaps = 40/633 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ SA ++FD++P+ +LV++ +I+ +A G A+ LF DM + D FT S +++A
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 141 SS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKD 195
+ L L KQLH I G V SL+ Y++ +G +D++++VF +M E +
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HN 299
Query: 196 EVSWNSMVVAYGQHRE-GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+SW +++ AY Q E EA++LF +M+S + + ++ +S+L A +L D G Q +
Sbjct: 300 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
++ +K G + +G+ LI +YA+ SG M D K F+ + + +LV +N ++ GY+ K
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYAR-SGRMEDARKAFDILFEKNLVSYNAIVDGYA-KNLK 417
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
S++A F ++ G +F ++S +++ G+QIH +K +SN+ + N
Sbjct: 418 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ-CICN 476
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL++MYS+CGN+E A ++F+ M + N +S SMI G+A+HG AL +F MLET P
Sbjct: 477 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 536
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
IT+V+VLSAC+H G ++EGQK+F+ M G P EHY+CM+DLLGR+G L +A
Sbjct: 537 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 596
Query: 494 IEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKW 536
I +MP ++ + AA L+ EP + Y++L+N++A++G+W
Sbjct: 597 INSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQW 656
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
++V IR+ M++R + K+ G SWIEV+ ++H F + SHP +I+ L++++ K+K+
Sbjct: 657 KDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 716
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY+PD KE+ L HSEK+AVAFGL+STS +PI + KNLR+CGDCH AI
Sbjct: 717 GYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAI 776
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K+IS GREI VRD+ RFH K+G CSC DYW
Sbjct: 777 KYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 246/498 (49%), Gaps = 61/498 (12%)
Query: 54 HHAFN-------QTQHANVFSFNVLLAAYAR----QLRIASARQLFDQIPQPDLVSYNTL 102
HHAF+ Q ++ ++++LL + R QL R+L + D V NTL
Sbjct: 8 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 67
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN---------------LCL 147
IS Y+ CGDTE+A +F+ M KR D + S +++ +NN L
Sbjct: 68 ISLYSKCGDTETARLIFEGMGNKR---DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 148 IKQLHCLAIY---CGFDHYASVNNSLLTCYSRNGFLD---------------------EA 183
+C A C +YA V + + G+L+ A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+VF +M E ++ V+W M+ + Q +A+ LF +M D +T +S+L+A T
Sbjct: 185 YKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEIPQPDLVLW 301
L L G Q H+ +I+ G + +G L+D+YAKC+ D + D KVFE++P+ +++ W
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
+I+ Y Q E +A+ F K+ P+ SF V+ AC NLS P G+Q+++ +
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 363
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ I S V N+L++MY++ G +EDAR+ FD + E N VS N+++ GYA++ EA
Sbjct: 364 KLGIASVN-CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 422
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMID 479
LF + +T I + TF S+LS A G + +G++ + ++K G++ + +I
Sbjct: 423 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG--GYKSNQCICNALIS 480
Query: 480 LLGRAGKLTDAERLIEAM 497
+ R G + A ++ M
Sbjct: 481 MYSRCGNIEAAFQVFNEM 498
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 228/452 (50%), Gaps = 29/452 (6%)
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS 165
D G A S M ++ D T S L+ + N L K +H + G + +
Sbjct: 3 DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 62
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V N+L++ YS+ G + A+ +F MG +D VSW++MV + + +A+ F +M+ L
Sbjct: 63 VLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 122
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMR 284
+ Y A+++ A ++ G + ++K+G+ + +G LID++ K SGD+
Sbjct: 123 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLG 182
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF+++P+ +LV W MI+ ++Q D A+ F + GY PD ++ V+SAC
Sbjct: 183 SAYKVFDKMPERNLVTWTLMITRFAQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSAC 241
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC---GNLEDARRLFDRMPEHNT 400
+ L +LGKQ+H+ I++ + + + V +LV MY+KC G+++D+R++F++MPEHN
Sbjct: 242 TELGLLALGKQLHSRVIRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 401 VSLNSMIAGYAQHG-IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
+S ++I Y Q G EA+ LF M+ +I P + +F SVL AC + G++ +S
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 360
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSN 519
+ G + +I + R+G++ DA + + L N
Sbjct: 361 YAVKL-GIASVNCVGNSLISMYARSGRMEDARKAFDI------------------LFEKN 401
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
V Y + + YA + K EE + + D G+
Sbjct: 402 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 433
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 150/305 (49%), Gaps = 12/305 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YAR R+ AR+ FD + + +LVSYN ++ YA +E A LF ++ +
Sbjct: 375 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 434
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + L++ +++ + K Q+H + G+ + N+L++ YSR G ++ A +V
Sbjct: 435 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 494
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E ++ +SW SM+ + +H AL++F +M+ + T ++L+A + +
Sbjct: 495 FNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 553
Query: 247 LVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
+ G + F++ + G + ++DL + SG + + M+ +P D ++W T+
Sbjct: 554 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR-SGLLVEAMEFINSMPLMADALVWRTL 612
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
+ + + LG + PDD + ++ SNL S G+ + I+ +
Sbjct: 613 LGAC---RVHGNTELGRHAAEMILEQEPDDPAAYILL---SNLHASAGQWKDVVKIRKSM 666
Query: 365 RSNRI 369
+ +
Sbjct: 667 KERNL 671
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/660 (36%), Positives = 371/660 (56%), Gaps = 42/660 (6%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+ A F++ +V+ + +++ YAR R A QLF ++P D+VS+N++I DC
Sbjct: 27 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 86
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
D A LF +M E+ + ++G + I+ L F A+ N S
Sbjct: 87 ADLTMARKLFDEMPERSVVSWTTMINGFLQFGK-----IEVAEGLFYKMPFRDIAAWN-S 140
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQL 227
++ Y NG +++ R+F EM ++ +SW SM+ QH EAL LF++M+ +++
Sbjct: 141 MIYGYCCNGRVEDGLRLFQEM-PCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 199
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
T ++TA + L G+Q HAH+ K G+ +++I + LI YA C M D +
Sbjct: 200 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK-QMEDSL 258
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++V+W +++GY ++ D AL F ++ R G P+ SF +++C L
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHED-ALKVFGEMMREGVLPNQSSFTSALNSCCGL 317
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G++IH +K+ + ++ + V N+L+ MY +CGNL D +F R+ + N VS NS+
Sbjct: 318 EALDWGREIHTAAVKLGLETD-VFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSV 376
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G AQHG GM AL F M+ + + P ITF +LSAC+H+G +G+ F +
Sbjct: 377 IVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKS 436
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
E + +HY+CM+D+LGR+GKL +AE LI MP S +A +AA
Sbjct: 437 AEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAA 496
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ LEP + YV+L+N+YA++ +W +V+ IRR M+ RG+ K+PG SWI +K + F
Sbjct: 497 KCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEF 556
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
++ D SHP I+ LE + K+K+ GYVPD KE L +HSE+LA+ F
Sbjct: 557 LSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGF 616
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST G I VMKNLR+CGDCH+AIK I+ I R+I VRD+ RFH F DGRCSCGDYW
Sbjct: 617 GLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 153/380 (40%), Gaps = 55/380 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+ C L G +HA K F AY+S I Y+ C + + F+
Sbjct: 205 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 264
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV-SYNTLISAYADCGDTESALSLF 119
H NV + L+ Y + A ++F ++ + ++ + ++ SA C E+
Sbjct: 265 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA----- 319
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
L +++H A+ G + V NSL+ Y R G
Sbjct: 320 -------------------------LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGN 354
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L++ +F + + K+ VSWNS++V QH G+ AL F +MV + D T +L+
Sbjct: 355 LNDGVVIFKRISK-KNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLS 413
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL------IDLYAKCSGDMRDCMKVFEEI 293
A + G+ + F +N L +D+ + SG + + ++ +
Sbjct: 414 ACSH-----SGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGR-SGKLEEAEELIRNM 467
Query: 294 P-QPDLVLWNTMISGYS--QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
P + + ++W ++S + K E +++A C L CS V+ SNL S
Sbjct: 468 PVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLE------PHCSSAYVL--LSNLYAS 519
Query: 351 LGKQIHALTIKIEIRSNRIS 370
+ I+ E++ I+
Sbjct: 520 ASRWSDVSRIRREMKQRGIT 539
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/660 (36%), Positives = 371/660 (56%), Gaps = 42/660 (6%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+ A F++ +V+ + +++ YAR R A QLF ++P D+VS+N++I DC
Sbjct: 11 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 70
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
D A LF +M E+ + ++G + I+ L F A+ N S
Sbjct: 71 ADLTMARKLFDEMPERSVVSWTTMINGFLQFGK-----IEVAEGLFYKMPFRDIAAWN-S 124
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQL 227
++ Y NG +++ R+F EM ++ +SW SM+ QH EAL LF++M+ +++
Sbjct: 125 MIYGYCCNGRVEDGLRLFQEM-PCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEV 183
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
T ++TA + L G+Q HAH+ K G+ +++I + LI YA C M D +
Sbjct: 184 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK-QMEDSL 242
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++V+W +++GY ++ D AL F ++ R G P+ SF +++C L
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHED-ALKVFGEMMREGVLPNQSSFTSALNSCCGL 301
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G++IH +K+ + ++ + V N+L+ MY +CGNL D +F R+ + N VS NS+
Sbjct: 302 EALDWGREIHTAAVKLGLETD-VFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSV 360
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G AQHG GM AL F M+ + + P ITF +LSAC+H+G +G+ F +
Sbjct: 361 IVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKS 420
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
E + +HY+CM+D+LGR+GKL +AE LI MP S +A +AA
Sbjct: 421 AEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAA 480
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ LEP + YV+L+N+YA++ +W +V+ IRR M+ RG+ K+PG SWI +K + F
Sbjct: 481 KCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEF 540
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
++ D SHP I+ LE + K+K+ GYVPD KE L +HSE+LA+ F
Sbjct: 541 LSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGF 600
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST G I VMKNLR+CGDCH+AIK I+ I R+I VRD+ RFH F DGRCSCGDYW
Sbjct: 601 GLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 153/380 (40%), Gaps = 55/380 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+ C L G +HA K F AY+S I Y+ C + + F+
Sbjct: 189 TYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGK 248
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV-SYNTLISAYADCGDTESALSLF 119
H NV + L+ Y + A ++F ++ + ++ + ++ SA C E+
Sbjct: 249 LHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA----- 303
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
L +++H A+ G + V NSL+ Y R G
Sbjct: 304 -------------------------LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGN 338
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L++ +F + + K+ VSWNS++V QH G+ AL F +MV + D T +L+
Sbjct: 339 LNDGVVIFKRISK-KNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLS 397
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL------IDLYAKCSGDMRDCMKVFEEI 293
A + G+ + F +N L +D+ + SG + + ++ +
Sbjct: 398 ACSH-----SGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGR-SGKLEEAEELIRNM 451
Query: 294 P-QPDLVLWNTMISGYS--QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
P + + ++W ++S + K E +++A C L CS V+ SNL S
Sbjct: 452 PVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLE------PHCSSAYVL--LSNLYAS 503
Query: 351 LGKQIHALTIKIEIRSNRIS 370
+ I+ E++ I+
Sbjct: 504 ASRWSDVSRIRREMKQRGIT 523
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/633 (37%), Positives = 381/633 (60%), Gaps = 40/633 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ SA ++FD++P+ +LV++ +I+ +A G A+ LF DM + D FT S +++A
Sbjct: 199 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 258
Query: 141 SS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKD 195
+ L L KQLH I G V SL+ Y++ +G +D++++VF +M E +
Sbjct: 259 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HN 317
Query: 196 EVSWNSMVVAYGQHRE-GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+SW +++ AY Q E EA++LF +M+S + + ++ +S+L A +L D G Q +
Sbjct: 318 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 377
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
++ +K G + +G+ LI +YA+ SG M D K F+ + + +LV +N ++ GY+ K
Sbjct: 378 SYAVKLGIASVNCVGNSLISMYAR-SGRMEDARKAFDILFEKNLVSYNAIVDGYA-KNLK 435
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
S++A F ++ G +F ++S +++ G+QIH +K +SN+ + N
Sbjct: 436 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ-CICN 494
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL++MYS+CGN+E A ++F+ M + N +S SMI G+A+HG AL +F MLET P
Sbjct: 495 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 554
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
IT+V+VLSAC+H G ++EGQK+F+ M G P EHY+CM+DLLGR+G L +A
Sbjct: 555 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 614
Query: 494 IEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKW 536
I +MP ++ + AA L+ EP + Y++L+N++A++G+W
Sbjct: 615 INSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQW 674
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
++V IR+ M++R + K+ G SWIEV+ ++H F + SHP +I+ L++++ K+K+
Sbjct: 675 KDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 734
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY+PD KE+ L HSEK+AVAFGL+STS +PI + KNLR+CGDCH AI
Sbjct: 735 GYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAI 794
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K+IS GREI VRD+ RFH K+G CSC DYW
Sbjct: 795 KYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 246/498 (49%), Gaps = 61/498 (12%)
Query: 54 HHAFN-------QTQHANVFSFNVLLAAYAR----QLRIASARQLFDQIPQPDLVSYNTL 102
HHAF+ Q ++ ++++LL + R QL R+L + D V NTL
Sbjct: 26 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 85
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN---------------LCL 147
IS Y+ CGDTE+A +F+ M KR D + S +++ +NN L
Sbjct: 86 ISLYSKCGDTETARLIFEGMGNKR---DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 148 IKQLHCLAIY---CGFDHYASVNNSLLTCYSRNGFLD---------------------EA 183
+C A C +YA V + + G+L+ A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+VF +M E ++ V+W M+ + Q +A+ LF +M D +T +S+L+A T
Sbjct: 203 YKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEIPQPDLVLW 301
L L G Q H+ +I+ G + +G L+D+YAKC+ D + D KVFE++P+ +++ W
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
+I+ Y Q E +A+ F K+ P+ SF V+ AC NLS P G+Q+++ +
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 381
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ I S V N+L++MY++ G +EDAR+ FD + E N VS N+++ GYA++ EA
Sbjct: 382 KLGIASVN-CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 440
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMID 479
LF + +T I + TF S+LS A G + +G++ + ++K G++ + +I
Sbjct: 441 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG--GYKSNQCICNALIS 498
Query: 480 LLGRAGKLTDAERLIEAM 497
+ R G + A ++ M
Sbjct: 499 MYSRCGNIEAAFQVFNEM 516
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 229/452 (50%), Gaps = 29/452 (6%)
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYAS 165
D G A S M ++ D T S L+ + N L K +H + G + +
Sbjct: 21 DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 80
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V N+L++ YS+ G + A+ +F MG +D VSW++MV + + +A+ F +M+ L
Sbjct: 81 VLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 140
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMR 284
+ Y A+++ A ++ G + ++K+G+ + + +G LID++ K SGD+
Sbjct: 141 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLG 200
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF+++P+ +LV W MI+ ++Q D A+ F + GY PD ++ V+SAC
Sbjct: 201 SAYKVFDKMPERNLVTWTLMITRFAQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSAC 259
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC---GNLEDARRLFDRMPEHNT 400
+ L +LGKQ+H+ I++ + + + V +LV MY+KC G+++D+R++F++MPEHN
Sbjct: 260 TELGLLALGKQLHSRVIRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 318
Query: 401 VSLNSMIAGYAQHG-IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
+S ++I Y Q G EA+ LF M+ +I P + +F SVL AC + G++ +S
Sbjct: 319 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 378
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSN 519
+ G + +I + R+G++ DA + + L N
Sbjct: 379 YAVKL-GIASVNCVGNSLISMYARSGRMEDARKAFDI------------------LFEKN 419
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
V Y + + YA + K EE + + D G+
Sbjct: 420 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 451
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 150/305 (49%), Gaps = 12/305 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YAR R+ AR+ FD + + +LVSYN ++ YA +E A LF ++ +
Sbjct: 393 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 452
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + L++ +++ + K Q+H + G+ + N+L++ YSR G ++ A +V
Sbjct: 453 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 512
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E ++ +SW SM+ + +H AL++F +M+ + T ++L+A + +
Sbjct: 513 FNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 571
Query: 247 LVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
+ G + F++ + G + ++DL + SG + + M+ +P D ++W T+
Sbjct: 572 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR-SGLLVEAMEFINSMPLMADALVWRTL 630
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
+ + + LG + PDD + ++ SNL S G+ + I+ +
Sbjct: 631 LGAC---RVHGNTELGRHAAEMILEQEPDDPAAYILL---SNLHASAGQWKDVVKIRKSM 684
Query: 365 RSNRI 369
+ +
Sbjct: 685 KERNL 689
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/631 (38%), Positives = 360/631 (57%), Gaps = 39/631 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ SA+Q F I D+V YN LI+A A G A + MR + T ++ A
Sbjct: 280 VDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339
Query: 141 SSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S + L K +H G + N+L++ Y+R G L +A+ +FY M + +D +S
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK-RDLIS 398
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WN+++ Y + + EA++L+++M S + T +L+A + G H ++
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+SG N H+ + L+++Y +C G + + VFE D++ WN+MI+G++Q Y + A
Sbjct: 459 RSGIKSNGHLANALMNMYRRC-GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY-ETA 516
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
F+++ PD+ +F V+S C N LGKQIH + ++ + +++ NAL+
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD-VNLGNALIN 575
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN--IPPTN 435
MY +CG+L+DAR +F + + +S +MI G A G M+A+ LF W ++ PP
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF-WQMQNEGFRPPDG 634
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
TF S+LSAC H G V EG + FS M+ +G P EHY C++ LLGRA + +AE LI
Sbjct: 635 STFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLIN 694
Query: 496 AMPFNP---------------GSIALK--AANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
MPF P G+IAL AAN+ L+L N Y++L+N+YAA+G+W++
Sbjct: 695 QMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDD 754
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
VA IRR+M RG++K+PG SWIEV +H F+A D SHP EI+ L+ +S +M++AGY
Sbjct: 755 VAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 814
Query: 599 VPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
PD +E L HSE+LA+A+GL+ T G PI + KNLRICGDCH A KF
Sbjct: 815 FPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKF 874
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + GREI RD+ RFH FK+G+CSC DYW
Sbjct: 875 ISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 261/502 (51%), Gaps = 45/502 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C +R L K +HA ++ V +LSN I +Y KC + AH
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH------ 82
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+F ++P+ D++S+N+LIS YA G + A LF+
Sbjct: 83 -------------------------QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFE 117
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ F + T ++TA S L K++H I G+ V NSLL+ Y + G
Sbjct: 118 EMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG 177
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A++VF + +D VS+N+M+ Y Q E L LF +M S + D T ++L
Sbjct: 178 DLPRARQVFAGISP-RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
AFT+ L G + H ++ G + + +G+ L+ + +C GD+ + F+ I D+
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC-GDVDSAKQAFKGIADRDV 295
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
V++N +I+ +Q ++ +A + ++ G + +++ +++ACS S +L GK IH
Sbjct: 296 VVYNALIAALAQ-HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST-SKALEAGKLIH 353
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ I + S+ + + NAL++MY++CG+L AR LF MP+ + +S N++IAGYA+
Sbjct: 354 S-HISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR 412
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF--GFEPEGEHY 474
EA+RL++ M + P +TF+ +LSACA++ A+G+ + +D+ G + G
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM---IHEDILRSGIKSNGHLA 469
Query: 475 SCMIDLLGRAGKLTDAERLIEA 496
+ ++++ R G L +A+ + E
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEG 491
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 195/376 (51%), Gaps = 12/376 (3%)
Query: 128 DTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+TD T L+ + L K++H + G ++N L+ Y + + +A +
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
VF EM +D +SWNS++ Y Q +A QLF+EM + + T SILTA S
Sbjct: 84 VFKEMPR-RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+L G + H+ +IK+G+ ++ + + L+ +Y KC GD+ +VF I D+V +NTM+
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC-GDLPRARQVFAGISPRDVVSYNTML 201
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL---GKQIHALTIKI 362
Y+QK Y + LG F +++ G PD +++ ++ A + +PS+ GK+IH LT++
Sbjct: 202 GLYAQK-AYVKECLGLFGQMSSEGISPDKVTYINLLDAFT--TPSMLDEGKRIHKLTVEE 258
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ S+ I V ALV M +CG+++ A++ F + + + V N++IA AQHG +EA
Sbjct: 259 GLNSD-IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
+ M + T++S+L+AC+ T K E K G + + + +I +
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACS-TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 483 RAGKLTDAERLIEAMP 498
R G L A L MP
Sbjct: 377 RCGDLPKARELFYTMP 392
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 58/320 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C GK +H L++ + + +L+N + +Y +CG L A + F T
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q +V S+N ++A +A+ G E+A LF+
Sbjct: 493 QARDVISWNSMIAGHAQH-------------------------------GSYETAYKLFQ 521
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ + + D T + +++ N L L KQ+H G ++ N+L+ Y R G
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCG 581
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASI 237
L +A+ VF+ + + +D +SW +M+ E ++A++LF +M + D T SI
Sbjct: 582 SLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSI 640
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS-----GLIDLYAKCSG------DMRDC 286
L+A HA L+ G+ S + S I+ Y G ++
Sbjct: 641 LSACN-----------HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEA 689
Query: 287 MKVFEEIP-QPDLVLWNTMI 305
+ ++P PD +W T++
Sbjct: 690 ETLINQMPFPPDAAVWETLL 709
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 141/327 (43%), Gaps = 57/327 (17%)
Query: 333 DDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D ++V ++ C+ L P K+IHA ++ + + I ++N L+ MY KC ++ DA +
Sbjct: 26 DRATYVALLQNCTRKRLLPE-AKRIHAQMVEAGVGPD-IFLSNLLINMYVKCRSVLDAHQ 83
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+F MP + +S NS+I+ YAQ G +A +LFE M P IT++S+L+AC +
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAAN 510
+ G+K S + G++ + + ++ + G+ G L A ++
Sbjct: 144 LENGKKIHSQIIKA-GYQRDPRVQNSLLSMYGKCGDLPRARQV----------------- 185
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
F + P + V Y + +YA +E + M G I K ++ +
Sbjct: 186 -FAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG---------ISPDKVTYINL 235
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ + P + D+ KR+ KL V GL S LV
Sbjct: 236 LDAFTTPSML--------------------DEGKRI----HKLTVEEGLNSDIRVGTALV 271
Query: 631 MKNLRICGDCHNAIKFISAIAGREITV 657
+R CGD +A + IA R++ V
Sbjct: 272 TMCVR-CGDVDSAKQAFKGIADRDVVV 297
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/670 (36%), Positives = 371/670 (55%), Gaps = 45/670 (6%)
Query: 49 CLSAAHHAFNQTQHANVFSF---------NVLLAAYARQLRIASARQLFDQIPQPDLVSY 99
C S A + HA V L++ Y + + ARQ+FD + + D+ ++
Sbjct: 172 CSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTF 231
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIY 157
N +I YA GD E A LF M+++ F + + ++ S L K +H +
Sbjct: 232 NVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMN 291
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G V +L+ Y G ++ A+RVF +M +++D VSW M+ Y ++ +A
Sbjct: 292 TGLVDDVRVATALIRMYMGCGSIEGARRVFDKM-KVRDVVSWTVMIRGYAENSNIEDAFG 350
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF M + D T I+ A S DL + H+ ++++GF + + + L+ +YA
Sbjct: 351 LFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYA 410
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC G ++D +VF+ + + D+V W+ MI Y + ++A F + R PD ++
Sbjct: 411 KC-GAIKDARQVFDAMSRRDVVSWSAMIGAYVENG-CGEEAFETFHLMKRNNVEPDVVTY 468
Query: 338 VCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ +++AC +L LG +I+ IK ++ S+ I V NAL+ M K G++E AR +F+ M
Sbjct: 469 INLLNACGHLGALDLGMEIYTQAIKADLVSH-IPVGNALINMNVKHGSIERARYIFENMV 527
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + V+ N MI GY+ HG EAL LF+ ML+ P ++TFV VLSAC+ G V EG++
Sbjct: 528 QRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRR 587
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
+FS + D G P E Y CM+DLLGRAG+L +AE LI MP P S
Sbjct: 588 FFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIY 647
Query: 504 ----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+A +AA L EP + YV L+++YAA+G WE VA +R++M RGV+K+ G +W
Sbjct: 648 GNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTW 707
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLV 607
IEV+ ++H FV ED SHP EI+ L + +K+ GY+P +KE+ +
Sbjct: 708 IEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAIS 767
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
+HSEKLA+A+G+LS G PI + KNLR+CGDCH+A KFIS + GREI RD RFH FK
Sbjct: 768 YHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFK 827
Query: 668 DGRCSCGDYW 677
+G CSCGDYW
Sbjct: 828 NGVCSCGDYW 837
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 240/473 (50%), Gaps = 19/473 (4%)
Query: 37 SNHFILLYSKCGCLSAA-------HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
S ++ L+ +C L A H + N++ N L+ ++ + ARQ FD
Sbjct: 61 SRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFD 120
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCL 147
+ +V++N +I+ YA G + A +LF+ M ++ + T ++ A S+ L L
Sbjct: 121 SVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKL 180
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
K+ H I GF + +L++ Y + G +D A++VF + + +D ++N M+ Y
Sbjct: 181 GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYK-RDVSTFNVMIGGYA 239
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ +G +A QLF M + + SIL ++ E L G HA + +G +
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + LI +Y C G + +VF+++ D+V W MI GY++ D A G F +
Sbjct: 300 VATALIRMYMGC-GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIED-AFGLFATMQE 357
Query: 328 VGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G PD +++ +I+AC S+ SL ++IH+ ++ ++ + V+ ALV MY+KCG ++
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLL-VDTALVHMYAKCGAIK 416
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
DAR++FD M + VS ++MI Y ++G G EA F M N+ P +T++++L+AC
Sbjct: 417 DARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACG 476
Query: 447 HTGKVAEGQKYFS--MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
H G + G + ++ + D+ P G + +I++ + G + A + E M
Sbjct: 477 HLGALDLGMEIYTQAIKADLVSHIPVG---NALINMNVKHGSIERARYIFENM 526
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 33/330 (10%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+D T + L D G Q H+I+SG N + + LI L++ C G+M + +
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSIC-GNMLEARQ 117
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
F+ + +V WN +I+GY+Q + +A F+++ P +F+ V+ ACS S
Sbjct: 118 TFDSVENKTVVTWNAIIAGYAQLG-HVKEAFALFRQMVDEAMEPSIITFLIVLDACS--S 174
Query: 349 PS---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
P+ LGK+ HA IK+ S+ + ALV+MY K G+++ AR++FD + + + + N
Sbjct: 175 PAGLKLGKEFHAQVIKVGFVSD-FRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNV 233
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI GYA+ G G +A +LF M + P I+F+S+L C+ +A G+
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAV-------- 285
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEA---MPFNPGSIALKAANHFLQLEPSNAVP 522
H CM L D R+ A M GSI A F +++ + V
Sbjct: 286 -------HAQCM------NTGLVDDVRVATALIRMYMGCGSIE-GARRVFDKMKVRDVVS 331
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ ++ YA + E+ + M++ G+Q
Sbjct: 332 WTVMIRGYAENSNIEDAFGLFATMQEEGIQ 361
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 319 LGCFKKLNRVGY---HPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNA 374
+G L+R+G H D ++V + C L + LGKQ+ I+ R I N
Sbjct: 43 VGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQ-SGRQLNIYELNT 101
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L+ ++S CGN+ +AR+ FD + V+ N++IAGYAQ G EA LF M++ + P+
Sbjct: 102 LIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITF+ VL AC+ + G+++ + + + GF + + ++ + + G + A ++
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKV-GFVSDFRIGTALVSMYVKGGSMDGARQVF 220
Query: 495 EAM 497
+ +
Sbjct: 221 DGL 223
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 3 RQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNH-------------FILLYSKCGC 49
RQV + RRD+V+ ++ Y++N A+ + H +I L + CG
Sbjct: 419 RQVFDA-MSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477
Query: 50 LSA---AHHAFNQTQHANVFSF----NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
L A + Q A++ S N L+ + I AR +F+ + Q D+V++N +
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC---- 158
I Y+ G+ AL LF M ++RF + T G+++A S +++ Y
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACS-RAGFVEEGRRFFSYLLDGR 596
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G + ++ R G LDEA+ + M + W++++ A
Sbjct: 597 GIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAA 643
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/777 (33%), Positives = 402/777 (51%), Gaps = 105/777 (13%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGC-----LSAAHHAFN 58
++L+ C + G+++HA +K + SAYL N+ + Y+ A F+
Sbjct: 28 RLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFD 87
Query: 59 QTQHA--NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+ A NVF++N LL+ YA+ R+A AR +F ++P+ D VS+ ++ G A+
Sbjct: 88 EIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAI 147
Query: 117 SLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+F DM FTL+ +++ A++ + +++H + G V NS+L Y
Sbjct: 148 KMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMY 207
Query: 175 SRNGFLDEAKRVFYEMGE----------------------------IKDE--VSWNSMVV 204
+ G + A+ VF M E + D VSWN+++
Sbjct: 208 GKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIA 267
Query: 205 AYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
Y Q+ +AL F M+S + D +T+ S+L+A +L + G Q HA++++S
Sbjct: 268 GYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMP 327
Query: 264 QNSHIGSGLIDLYAKCS--------------------------------GDMRDCMKVFE 291
+ + LI +YAK GDM+ ++F+
Sbjct: 328 YIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFD 387
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PS 350
+ D+V W MI GY Q ++D+A+ F+ + R G P+ + V+S C++L+
Sbjct: 388 VMSNRDVVAWTAMIVGYEQNG-HNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLE 446
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
GKQIH I+ ++ SV+N++V MY++ G+L ARR+FDR+ TV+ SMI
Sbjct: 447 YGKQIHCKAIR-SLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVA 505
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
AQHG+G +A+ LFE ML + P ITFV VLSAC H G V EG++YF ++D G P
Sbjct: 506 LAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVP 565
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHF 512
E HY+CM+DLL RAG ++A+ I+ MP P +IA AA
Sbjct: 566 EMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKL 625
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L ++P N+ Y L+N+Y+A G+W + A I + +D+ V+K+ GFSW + ++HVF A+
Sbjct: 626 LSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGAD 685
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP ++ +M +K+AG+VPD KE+ L HSEKLA+AFGL+
Sbjct: 686 DVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLV 745
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST + +MKNLR+C DCH AIKFIS +A REI +RD RFH FKDG CSC DYW
Sbjct: 746 STPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/711 (35%), Positives = 395/711 (55%), Gaps = 74/711 (10%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIA 82
A+ L+N V ++A +S Y + S A F++ H ++FS+N++L YAR R+
Sbjct: 58 AMPLRNSVSYNAMISG-----YLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLR 112
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
AR LFD +P+ D+VS+N ++S Y G + A +F M K + + +GL+ A
Sbjct: 113 DARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYV 168
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
+ L + ++ + N L+ Y + L +A+++F ++ ++D +SWN+M
Sbjct: 169 RSGRLEEARRLFESKSDWELISC--NCLMGGYVKRNMLGDARQLFDQI-PVRDLISWNTM 225
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS----------LEDLVGGLQ 252
+ Y Q + +A +LF+E D++T +++ A+ +++ +
Sbjct: 226 ISGYAQDGDLSQARRLFEESPVR----DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKRE 281
Query: 253 FHAHLIKSGFHQNS---------------HIGSGLIDLYAKC-SGDMRDCMKVFEEIPQP 296
+++ +G+ Q +IGS I + C +GD+ +F+ +PQ
Sbjct: 282 MSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQR 341
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D V W +I+GY+Q Y ++A+ ++ R G + +F C +SAC++++ LGKQ+
Sbjct: 342 DSVSWAAIIAGYAQNGLY-EEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQV 400
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H ++ + V NALV MY KCG +++A +F + + VS N+M+AGYA+HG
Sbjct: 401 HGQVVRTGYEKGCL-VGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGF 459
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +AL +FE M+ + P IT V VLSAC+HTG G +YF M +G P +HY+
Sbjct: 460 GRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYA 519
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPS 518
CMIDLLGRAG L +A+ LI MPF P G++ L +AA ++EP
Sbjct: 520 CMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPH 579
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N+ YV+L+N+YAASG+W +V+ +R MR GVQK PG+SW+EV+ ++H F D HP
Sbjct: 580 NSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPE 639
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
I+ +LEE+ KMK GYV +K+ L +HSEKLAVAFG+L+ G+
Sbjct: 640 KGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGK 699
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCHNAIK IS I GR I VRD++R+H F +G CSC DYW
Sbjct: 700 PIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L GK +H ++ + N + +Y KCGC+ A+ F
Sbjct: 380 TFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGV 439
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
QH ++ S+N +LA YAR A +F+ + +PD ++ ++SA + G T+
Sbjct: 440 QHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGT 499
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + G+ S + C+I L R
Sbjct: 500 EYFHSMNKD---------YGITPNSKHYACMIDLL-----------------------GR 527
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G L+EA+ + M D +W +++ A +G G +A ++ +M G MY
Sbjct: 528 AGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSG--MYV 585
Query: 234 LASILTA 240
L S L A
Sbjct: 586 LLSNLYA 592
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 57/257 (22%)
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI---------GMEALRLFEW- 425
++ + + G+ + A +FD MP N+VS N+MI+GY ++ M LF W
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 426 ----------------MLETNIPPTN-ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
ML ++P + +++ ++LS +G V E + F M
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS 159
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP-------------FNPGSIALKAANHFLQL 515
G ++ R+G+L +A RL E+ + ++ A F Q+
Sbjct: 160 WNG-----LLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQI 214
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ + + + + YA G +++ RRL + V+ F+W + ++ +V +DG
Sbjct: 215 PVRDLISWNTMISGYAQDG---DLSQARRLFEESPVRDV--FTWTAM---VYAYV-QDG- 264
Query: 576 HPMIKEIHNYLEEMSRK 592
M+ E +EM +K
Sbjct: 265 --MLDEARRVFDEMPQK 279
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/647 (37%), Positives = 368/647 (56%), Gaps = 35/647 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+N+F+ ++ YA+ +I A ++F+++PQ DLVS+NT+++ YA G A+ +
Sbjct: 174 QSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ 233
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+E D TL ++ A ++ L + + +H A GF++ +V ++L Y + G
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS 293
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+ VF M ++ VSWN+M+ Y Q+ E EA F +M+ + ++ L
Sbjct: 294 VRSARLVFKGMSS-RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALH 352
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A +L DL G H L + + + + LI +Y+KC + VF + +V
Sbjct: 353 ACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCK-RVDIAASVFGNLKHKTVV 411
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHAL 358
WN MI GY+Q ++AL F ++ PD + V VI+A ++LS + K IH L
Sbjct: 412 TWNAMILGYAQNG-CVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGL 470
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + N + V AL+ ++KCG ++ AR+LFD M E + ++ N+MI GY +G G E
Sbjct: 471 AIRTLMDKN-VFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGRE 529
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M ++ P ITF+SV++AC+H+G V EG YF MK+ +G EP +HY M+
Sbjct: 530 ALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMV 589
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAV 521
DLLGRAG+L DA + I+ MP PG L K A+ L+P +
Sbjct: 590 DLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGG 649
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+LAN+YA++ W++VA +R M +G+QK PG S +E++ ++H F + +HP K
Sbjct: 650 YHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKR 709
Query: 582 IHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
I+ YLE + +MK AGYVPD KE+ L HSE+LA+AFGLL+T +G I +
Sbjct: 710 IYAYLETLGDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHI 769
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH A K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 770 RKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 218/436 (50%), Gaps = 20/436 (4%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L++ + + I A ++F+ + V Y+T++ YA A+ ++ MR
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 131 GFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ + L+ S NL L +++H + I GF +++ Y++ +++A ++F
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M + +D VSWN++V Y Q+ A+Q+ +M D TL S+L A L+ L
Sbjct: 202 RMPQ-RDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALR 260
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H + ++GF ++ + ++D Y KC G +R VF+ + ++V WNTMI GY
Sbjct: 261 IGRSIHGYAFRAGFEYMVNVATAMLDTYFKC-GSVRSARLVFKGMSSRNVVSWNTMIDGY 319
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
+Q E S++A F K+ G P + S + + AC+NL G+ +H L + +I +
Sbjct: 320 AQNGE-SEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+SV N+L++MYSKC ++ A +F + V+ N+MI GYAQ+G EAL LF M
Sbjct: 379 -VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQ 437
Query: 428 ETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMM-KDMFGFEPEGEHYSCMIDLL 481
+I P + T VSV++A A K G ++M K++F + +ID
Sbjct: 438 SHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC-------TALIDTH 490
Query: 482 GRAGKLTDAERLIEAM 497
+ G + A +L + M
Sbjct: 491 AKCGAIQTARKLFDLM 506
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 171/326 (52%), Gaps = 9/326 (2%)
Query: 148 IKQLH---CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+K+LH L I GF + L++ + + + EA RVF E E K +V +++M+
Sbjct: 57 LKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVF-EPVEHKLDVLYHTMLK 115
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y ++ +A++ ++ M ++ +Y +L DL G + H +I +GF
Sbjct: 116 GYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQS 175
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
N + +++LYAKC + D K+FE +PQ DLV WNT+++GY+Q ++ +A+ +
Sbjct: 176 NLFAMTAVVNLYAKCR-QIEDAYKMFERMPQRDLVSWNTVVAGYAQN-GFARRAVQVVLQ 233
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G PD + V V+ A ++L +G+ IH + ++V A++ Y KCG
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEY-MVNVATAMLDTYFKCG 292
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
++ AR +F M N VS N+MI GYAQ+G EA F ML+ + PTN++ + L
Sbjct: 293 SVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALH 352
Query: 444 ACAHTGKVAEGQKYFSMMKD-MFGFE 468
ACA+ G + G+ ++ + GF+
Sbjct: 353 ACANLGDLERGRYVHRLLDEKKIGFD 378
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 43/309 (13%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C DL G+ +H L + + F + N I +YSKC + A F +H V
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
++N ++ YA+ G AL+LF +M+
Sbjct: 411 VTWNAMILGYAQN-------------------------------GCVNEALNLFCEMQSH 439
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D FTL +ITA + +L + +Q +H LAI D V +L+ +++ G +
Sbjct: 440 DIKPDSFTLVSVITALA-DLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQT 498
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+++F M E + ++WN+M+ YG + G EAL LF EM + + + T S++ A
Sbjct: 499 ARKLFDLMQE-RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAA-C 556
Query: 243 SLEDLVGGLQFHAHLIKSGFHQN---SHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
S LV ++ +K + H G+ ++DL + +G + D K +++P +P +
Sbjct: 557 SHSGLVEEGMYYFESMKENYGLEPTMDHYGA-MVDLLGR-AGRLDDAWKFIQDMPVKPGI 614
Query: 299 VLWNTMISG 307
+ M+
Sbjct: 615 TVLGAMLGA 623
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++++ K ++ +A R+F+ + V ++M+ GYA++ +A+R +E M + P
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
F +L + G++ M+ GF+ + +++L + ++ DA ++
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITN-GFQSNLFAMTAVVNLYAKCRQIEDAYKMF 200
Query: 495 EAMP 498
E MP
Sbjct: 201 ERMP 204
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/680 (36%), Positives = 382/680 (56%), Gaps = 49/680 (7%)
Query: 40 FILLYSKCGCLSAAHHAFNQ-------TQHANVFSFNVLLAAYARQLRIASARQLFDQIP 92
+I L + C L A + H N N LL +Y + + SAR+LF ++
Sbjct: 143 YITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMC 202
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQ 150
D VS+N +I+ YA+ G E A+ LF +M+ F FT + +I+AS ++ +Q
Sbjct: 203 GWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQ 262
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+H + F V N+ L YS++ ++E +++F EM E+ D VS+N ++ AY
Sbjct: 263 IHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPEL-DGVSYNVIITAYAWVG 321
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+ E++ LFQE+ + ++L+ S DL G Q HA ++ S + + +
Sbjct: 322 KVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSN 381
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
L+D+YAKC G + ++F + V W MIS Q+ + + L F ++ R
Sbjct: 382 SLVDMYAKC-GKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH-ENGLKLFYEMRRANV 439
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCGNLED 387
D +F CV+ A +NL S LGKQ+H+ I RS ++V + AL+ MY+ C +++D
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCVI----RSGFMNVYSGCALLDMYANCASIKD 495
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A + F+ M E N V+ N++++ YAQ+G G L+ FE M+ + P +++F+ +L+AC+H
Sbjct: 496 AIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSH 555
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI--- 504
V EG KYF+ M ++ P+ EHY+ M+D L R+G+ +AE+L+ MPF P I
Sbjct: 556 CRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWT 615
Query: 505 --------------ALKAANHFLQLEP-SNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
A KAA ++ +A PYV ++NI+A +G+W+ V +++ MRDR
Sbjct: 616 SVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDR 675
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--------- 600
GV+K P +SW+E+K ++HVF A D HP EI +E ++ +M++ GY P
Sbjct: 676 GVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNV 735
Query: 601 DKEKR---LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
DKE + L +HSE+LA+AF L++T G PILVMKNLR C DCH AIK IS I GREITV
Sbjct: 736 DKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITV 795
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD+ RFH F+DG CSCGDYW
Sbjct: 796 RDSNRFHHFRDGSCSCGDYW 815
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 249/502 (49%), Gaps = 28/502 (5%)
Query: 3 RQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
RQ L+TC+ R + TG P ++ N I S+ G L A +Q +
Sbjct: 23 RQTLQTCIDARIVKTG----------FDPITSRF-NFMIKDLSERGQLCQARQLLDQMPN 71
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N FS +++++ Y + + AR++FD + +V++ T+I AY+ A LF +M
Sbjct: 72 RNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEM 131
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQL---HCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D T L+T N+L + K+L H + G V N+LL Y + G
Sbjct: 132 HRSGSQPDYVTYITLLTG-CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGG 190
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD A+R+F EM D VS+N M+ Y + EA++LF EM +L +T A++++
Sbjct: 191 LDSARRLFLEMCGW-DSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVIS 249
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK--CSGDMRDCMKVFEEIPQPD 297
A L+D G Q H ++K+ F +N +G+ +D Y+K C ++R K+F E+P+ D
Sbjct: 250 ASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVR---KLFNEMPELD 306
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS-ACSNLSPSLGKQIH 356
V +N +I+ Y+ + +++ F++L + + F ++S A S+L +G+Q+H
Sbjct: 307 GVSYNVIITAYAWVGKVK-ESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLH 365
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A + + + V+N+LV MY+KCG E+A R+F R+ +TV +MI+ Q G+
Sbjct: 366 AQVV-VSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH 424
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYS 475
L+LF M N+ TF VL A A+ + G++ S +++ F G
Sbjct: 425 ENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSG---C 481
Query: 476 CMIDLLGRAGKLTDAERLIEAM 497
++D+ + DA + E M
Sbjct: 482 ALLDMYANCASIKDAIKTFEEM 503
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/751 (33%), Positives = 393/751 (52%), Gaps = 109/751 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+ C +L G +HA + N V +L + + +Y + GC
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC------------ 60
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ AR++FD++ + ++ S+ ++ Y GD E + LF
Sbjct: 61 -------------------VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 101
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D F + A S N + K ++ + GF+ + V S+L + + G
Sbjct: 102 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 161
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D A+R F E+ E KD WN MV Y E +AL +F++MV + + T+AS ++
Sbjct: 162 MDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVS 220
Query: 240 AFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCS------------------ 280
A T+L L G + H + IK + +G+ L+D YAKC
Sbjct: 221 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 280
Query: 281 --------------GDMRDCMK----------VFEEIPQPDLVLWNTMISGYSQKEEYSD 316
GD + ++ VF E+ D+V+WN++IS +Q S
Sbjct: 281 SWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGR-SV 339
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
AL +++N + + V + ACS L+ GK+IH I+ + + + N+L
Sbjct: 340 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF-ILNSL 398
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+ MY +CG+++ +RR+FD MP+ + VS N MI+ Y HG GM+A+ LF+ + P +
Sbjct: 399 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 458
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
ITF ++LSAC+H+G + EG KYF MMK + +P E Y+CM+DLL RAG+ + IE
Sbjct: 459 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 518
Query: 496 AMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
MPF P + +A AA + +LEP ++ YV++ANIY+A+G+WE+
Sbjct: 519 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 578
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
A IR LM++RGV K PG SWIEVK+++H FV D SHP++++I +E + +K+ GY
Sbjct: 579 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 638
Query: 599 VPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
VPD KE L HSEK+A+AFGL+ST+ G P+ ++KNLR+CGDCH+A KF
Sbjct: 639 VPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKF 698
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + R+I +RD YRFH F DG CSCGDYW
Sbjct: 699 ISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 331 HPDDCS--FVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISV----NNALVAMYSKCG 383
+PD+C + ++ C L + LG Q+HA ++ N + V + L+ +Y + G
Sbjct: 5 NPDECIEIYASILQKCRKLYNLRLGFQVHA-----QLVVNGVDVCEFLGSRLLEVYCQTG 59
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+EDARR+FD+M E N S +++ Y G E ++LF M+ + P + F V
Sbjct: 60 CVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 119
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
AC+ G+ + M + GFE ++D+ + G++ A R E + F
Sbjct: 120 ACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 174
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C L GK +H ++ + ++ N I +Y +CG + + F+
Sbjct: 359 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM 418
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
++ S+NV+++ Y A LF Q +P+ +++ L+SA + G E
Sbjct: 419 PQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGW 478
Query: 117 SLFKDMR 123
FK M+
Sbjct: 479 KYFKMMK 485
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/711 (35%), Positives = 386/711 (54%), Gaps = 69/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G D+ G ++H L +K + ++N I +YSKC LS
Sbjct: 206 TLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLS--------- 256
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A+ LFD+ + ++VS+N++I YA D L +
Sbjct: 257 ----------------------EAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQ 294
Query: 121 DMR--EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M+ + + D FT+ ++ + L +K+LH + G V N+ + Y+R
Sbjct: 295 KMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTR 354
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L ++RVF ++ + K SWN+++ Y Q+ + +AL L+ +M L D +T+ S
Sbjct: 355 CGALCSSERVF-DLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGS 413
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A + ++ L G + H +++G + IG L+ LY C G +F+ +
Sbjct: 414 LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYI-CCGKPFAAQVLFDGMEHR 472
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
LV WN MI+GYSQ D+A+ F+++ G P + + +CV ACS LS LGK++
Sbjct: 473 SLVSWNVMIAGYSQNG-LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 531
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K + + I V+++++ MY+K G + ++R+FDR+ E + S N +IAGY HG
Sbjct: 532 HCFALKAHLTED-IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGR 590
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EAL LFE ML + P + TF +L AC+H G V +G +YF+ M ++ EP+ EHY+
Sbjct: 591 GKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT 650
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPS 518
C++D+LGRAG++ DA RLIE MP +P G++ L K AN L+LEP
Sbjct: 651 CVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE 710
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
YV+++N++A SGKW++V +R M+D G+QK G SWIEV ++H F+ D P
Sbjct: 711 KPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPE 770
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
++E+ + K+ GY P DK L HSEKLA++FGLL+T+ G
Sbjct: 771 LEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGL 830
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V KNLRICGDCHNA KFIS + R+I VRD RFH F+DG CSCGDYW
Sbjct: 831 PVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 242/511 (47%), Gaps = 57/511 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T V+K C G DL G+ +H + K +LV
Sbjct: 103 TLPCVIKACAGLLDLGLGQIIHGMATKMDLV----------------------------- 133
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
++VF N L+A Y + + A ++F+ +P+ +LVS+N++I +++ G + + + F
Sbjct: 134 ---SDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAF 190
Query: 120 KDM--REKRFDTDGFTLSGLITASSNNLCLIKQL--HCLAIYCGFDHYASVNNSLLTCYS 175
++M E+ F D TL ++ + + K + H LA+ G + VNNSL+ YS
Sbjct: 191 REMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYS 250
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQLGLDMYT 233
+ FL EA+ +F + + K+ VSWNSM+ Y + + L Q+M + ++ D +T
Sbjct: 251 KCRFLSEAQLLF-DKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFT 309
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ ++L +L + H + + G N + + I Y +C G + +VF+ +
Sbjct: 310 ILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRC-GALCSSERVFDLM 368
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
+ WN ++ GY+Q + +AL + ++ G PD + ++ ACS + S G
Sbjct: 369 DTKTVSSWNALLCGYAQNSD-PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 427
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
++IH ++ + + + +L+++Y CG A+ LFD M + VS N MIAGY+Q
Sbjct: 428 EEIHGFALRNGLAVDPF-IGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQ 486
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS------MMKDMFG 466
+G+ EA+ LF ML I P I + V AC+ + G++ + +D+F
Sbjct: 487 NGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF- 545
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S +ID+ + G + ++R+ + +
Sbjct: 546 ------VSSSIIDMYAKGGCIGLSQRIFDRL 570
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 168/338 (49%), Gaps = 11/338 (3%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+N ++T YS G +++ VF ++ K+ WN++V AY ++ +A+ +F E++S+
Sbjct: 36 LNTRIITMYSMCGSPSDSRMVFDKLRR-KNLFQWNAIVSAYTRNELFEDAMSIFSELISV 94
Query: 226 -QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ D +TL ++ A L DL G H K + +G+ LI +Y KC G +
Sbjct: 95 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC-GLVE 153
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVIS 342
+ +KVFE +P+ +LV WN++I G+S+ + ++ F+++ + PD + V V+
Sbjct: 154 EAVKVFEHMPERNLVSWNSIICGFSENG-FLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
C+ G +H L +K+ + + + VNN+L+ MYSKC L +A+ LFD+ + N V
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGL-NEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIV 271
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
S NSMI GYA+ L + M + + T ++VL C ++ + K
Sbjct: 272 SWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSEL-QSLKELH 330
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + + I R G L +ER+ + M
Sbjct: 331 GYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLM 368
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+ +L A +D+ G + H + S F + + + +I +Y+ C G D VF++
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMC-GSPSDSRMVFDK 59
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH-PDDCSFVCVISACSNL-SPS 350
+ + +L WN ++S Y++ E + D A+ F +L V H PD+ + CVI AC+ L
Sbjct: 60 LRRKNLFQWNAIVSAYTRNELFED-AMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLG 118
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LG+ IH + K+++ S+ + V NAL+AMY KCG +E+A ++F+ MPE N VS NS+I G+
Sbjct: 119 LGQIIHGMATKMDLVSD-VFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGF 177
Query: 411 AQHGIGMEALRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
+++G E+ F ML E + P T V+VL CA + +G + + G
Sbjct: 178 SENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKL-GLN 236
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIE 495
E + +ID+ + L++A+ L +
Sbjct: 237 EELMVNNSLIDMYSKCRFLSEAQLLFD 263
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/710 (35%), Positives = 390/710 (54%), Gaps = 69/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C L GK LHAL L++ +L + +YSKCG
Sbjct: 53 TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGT----------- 101
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A ++F +I PD+V+++ +I+ G + A LF
Sbjct: 102 --------------------VYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFH 141
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLH-CLAIYCGFDHYASVNNSLLTCYSRN 177
MR K + FTLS L++ ++N +L + +H C+ Y GF+ V+N L+ Y ++
Sbjct: 142 LMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKY-GFESDNLVSNPLIMMYMKS 200
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+++ +VF M D VSWN+++ + + ++F +M+ +M+T S+
Sbjct: 201 RCVEDGNKVFEAMTN-PDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISV 259
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + +SL D G Q HAH+IK+ + +G+ L+D+YAK + D F+ + D
Sbjct: 260 LRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC-LEDAGVAFDRLVNRD 318
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+ W +ISGY+Q ++ +++A+ F+++ R G P++ + +S CS+++ G+Q+H
Sbjct: 319 IFSWTVIISGYAQTDQ-AEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLH 377
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A+ +K I V +ALV +Y KCG +E A +F + + VS N++I+GY+QHG G
Sbjct: 378 AVAVKAG-HFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQG 436
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+AL F ML I P TF+ VLSAC+ G V EG+K F M ++G P EHY+C
Sbjct: 437 EKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYAC 496
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSN 519
M+D+LGRAGK + + IE M P S+ KAA ++EP
Sbjct: 497 MVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMM 556
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
Y++L+NI+A+ G+W++V IR LM RG++K+PG SW+EV Q+HVF+++DGSHP I
Sbjct: 557 DSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKI 616
Query: 580 KEIHNYLEEMSRKMKQAGYVP----------DKEK--RLVHHSEKLAVAFGLLSTSYGEP 627
+EI+ L+++ + + GYVP +KEK L +HSE+LA++F LLST+ +P
Sbjct: 617 REIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKP 676
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLRIC DCH+ +K IS I +EI VRD RFH FK G CSC D W
Sbjct: 677 IRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 233/477 (48%), Gaps = 38/477 (7%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +LF +P+ + VS+N L++ YA GD + L LF M+E FTLS ++ +N
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L K LH LA+ G + + SL+ YS+ G + +A +VF ++ D V+W++
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN-PDVVAWSA 122
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Q G EA +LF M + +TL+S+++ T++ DL G H + K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG- 320
F ++ + + LI +Y K S + D KVFE + PDLV WN ++SG+ Y Q G
Sbjct: 183 FESDNLVSNPLIMMYMK-SRCVEDGNKVFEAMTNPDLVSWNALLSGF-----YDSQTCGR 236
Query: 321 ---CFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALV 376
F ++ G+ P+ +F+ V+ +CS+ L P GKQ+HA IK + V ALV
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDF-VGTALV 295
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
MY+K LEDA FDR+ + S +I+GYAQ +A++ F M I P
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEY 355
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY--SCMIDLLGRAGKLTDAERLI 494
T S LS C+H + G++ ++ F G+ + S ++DL G+ G + AE +
Sbjct: 356 TLASCLSGCSHMATLENGRQLHAVAVKAGHF---GDIFVGSALVDLYGKCGCMEHAEAI- 411
Query: 495 EAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
F L + V + + + Y+ G+ E+ R+M G+
Sbjct: 412 -----------------FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 144/268 (53%), Gaps = 5/268 (1%)
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A+R+F+ M E K+ VSWN+++ Y Q +G + L+LF +M + +TL+++L
Sbjct: 1 MELAERLFFGMPE-KNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLK 59
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ L G HA ++SG + +G L+D+Y+KC G + D +KVF +I PD+V
Sbjct: 60 GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKC-GTVYDALKVFTKIRNPDVV 118
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W+ MI+G Q + + +A F + R G P+ + ++S +N+ G+ IH
Sbjct: 119 AWSAMITGLDQ-QGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGC 177
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
K S+ + V+N L+ MY K +ED ++F+ M + VS N++++G+
Sbjct: 178 ICKYGFESDNL-VSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACA 446
R+F ML P TF+SVL +C+
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCS 264
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E A RLF MPE N VS N+++ GYAQ G G + L+LF M E + T +VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC-MIDLLGRAGKLTDAERLIEAMPFNPGS 503
CA+TG + EG K + G E + E C ++D+ + G + DA ++
Sbjct: 61 CANTGSLREG-KVLHALALRSGCEID-EFLGCSLVDMYSKCGTVYDALKV---------- 108
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
F ++ + V + + G +E A + LMR +G +
Sbjct: 109 --------FTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGAR 149
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/691 (37%), Positives = 370/691 (53%), Gaps = 78/691 (11%)
Query: 40 FILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR--------------------QL 79
+ Y+ CG L F+ + NV+ +N +++ YA+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
R SA +LFD++ D++S+N++IS Y G TE L ++K M D D T+ ++
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 140 --ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A S L L K +H LAI F+ + +N+LL YS+ G LD A RVF +MGE ++ V
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVV 180
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
SW SM+ Y + A+ L Q+M + LD+ + SIL A L G H ++
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+ N + + L+D+YAKC G M VF + D++ WNTM+
Sbjct: 241 KANNMASNLFVCNALMDMYAKC-GSMEGANSVFSTMVVKDIISWNTMV------------ 287
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
G K PD + C++ AC++LS GK+IH ++ S+R V NALV
Sbjct: 288 --GELK--------PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR-HVANALV 336
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+Y KCG L AR LFD +P + VS MIAGY HG G EA+ F M + I P +
Sbjct: 337 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 396
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
+F+S+L AC+H+G + +G ++F +MK+ F EP+ EHY+CM+DLL R G L+ A + IE
Sbjct: 397 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET 456
Query: 497 MPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
+P P + +A K A +LEP N YV+LANIYA + KWEEV
Sbjct: 457 LPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 516
Query: 540 ATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA-EDGSHPMIKEIHNYLEEMSRKMKQAGY 598
+R + +G++K PG SWIE+K ++++FV+ + SHP K+I + L++M RKMK+ GY
Sbjct: 517 KRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGY 576
Query: 599 VP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
P KE L HSEKLA+AFGLL+ + I V KNLR+CGDCH KF
Sbjct: 577 FPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKF 636
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+S REI +RD+ RFH FKDG CSC +W
Sbjct: 637 MSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 57/361 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK++H+L +K+ SN + +YSKCG L A F +
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 61 QHANVFSFNVLLAAY-----------------------------------ARQLRIASAR 85
NV S+ ++A Y AR + + +
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 86 QLFDQIPQPDLVSY----NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
+ D I ++ S N L+ YA CG E A S+F M K + + L S
Sbjct: 235 DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDS 294
Query: 142 SNNLCLI------------KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
C++ K++H + G+ V N+L+ Y + G L A R+ ++
Sbjct: 295 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA-RLLFD 353
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M KD VSW M+ YG H G EA+ F EM + D + SIL A + L
Sbjct: 354 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 413
Query: 250 GLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
G +F +++K+ F+ + + ++DL ++ +G++ K E +P PD +W ++
Sbjct: 414 GWRFF-YIMKNDFNIEPKLEHYACMVDLLSR-TGNLSKAYKFIETLPIAPDATIWGALLC 471
Query: 307 G 307
G
Sbjct: 472 G 472
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/709 (35%), Positives = 381/709 (53%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C R DL TG+++HA + A + +Y+KC
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKC------------- 107
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R A AR++FD++P D V++N L++ YA G A+ +
Sbjct: 108 ------------------RRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVV 149
Query: 121 DMREKRFD-TDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+E+ + D TL ++ A++ L ++ H AI G + +V ++L Y +
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A RV ++ K+ VSWN+M+ Y Q+ + EAL LF MV + + ++ +
Sbjct: 210 GDI-RAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A L L G++ H L++ G N + + LI +Y+KC + VF+E+ +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK-RVDLASHVFDELDRRT 327
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
V WN MI G +Q S+ A+ F ++ PD + V VI A +++S P + IH
Sbjct: 328 QVSWNAMILGCAQNG-CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+I++ + + + V AL+ MY+KCG + AR LF+ E + ++ N+MI GY HG G
Sbjct: 387 GYSIRLHLDQD-VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
A+ LFE M I P TF+SVLSAC+H G V EG++YF+ MK+ +G EP EHY
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
M+DLLGRAGKL +A I+ MP +PG +A ++A +L P
Sbjct: 506 MVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQE 565
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
V +V+LANIYA + W++VA +R M G+QK PG+S I++K ++H F + +H
Sbjct: 566 GVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQA 625
Query: 580 KEIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
KEI++ L ++ ++K GYVPD K + L HSEKLA+AFGL+ T+ G I
Sbjct: 626 KEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTI 685
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+C DCHNA K IS + GREI +RD RFH FKDG+CSCGDYW
Sbjct: 686 QIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL F M S + T S+L + DL G HA L G + + L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+YAKC D +VF+ +P D V WN +++GY++ + G PD
Sbjct: 103 MYAKCRRPA-DARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161
Query: 335 CSFVCVI-SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ V V+ + + + + ++ HA I+ + ++V A++ Y KCG++ AR +FD
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGL-EELVNVATAILDAYCKCGDIRAARVVFD 220
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
MP N+VS N+MI GYAQ+G EAL LF M+E + T+++ ++ L AC G + E
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 454 GQKYFSMM 461
G + ++
Sbjct: 281 GMRVHELL 288
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/709 (35%), Positives = 381/709 (53%), Gaps = 67/709 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C R DL TG+++HA + A + +Y+KC
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKC------------- 107
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R A AR++FD++P D V++N L++ YA G A+ +
Sbjct: 108 ------------------RRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVV 149
Query: 121 DMREKRFD-TDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+E+ + D TL ++ A++ L ++ H AI G + +V ++L Y +
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A RV ++ K+ VSWN+M+ Y Q+ + EAL LF MV + + ++ +
Sbjct: 210 GDI-RAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A L L G++ H L++ G N + + LI +Y+KC + VF+E+ +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK-RVDLASHVFDELDRRT 327
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
V WN MI G +Q S+ A+ F ++ PD + V VI A +++S P + IH
Sbjct: 328 QVSWNAMILGCAQNG-CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIH 386
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+I++ + + + V AL+ MY+KCG + AR LF+ E + ++ N+MI GY HG G
Sbjct: 387 GYSIRLHLDQD-VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
A+ LFE M I P TF+SVLSAC+H G V EG++YF+ MK+ +G EP EHY
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
M+DLLGRAGKL +A I+ MP +PG +A ++A +L P
Sbjct: 506 MVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQE 565
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
V +V+LANIYA + W++VA +R M G+QK PG+S I++K ++H F + +H
Sbjct: 566 GVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQA 625
Query: 580 KEIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
KEI++ L ++ ++K GYVPD K + L HSEKLA+AFGL+ T+ G I
Sbjct: 626 KEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTI 685
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+C DCHNA K IS + GREI +RD RFH FKDG+CSCGDYW
Sbjct: 686 QIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL F M S + T S+L + DL G HA L G + + L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+YAKC D +VF+ +P D V WN +++GY++ + G PD
Sbjct: 103 MYAKCRRPA-DARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161
Query: 335 CSFVCVI-SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ V V+ + + + + ++ HA I+ + ++V A++ Y KCG++ AR +FD
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGL-EELVNVATAILDAYCKCGDIRAARVVFD 220
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
MP N+VS N+MI GYAQ+G EAL LF M+E + T+++ ++ L AC G + E
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 454 GQKYFSMM 461
G + ++
Sbjct: 281 GMRVHELL 288
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/644 (38%), Positives = 371/644 (57%), Gaps = 41/644 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y + R+ SAR++FD++ + D++S+N++I+ Y G E LS+F M +
Sbjct: 83 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 142
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T+ + A S + L + +H + + F N+LL YS+ G LD AK V
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F EM + + VS+ SM+ Y REGL EA++LF+EM + D+YT+ ++L
Sbjct: 203 FREMSD-RSVVSYTSMIAGYA--REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 259
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G + H + ++ + + + L+D+YAKC G M++ VF E+ D++ WNT+
Sbjct: 260 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC-GSMQEAELVFSEMRVKDIISWNTI 318
Query: 305 ISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
I GYS K Y+++AL F L + PD+ + CV+ AC++LS G++IH ++
Sbjct: 319 IGGYS-KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 377
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S+R V N+LV MY+KCG L A LFD + + VS MIAGY HG G EA+ L
Sbjct: 378 GYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 436
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F M + I I+FVS+L AC+H+G V EG ++F++M+ EP EHY+C++D+L
Sbjct: 437 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 496
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
R G L A R IE MP P + +A K A +LEP N YV+
Sbjct: 497 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 556
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
+ANIYA + KWE+V +R+ + RG++K PG SWIE+K ++++FVA D S+P + I +
Sbjct: 557 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 616
Query: 586 LEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L ++ +M + GY P +KE+ L HSEKLA+A G++S+ +G+ I V KN
Sbjct: 617 LRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 676
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH KF+S + REI +RD+ RFH FKDG CSC +W
Sbjct: 677 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 230/471 (48%), Gaps = 31/471 (6%)
Query: 88 FDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCL 147
FD++ + +N L++ A GD ++ LFK M + D +T S ++ S ++L
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS-CVSKSFSSLRS 59
Query: 148 I---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+ +QLH + GF SV NSL+ Y +N +D A++VF EM E +D +SWNS++
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE-RDVISWNSIIN 118
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y + + L +F +M+ + +D+ T+ S+ + G H+ +K+ F +
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ L+D+Y+KC GD+ VF E+ +V + +MI+GY+ +E + +A+ F++
Sbjct: 179 EDRFCNTLLDMYSKC-GDLDSAKAVFREMSDRSVVSYTSMIAGYA-REGLAGEAVKLFEE 236
Query: 325 LNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G PD + V++ C+ GK++H IK I V+NAL+ MY+KCG
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCG 295
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVL 442
++++A +F M + +S N++I GY+++ EAL LF +L E P T VL
Sbjct: 296 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 355
Query: 443 SACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
ACA +G++ +M++ G+ + + ++D+ + G L A L
Sbjct: 356 PACASLSAFDKGREIHGYIMRN--GYFSDRHVANSLVDMYAKCGALLLAHML-------- 405
Query: 502 GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
F + + V + ++ Y G +E + MR G++
Sbjct: 406 ----------FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 46/316 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R L GK +H +N + F ++SN + +Y+KCG + A F++
Sbjct: 248 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 307
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ S+N ++ Y++ + YA+ ALSLF
Sbjct: 308 RVKDIISWNTIIGGYSK--------------------------NCYAN-----EALSLFN 336
Query: 121 -DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ EKRF D T++ ++ A ++ K ++H + G+ V NSL+ Y++
Sbjct: 337 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 396
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A +F ++ KD VSW M+ YG H G EA+ LF +M + D + S+
Sbjct: 397 GALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 455
Query: 238 LTAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L A + + G +F H I+ + I +D+ A+ +GD+ + E
Sbjct: 456 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI----VDMLAR-TGDLIKAYRFIEN 510
Query: 293 IP-QPDLVLWNTMISG 307
+P PD +W ++ G
Sbjct: 511 MPIPPDATIWGALLCG 526
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/644 (38%), Positives = 371/644 (57%), Gaps = 41/644 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y + R+ SAR++FD++ + D++S+N++I+ Y G E LS+F M +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T+ + A S + L + +H + + F N+LL YS+ G LD AK V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F EM + + VS+ SM+ Y REGL EA++LF+EM + D+YT+ ++L
Sbjct: 354 FREMSD-RSVVSYTSMIAGYA--REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G + H + ++ + + + L+D+YAKC G M++ VF E+ D++ WNT+
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC-GSMQEAELVFSEMRVKDIISWNTI 469
Query: 305 ISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
I GYS K Y+++AL F L + PD+ + CV+ AC++LS G++IH ++
Sbjct: 470 IGGYS-KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S+R V N+LV MY+KCG L A LFD + + VS MIAGY HG G EA+ L
Sbjct: 529 GYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F M + I I+FVS+L AC+H+G V EG ++F++M+ EP EHY+C++D+L
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
R G L A R IE MP P + +A K A +LEP N YV+
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 707
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
+ANIYA + KWE+V +R+ + RG++K PG SWIE+K ++++FVA D S+P + I +
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 767
Query: 586 LEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L ++ +M + GY P +KE+ L HSEKLA+A G++S+ +G+ I V KN
Sbjct: 768 LRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 827
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH KF+S + REI +RD+ RFH FKDG CSC +W
Sbjct: 828 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 252/558 (45%), Gaps = 62/558 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C + L GK + N + L + L+Y+ CG L A F
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF--- 152
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
D++ + +N L++ A GD ++ LFK
Sbjct: 153 ----------------------------DEVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + D +T S ++ S ++L + +QLH + GF SV NSL+ Y +N
Sbjct: 185 KMMSSGVEMDSYTFS-CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+D A++VF EM E +D +SWNS++ Y + + L +F +M+ + +D+ T+ S+
Sbjct: 244 QRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ G H+ +K+ F + + L+D+Y+KC GD+ VF E+
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC-GDLDSAKAVFREMSDRS 361
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
+V + +MI+GY+ +E + +A+ F+++ G PD + V++ C+ GK++H
Sbjct: 362 VVSYTSMIAGYA-REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
IK I V+NAL+ MY+KCG++++A +F M + +S N++I GY+++
Sbjct: 421 EW-IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 417 MEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHY 474
EAL LF +L E P T VL ACA +G++ +M++ G+ +
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN--GYFSDRHVA 537
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ ++D+ + G L A L F + + V + ++ Y G
Sbjct: 538 NSLVDMYAKCGALLLAHML------------------FDDIASKDLVSWTVMIAGYGMHG 579
Query: 535 KWEEVATIRRLMRDRGVQ 552
+E + MR G++
Sbjct: 580 FGKEAIALFNQMRQAGIE 597
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 218/403 (54%), Gaps = 14/403 (3%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY 157
NT + + + G+ E+A+ L ++D D TL ++ A S +L K++
Sbjct: 65 NTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
GF +++ + L Y+ G L EA RVF E+ +I+ + WN ++ + + ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV-KIEKALFWNILMNELAKSGDFSGSIG 181
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF++M+S + +D YT + + +F+SL + GG Q H ++KSGF + + +G+ L+ Y
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
K + + KVF+E+ + D++ WN++I+GY +++ L F ++ G D +
Sbjct: 242 K-NQRVDSARKVFDEMTERDVISWNSIINGYVSN-GLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 338 VCVISACSNLS-PSLGKQIHALTIKIEI-RSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V V + C++ SLG+ +H++ +K R +R N L+ MYSKCG+L+ A+ +F M
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC--NTLLDMYSKCGDLDSAKAVFREM 357
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ + VS SMIAGYA+ G+ EA++LFE M E I P T +VL+ CA + EG+
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 456 KYFSMMKDM-FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +K+ GF+ + ++D+ + G + +AE + M
Sbjct: 418 RVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEM 458
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 23/330 (6%)
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
VS + +D TL S+L + L G + + +GF +S++GS L +Y C GD
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNC-GD 144
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+++ +VF+E+ + WN +++ ++ ++S ++G FKK+ G D +F CV
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSG-SIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+ S+L S G+Q+H +K R SV N+LVA Y K ++ AR++FD M E + +
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S NS+I GY +G+ + L +F ML + I T VSV + CA + ++ G+ S+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAV 521
F E + ++D+ + G L A+ + F ++ + V
Sbjct: 323 VKAC-FSREDRFCNTLLDMYSKCGDLDSAKAV------------------FREMSDRSVV 363
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGV 551
Y + YA G E + M + G+
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 46/316 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R L GK +H +N + F ++SN + +Y+KCG + A F++
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ S+N ++ Y++ + YA+ ALSLF
Sbjct: 459 RVKDIISWNTIIGGYSK--------------------------NCYAN-----EALSLFN 487
Query: 121 -DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ EKRF D T++ ++ A ++ K ++H + G+ V NSL+ Y++
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A +F ++ KD VSW M+ YG H G EA+ LF +M + D + S+
Sbjct: 548 GALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 238 LTAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L A + + G +F H I+ + I +D+ A+ +GD+ + E
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI----VDMLAR-TGDLIKAYRFIEN 661
Query: 293 IP-QPDLVLWNTMISG 307
+P PD +W ++ G
Sbjct: 662 MPIPPDATIWGALLCG 677
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 313/516 (60%), Gaps = 62/516 (12%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
MV + + +TL++++ A S+ L G Q H ++IK GF + + + L+ +YA+C
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 282 ------------------------------DMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
DM+ +K+F E+ + D+V W +I+GY+Q
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
Y D++L F ++ + G D V+SAC++L+ LG+Q HA ++ + I
Sbjct: 121 G-YGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD-IV 178
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V +ALV MY+K G++EDA ++FD+MP+ N VS NS+I G AQHG G +A+ LFE ML+
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P I+FV VLSAC+HTG V EG+ YF++M +G P+ HY+CMIDLLGRAG L +A
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEA 298
Query: 491 ERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
E I MP P +A + A H L +E A YV+L+NIYAA+
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
G+W++ A +R+LM+DRGV K+PG+SWIEVK MH FVA + SHP +KEIH +LE +SRKM
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKM 418
Query: 594 KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K AGYVP +KE L HHSEKLA+AFG+++T+ G I V KNLR+CGDCH
Sbjct: 419 KAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCH 478
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IKFIS R+I VRD RFH FKDGRCSCGDYW
Sbjct: 479 TVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 159/310 (51%), Gaps = 8/310 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+K C L GK H +K + + +Y++CG L A H F++
Sbjct: 12 TLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKM 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++N ++ +A+ + A +LF ++ + D+VS+ +I+ YA G + +L++F
Sbjct: 72 SERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFN 131
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR+ +D F + +++A ++ L L +Q H + GF V ++L+ Y+++G
Sbjct: 132 QMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSG 191
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A +VF +M + ++EVSWNS++ QH G +A+ LF++M+ + + + +L
Sbjct: 192 SMEDACQVFDKMPQ-RNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVL 250
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S LV + + +L+ + + + +IDL + +G + + +P +
Sbjct: 251 SA-CSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGR-AGCLDEAENFINGMPVE 308
Query: 296 PDLVLWNTMI 305
PD+ +W ++
Sbjct: 309 PDVSVWGALL 318
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/712 (35%), Positives = 384/712 (53%), Gaps = 78/712 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFIL------LYSKCGCLSAAHHAFN 58
+L+ C R+D+ G+ LH +V S N F+L +YS CG S
Sbjct: 111 LLQACGQRKDIEVGRRLH-----EMVSASTQFCNDFVLNTRIITMYSMCGSPS------- 158
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+R +FD++ + +L +N ++SAY E A+S+
Sbjct: 159 ------------------------DSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSI 194
Query: 119 FKDMRE-KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F ++ D FTL +I A + +L L + +H +A V N+L+ Y
Sbjct: 195 FSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYG 254
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G ++EA + +++ + K SWN+++ Y Q+ + +AL L+ +M L D +T+
Sbjct: 255 KCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 314
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L A + ++ L G + H +++G + IG L+ LY C G +F+ +
Sbjct: 315 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYI-CCGKPFAAQVLFDGMEH 373
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
LV WN MI+GYSQ D+A+ F+++ G P + + +CV ACS LS LGK+
Sbjct: 374 RSLVSWNVMIAGYSQNG-LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE 432
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K + + I V+++++ MY+K G + ++R+FDR+ E + S N +IAGY HG
Sbjct: 433 LHCFALKAHLTED-IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG 491
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G EAL LFE ML + P + TF +L AC+H G V +G +YF+ M ++ EP+ EHY
Sbjct: 492 RGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY 551
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
+C++D+LGRAG++ DA RLIE MP +P S + K AN L+LEP
Sbjct: 552 TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEP 611
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
YV+++N++A SGKW++V +R M+D G+QK G SWIEV ++H F+ D P
Sbjct: 612 EKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLP 671
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
++E+ + K+ GY P DK L HSEKLA++FGLL+T+ G
Sbjct: 672 ELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKG 731
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V KNLRICGDCHNA KFIS + R+I VRD RFH F+DG CSCGDYW
Sbjct: 732 LPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 14/276 (5%)
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
R F + EIK + G +E L+ LQ + V L + +L A
Sbjct: 66 RQFSSLHEIKK-------LCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQR 118
Query: 245 EDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+D+ G + H + S F + + + +I +Y+ C G D VF+++ + +L WN
Sbjct: 119 KDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMC-GSPSDSRMVFDKLRRKNLFQWNA 177
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYH-PDDCSFVCVISACSN-LSPSLGKQIHALTIK 361
++S Y++ E + D A+ F +L V H PD+ + CVI AC+ L LG+ IH + K
Sbjct: 178 IVSAYTRNELFED-AMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATK 236
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDA-RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+++ S+ + V NAL+AMY KCG +E+A +R+FD M S N+++ GYAQ+ +AL
Sbjct: 237 MDLVSD-VFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 295
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
L+ M ++ + P T S+L AC+ + G++
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 331
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 33/308 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C + L G+ +H L+N + ++ + LY CG AA F+
Sbjct: 312 TIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM 371
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+H ++ S+NV++A Y++ A LF Q+ + Y I+ CG A S
Sbjct: 372 EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE--IAIMCVCG----ACSQLS 425
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+R L K+LHC A+ V++S++ Y++ G +
Sbjct: 426 ALR-----------------------LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCI 462
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++R+F + E KD SWN ++ YG H G EAL+LF++M+ L L D +T IL A
Sbjct: 463 GLSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 521
Query: 241 FTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
+ + GL++ ++ + ++D+ + +G + D +++ EE+P PD
Sbjct: 522 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGR-AGRIDDALRLIEEMPGDPDS 580
Query: 299 VLWNTMIS 306
+W++++S
Sbjct: 581 RIWSSLLS 588
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/774 (34%), Positives = 417/774 (53%), Gaps = 118/774 (15%)
Query: 12 RRDLVTGKSLHALYLKNLVPFS----AYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFS 67
R L +++H N++ F A++ N I +Y K L+ A F++ + +
Sbjct: 27 RTSLQLARAVHG----NIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIA 82
Query: 68 FNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+++ Y I AR +F++ P D V YN +I+ ++ D SA++LF M+ +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 126 RFDTDGFT----LSGL-ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---- 176
F D FT L+GL + A C+ Q H A+ G + SV+N+L++ YS+
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCV--QFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR---------EGL-------------- 213
L A++VF E+ E KDE SW +M+ Y ++ EG+
Sbjct: 201 PSLLHSARKVFDEILE-KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 214 ---------EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
EAL++ + MVS + LD +T S++ A + L G Q HA++++
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DF 318
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY--------------SQ 310
+ H + L+ LY KC G + +FE++P DLV WN ++SGY
Sbjct: 319 SFHFDNSLVSLYYKC-GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 311 KEE----------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GK 353
KE+ + ++ L F + R G+ P D +F I +C+ L G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q HA +KI S+ +S NAL+ MY+KCG +E+AR++F MP ++VS N++IA QH
Sbjct: 438 QYHAQLLKIGFDSS-LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G EA+ ++E ML+ I P IT ++VL+AC+H G V +G+KYF M+ ++ P +H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y+ +IDLL R+GK +DAE +IE++PF P + + + AA+ L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + Y++L+N++AA+G+WEEVA +R+LMRDRGV+K+ SWIE++ Q+H F+ +D SH
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTS 623
P + ++ YL+++ ++M++ GYVPD KE L HSEK+AVAFGL+
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KNLR CGDCHN +F+S + R+I +RD RFH F++G CSCG++W
Sbjct: 737 PGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 29/322 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V++ C L GK +HA L+ FS + N + LY KCG A F +
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N LL+ Y I A+ +F ++ + +++S+ +IS A+ G E L LF
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + F+ + SG I + + C +Q H + GFD S N+L+T Y++ G
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA++VF M + D VSWN+++ A GQH G EA+ +++EM+ + D TL ++L
Sbjct: 467 VVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG------FHQNSHIGSG------LIDLYAKCSGDMRDC 286
TA + HA L+ G I G LIDL + SG D
Sbjct: 526 TACS-----------HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCR-SGKFSDA 573
Query: 287 MKVFEEIP-QPDLVLWNTMISG 307
V E +P +P +W ++SG
Sbjct: 574 ESVIESLPFKPTAEIWEALLSG 595
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/645 (38%), Positives = 361/645 (55%), Gaps = 35/645 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+F+ ++ YA+ +I A +FD++P+ DLV +NT+IS YA G + AL L M
Sbjct: 64 NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMS 123
Query: 124 EKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
E+ D T+ ++ A ++ L + +H + GF+ +V+ +L+ YS+ G +
Sbjct: 124 EEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVS 183
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+ +F M + VSWNSM+ Y Q + A+ +FQ+M+ + T+ L A
Sbjct: 184 IARVIFDGMDH-RTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC 242
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L DL G H + + + + + LI +Y+KC + +F+ + LV W
Sbjct: 243 ADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCK-RVDIAADIFKNLRNKTLVSW 301
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
N MI GY+Q ++AL F ++ PD + V VI A + LS P K IH L I
Sbjct: 302 NAMILGYAQ-NGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + N + V ALV MY+KCG + AR+LFD M + ++ N+MI GY HG+G ++
Sbjct: 361 RRFLDKN-VFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+ M + I P +ITF+ LSAC+H+G V EG +F MK +G EP +HY M+DL
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479
Query: 481 LGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPY 523
LGRAG+L A I+ MP PG + KAA +L P + +
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYH 539
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+LANIYA + W +VA +R +M G+QK PG S +E+ ++H F + SHP K+I+
Sbjct: 540 VLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIY 599
Query: 584 NYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
+YLE + +++ AGYVPD K + L HSEKLA+AFGLL+TS G PI + K
Sbjct: 600 SYLETLVDEIRAAGYVPDTNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRK 659
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCHNA K+IS + GREI VRD +RFH FKDG CSCGDYW
Sbjct: 660 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 196/399 (49%), Gaps = 8/399 (2%)
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCG 159
++ YA +SALS F M+ + + L+ +N L K++H I G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
F ++ Y++ +++A +F M E +D V WN+M+ Y Q+ AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPE-RDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
M D T+ SIL A L G+ H +++++GF ++ + L+D+Y+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + +F+ + +V WN+MI GY Q + ++ A+ F+K+ G P + + +
Sbjct: 180 -GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGD-AEGAMLIFQKMLDEGVQPTNVTVMG 237
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+ AC++L GK +H L ++++ S+ +SV N+L++MYSKC ++ A +F +
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSD-VSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
VS N+MI GYAQ+G EAL F M NI P + T VSV+ A A + +
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++ F + + ++D+ + G + A +L + M
Sbjct: 357 GLVIRRF-LDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 176/373 (47%), Gaps = 28/373 (7%)
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Y + AL F M + +Y +L DL G + H +I SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
F N +G++++YAKC + D +F+ +P+ DLV WNTMISGY+Q ++ AL
Sbjct: 61 FSWNLFAMTGVVNMYAKCR-QINDAYNMFDRMPERDLVCWNTMISGYAQ-NGFAKVALML 118
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+++ G+ PD + V ++ A ++ +G +H ++ S ++V+ ALV MYS
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFES-LVNVSTALVDMYS 177
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG++ AR +FD M VS NSMI GY Q G A+ +F+ ML+ + PTN+T +
Sbjct: 178 KCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMG 237
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE----- 495
L ACA G + G K+ + D + + + +I + + ++ A + +
Sbjct: 238 ALHACADLGDLERG-KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Query: 496 --------AMPFNPGSIALKAANHFLQLEPSNAVP--YVMLANIYAAS-------GKWEE 538
+ + +A N F +++ N P + M++ I A + KW
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 539 VATIRRLMRDRGV 551
IRR + D+ V
Sbjct: 357 GLVIRRFL-DKNV 368
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 36/348 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L R L G ++H L+ +S + +YSKCG +S A F+
Sbjct: 133 TIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGM 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H V S +N++I Y GD E A+ +F+
Sbjct: 193 DHRTVVS-------------------------------WNSMIDGYVQSGDAEGAMLIFQ 221
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ T+ G + A ++ +L K +H L D SV NSL++ YS+
Sbjct: 222 KMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCK 281
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A +F + K VSWN+M++ Y Q+ EAL F EM S + D +T+ S++
Sbjct: 282 RVDIAADIFKNLRN-KTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVI 340
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L H +I+ +N + + L+D+YAKC G + K+F+ + +
Sbjct: 341 PALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKC-GAIHTARKLFDMMNARHV 399
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ WN MI GY ++ FK++ + P+D +F+C +SACS+
Sbjct: 400 ITWNAMIDGYGT-HGLGKTSVELFKEMKKGTIKPNDITFLCALSACSH 446
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 15/305 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++V N L++ Y++ R+ A +F + LVS+N +I YA G AL+ F +M
Sbjct: 265 SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEM 324
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ + D FT+ +I A + L + +Q +H L I D V +L+ Y++ G
Sbjct: 325 QSRNIKPDSFTMVSVIPALA-ELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGA 383
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+++F +M + ++WN+M+ YG H G +++LF+EM + + T L+
Sbjct: 384 IHTARKLF-DMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALS 442
Query: 240 AFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
A + + GL F + K G ++DL + +G + +++P +P
Sbjct: 443 ACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGR-AGRLNQAWDFIQKMPIKPG 501
Query: 298 LVLWNTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
+ ++ M+ + + ++A KLN PDD + +++ + GK
Sbjct: 502 ITVYGAMLGACKIHKNVDLGEKAAFEIFKLN-----PDDGGYHVLLANIYATASMWGKVA 556
Query: 356 HALTI 360
TI
Sbjct: 557 KVRTI 561
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
K +H L ++ + + ++ + +Y+KCG + A F+ +V ++N ++ Y
Sbjct: 353 KWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTH 412
Query: 79 LRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
++ +LF ++ +P+ +++ +SA + G E L F+ M++
Sbjct: 413 GLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKK 462
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/779 (33%), Positives = 410/779 (52%), Gaps = 106/779 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCG----CLSAAHHAF 57
+ ++L+ C + G+++HA +K + S YL N+ + Y+ G C A F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 58 NQTQHA--NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
+ +A N F++N LL+ YA+ R+ A +F ++P D VS+ +I G A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 116 LSLFKDMREKRFDTDGFTLSGLITA-SSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTC 173
+ F DM + F FTL+ ++++ ++ C + +++H + G V NS+L
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY--------------------------- 206
Y + G + A+ VF M +++ SWN MV Y
Sbjct: 392 YGKCGDAETARAVFERM-QVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTI 450
Query: 207 --GQHREGLE--ALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
G ++ GL+ AL+ F M+S + D +T+ S+L+A +L L G Q H++++++G
Sbjct: 451 IAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTG 510
Query: 262 FHQNSHIGSGLIDLYAKCS--------------------------------GDMRDCMKV 289
+S I + LI YAK GD + ++
Sbjct: 511 MPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREI 570
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS- 348
F+ + D++ W MI GY Q + +D+A+ F+ + +G P+ + V+SAC++L+
Sbjct: 571 FDIMNNRDVIAWTAMIVGYHQNGQ-NDEAMELFRSMILIGPEPNSHTLAAVLSACASLAY 629
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMI 407
GKQIH I+ ++ +SV+NA++ +Y++ G++ ARR+FD++ T++ SMI
Sbjct: 630 LDYGKQIHCKAIR-SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMI 688
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
AQHG+G +A+ LFE M+ + P +IT+V VLSACAH G V +G++Y+ M++ G
Sbjct: 689 VAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGI 748
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAAN 510
P+ HY+CM+DL RAG LT+A I+ MP P ++ A AA
Sbjct: 749 VPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAG 808
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
L ++P N+ Y LAN+Y+A G+W + A I +L +D+GV+K+ GFSW V+ ++HVF
Sbjct: 809 KLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFG 868
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
A+D HP I+ EM ++K+AG+VPD KE+ L HSEKLA+AFG
Sbjct: 869 ADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFG 928
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ST + +MKNLR+C DCH AIKFIS REI VRD RFH F+DG CSC DYW
Sbjct: 929 LISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/647 (40%), Positives = 376/647 (58%), Gaps = 42/647 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ IA AR++F + D VS+N++I+ G A+ +K MR
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FTL ++ AS L +Q+H ++ G D SV+N+L+T Y+ G+L+E +++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M E D+VSWNS++ A + L EA+ F L+ T +S+L+A +SL
Sbjct: 473 FSSMPE-HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
G Q H +K+ + + LI Y KC G+M C K+F + + D V WN+M
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKC-GEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY E + +AL + + G D + V+SA ++++ G ++HA +++
Sbjct: 591 ISGYIHNELLA-KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG L+ A R F+ MP N+ S NSMI+GYA+HG G EAL+LF
Sbjct: 650 LESD-VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 424 EWM-LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
E M L+ PP ++TFV VLSAC+H G + EG K+F M D +G P EH+SCM D+LG
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 483 RAGKLTDAERLIEAMPFNP-------------------GSIALKAANHFLQLEPSNAVPY 523
RAG+L E IE MP P + KAA QLEP NAV Y
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 828
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L N+YAA G+WE++ R+ M+D V+K+ G+SW+ +K +H+FVA D SHP I+
Sbjct: 829 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIY 888
Query: 584 NYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLST-SYGEPILV 630
L+E++RKM+ AGYVP +KE+ L +HSEKLAVAF L + S PI +
Sbjct: 889 KKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRI 948
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
MKNLR+CGDCH+A K+IS I GR+I +RD+ RFH F+DG CSC D+W
Sbjct: 949 MKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 215/426 (50%), Gaps = 50/426 (11%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC-GCLSAAHHAF 57
F VL+ C +G ++ G+ +H L K A +SN I +Y KC G + A AF
Sbjct: 104 AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 58 NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
+ N S+ N++IS Y+ GD SA
Sbjct: 164 GDIEVKNSVSW-------------------------------NSIISVYSQAGDQRSAFR 192
Query: 118 LFKDMREKRFDTDGFTLSGLITASSN----NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
+F M+ +T L+T + + ++ L++Q+ C G V + L++
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
++++G L A++VF +M E ++ V+ N ++V + + G EA +LF +M S+ + + +
Sbjct: 253 FAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPES 310
Query: 234 LASILTAFT--SLEDLVG---GLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCM 287
+L++F SL + VG G + H H+I +G IG+GL+++YAKC G + D
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC-GSIADAR 369
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF + D V WN+MI+G Q + +A+ +K + R P + + +S+C++L
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFI-EAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 348 S-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
LG+QIH ++K+ I N +SV+NAL+ +Y++ G L + R++F MPEH+ VS NS+
Sbjct: 429 KWAKLGQQIHGESLKLGIDLN-VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 407 IAGYAQ 412
I A+
Sbjct: 488 IGALAR 493
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 223/449 (49%), Gaps = 20/449 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V+ N L+ AY SAR++FD++P + VS+ ++S Y+ G+ + AL +DM
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 124 EKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN-G 178
++ ++ + ++ A S + +Q+H L + A V+N L++ Y + G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A F ++ E+K+ VSWNS++ Y Q + A ++F M YT S++
Sbjct: 155 SVGYALCAFGDI-EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 239 TAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
T SL + L Q + KSG + +GSGL+ +AK SG + KVF ++
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK-SGSLSYARKVFNQMETR 272
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS----- 350
+ V N ++ G ++++ ++A F +N + P+ S+V ++S+ S +
Sbjct: 273 NAVTLNGLMVGLV-RQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGL 329
Query: 351 -LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G+++H I + + + N LV MY+KCG++ DARR+F M + ++VS NSMI G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Q+G +EA+ ++ M +I P + T +S LS+CA GQ+ + G +
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDL 448
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ L G L + ++ +MP
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ VL L G +HA ++ + + + + +YSKCG L A FN
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFD------QIPQPDLVSYNTLISAYADCGDTESA 115
N +S+N +++ YAR + A +LF+ Q P PD V++ ++SA + G E
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP-PDHVTFVGVLSACSHAGLLEEG 740
Query: 116 LSLFKDMRE 124
F+ M +
Sbjct: 741 FKHFESMSD 749
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/683 (35%), Positives = 380/683 (55%), Gaps = 45/683 (6%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
K L + SN+ + + + G + A FN+ V + +++ YA + R+ A +
Sbjct: 43 KKLSILTTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALK 102
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL- 145
LF ++P DL+S+N+++ CGD A ++F M E+ + ++GL+ +
Sbjct: 103 LFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVA 162
Query: 146 -CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
CL + + + + NS++ + NG +++A +F +M ++ +SW S++
Sbjct: 163 ECLFRVMPTKDV--------TAWNSMVHGFFSNGRVEDAIELFEKMPN-RNVISWTSVIG 213
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+ EAL +F +M++ TLA LTA ++ G+Q H ++K+G+
Sbjct: 214 GLDHNGRSFEALVVFHKMLA-SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCF 272
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
N +I + LI YA C + + +F + ++V+W +++GY ++D AL FK
Sbjct: 273 NEYISASLISFYANCK-LIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTD-ALQVFKG 330
Query: 325 LNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ R+ P+ S +++C L + G+++HA+ K+ + S+ I V+N+LV MY+KCG
Sbjct: 331 MMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESD-IFVSNSLVVMYTKCG 389
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
++ D +F RM N VS NS+I G AQHG G AL LF M+ T + P IT +LS
Sbjct: 390 HINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLS 449
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG- 502
AC H+G + +G+ +F FG E EHYS M+DLLGR G+L +AE LI MP
Sbjct: 450 ACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANY 509
Query: 503 ----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+A +AA L L+P+ + Y +L+N+YA++GKW EV+ IR+ M
Sbjct: 510 MVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKM 569
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
+D G+ K+PG SWI +K H F++ D SHP+ ++I+ LE + K+K+ GYVPD
Sbjct: 570 KDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSF 629
Query: 602 -------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
KE+ L +HSE+LA+ FGL+ST G I+VMKNLRICGDCHNA+K S + GRE
Sbjct: 630 HDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGRE 689
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD RFH F +G CSCGDYW
Sbjct: 690 IVVRDPSRFHHFHNGTCSCGDYW 712
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 151/374 (40%), Gaps = 45/374 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C G +H L +K F+ Y+S I Y+ C + A FN
Sbjct: 241 TLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDN 300
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV-SYNTLISAYADCGDTESALSLF 119
NV + LL Y R A Q+F + + ++ + ++L SA C E+
Sbjct: 301 VSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAV---- 356
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D +++H +A G + V+NSL+ Y++ G
Sbjct: 357 --------DRG------------------REVHAVAHKLGLESDIFVSNSLVVMYTKCGH 390
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++ VF M K+ VSWNS++V QH G AL LF +M+ ++ D TLA +L+
Sbjct: 391 INDGIAVFTRMSR-KNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLS 449
Query: 240 AFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
A L G F H K+ G + S ++DL + G + + + +P + +
Sbjct: 450 ACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGR-YGQLEEAEALIHIMPGKAN 508
Query: 298 LVLWNTMISGYSQKEE--YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
++W ++S +++A C L +CS + SNL S GK
Sbjct: 509 YMVWLALLSSSINHSNVHVAERAAKCVLDLQ------PNCS--AAYTLLSNLYASTGKWT 560
Query: 356 HALTIKIEIRSNRI 369
I+ +++ I
Sbjct: 561 EVSKIRKKMKDEGI 574
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/686 (35%), Positives = 385/686 (56%), Gaps = 59/686 (8%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
+CG + A F++ ++ + N +L YA+ + A ++F +P+ D+VS+N +ISA
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAI--YCGFD 161
+ G AL + DM K D T + +TA + ++L KQLH I D
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID 325
Query: 162 HYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
Y V ++++ Y++ G EAKRVF + + ++ VSW ++ + Q+ E+++LF +
Sbjct: 326 PY--VASAMVELYAKCGCFKEAKRVFSSLRD-RNSVSWTVLIGGFLQYGCFSESVELFNQ 382
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M + + +D + LA++++ + D+ G Q H+ +KSG + + + LI +YAKC G
Sbjct: 383 MRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKC-G 441
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQ-------KEEYSDQA----------LGCFKK 324
++++ +F + + D+V W MI+ YSQ +E + D + LG + +
Sbjct: 442 NLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQ 501
Query: 325 --------------LNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRI 369
L PD ++V + C+++ + LG QI T+K+ + +
Sbjct: 502 HGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILD-T 560
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
SV NA++ MYSKCG + +AR+ FD + + VS N+MI GY+QHG+G +A+ +F+ +L
Sbjct: 561 SVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNK 620
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
P I++V+VLS C+H+G V EG+ YF MMK P EH+SCM+DLLGRAG L +
Sbjct: 621 GAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIE 680
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A+ LI+ MP P + +A AA H L+ + Y++LA +YA
Sbjct: 681 AKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYAD 740
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+GK ++ A +R+LMRD+G++K PG+SW+EV ++HVF AED SHP + I L+E+ K
Sbjct: 741 AGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEK 800
Query: 593 MKQAGYVPDKEKRL-VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
+ GYV + R +HHSEKLAVAFG++S PI +MKNLRIC DCH IK IS +
Sbjct: 801 IAHLGYVRTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVT 860
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
RE +RD RFH FK G CSC DYW
Sbjct: 861 DREFVIRDGVRFHHFKGGSCSCMDYW 886
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 256/555 (46%), Gaps = 73/555 (13%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF-NQTQHAN 64
L++C R L ++LH+ + + +L N + Y CG LS A + ++ N
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V + N+++ YA+ ++ A +LF ++P D+ S+NT++S Y G +AL +F MR+
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 125 KRFD-TDGFT-------------------LSGLITA--SSNNLCLIKQLHCLAIYCGFDH 162
+ FT L GL++ S ++ + L + + CG
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMD 211
Query: 163 YAS------------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+AS NS+L Y+++ +D A +F M E +D VSWN ++ A +
Sbjct: 212 FASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPE-RDVVSWNMVISALSKSG 270
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EAL + +M + D T S LTA L L G Q H +I++ H + ++ S
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
+++LYAKC G ++ +VF + + V W +I G+ Q +S +++ F ++
Sbjct: 331 AMVELYAKC-GCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFS-ESVELFNQMRAELM 388
Query: 331 HPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED-- 387
D + +IS C N + LG Q+H+L +K + + V+N+L++MY+KCGNL++
Sbjct: 389 AVDQFALATLISGCCNTMDICLGSQLHSLCLK-SGHTRAVVVSNSLISMYAKCGNLQNAE 447
Query: 388 -----------------------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
AR FD M N ++ N+M+ Y QHG +
Sbjct: 448 LIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEED 507
Query: 419 ALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
L+++ ML E ++ P +T+V++ CA G G + + G + + +
Sbjct: 508 GLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKV-GLILDTSVVNAV 566
Query: 478 IDLLGRAGKLTDAER 492
I + + G++++A +
Sbjct: 567 ITMYSKCGRISEARK 581
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 197/453 (43%), Gaps = 76/453 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C L GK LH ++NL Y+++ + LY+KCGC A F+
Sbjct: 293 TYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSL 352
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N S+ VL+ + + + + +LF+Q
Sbjct: 353 RDRNSVSWTVLIGGFLQYGCFSESVELFNQ------------------------------ 382
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + D F L+ LI+ N ++CL QLH L + G V+NSL++ Y++ G
Sbjct: 383 -MRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCG 441
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL----------- 227
L A+ +F M E +D VSW M+ AY Q +A + F +M + +
Sbjct: 442 NLQNAELIFNFMAE-RDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYI 500
Query: 228 -------GLDMYT-----------LASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNS 266
GL MY+ + +T F D+ G Q H +K G ++
Sbjct: 501 QHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDT 560
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + +I +Y+KC G + + K F+ + + DLV WN MI+GYSQ QA+ F +
Sbjct: 561 SVVNAVITMYSKC-GRISEARKAFDFLSRKDLVSWNAMITGYSQ-HGMGKQAIEIFDDIL 618
Query: 327 RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKC 382
G PD S+V V+S CS+ + + +K R + IS + +V + +
Sbjct: 619 NKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMK---RDHNISPGLEHFSCMVDLLGRA 675
Query: 383 GNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHG 414
G+L +A+ L D MP T + ++++ HG
Sbjct: 676 GHLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 708
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 28/243 (11%)
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
++ EI + +N ++ Y+K G+L DA LF RMP + S N++++GY Q G + A
Sbjct: 83 LRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNA 142
Query: 420 LRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
L +F M +T + P TF V+ +C G + ++ F + + + + ++
Sbjct: 143 LDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSK-FDSQDDPDVQTALV 201
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKA----------ANHFLQLEPS----NAVPYV 524
D+L R G + A + + NP I + +H L++ S + V +
Sbjct: 202 DMLVRCGAMDFASKQFSRIK-NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWN 260
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPG-----------FSWIEVKKQMHVFVAED 573
M+ + + SG+ E + M +GV+ S +E KQ+HV V +
Sbjct: 261 MVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN 320
Query: 574 GSH 576
H
Sbjct: 321 LPH 323
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/740 (35%), Positives = 388/740 (52%), Gaps = 113/740 (15%)
Query: 49 CLSAAHHAFNQTQ--HANVFS---FN------VLLAAYARQLRIASARQLFDQIPQPDLV 97
CL++ + +QT+ HA++ FN LL+ YA + A A + D +P+P++
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLA 155
S++TLI A++ ALS F M + D L + A + + L +Q+H +A
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140
Query: 156 IYCGFDHYASVNNSLL-------------------------------TCYSRNGFLDEAK 184
GFD + V +SL+ Y+R G +DEAK
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 185 RVFYEMGEI---KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
R+F EMG+ + +SWN M+ + EA+ +F +M D T++S+L A
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--------------------- 280
LEDLV G+ H ++IK G + + S LID+Y KCS
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320
Query: 281 ---------GDMRDCMKVFEEIP----QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
G + +++F ++ + ++V W +MI+ SQ +AL F+++
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR-DIEALELFREMQI 379
Query: 328 VGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P+ + C++ AC N++ + GK H +++ I S + V +AL+ MY+KCG ++
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI-STDVYVGSALIDMYAKCGRIQ 438
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+R FD +P N V N++IAGYA HG EA+ +F+ M + P I+F VLSAC+
Sbjct: 439 ASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACS 498
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---- 502
+G EG YF+ M +G E EHY+CM+ LL RAGKL A +I MP NP
Sbjct: 499 QSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVW 558
Query: 503 -------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
S+ AA +LEPSN Y++L+NIYA+ G W EV +R +M+++
Sbjct: 559 GALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNK 618
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--------- 600
G++K PG SWIEVK ++H+ +A D SHP + +I L+++S +MK+ GY P
Sbjct: 619 GLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDV 678
Query: 601 ---DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
DKE+ L HSEKLAV FGLL+T G P+ V+KNLRICGDCH IKFIS+ REI V
Sbjct: 679 EEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFV 738
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RDT RFH FK+G CSCGDYW
Sbjct: 739 RDTNRFHHFKEGACSCGDYW 758
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 12/315 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL DLV G +H +K + +S+ I +Y KC C S F+Q
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311
Query: 61 QHANVFSFNVLLAAYARQLRIASA----RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
H +V S N + +R ++ S+ RQL DQ + ++VS+ ++I+ + G AL
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEAL 371
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCY 174
LF++M+ + T+ L+ A N L+ K HC ++ G V ++L+ Y
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G + +A R+ ++ K+ V WN+++ Y H + EA+++F M D+ +
Sbjct: 432 AKCGRI-QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISF 490
Query: 235 ASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+L+A S L G F++ K G + ++ L ++ +G + +
Sbjct: 491 TCVLSA-CSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSR-AGKLEQAYAMIRR 548
Query: 293 IP-QPDLVLWNTMIS 306
+P PD +W ++S
Sbjct: 549 MPVNPDACVWGALLS 563
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 261/708 (36%), Positives = 388/708 (54%), Gaps = 68/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +LK C +L GK +H L +K+ FS
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKS--GFSL--------------------------- 168
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++F+ L YA+ ++ AR++FD++P+ DLVS+NT+++ Y+ G AL + K
Sbjct: 169 --DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E+ T+ ++ A S L LI K++H A+ GFD +++ +L+ Y++ G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSA-LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ A+++F M E ++ VSWNSM+ AY Q+ EA+ +FQ+M+ + ++ L
Sbjct: 286 SLETARQLFDGMLE-RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL G H ++ G +N + + LI +Y KC ++ +F ++ L
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK-EVDTAASMFGKLQSRTL 403
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
V WN MI G++Q D AL F ++ PD ++V VI+A + LS + K IH
Sbjct: 404 VSWNAMILGFAQNGRPID-ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ ++ + N + V ALV MY+KCG + AR +FD M E + + N+MI GY HG G
Sbjct: 463 VVMRSCLDKN-VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
AL LFE M + I P +TF+SV+SAC+H+G V G K F MMK+ + E +HY M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGRAG+L +A I MP P + A KAA +L P +
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+LANIY A+ WE+V +R M +G++K PG S +E+K ++H F + +HP K
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 581 EIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
+I+ +LE++ +K+AGYVPD KE+ L HSEKLA++FGLL+T+ G I
Sbjct: 702 KIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLR+C DCHNA K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 172/322 (53%), Gaps = 5/322 (1%)
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
+ L+ ++L ++Q+ L G L++ + R G +DEA RVF E + K
Sbjct: 40 AALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVF-EPIDSK 98
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
V +++M+ + + + +ALQ F M + +Y +L +L G + H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
L+KSGF + +GL ++YAKC + + KVF+ +P+ DLV WNT+++GYSQ
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCR-QVNEARKVFDRMPERDLVSWNTIVAGYSQN-GM 216
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNN 373
+ AL K + P + V V+ A S L S+GK+IH ++ S ++++
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS-LVNIST 275
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV MY+KCG+LE AR+LFD M E N VS NSMI Y Q+ EA+ +F+ ML+ + P
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 434 TNITFVSVLSACAHTGKVAEGQ 455
T+++ + L ACA G + G+
Sbjct: 336 TDVSVMGALHACADLGDLERGR 357
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 188/418 (44%), Gaps = 43/418 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL R + GK +H +++ +S + +Y+KCG L A F+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 61 QHANVFSFNVLLAAYARQLRIASA----RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
NV S+N ++ AY + A +++ D+ +P VS + A AD GD E
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG- 356
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
RF +H L++ G D SV NSL++ Y +
Sbjct: 357 ---------RF-----------------------IHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+D A +F ++ + + VSWN+M++ + Q+ ++AL F +M S + D +T S
Sbjct: 385 CKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++TA L H +++S +N + + L+D+YAKC G + +F+ + +
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC-GAIMIARLIFDMMSER 502
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+ WN MI GY + AL F+++ + P+ +F+ VISACS+ S + +
Sbjct: 503 HVTTWNAMIDGYGT-HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH-SGLVEAGLK 560
Query: 357 ALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ E S +S+++ A+V + + G L +A +MP V++ + G Q
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV+++ + G++++A R+F+ + V ++M+ G+A+ +AL+ F M ++ P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
F +L C ++ G++ ++ GF + + + ++ + ++ +A ++
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 495 EAMP 498
+ MP
Sbjct: 194 DRMP 197
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/646 (39%), Positives = 370/646 (57%), Gaps = 42/646 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ IA A +F+ + + D VS+N+LIS +E A F MR
Sbjct: 899 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM 958
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FTL ++ AS + L +Q+HC + G D SV+N+LL Y+ G E +V
Sbjct: 959 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 1018
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M E D+VSWNS++ A + +A++ F EM+ GL T +IL+A +SL
Sbjct: 1019 FSLMPEY-DQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLS 1077
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
Q HA ++K ++ IG+ L+ Y KC G+M +C K+F + + D V WN+M
Sbjct: 1078 LHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC-GEMNECEKIFARMSETRDEVSWNSM 1136
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY E +A+ + + G D +F V+SAC++++ G ++HA I+
Sbjct: 1137 ISGYIHNE-LLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRAC 1195
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG ++ A R F+ MP N S NSMI+GYA+HG G +AL+LF
Sbjct: 1196 MESD-VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF 1254
Query: 424 EWMLETNIPPTNIT-FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
M+ PP ++ + VLSAC+H G V EG ++F M +++ P EH+SCM+DLLG
Sbjct: 1255 TRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLG 1314
Query: 483 RAGKLTDAERLIEAMPFNPG-------------------SIALKAANHFLQLEPSNAVPY 523
RAGKL + I +MP P + +AA L+LEP NAV Y
Sbjct: 1315 RAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNY 1374
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+LAN+YA+ KWE+VA R M++ V+K+ G SW+ +K +HVFVA D HP I+
Sbjct: 1375 VLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIY 1434
Query: 584 NYLEEMSRKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVM 631
+ L E++RKM+ AGY+P + L +HSEK+AVAF +L+ PI +M
Sbjct: 1435 DKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIM 1493
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH+A +IS I GR+I +RD+ RFH F+DG+CSCGDYW
Sbjct: 1494 KNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 236/463 (50%), Gaps = 54/463 (11%)
Query: 2 FRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC-GCLSAAHHAFN 58
F L+ C G G +H L K + N I +Y C + A F+
Sbjct: 648 FGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 707
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ N S+N +++ Y+R+ GD SA L
Sbjct: 708 RIGIRNSISWNSIISVYSRR-------------------------------GDXVSAYDL 736
Query: 119 FKDMREK----RFDTDGFTLSGLITASSNN----LCLIKQLHCLAIYCGFDHYASVNNSL 170
F M+++ F + +T LITA+ ++ LC+++Q+ GF V ++L
Sbjct: 737 FSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSAL 796
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
++ ++R G D+AK +F +MG +++ VS N ++V + ++G A ++F EM L +G++
Sbjct: 797 VSGFARFGLTDDAKNIFEQMG-VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGIN 854
Query: 231 MYTLASILTAFTSL----EDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRD 285
+ +L+AF+ E G + HAH+I++G + N IG+GL+++YAK SG + D
Sbjct: 855 SDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK-SGAIAD 913
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VFE + + D V WN++ISG Q E S+ A F ++ R G P + + + +S+C+
Sbjct: 914 ACSVFELMVEKDSVSWNSLISGLDQN-ECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA 972
Query: 346 NLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+L LG+QIH +K+ + ++ +SV+NAL+A+Y++ G + ++F MPE++ VS N
Sbjct: 973 SLGWIMLGEQIHCDGLKLGLDTD-VSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 1031
Query: 405 SMIAGYAQHGIGM-EALRLFEWMLETNIPPTNITFVSVLSACA 446
S+I + + +A++ F M+ + +TF+++LSA +
Sbjct: 1032 SVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVS 1074
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 229/456 (50%), Gaps = 29/456 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+F N L+ Y R + SA++LFD++ +LV++ LIS Y G + A + F+DM
Sbjct: 577 GNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM 636
Query: 123 REKRFDTDGFTLSGLITA---SSNNLC-LIKQLHCLAIYCGFDHYASVNNSLLTCY-SRN 177
F + + + A S + C L Q+H L + V N L++ Y S
Sbjct: 637 VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCL 696
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM----YT 233
++A+ VF +G I++ +SWNS++ Y + + + A LF M LG YT
Sbjct: 697 DSANDARSVFDRIG-IRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYT 755
Query: 234 LASILTAFTSLEDLVGGL----QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
S++TA S D GL Q A + KSGF Q+ ++GS L+ +A+ G D +
Sbjct: 756 FGSLITAACSSVDF--GLCVLEQMLARVEKSGFLQDLYVGSALVSGFARF-GLTDDAKNI 812
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLS 348
FE++ ++V N ++ G K++ + A F ++ + VG + D S+V ++SA S S
Sbjct: 813 FEQMGVRNVVSMNGLMVGLV-KQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFS 869
Query: 349 -----PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
G+++HA I+ + N++++ N LV MY+K G + DA +F+ M E ++VS
Sbjct: 870 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 929
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMK 462
NS+I+G Q+ +A F M T P+N T +S LS+CA G + G++ + +K
Sbjct: 930 NSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 989
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G + + + ++ L G T+ ++ MP
Sbjct: 990 --LGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 159/317 (50%), Gaps = 13/317 (4%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
++LH +I GF ++N+L+ Y R G L A+++F EM ++ V+W ++ Y Q
Sbjct: 564 RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSN-RNLVTWACLISGYTQ 622
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLEDLVGGLQFHAHLIKSGFHQNS 266
+ + EA F++MV + Y S L A + G+Q H + K+ + +
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + LI +Y C D VF+ I + + WN++IS YS++ + A F +
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXV-SAYDLFSSMQ 741
Query: 327 RVG----YHPDDCSFVCVIS-ACSNLSPSLGKQIHALTIKIEIRS--NRISVNNALVAMY 379
+ G + P++ +F +I+ ACS++ L + + ++E + V +ALV+ +
Sbjct: 742 KEGLGFSFKPNEYTFGSLITAACSSVDFGLC-VLEQMLARVEKSGFLQDLYVGSALVSGF 800
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
++ G +DA+ +F++M N VS+N ++ G + G A ++F M + + + ++V
Sbjct: 801 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSYV 859
Query: 440 SVLSACAHTGKVAEGQK 456
+LSA + + EG++
Sbjct: 860 VLLSAFSEFSVLEEGRR 876
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G +HA ++ + + + + +YSKCG + A F
Sbjct: 1167 TFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELM 1226
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF-----DQIPQPDLVSYNTLISAYADCGDTESA 115
NV+S+N +++ YAR A +LF D P + ++SA + G E
Sbjct: 1227 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEG 1286
Query: 116 LSLFKDMRE 124
FK M E
Sbjct: 1287 FEHFKSMSE 1295
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 385/681 (56%), Gaps = 46/681 (6%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANVFSF---------NVLLAAYARQLRIASARQLF 88
N FI S + + ++ HA V + N + Y + + + Q F
Sbjct: 89 NQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFF 148
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLC 146
+ +L S N L+S + D + + + + F+ + +T ++ AS +L
Sbjct: 149 KAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLN 208
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K +H I G + + + NSL+ Y++ G + A +VF E+ E +D VSW +++ +
Sbjct: 209 EGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE-RDVVSWTALITGF 267
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
G L++F +M++ +MYT SIL + +SL D+ G Q HA ++K+ N
Sbjct: 268 VAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND 326
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+G+ L+D+YAK + + D +F + + DL W +++GY+Q + ++A+ CF ++
Sbjct: 327 FVGTALVDMYAK-NRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ-GEKAVKCFIQMQ 384
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
R G P++ + +S CS ++ G+Q+H++ IK +S + V +ALV MY+KCG +
Sbjct: 385 REGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG-QSGDMFVASALVDMYAKCGCV 443
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
EDA +FD + +TVS N++I GY+QHG G +AL+ FE ML+ P +TF+ VLSAC
Sbjct: 444 EDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSAC 503
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---- 501
+H G + EG+K+F+ + ++G P EHY+CM+D+LGRAGK + E IE M
Sbjct: 504 SHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLI 563
Query: 502 -----------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
G+I +AA +LEP Y++L+N++AA G W++V +R LM
Sbjct: 564 WETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMST 623
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-------- 600
RGV+K+PG SW+EV Q+HVF++ DGSHP I+EIH L+++ +K+ GY P
Sbjct: 624 RGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHN 683
Query: 601 --DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
D+EK+ L +HSE+LA+AF LLSTS + I + KNLRICGDCH+ +K IS I +E+
Sbjct: 684 VSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELV 743
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRD FH FK+G CSC ++W
Sbjct: 744 VRDINCFHHFKNGSCSCQNFW 764
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 176/372 (47%), Gaps = 26/372 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+SL+ Y + L A++V EM I+D WN + + EA+QLF M ++
Sbjct: 28 SSLVNVYVKCESLQCARQVLEEM-PIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRI 86
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
L+ + AS+++A SL D G HA + K GF + I + + +Y K + + +
Sbjct: 87 RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMK-TQSVENGW 145
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+ F+ + +L N ++SG+ E DQ +L G+ P+ +F+ ++ C++
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTET-CDQGPRILIQLLVEGFEPNMYTFISILKTCASK 204
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ GK IH IK I + + N+LV +Y+KCG+ A ++F +PE + VS ++
Sbjct: 205 GDLNEGKAIHGQVIKSGINPDS-HLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTAL 263
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMF 465
I G+ G G LR+F ML P TF+S+L +C+ V G Q + ++K+
Sbjct: 264 ITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL 322
Query: 466 GFEPEGEHY--SCMIDLLGRAGKLTDAE----RLIEAMPFNPGSIAL---------KAAN 510
+G + + ++D+ + L DAE RLI+ F I KA
Sbjct: 323 ----DGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 378
Query: 511 HFLQLEPSNAVP 522
F+Q++ P
Sbjct: 379 CFIQMQREGVKP 390
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+IK+G +SH+ S L+++Y KC ++ +V EE+P D+ WN +S S Y
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCE-SLQCARQVLEEMPIQDVQQWNQKLS--SANSPYPL 71
Query: 317 Q-ALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNA 374
Q A+ F + + F +ISA ++L + G+ IHA K S+ I ++NA
Sbjct: 72 QEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD-ILISNA 130
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
V MY K ++E+ + F M N S N++++G+ + R+ +L P
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPN 190
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
TF+S+L CA G + EG+ + G P+ ++ ++++ + G A ++
Sbjct: 191 MYTFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACKVF 249
Query: 495 EAMP 498
+P
Sbjct: 250 GEIP 253
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 141/309 (45%), Gaps = 37/309 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L++C D+ GK +HA +KN + + ++ + +Y+K L A FN+
Sbjct: 293 TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 352
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F++ V++A YA+ G E A+ F
Sbjct: 353 IKRDLFAWTVIVAGYAQD-------------------------------GQGEKAVKCFI 381
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + + FTL+ ++ S L +QLH +AI G V ++L+ Y++ G
Sbjct: 382 QMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCG 441
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ VF + +D VSWN+++ Y QH +G +AL+ F+ M+ D T +L
Sbjct: 442 CVEDAEVVFDGLVS-RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVL 500
Query: 239 TAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + + G + L K G + ++D+ + +G + EE+
Sbjct: 501 SACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR-AGKFHEVESFIEEMKLTS 559
Query: 297 DLVLWNTMI 305
++++W T++
Sbjct: 560 NVLIWETVL 568
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/602 (39%), Positives = 358/602 (59%), Gaps = 52/602 (8%)
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
DCG E +L+ + KR G G K +H + F H +
Sbjct: 66 DCGSLEPDRTLYNTLL-KRCTQLGKLKEG------------KLVHFHVLNSNFKHDLVIQ 112
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSLL Y+R G L+ A+R+F EM +D VSW SM+ Y Q+ +AL LF M+S
Sbjct: 113 NSLLFMYARCGSLEGARRLFDEMPH-RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGA 171
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ +TL+S++ + G Q HA K G H N +GS L+D+YA+C G + + M
Sbjct: 172 EPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARC-GYLGEAM 230
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+++ + V WN +I+GY++K E ++AL F ++ R GY P + ++ ++S+CS++
Sbjct: 231 LVFDKLGCKNEVSWNALIAGYARKGE-GEEALALFVRMQREGYRPTEFTYSALLSSCSSM 289
Query: 348 SP-SLGKQIHALTIKIEIRSNRIS--VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
GK +HA +K S ++ V N L+ MY+K G++ DA ++FD++ + + VS N
Sbjct: 290 GCLEQGKWLHAHLMK---SSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCN 346
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
SM+ GYAQHG+G EA + F+ M+ I P +ITF+SVL+AC+H + EG+ YF +M+
Sbjct: 347 SMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK- 405
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALK 507
+ EP+ HY+ ++DLLGRAG L A+ IE MP P +
Sbjct: 406 YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAY 465
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA +L+PS + +LANIYA++G+WE+VA +R++M+D GV+K+P SW+EV+ +H
Sbjct: 466 AAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVH 525
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
VFVA D +HP ++IH E++++K+K+ GYVPD KE L +HSEKLA+
Sbjct: 526 VFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLAL 585
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
+F LL+T G I +MKN+R+CGDCH+AIK++S + REI VRDT RFH F DG CSCGD
Sbjct: 586 SFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGD 645
Query: 676 YW 677
YW
Sbjct: 646 YW 647
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 216/420 (51%), Gaps = 23/420 (5%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H N ++ N LL YAR + AR+LFD++P D+VS+ ++I+ YA
Sbjct: 99 HVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASD 158
Query: 115 ALSLFKDMREKRFDTDGFTLSGLIT-----ASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
AL LF M + + FTLS L+ AS N +Q+H G V +S
Sbjct: 159 ALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN---CGRQIHACCWKYGCHSNVFVGSS 215
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y+R G+L EA VF ++G K+EVSWN+++ Y + EG EAL LF M
Sbjct: 216 LVDMYARCGYLGEAMLVFDKLG-CKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRP 274
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+T +++L++ +S+ L G HAHL+KS ++G+ L+ +YAK SG +RD KV
Sbjct: 275 TEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAK-SGSIRDAEKV 333
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS- 348
F+++ + D+V N+M+ GY+Q +A F ++ R G P+D +F+ V++ACS+
Sbjct: 334 FDKLVKVDVVSCNSMLIGYAQ-HGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARL 392
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
GK L K I ++S +V + + G L+ A+ + MP TV++ +
Sbjct: 393 LDEGKHYFGLMRKYNIEP-KVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451
Query: 409 GYAQHGIGME-----ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
G ++ E A R+FE L+ + P T+ ++ ++ VA+ +K +MKD
Sbjct: 452 GASKMHKNTEMGAYAAQRVFE--LDPSYPGTHTLLANIYASAGRWEDVAKVRK---IMKD 506
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+ GL L L + SL+ +Y ++L T L L G H H++ S F + I
Sbjct: 56 KTGLHVLDLI-DCGSLEPDRTLYN--TLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQ 112
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ L+ +YA+C G + ++F+E+P D+V W +MI+GY+Q + SD AL F ++ G
Sbjct: 113 NSLLFMYARC-GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASD-ALLLFPRMLSDG 170
Query: 330 YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P++ + ++ C + S + G+QIHA K SN + V ++LV MY++CG L +A
Sbjct: 171 AEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSN-VFVGSSLVDMYARCGYLGEA 229
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+FD++ N VS N++IAGYA+ G G EAL LF M PT T+ ++LS+C+
Sbjct: 230 MLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSM 289
Query: 449 GKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + +G+ + +MK + G + ++ + ++G + DAE++ + +
Sbjct: 290 GCLEQGKWLHAHLMKS--SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL 337
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 157/316 (49%), Gaps = 25/316 (7%)
Query: 13 RDLVTGKSLHALYLKN------LVPFSAYLS-----NHFIL--LYSKCGCLSAAH----- 54
RD+V+ S+ Y +N L+ F LS N F L L CG +++ +
Sbjct: 138 RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQI 197
Query: 55 HA--FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
HA + H+NVF + L+ YAR + A +FD++ + VS+N LI+ YA G+
Sbjct: 198 HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEG 257
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
E AL+LF M+ + + FT S L+++ S+ CL K LH + V N+L
Sbjct: 258 EEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTL 317
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y+++G + +A++VF ++ ++ D VS NSM++ Y QH G EA Q F EM+ + +
Sbjct: 318 LHMYAKSGSIRDAEKVFDKLVKV-DVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPN 376
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T S+LTA + L G + + K + ++DL + +G +
Sbjct: 377 DITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGR-AGLLDQAKSFI 435
Query: 291 EEIP-QPDLVLWNTMI 305
EE+P +P + +W ++
Sbjct: 436 EEMPIEPTVAIWGALL 451
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 37/214 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L +C L GK LHA +K+ Y+ N + +Y+K G + A F++
Sbjct: 278 TYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL 337
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S N +L YA+ A Q FD++ +P+ +++ ++++A + +
Sbjct: 338 VKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGK 397
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ + HYA++ + L R
Sbjct: 398 HYFGLMRKYNIEPK-----------------------------VSHYATIVDLL----GR 424
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G LD+AK EM W +++ A H+
Sbjct: 425 AGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHK 458
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 388/708 (54%), Gaps = 74/708 (10%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+V+++C L G+ +H L + + Y+SNH +++Y KCG L
Sbjct: 39 RVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLE------------ 86
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
AR +F+ P ++ S+ LI+ A G ++ AL+LF +M
Sbjct: 87 -------------------EARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEML 127
Query: 124 EKRFDTDGFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
++ + + I A S L + LH L GF SL++ YS+ G L
Sbjct: 128 KQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSL 187
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+E+ + F M E+ + VSWN+M+ A+ +HR GLEAL+ Q+M + T ++++A
Sbjct: 188 EESVKTFESMTEL-NAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSA 246
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L H ++++GF Q+ + + ++++Y KC G ++D +F+ + QPD++
Sbjct: 247 YDQPSQLKSARYIHDCILRTGFDQD--VVNVILNMYGKC-GCLQDAEAMFKSMSQPDVIA 303
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WNTMI+ YSQ ++ +AL ++ + G PDD ++V VI AC+ L +GKQ+H
Sbjct: 304 WNTMIAAYSQ-HGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHR-- 360
Query: 360 IKIEIRSNRIS-VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ R+ +++ + N+LV MY KCG L+ AR +FD+ + +V+ N+MI YAQH +
Sbjct: 361 -RLGDRAFQVTELANSLVNMYGKCGILDVARSIFDKTAK-GSVTWNAMIGAYAQHSHEQQ 418
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A LF M P+ ITF+SVLSACA+ G E YF M+ G P G HY CM+
Sbjct: 419 AFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMV 478
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAV 521
+ LG+AG+L+DAE LI+ MPF P + AA ++++P +
Sbjct: 479 ESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEAST 538
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV LA I+A +G ++E + IR+LM DRG++K G S I++ ++ F A D S+P KE
Sbjct: 539 GYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKE 598
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I + L+ + ++MK+AGY PD KE L HSE+LA+AFG++STS G P+
Sbjct: 599 IFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLR 658
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLR+CGDCH K S I REI VRD+ RFH FK+G CSC D+W
Sbjct: 659 IMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 196/402 (48%), Gaps = 20/402 (4%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIY 157
+TL+S G +A+ D +KR D D +I + + L +++H L
Sbjct: 7 STLLSKRQQLGQIAAAI----DALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRR 62
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G V+N L+ Y + G L+EA+ VF E K+ SW ++ QH EAL
Sbjct: 63 VGLGSDVYVSNHLVMMYGKCGSLEEARLVF-EATPAKNVFSWTILITVCAQHGRSQEALA 121
Query: 218 LFQEMVSLQLGLDMYTL---ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
LF EM L+ G+ +++ A+I E L G HA L + GF + L+
Sbjct: 122 LFYEM--LKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y+KC G + + +K FE + + + V WN MI+ +++ +AL +K+ G
Sbjct: 180 MYSKC-GSLEESVKTFESMTELNAVSWNAMIAAFAEHRR-GLEALRTLQKMFLEGIRACS 237
Query: 335 CSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+++ ++SA S + IH ++ + V N ++ MY KCG L+DA +F
Sbjct: 238 VTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD---VVNVILNMYGKCGCLQDAEAMFK 294
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
M + + ++ N+MIA Y+QHG EALR +E M E + P + T+VSV+ ACA G +
Sbjct: 295 SMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEV 354
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
G++ + D F+ E + ++++ G+ G L A + +
Sbjct: 355 GKQVHRRLGDR-AFQVT-ELANSLVNMYGKCGILDVARSIFD 394
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 204/473 (43%), Gaps = 54/473 (11%)
Query: 1 TFRQVLKTC-VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+F + C G L G++LHAL + + + + +YSKCG L + F
Sbjct: 137 SFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFES 196
Query: 60 TQHANVFSFNVLLAAYARQLR----IASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
N S+N ++AA+A R + + +++F + + V+Y TL+SAY +SA
Sbjct: 197 MTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSA 256
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ +H + GFD V N +L Y
Sbjct: 257 ---------------------------------RYIHDCILRTGFDQ--DVVNVILNMYG 281
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L +A+ +F M + D ++WN+M+ AY QH EAL+ ++ M + D YT
Sbjct: 282 KCGCLQDAEAMFKSMSQ-PDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYV 340
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S++ A +L D+ G Q H L F Q + + + L+++Y KC G + +F++ +
Sbjct: 341 SVIDACATLGDMEVGKQVHRRLGDRAF-QVTELANSLVNMYGKC-GILDVARSIFDKTAK 398
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
V WN MI Y+Q + QA F + G P +F+ V+SAC+N L ++
Sbjct: 399 GS-VTWNAMIGAYAQ-HSHEQQAFELFLLMRLDGEEPSYITFMSVLSACAN--AGLPEEA 454
Query: 356 HALTIKIEIRSNRISVNNA----LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGY 410
H+ + ++ + + + +V K G L DA L MP E + ++ S +A
Sbjct: 455 HSYFVCMQ-QDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANC 513
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
HG + + + P + +V++ A G E + +M D
Sbjct: 514 RSHGDMKRGKFAAKGAIRID-PEASTGYVALARIHADAGDFQEASRIRKLMLD 565
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/713 (34%), Positives = 388/713 (54%), Gaps = 80/713 (11%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQI----P 92
+N I Y K G L A F+ ++ +L+ Y++ + A +LF Q+
Sbjct: 81 TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 140
Query: 93 QPDLVSY-----------------------------------NTLISAYADCGDTESALS 117
+PD V++ NTL+ +Y + A
Sbjct: 141 EPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQ 200
Query: 118 LFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
LFK+M E D FT + ++ A+ +++ L +Q+H I F V+N+LL YS
Sbjct: 201 LFKEMPE----IDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 256
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
++ + +A+++F EM E +D VS+N ++ Y + A LF+E+ + A
Sbjct: 257 KHDSVIDARKLFDEMPE-QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFA 315
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L+ ++ D G Q HA I + +G+ L+D+YAKC G + +F +
Sbjct: 316 TMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC-GKFEEAEMIFTNLTH 374
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
V W MIS Y QK Y ++ L F K+ + D +F ++ A +++ S SLGKQ
Sbjct: 375 RSAVPWTAMISAYVQKGFY-EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H+ IK SN S +AL+ +Y+KCG+++DA + F MP+ N VS N+MI+ YAQ+G
Sbjct: 434 LHSFIIKSGFMSNVFS-GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG 492
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
L+ F+ M+ + + P +++F+ VLSAC+H+G V EG +F+ M ++ +P EHY
Sbjct: 493 EAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY 552
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP 517
+ ++D+L R+G+ +AE+L+ MP +P I A +AA+ +E
Sbjct: 553 ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEE 612
Query: 518 -SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
+A PYV ++NIYAA+G+WE V+ + + MRDRGV+K P +SW+E+K + H+F A D H
Sbjct: 613 LRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCH 672
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P I+EI ++ +++ M++ GY PD K + L +HSE+LA+AF L+ST
Sbjct: 673 PQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPE 732
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PILVMKNLR C DCH AIK IS I GREITVRD+ RFH F+DG CSCGD+W
Sbjct: 733 GSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 177/450 (39%), Gaps = 99/450 (22%)
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM-------------- 190
L ++ + + GFD S +N + + +NG L +A+++F +M
Sbjct: 28 LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 87
Query: 191 -------GEIKD---------EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
GE + V+W ++ Y Q + EA +LF +M D T
Sbjct: 88 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L+ E Q +IK G+ +G+ L+D Y K S + ++F+E+P
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK-SNRLDLACQLFKEMP 206
Query: 295 Q----------------PDLVL--------------WNTMISG-----YSQKEEYSDQ-- 317
+ D+VL WN +S YS+ + D
Sbjct: 207 EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARK 266
Query: 318 ----------------------------ALGCFKKLNRVGYHPDDCSFVCVISACSN-LS 348
A F++L + F ++S SN L
Sbjct: 267 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 326
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+G+QIHA TI + + I V N+LV MY+KCG E+A +F + + V +MI+
Sbjct: 327 WEMGRQIHAQTI-VTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMIS 385
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Y Q G E L+LF M + ++ TF S+L A A ++ G++ S + GF
Sbjct: 386 AYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS-GFM 444
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
S ++D+ + G + DA + + MP
Sbjct: 445 SNVFSGSALLDVYAKCGSIKDAVQTFQEMP 474
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 46/219 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHF-----ILLYSKCGCLSAAHH 55
TF +L+ L GK LH+ +K S ++SN F + +Y+KCG + A
Sbjct: 414 TFASLLRASASIASLSLGKQLHSFIIK-----SGFMSNVFSGSALLDVYAKCGSIKDAVQ 468
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGD 111
F + N+ S+N +++AYA+ + + F ++ QPD VS+ ++SA + G
Sbjct: 469 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 528
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
E L F N++ I +L +HYASV + L
Sbjct: 529 VEEGLWHF-----------------------NSMTQIYKLDPRR-----EHYASVVDML- 559
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R+G +EA+++ EM DE+ W+S++ A H+
Sbjct: 560 ---CRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHK 595
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/734 (34%), Positives = 392/734 (53%), Gaps = 78/734 (10%)
Query: 18 GKSLHALYLKNLVPFSAYLSNH--FILLYSKCGCLSAAHHAFNQTQHANVFSF----NVL 71
G S AL L + ++H F+ + C L+ N+ ++ + SF N L
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANAL 148
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
+ YAR + A+++F + D S+N +I A++ GD AL +FK+M+ +
Sbjct: 149 VTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNS 207
Query: 132 FTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
T +I+ S L +++H + GFD V +L+ Y + G EA+ VF +
Sbjct: 208 TTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M + +D VSWN M+ Y Q+ + EAL+L+Q++ T SIL A +S++ L
Sbjct: 268 MKK-RDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG---------------------------- 281
G H+H+++ G + + L+++YAKC
Sbjct: 327 GRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 282 -----DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDC 335
D R KVF+ + D + WN MI+ Y Q + A+ F+++ G PD
Sbjct: 387 NGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNG-CAVAAMKIFREMTGAAGLKPDAV 445
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+F+ V+ AC++L S K +HA + E+ SN + V N L+ MY++CG+LE+A RLF
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESN-VVVTNTLINMYARCGSLEEAERLFAA 504
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
E VS +M+A ++Q+G EAL LF+ M + P ++T+ S+L C H G + +G
Sbjct: 505 AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-------- 506
+YF+ M ++ G P +H++ M+DLLGR+G+L DA+ L+E+MPF P +A
Sbjct: 565 WRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR 624
Query: 507 ---------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
AA +L+PS+ PY+ ++NIYAA G WE+VA++R+ M +RG++K PG
Sbjct: 625 IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGL 684
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKR 605
S+IEV ++H F + HP EI L + M+ AGYVPD KE
Sbjct: 685 SFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETM 744
Query: 606 LVHHSEKLAVAFGLLST-SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L++HSEK+A+AFGL+S+ GEPI V+KNLR+C DCH A KFI+ IAGR+I +RD RFH
Sbjct: 745 LLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFH 804
Query: 665 CF-KDGRCSCGDYW 677
F DG+CSCGDYW
Sbjct: 805 RFSSDGKCSCGDYW 818
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 267/534 (50%), Gaps = 76/534 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C D+ G++LH + + N I +Y KC L
Sbjct: 9 TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSL---------- 58
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSL 118
AR +F+ + Q ++VS+N +I+AYA G + AL L
Sbjct: 59 ---------------------VDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVL 97
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ M + TD T ++ A S +L +++H Y G D + S+ N+L+T Y+R G
Sbjct: 98 YWRMNLQGLGTDHVTFVSVLGACS-SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFG 156
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +AKR+F + + +DE SWN++++A+ Q + AL++F+EM + + T +++
Sbjct: 157 SVGDAKRMFQSL-QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVI 214
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ F++ E L G + HA ++ +GF + + + LI++Y KC G + +VF+++ + D+
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKC-GSSHEAREVFDKMKKRDM 273
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN MI Y Q ++ +AL ++KL+ G+ +FV ++ ACS++ + G+ +H+
Sbjct: 274 VSWNVMIGCYVQNGDFH-EALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLED------------------------------ 387
++ + S ++V ALV MY+KCG+LE+
Sbjct: 333 HILERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGK 391
Query: 388 ----ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVL 442
AR++FDR+ +T+ N+MI Y Q+G + A+++F M + P +TF++VL
Sbjct: 392 DARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVL 451
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
ACA G+++E + + + + E + +I++ R G L +AERL A
Sbjct: 452 EACASLGRLSEVKALHAQISES-ELESNVVVTNTLINMYARCGSLEEAERLFAA 504
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 217/457 (47%), Gaps = 65/457 (14%)
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLH 152
QPD V++ T++ + + CGD +L + +R RF+ D
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTM-------------------- 43
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEVSWNSMVVAYGQHRE 211
V N+L++ Y + L +A+ VF M ++ VSWN+M+ AY Q+
Sbjct: 44 -------------VGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGH 90
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EAL L+ M LG D T S+L A +SL G + H + SG + +
Sbjct: 91 STEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANA 147
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+ +YA+ G + D ++F+ + D WN +I +SQ ++S AL FK++ +
Sbjct: 148 LVTMYARF-GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSG-ALRIFKEM-KCDMK 204
Query: 332 PDDCSFVCVISACSNLSPSL---GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ +++ VIS S +P + G++IHA + S+ + V AL+ MY KCG+ +A
Sbjct: 205 PNSTTYINVISGFS--TPEVLPEGRKIHAEIVANGFDSDLV-VATALINMYGKCGSSHEA 261
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R +FD+M + + VS N MI Y Q+G EAL L++ + T TFVS+L AC+
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV 321
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+A+G+ S + + G + E + ++++ + G L +A ++ AM
Sbjct: 322 KALAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLEEARKVFNAM----------- 369
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ +AV + L YA++G ++ R++
Sbjct: 370 -------KNRDAVAWSTLIGAYASNGYGKDARKARKV 399
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 10/315 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C + L G+ +H+ L+ + ++ + +Y+KCG L A FN
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 61 QHANVFSFNVLLAAYARQ---LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
++ + +++ L+ AYA AR++FD++ D + +N +I+ Y G +A+
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMK 429
Query: 118 LFKDMR-EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+F++M D T ++ AS L +K LH + V N+L+ Y
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+R G L+EA+R+F E K VSW +MV A+ Q+ EAL LFQEM + D T
Sbjct: 490 ARCGSLEEAERLFAAAKE-KTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
SIL T L G ++ + + G + + ++DL + SG + D ++ E +
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGR-SGRLFDAKELLESM 607
Query: 294 P-QPDLVLWNTMISG 307
P +PD V W T ++
Sbjct: 608 PFEPDPVAWMTFLTA 622
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/716 (36%), Positives = 384/716 (53%), Gaps = 79/716 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C R DL TG+++HA + + S +Y KC
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKC------------- 64
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R A AR++FD++P D V++N +++ YA G SA+
Sbjct: 65 ------------------RRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVV 106
Query: 121 DMR--EKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M+ E D TL ++ A ++ L +++H A+ G D +V+ ++L Y +
Sbjct: 107 RMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCK 166
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ A+ VF M +++ VSWN+M+ Y + EA+ LF MV Q G+D+ T AS
Sbjct: 167 CGAVEAARAVFDCM-PVRNSVSWNAMIDGYADNGNATEAMALFWRMV--QEGVDV-TDAS 222
Query: 237 ILTAFTSLEDLVGGL----QFHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFE 291
+L A + +L G L + H L++ G N + + LI YAKC D+ +VF
Sbjct: 223 VLAALQACGEL-GYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADL--AAQVFN 279
Query: 292 EIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-P 349
E+ + + WN MI G++Q E D A F ++ PD + V VI A +++S P
Sbjct: 280 ELGNKKTRISWNAMILGFTQNECPED-AERLFARMQLENVRPDSFTLVSVIPAVADISDP 338
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+ IH +I+ ++ + + V AL+ MYSKCG + ARRLFD + + ++ N+MI G
Sbjct: 339 LQARWIHGYSIRHQLDQD-VYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y HG G A+ LFE M T P TF+SVL+AC+H G V EGQKYF+ MK +G EP
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEP 457
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHF 512
EHY M+DLLGRAGKL +A I+ MP PG +A ++A
Sbjct: 458 GMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQII 517
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+L P V +V+LANIYA + W++VA +R M +G+QK PG+S I++K ++H F +
Sbjct: 518 FELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSG 577
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLS 621
+H K+I+ L ++ ++K GYVPD K + L HSEKLA+A+GL+
Sbjct: 578 STNHQHAKDIYARLAKLIEEIKDMGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAYGLIR 637
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T+ G I + KNLR+C DCHNA K IS + GREI +RD RFH FKDG+CSCGDYW
Sbjct: 638 TAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/723 (36%), Positives = 393/723 (54%), Gaps = 63/723 (8%)
Query: 13 RDLVTGKSLHALYLKNLVP-----------FSAYLSNHFI-----------LLYSKCGCL 50
R+ VT L + Y +N +P F +L N F +L+ + G
Sbjct: 64 RNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQ 123
Query: 51 SAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCG 110
+ A V N L+ YA+ I AR +F + D VS+N++I+
Sbjct: 124 VHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNK 183
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNN 168
E A+ + MR+ F L +++ ++ C++ +Q H I G D SV+N
Sbjct: 184 CFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSN 243
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQL 227
+LL Y+ L E ++VF M E +D+VSWN+++ A + EA+++F EM+
Sbjct: 244 TLLALYAETSRLAECQKVFSWMLE-RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGW 302
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T ++L +SL Q HA ++K ++ I + L+ Y K SG+M +C
Sbjct: 303 SPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGK-SGEMENCE 361
Query: 288 KVFEEIPQP-DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
++F + + D V WN+MISGY E +A+ + + G D +F V+SAC+
Sbjct: 362 EIFSRMSERRDEVSWNSMISGYIHNELLC-KAMDLVWLMMQRGQRLDCFTFATVLSACAT 420
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
++ G ++HA I+ + S+ + + +ALV MYSKCG ++ A R F+ MP N S NS
Sbjct: 421 VATLECGMEVHACAIRACLESD-VVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNS 479
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI+GYA+HG G ALRLF M + P +ITFV VLSAC+H G V EG +YF M +++
Sbjct: 480 MISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVY 539
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-------------------SIAL 506
G P EHYSCM+DLLGRAG+L E I MP P +
Sbjct: 540 GLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGR 599
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
+AA ++P NAV YV+L+N+YA+ GKWE++A RR MR+ V+K+ G SW+ +K +
Sbjct: 600 RAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGV 659
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLA 614
HVFVA D SHP I+ L+E+ +K++ AGYVP +KE+ L +HSEKLA
Sbjct: 660 HVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLA 719
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
VAF +L+ + G PI +MKNLR+CGDCH+A K+IS + R I +RD+ RFH F+DG+CSC
Sbjct: 720 VAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCR 778
Query: 675 DYW 677
DYW
Sbjct: 779 DYW 781
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 231/455 (50%), Gaps = 14/455 (3%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
L+ H F+ +++F N L+ Y R SAR+LFD++P + V++ LIS Y
Sbjct: 24 LNVLKHGFD----SDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQN 79
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGF-DHYAS 165
G E A + K+M + F + F I A ++ +Q+H AI G D +
Sbjct: 80 GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVA 139
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V N L+ Y++ G +D A+ VF M + KD VSWNSM+ Q++ +A++ + M
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVD-KDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
L + L S L++ SL ++ G Q H IK G + + + L+ LYA+ S + +
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETS-RLAE 257
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
C KVF + + D V WNT+I + +A+ F ++ R G+ P+ +F+ +++ S
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVS 317
Query: 346 NLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE-HNTVSL 403
+LS S L QIHAL +K ++ + ++ NAL+A Y K G +E+ +F RM E + VS
Sbjct: 318 SLSTSKLSHQIHALILKYNVKDDN-AIENALLACYGKSGEMENCEEIFSRMSERRDEVSW 376
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
NSMI+GY + + +A+ L M++ TF +VLSACA + G + +
Sbjct: 377 NSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIR 436
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
E + S ++D+ + G++ A R MP
Sbjct: 437 AC-LESDVVIGSALVDMYSKCGRIDYASRFFNLMP 470
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
FH +++K GF + + + LI++Y + GD K+F+E+P + V W +ISGY+Q
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRI-GDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIKIEIRSNRIS 370
D A G K++ G+ P+ +F I AC S L G+Q+H I+ + +++
Sbjct: 81 MPED-ACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVA 139
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N L+ MY+KCG+++ AR +F M + ++VS NSMI G Q+ +A++ + M +T
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQK 456
+ P+N +S LS+CA G + GQ+
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQ 225
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 44/328 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L T +HAL LK V +
Sbjct: 308 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIE----------------------- 344
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLF 119
N LLA Y + + + ++F ++ + D VS+N++IS Y A+ L
Sbjct: 345 --------NALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLV 396
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M ++ D FT + +++A + L ++H AI + + ++L+ YS+
Sbjct: 397 WLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKC 456
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLAS 236
G +D A R F+ + +++ SWNSM+ Y +H G AL+LF M +S QL D T
Sbjct: 457 GRIDYASR-FFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLP-DHITFVG 514
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + + G ++ + + G S ++DL + +G++ ++P
Sbjct: 515 VLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGR-AGELDKIENFINKMPI 573
Query: 295 QPDLVLWNTMIS----GYSQKEEYSDQA 318
+P++++W T++ G +K E +A
Sbjct: 574 KPNILIWRTVLGACCRGNGRKTELGRRA 601
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/740 (34%), Positives = 393/740 (53%), Gaps = 98/740 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ L+ C+ + + GK LH LK + GCL
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILK------------------RGGCL---------- 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F++N+LL Y + + A +LFD++P+ + +S+ TLI YA+ A+ LF
Sbjct: 72 ---DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFV 128
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + + F + ++ + C L +H G + A V +L+ YS G
Sbjct: 129 RLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCG 188
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+ VF + KD VSW MV + ++ EAL+LF +M + + +T AS+
Sbjct: 189 RVDVAREVFDGI-LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVF 247
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A LE G H +KS + + ++G L+DLY K SGD+ D + FEEIP+ D+
Sbjct: 248 KACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTK-SGDIDDARRAFEEIPKKDV 306
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W+ MI+ Y+Q ++ S +A+ F ++ + P+ +F V+ AC+ + +LG QIH
Sbjct: 307 IPWSFMIARYAQSDQ-SKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHC 365
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IKI + S+ + V+NAL+ +Y+KCG +E++ LF P N V+ N++I G+ Q G G
Sbjct: 366 HVIKIGLHSD-VFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGE 424
Query: 418 EALRLFEWMLE-------------------------------TNIPPTNITFVSVLSACA 446
+ALRLF MLE + P +TFV VLSACA
Sbjct: 425 KALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACA 484
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
+ G + +GQ YF+ M G EP EHY+CM+ LLGR G L A +LI+ +PF P +
Sbjct: 485 NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVW 544
Query: 507 KA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A A L++EP + +V+L+N+YA + +W+ VA++R+ M+ +
Sbjct: 545 RALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRK 604
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--------- 600
GV+K+PG SWIE + +H F D SHP ++ I+ LE + K K+AGY+P
Sbjct: 605 GVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDV 664
Query: 601 ---DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
+KE+ L HSE+LA++FG++ T G PI +MKNLRIC DCH AIK IS + REI V
Sbjct: 665 EDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVV 724
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F++G CSCGDYW
Sbjct: 725 RDINRFHHFQEGLCSCGDYW 744
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/620 (39%), Positives = 358/620 (57%), Gaps = 37/620 (5%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLI 148
+PQ +LVS+ +IS + A+ F MR F S I AS ++ +
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQ+HCLA+ G V ++L YS+ G + +A +VF EM KDEVSW +M+ Y +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM-PCKDEVSWTAMIDGYSK 119
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
E EAL F++M+ ++ +D + L S L A +L+ G H+ ++K GF + +
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179
Query: 269 GSGLIDLYAKCSGDMRDCMKVFE-EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
G+ L D+Y+K +GDM VF + ++V + +I GY + E+ ++ L F +L R
Sbjct: 180 GNALTDMYSK-AGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQI-EKGLSVFVELRR 237
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P++ +F +I AC+N + G Q+HA +KI + V++ LV MY KCG LE
Sbjct: 238 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF-VSSILVDMYGKCGLLE 296
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A + FD + + ++ NS+++ + QHG+G +A+++FE M++ + P ITF+S+L+ C+
Sbjct: 297 QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 356
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
H G V EG YF M +G P EHYSC+IDLLGRAG+L +A+ I MPF P +
Sbjct: 357 HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+ AA ++LEP N+ V+L+NIYA +WE+V ++R MRD
Sbjct: 417 CSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDG 476
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
V+K PG+SW++V + HVF AED SHP I+ L+ + ++K AGYVP
Sbjct: 477 NVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDM 536
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KEK L HSE++AVAF L+S G+PI+V KNLR+C DCH+AIKFIS + GR+I V
Sbjct: 537 DDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIV 596
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F DG CSCGDYW
Sbjct: 597 RDNSRFHHFTDGSCSCGDYW 616
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 185/422 (43%), Gaps = 45/422 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F ++ C + GK +H L LK + ++ ++ +YSKCG +
Sbjct: 43 AFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAM---------- 92
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++F+++P D VS+ +I Y+ G+ E AL FK
Sbjct: 93 ---------------------FDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 131
Query: 121 DMREKRFDTDGFTL-SGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ D L S L + C + +H + GF+ V N+L YS+ G
Sbjct: 132 KMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 191
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A VF E ++ VS+ ++ Y + + + L +F E+ + + +T +S++
Sbjct: 192 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLI 251
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G Q HA ++K F ++ + S L+D+Y KC G + ++ F+EI P
Sbjct: 252 KACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC-GLLEQAIQAFDEIGDPTE 310
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
+ WN+++S + Q D A+ F+++ G P+ +F+ +++ CS+ G L
Sbjct: 311 IAWNSLVSVFGQHGLGKD-AIKIFERMVDRGVKPNAITFISLLTGCSH----AGLVEEGL 365
Query: 359 TIKIEIRSNRISVN-----NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQ 412
+ V + ++ + + G L++A+ +RMP E N S +
Sbjct: 366 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 425
Query: 413 HG 414
HG
Sbjct: 426 HG 427
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/635 (38%), Positives = 380/635 (59%), Gaps = 44/635 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ SA ++F+++P+ + V++ +I+ G A+ LF +M ++ D FTLSG+I+A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 141 SSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKD 195
+N L L +QLH AI G V L+ Y++ +G + A+++F ++ + +
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILD-HN 339
Query: 196 EVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
SW +M+ Y G + E EAL LF+ M+ + + +T +S L A +L L G Q
Sbjct: 340 VFSWTAMITGYVQKGGYDE--EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQ 397
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
H +K GF + + + LI +YA+ SG + D K F+ + + +L+ +NT+I Y+ K
Sbjct: 398 VFTHAVKLGFSSVNCVANSLISMYAR-SGRIDDARKAFDILFEKNLISYNTVIDAYA-KN 455
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISV 371
S++AL F ++ G +F ++S +++ + G+QIHA IK ++ N+ SV
Sbjct: 456 LNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQ-SV 514
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
NAL++MYS+CGN+E A ++F+ M + N +S S+I G+A+HG +AL LF MLE +
Sbjct: 515 CNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P +T+++VLSAC+H G V EG K+F M G P EHY+CM+D+LGR+G L++A
Sbjct: 575 RPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAI 634
Query: 492 RLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASG 534
+ I +MP+ ++ + AA ++ EP + Y++L+N+YA++
Sbjct: 635 QFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTS 694
Query: 535 KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
KW+EV+ IR+ M+++ + K+ G SW+EV+ ++H F D SHP EI++ L+ +S K+K
Sbjct: 695 KWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754
Query: 595 QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHN 642
+ GYVP+ KEK L HSEK+AVAFGL+STS +PI V KNLRICGDCH+
Sbjct: 755 KLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHS 814
Query: 643 AIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
AIK+IS GREI VRD RFH KDGRCSC +YW
Sbjct: 815 AIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 237/494 (47%), Gaps = 52/494 (10%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISA 105
+S H +Q H ++ ++++ L R + +++ Q DL V+ N+LIS
Sbjct: 51 ISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL 110
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL-------------- 151
Y+ CG E A S+F+ M R D + S +++ +NN + L
Sbjct: 111 YSKCGQWEKATSIFQLMGSSR---DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 152 -HCLAI---YCGFDHYASVNNSLLTCYSRNGFLD---------------------EAKRV 186
+C A C + SV +S+ + G+L A +V
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKV 227
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M E ++ V+W M+ Q EA+ LF EM+ D +TL+ +++A ++E
Sbjct: 228 FEKMPE-RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMEL 286
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM--KVFEEIPQPDLVLWNTM 304
L+ G Q H+ I+ G + +G LI++YAKCS D C K+F++I ++ W M
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I+GY QK Y ++AL F+ + P+ +F + AC+NL+ +G+Q+ +K+
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S V N+L++MY++ G ++DAR+ FD + E N +S N++I YA++ EAL LF
Sbjct: 407 FSSVN-CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ + + + TF S+LS A G + +G++ + + G + + +I + R
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSR 524
Query: 484 AGKLTDAERLIEAM 497
G + A ++ E M
Sbjct: 525 CGNIESAFQVFEDM 538
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 201/390 (51%), Gaps = 27/390 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSL++ YS+ G ++A +F MG +D +SW++MV + + G AL F +M+
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH-IGSGLIDLYAKCSGDMRDC 286
+ Y A+ A ++ E + G ++K+G+ Q+ +G GLID++ K GD+
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
KVFE++P+ + V W MI+ Q Y+ +A+ F ++ GY PD + VISAC+N
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQF-GYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283
Query: 347 LS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC---GNLEDARRLFDRMPEHNTVS 402
+ LG+Q+H+ I+ + +R V L+ MY+KC G++ AR++FD++ +HN S
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDR-CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342
Query: 403 LNSMIAGYAQH-GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+MI GY Q G EAL LF M+ T++ P + TF S L ACA+ + G++ F+
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHA 402
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAV 521
+ GF + +I + R+G++ DA + + L N +
Sbjct: 403 VKL-GFSSVNCVANSLISMYARSGRIDDARKAFDI------------------LFEKNLI 443
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGV 551
Y + + YA + EE + + D+G+
Sbjct: 444 SYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 144/283 (50%), Gaps = 15/283 (5%)
Query: 36 LSNHFIL--LYSKCGCLSAAHHAFNQTQHANVFSF-------NVLLAAYARQLRIASARQ 86
+ NHF C L+A HA F N L++ YAR RI AR+
Sbjct: 373 IPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNN 144
FD + + +L+SYNT+I AYA ++E AL LF ++ ++ FT + L++ AS
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+ +Q+H I G SV N+L++ YSR G ++ A +VF +M E ++ +SW S++
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM-EDRNVISWTSIIT 551
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFH 263
+ +H +AL+LF +M+ + ++ T ++L+A + + + G + F + + G
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ ++D+ + SG + + ++ +P + D ++W T +
Sbjct: 612 PRMEHYACMVDILGR-SGSLSEAIQFINSMPYKADALVWRTFL 653
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 5/249 (2%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
+A+ + MV D+ T + L G H L +S +S + LI
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 274 DLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
LY+KC G +F+ + DL+ W+ M+S ++ +AL F + GY+P
Sbjct: 109 SLYSKC-GQWEKATSIFQLMGSSRDLISWSAMVSCFANN-NMGFRALLTFVDMIENGYYP 166
Query: 333 DDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC-GNLEDARR 390
++ F ACS S+G I +K + + V L+ M+ K G+L A +
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFK 226
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+F++MPE N V+ MI Q G EA+ LF M+ + P T V+SACA+
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMEL 286
Query: 451 VAEGQKYFS 459
+ GQ+ S
Sbjct: 287 LLLGQQLHS 295
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 39/258 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L + G+ +HA +K+ + + + N I +YS+CG + +A F
Sbjct: 479 TFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++ +A+ A +LF ++ + P+LV+Y ++SA + G
Sbjct: 539 EDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGW 598
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M +T G+I +HYA + + L R
Sbjct: 599 KHFKSM---------YTEHGVIPR-------------------MEHYACMVDIL----GR 626
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD--MYTL 234
+G L EA + M D + W + + A H LE + +M+ Q D Y L
Sbjct: 627 SGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN-LELGKHAAKMIIEQEPHDPAAYIL 685
Query: 235 ASILTAFTSLEDLVGGLQ 252
S L A TS D V ++
Sbjct: 686 LSNLYASTSKWDEVSNIR 703
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/641 (37%), Positives = 362/641 (56%), Gaps = 37/641 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I AR +FD + D++S+N ++ A G A ++F M+++
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLV 521
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T L+ S++ L + ++H A+ G V ++ + Y R G +D+A+ +
Sbjct: 522 PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLL 581
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F ++ ++ +WN+M+ Q R G EAL LF +M D T +IL+A E
Sbjct: 582 FDKL-SVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEA 640
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L + H+H +G + +G+ L+ Y+KC G+++ +VF+++ + ++ W MI
Sbjct: 641 LEWVKEVHSHATDAGL-VDLRVGNALVHTYSKC-GNVKYAKQVFDDMVERNVTTWTMMIG 698
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
G +Q D A F ++ R G PD ++V ++SAC++ K++H + +
Sbjct: 699 GLAQHGCGHD-AFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLV 757
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V NALV MY+KCG+++DAR +FD M E + S MI G AQHG G+EAL F
Sbjct: 758 SD-LRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVK 816
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M P ++V+VL+AC+H G V EG++ F M +G EP EHY+CM+DLLGRAG
Sbjct: 817 MKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAG 876
Query: 486 KLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSNAVPYVMLAN 528
L +AE I MP P G++ + AA L+L+P +A YV+L+N
Sbjct: 877 LLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSN 936
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYAA+GKWE+ +R +M+ +G++K+PG SWIEV ++H FV D SHP KEI+ L +
Sbjct: 937 IYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLND 996
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ ++K GYVPD KE+ L HSEKLA+ +GL+ T +PI V KNLR+
Sbjct: 997 LIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRV 1056
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH A KFIS I GREI RD RFH FKDG CSCGDYW
Sbjct: 1057 CSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 220/448 (49%), Gaps = 11/448 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA N ++ N L+ YA+ I AR +FD + + D+ S+ +I A G +
Sbjct: 345 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQE 404
Query: 115 ALSLFKDMREK----RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
A SLF M+ T L+ AS++ L +K +H A GF + N+L
Sbjct: 405 AFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNAL 464
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y++ G +D+A+ VF M + +D +SWN+M+ Q+ G EA +F +M L D
Sbjct: 465 IHMYAKCGSIDDARLVFDGMCD-RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPD 523
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T S+L S + L + H H +++G + +GS I +Y +C G + D +F
Sbjct: 524 STTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC-GSIDDARLLF 582
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSP 349
+++ + WN MI G +Q + +AL F ++ R G+ PD +F+ ++SA +
Sbjct: 583 DKLSVRHVTTWNAMIGGAAQ-QRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL 641
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
K++H+ + R V NALV YSKCGN++ A+++FD M E N + MI G
Sbjct: 642 EWVKEVHSHATDAGLVDLR--VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGG 699
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
AQHG G +A F ML I P T+VS+LSACA TG + E K G
Sbjct: 700 LAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGAL-EWVKEVHNHAVSAGLVS 758
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + ++ + + G + DA + + M
Sbjct: 759 DLRVGNALVHMYAKCGSIDDARSVFDDM 786
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 225/452 (49%), Gaps = 38/452 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ +L+ C+ + D++ K +H +K+ + + Y++N + +Y +CG
Sbjct: 120 SYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCG------------ 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ ARQ+FD++ + ++ + T+I YA+ G E A+ ++
Sbjct: 168 -------------------RLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYD 208
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR++ + T ++ A NL K++H I GF V +L+ Y + G
Sbjct: 209 KMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCG 268
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ +F +M E ++ +SW M+ + G EA LF +M + YT SIL
Sbjct: 269 SIEDAQLIFDKMVE-RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSIL 327
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A S L + H+H + +G + +G+ L+ +YAK SG + D VF+ + + D+
Sbjct: 328 NANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK-SGSIDDARVVFDGMTERDI 386
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
W MI G +Q +A F ++ R G P+ +++ +++A + S S + + +
Sbjct: 387 FSWTVMIGGLAQHGR-GQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445
Query: 359 TIKIEIRS--NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
E + + + NAL+ MY+KCG+++DAR +FD M + + +S N+M+ G AQ+G G
Sbjct: 446 HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
EA +F M + + P + T++S+L+ T
Sbjct: 506 HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGST 537
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 222/460 (48%), Gaps = 25/460 (5%)
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
+ A+++ K ++ D F+ ++ ++ L KQ+H I G + V N L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y R G L A++VF ++ + K+ W +M+ Y ++ +A++++ +M +
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLK-KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T SIL A +L G + HAH+I+SGF + + + L+++Y KC G + D +F
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKC-GSIEDAQLIF 277
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSP 349
+++ + +++ W MI G + +A F ++ R G+ P+ ++V +++A S +
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGR-GQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
K++H+ + + + + V NALV MY+K G+++DAR +FD M E + S MI G
Sbjct: 337 EWVKEVHSHAVNAGLALD-LRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA-EGQKYFSMMKDMFGFE 468
AQHG G EA LF M P T++S+L+A A A E K + GF
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI 455
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAM------PFNP--GSIALKAANH-----FLQL 515
+ + +I + + G + DA + + M +N G +A H FLQ+
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQM 515
Query: 516 EPSNAVP----YVMLANIYAASGKWEEVATIRRLMRDRGV 551
+ VP Y+ L N + ++ E V + + + G+
Sbjct: 516 QQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL 555
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/646 (37%), Positives = 365/646 (56%), Gaps = 36/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F L+ YAR A Q+F ++ Q +L++++ +I+A+AD G AL F+ M+
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 124 EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
++ + T L+ + + L + ++H L G D ++ N+L+ Y R D
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A+ VF ++ E+ + +SWNSM+ Y Q +ALQLF+ M + D +IL A
Sbjct: 415 DARTVFDQL-ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC 473
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T H + +SG + + + L+++YAK +G++ + +E+ + + W
Sbjct: 474 TIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAK-AGELDVAEVILQEMDEQQITAW 532
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTI 360
N +I+GY+ S +AL ++KL D +F+ V++AC S+ S + GK IH+ +
Sbjct: 533 NVLINGYALHGR-SREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 591
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + S+ I V NAL MYSKCG++E+ARR+FD MP + VS N M+ YAQHG E L
Sbjct: 592 ECGLDSDVI-VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 650
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+L M + + ITFVSVLS+C+H G +AEG +YF + G E + EHY C++DL
Sbjct: 651 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 710
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPY 523
LGRAGKL +AE+ I MP PG + AA L+L+P N+
Sbjct: 711 LGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSAS 770
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+NIY+ G W+ A +RR M R V+K PG S I+VK ++H F D SHP EI+
Sbjct: 771 VVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIY 830
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
+ +EE+ M++AGYVPD KE L +HSEKLA+AFGL+ST + +
Sbjct: 831 DKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIF 890
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH A KFIS I GREI VRD +RFH F+DG CSC DYW
Sbjct: 891 KNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 239/516 (46%), Gaps = 62/516 (12%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVS 98
+YS+CG L A AF + + NV S+NV+++AY+ A LF + P+ +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAI- 59
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC 158
TL++ CG F+++R DG +H L++
Sbjct: 60 --TLVAVLNSCGS-------FRELR------DGIL-----------------VHALSLER 87
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE-ALQ 217
GF V +LL Y + G L +A+ VF EM E K+ V+WN+M+ Y + A++
Sbjct: 88 GFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE-KNVVTWNAMLGVYSLQGCCWKLAVE 146
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF M+ + ++ T ++L + + L G H+ + +S + + + L++ Y
Sbjct: 147 LFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYT 206
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC G + D KVF+ +P + WN+MIS YS E S +A F+++ + G D +F
Sbjct: 207 KC-GSLTDARKVFDGMPCRSVGTWNSMISAYSISER-SGEAFFIFQRMQQEGERCDRVTF 264
Query: 338 VCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ ++ AC N GK + + + + V AL+ MY++C + EDA ++F RM
Sbjct: 265 LSILDACVNPETLQHGKHVRESISETSFELD-LFVGTALITMYARCRSPEDAAQVFGRMK 323
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ N ++ +++I +A HG EALR F M + I P +TF+S+L+ + E +
Sbjct: 324 QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR 383
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLE 516
++ + G + + ++++ GR DA + F QLE
Sbjct: 384 IHLLITE-HGLDDTTTMRNALVNVYGRCESPDDARTV------------------FDQLE 424
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
N + + + IY + ++ + R M+ +G+Q
Sbjct: 425 LPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQ 460
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 229/505 (45%), Gaps = 48/505 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +C R+L G +HAL L+ + ++ + +Y KCG L A F +
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 61 QHANVFSFNVLLAAYARQ---LRIAS---ARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
NV ++N +L Y+ Q ++A R L + + + N L S
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSV--------- 170
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
D D I + C+ + H L ++ VN +L+ Y
Sbjct: 171 ------------VDPDALRKGKFIHS-----CVRESEHSLDVF--------VNTALVNTY 205
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G L +A++VF M + +WNSM+ AY EA +FQ M D T
Sbjct: 206 TKCGSLTDARKVFDGM-PCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTF 264
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
SIL A + E L G + ++ F + +G+ LI +YA+C D +VF +
Sbjct: 265 LSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSP-EDAAQVFGRMK 323
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
Q +L+ W+ +I+ ++ + +AL F+ + + G P+ +F+ +++ + +PS ++
Sbjct: 324 QTNLITWSAIITAFAD-HGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT--TPSGLEE 380
Query: 355 IHALTIKIEIRS--NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ + + I + ++ NALV +Y +C + +DAR +FD++ N +S NSMI Y Q
Sbjct: 381 LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQ 440
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+AL+LF M + I P + F+++L AC G +K + G
Sbjct: 441 CERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPL 499
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++++ +AG+L AE +++ M
Sbjct: 500 VQTSLVNMYAKAGELDVAEVILQEM 524
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 198/415 (47%), Gaps = 38/415 (9%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YSR G L +A F ++ ++ VSWN M+ AY ++ EAL LF M+ + + T
Sbjct: 2 YSRCGSLGDAVAAFGKI-RARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L ++L + S +L G+ HA ++ GF QN+ + + L+++Y KC G + D VFEE+
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKC-GTLLDAQSVFEEM 119
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-- 351
+ ++V WN M+ YS + A+ F ++ G + +F+ V++ S + P
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLN--SVVDPDALR 177
Query: 352 -GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
GK IH+ + E S + VN ALV Y+KCG+L DAR++FD MP + + NSMI+ Y
Sbjct: 178 KGKFIHSCVRESE-HSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 236
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
+ EA +F+ M + +TF+S+L AC + + G+ + + FE +
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET-SFELD 295
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
+ +I + R D AA F +++ +N + + + +
Sbjct: 296 LFVGTALITMYARCRSPED------------------AAQVFGRMKQTNLITWSAIITAF 337
Query: 531 AASGKWEEVATIRRLMRDRGVQKKP--------GF---SWIEVKKQMHVFVAEDG 574
A G E R+M+ G+ GF S +E ++H+ + E G
Sbjct: 338 ADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 392
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 34/208 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L GK +H+ ++ + + N +YSKCG +
Sbjct: 566 TFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSME--------- 616
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+AR++FD +P VS+N ++ AYA G++E L L +
Sbjct: 617 ----------------------NARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIR 654
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M ++ +G T ++++ S+ + + H L G + L+ R
Sbjct: 655 KMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRA 714
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G L EA++ +M V+W S++ A
Sbjct: 715 GKLQEAEKYISKMPLEPGIVTWASLLGA 742
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/664 (36%), Positives = 369/664 (55%), Gaps = 49/664 (7%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
L A F+Q +V + ++L AYA+ R+ A LF +IP D+VS+N++I C
Sbjct: 71 LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHC 130
Query: 110 GDTESALSLFKDMREKRFDT-----DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA 164
GD +A LF +M + + DG G++ + ++ + D
Sbjct: 131 GDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPM---------DRDV 181
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
+ N+++ Y NG +D+A ++F +M +D +SW+SM+ + + +AL LF++MV+
Sbjct: 182 AAWNAMIHGYCSNGRVDDALQLFCQMPS-RDVISWSSMIAGLDHNGKSEQALVLFRDMVA 240
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDM 283
+ L L L+A + G+Q H + K G +H + + + L+ YA C M
Sbjct: 241 SGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCK-QM 299
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+VF E+ +V+W +++GY +++ +AL F ++ R+ P++ SF +++
Sbjct: 300 EAACRVFGEVVYKSVVIWTALLTGYGLNDKHR-EALEVFGEMMRIDVVPNESSFTSALNS 358
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C L GK IHA +K+ + S V +LV MYSKCG + DA +F + E N VS
Sbjct: 359 CCGLEDIERGKVIHAAAVKMGLESGGY-VGGSLVVMYSKCGYVSDAVYVFKGINEKNVVS 417
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
NS+I G AQHG GM AL LF ML + P IT +LSAC+H+G + + + +F
Sbjct: 418 WNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFG 477
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
EHY+ M+D+LGR G+L +AE ++ +MP S +A
Sbjct: 478 QKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLA 537
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+AAN ++EP + YV+L+N+YA+S +W EVA IRR M+ GV KKPG SW+ +K Q
Sbjct: 538 KRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQ 597
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
H F++ D SHP+ ++I+ LE + K+K+ GYVPD KE+ L +HSE+L
Sbjct: 598 KHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERL 657
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGLLST G I VMKNLR+CGDCHNAIK ++ I REI VRD+ RFH FK+G CSC
Sbjct: 658 AIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSC 717
Query: 674 GDYW 677
GDYW
Sbjct: 718 GDYW 721
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 44/217 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L +C G D+ GK +HA +K + Y+ +++YSKCG +S A + F
Sbjct: 351 SFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGI 410
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV VS+N++I A G AL+LF
Sbjct: 411 NEKNV-------------------------------VSWNSVIVGCAQHGCGMWALALFN 439
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG--------FDHYASVNNSLLT 172
M + D DG T++GL++A S++ ++++ C Y G +HY S+ + L
Sbjct: 440 QMLREGVDPDGITVTGLLSACSHS-GMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGR 498
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
C G L+EA+ V M + + W +++ A +H
Sbjct: 499 C----GELEEAEAVVMSMPMKANSMVWLALLSACRKH 531
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/634 (38%), Positives = 376/634 (59%), Gaps = 42/634 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR-EKRFDTDGFTLSGLIT 139
+ SAR++FD++ + ++V++ +I+ A G + A+ LF +M + D FTL+GLI+
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270
Query: 140 --ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A L L K+LH I G V SL+ Y++ G + EA++VF M E + +
Sbjct: 271 VCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE-HNVM 329
Query: 198 SWNSMVVAYGQHREGLE--ALQLFQEMVSLQLGL--DMYTLASILTAFTSLEDLVGGLQF 253
SW ++V Y + G E A+++F M+ LQ G+ + +T + +L A SL D G Q
Sbjct: 330 SWTALVNGYVRGGGGYEREAMRMFSNML-LQGGVAPNCFTFSGVLKACASLPDFDFGEQV 388
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H IK G +G+GL+ +YAK SG M K F+ + + +LV T++ + K+
Sbjct: 389 HGQTIKLGLSAIDCVGNGLVSVYAK-SGRMESARKCFDVLFEKNLVS-ETVVDDTNVKDF 446
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN 372
+ +++ VG ++ ++S + + + G+QIHA+ +KI R++ +SVN
Sbjct: 447 NLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD-LSVN 505
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
NAL++MYSKCGN E A ++F+ M + N ++ S+I G+A+HG +AL LF MLET +
Sbjct: 506 NALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVK 565
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P ++T+++VLSAC+H G + E K+F+ M+D G P EHY+CM+DLLGR+G L++A
Sbjct: 566 PNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIE 625
Query: 493 LIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGK 535
I +MPF+ ++ + AA L+ EP + Y++L+N+YA G+
Sbjct: 626 FINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGR 685
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
WE+VA IR+ M+ + + K+ G SWIEV+ Q+H F D HP ++I+ L+E++ K+K
Sbjct: 686 WEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKN 745
Query: 596 AGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GYVP+ KE+ L HSEKLAVAF L+ST +PI V KNLR+CGDCH A
Sbjct: 746 VGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTA 805
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IK+IS ++GREI VRD RFH KDG CSC DYW
Sbjct: 806 IKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 136/321 (42%), Gaps = 61/321 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C D G+ +H +K L S C+
Sbjct: 368 TFSGVLKACASLPDFDFGEQVHGQTIK--------------LGLSAIDCVG--------- 404
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N L++ YA+ R+ SAR+ FD + + +LVS + + S L +
Sbjct: 405 --------NGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDR 456
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ FT + L++ ++ + +Q+H + + GF SVNN+L++ YS+ G
Sbjct: 457 EVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCG 516
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A +VF +M E + ++W S++ + +H +AL+LF M+ + + T ++L
Sbjct: 517 NKEAALQVFNDM-EDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVL 575
Query: 239 TA-------------FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+A FTS+ D G + H + ++DL + SG + +
Sbjct: 576 SACSHVGLIDEAWKHFTSMRDNHGIVPRMEHY------------ACMVDLLGR-SGLLSE 622
Query: 286 CMKVFEEIP-QPDLVLWNTMI 305
++ +P D ++W T +
Sbjct: 623 AIEFINSMPFDADALVWRTFL 643
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE--EIPQPDLVLWNTMISG 307
G H L S ++ + + LI LY+K S D +F+ E + D+V ++++IS
Sbjct: 71 GKLLHHKLTTSNLPLDTLLLNSLITLYSK-SNDPITAFSIFQSMENSKRDVVSYSSIISC 129
Query: 308 YSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
++ +A+ F +L + G +P++ F VI AC G + +K
Sbjct: 130 FANNRN-CLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYF 188
Query: 366 SNRISVNNALVAMYSK---CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ + V L+ M+ K +LE AR++FD+M E N V+ MI AQ+G EA+ L
Sbjct: 189 DSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDL 248
Query: 423 F-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
F E ++ + P T ++S CA ++ G++ S + G + ++D+
Sbjct: 249 FLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS-GLVLDLCVGCSLVDMY 307
Query: 482 GRAGKLTDAERLIEAM 497
+ G + +A ++ + M
Sbjct: 308 AKCGLVQEARKVFDGM 323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 38/206 (18%)
Query: 9 CVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSF 68
C+G + G+ +HA+ +K ++N I +YSKCG AA FN + NV ++
Sbjct: 479 CIGT--IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITW 536
Query: 69 NVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
++ +A+ + A +LF + +P+ V+Y ++SA + G + A F MR+
Sbjct: 537 TSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRD 596
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
I +HYA + + L R+G L EA
Sbjct: 597 NH----------------------------GIVPRMEHYACMVDLL----GRSGLLSEAI 624
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHR 210
M D + W + + + HR
Sbjct: 625 EFINSMPFDADALVWRTFLGSCRVHR 650
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 367/647 (56%), Gaps = 41/647 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N N L+AAY + + SA LFD++ +PD+VS+N++I+ G + + L +F M
Sbjct: 503 SNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 562
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ D TL ++ A +N NL L + LH + F +N+LL YS+ G L
Sbjct: 563 LILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 622
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASIL 238
+ A VF +MG+ VSW S + AY REGL +A+ LF EM S + D+YT+ SI+
Sbjct: 623 NGATEVFVKMGDTTI-VSWTSTIAAY--VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 679
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L G H+++IK+G N + + LI++YAKC G + + VF +IP D+
Sbjct: 680 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKC-GSVEEARLVFSKIPVKDI 738
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WNTMI GYSQ ++AL F + + + PDD + CV+ AC+ L+ G++IH
Sbjct: 739 VSWNTMIGGYSQNS-LPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHG 796
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ S+ + V ALV MY+KCG L A+ LFD +P+ + +S MIAGY HG G
Sbjct: 797 HILRRGYFSD-LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGN 855
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EA+ F M I P +F +L+AC+H+G + EG K+F+ M++ G EP+ EHY+C+
Sbjct: 856 EAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACV 915
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLL R G L+ A + IE+MP P + +A K A H +LEP N
Sbjct: 916 VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNT 975
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+LAN+YA + KWEEV +R+ M+ RG ++ PG SWIEV + ++FVA + HP K
Sbjct: 976 RYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAK 1035
Query: 581 EIHNYLEEMSRKMKQAGYVP----------DKEKRLVH--HSEKLAVAFGLLSTSYGEPI 628
I L +++ +M+ Y D EK ++ HSEK A+AFG+L+ G +
Sbjct: 1036 RIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTV 1095
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KN R+CGDCH KF+S REI +RD+ RFH FKDG CSC D
Sbjct: 1096 RVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 352 GKQIHALTIKIEIRSNRISVNNAL----VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
GK++H++ I SN IS++ AL V MY CG+L R++FD++ N ++
Sbjct: 388 GKRVHSVII-----SNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLM 442
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ YA+ G E++ LF+ M + + TF VL A GKV E ++
Sbjct: 443 SEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 41/271 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G L G+ +H L+ +++ + +Y+KCG L A F+
Sbjct: 774 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 833
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
++ S+ V++A Y A F+++ +PD S++ +++A + G
Sbjct: 834 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGW 893
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR N C ++ +HYA V + L +R
Sbjct: 894 KFFNSMR--------------------NECGVEP--------KLEHYACVVDLL----AR 921
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY--TL 234
G L +A + M D W ++ H + A ++ + + L+ Y L
Sbjct: 922 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 981
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
A++ E++ + + K GF QN
Sbjct: 982 ANVYAEAEKWEEVK---KLRKRMQKRGFKQN 1009
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/646 (38%), Positives = 364/646 (56%), Gaps = 36/646 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N+F +++ YA+ +I +A ++F+++ DLVS+ TL++ YA G + AL L M
Sbjct: 178 SNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQM 237
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+E D TL ++ A ++ L + + +H A GF+ +V N+LL Y + G
Sbjct: 238 QEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSA 297
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ VF M K VSWN+M+ Q+ E EA F +M+ T+ +L A
Sbjct: 298 RIARLVFKGMRS-KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLA 356
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+L DL G H L K N + + LI +Y+KC + +F + + + V
Sbjct: 357 CANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCK-RVDIAASIFNNLEKTN-VT 414
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALT 359
WN MI GY+Q +AL F + G D + V VI+A ++ S + K IH L
Sbjct: 415 WNAMILGYAQNG-CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLA 473
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
++ N + V+ ALV MY+KCG ++ AR+LFD M E + ++ N+MI GY HG+G E
Sbjct: 474 VR-ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKET 532
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF M + + P +ITF+SV+SAC+H+G V EG F M++ + EP +HYS M+D
Sbjct: 533 LDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVD 592
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVP 522
LLGRAG+L DA I+ MP PG L KAA +L+P
Sbjct: 593 LLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGY 652
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
+V+LANIYA++ W++VA +R M D+G+ K PG SW+E++ ++H F + +HP K+I
Sbjct: 653 HVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKI 712
Query: 583 HNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
+ +LE + ++K AGYVPD K++ L HSE+LA+AFGLL+TS G + +
Sbjct: 713 YAFLETLGDEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIR 772
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH+ K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 773 KNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 191/404 (47%), Gaps = 25/404 (6%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
Q+ I GF + +++ + + G EA RVF E E+K +V ++ M+ Y ++
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVF-EHVELKLDVLYHIMLKGYAKN 123
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+AL F M+ ++ L + A +L DL G + H +I +GF N +
Sbjct: 124 SSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVM 183
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ ++ LYAKC + + K+FE + DLV W T+++GY+Q ++ +AL ++ G
Sbjct: 184 TAVMSLYAKCR-QIDNAYKMFERMQHKDLVSWTTLVAGYAQ-NGHAKRALQLVLQMQEAG 241
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
PD + V ++ A +++ +G+ IH + S ++V NAL+ MY KCG+ A
Sbjct: 242 QKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFES-LVNVTNALLDMYFKCGSARIA 300
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R +F M VS N+MI G AQ+G EA F ML+ PT +T + VL ACA+
Sbjct: 301 RLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANL 360
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
G + G + + D + + +I + + ++ A
Sbjct: 361 GDLERGW-FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVD------------------IA 401
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
A+ F LE +N M+ YA +G +E + +M+ +G++
Sbjct: 402 ASIFNNLEKTNVTWNAMILG-YAQNGCVKEALNLFCMMQSQGIK 444
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 44/312 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C DL G +H L K + + + N I +YSKC + A FN
Sbjct: 349 TMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL 408
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV ++N +I YA G + AL+LF
Sbjct: 409 EKTNV--------------------------------TWNAMILGYAQNGCVKEALNLFC 436
Query: 121 DMREKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M+ + D FTL G+ITA S N K +H LA+ D+ V+ +L+ Y++
Sbjct: 437 MMQSQGIKLDCFTLVGVITALADFSVNRQA--KWIHGLAVRACMDNNVFVSTALVDMYAK 494
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A+++F M E + ++WN+M+ YG H G E L LF EM + + T S
Sbjct: 495 CGAIKTARKLFDMMQE-RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLS 553
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNS--HIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+++A + + GL + + + + + H S ++DL + +G + D +E+P
Sbjct: 554 VISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHY-SAMVDLLGR-AGQLDDAWNFIQEMP 611
Query: 295 -QPDLVLWNTMI 305
+P + + M+
Sbjct: 612 IKPGISVLGAML 623
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/634 (38%), Positives = 379/634 (59%), Gaps = 42/634 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ SA ++F+++P+ + V++ +I+ G A+ LF DM ++ D FTLSG+I+A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 141 SSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKD 195
+N L L +QLH AI G V L+ Y++ +G + A+++F ++ + +
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILD-HN 339
Query: 196 EVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
SW +M+ Y Q + G EAL LF+ M+ + + +T +S L A +L L G Q
Sbjct: 340 VFSWTAMITGYVQ-KGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H +K GF + + + LI +YA+ SG + D K F+ + + +L+ +NT+I Y+ K
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYAR-SGRIDDARKAFDILFEKNLISYNTVIDAYA-KNL 456
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN 372
S++AL F ++ G +F ++S +++ + G+QIHA IK ++ N+ SV
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQ-SVC 515
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
NAL++MYS+CGN+E A ++F+ M + N +S S+I G+A+HG +AL LF MLE +
Sbjct: 516 NALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P +T+++VLSAC+H G V EG K+F M G P EHY+C++D+LGR+G L++A +
Sbjct: 576 PNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQ 635
Query: 493 LIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGK 535
I +MP+ ++ + AA ++ EP + Y++L+N+YA+ K
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISK 695
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
W+EV+ IR+ M+++ + K+ G SW+EV+ ++H F D SHP EI++ L+ +S K+K+
Sbjct: 696 WDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKK 755
Query: 596 AGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GYVP+ KEK L HSEK+AVAFGL+STS +PI V KNLRICGDCH+A
Sbjct: 756 LGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSA 815
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IK+IS GREI VRD RFH KDGRCSC +YW
Sbjct: 816 IKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 237/494 (47%), Gaps = 52/494 (10%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISA 105
+S H +Q H ++ ++++ L R + +++ Q DL V+ N+LIS
Sbjct: 51 ISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL 110
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL-------------- 151
Y+ CG E A S+F+ M R D + S +++ +NN + L
Sbjct: 111 YSKCGQWEKATSIFRLMGSSR---DLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 152 -HCLAI---YCGFDHYASVNNSLLTCYSRNGFLD---------------------EAKRV 186
+C A C + SV +S+ + G+L A +V
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKV 227
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M E ++ V+W M+ Q EA+ LF +M+ D +TL+ +++A ++E
Sbjct: 228 FEKMPE-RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMEL 286
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM--KVFEEIPQPDLVLWNTM 304
L+ G Q H+ I+ G + +G LI++YAKCS D C K+F++I ++ W M
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I+GY QK Y ++AL F+ + P+ +F + AC+NL+ +G+Q+ +K+
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S V N+L++MY++ G ++DAR+ FD + E N +S N++I YA++ EAL LF
Sbjct: 407 FSSVN-CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ + + + TF S+LS A G + +G++ + + G + + +I + R
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSR 524
Query: 484 AGKLTDAERLIEAM 497
G + A ++ E M
Sbjct: 525 CGNIESAFQVFEDM 538
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 200/390 (51%), Gaps = 27/390 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSL++ YS+ G ++A +F MG +D +SW++MV + + G AL F +M+
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH-IGSGLIDLYAKCSGDMRDC 286
+ Y A+ A ++ E + G +IK+G+ Q+ +G GLID++ K GD+
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
KVFE++P+ + V W MI+ Q Y+ +A+ F + GY PD + VISAC+N
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQF-GYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283
Query: 347 LS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC---GNLEDARRLFDRMPEHNTVS 402
+ LG+Q+H+ I+ + +R V L+ MY+KC G++ AR++FD++ +HN S
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDR-CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342
Query: 403 LNSMIAGYAQH-GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+MI GY Q G EAL LF M+ T++ P + TF S L ACA+ + G++ F+
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHA 402
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAV 521
+ GF + +I + R+G++ DA + + L N +
Sbjct: 403 VKL-GFSSVNCVANSLISMYARSGRIDDARKAFDI------------------LFEKNLI 443
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGV 551
Y + + YA + EE + + D+G+
Sbjct: 444 SYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 15/283 (5%)
Query: 36 LSNHFIL--LYSKCGCLSAAHHAFNQTQHANVFSF-------NVLLAAYARQLRIASARQ 86
+ NHF C L+A HA F N L++ YAR RI AR+
Sbjct: 373 IPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNN 144
FD + + +L+SYNT+I AYA ++E AL LF ++ ++ FT + L++ AS
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+ +Q+H I G SV N+L++ YSR G ++ A +VF +M E ++ +SW S++
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM-EDRNVISWTSIIT 551
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFH 263
+ +H +AL+LF +M+ + + T ++L+A + + + G + F + + G
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ ++D+ + SG + + ++ +P + D ++W T +
Sbjct: 612 PRMEHYACIVDILGR-SGSLSEAIQFINSMPYKADALVWRTFL 653
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 5/249 (2%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
+A+ + MV D+ T + L G H L +S +S + LI
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 274 DLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
LY+KC G +F + DL+ W+ M+S ++ +AL F + GY+P
Sbjct: 109 SLYSKC-GQWEKATSIFRLMGSSRDLISWSAMVSCFANN-NMGFRALLTFVDMIENGYYP 166
Query: 333 DDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC-GNLEDARR 390
++ F ACS S+G I IK + + V L+ M+ K G+L A +
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFK 226
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+F++MPE N V+ MI Q G EA+ LF M+ + P T V+SACA+
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMEL 286
Query: 451 VAEGQKYFS 459
+ GQ+ S
Sbjct: 287 LLLGQQLHS 295
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 36/213 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L + G+ +HA +K+ + + + N I +YS+CG + +A F
Sbjct: 479 TFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++ +A+ A +LF ++ + P+ V+Y ++SA + G
Sbjct: 539 EDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGW 598
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M +T G+I +HYA + + L R
Sbjct: 599 KHFKSM---------YTEHGVIPR-------------------MEHYACIVDIL----GR 626
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+G L EA + M D + W + + A H
Sbjct: 627 SGSLSEAIQFINSMPYKADALVWRTFLGACRVH 659
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/670 (35%), Positives = 373/670 (55%), Gaps = 45/670 (6%)
Query: 49 CLSAAHHAFNQTQHANVFS------FNV---LLAAYARQLRIASARQLFDQIPQPDLVSY 99
C S A + + HA V + F + L++ Y + + ARQ+FD + D+ ++
Sbjct: 168 CSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTF 227
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIY 157
N ++ YA GD E A LF M++ + + ++ + L K +H +
Sbjct: 228 NVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMN 287
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G V SL+ Y+ G ++ A+RVF M +++D VSW M+ Y ++ +A
Sbjct: 288 AGLVDDIRVATSLIRMYTTCGSIEGARRVFDNM-KVRDVVSWTVMIEGYAENGNIEDAFG 346
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF M + D T I+ A +L + H+ + +GF + + + L+ +YA
Sbjct: 347 LFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYA 406
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC G ++D +VF+ +P+ D+V W+ MI Y + Y +A F + R PD ++
Sbjct: 407 KC-GAIKDARQVFDAMPRRDVVSWSAMIGAYVENG-YGTEAFETFHLMKRSNIEPDGVTY 464
Query: 338 VCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ +++AC +L +G +I+ IK ++ S+ + + NAL+ M +K G++E AR +FD M
Sbjct: 465 INLLNACGHLGALDVGMEIYTQAIKADLVSH-VPLGNALIIMNAKHGSVERARYIFDTMV 523
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ ++ N+MI GY+ HG EAL LF+ ML+ P ++TFV VLSAC+ G V EG++
Sbjct: 524 RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRR 583
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
+F+ + + G P + Y CM+DLLGRAG+L +AE LI++MP P S
Sbjct: 584 FFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIH 643
Query: 504 ----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+A +AA L ++P + YV L+++YAA+G WE VA +R++M RG++K+ G +W
Sbjct: 644 GNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTW 703
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLV 607
IEV ++H FV ED SHP++ EI+ L + +K+ GY+P KE+ +
Sbjct: 704 IEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAIS 763
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
+HSEKLA+A+G+LS G PI + KNLR+C DCH+A KFIS + GREI RD RFH FK
Sbjct: 764 YHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFK 823
Query: 668 DGRCSCGDYW 677
DG CSCGDYW
Sbjct: 824 DGVCSCGDYW 833
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 241/474 (50%), Gaps = 21/474 (4%)
Query: 37 SNHFILLYSKCGCLSAA-------HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
S ++ L+ +C L A H + N++ N L+ Y+ + ARQ+FD
Sbjct: 57 SRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFD 116
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCL 147
+ +V++N LI+ YA G + A +LF+ M ++ + T ++ A S+ L
Sbjct: 117 SVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNW 176
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
K++H + GF + +L++ Y + G +D+A++VF + I+D ++N MV Y
Sbjct: 177 GKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL-HIRDVSTFNVMVGGYA 235
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ + +A +LF M + L + + SIL + E L G HA + +G +
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + LI +Y C G + +VF+ + D+V W MI GY++ D A G F +
Sbjct: 296 VATSLIRMYTTC-GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED-AFGLFATMQE 353
Query: 328 VGYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G PD +++ +++AC+ +S +L ++IH+ + I + V+ ALV MY+KCG +
Sbjct: 354 EGIQPDRITYMHIMNACA-ISANLNHAREIHS-QVDIAGFGTDLLVSTALVHMYAKCGAI 411
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+DAR++FD MP + VS ++MI Y ++G G EA F M +NI P +T++++L+AC
Sbjct: 412 KDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC 471
Query: 446 AHTGKVAEGQKYFS--MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
H G + G + ++ + D+ P G + +I + + G + A + + M
Sbjct: 472 GHLGALDVGMEIYTQAIKADLVSHVPLG---NALIIMNAKHGSVERARYIFDTM 522
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 185/332 (55%), Gaps = 6/332 (1%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+L+ YS G + EA+++F + E K V+WN+++ Y Q EA LF++MV L
Sbjct: 96 NTLIKLYSICGNVTEARQIFDSV-ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGL 154
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T S+L A +S L G + HA ++ +GF + IG+ L+ +Y K G M D
Sbjct: 155 EPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVK-GGSMDDAR 213
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SN 346
+VF+ + D+ +N M+ GY++ ++ ++A F ++ +VG P+ SF+ ++ C +
Sbjct: 214 QVFDGLHIRDVSTFNVMVGGYAKSGDW-EKAFELFYRMQQVGLKPNKISFLSILDGCWTP 272
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + GK +HA + + + I V +L+ MY+ CG++E ARR+FD M + VS M
Sbjct: 273 EALAWGKAVHAQCMNAGLVDD-IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVM 331
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I GYA++G +A LF M E I P IT++ +++ACA + + ++ S + D+ G
Sbjct: 332 IEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQV-DIAG 390
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
F + + ++ + + G + DA ++ +AMP
Sbjct: 391 FGTDLLVSTALVHMYAKCGAIKDARQVFDAMP 422
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 33/330 (10%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+D T + T L D G Q H+I+ G N + + LI LY+ C G++ + +
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSIC-GNVTEARQ 113
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F+ + +V WN +I+GY+Q + +A F+++ G P +F+ V+ ACS S
Sbjct: 114 IFDSVENKTVVTWNALIAGYAQVG-HVKEAFALFRQMVDEGLEPSIITFLSVLDACS--S 170
Query: 349 PS---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
P+ GK++HA + S+ + ALV+MY K G+++DAR++FD + + + N
Sbjct: 171 PAGLNWGKEVHAQVVTAGFVSD-FRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNV 229
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
M+ GYA+ G +A LF M + + P I+F+S+L C +A G+
Sbjct: 230 MVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV-------- 281
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTD---AERLIEAMPFNPGSIALKAANHFLQLEPSNAVP 522
H CM AG + D A LI M GSI A F ++ + V
Sbjct: 282 -------HAQCM-----NAGLVDDIRVATSLIR-MYTTCGSIE-GARRVFDNMKVRDVVS 327
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ ++ YA +G E+ + M++ G+Q
Sbjct: 328 WTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
++L G H D ++V + C+ L +LGKQ+ I+ R I N L+ +YS
Sbjct: 45 LQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGG-RQLNIYELNTLIKLYS 103
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
CGN+ +AR++FD + V+ N++IAGYAQ G EA LF M++ + P+ ITF+S
Sbjct: 104 ICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLS 163
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
VL AC+ + G++ + + GF + + ++ + + G + DA ++ + +
Sbjct: 164 VLDACSSPAGLNWGKEVHAQVVTA-GFVSDFRIGTALVSMYVKGGSMDDARQVFDGL--- 219
Query: 501 PGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
H + N VM+ YA SG WE+ + M+ G++
Sbjct: 220 ----------HIRDVSTFN----VMVGG-YAKSGDWEKAFELFYRMQQVGLK 256
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 3 RQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNH-------------FILLYSKCGC 49
RQV + RRD+V+ ++ Y++N A+ + H +I L + CG
Sbjct: 415 RQVFDA-MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGH 473
Query: 50 LSA---AHHAFNQTQHANVFSF----NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
L A + Q A++ S N L+ A+ + AR +FD + + D++++N +
Sbjct: 474 LGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAM 533
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC---- 158
I Y+ G+ AL LF M ++RF + T G+++A S + + Y
Sbjct: 534 IGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACS-RAGFVDEGRRFFTYLLEGR 592
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G + ++ R G LDEA+ + M W+S++VA
Sbjct: 593 GIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 380/669 (56%), Gaps = 49/669 (7%)
Query: 55 HAFN-QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
HA+ + N F N L+A Y + ++AS++ L DLV++NT++S+
Sbjct: 138 HAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 197
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSL 170
AL ++M + + D FT+S ++ A S+ L K+LH A+ G D + V ++L
Sbjct: 198 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 257
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGL 229
+ Y + +RVF M + K + WN+M+ Y Q+ EAL LF M S L
Sbjct: 258 VDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 316
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ T+A ++ A H ++K G ++ + + L+D+Y++ G + M++
Sbjct: 317 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL-GKIDIAMRI 375
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN----------RVGYHPDDCSFVC 339
F ++ DLV WNTMI+GY E + D L K N RV P+ + +
Sbjct: 376 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 435
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
++ +C+ LS + GK+IHA IK + ++ ++V +ALV MY+KCG L+ +R++FD++P+
Sbjct: 436 ILPSCAALSALAKGKEIHAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
N ++ N +I Y HG G EA+ L M+ + P +TF+SV +AC+H+G V EG + F
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 554
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP--FNPGS------------- 503
+MK +G EP +HY+C++DLLGRAG++ +A +L+ MP FN
Sbjct: 555 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 614
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
I AA + +QLEP+ A YV+LANIY+++G W++ +RR M+++GV+K+PG SWI
Sbjct: 615 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 674
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVH 608
E ++H FVA D SHP +++ YLE + +M++ GYVPD KE L
Sbjct: 675 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 734
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLA+AFG+L+TS G I V KNLR+C DCH A KFIS I REI +RD RFH FK+
Sbjct: 735 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 794
Query: 669 GRCSCGDYW 677
G CSCGDYW
Sbjct: 795 GTCSCGDYW 803
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 267/573 (46%), Gaps = 77/573 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
F +LK +D+ GK +HA +Y S ++N + LY KCG A +
Sbjct: 12 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY----- 66
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
++FD+I + + VS+N+LIS+ E AL F
Sbjct: 67 --------------------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 100
Query: 120 KDMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ M ++ + FTL ++TA SN L + KQ+H + G + + + N+L+ Y
Sbjct: 101 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 159
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G L +K + G +D V+WN+++ + Q+ + LEAL+ +EMV + D +T+
Sbjct: 160 GKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 218
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+S+L A + LE L G + HA+ +K+G +NS +GS L+D+Y C + +VF+ +
Sbjct: 219 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK-QVLSGRRVFDGM 277
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ LWN MI+GYSQ E + L G + + V+ AC S
Sbjct: 278 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 337
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH +K + +R V N L+ MYS+ G ++ A R+F +M + + V+ N+MI GY
Sbjct: 338 EAIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 396
Query: 413 HGIGMEALRLFEWM--LE---------TNIPPTNITFVSVLSACAHTGKVAEGQKY--FS 459
+AL L M LE ++ P +IT +++L +CA +A+G++ ++
Sbjct: 397 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 456
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSN 519
+ ++ G S ++D+ + G L + ++ + +P N
Sbjct: 457 IKNNLATDVAVG---SALVDMYAKCGCLQMSRKVFDQIP------------------QKN 495
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + ++ Y G +E + R+M +GV+
Sbjct: 496 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 528
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 193/417 (46%), Gaps = 60/417 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK LHA LKN G L
Sbjct: 217 TISSVLPACSHLEMLRTGKELHAYALKN-------------------GSLD--------- 248
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + L+ Y ++ S R++FD + + +N +I+ Y+ + AL LF
Sbjct: 249 --ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 306
Query: 121 DMREKR-FDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E + T++G++ A S + +H + G D V N+L+ YSR
Sbjct: 307 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 366
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAY--GQHREGLEALQLFQEMVSLQ--------- 226
G +D A R+F +M E +D V+WN+M+ Y +H E +AL L +M +L+
Sbjct: 367 GKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHE--DALLLLHKMQNLERKVSKGASR 423
Query: 227 --LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L + TL +IL + +L L G + HA+ IK+ + +GS L+D+YAKC G ++
Sbjct: 424 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-GCLQ 482
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF++IPQ +++ WN +I Y +A+ + + G P++ +F+ V +AC
Sbjct: 483 MSRKVFDQIPQKNVITWNVIIMAYGMHGN-GQEAIDLLRMMMVQGVKPNEVTFISVFAAC 541
Query: 345 SNLSPSLGKQIHALTI-----KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
S+ S + + + + +E S+ + +V + + G +++A +L + MP
Sbjct: 542 SH-SGMVDEGLRIFYVMKPDYGVEPSSDHYA---CVVDLLGRAGRIKEAYQLMNMMP 594
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 139/282 (49%), Gaps = 11/282 (3%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCS 280
M+ L + D Y ++L A L+D+ G Q HAH+ K G+ +S + + L++LY KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC- 59
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
GD KVF+ I + + V WN++IS E++ + AL F+ + P + V V
Sbjct: 60 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENVEPSSFTLVSV 118
Query: 341 ISACSNLS-PS---LGKQIHALTI-KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
++ACSNL P +GKQ+HA + K E+ S I N LVAMY K G L ++ L
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII---NTLVAMYGKLGKLASSKVLLGSF 175
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ V+ N++++ Q+ +EAL M+ + P T SVL AC+H + G+
Sbjct: 176 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 235
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + S ++D+ ++ R+ + M
Sbjct: 236 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 277
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ CV +++H +K + ++ N + +YS+ G + A F +
Sbjct: 320 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 379
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ DLV++NT+I+ Y E AL L
Sbjct: 380 E-------------------------------DRDLVTWNTMITGYVFSEHHEDALLLLH 408
Query: 121 DMR--EKR---------FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVN 167
M+ E++ + TL ++ A+ + L K++H AI +V
Sbjct: 409 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 468
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ Y++ G L +++VF ++ + K+ ++WN +++AYG H G EA+ L + M+ +
Sbjct: 469 SALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 527
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T S+ A + + GL+ F+ G +S + ++DL + +G +++
Sbjct: 528 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR-AGRIKEA 586
Query: 287 MKVFEEIPQ 295
++ +P+
Sbjct: 587 YQLMNMMPR 595
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/647 (38%), Positives = 369/647 (57%), Gaps = 41/647 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N N L+AAY + + SA LFD++ +PD+VS+N++I+ G + + L +F M
Sbjct: 228 SNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 287
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ D TL ++ A +N NL L + LH + F +N+LL YS+ G L
Sbjct: 288 LILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 347
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASIL 238
+ A VF +MG+ VSW S++ AY REGL +A+ LF EM S + D+YT+ SI+
Sbjct: 348 NGATEVFVKMGDTTI-VSWTSIIAAY--VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 404
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L G H+++IK+G N + + LI++YAKC G + + VF +IP D+
Sbjct: 405 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKC-GSVEEARLVFSKIPVKDI 463
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WNTMI GYSQ ++AL F + + + PDD + CV+ AC+ L+ G++IH
Sbjct: 464 VSWNTMIGGYSQ-NLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHG 521
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ S+ + V ALV MY+KCG L A+ LFD +P+ + +S MIAGY HG G
Sbjct: 522 HILRRGYFSD-LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGN 580
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EA+ F M I P +F ++L+AC+H+G + EG K+F+ M++ G EP+ EHY+C+
Sbjct: 581 EAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACV 640
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLL R G L+ A + IE+MP P + +A K A H +LEP N
Sbjct: 641 VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNT 700
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+LAN+YA + KWEEV +R+ M+ RG ++ PG SWIEV + ++FVA + HP K
Sbjct: 701 RYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAK 760
Query: 581 EIHNYLEEMSRKMKQAGYVP----------DKEKRLVH--HSEKLAVAFGLLSTSYGEPI 628
+I L +++ +M+ Y D EK ++ HSEK A+AFG+L+ G +
Sbjct: 761 KIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTV 820
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KN R+CGDCH KF+S EI +RD+ RFH FKDG CSC D
Sbjct: 821 RVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 352 GKQIHALTIKIEIRSNRISVNNAL----VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
GK++H++ I SN ISV+ AL V MY CG+L R++FD++ N ++
Sbjct: 113 GKRVHSVII-----SNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLM 167
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ YA+ G E++ LF+ M + + TF VL A GKV E ++
Sbjct: 168 SEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 216
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G L G+ +H L+ +++ + +Y+KCG L A F+
Sbjct: 499 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 558
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
++ S+ V++A Y A F+++ +PD S++ +++A + G
Sbjct: 559 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGW 618
Query: 117 SLFKDMREK 125
F MR +
Sbjct: 619 KFFNSMRNE 627
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/647 (38%), Positives = 363/647 (56%), Gaps = 49/647 (7%)
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
F+ + +Q R+ A Q+ QI +P Y+TLI + + + + ++ F
Sbjct: 42 FDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGF 101
Query: 128 DTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGFLD 181
F L+ L+ A ++L ++L FD + N L++ Y++ G L
Sbjct: 102 VPGLFILNRLLEMYAKCDSLMDSQKL--------FDEMPERDLCSWNILISGYAKMGLLQ 153
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTA 240
EAK +F +M E +D SW +M+ Y +H EAL+LF+ M S + +T++S L A
Sbjct: 154 EAKSLFDKMPE-RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAA 212
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
++ L G + H +++++G + + S L D+Y KC G + + +F+++ D+V
Sbjct: 213 AAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKC-GSIEEARHIFDKMVDRDIVT 271
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALT 359
W MI Y Q + + F L R G P++ +F V++AC+N S LGK++H
Sbjct: 272 WTAMIDRYFQ-DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYM 330
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
++ + + ALV MYSKCGN+ A R+F P+ + S S+IAGYAQ+G EA
Sbjct: 331 TRVGFDPFSFAAS-ALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEA 389
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+R FE ++++ P +ITFV VLSACAH G V +G YF +K+ +G +HY+C+ID
Sbjct: 390 IRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIID 449
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LL R+G+ +AE +I M P +A +AA ++EP N
Sbjct: 450 LLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPAT 509
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV LANIYA +G W EVA IR+ M DRGV KKPG SWI +K+ +HVF+ D SHP KEI
Sbjct: 510 YVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEI 569
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ +L ++S++MK+ G+VPD KE+ L +HSEKLAVAFG++ST G PI V
Sbjct: 570 NEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKV 629
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR C DCH AIKFIS I R+I VRD+ RFH F+DG CSC DYW
Sbjct: 630 FKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 236/469 (50%), Gaps = 11/469 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ ++++C+ R L GK +H + L VP ++ N + +Y+KC L + F++
Sbjct: 72 VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVP-GLFILNRLLEMYAKCDSLMDSQKLFDE 130
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
++ S+N+L++ YA+ + A+ LFD++P+ D S+ +IS Y AL LF
Sbjct: 131 MPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF 190
Query: 120 KDM-REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ M R ++ FT+S + A++ CL K++H + G D V ++L Y +
Sbjct: 191 RMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGK 250
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++EA+ +F +M + +D V+W +M+ Y Q E LF +++ + + +T +
Sbjct: 251 CGSIEEARHIFDKMVD-RDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSG 309
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A + G + H ++ + GF S S L+ +Y+KC G+M +VF+E PQP
Sbjct: 310 VLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKC-GNMVSAERVFKETPQP 368
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
DL W ++I+GY+Q + D+A+ F+ L + G PD +FV V+SAC++ +
Sbjct: 369 DLFSWTSLIAGYAQNGQ-PDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDY 427
Query: 357 ALTIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG 414
+IK + + + A ++ + ++ G ++A + +M + + S++ G HG
Sbjct: 428 FHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
A R E + E P T+V++ + A G +E K M D
Sbjct: 488 NLKLAQRAAEALFEIE-PENPATYVTLANIYATAGMWSEVAKIRKTMDD 535
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/659 (37%), Positives = 376/659 (57%), Gaps = 48/659 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+A Y + ++AS++ L DLV++NT++S+ AL ++M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNGFL 180
+ + D FT+S ++ A S+ L K+LH A+ G D + V ++L+ Y +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILT 239
+RVF M + K + WN+M+ Y Q+ EAL LF M S L + T+A ++
Sbjct: 355 LSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A H ++K G ++ + + L+D+Y++ G + M++F ++ DLV
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL-GKIDIAMRIFGKMEDRDLV 472
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLN----------RVGYHPDDCSFVCVISACSNLSP 349
WNTMI+GY E + D L K N RV P+ + + ++ +C+ LS
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+ GK+IHA IK + ++ ++V +ALV MY+KCG L+ +R++FD++P+ N ++ N +I
Sbjct: 533 LAKGKEIHAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Y HG G EA+ L M+ + P +TF+SV +AC+H+G V EG + F +MK +G E
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP--FNPG----------------SIALKAAN 510
P +HY+C++DLLGRAG++ +A +L+ MP FN I AA
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ +QLEP+ A YV+LANIY+++G W++ +RR M+++GV+K+PG SWIE ++H FV
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
A D SHP +++ YLE + +M++ GYVPD KE L HSEKLA+AFG
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+L+TS G I V KNLR+C DCH A KFIS I REI +RD RFH FK+G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 267/572 (46%), Gaps = 77/572 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +LK +D+ GK +HA +Y S ++N + LY KCG A +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY------ 153
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++FD+I + + VS+N+LIS+ E AL F+
Sbjct: 154 -------------------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 121 DMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
M ++ + FTL ++TA SN L + KQ+H + G + + + N+L+ Y
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYG 247
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L +K + G +D V+WN+++ + Q+ + LEAL+ +EMV + D +T++
Sbjct: 248 KLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A + LE L G + HA+ +K+G +NS +GS L+D+Y C + +VF+ +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK-QVLSGRRVFDGMF 365
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ LWN MI+GYSQ E + L G + + V+ AC S +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
IH +K + +R V N L+ MYS+ G ++ A R+F +M + + V+ N+MI GY
Sbjct: 426 AIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 414 GIGMEALRLFEWM--LE---------TNIPPTNITFVSVLSACAHTGKVAEGQKY--FSM 460
+AL L M LE ++ P +IT +++L +CA +A+G++ +++
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
++ G S ++D+ + G L + ++ + +P N
Sbjct: 545 KNNLATDVAVG---SALVDMYAKCGCLQMSRKVFDQIP------------------QKNV 583
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + ++ Y G +E + R+M +GV+
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 193/417 (46%), Gaps = 60/417 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK LHA LKN G L
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKN-------------------GSLD--------- 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + L+ Y ++ S R++FD + + +N +I+ Y+ + AL LF
Sbjct: 336 --ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 121 DMREKR-FDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E + T++G++ A S + +H + G D V N+L+ YSR
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAY--GQHREGLEALQLFQEMVSLQ--------- 226
G +D A R+F +M E +D V+WN+M+ Y +H E +AL L +M +L+
Sbjct: 454 GKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHE--DALLLLHKMQNLERKVSKGASR 510
Query: 227 --LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L + TL +IL + +L L G + HA+ IK+ + +GS L+D+YAKC G ++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-GCLQ 569
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF++IPQ +++ WN +I Y +A+ + + G P++ +F+ V +AC
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGN-GQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 345 SNLSPSLGKQIHALTI-----KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
S+ S + + + + +E S+ + +V + + G +++A +L + MP
Sbjct: 629 SH-SGMVDEGLRIFYVMKPDYGVEPSSDHYA---CVVDLLGRAGRIKEAYQLMNMMP 681
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 11/290 (3%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGL 272
EA+ + +M+ L + D Y ++L A L+D+ G Q HAH+ K G+ +S + + L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
++LY KC GD KVF+ I + + V WN++IS E++ + AL F+ + P
Sbjct: 140 VNLYRKC-GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENVEP 197
Query: 333 DDCSFVCVISACSNLS-PS---LGKQIHALTI-KIEIRSNRISVNNALVAMYSKCGNLED 387
+ V V++ACSNL P +GKQ+HA + K E+ S I N LVAMY K G L
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII---NTLVAMYGKLGKLAS 254
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
++ L + V+ N++++ Q+ +EAL M+ + P T SVL AC+H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G++ + + S ++D+ ++ R+ + M
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ CV +++H +K + ++ N + +YS+ G + A F +
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ DLV++NT+I+ Y E AL L
Sbjct: 467 E-------------------------------DRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 121 DMR--EKR---------FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVN 167
M+ E++ + TL ++ A+ + L K++H AI +V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ Y++ G L +++VF ++ + K+ ++WN +++AYG H G EA+ L + M+ +
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T S+ A + + GL+ F+ G +S + ++DL + +G +++
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR-AGRIKEA 673
Query: 287 MKVFEEIPQ 295
++ +P+
Sbjct: 674 YQLMNMMPR 682
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/653 (36%), Positives = 367/653 (56%), Gaps = 52/653 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F N L+ Y + + A +FD + D V++N +I YA G +F MR
Sbjct: 239 TTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR 298
Query: 124 EKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
G LS + ++ LC KQLHC + G++ + +L+ YS+
Sbjct: 299 -----LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+DEA ++F + V+W +M+ + Q+ +A+ LF +M + + +T ++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L S L+ Q HA +IK+ + + + + L+D Y K +G++ + +VF IP
Sbjct: 414 VLAGKPS--SLLS--QLHAQIIKAYYEKVPSVATALLDAYVK-TGNVVESARVFYSIPAK 468
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQ 354
D+V W+ M++G +Q + S++A+ F +L + G P++ +F VI+ACS+ + ++ GKQ
Sbjct: 469 DIVAWSAMLTGLAQTRD-SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQ 527
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHA +K +SN + V++AL+ MYSK GN+E A ++F R E + VS NSMI GY QHG
Sbjct: 528 IHATAVK-SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+AL +F+ M +P ++TF+ VL+AC H G V EG+KYF++M + + + EHY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY 646
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS------------------IALKAANHFLQLE 516
SCM+DL RAG A +I MPF P S + AA + L+
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPF-PASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQ 705
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P++AV YV+L+NI+A +G WEE A +R+LM +R V+K+ G SWIE+K ++ F+A D SH
Sbjct: 706 PNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSH 765
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P ++ LEE+S K+K GY PD KE L HSE+LA+A+GL++
Sbjct: 766 PFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPP 825
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI + KNLRICGDCHN I+ IS I R + VRD+ RFH FK G CSCG YW
Sbjct: 826 GAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 214/457 (46%), Gaps = 17/457 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L ++ H H + F ++ L + R A QLFD+ P D+ YN L+ ++
Sbjct: 21 GRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFS 80
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS 165
AL LFKD+ DG TLS + + + +Q+HC ++ GF S
Sbjct: 81 RNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVS 140
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V SL+ Y + ++ + +F EMG IK+ VSW S++ Y ++ E + L +M
Sbjct: 141 VGTSLVDMYMKTEDFEDGRGIFDEMG-IKNVVSWTSLLSGYARNGLNDEVIHLINQMQME 199
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +T A++L A + GG+Q HA ++K+GF + + + LI +Y K S + D
Sbjct: 200 GVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLK-SEMVGD 258
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF+ + D V WN MI GY+ Y + F ++ G F + CS
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYL-EGFQMFHRMRLAGVKLSRTVFCTALKLCS 317
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSL 403
+ KQ+H +K + + AL+ YSKC ++++A +LF HN V+
Sbjct: 318 QQRELNFTKQLHCGVVKNGYEFAQ-DIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE--GQKYFSMM 461
+MI G+ Q+ +A+ LF M + P + T+ +VL+ GK + Q + ++
Sbjct: 377 TAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA-----GKPSSLLSQLHAQII 431
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
K + P + ++D + G + ++ R+ ++P
Sbjct: 432 KAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIP 466
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/736 (34%), Positives = 387/736 (52%), Gaps = 101/736 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL G DL SL + +K + + + Y++ G L A H F
Sbjct: 364 FVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP 423
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N +S+ ++AA+A+ R+ A QL++++P+ + + +++AYA G + A +F +
Sbjct: 424 ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDE 483
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ L+ + A N+++ Y++NG L
Sbjct: 484 I-----------LNPNVVAW--------------------------NAIIAGYTQNGMLK 506
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EAK +F +M +K+ SW +M+ + Q+ E EAL+L E+ + S L+A
Sbjct: 507 EAKDLFQKM-PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSAC 565
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
++ D+ G H+ IK+G NS++ +GLI +YAKC G++ D VF I D V W
Sbjct: 566 ANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKC-GNVEDGSHVFRTIRVKDTVSW 624
Query: 302 NTMISGYSQKEEYSDQ------------------------------ALGCFKKLNRVGYH 331
N++ISG S+ D AL F + G
Sbjct: 625 NSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIK 684
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
P+ + ++SAC NL LG+Q HAL K+ + + V N+L+ MY KCG ED
Sbjct: 685 PNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDT-FLFVGNSLITMYFKCG-YEDGFC 742
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+F+ MPEH+ ++ N+++ G AQ+G+G EA+++FE M I P ++F+ VL AC+H G
Sbjct: 743 VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGL 802
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-- 508
V EG +F+ M +G P HY+CM+DLLGRAG L++AE LIE MP P S+ +A
Sbjct: 803 VDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862
Query: 509 ---------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A Q+ + YV+L+N++A+ G W++VA IR+LM+D+G+ K
Sbjct: 863 GACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTK 922
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
+PG SWI+VK ++H FV D +H I+EI++ L+E + GY+PD
Sbjct: 923 EPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQ 982
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
K+ L++HSEKLAV FG+LST G PI ++KNLRICGDCH +KF+S + R+I +RD
Sbjct: 983 KQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGN 1042
Query: 662 RFHCFKDGRCSCGDYW 677
RFH F+DG CSCGDYW
Sbjct: 1043 RFHHFRDGSCSCGDYW 1058
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 52/425 (12%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV 97
N I YS+ G + A F+ N+ ++ +LL YA++ RI AR++F+ + + ++V
Sbjct: 206 NSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVV 265
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY 157
S+N +IS Y GD ++A LF +M EK AS N ++
Sbjct: 266 SWNAMISGYVQNGDLKNARKLFDEMPEKN------------VASWN-----------SVV 302
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G+ H CY + EA+ +F +M E ++ VSW M+ Y + EA
Sbjct: 303 TGYCH----------CYR----MSEARELFDQMPE-RNSVSWMVMISGYVHISDYWEAWD 347
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLED--LVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+F +M D +L+A T L+D L+G L+ A IK+G+ + +GS +++
Sbjct: 348 VFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIA--IKTGYEGDVVVGSAILNA 405
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y + +G + M FE +P+ + W TMI+ ++Q D A+ ++++ P+
Sbjct: 406 YTR-NGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDD-AIQLYERV------PEQT 457
Query: 336 SFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V +A +G+ A I EI + + NA++A Y++ G L++A+ LF +M
Sbjct: 458 --VATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
P N+ S +MIAG+ Q+ EAL L + + P++ +F S LSACA+ G V G+
Sbjct: 516 PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGR 575
Query: 456 KYFSM 460
S+
Sbjct: 576 VIHSL 580
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 162/310 (52%), Gaps = 9/310 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C D+ G+ +H+L +K F++Y+ N I +Y+KCG + H F
Sbjct: 557 SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI 616
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S+N L++ + + AR +F+++P+ D+VS+ +ISAY G E AL LF
Sbjct: 617 RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFL 676
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DM + + T++ L++A N + L +Q H L GFD + V NSL+T Y + G
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG 736
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ D VF EM E D ++WN+++V Q+ G EA+++F++M + D + +L
Sbjct: 737 YED-GFCVFEEMPE-HDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVL 794
Query: 239 TAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A S LV G F++ K G + + ++DL + +G + + + E +P +
Sbjct: 795 CA-CSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGR-AGYLSEAEALIENMPVK 852
Query: 296 PDLVLWNTMI 305
PD V+W ++
Sbjct: 853 PDSVIWEALL 862
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 142/372 (38%), Gaps = 113/372 (30%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+ + R G ++EA+RVF EM + +D VSWNSM+ Y Q+ + EA LF V
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQ-RDVVSWNSMINGYSQNGKVDEARLLFDAFV---- 229
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
G ++ T +LT YAK G + +
Sbjct: 230 GKNIRTWTILLTG-----------------------------------YAK-EGRIEEAR 253
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VFE + + ++V WN MISGY Q
Sbjct: 254 EVFESMTERNVVSWNAMISGYVQN------------------------------------ 277
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
G +A + E+ ++ N++V Y C + +AR LFD+MPE N+VS MI
Sbjct: 278 ----GDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMI 333
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA-------------------CAHT 448
+GY EA +F M T P FV VLSA +
Sbjct: 334 SGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYE 393
Query: 449 GKVAEGQKYF-------SMMKDMFGFE--PEGEHYS--CMIDLLGRAGKLTDAERLIEAM 497
G V G S+ M FE PE YS MI + G+L DA +L E +
Sbjct: 394 GDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV 453
Query: 498 PFNPGSIALKAA 509
P ++A K A
Sbjct: 454 P--EQTVATKTA 463
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/708 (36%), Positives = 385/708 (54%), Gaps = 68/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +LK C +L GK +H L +K+ FS
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKS--GFSL--------------------------- 168
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++F+ L YA+ ++ AR++FD++P+ DLVS+NT+++ Y+ G AL +
Sbjct: 169 --DLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNL 226
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E+ T+ ++ A S L LI K++H A+ GFD ++ +L+ Y++ G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSA-LRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCG 285
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+ +F M E ++ VSWNSM+ AY Q+ EA+ +FQ+M+ + ++ L
Sbjct: 286 SLKTARLLFDGMLE-RNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL G H ++ +N + + LI +Y KC ++ +F ++ +
Sbjct: 345 HACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCK-EVDTAASMFGKLQSRTI 403
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
V WN MI G++Q +AL F ++ PD ++V VI+A + LS + K IH
Sbjct: 404 VSWNAMILGFAQNGR-PIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ ++ + N + V ALV MY+KCG + AR +FD M E + + N+MI GY HGIG
Sbjct: 463 VVMRNCLDKN-VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
AL LFE M + I P +TF+SV+SAC+H+G V G K F MMK+ + EP +HY M
Sbjct: 522 AALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGRAG+L +A I MP P + A K A +L P +
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDG 641
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+LANIY A+ WE+V +R M +G++K PG S +E+K ++H F + +HP K
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSK 701
Query: 581 EIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
+I+ +LE++ ++K+AGYVPD KE+ L HSEKLA++FGLL+T+ G I
Sbjct: 702 KIYAFLEKLICQIKEAGYVPDTNLILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIH 761
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLR+C DCHNA K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 156/287 (54%), Gaps = 5/287 (1%)
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L++ + R G +DEA RVF + + K V + +M+ + + + +AL+ F M ++
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDK-KLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEP 133
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+Y +L +L G + H L+KSGF + +GL ++YAKC + + KV
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR-QVHEARKV 192
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS- 348
F+ +P+ DLV WNT+++GYSQ + AL + P + V V+ A S L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQN-GMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRL 251
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+GK+IH ++ S +++ ALV MY+KCG+L+ AR LFD M E N VS NSMI
Sbjct: 252 IRIGKEIHGYAMRAGFDS-LVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMID 310
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
Y Q+ EA+ +F+ ML+ + PT+++ + L ACA G + G+
Sbjct: 311 AYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 182/418 (43%), Gaps = 43/418 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL R + GK +H ++ ++ + +Y+KCG L A F+
Sbjct: 238 TIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 61 QHANVFSFNVLLAAYARQLRIASA----RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
NV S+N ++ AY + A +++ D+ +P VS + A AD GD E
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERG- 356
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
RF +H L++ D SV NSL++ Y +
Sbjct: 357 ---------RF-----------------------IHKLSVELELDRNVSVVNSLISMYCK 384
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+D A +F ++ + + VSWN+M++ + Q+ +EAL F +M + + D +T S
Sbjct: 385 CKEVDTAASMFGKL-QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVS 443
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++TA L H ++++ +N + + L+D+YAKC G + +F+ + +
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKC-GAIMIARLIFDMMSER 502
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQ 354
+ WN MI GY AL F+++ + P+ +F+ VISACS+ L + K
Sbjct: 503 HVTTWNAMIDGYGT-HGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
H + I + + A+V + + G L +A +MP V++ + G Q
Sbjct: 562 FHMMKENYSIEPS-MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV+++ + G++++A R+F+ + + V +M+ G+A+ +AL+ F M + + P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
F +L C ++ G++ ++ GF + + + ++ + ++ +A ++
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVHEARKVF 193
Query: 495 EAMP 498
+ MP
Sbjct: 194 DRMP 197
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/674 (37%), Positives = 370/674 (54%), Gaps = 43/674 (6%)
Query: 43 LYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
L S C + A H HA A++ LL Y++ + +A + F +
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETEN 427
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHC 153
+V +N ++ AY + + +F+ M+ + + FT ++ S L L +Q+H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHT 487
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
I GF V + L+ Y++ G L A R+ + E D VSW +M+ Y QH
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE-DDVVSWTAMIAGYVQHDMFS 546
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EALQLF+EM + D AS ++A + L G Q HA +GF + I + LI
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
LYA+C G +++ FE+I + + WN+++SG +Q Y ++AL F ++ R +
Sbjct: 607 SLYARC-GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSG-YFEEALQVFVRMLRTEAEVN 664
Query: 334 DCSF-VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
++ + +A S + G+QIH++ +K S R V+N+L+++Y+K G++ DA R F
Sbjct: 665 MFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER-EVSNSLISLYAKSGSISDAWREF 723
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+ M E N +S N+MI GY+QHG GMEALRLFE M I P ++TFV VLSAC+H G V
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------- 503
EG YF M + P+ EHY C++DLLGRAG+L A I+ MP +
Sbjct: 784 EGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843
Query: 504 --------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
I +AA+H L+LEP ++ YV+++NIYA S +W R+LM+DRGV+K+P
Sbjct: 844 CVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEP 903
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-----------KEK 604
G SWIEVK +H F A D HP+ +I+ Y+ ++R+ + GYV D ++
Sbjct: 904 GRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKD 963
Query: 605 RLVH-HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
+ H HSEKLA+AFGLLS PI VMKNLR+C DCHN IK++S I+ R I VRD +RF
Sbjct: 964 PITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRF 1023
Query: 664 HCFKDGRCSCGDYW 677
H F G CSC D+W
Sbjct: 1024 HHFDGGVCSCKDFW 1037
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 178/606 (29%), Positives = 297/606 (49%), Gaps = 51/606 (8%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ Y++ I SA+++F+ I D+V++ +IS + G E A+ LF DM
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 129 TDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS +++AS+ L +QLHCL I GF V N L+ YSR+ L A+R+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M +D VS+NS++ Q AL+LF +M L D T+AS+L+A S+
Sbjct: 319 FSTMNS-RDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA 377
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G+Q H+H IK+G + + L+DLY+KC+ D+ K F ++VLWN M+
Sbjct: 378 LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA-DVETAHKFFLTTETENIVLWNVMLV 436
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q + SD + F+++ G P+ ++ ++ C++L LG+QIH IK +
Sbjct: 437 AYGQLDNLSD-SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQ 495
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + V + L+ MY+K G L A R+ R+PE + VS +MIAGY QH + EAL+LFE
Sbjct: 496 LN-VYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEE 554
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M I NI F S +SACA + +GQ+ + GF + + +I L R G
Sbjct: 555 MEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAA-GFGADLSINNALISLYARCG 613
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI-RR 544
++ +A E ++ N + + L + A SG +EE + R
Sbjct: 614 RIQEAYLAFE------------------KIGDKNNISWNSLVSGLAQSGYFEEALQVFVR 655
Query: 545 LMRDRGVQKKPGFSW------------IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
++R + F++ I+ +Q+H V + G + +E+ N L + K
Sbjct: 656 MLRTEA--EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTG-YDSEREVSNSLISLYAK 712
Query: 593 MKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNAIKF 646
+G + D + SE+ +++ + T Y E + + + +++CG N + F
Sbjct: 713 ---SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTF 769
Query: 647 ISAIAG 652
+ ++
Sbjct: 770 VGVLSA 775
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 245/439 (55%), Gaps = 8/439 (1%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H+ + N L+A Y+R ++ SA ++F + D VSYN+LIS G ++ AL LF
Sbjct: 293 HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK 352
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D T++ L++A ++ L K QLH AI G + SLL YS+
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A + F+ E ++ V WN M+VAYGQ ++ ++F++M + + +T SIL
Sbjct: 413 VETAHK-FFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
TSL L G Q H H+IK+GF N ++ S LID+YAK G + +++ +P+ D+V
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAK-YGQLALALRILRRLPEDDVV 530
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W MI+GY Q + +S +AL F+++ G D+ F ISAC+ + G+QIHA
Sbjct: 531 SWTAMIAGYVQHDMFS-EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ ++ +S+NNAL+++Y++CG +++A F+++ + N +S NS+++G AQ G E
Sbjct: 590 SYAAGFGAD-LSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL++F ML T T+ S +SA A + +GQ+ SM+ G++ E E + +I
Sbjct: 649 ALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT-GYDSEREVSNSLI 707
Query: 479 DLLGRAGKLTDAERLIEAM 497
L ++G ++DA R M
Sbjct: 708 SLYAKSGSISDAWREFNDM 726
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 9/432 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y R A ++FD+ + S+N +I + LF+ M + +
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158
Query: 131 GFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
G+T +G++ A +KQ+H Y GFD V N L+ YS+NG+++ AK+VF
Sbjct: 159 GYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF 218
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ +KD V+W +M+ Q+ EA+ LF +M + ++ Y L+S+L+A T ++
Sbjct: 219 NCIC-MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q H +IK GFH +++ +GL+ LY++ S + ++F + D V +N++ISG
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSR-SRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS 366
Q + +SD+AL F K+ R PD + ++SAC+++ G Q+H+ IK + +
Sbjct: 337 LVQ-QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ I + +L+ +YSKC ++E A + F N V N M+ Y Q ++ +F M
Sbjct: 396 D-IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P T+ S+L C G + G++ + + GF+ S +ID+ + G+
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQ 513
Query: 487 LTDAERLIEAMP 498
L A R++ +P
Sbjct: 514 LALALRILRRLP 525
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 159/336 (47%), Gaps = 20/336 (5%)
Query: 132 FTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+ L G +T+ S L +LHC GFD + +SL+ Y R+G A +VF E
Sbjct: 63 WLLEGCLTSGS--LFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG- 250
+ SWN M+ + + + LF+ M++ + + YT A +L A VGG
Sbjct: 121 N-RSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA------CVGGD 173
Query: 251 ------LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
Q H+ GF + + + LIDLY+K +G + KVF I D+V W M
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK-NGYIESAKKVFNCICMKDIVTWVAM 232
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISG SQ ++A+ F ++ P V+SA + + LG+Q+H L IK
Sbjct: 233 ISGLSQNG-LEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S V N LVA+YS+ L A R+F M + VS NS+I+G Q G AL LF
Sbjct: 292 FHS-ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
M + P IT S+LSACA G + +G + S
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
++ G+ +H++ LK +SN I LY+K G +S A FN NV S+N ++
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739
Query: 74 AYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
Y++ A +LF+++ P+ V++ ++SA + G + L F+ M
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM------- 792
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
F + L+ S + +C++ L R G LD A E
Sbjct: 793 --FKIHDLVPKSEHYVCVVDLL-----------------------GRAGQLDRAMEYIKE 827
Query: 190 MGEIKDEVSWNSMVVAYGQHR 210
M D + W +++ A H+
Sbjct: 828 MPIPADAMIWRTLLSACVIHK 848
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/710 (36%), Positives = 383/710 (53%), Gaps = 68/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D+ G +H L +K + ++N + +YSKCG L+
Sbjct: 136 TLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT--------- 186
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A+ LFD+ + + VS+NT+I G A +LF+
Sbjct: 187 ----------------------EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFR 224
Query: 121 DMR-EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M+ ++ + + T+ ++ A + L +K+LH +I GF + V N + Y++
Sbjct: 225 EMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKC 284
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A+RVFY M E K SWN+++ Q+ + +AL L+ +M L D +T+ S+
Sbjct: 285 GMLICAERVFYSM-ETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSL 343
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A L+ L G + H +++ G +S IG L+ LY C G+ +F+ + +
Sbjct: 344 LLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHC-GESSSARLLFDGMEEKS 402
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
V WN MISGYSQ D AL F+KL G+ P D + V V+ ACS S LGK+ H
Sbjct: 403 SVSWNAMISGYSQNGLPED-ALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETH 461
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+K + + + V + + MY+K G ++++R +FD + + S N++IA Y HG G
Sbjct: 462 CYALKALLMED-VFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDG 520
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
E++ LFE M + P TF+ +L+ C+H G V EG KYF+ M++ G EP+ EHY+C
Sbjct: 521 EESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYAC 580
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
++D+LGRAG+L DA RL+ MP P S I A L+LEP N
Sbjct: 581 VMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKN 640
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV L+N+YA SG+W++V +R++++D G+QK G SWIE+ ++H FVA D P
Sbjct: 641 VENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQS 700
Query: 580 KEIHNYLEEMSRKMKQAGYVP---------DKEK---RLVHHSEKLAVAFGLLSTSYGEP 627
KE+ ++ +KM + GY P D+EK +L HSEKLA+ FGLL+T+ G
Sbjct: 701 KEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTT 760
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLRIC DCHNA KF+S + GREI +RD RFH FKDG CSCGDYW
Sbjct: 761 LRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 30/337 (8%)
Query: 209 HREGL--EALQLFQEMVS-LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
HR L +A+ +F ++++ + D +T ++ A T D G H +IK G +
Sbjct: 6 HRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLD 65
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+G+ LI +Y K G + +KVF +P +LV WN++ISG+S+ D CF L
Sbjct: 66 VFVGNALIAMYGK-FGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKD----CFDML 120
Query: 326 NRV-----GYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
+ G PD + V V+ C+ + +G +IH L +K+ + S + VNN+LV MY
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGL-SEDVRVNNSLVDMY 179
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNITF 438
SKCG L +A+ LFD+ N VS N+MI G G EA LF E ++ +I +T
Sbjct: 180 SKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTV 239
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+++L AC ++ K GF+ + + + + G L AER+ +M
Sbjct: 240 LNILPACLEISQL-RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSME 298
Query: 499 FNP--------GSIA-----LKAANHFLQLEPSNAVP 522
G A KA N ++Q+ S VP
Sbjct: 299 TKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVP 335
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/734 (34%), Positives = 390/734 (53%), Gaps = 78/734 (10%)
Query: 18 GKSLHALYLKNLVPFSAYLSNH--FILLYSKCGCLSAAHHAFNQTQHANVFSF----NVL 71
G S AL L + ++H F+ + C L+ N+ ++ + SF N L
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANAL 148
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
+ YAR + A+++F + D S+N +I A++ GD AL +FK+M+ +
Sbjct: 149 VTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNS 207
Query: 132 FTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
T +I+ S L +++H + GFD V +L+ Y + G EA+ VF +
Sbjct: 208 TTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M + +D VSWN M+ Y + + EAL+L+Q++ T SIL A +S++ L
Sbjct: 268 MKK-RDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG---------------------------- 281
G H+H+++ G + + L+++YAKC
Sbjct: 327 GRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 282 -----DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDC 335
D R KVF+ + D + WN MI+ Y Q + A+ F+++ G PD
Sbjct: 387 NGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNG-CAVAAMKIFREMTGAAGLKPDAV 445
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+F+ V+ AC++L S K +HA + E+ SN + V N L+ MY++CG+LE+A RLF
Sbjct: 446 TFIAVLEACASLGRLSEVKALHAQISESELESN-VVVTNTLINMYARCGSLEEAERLFAA 504
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
E VS +M+A ++Q+G EAL LF+ M + P ++T+ S+L C H G + +G
Sbjct: 505 AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-------- 506
+YF+ M ++ P +H++ M+DLLGR+G+L DA+ L+E+MPF P +A
Sbjct: 565 WRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR 624
Query: 507 ---------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
AA +L+PS+ PY+ ++NIYAA G WE+VA++R+ M +RG++K PG
Sbjct: 625 IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGL 684
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKR 605
S+IEV ++H F + HP EI L + M+ AGYVPD KE
Sbjct: 685 SFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETM 744
Query: 606 LVHHSEKLAVAFGLLST-SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L++HSEK+A+AFGL+S+ GEPI V+KNLR+C DCH A KFI+ IAGR+I VRD RFH
Sbjct: 745 LLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFH 804
Query: 665 CF-KDGRCSCGDYW 677
F DG+CSCGDYW
Sbjct: 805 RFSSDGKCSCGDYW 818
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 268/534 (50%), Gaps = 76/534 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C D+V G++LH + + N I +Y KC L
Sbjct: 9 TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSL---------- 58
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSL 118
AR +F+ + Q ++VS+N +I+AYA G + AL L
Sbjct: 59 ---------------------VDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVL 97
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ M + TD T ++ A S +L +++H Y G D + S+ N+L+T Y+R G
Sbjct: 98 YWRMNLQGLGTDHVTFVSVLGACS-SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFG 156
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +AKR+F + + +DE SWN++++A+ Q + AL++F+EM + + T +++
Sbjct: 157 SVGDAKRMFQSL-QTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVI 214
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ F++ E L G + HA ++ +GF + + + LI++Y KC G + +VF+++ + D+
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKC-GSSHEAREVFDKMKKRDM 273
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN MI Y ++ +AL ++KL+ G+ +FV ++ ACS++ + G+ +H+
Sbjct: 274 VSWNVMIGCYVLNGDFH-EALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLED------------------------------ 387
++ + S ++V ALV MY+KCG+LE+
Sbjct: 333 HILERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGK 391
Query: 388 ----ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVL 442
AR++FDR+ +T+S N+MI Y Q+G + A+++F M + P +TF++VL
Sbjct: 392 DARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVL 451
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
ACA G+++E + + + + E + +I++ R G L +AERL A
Sbjct: 452 EACASLGRLSEVKALHAQISES-ELESNVVVTNTLINMYARCGSLEEAERLFAA 504
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 222/471 (47%), Gaps = 67/471 (14%)
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLH 152
QPD V++ T++ + + CGD +L + +R RF+ D
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTM-------------------- 43
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEVSWNSMVVAYGQHRE 211
V N+L++ Y + L +A+ VF M ++ VSWN+M+ AY Q+
Sbjct: 44 -------------VGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGH 90
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EAL L+ M LG D T S+L A +SL G + H + SG + +
Sbjct: 91 STEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANA 147
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+ +YA+ G + D ++F+ + D WN +I +SQ ++S AL FK++ +
Sbjct: 148 LVTMYARF-GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSG-ALRIFKEM-KCDVK 204
Query: 332 PDDCSFVCVISACSNLSPSL---GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ +++ VIS S +P + G++IHA + ++ + V AL+ MY KCG+ +A
Sbjct: 205 PNSTTYINVISGFS--TPEVLPEGRKIHAEIVANGFDTDLV-VATALINMYGKCGSSHEA 261
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R +FD+M + + VS N MI Y +G EAL L++ + T TFVS+L AC+
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV 321
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+A+G+ S + + G + E + ++++ + G L +A ++ AM
Sbjct: 322 KALAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLEEARKVFNAM----------- 369
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+ +AV + L YA++G ++ R++ DR + + SW
Sbjct: 370 -------KNRDAVAWSTLIGAYASNGYGKDARKARKVF-DR-LGSRDTISW 411
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/689 (35%), Positives = 369/689 (53%), Gaps = 67/689 (9%)
Query: 11 GRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFN 69
GR + ++H L LK L +L NH + Y+K G L+ A F++ N+F+ N
Sbjct: 24 GRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRN 83
Query: 70 VLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFD 128
LL+A A + +LF +P+ D VSYN LI+ ++ G ++ L++ + RE+
Sbjct: 84 ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
TLS +I +S ++ L +HC + GF YA V + L+ Y++ G + +A+RV
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203
Query: 187 FYEMGEI------------------------------KDEVSWNSMVVAYGQHREGLEAL 216
F EM +D ++W +MV Q+ LEAL
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
+F+ M + +G+D YT SILTA +L L G Q HA++ ++ + N +GS L+D+Y
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
+KC +R VF + +++ W MI GY Q S++A+ F ++ G PDD +
Sbjct: 324 SKCR-SIRLAEAVFRRMTCRNIISWTAMIVGYGQNA-CSEEAVRAFSEMQMDGIKPDDFT 381
Query: 337 FVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
VIS+C+NL S G Q H L + + I+V+NALV +Y KCG++EDA RLFD M
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLAL-VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
H+ VS +++ GYAQ G E + LFE ML + P +TF+ VLSAC+ G V +G
Sbjct: 441 SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGC 500
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------ 503
YF M+ G P +HY+CMIDL R+G+ +AE I+ MP +P +
Sbjct: 501 DYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560
Query: 504 -----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
I AA + L+ +P N YV+L +++AA G+W EVA +RR MRDR V+K+PG S
Sbjct: 561 RGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCS 620
Query: 559 WIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRL 606
WI+ K ++H+F A+D SHP I+ LE ++ KM + GY P DK +
Sbjct: 621 WIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMI 680
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
HHSEKLA+AFGL+ PI ++KNLR
Sbjct: 681 SHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L GK +HA + + ++ + + +YSKC + A F +
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ +S+ +I Y +E A+ F
Sbjct: 340 TCRNI-------------------------------ISWTAMIVGYGQNACSEEAVRAFS 368
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D FTL +I++ +N L + Q HCLA+ G Y +V+N+L+T Y + G
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A R+F EM D+VSW ++V Y Q + E + LF++M++ L D T +L
Sbjct: 429 SIEDAHRLFDEM-SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVL 487
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-P 296
+A + + G + + K G + +IDLY++ SG ++ + +++P P
Sbjct: 488 SACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSR-SGRFKEAEEFIKQMPHSP 546
Query: 297 DLVLWNTMIS 306
D W T++S
Sbjct: 547 DAFGWATLLS 556
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 380/669 (56%), Gaps = 49/669 (7%)
Query: 55 HAFN-QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
HA+ + N F N L+A Y + ++AS++ L DLV++NT++S+
Sbjct: 225 HAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSL 170
AL ++M + + D FT+S ++ A S+ L K+LH A+ G D + V ++L
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGL 229
+ Y + +RVF M + K + WN+M+ Y Q+ EAL LF M S L
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ T+A ++ A H ++K G ++ + + L+D+Y++ G + M++
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL-GKIDIAMRI 462
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN----------RVGYHPDDCSFVC 339
F ++ DLV WNTMI+GY E + D L K N RV P+ + +
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
++ +C+ LS + GK+IHA IK + ++ ++V +ALV MY+KCG L+ +R++FD++P+
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
N ++ N +I Y HG G EA+ L M+ + P +TF+SV +AC+H+G V EG + F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP--FNPG-------------- 502
+MK +G EP +HY+C++DLLGRAG++ +A +L+ MP FN
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 503 --SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
I AA + +QLEP+ A YV+LANIY+++G W++ +RR M+++GV+K+PG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVH 608
E ++H FVA D SHP +++ YLE + +M++ GYVPD KE L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLA+AFG+L+TS G I V KNLR+C DCH A KFIS I REI +RD RFH FK+
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 669 GRCSCGDYW 677
G CSCGDYW
Sbjct: 882 GTCSCGDYW 890
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 267/572 (46%), Gaps = 77/572 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +LK +D+ GK +HA +Y S ++N + LY KCG A +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY------ 153
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++FD+I + + VS+N+LIS+ E AL F+
Sbjct: 154 -------------------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 121 DMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
M ++ + FTL ++TA SN L + KQ+H + G + + + N+L+ Y
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYG 247
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L +K + G +D V+WN+++ + Q+ + LEAL+ +EMV + D +T++
Sbjct: 248 KLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A + LE L G + HA+ +K+G +NS +GS L+D+Y C + +VF+ +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK-QVLSGRRVFDGMF 365
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ LWN MI+GYSQ E + L G + + V+ AC S +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
IH +K + +R V N L+ MYS+ G ++ A R+F +M + + V+ N+MI GY
Sbjct: 426 AIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 414 GIGMEALRLFEWM--LE---------TNIPPTNITFVSVLSACAHTGKVAEGQKY--FSM 460
+AL L M LE ++ P +IT +++L +CA +A+G++ +++
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
++ G S ++D+ + G L + ++ + +P N
Sbjct: 545 KNNLATDVAVG---SALVDMYAKCGCLQMSRKVFDQIP------------------QKNV 583
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + ++ Y G +E + R+M +GV+
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 193/417 (46%), Gaps = 60/417 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK LHA LKN G L
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKN-------------------GSLD--------- 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + L+ Y ++ S R++FD + + +N +I+ Y+ + AL LF
Sbjct: 336 --ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 121 DMREKR-FDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E + T++G++ A S + +H + G D V N+L+ YSR
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAY--GQHREGLEALQLFQEMVSLQ--------- 226
G +D A R+F +M E +D V+WN+M+ Y +H E +AL L +M +L+
Sbjct: 454 GKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHE--DALLLLHKMQNLERKVSKGASR 510
Query: 227 --LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L + TL +IL + +L L G + HA+ IK+ + +GS L+D+YAKC G ++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-GCLQ 569
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF++IPQ +++ WN +I Y +A+ + + G P++ +F+ V +AC
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGN-GQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 345 SNLSPSLGKQIHALTI-----KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
S+ S + + + + +E S+ + +V + + G +++A +L + MP
Sbjct: 629 SH-SGMVDEGLRIFYVMKPDYGVEPSSDHYA---CVVDLLGRAGRIKEAYQLMNMMP 681
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 11/290 (3%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGL 272
EA+ + +M+ L + D Y ++L A L+D+ G Q HAH+ K G+ +S + + L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
++LY KC GD KVF+ I + + V WN++IS E++ + AL F+ + P
Sbjct: 140 VNLYRKC-GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENVEP 197
Query: 333 DDCSFVCVISACSNLS-PS---LGKQIHALTI-KIEIRSNRISVNNALVAMYSKCGNLED 387
+ V V++ACSNL P +GKQ+HA + K E+ S I N LVAMY K G L
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII---NTLVAMYGKLGKLAS 254
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
++ L + V+ N++++ Q+ +EAL M+ + P T SVL AC+H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G++ + + S ++D+ ++ R+ + M
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ CV +++H +K + ++ N + +YS+ G + A F +
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ DLV++NT+I+ Y E AL L
Sbjct: 467 E-------------------------------DRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 121 DMR--EKR---------FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVN 167
M+ E++ + TL ++ A+ + L K++H AI +V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ Y++ G L +++VF ++ + K+ ++WN +++AYG H G EA+ L + M+ +
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T S+ A + + GL+ F+ G +S + ++DL + +G +++
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR-AGRIKEA 673
Query: 287 MKVFEEIPQ 295
++ +P+
Sbjct: 674 YQLMNMMPR 682
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/711 (34%), Positives = 391/711 (54%), Gaps = 71/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C ++L G+ +H+L +K + ++ + +YSKCG
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG------------ 363
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
L I A +F I +PD+V ++ LI+ G +E ++ LF
Sbjct: 364 ------------------LAI-DAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + +T+ L++A++N NL + +H GF+ +V+N+L+T Y +NG
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLAS 236
+ + +++ M + +D +SWN+ + G H G+ L +F M+ +MYT S
Sbjct: 465 CVHDGTKLYESMVD-RDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
IL + + L D+ G Q HAH+IK+ N+ + + LID+YAKC + D F +
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY-LEDADVAFNRLSVR 580
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
DL W +I+ Y+Q + ++AL F+++ + G P++ + +S CS+L S G+Q+
Sbjct: 581 DLFTWTVIITNYAQTNQ-GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H++ K S+ V +ALV MY+KCG +E+A LF+ + +T++ N++I GYAQ+G
Sbjct: 640 HSMVFKSGHVSDMF-VGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQ 698
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +AL F ML+ I P +TF +LSAC+H G V EG+++F+ M FG P +H +
Sbjct: 699 GNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCA 758
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS 518
CM+D+LGR GK + E I+ M + ++ KAAN +L+P
Sbjct: 759 CMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPE 818
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
Y++L+NI+A G+W++V +R LM +GV+K+PG SW+E Q+H FV+ D SHP
Sbjct: 819 EESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQ 878
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
I+EIH L+E+ R++ YVP +K++ L HSE+LA+ F L+STS +
Sbjct: 879 IQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEK 938
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLRIC DCH+ +K IS+I +EI VRD RFH FK+G CSC D+W
Sbjct: 939 KIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 150/547 (27%), Positives = 250/547 (45%), Gaps = 47/547 (8%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA-------- 74
++YL + + N F L C + HA F +LL
Sbjct: 197 SIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVD 256
Query: 75 -YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
YA+ I A ++F +P+ + V++N L++ YA GD L LF M E + FT
Sbjct: 257 LYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFT 316
Query: 134 LSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
L+ ++ A+S NL + +H L I CG++ + L+ YS+ G +A VF +
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK 376
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+ D V W++++ Q + E+++LF M + YT+ S+L+A T+ +L G
Sbjct: 377 K-PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HA + K GF + + + L+ +Y K +G + D K++E + DL+ WN +SG
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMK-NGCVHDGTKLYESMVDRDLISWNAYLSGLHDC 494
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRIS 370
Y D+ L F + G+ P+ +F+ ++ +CS L G+Q+HA IK ++ N
Sbjct: 495 GMY-DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF- 552
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V AL+ MY+KC LEDA F+R+ + + +I YAQ G +AL F M +
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSM------MKDMFGFEPEGEHYSCMIDLLGRA 484
+ P T LS C+ + GQ+ SM + DMF S ++D+ +
Sbjct: 613 VKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFV-------GSALVDMYAKC 665
Query: 485 GKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
G + +AE L EA L + + + + YA +G+ + T R
Sbjct: 666 GCMEEAEALFEA------------------LIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 545 LMRDRGV 551
+M D G+
Sbjct: 708 MMLDEGI 714
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 271/559 (48%), Gaps = 67/559 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+ C +R L K++H L +K+++ ++L + +Y+KC
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKC-------------- 160
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
Y+ A AR + ++P D+VS+ LI G ++ LF++
Sbjct: 161 ------------RYS-----AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI----KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+ + + FTL+ + A S LC+ KQ+H A G V ++L+ Y++
Sbjct: 204 MQNEGIMPNEFTLATGLKACS--LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC 261
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ A ++F M E +++V+WN ++ Y Q + L+LF M+ L + + +TL ++
Sbjct: 262 GEIELASKMFIGMPE-QNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + ++L G H+ +IK G+ N IG GL+D+Y+KC G D + VF+ I +PD
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC-GLAIDAIGVFKTIKKPD 379
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+V+W+ +I+ Q+ + S++++ F + P+ + ++SA +N G+ IH
Sbjct: 380 IVVWSALITCLDQQGQ-SEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIH 438
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A K ++ ++V+NALV MY K G + D +L++ M + + +S N+ ++G G+
Sbjct: 439 ACVWKYGFETD-VAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYS 475
L +F MLE P TF+S+L +C+ V G Q + ++K+ + ++
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL----DDNNFV 553
Query: 476 C--MIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
C +ID+ + L DA+ + FN +L + + ++ YA +
Sbjct: 554 CTALIDMYAKCMYLEDAD-----VAFN-------------RLSVRDLFTWTVIITNYAQT 595
Query: 534 GKWEEVATIRRLMRDRGVQ 552
+ E+ R M+ GV+
Sbjct: 596 NQGEKALNYFRQMQQEGVK 614
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/663 (37%), Positives = 383/663 (57%), Gaps = 39/663 (5%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
CLS + + A+ F L+ AY+ + +ARQ+FD I D+VS+ +++ YA+
Sbjct: 123 CLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAE 182
Query: 109 CGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYAS 165
E +L LF MR + + FT+S + S N L K +H A+ +D
Sbjct: 183 NYCHEDSLLLFCQMRIMGYRPNNFTISAALK-SCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V +LL Y+++G + EA++ F EM + D + W+ M+ Y Q + EAL+LF M
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPK-DDLIPWSLMISRYAQSDKSKEALELFCRMRQS 300
Query: 226 QLGL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + + +T AS+L A SL L G Q H+ ++K G N + + L+D+YAKC G++
Sbjct: 301 SVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKC-GEIE 359
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+ +K+F + + V WNT+I GY Q + ++AL F + + P + ++ V+ A
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGD-GEKALNLFSNMLGLDIQPTEVTYSSVLRAS 418
Query: 345 SNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
++L + G+QIH+LTIK + + V N+L+ MY+KCG ++DAR FD+M + + VS
Sbjct: 419 ASLVALEPGRQIHSLTIKTMYNKDSV-VANSLIDMYAKCGRIDDARLTFDKMDKQDEVSW 477
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N++I GY+ HG+GMEAL LF+ M ++N P +TFV VLSAC++ G + +G+ +F M
Sbjct: 478 NALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQ 537
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA--------------- 508
+G EP EHY+CM+ LLGR+G+ +A +LI +PF P + +A
Sbjct: 538 DYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGK 597
Query: 509 --ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
A L++EP + +V+L+N+YA + +W+ VA +R+ M+ + V+K+PG SW+E + +
Sbjct: 598 VCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVV 657
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H F D SHP IK I LE + +K + AGYVPD KE+ L HSE+LA
Sbjct: 658 HYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLA 717
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGL+ G I ++KNLRIC DCH IK +S I REI +RD RFH F+ G CSCG
Sbjct: 718 LAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCG 777
Query: 675 DYW 677
DYW
Sbjct: 778 DYW 780
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 175/349 (50%), Gaps = 37/349 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T LK+C G GKS+H LK Y+ + LY+K G ++ A
Sbjct: 207 TISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEA------- 259
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+Q F+++P+ DL+ ++ +IS YA ++ AL LF
Sbjct: 260 ------------------------QQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFC 295
Query: 121 DMREKRFDT-DGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR+ + FT + ++ A ++ L L Q+H + G D V+N+L+ Y++
Sbjct: 296 RMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKC 355
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ + ++F E K+EV+WN+++V Y Q +G +AL LF M+ L + T +S+
Sbjct: 356 GEIENSVKLFTGSTE-KNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSV 414
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A SL L G Q H+ IK+ ++++S + + LID+YAKC G + D F+++ + D
Sbjct: 415 LRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKC-GRIDDARLTFDKMDKQD 473
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
V WN +I GYS +AL F + + P+ +FV V+SACSN
Sbjct: 474 EVSWNALICGYS-IHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSN 521
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+ C L G +H+ LK + + ++SN + +Y+KCG
Sbjct: 309 TFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG------------ 356
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I ++ +LF + + V++NT+I Y GD E AL+LF
Sbjct: 357 -------------------EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFS 397
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M T S ++ AS++ + L +Q+H L I ++ + V NSL+ Y++ G
Sbjct: 398 NMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCG 457
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+ F +M + +DEVSWN+++ Y H G+EAL LF M + T +L
Sbjct: 458 RIDDARLTFDKMDK-QDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVL 516
Query: 239 TAFTSLEDLVGG-LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A ++ L G F + L G + ++ L + SG + +K+ EIP QP
Sbjct: 517 SACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGR-SGQFDEAVKLIGEIPFQP 575
Query: 297 DLVLWNTMISG 307
+++W ++
Sbjct: 576 SVMVWRALLGA 586
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/645 (37%), Positives = 366/645 (56%), Gaps = 41/645 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + I +A +F +P D VS+N++IS E A+S F M+
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
F++ +++ S+ L L +Q+H G D SV+N+LLT Y+ ++E ++V
Sbjct: 555 PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKV 614
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREG-LEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F++M E D+VSWNS + A ++ L+AL+ F EM+ + T +IL A +S
Sbjct: 615 FFQMPEY-DQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFS 673
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
L G Q HA ++K ++ I + L+ Y KC M DC +F + + D V WN+M
Sbjct: 674 VLGLGHQIHALILKYSVADDNAIENALLAFYGKCE-QMEDCEIIFSRMSERRDEVSWNSM 732
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY +A+ + + G D +F V+SAC++++ G ++HA ++
Sbjct: 733 ISGYLH-SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRAC 791
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MY+KCG ++ A R F+ MP N S NSMI+GYA+HG G +AL++F
Sbjct: 792 LESD-VVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIF 850
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M + P ++TFV VLSAC+H G V EG K+F M +++G P EH+SCM+DLLGR
Sbjct: 851 TRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGR 910
Query: 484 AGKLTDAERLIEAMPFNPG-------------------SIALKAANHFLQLEPSNAVPYV 524
AG + E I+ MP +P + +AA ++LEP NAV YV
Sbjct: 911 AGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYV 970
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N++AA G WE+V R MR V+K G SW+ +K +H+FVA D +HP ++I+
Sbjct: 971 LLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYE 1030
Query: 585 YLEEMSRKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVMK 632
L+E+ K++ AGYVP+ + L +HSEKLA+AF +L+ PI +MK
Sbjct: 1031 KLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMK 1089
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCH A K+IS I GR+I +RD+ RFH F G CSCGDYW
Sbjct: 1090 NLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 272/567 (47%), Gaps = 57/567 (10%)
Query: 6 LKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC-GCLSAAHHAFNQTQH 62
L+ C G + G +HA K LSN + +YS C G + AH F++ +
Sbjct: 248 LRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKF 307
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N ++N +++ Y R+ SA +LF + Q + V N + Y C +A SL
Sbjct: 308 RNSVTWNSIISVYCRRGDAVSAFKLF-SVMQMEGVELNLRPNEYTLCSLVTAACSL---- 362
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ L L++Q+ GF V ++L+ ++R G +D
Sbjct: 363 ------------------ADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDC 404
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
AK +F +M + ++ V+ N ++V + +G EA ++F+EM L + ++ +L +L+ FT
Sbjct: 405 AKMIFKQMYD-RNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFT 462
Query: 243 SLEDLV----GGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+L G + HA+L +SG IG+ L+++Y KC+ C VF+ +P D
Sbjct: 463 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNAC-SVFQLMPSKD 521
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
V WN+MISG E + ++A+ CF + R G P + S + +S+CS+L +LG+QIH
Sbjct: 522 TVSWNSMISGLDHNERF-EEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIH 580
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
K + + +SV+NAL+ +Y++ ++ + +++F +MPE++ VS NS I A++
Sbjct: 581 GEGFKWGLDLD-VSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEAS 639
Query: 417 -MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
++AL+ F M++ P +TF+++L+A + + G + +++ + + +
Sbjct: 640 VLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDNAIEN 698
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
++ G+ ++ D E + M E + V + + + Y SG
Sbjct: 699 ALLAFYGKCEQMEDCEIIFSRMS-----------------ERRDEVSWNSMISGYLHSGI 741
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEV 562
+ + M RG QK GF++ V
Sbjct: 742 LHKAMDLVWPMMQRG-QKLDGFTFATV 767
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 256/503 (50%), Gaps = 42/503 (8%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF N L+ Y R + SAR+LFD++PQ +LVS++ LIS Y + A SLFK +
Sbjct: 174 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 233
Query: 124 EKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYAS--VNNSLLTCYSR- 176
+ F + + A S + L Q+H A C + ++N L++ YS
Sbjct: 234 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIH--AFICKLPCVSDMILSNVLMSMYSDC 291
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM----VSLQLGLDMY 232
+G +D+A RVF E+ + ++ V+WNS++ Y + + + A +LF M V L L + Y
Sbjct: 292 SGSIDDAHRVFDEI-KFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEY 350
Query: 233 TLASILTAFTSLED--LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK-V 289
TL S++TA SL D LV Q + KSGF ++ ++GS L++ +A+ + DC K +
Sbjct: 351 TLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG--LMDCAKMI 408
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS- 348
F+++ + V N ++ G +++ + ++A FK++ + + S V ++S + S
Sbjct: 409 FKQMYDRNAVTMNGLMVGLARQHQ-GEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSN 466
Query: 349 ----PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
G+++HA + + RIS+ NALV MY KC +++A +F MP +TVS N
Sbjct: 467 LKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWN 526
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
SMI+G + EA+ F M + P+N + +S LS+C+ G + G++
Sbjct: 527 SMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG-EGFK 585
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP------FNP--GSIA------LKAAN 510
+G + + + ++ L + + +++ MP +N G++A L+A
Sbjct: 586 WGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALK 645
Query: 511 HFLQLEPSNAVP-YVMLANIYAA 532
+FL++ + P V NI AA
Sbjct: 646 YFLEMMQAGWRPNRVTFINILAA 668
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 17/327 (5%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+S++L LH GF N+L+ Y R G L A+++F EM + K+ VSW+
Sbjct: 152 TSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQ-KNLVSWS 210
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL--EDLVGGLQFHAHLI 258
++ Y Q+R EA LF+ ++S L + + + S L A + G+Q HA +
Sbjct: 211 CLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFIC 270
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
K + + + L+ +Y+ CSG + D +VF+EI + V WN++IS Y ++ + A
Sbjct: 271 KLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGD----A 326
Query: 319 LGCFKKLN-------RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS--NRI 369
+ FK + + P++ + +++A +L+ + + +IE +
Sbjct: 327 VSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDL 386
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V +ALV +++ G ++ A+ +F +M + N V++N ++ G A+ G EA ++F+ M +
Sbjct: 387 YVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL 446
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + + V +LS + EG++
Sbjct: 447 -VEINSESLVVLLSTFTEFSNLKEGKR 472
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L L G +HAL LK V + N + Y KC + F+
Sbjct: 661 TFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFS-- 718
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R++ R D VS+N++IS Y G A+ L
Sbjct: 719 -------------------RMSERR---------DEVSWNSMISGYLHSGILHKAMDLVW 750
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ DGFT + +++A ++ L + ++H A+ + V ++L+ Y++ G
Sbjct: 751 PMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCG 810
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A R F+E+ +++ SWNSM+ Y +H G +AL++F M D T +L
Sbjct: 811 KIDYASR-FFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVL 869
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG------------SGLIDLYAKCSGDMRDC 286
+A + H L+ G+ +G S ++DL + +GD++
Sbjct: 870 SACS-----------HVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGR-AGDVKKI 917
Query: 287 MKVFEEIP-QPDLVLWNTMI 305
+ +P P++++W T++
Sbjct: 918 EDFIKTMPMDPNILIWRTVL 937
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/631 (36%), Positives = 368/631 (58%), Gaps = 38/631 (6%)
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI 138
L I SAR +FD++ +LV++ +I+ Y+ G + A+ LF + + D FTL+ L+
Sbjct: 196 LDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLL 255
Query: 139 TASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
+A L KQLH I G V +L+ Y+++ ++ ++++F M +
Sbjct: 256 SACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLH-HNV 314
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
+SW +++ Y Q R+ EA++LF M+ + + +T +S+L A SL D G Q H
Sbjct: 315 MSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQ 374
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
IK G + +G+ LI++YA+ SG M K F + + +L+ +NT ++ + SD
Sbjct: 375 TIKLGLSTINCVGNSLINMYAR-SGTMECARKAFNILFEKNLISYNTAADANAKALD-SD 432
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNAL 375
++ + VG P ++ C++S + + + G+QIHAL +K +N + +NNAL
Sbjct: 433 ESFNHEVEHTGVGASP--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN-LCINNAL 489
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
++MYSKCGN E A ++F+ M N ++ S+I+G+A+HG +AL LF MLE + P
Sbjct: 490 ISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNE 549
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+T+++VLSAC+H G + E K+F+ M P EHY+CM+DLLGR+G L +A I
Sbjct: 550 VTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFIN 609
Query: 496 AMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
+MPF+ ++ + AA L+ EP + Y++L+N+YA+ G+W++
Sbjct: 610 SMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDD 669
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
VA +R+ M+ + + K+ G+SWIEV Q+H F D SHP ++I++ L+E++ K+K GY
Sbjct: 670 VAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGY 729
Query: 599 VPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
+P+ KE+ L HSEK+AVA+ L+ST +PI V KNLR+CGDCH AIK+
Sbjct: 730 IPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKY 789
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + GREI VRD RFH KDG+CSC DYW
Sbjct: 790 ISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 222/471 (47%), Gaps = 44/471 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+LK C+ +L GK LH + + +P + L N I LYSKCG A F H
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH-- 102
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ DLVS++ +IS +A+ AL F M +
Sbjct: 103 ---------------------------HKRDLVSWSAIISCFANNSMESRALLTFLHMLQ 135
Query: 125 KRFDT---DGFTLSGLITASSNNLCLIKQLHCLAIYCG---FDHYASVNNSLLTCYSRNG 178
+ + + + L+ + SN L L A FD + V +L+ +++ G
Sbjct: 136 CSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGG 195
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ R+ ++ + K+ V+W M+ Y Q +A+ LF ++ + D +TL S+L
Sbjct: 196 LDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLL 255
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A LE G Q H+ +I+SG + +G L+D+YAK S + + K+F + ++
Sbjct: 256 SACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAK-SAAVENSRKIFNTMLHHNV 314
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W +ISGY Q + +A+ F + P+ +F V+ AC++L +GKQ+H
Sbjct: 315 MSWTALISGYVQSRQ-EQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
TIK+ + S V N+L+ MY++ G +E AR+ F+ + E N +S N+ A+ +
Sbjct: 374 QTIKLGL-STINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAK---AL 429
Query: 418 EALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM-KDMFG 466
++ F +E T + + T+ +LS A G + +G++ +++ K FG
Sbjct: 430 DSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFG 480
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 23/357 (6%)
Query: 119 FKDMREKRFDTDGFTLSGLITAS--------SNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
F+ +R+ D T S LI +S S NL L K LH I G + + NSL
Sbjct: 21 FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+T YS+ G + A +F MG K D VSW++++ + + AL F M+ +
Sbjct: 81 ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140
Query: 230 ---DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI--GSGLIDLYAKCSGDMR 284
+ Y ++L + ++ GL A L+K+G+ +SH+ G LID++ K D++
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYF-DSHVCVGCALIDMFTKGGLDIQ 199
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
VF+++ +LV W MI+ YSQ D A+ F +L Y PD + ++SAC
Sbjct: 200 SARMVFDKMQHKNLVTWTLMITRYSQL-GLLDDAVDLFCRLLVSEYTPDKFTLTSLLSAC 258
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
L SLGKQ+H+ I+ + S+ + V LV MY+K +E++R++F+ M HN +S
Sbjct: 259 VELEFFSLGKQLHSWVIRSGLASD-VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSW 317
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH-----TGKVAEGQ 455
++I+GY Q EA++LF ML ++ P TF SVL ACA GK GQ
Sbjct: 318 TALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQ 374
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 177/338 (52%), Gaps = 10/338 (2%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF L+ YA+ + ++R++F+ + +++S+ LIS Y + A+ LF +M
Sbjct: 281 SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNM 340
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ FT S ++ A ++ + + KQLH I G V NSL+ Y+R+G +
Sbjct: 341 LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTM 400
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+ A++ F + E K+ +S+N+ A + + E+ E+ +G +T A +L+
Sbjct: 401 ECARKAFNILFE-KNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSG 457
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ +V G Q HA ++KSGF N I + LI +Y+KC G+ ++VF ++ +++
Sbjct: 458 AACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKC-GNKEAALQVFNDMGYRNVIT 516
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHAL 358
W ++ISG++ K ++ +AL F ++ +G P++ +++ V+SACS+ L K +++
Sbjct: 517 WTSIISGFA-KHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSM 575
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
I S R+ +V + + G L +A + MP
Sbjct: 576 HYNHSI-SPRMEHYACMVDLLGRSGLLLEAIEFINSMP 612
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 177/415 (42%), Gaps = 64/415 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C D GK LH +K + + N I +Y++ G + A AFN
Sbjct: 351 TFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFN-- 408
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LF++ +L+SYNT A A D++ + +
Sbjct: 409 -------------------------ILFEK----NLISYNTAADANAKALDSDESFN--H 437
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ FT + L++ ++ ++K Q+H L + GF +NN+L++ YS+ G
Sbjct: 438 EVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCG 497
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A +VF +MG ++ ++W S++ + +H +AL+LF EM+ + + + T ++L
Sbjct: 498 NKEAALQVFNDMG-YRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVL 556
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG------SGLIDLYAKCSGDMRDCMKVFEE 292
+A + + GL A + H N I + ++DL + SG + + ++
Sbjct: 557 SACSHV-----GLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGR-SGLLLEAIEFINS 610
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+P D ++W T + K L R + P +++ + SNL S
Sbjct: 611 MPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDP--ATYILL----SNLYASE 664
Query: 352 GKQIHALTIKIEIRSNR---------ISVNNALVAMYSKCGNLEDARRLFDRMPE 397
G+ ++ ++ + I V+N + + + AR+++D + E
Sbjct: 665 GRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDE 719
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 360/658 (54%), Gaps = 43/658 (6%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A Q +++ L+ YA+ A+QLF + DLV+++ +I+A G E A
Sbjct: 355 ALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEA 414
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
LSLF++M+ ++ + TL ++ A ++ L L K +HC + D S +L++
Sbjct: 415 LSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSM 474
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ GF A F M +D V+WNS++ Y Q + A+ +F ++ + D T
Sbjct: 475 YAKCGFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ ++ A L DL G H ++K GF + H+ + LID+YAKC G + +F +
Sbjct: 534 MVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC-GSLPSAEFLFNKT 592
Query: 294 P-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D V WN +I+ Y Q ++ +A+ F ++ +HP+ +FV V+ A + L+
Sbjct: 593 DFTKDEVTWNVIIAAYMQNG-HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 651
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G HA I++ SN + V N+L+ MY+KCG L+ + +LF+ M +TVS N+M++GYA
Sbjct: 652 GMAFHACIIQMGFLSNTL-VGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 710
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG G A+ LF M E+ + +++FVSVLSAC H G V EG+K F M D + +P+
Sbjct: 711 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDL 770
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP--------------------GSIALKAANH 511
EHY+CM+DLLGRAG + I+ MP P G +AL +H
Sbjct: 771 EHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVAL---DH 827
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
++LEP N +V+L++IYA SG+W + R M D G++K PG SW+E+K ++H F
Sbjct: 828 LVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRV 887
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGL 619
D SHP ++ +H + KM++ GYVP DKE L HSE+LA+ F L
Sbjct: 888 GDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFAL 947
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+T G I ++KNLR+C DCH KFIS I R I VRD RFH F+DG CSC DYW
Sbjct: 948 LNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 41/507 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G +L G H + + ++ + +YSK G L
Sbjct: 131 TFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLK--------- 181
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR++FD++P+ D+V++N +I+ + D A+ F+
Sbjct: 182 ----------------------RAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFR 219
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + +L L +N+ L + +H F ++V+N L+ YS+ G
Sbjct: 220 SMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCG 277
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+RVF +M + +D+VSW +M+ Y + +E L+LF +M + ++ + S
Sbjct: 278 DVDVARRVFDQMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A DL G + H ++ + + + L+ +YAKC G+ ++F + DL
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC-GETEKAKQLFWGLQGRDL 395
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V W+ +I+ Q Y ++AL F+++ P+ + + ++ AC++LS LGK IH
Sbjct: 396 VAWSAIIAALVQT-GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
T+K ++ S+ +S ALV+MY+KCG A F+RM + V+ NS+I GYAQ G
Sbjct: 455 FTVKADMDSD-LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ +F + + I P T V V+ ACA + +G ++ + GFE + + +
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNAL 572
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSI 504
ID+ + G L AE L F +
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 179/320 (55%), Gaps = 8/320 (2%)
Query: 138 ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
+ +S +L + Q+H I GF H+ S+ + L+ YS D A+ VF + +
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF-DSTPNPSRI 95
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
WNSM+ AY + ++ EAL+++ MV L D YT +L A T +L G+ FH +
Sbjct: 96 LWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEI 155
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+ G ++ IG+GL+D+Y+K GD++ +VF+++P+ D+V WN MI+G SQ E+ +
Sbjct: 156 DRRGLERDVFIGAGLVDMYSKM-GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPC-E 213
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F+ + VG P S + + LS L + IH + + S +V+N L+
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS---AVSNGLI 270
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+YSKCG+++ ARR+FD+M + + VS +M+AGYA +G +E L LF+ M N+ +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Query: 437 TFVSVLSACAHTGKVAEGQK 456
+ VS A A T + +G++
Sbjct: 331 SAVSAFLAAAETIDLEKGKE 350
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 192/386 (49%), Gaps = 11/386 (2%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR +FD P P + +N++I AY AL ++ M EK + D +T + ++ A +
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 144 NLCLIKQL--HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L + + H G + + L+ YS+ G L A+ VF +M + +D V+WN+
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNA 200
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Q + EA+ F+ M + + +L ++ L ++ H ++ +
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRD 260
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
F +S + +GLIDLY+KC GD+ +VF+++ D V W TM++GY+ + + L
Sbjct: 261 F--SSAVSNGLIDLYSKC-GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV-EVLEL 316
Query: 322 FKKLNRVGYHPDDCSFVCV-ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F K+ + S V ++A + GK+IH ++ I S+ I V L+ MY+
Sbjct: 317 FDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD-ILVATPLMVMYA 375
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG E A++LF + + V+ +++IA Q G EAL LF+ M + P +T +S
Sbjct: 376 KCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMS 435
Query: 441 VLSACAHTGKVAEGQKY--FSMMKDM 464
+L ACA + G+ F++ DM
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADM 461
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 213/472 (45%), Gaps = 46/472 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GKS+H +K + + +Y+KCG +AA FN+
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ + +N+LI+ YA GD +A+ +F
Sbjct: 492 SSRDIVT-------------------------------WNSLINGYAQIGDPYNAIDMFY 520
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R + D T+ G++ A + N+L +H L + GF+ V N+L+ Y++ G
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+ +F + KDEV+WN ++ AY Q+ EA+ F +M + T S+L
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L G+ FHA +I+ GF N+ +G+ LID+YAKC G + K+F E+ D
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKC-GQLDYSEKLFNEMDHKDT 699
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIH 356
V WN M+SGY+ + D+A+ F + D SFV V+SAC + L K H
Sbjct: 700 VSWNAMLSGYAV-HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFH 758
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
+++ K I+ + + +V + + G ++ MP E + +++ H
Sbjct: 759 SMSDKYHIKPD-LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH-- 815
Query: 416 GMEALRLFEWMLE--TNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKDM 464
++L E L+ + P N VLS+ A +G+ A+ K S M D+
Sbjct: 816 --SNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 865
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/653 (36%), Positives = 367/653 (56%), Gaps = 52/653 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F N L+ Y + + A +FD + D V++N +I YA G +F MR
Sbjct: 239 TTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR 298
Query: 124 EKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
G LS + ++ LC KQLHC + G++ + +L+ YS+
Sbjct: 299 -----LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+DEA ++F + V+W +M+ + Q+ +A+ LF +M + + +T ++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L S L+ Q HA +IK+ + + + + L+D Y K +G++ + +VF IP
Sbjct: 414 VLAGKPS--SLLS--QLHAQIIKAYYEKVPSVATALLDAYVK-TGNVVESARVFYSIPAK 468
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQ 354
D+V W+ M++G +Q + S++A+ F +L + G P++ +F VI+ACS+ + ++ GKQ
Sbjct: 469 DIVAWSAMLTGLAQTRD-SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQ 527
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHA +K +SN + V++AL+ MYSK GN+E A ++F R E + VS NSMI GY QHG
Sbjct: 528 IHATAVK-SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+AL +F+ M +P ++TF+ VL+AC H G V EG+KYF++M + + + EHY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY 646
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS------------------IALKAANHFLQLE 516
SCM+DL RAG A +I MPF P S + AA + L+
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPF-PASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQ 705
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P++AV YV+L+NI+A +G WEE A +R+LM +R V+K+ G SWIE+K ++ F+A D SH
Sbjct: 706 PNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSH 765
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P ++ LEE+S K+K GY PD KE L HSE+LA+A+GL++
Sbjct: 766 PFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPP 825
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI + KNLRICGDCHN I+ IS I R + VRD+ RFH FK G CSCG YW
Sbjct: 826 GAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 214/457 (46%), Gaps = 17/457 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L ++ H H + F ++ L + R A QLFD+ P D+ YN L+ ++
Sbjct: 21 GRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFS 80
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS 165
AL LFKD+ DG TLS + + + +Q+HC ++ GF S
Sbjct: 81 RNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVS 140
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V SL+ Y + ++ + +F EMG IK+ VSW S++ Y ++ E + L +M
Sbjct: 141 VGTSLVDMYMKTEDFEDGRGIFDEMG-IKNVVSWTSLLSGYARNGLNDEVIHLINQMQME 199
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +T A++L A + GG+Q HA ++K+GF + + + LI +Y K S + D
Sbjct: 200 GVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLK-SEMVGD 258
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF+ + D V WN MI GY+ Y + F ++ G F + CS
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYL-EGFQMFHRMRLAGVKLSRTVFCTALKLCS 317
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSL 403
+ KQ+H +K + + AL+ YSKC ++++A +LF HN V+
Sbjct: 318 QQRELNFTKQLHCGVVKNGYEFAQ-DIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE--GQKYFSMM 461
+MI G+ Q+ +A+ LF M + P + T+ +VL+ GK + Q + ++
Sbjct: 377 TAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA-----GKPSSLLSQLHAQII 431
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
K + P + ++D + G + ++ R+ ++P
Sbjct: 432 KAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIP 466
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/651 (38%), Positives = 367/651 (56%), Gaps = 46/651 (7%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ VF N L+ YA+ + AR +F + D+VS+NTL++ G AL LF D
Sbjct: 238 STVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDS 297
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R T + +I +N L L +QLH + GF Y +V +L+ YS+ G L
Sbjct: 298 RSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQL 357
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A +F M ++ VSW +M+ Q+ + A LF M + + +T ++ILTA
Sbjct: 358 GNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Query: 241 -FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
SL Q HA +IK+ + S +G+ L+ Y+K + + + +F+ I Q D+V
Sbjct: 418 SVASLPP-----QIHAQVIKTNYECTSIVGTALLASYSKLC-NTEEALSIFKMIDQKDVV 471
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS----LGKQI 355
W+ M++ Y+Q + SD A F K+ G P++ + VI AC+ SP+ LG+Q
Sbjct: 472 SWSAMLTCYAQAGD-SDGATNIFIKMTMHGLKPNEFTISSVIDACA--SPTAGVDLGRQF 528
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA++IK + + V++ALV+MY++ G++E A+ +F+R + + VS NSM++GYAQHG
Sbjct: 529 HAISIKHRCH-DALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGY 587
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
+AL +F M I +TF+SV+ CAH G V EGQ+YF M +G P EHY+
Sbjct: 588 SQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYA 647
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPS 518
CM+DL RAGKL +A LIE M F G + + AA L LEP
Sbjct: 648 CMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPF 707
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ YV+L+NIY+A+GKW+E +R+LM + V+K+ G SWI++K ++H F+A D SHP+
Sbjct: 708 DSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPL 767
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
++I+ L M+ K+KQ GY PD KE L HSE+LA+AFGL++T G
Sbjct: 768 SEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGA 827
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ + KNLR+CGDCH IK +S I REI +RD RFH F G CSCGD+W
Sbjct: 828 PLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 216/460 (46%), Gaps = 41/460 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK C D V GK LH L C+ H +
Sbjct: 109 VLKVCGSVPDRVLGKQLHGL------------------------CIRCGH------DRGD 138
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V L+ Y + + R++F+ +P+ ++V++ +L++ Y G + LF MR
Sbjct: 139 VGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRA 198
Query: 125 KRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + T + + + AS + L +++H ++ G V NSL+ Y++ G ++E
Sbjct: 199 EGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEE 258
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF M E +D VSWN+++ + LEALQLF + S L T A+++
Sbjct: 259 ARVVFCGM-ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLW 301
+++ L Q H+ ++K GFH ++ + L+D Y+K +G + + + +F + ++V W
Sbjct: 318 NIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK-AGQLGNALDIFLLMSGSQNVVSW 376
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
MI+G Q + A F ++ G P+D ++ +++A SL QIHA IK
Sbjct: 377 TAMINGCIQNGDVP-LAAALFSRMREDGVAPNDFTYSTILTAS---VASLPPQIHAQVIK 432
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
I V AL+A YSK N E+A +F + + + VS ++M+ YAQ G A
Sbjct: 433 TNYECTSI-VGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATN 491
Query: 422 LFEWMLETNIPPTNITFVSVLSACAH-TGKVAEGQKYFSM 460
+F M + P T SV+ ACA T V G+++ ++
Sbjct: 492 IFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAI 531
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 174/370 (47%), Gaps = 18/370 (4%)
Query: 84 ARQLFDQIPQPDLVSYNTLISA---YADCGDTESALSLFKDM-REKRFDTDGFTLSGL-- 137
ARQ FD+IP NTL A +A G AL F D+ R G L G+
Sbjct: 57 ARQAFDEIPH-----RNTLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLK 111
Query: 138 ITASSNNLCLIKQLHCLAIYCGFDHY-ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
+ S + L KQLH L I CG D V SL+ Y + + + ++VF M + ++
Sbjct: 112 VCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK-RNV 170
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
V+W S++ Y Q + ++LF M + + + T AS+L+ S + G + HA
Sbjct: 171 VTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQ 230
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+K G + + L+++YAKC G + + VF + D+V WNT+++G +
Sbjct: 231 SVKFGCCSTVFVCNSLMNMYAKC-GLVEEARVVFCGMETRDMVSWNTLMAGLVLN-GHDL 288
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
+AL F ++ VI C+N+ L +Q+H+ +K S +V AL
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYG-NVMTAL 347
Query: 376 VAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
+ YSK G L +A +F M N VS +MI G Q+G A LF M E + P
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407
Query: 435 NITFVSVLSA 444
+ T+ ++L+A
Sbjct: 408 DFTYSTILTA 417
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCV 340
D + F+EIP + + + + ++++ QAL F ++R G + V V
Sbjct: 53 DATGARQAFDEIPHRNTL--DHALFDHARRGSV-HQALDHFLDVHRCHGGRVGGGALVGV 109
Query: 341 ISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+ C ++ LGKQ+H L I+ + V +LV MY K ++ D R++F+ MP+ N
Sbjct: 110 LKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRN 169
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
V+ S++ GY Q G + + LF M + P ++TF SVLS A G V G++
Sbjct: 170 VVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR 226
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 380/703 (54%), Gaps = 73/703 (10%)
Query: 9 CVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFS 67
C D+ K L + ++L P ++ N + LY+K G +S A F++ + FS
Sbjct: 32 CFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFS 91
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
+N +L+ YA+ + R +FD +P D VSYNT+IS +A G AL +F M+++
Sbjct: 92 WNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL 151
Query: 128 DTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+T ++ A + L L KQ+H I C V N+L Y+R G +D+A+R
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARR 211
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F M I++ V+WN M+ Y ++R+ + + LF EM L D T +S+L A+
Sbjct: 212 LFDRM-VIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAY---- 266
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
I +G ID + KVF EI + D V W MI
Sbjct: 267 ----------------------IQAGYID----------EARKVFGEIREKDEVCWTIMI 294
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEI 364
G +Q + D AL F ++ PD + V+S+C+ L+ G+ +H + +
Sbjct: 295 VGCAQNGKEED-ALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ + V++ALV MY KCG DA +F M N VS NSMI GYA +G +EAL L+E
Sbjct: 354 NDDLL-VSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYE 412
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
MLE N+ P ++TFV VLSAC H G V EG++YF M D G EP +HY+CM++L GR+
Sbjct: 413 NMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRS 472
Query: 485 GKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLA 527
G + A LI +M P S+ AA ++L P NAVPY+ML+
Sbjct: 473 GHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLS 532
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA G+W++VA+IR LM+ + V+K +SWIE+ ++H FVA+D +HP K IH L
Sbjct: 533 NMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLN 592
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG-EPILVMKNL 634
+ RK+++AG+ P +K + + +HSEKLA+A+GL+ +G PI ++KN+
Sbjct: 593 RLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNI 652
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R C DCH +KF+S I R + +RD+ RFH F +G+CSC DYW
Sbjct: 653 RTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 164/373 (43%), Gaps = 43/373 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C DL GK +H + + + ++ N LY++CG + A F++
Sbjct: 157 THVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRM 216
Query: 61 QHANVFSFNVLLAAYARQLR-----------------------------------IASAR 85
NV ++N++++ Y + + I AR
Sbjct: 217 VIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEAR 276
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
++F +I + D V + +I A G E AL LF +M + DG+T+S ++++ +
Sbjct: 277 KVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLA 336
Query: 146 CLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
L + +H A G + V+++L+ Y + G +A +F M + ++ VSWNSM+
Sbjct: 337 SLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTM-QTRNVVSWNSMI 395
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI-KSGF 262
Y + + LEAL L++ M+ L D T +L+A + G ++ + + G
Sbjct: 396 GGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGL 455
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVLWNTMISGYSQKEE--YSDQAL 319
+ +++L+ + SG M + + + Q P+ ++W T++S K + + + A
Sbjct: 456 EPTPDHYACMVNLFGR-SGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAA 514
Query: 320 GCFKKLNRVGYHP 332
C +LN P
Sbjct: 515 RCLIELNPFNAVP 527
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 306 SGYSQKEEYSDQALGCFK-----KLNRVGYH-------PDDCSFVCVISACSNLSPSLGK 353
+G + E Y+ AL CF+ + R+ H P+D + + NL G+
Sbjct: 17 NGPASHECYTRLALECFRASDVDQAKRLKSHMHLHLFKPND---TFIHNRLLNLYAKSGE 73
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
HA + E+ NA++++Y+K G +ED R +FD MP ++VS N++I+G+A +
Sbjct: 74 ISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGN 133
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G AL +F M + + PT T VSVL+AC + G++ + + G
Sbjct: 134 GRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ---IHGRIIICNLGGNV 190
Query: 474 YSC--MIDLLGRAGKLTDAERLIEAM 497
+ C + DL R G++ A RL + M
Sbjct: 191 FVCNALTDLYARCGEIDQARRLFDRM 216
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/778 (32%), Positives = 396/778 (50%), Gaps = 104/778 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK----CGCLSAAHHAF 57
+ ++L+ C + G+++HA +K + SAYL N+ + Y + G L A F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 58 NQTQHA--NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
++ A NVF++N LL+ +A+ R+A AR +F ++P+ D VS+ ++ G A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 116 LSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
+ DM F FTL+ +++ A + + +++H + G V NS+L
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 174 YSRNGFLDEAKRVFYEM------------------GEI------------KDEVSWNSMV 203
Y + G + A VF M G + + VSWN+M+
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268
Query: 204 VAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
Y Q+ +AL+LF M+ + D +T+ S+L+A +L ++ G Q HA+++++
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 263 HQNSHIGSGLIDLYAKCS--------------------------------GDMRDCMKVF 290
NS + + LI YAK GDM ++F
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-P 349
+ D+V W MI GY Q +D+A+ F+ + G P+ + V+S C++L+
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGR-NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 447
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIA 408
GKQIH I+ + SV+NA++ MY++ G+ ARR+FD++ T++ SMI
Sbjct: 448 DYGKQIHCRAIR-SLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
AQHG G EA+ LFE ML + P IT+V VLSAC+H G V EG++Y+ +K+
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANH 511
PE HY+CM+DLL RAG ++A+ I MP P +IA AA
Sbjct: 567 PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L ++P+N+ Y +AN+Y+A G+W + A I + +++ V+K+ GFSW ++ ++HVF A
Sbjct: 627 LLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
+D HP ++ M ++K AG+VPD KE+ L HSEKLA+AFGL
Sbjct: 687 DDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGL 746
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ST + VMKNLR+C DCH AIK IS + REI VRD RFH F+DG CSC DYW
Sbjct: 747 ISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/642 (37%), Positives = 366/642 (57%), Gaps = 44/642 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK---RF 127
++ Y + R+ AR++FD++P+ D + +NT+IS Y ++ +F+D+ + R
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 128 DTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
DT TL ++ A + L L Q+H LA G + V ++ YS+ G + A
Sbjct: 220 DTT--TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F E D V++N+M+ Y + E +L LF+E++ L TL S++ L
Sbjct: 278 LFREFRR-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLM 336
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ H + +KS F ++ + + L +Y+K + ++ K+F+E P+ L WN MI
Sbjct: 337 LIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLN-EIESARKLFDESPEKSLPSWNAMI 392
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SGY+Q ++ A+ F+++ + P+ + C++SAC+ L SLGK +H L +
Sbjct: 393 SGYTQNG-LTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ I V+ AL+ MY+KCG++ +ARRLFD MP+ N V+ N+MI+GY HG G EAL +F
Sbjct: 452 ESS-IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFS 510
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
ML + I PT +TF+ VL AC+H G V EG + F+ M +GFEP +HY+C++D+LGRA
Sbjct: 511 EMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRA 570
Query: 485 GKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLA 527
G L A + IEAMP PG ++A + +L+P N +V+L+
Sbjct: 571 GHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NI++A + + AT+R+ + R + K PG++ IE+ + HVF + D SHP +K IH LE
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLE 690
Query: 588 EMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ KM++AGY P+ E L HSE+LA+AFGL++T G I ++KNLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+C DCH A K IS I R I VRD RFH FKDG CSCGDYW
Sbjct: 751 VCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 256/549 (46%), Gaps = 54/549 (9%)
Query: 45 SKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLIS 104
S G + A F Q +VF FNVL+ ++ S+ +F + + + N+
Sbjct: 63 SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTY 122
Query: 105 AYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA 164
A+A SA S F+D R C+I H AI G D
Sbjct: 123 AFAI-----SAASGFRDDRAG--------------------CVI---HGQAIVDGCDSEL 154
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
+ ++++ Y + +++A++VF M E KD + WN+M+ Y ++ +E++Q+F+++++
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 225 LQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
LD TL IL A L++L G+Q H+ K+G + + ++ +G I LY+KC G +
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC-GKI 272
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ +F E +PD+V +N MI GY+ E ++ +L FK+L G + V ++
Sbjct: 273 KMASTLFREFRRPDIVAYNAMIHGYTSNGE-TELSLSLFKELMLSGAKLKSSTLVSLVPV 331
Query: 344 CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+L L IH ++K S+ SV+ AL +YSK +E AR+LFD PE + S
Sbjct: 332 SGHL--MLIYAIHGYSLKSNFLSH-TSVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI+GY Q+G+ +A+ LF M + P +T +LSACA G ++ G+ +++
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPY 523
FE + +I + + G + +A RL + MP N V +
Sbjct: 449 T-DFESSIYVSTALIGMYAKCGSIAEARRLFDFMP------------------KKNEVTW 489
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
+ + Y G +E TI M + G+ P + H + ++G IH
Sbjct: 490 NTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 584 NYLEEMSRK 592
Y E S K
Sbjct: 550 RYGFEPSVK 558
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 186/397 (46%), Gaps = 36/397 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L ++L G +H+L K Y+ FI LYSKCG + A F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF--- 279
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ R +PD+V+YN +I Y G+TE +LSLFK
Sbjct: 280 ----------------REFR------------RPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
++ TL L+ S +L LI +H ++ F + SV+ +L T YS+ +
Sbjct: 312 ELMLSGAKLKSSTLVSLVPV-SGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEI 370
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+ A+++F E E K SWN+M+ Y Q+ +A+ LF+EM + + + T+ IL+A
Sbjct: 371 ESARKLFDESPE-KSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSA 429
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L L G H + + F + ++ + LI +YAKC G + + ++F+ +P+ + V
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC-GSIAEARRLFDFMPKKNEVT 488
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WNTMISGY + +AL F ++ G P +F+CV+ ACS+ G +I
Sbjct: 489 WNTMISGYGL-HGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
I + +V + + G+L+ A + + MP
Sbjct: 548 IHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMP 584
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 20/269 (7%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD------CMKVFEEIPQPDLVLWNTMI 305
Q HA ++ GF + I L K + + D +F + +PD+ L+N ++
Sbjct: 38 QTHAQIVLHGFRND-------ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 306 SGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIE 363
G+S E +L F L + P+ ++ ISA S G IH I ++
Sbjct: 91 RGFSVNES-PHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAI-VD 148
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + + + +V MY K +EDAR++FDRMPE +T+ N+MI+GY ++ + +E++++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 424 EWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
++ E+ T + +L A A ++ G + S+ G + I L
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT-GCYSHDYVLTGFISLYS 267
Query: 483 RAGKLTDAERLIEAMPFNPGSIALKAANH 511
+ GK+ A L P +A A H
Sbjct: 268 KCGKIKMASTLFREFR-RPDIVAYNAMIH 295
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 83/219 (37%), Gaps = 44/219 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H L S Y+S I +Y+KCG
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS----------- 470
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
IA AR+LFD +P+ + V++NT+IS Y G + AL++F
Sbjct: 471 --------------------IAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFS 510
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ--------LHCLAIYCGFDHYASVNNSLLT 172
+M T ++ A S+ L+K+ +H HYA V + L
Sbjct: 511 EMLNSGIAPTPVTFLCVLYACSHA-GLVKEGDEIFNSMIHRYGFEPSVKHYACVVDIL-- 567
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
R G L A + M W +++ A H++
Sbjct: 568 --GRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKD 604
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 359/658 (54%), Gaps = 43/658 (6%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A Q +++ L+ YA+ A+QLF + DLV+++ +I+A G E A
Sbjct: 355 ALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEA 414
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
LSLF++M+ ++ + TL ++ A ++ L L K +HC + D S +L++
Sbjct: 415 LSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSM 474
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ GF A F M +D V+WNS++ Y Q + A+ +F ++ + D T
Sbjct: 475 YAKCGFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ ++ A L DL G H ++K GF + H+ + LID+YAKC G + +F +
Sbjct: 534 MVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC-GSLPSAEFLFNKT 592
Query: 294 P-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D V WN +I+ Y Q ++ +A+ F ++ +HP+ +FV V+ A + L+
Sbjct: 593 DFTKDEVTWNVIIAAYMQNG-HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 651
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G HA I++ SN + V N+L+ MY+KCG L + +LF+ M +TVS N+M++GYA
Sbjct: 652 GMAFHACIIQMGFLSNTL-VGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYA 710
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG G A+ LF M E+ + +++FVSVLSAC H G V EG+K F M D + +P+
Sbjct: 711 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDL 770
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP--------------------GSIALKAANH 511
EHY+CM+DLLGRAG + I+ MP P G +AL +H
Sbjct: 771 EHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVAL---DH 827
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
++LEP N +V+L++IYA SG+W + R M D G++K PG SW+E+K ++H F
Sbjct: 828 LVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRV 887
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGL 619
D SHP ++ +H + KM++ GYVP DKE L HSE+LA+ F L
Sbjct: 888 GDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFAL 947
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+T G I ++KNLR+C DCH KFIS I R I VRD RFH F+DG CSC DYW
Sbjct: 948 LNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 239/508 (47%), Gaps = 41/508 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G +L G H + + ++ + +YSK G L
Sbjct: 131 TFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLK--------- 181
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR++FD++P+ D+V++N +I+ + D A+ F+
Sbjct: 182 ----------------------RAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFR 219
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + +L L +N+ L + +H F ++V+N L+ YS+ G
Sbjct: 220 SMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCG 277
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+RVF +M + +D+VSW +M+ Y + +E L+LF +M + ++ + S
Sbjct: 278 DVDVARRVFDQMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A DL G + H ++ + + + L+ +YAKC G+ ++F + DL
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC-GETEKAKQLFWGLQGRDL 395
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V W+ +I+ Q Y ++AL F+++ P+ + + ++ AC++LS LGK IH
Sbjct: 396 VAWSAIIAALVQT-GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHC 454
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
T+K ++ S+ +S ALV+MY+KCG A F+RM + V+ NS+I GYAQ G
Sbjct: 455 FTVKADMDSD-LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ +F + + I P T V V+ ACA + +G ++ + GFE + + +
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNAL 572
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIA 505
ID+ + G L AE L F +
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 179/320 (55%), Gaps = 8/320 (2%)
Query: 138 ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
+ +S +L + Q+H I GF H+ S+ + L+ YS D A+ VF + +
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF-DSTPNPSRI 95
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
WNSM+ AY + ++ EAL+++ MV L D YT +L A T +L G+ FH +
Sbjct: 96 LWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEI 155
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+ G ++ IG+GL+D+Y+K GD++ +VF+++P+ D+V WN MI+G SQ E+ +
Sbjct: 156 DRRGLERDVFIGAGLVDMYSKM-GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPC-E 213
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F+ + VG P S + + LS L + IH + + S +V+N L+
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS---AVSNGLI 270
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+YSKCG+++ ARR+FD+M + + VS +M+AGYA +G +E L LF+ M N+ +
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330
Query: 437 TFVSVLSACAHTGKVAEGQK 456
+ VS A A T + +G++
Sbjct: 331 SAVSAFLAAAETIDLEKGKE 350
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 192/386 (49%), Gaps = 11/386 (2%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR +FD P P + +N++I AY AL ++ M EK + D +T + ++ A +
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 144 NLCLIKQL--HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L + + H G + + L+ YS+ G L A+ VF +M + +D V+WN+
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNA 200
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Q + EA+ F+ M + + +L ++ L ++ H ++ +
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRD 260
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
F +S + +GLIDLY+KC GD+ +VF+++ D V W TM++GY+ + + L
Sbjct: 261 F--SSAVSNGLIDLYSKC-GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV-EVLEL 316
Query: 322 FKKLNRVGYHPDDCSFVCV-ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F K+ + S V ++A + GK+IH ++ I S+ I V L+ MY+
Sbjct: 317 FDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD-ILVATPLMVMYA 375
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG E A++LF + + V+ +++IA Q G EAL LF+ M + P +T +S
Sbjct: 376 KCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMS 435
Query: 441 VLSACAHTGKVAEGQKY--FSMMKDM 464
+L ACA + G+ F++ DM
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADM 461
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 213/472 (45%), Gaps = 46/472 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GKS+H +K + + +Y+KCG +AA FN+
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ + +N+LI+ YA GD +A+ +F
Sbjct: 492 SSRDIVT-------------------------------WNSLINGYAQIGDPYNAIDMFY 520
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R + D T+ G++ A + N+L +H L + GF+ V N+L+ Y++ G
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+ +F + KDEV+WN ++ AY Q+ EA+ F +M + T S+L
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L G+ FHA +I+ GF N+ +G+ LID+YAKC G + K+F E+ D
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKC-GQLXYSEKLFNEMDHKDT 699
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V WN M+SGY+ + D+A+ F + D SFV V+SAC + L K H
Sbjct: 700 VSWNAMLSGYAV-HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFH 758
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
+++ K I+ + + +V + + G ++ MP E + +++ H
Sbjct: 759 SMSDKYHIKPD-LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH-- 815
Query: 416 GMEALRLFEWMLE--TNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKDM 464
++L E L+ + P N VLS+ A +G+ A+ K S M D+
Sbjct: 816 --SNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 865
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 260/769 (33%), Positives = 399/769 (51%), Gaps = 112/769 (14%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+++HA + + + N + +Y K L A F + + + + L+ AY
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 78 QLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ R++F+ P D V YN +I+ YA GD SAL LF+ MR F D FT +
Sbjct: 92 LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151
Query: 136 GLITA---SSNNLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCYSRNG--------FLDEA 183
+++A N Q+HC + G +S V N+LL+ Y + + A
Sbjct: 152 SVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSA 211
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQH------REGLEA---------------------- 215
+++F EM + +DE++W +M+ Y ++ RE EA
Sbjct: 212 RKLFDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 216 ---LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH----I 268
L L ++M L + D T +I++A ++ G Q HA+++K+ + N +
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSV 330
Query: 269 GSGLIDLYAKC------------------------------SGDMRDCMKVFEEIPQPDL 298
+ LI LY K +G M + FEE+P +L
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ MISG +Q + D+ L FK++ G+ P D +F ++ACS L G+Q+HA
Sbjct: 391 LTLTVMISGLAQNG-FGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ + S+ +SV NA+++MY+KCG +E A +F MP + VS NSMIA QHG G+
Sbjct: 450 QLVHLGYESS-LSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGV 508
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A+ LF+ ML+ + P ITF++VL+AC+H G V +G+ YF+ M + +G P +HY+ M
Sbjct: 509 KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARM 568
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DL RAG + A +I++MP PG+ + ++AA +L P N
Sbjct: 569 VDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+NIYA G+W EVA +R+LMRD+ V+K+P SWIEV+ ++HVF+ +D HP +
Sbjct: 629 GTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVL 688
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
++ YLE++ +MK+ GY+PD KE L HSEKLAV FG++ G +
Sbjct: 689 SVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATV 748
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KN+RICGDCHNA KF+S +A REI VRD RFH FK+G CSC DYW
Sbjct: 749 RVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 32/326 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVP---FSAYLSNHFILLYSKCGCLSAAHHA 56
T+ ++ C GK +HA LKN L P F +SN I LY K + A
Sbjct: 291 TYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKI 350
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F N+ ++N +L+ Y R+ A+ F+++P +L++ +IS A G + L
Sbjct: 351 FYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGL 410
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
LFK MR F+ F +G +TA S L +QLH ++ G++ SV N++++ Y
Sbjct: 411 KLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMY 470
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G ++ A+ VF M + D VSWNSM+ A GQH G++A++LF +M+ + D T
Sbjct: 471 AKCGVVEAAESVFVTMPSV-DLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITF 529
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGS-----------GLIDLYAKCSGD 282
++LTA + HA L++ G H NS + S ++DL+ + +G
Sbjct: 530 LTVLTACS-----------HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCR-AGM 577
Query: 283 MRDCMKVFEEIP-QPDLVLWNTMISG 307
V + +P +P +W +++G
Sbjct: 578 FSYARIVIDSMPSKPGAPVWEALLAG 603
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/778 (32%), Positives = 397/778 (51%), Gaps = 104/778 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK----CGCLSAAHHAF 57
+ ++L+ C + G+++HA +K + SAYL N+ + Y + G L A F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 58 NQTQHA--NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
++ A NVF++N LL+ +A+ R+A AR +F ++P+ D VS+ ++ G A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 116 LSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
+ DM F FTL+ +++ A + + +++H + G V NS+L
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 174 YSRNGFLDEAKRVFYEM------------------GEI------------KDEVSWNSMV 203
Y + G + A VF M G + + VSWN+M+
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268
Query: 204 VAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
Y Q+ +AL+LF M+ + D +T+ S+L+A +L ++ G Q HA+++++
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 263 HQNSHIGSGLIDLYAKCS--------------------------------GDMRDCMKVF 290
NS + + LI YAK GDM ++F
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-P 349
+ D+V W MI GY Q +D+A+ F+ + G P+ + V+S C++L+
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGR-NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 447
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIA 408
GKQIH I+ + + SV+NA++ MY++ G+ ARR+FD++ T++ SMI
Sbjct: 448 DYGKQIHCRAIRSLLEQSS-SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
AQHG G EA+ LFE ML + P IT+V VLSAC+H G V EG++Y+ +K+
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANH 511
PE HY+CM+DLL RAG ++A+ I MP P +IA AA
Sbjct: 567 PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L ++P+N+ Y +AN+Y+A G+W + A I + +++ V+K+ GFSW ++ ++HVF A
Sbjct: 627 LLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
+D HP ++ M ++K AG+VPD KE+ L HSEKLA+AFGL
Sbjct: 687 DDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGL 746
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ST + VMKNLR+C DCH AIK IS + REI VRD RFH F+DG CSC DYW
Sbjct: 747 ISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/598 (40%), Positives = 338/598 (56%), Gaps = 65/598 (10%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA----------------- 183
S N+L L KQLH L I G ++N LL YS+ G LD A
Sbjct: 64 SENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNI 123
Query: 184 --------------KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+++F EM E ++ +WN+MV Q E L LF M L
Sbjct: 124 LINGYFRSGDWVTARKMFDEMPE-RNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLP 182
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D + L S+L L LV G Q H ++ K GF N + S L +Y KC G + + ++
Sbjct: 183 DEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC-GSLGEGERL 241
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
+P ++V WNT+I+G +Q Y ++ L + + G+ PD +FV VIS+CS L+
Sbjct: 242 IRAMPSQNVVAWNTLIAGRAQNG-YPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELAT 300
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G+QIHA IK S +SV ++L++MYS+CG LE + ++F + V +SMIA
Sbjct: 301 LGQGQQIHAEVIKAGA-SLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIA 359
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Y HG G+EA+ LF M + + ++TF+S+L AC+H G +G K+F +M + +G +
Sbjct: 360 AYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVK 419
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANH 511
P EHY+CM+DLLGR G + +AE LI +MP I K +
Sbjct: 420 PRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEE 479
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
+L+P + VPYV+L+NI+A+ +W++V+ +R+ MRDR ++K+PG SW+EVK Q+H F
Sbjct: 480 VFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCM 539
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
D SHP EI +YL E++ +MK+ GYVPD KE LVHHSEKLA+AF L
Sbjct: 540 GDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFAL 599
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L T G PI V+KNLR+C DCH AIK+IS I+ REI VRD+ RFH FK+GRCSCGDYW
Sbjct: 600 LYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE--------------- 386
S S S SLGKQ+H+L I S++ ++N L+ +YSKCG L+
Sbjct: 61 SCISENSLSLGKQLHSLIITSGCSSDKF-ISNHLLNLYSKCGQLDTAITLFGVMPRKNIM 119
Query: 387 ----------------DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
AR++FD MPE N + N+M+AG Q E L LF M E
Sbjct: 120 SCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELG 179
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P SVL CA + G++ ++ GFE S + + + G L +
Sbjct: 180 FLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKC-GFEFNLVVVSSLAHMYMKCGSLGEG 238
Query: 491 ERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
ERLI AMP S + A N + N P +L
Sbjct: 239 ERLIRAMP----SQNVVAWNTLIAGRAQNGYPEEVL 270
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ +C L G+ +HA +K + + I +YS+CGCL + F +
Sbjct: 287 TFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLEC 346
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
++ +V ++ ++AAY R A LF+Q+ Q L V++ +L+ A + CG E +
Sbjct: 347 ENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGI 406
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M EK + +HY + + L R
Sbjct: 407 KFFDLMVEK----------------------------YGVKPRLEHYTCMVDLL----GR 434
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
G ++EA+ + M D ++W +++ A H++ A ++ +E+ L
Sbjct: 435 YGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRL 483
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/658 (37%), Positives = 372/658 (56%), Gaps = 39/658 (5%)
Query: 52 AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
A H + H +V N L+A Y + R+ ARQ+FD +P + VS N L+S YA G
Sbjct: 32 AIHAQMIRAAHFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGR 91
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNS 169
AL+L K F + + LS ++A+++ + + +Q H A+ G + V N+
Sbjct: 92 HSDALALLK---AADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNA 148
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+L Y + +++A +VF + D ++NSM+ + E ++++ + MV
Sbjct: 149 VLHMYCQCAHVEDAVKVFENVSGF-DIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQW 207
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D + ++L S ++L+ G Q HA +K QN ++GS L+D+Y KC RD
Sbjct: 208 DHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDC-ARDAHSA 266
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE +P+ ++V W +++ Y+Q E + D AL F L G P++ ++ +++C+ L+
Sbjct: 267 FEVLPEKNVVSWTAVMTAYTQNERFED-ALQLFLDLEIEGVRPNEFTYAVALNSCAGLAA 325
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G + A +K +SV NAL+ MYSK G++ DA R+F MP + VS NS+I
Sbjct: 326 LKNGNALSASAMKTG-HWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVII 384
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GYA HG+ EA+ +F ML I P+ +TFV VL ACA G V EG Y ++M G +
Sbjct: 385 GYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIK 444
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANH 511
P EHY+CM+ LL RAG+L +AE+ I + +A K+ A
Sbjct: 445 PGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQ 504
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
LQL+P++ YV+L+N+YA + +W+ V +R+LMR+RGV+K+PG SWI+V ++HVF +
Sbjct: 505 ILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTS 564
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
ED +H I +I L+E+ ++K GYVP+ KE+ L++HSEK+A+AFGL
Sbjct: 565 EDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGL 624
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + GE I +MKNLRIC DCH AIK IS + R+I VRDT RFHC DG CSC DYW
Sbjct: 625 IHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ VL C ++L+ G +HA LK + + Y+ + + +Y KC C AH AF
Sbjct: 211 SYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVL 270
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
NV S+ ++ AY + R A QLF + +P+ +Y +++ A
Sbjct: 271 PEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAG-------- 322
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L+ L ++ + +K H A+ SV N+L+ YS+
Sbjct: 323 -----------------LAALKNGNALSASAMKTGHWGAL--------SVCNALMNMYSK 357
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G + +A RVF M +D VSWNS+++ Y H EA+ +F +M+ ++ T
Sbjct: 358 SGSIHDAWRVFLSM-PWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVG 416
Query: 237 ILTAFTSLEDLVGGLQF 253
+L A L + GL +
Sbjct: 417 VLLACAQLGLVDEGLYY 433
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/674 (37%), Positives = 369/674 (54%), Gaps = 43/674 (6%)
Query: 43 LYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
L S C + A H HA A++ LL Y++ + +A + F +
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETEN 427
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHC 153
+V +N ++ AY + + +F+ M+ + + FT ++ S L L +Q+H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHT 487
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
I GF V + L+ Y++ G L A R+ + E D VSW +M+ Y QH
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE-DDVVSWTAMIAGYVQHDMFS 546
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EALQLF+EM + D AS ++A + L G Q HA +GF + I + LI
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
LYA+C G +++ FE+I + + WN+++SG +Q Y ++AL F ++ R +
Sbjct: 607 SLYARC-GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSG-YFEEALQVFVRMLRTEAEVN 664
Query: 334 DCSF-VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
++ + +A S + G+QIH++ +K S R V+N+L+++Y+K G++ DA R F
Sbjct: 665 MFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER-EVSNSLISLYAKSGSISDAWREF 723
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+ M E N +S N+MI GY+QHG GMEALRLFE M I P ++TFV VLSAC+H G V
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------- 503
EG YF M + P+ EHY C++DLLGRAG+L A I+ MP +
Sbjct: 784 EGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSA 843
Query: 504 --------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
I +AA+H L+LEP ++ YV+++NIYA S +W R+LM+D GV+K+P
Sbjct: 844 CVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEP 903
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-----------KEK 604
G SWIEVK +H F A D HP+ +I+ Y+ ++R+ + GYV D ++
Sbjct: 904 GRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKD 963
Query: 605 RLVH-HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
+ H HSEKLA+AFGLLS PI VMKNLR+C DCHN IK++S I+ R I VRD +RF
Sbjct: 964 PITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRF 1023
Query: 664 HCFKDGRCSCGDYW 677
H F G CSC D+W
Sbjct: 1024 HHFDGGVCSCKDFW 1037
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 178/606 (29%), Positives = 297/606 (49%), Gaps = 51/606 (8%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ Y++ I SA+++F+ I D+V++ +IS + G E A+ LF DM
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 129 TDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS +++AS+ L +QLHCL I GF V N L+ YSR+ L A+R+
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M +D VS+NS++ Q AL+LF +M L D T+AS+L+A S+
Sbjct: 319 FSTMNS-RDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA 377
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G+Q H+H IK+G + + L+DLY+KC+ D+ K F ++VLWN M+
Sbjct: 378 LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA-DVETAHKFFLXTETENIVLWNVMLV 436
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q + SD + F+++ G P+ ++ ++ C++L LG+QIH IK +
Sbjct: 437 AYGQLDNLSD-SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQ 495
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + V + L+ MY+K G L A R+ R+PE + VS +MIAGY QH + EAL+LFE
Sbjct: 496 LN-VYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEE 554
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M I NI F S +SACA + +GQ+ + GF + + +I L R G
Sbjct: 555 MEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAA-GFGADLSINNALISLYARCG 613
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI-RR 544
++ +A E ++ N + + L + A SG +EE + R
Sbjct: 614 RIQEAYLAFE------------------KIGDKNNISWNSLVSGLAQSGYFEEALQVFVR 655
Query: 545 LMRDRGVQKKPGFSW------------IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
++R + F++ I+ +Q+H V + G + +E+ N L + K
Sbjct: 656 MLRTEA--EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTG-YDSEREVSNSLISLYAK 712
Query: 593 MKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNAIKF 646
+G + D + SE+ +++ + T Y E + + + +++CG N + F
Sbjct: 713 ---SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTF 769
Query: 647 ISAIAG 652
+ ++
Sbjct: 770 VGVLSA 775
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 245/439 (55%), Gaps = 8/439 (1%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H+ + N L+A Y+R ++ SA ++F + D VSYN+LIS G ++ AL LF
Sbjct: 293 HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK 352
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D T++ L++A ++ L K QLH AI G + SLL YS+
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A + F+ E ++ V WN M+VAYGQ ++ ++F++M + + +T SIL
Sbjct: 413 VETAHK-FFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
TSL L G Q H H+IK+GF N ++ S LID+YAK G + +++ +P+ D+V
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAK-YGQLALALRILRRLPEDDVV 530
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W MI+GY Q + +S +AL F+++ G D+ F ISAC+ + G+QIHA
Sbjct: 531 SWTAMIAGYVQHDMFS-EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ ++ +S+NNAL+++Y++CG +++A F+++ + N +S NS+++G AQ G E
Sbjct: 590 SYAAGFGAD-LSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL++F ML T T+ S +SA A + +GQ+ SM+ G++ E E + +I
Sbjct: 649 ALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT-GYDSEREVSNSLI 707
Query: 479 DLLGRAGKLTDAERLIEAM 497
L ++G ++DA R M
Sbjct: 708 SLYAKSGSISDAWREFNDM 726
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 9/432 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y R A ++FD+ + S+N +I + LF+ M + +
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158
Query: 131 GFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
G+T +G++ A +KQ+H Y GFD V N L+ YS+NG+++ AK+VF
Sbjct: 159 GYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF 218
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ +KD V+W +M+ Q+ EA+ LF +M + ++ Y L+S+L+A T ++
Sbjct: 219 NCIC-MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q H +IK GFH +++ +GL+ LY++ S + ++F + D V +N++ISG
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSR-SRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS 366
Q + +SD+AL F K+ R PD + ++SAC+++ G Q+H+ IK + +
Sbjct: 337 LVQ-QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ I + +L+ +YSKC ++E A + F N V N M+ Y Q ++ +F M
Sbjct: 396 D-IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P T+ S+L C G + G++ + + GF+ S +ID+ + G+
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQ 513
Query: 487 LTDAERLIEAMP 498
L A R++ +P
Sbjct: 514 LALALRILRRLP 525
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 159/336 (47%), Gaps = 20/336 (5%)
Query: 132 FTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+ L G +T+ S L +LHC GFD + +SL+ Y R+G A +VF E
Sbjct: 63 WLLEGCLTSGS--LFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG- 250
+ SWN M+ + + + LF+ M++ + + YT A +L A VGG
Sbjct: 121 N-RSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA------CVGGD 173
Query: 251 ------LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
Q H+ GF + + + LIDLY+K +G + KVF I D+V W M
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK-NGYIESAKKVFNCICMKDIVTWVAM 232
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISG SQ ++A+ F ++ P V+SA + + LG+Q+H L IK
Sbjct: 233 ISGLSQNG-LEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S V N LVA+YS+ L A R+F M + VS NS+I+G Q G AL LF
Sbjct: 292 FHS-ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
M + P IT S+LSACA G + +G + S
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
++ G+ +H++ LK +SN I LY+K G +S A FN NV S+N ++
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMIT 739
Query: 74 AYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
Y++ A +LF+++ P+ V++ ++SA + G + L F+ M
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM------- 792
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
F + L+ S + +C++ L R G LD A E
Sbjct: 793 --FKIHDLVPKSEHYVCVVDLL-----------------------GRAGQLDRAMEYIKE 827
Query: 190 MGEIKDEVSWNSMVVAYGQHR 210
M D + W +++ A H+
Sbjct: 828 MPIPADAMIWRTLLSACVIHK 848
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/723 (35%), Positives = 386/723 (53%), Gaps = 87/723 (12%)
Query: 40 FILLYSKCGCLSA-----AHHAFNQTQ--HANVFSFNVLLAAYARQLRIASARQLFDQIP 92
F ++ CG +S+ + HA ++ +NVF N L+A Y+R ++ AR++FD++P
Sbjct: 130 FPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP 189
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLIT--ASSNNLCLIK 149
D+VS+N++I +YA G + AL +F M E F D TL ++ AS L K
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGK 249
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
Q H A+ V N L+ Y++ G +DEA VF M +KD VSWN+MV Y Q
Sbjct: 250 QFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNM-PVKDVVSWNAMVAGYSQI 308
Query: 210 REGLEALQLFQEMVSLQLGLDMYT-----------------------------------L 234
+A++LF++M ++ +D+ T L
Sbjct: 309 GRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIK-------SGFHQNSHIGSGLIDLYAKCSG-DMRDC 286
S+L+ S+ L+ G + H + IK +G + + + LID+YAKC D+
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARA 428
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISAC 344
M + D+V W MI GYSQ + +++AL ++ P+ + C + AC
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGD-ANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
++L+ S+GKQIHA ++ + + + V+N L+ MY+KCG++ DAR +FD M E N V+
Sbjct: 488 ASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTW 547
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
S++ GY HG G EAL +FE M +T + VL AC+H+G + +G +YF+ MK
Sbjct: 548 TSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK- 507
FG P EHY+C++DLLGRAG+L A RLIE MP P G + L
Sbjct: 608 DFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGE 667
Query: 508 -AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA +L +N Y +L+N+YA +G+W++V IR LMR +G++K+PG SW+E K
Sbjct: 668 YAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGT 727
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLA 614
F D +HP KEI+ L + +++K GYVP +K+ L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+A+G+L+T G I + KNLR+CGDCH A ++S I EI +RD+ RFH FK+G CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCK 847
Query: 675 DYW 677
YW
Sbjct: 848 GYW 850
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 211/484 (43%), Gaps = 80/484 (16%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WNS++ +YG + + L F M SL D YT + A + + G HA
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+GF N +G+ L+ +Y++C G + D KVF+E+P D+V WN++I Y+ K A
Sbjct: 155 VTGFMSNVFVGNALVAMYSRC-GSLSDARKVFDEMPVWDVVSWNSIIESYA-KLGKPKMA 212
Query: 319 LGCFKKL-NRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN---- 372
L F K+ N G+ PDD + V V+ C+++ + SLGKQ H + E+ N N
Sbjct: 213 LEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVD 272
Query: 373 --------------------------NALVAMYSKCGNLEDARRLFDRMPEH----NTVS 402
NA+VA YS+ G EDA RLF++M E + V+
Sbjct: 273 MYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVT 332
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY----- 457
++ I+GYAQ G+G EAL + ML + I P +T +SVLS CA G + G++
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 458 -FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLE 516
+ M G E + +ID+ + K+ A + ++ L +
Sbjct: 393 KYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDS----------------LSPK 436
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP-------------GFSWIEVK 563
+ V + ++ Y+ G + + M + Q +P + + +
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHS--EKLAVAFGLLS 621
KQ+H + + + + + N L +M K G + RLV + EK V + L
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIG-----DARLVFDNMMEKNEVTWTSLM 551
Query: 622 TSYG 625
T YG
Sbjct: 552 TGYG 555
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EH 398
I C +S K IH + I + +++ + L++ Y G L A L R P +
Sbjct: 35 IHKCKTISQV--KLIHQKLLSFGILT--LNLTSHLISTYISLGCLSHAVSLLRRFPPSDA 90
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
NS+I Y +G + L F M + P N TF V AC V G
Sbjct: 91 GVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSH 150
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
++ + + GF + ++ + R G L+DA ++ + MP
Sbjct: 151 ALSR-VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP 189
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/618 (40%), Positives = 356/618 (57%), Gaps = 57/618 (9%)
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL 154
++++ N LI++Y CGD +SA+ +F+DM+ K T L+ + +QL
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAF-AKKPGHFEYARQL--- 95
Query: 155 AIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
F+ N N +L C+ + + +A R F++ +KD SWN+M+ A Q
Sbjct: 96 -----FEKIPQPNTVSYNIMLACHWHHLGVHDA-RGFFDSMPLKDVASWNTMISALAQVG 149
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIG 269
EA +LF M + + +++++ + + DL ++ F+A ++S
Sbjct: 150 LMGEARRLFSAMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVI-----TW 200
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ +I Y K G + ++F+E+ LV WN MI+GY + D L F+ + G
Sbjct: 201 TAMITGYMKF-GRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAED-GLRLFRTMLETG 258
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ S V+ CSNLS LGKQ+H L K + S+ + +LV+MYSKCG+L+DA
Sbjct: 259 VKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSD-TTAGTSLVSMYSKCGDLKDA 317
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
LF ++P + V N+MI+GYAQHG G +ALRLF+ M + + P ITFV+VL AC H
Sbjct: 318 WELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHA 377
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG------ 502
G V G +YF+ M+ FG E + EHY+CM+DLLGRAGKL++A LI++MPF P
Sbjct: 378 GLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGT 437
Query: 503 -----------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
++A AA + L+L+P+ A YV LAN+YAA +W+ VA+IRR M+D V
Sbjct: 438 LLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNV 497
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
K PG+SWIE+ +H F + D HP + IH L+++ +KMK AGYVPD
Sbjct: 498 VKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGE 557
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
KE+ L+ HSEKLA+AFGLL G PI V KNLR+CGDCH+A K+IS I GREI VRD
Sbjct: 558 ELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRD 617
Query: 660 TYRFHCFKDGRCSCGDYW 677
T RFH FKDG CSC DYW
Sbjct: 618 TTRFHHFKDGFCSCRDYW 635
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 16/355 (4%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
K G A F + N S+N++LA + L + AR FD +P D+ S+NT+ISA
Sbjct: 85 KPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISA 144
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS 165
A G A LF M EK + +SG + L + C Y
Sbjct: 145 LAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGD----LDAAVECF--YAAPMRSVI 198
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+++T Y + G ++ A+R+F EM ++ V+WN+M+ Y ++ + L+LF+ M+
Sbjct: 199 TWTAMITGYMKFGRVELAERLFQEM-SMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLET 257
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +L S+L ++L L G Q H + K ++ G+ L+ +Y+KC GD++D
Sbjct: 258 GVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKC-GDLKD 316
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++F +IP+ D+V WN MISGY+Q +AL F ++ + G PD +FV V+ AC+
Sbjct: 317 AWELFIQIPRKDVVCWNAMISGYAQHGA-GKKALRLFDEMKKEGLKPDWITFVAVLLACN 375
Query: 346 NLS-PSLGKQIHALTIK---IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ LG Q + IE + + +V + + G L +A L MP
Sbjct: 376 HAGLVDLGVQYFNTMRRDFGIETKPEHYA---CMVDLLGRAGKLSEAVDLIKSMP 427
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 15/291 (5%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIA 82
A+ KN V +SA +S Y CG L AA F +V ++ ++ Y + R+
Sbjct: 160 AMPEKNCVSWSAMVSG-----YVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVE 214
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
A +LF ++ LV++N +I+ Y + G E L LF+ M E + +L+ ++ S
Sbjct: 215 LAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCS 274
Query: 143 N--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
N L L KQ+H L C + SL++ YS+ G L +A +F ++ KD V WN
Sbjct: 275 NLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR-KDVVCWN 333
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA--FTSLEDLVGGLQFHAHLI 258
+M+ Y QH G +AL+LF EM L D T ++L A L DL G+Q+ +
Sbjct: 334 AMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDL--GVQYFNTMR 391
Query: 259 KS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
+ G + ++DL + +G + + + + + +P +P ++ T++
Sbjct: 392 RDFGIETKPEHYACMVDLLGR-AGKLSEAVDLIKSMPFKPHPAIYGTLLGA 441
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG-LIDLYAKCSGDMRDCMKVFEEIPQ 295
+ ++F +L V H H + F+ N+ I S LI Y +C GD+ ++VFE++
Sbjct: 16 LTSSFVTLSKYVSS---HTH--QHEFNNNNVIASNKLIASYVRC-GDIDSAVRVFEDMKV 69
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKL---NRVGYH--------------------- 331
V WN++++ +++K + + A F+K+ N V Y+
Sbjct: 70 KSTVTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDS 129
Query: 332 ---PDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL--- 385
D S+ +ISA + + +G+ + E N +S +A+V+ Y CG+L
Sbjct: 130 MPLKDVASWNTMISALAQVG-LMGEARRLFSAMPE--KNCVSW-SAMVSGYVACGDLDAA 185
Query: 386 ----------------------------EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
E A RLF M V+ N+MIAGY ++G
Sbjct: 186 VECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAE 245
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ LRLF MLET + P ++ SVL C++ + G++ ++ + + +
Sbjct: 246 DGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKC-PLSSDTTAGTSL 304
Query: 478 IDLLGRAGKLTDAERLIEAMP 498
+ + + G L DA L +P
Sbjct: 305 VSMYSKCGDLKDAWELFIQIP 325
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C L GK +H L K + + +YSKCG L A F Q
Sbjct: 265 SLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQI 324
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V +N +++ YA+ A +LFD++ +PD +++ ++ A G + +
Sbjct: 325 PRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGV 384
Query: 117 SLFKDMRE 124
F MR
Sbjct: 385 QYFNTMRR 392
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/759 (35%), Positives = 405/759 (53%), Gaps = 102/759 (13%)
Query: 13 RDLVTGKSLHALYLKNLVPFSA-----------YLSNHFILLYSKCGCLSAA-------- 53
R+LVT L + Y +N P A ++ NH+ + C +
Sbjct: 163 RNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGV 222
Query: 54 --HHAFNQTQH-ANVFSFNVLLAAYARQLRIAS-ARQLFDQIPQPDLVSYNTLISAYADC 109
H ++T++ ++V NVL++ Y L A+ AR +FD I + +S+N++IS Y+
Sbjct: 223 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRR 282
Query: 110 GDTESALSLFKDMREKRFD-----TDGFTLSGLITASSNNLCLIKQLHCLAIYCGF-DHY 163
GD SA LF M+++ D F+ ++ +++H I G D+
Sbjct: 283 GDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKG---REVHAHVIRTGLNDNK 339
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ--- 220
++ N L+ Y+++G + +A VF M E KD VSWNS++ Q+ +A ++F
Sbjct: 340 VAIGNGLVNMYAKSGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAEMFSLMP 398
Query: 221 -----------------------------EMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+M+ GL T +IL+A +SL
Sbjct: 399 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 458
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYSQ 310
Q HA ++K ++ IG+ L+ Y KC G+M +C K+F + + D V WN+MISGY
Sbjct: 459 QIHALVLKYCLSDDTAIGNALLSCYGKC-GEMNECEKIFARMSETRDEVSWNSMISGYIH 517
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
E +A+ + + G D +F ++SAC++++ G ++HA I+ + S+ +
Sbjct: 518 NE-LLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESD-V 575
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V +ALV MYSKCG ++ A R F+ MP N S NSMI+GYA+HG G +AL+LF M+
Sbjct: 576 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 635
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
PP ++TFV VLSAC+H G V EG ++F M +++ P EH+SCM+DLLGRAGKL +
Sbjct: 636 GQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 695
Query: 490 AERLIEAMPFNPG-------------------SIALKAANHFLQLEPSNAVPYVMLANIY 530
I +MP P + +AA L+LEP NAV YV+LAN+Y
Sbjct: 696 VGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMY 755
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A+ KWE+VA R M++ V+K+ G SW+ +K +HVFVA D HP I++ L E++
Sbjct: 756 ASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELN 815
Query: 591 RKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
RKM+ AGY+P + L +HSEK+AVAF +L+ PI +MKNLR+CG
Sbjct: 816 RKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCG 874
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH+A +IS I GR+I +RD+ RFH F+DG+CSCGDYW
Sbjct: 875 DCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 240/522 (45%), Gaps = 76/522 (14%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+ LH +K + +LSN I +Y + G L +A F++ + N
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRN------------- 164
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
LV++ LIS Y G + A + F+DM F + +
Sbjct: 165 ------------------LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSA 206
Query: 138 ITA---SSNNLC-LIKQLHCLAIYCGFDHYASVNNSLLTCY-SRNGFLDEAKRVFYEMGE 192
+ A S + C L Q+H L + V N L++ Y S ++A+ VF +G
Sbjct: 207 LRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIG- 265
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED-LVGGL 251
I++ +SWNS++ Y + + + A LF M LG + + F+ LE+ G
Sbjct: 266 IRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFS-FKPNDAFSEFSVLEEGRRKGR 324
Query: 252 QFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
+ HAH+I++G + N IG+GL+++YAK SG + D VFE + + D V WN++ISG Q
Sbjct: 325 EVHAHVIRTGLNDNKVAIGNGLVNMYAK-SGAIADACSVFELMVEKDSVSWNSLISGLDQ 383
Query: 311 KE-------------EYS------------------DQALGCFKKLNRVGYHPDDCSFVC 339
E EY QA+ F ++ R G+ +F+
Sbjct: 384 NECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFIN 443
Query: 340 VISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE- 397
++SA S+LS + QIHAL +K + S+ ++ NAL++ Y KCG + + ++F RM E
Sbjct: 444 ILSAVSSLSLHEVSHQIHALVLKYCL-SDDTAIGNALLSCYGKCGEMNECEKIFARMSET 502
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS NSMI+GY + + +A+ L +M++ + TF ++LSACA + G +
Sbjct: 503 RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEV 562
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ E + S ++D+ + G++ A R E MP
Sbjct: 563 HACGIRAC-LESDVVVGSALVDMYSKCGRIDYASRFFELMPL 603
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G +HA ++ + + + + +YSKCG + A F
Sbjct: 542 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 601
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
NV+S+N +++ YAR A +LF ++ PD V++ ++SA + G E
Sbjct: 602 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF 661
Query: 117 SLFKDMRE 124
FK M E
Sbjct: 662 EHFKSMSE 669
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/628 (38%), Positives = 360/628 (57%), Gaps = 40/628 (6%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYA--DCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
R LF QI QP++ +NT+I DC D A+ + MR + F + FT ++ A
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFD--DAIEFYGLMRSEGFLPNNFTFPFVLKAC 122
Query: 142 SN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+ +L L ++H L + GFD V SL+ Y++ G+L++A +VF ++ + K+ VSW
Sbjct: 123 ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPD-KNVVSW 181
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
+++ Y + EA+ +F+ ++ + L D +T+ +L+A T L DL G H +++
Sbjct: 182 TAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIME 241
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
G +N +G+ L+D+YAKC G+M VF+ +P+ D+V W MI GY+ +A+
Sbjct: 242 MGMVRNVFVGTSLVDMYAKC-GNMEKARSVFDGMPEKDIVSWGAMIQGYALNG-LPKEAI 299
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ R PD + V V+SAC+ L LG+ + L + E N + + AL+ +
Sbjct: 300 DLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPV-LGTALIDL 358
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+KCG++ A +F M E + V N++I+G A +G + LF + + I P TF
Sbjct: 359 YAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTF 418
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +L C H G V EG++YF+ M F P EHY CM+DLLGRAG L +A +LI MP
Sbjct: 419 IGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMP 478
Query: 499 FNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
+I A A ++LEP N+ YV+L+NIY+A+ KW+E A
Sbjct: 479 MEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAK 538
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP- 600
+R M ++ +QK PG SWIEV +H F+ D HP+ ++I+ L+E+++KMK AGYVP
Sbjct: 539 VRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPT 598
Query: 601 -----------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+KE L HSEKLA+AFGL+S + I V+KNLR+CGDCH AIK IS+
Sbjct: 599 TDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISS 658
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I GREITVRD RFHCF++G CSC DYW
Sbjct: 659 ITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 192/370 (51%), Gaps = 6/370 (1%)
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ G + LI N+ +K LH + G H + N +L C + + +F+
Sbjct: 11 SKGLEIKKLILQGFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFH 70
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
++ + + WN+M+ + +A++ + M S + +T +L A L DL
Sbjct: 71 QIKQ-PNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQ 129
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G++ H ++K GF + + + L+ LYAKC G + D KVF++IP ++V W +ISGY
Sbjct: 130 LGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC-GYLEDAHKVFDDIPDKNVVSWTAIISGY 188
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
++ +A+ F++L + PD + V V+SAC+ L + G+ IH +++ + N
Sbjct: 189 IGVGKFR-EAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ V +LV MY+KCGN+E AR +FD MPE + VS +MI GYA +G+ EA+ LF M
Sbjct: 248 -VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQ 306
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
N+ P T V VLSACA G + G+ + S + D F + +IDL + G +
Sbjct: 307 RENVKPDCYTVVGVLSACARLGALELGE-WVSGLVDRNEFLYNPVLGTALIDLYAKCGSM 365
Query: 488 TDAERLIEAM 497
+ A + + M
Sbjct: 366 SRAWEVFKGM 375
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 186/417 (44%), Gaps = 38/417 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C DL G +H L +K ++ + LY+KCG L AH F+
Sbjct: 114 TFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDI 173
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV VS+ +IS Y G A+ +F+
Sbjct: 174 PDKNV-------------------------------VSWTAIISGYIGVGKFREAIDMFR 202
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ E D FT+ +++A + +L + +H + G V SL+ Y++ G
Sbjct: 203 RLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCG 262
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ VF M E KD VSW +M+ Y + EA+ LF +M + D YT+ +L
Sbjct: 263 NMEKARSVFDGMPE-KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVL 321
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G + ++ F N +G+ LIDLYAKC G M +VF+ + + D
Sbjct: 322 SACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC-GSMSRAWEVFKGMKEKDR 380
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V+WN +ISG + Y + G F ++ ++G PD +F+ ++ C++ G++
Sbjct: 381 VVWNAIISGLAMN-GYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFN 439
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+ + I +V + + G L++A +L MP E N + +++ H
Sbjct: 440 SMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 253/701 (36%), Positives = 392/701 (55%), Gaps = 61/701 (8%)
Query: 22 HALYLKNLVPFSAYLSNHFILLYSKCGCL------SAAHHAFNQTQHA-NVFSFNVLLAA 74
H + +VP +S+ +LL CG L A H + A +V N LL+
Sbjct: 211 HKFRMTGMVPDCFTMSS--VLL--ACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSM 266
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y + R+ AR++F ++ D V++NT+I YA G E+++ LF DM + F D ++
Sbjct: 267 YFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG-FVPDMLSI 325
Query: 135 SGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
+ I A S +L + K +H I GF+ N L+ Y++ G L A+ VF + +
Sbjct: 326 TSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF-DTTK 384
Query: 193 IKDEVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
KD V+WNS++ Y G ++EGLE+ + M+ ++ D T +L+ F+ L D+
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESFK----MMKMERKPDSVTFVLLLSIFSQLADINQ 440
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G H +IK GF IG+ L+D+YAKC G+M D +KVF + D++ WNT+I+
Sbjct: 441 GRGIHCDVIKFGFEAELIIGNSLLDVYAKC-GEMDDLLKVFSYMSAHDIISWNTVIA--- 496
Query: 310 QKEEYSDQALGCFKKLNRV---GYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIR 365
+ D +G F+ +N + G PD+ + + ++ CS L+ GK+IH K
Sbjct: 497 SSVHFDDCTVG-FQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFE 555
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
SN + + NAL+ MYSKCG+LE+ ++F M E + V+ ++I+ + +G G +AL+ F+
Sbjct: 556 SN-VPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + + P ++ F++ + AC+H+G V EG ++F MK + EP EHY+C++DLL R+G
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674
Query: 486 KLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLAN 528
L AE I +MP P + IA + + L+L + YV+++N
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA GKW++V T+R M+ +G++K+PG SWIE++K+++VF D S ++ + LE
Sbjct: 735 IYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEY 794
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ R M + GYV DK L HSE+LA+AFGLL+T G P+LVMKNLR+
Sbjct: 795 LVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRV 854
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH K+I+ I REI VRD RFH FKDG CSCGD+W
Sbjct: 855 CGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 247/513 (48%), Gaps = 44/513 (8%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
GC+ HA ++++ N L+ Y+R + + +AR +F+++ D VS+N+LIS Y
Sbjct: 140 GCI-VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYA 164
G E AL ++ R D FT+S ++ A +L +K+ +H + G
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLA-CGSLMAVKEGVAVHGVIEKIGIAGDV 257
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
+ N LL+ Y + L EA+RVF +M +KD V+WN+M+ Y Q +++LF +M+
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMID 316
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
DM ++ S + A DL G H +LI SGF ++ + LID+YAKC GD+
Sbjct: 317 -GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKC-GDLL 374
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+VF+ D V WN++I+GY+Q Y + L FK + ++ PD +FV ++S
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLINGYTQSGYYK-EGLESFKMM-KMERKPDSVTFVLLLSIF 432
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S L+ + G+ IH IK + I + N+L+ +Y+KCG ++D ++F M H+ +S
Sbjct: 433 SQLADINQGRGIHCDVIKFGFEAELI-IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISW 491
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYF 458
N++IA ++ M + P T + +L C+ GK G +
Sbjct: 492 NTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFK 551
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP----------------FNPG 502
S GFE + +I++ + G L + ++ + M + G
Sbjct: 552 S------GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 503 SIALKAANHFLQLEPSNAVP--YVMLANIYAAS 533
ALKA F +E S +P +A I+A S
Sbjct: 606 KKALKA---FQDMELSGVLPDSVAFIAFIFACS 635
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 162/599 (27%), Positives = 290/599 (48%), Gaps = 46/599 (7%)
Query: 71 LLAAYARQLRIASARQLFDQI-PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
L++ YA+ S+ +F I P ++ +N++I A G AL + +MREK+
Sbjct: 60 LISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQP 119
Query: 130 DGFTLSGLITASSNNLCLIKQLHCL----AIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D FT +I + + L L +L C+ A+ GF+ + N+L+ YSR LD A+
Sbjct: 120 DAFTFPSVINSCARILDL--ELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARY 177
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
VF EM +D VSWNS++ Y + +AL ++ + + D +T++S+L A SL
Sbjct: 178 VFEEMSN-RDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLM 236
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G+ H + K G + IG+GL+ +Y K +R+ +VF ++ D V WNTMI
Sbjct: 237 AVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFE-RLREARRVFSKMAVKDSVTWNTMI 295
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
GY+Q + + ++ F + G+ PD S I AC +GK +H I
Sbjct: 296 CGYAQLGRH-EASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF 353
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ ++ N L+ MY+KCG+L A+ +FD ++V+ NS+I GY Q G E L F+
Sbjct: 354 ECDTVAC-NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M++ P ++TFV +LS + + +G+ + ++K FGFE E + ++D+ +
Sbjct: 413 -MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK--FGFEAELIIGNSLLDVYAK 469
Query: 484 AGKLTDAERLIEAMPFN---PGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
G++ D ++ M + + + ++ HF V + M+ N G + A
Sbjct: 470 CGEMDDLLKVFSYMSAHDIISWNTVIASSVHF----DDCTVGFQMI-NEMRTEGLMPDEA 524
Query: 541 TIRRLMRDRGVQKKPGFSWIEVKKQ---MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
T+ ++ P S + V++Q +H ++ + G + I N L EM K G
Sbjct: 525 TVLGIL--------PMCSLLAVRRQGKEIHGYIFKSGFESNVP-IGNALIEMYSK---CG 572
Query: 598 YVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNAIKFISAI 650
+ + K + EK V + L +++G + + +++ + G +++ FI+ I
Sbjct: 573 SLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFI 631
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 27/417 (6%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+S+ N ++ +H L I G + L++ Y++ + VF + + W
Sbjct: 30 SSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLW 89
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ A + +AL + EM +L D +T S++ + + DL G H H ++
Sbjct: 90 NSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAME 149
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +IG+ LID+Y++ D+ + VFEE+ D V WN++ISGY + D AL
Sbjct: 150 MGFESDLYIGNALIDMYSRFV-DLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWED-AL 207
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ K G PD + V+ AC +L + G +H + KI I + I + N L++M
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI-IGNGLLSM 266
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K L +ARR+F +M ++V+ N+MI GYAQ G +++LF M++ +P ++
Sbjct: 267 YFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDM-LSI 325
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
S + AC +G + G K+ GFE + + +ID+ + G L A+ +
Sbjct: 326 TSTIRACGQSGDLQVG-KFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEV----- 379
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
F + ++V + L N Y SG ++E ++M+ +++KP
Sbjct: 380 -------------FDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK---MERKP 420
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 5/222 (2%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI- 293
+S+L +S ++ H+ +I SG + LI YA+ D + VF I
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVK-DPISSVSVFRSIS 81
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLG 352
P ++ LWN++I + ++ QALG + ++ PD +F VI++C+ L LG
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFT-QALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG 140
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+H +++ S+ + + NAL+ MYS+ +L++AR +F+ M ++VS NS+I+GY
Sbjct: 141 CIVHEHAMEMGFESD-LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS 199
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+G +AL ++ T + P T SVL AC V EG
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
GK +H K+ + + N I +YSKCG L F + +V ++ L++A+
Sbjct: 542 GKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGM 601
Query: 78 QLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMR 123
A + F + PD V++ I A + G + L F M+
Sbjct: 602 YGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMK 651
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/656 (36%), Positives = 372/656 (56%), Gaps = 36/656 (5%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
H F +TQ + S +++++ Y + A +F + P ++++ ++I + D
Sbjct: 28 HAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFS 87
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLL 171
AL+ F +MR D ++ + + +L + +H + G D N+L+
Sbjct: 88 RALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALM 147
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
YS+ +D ++VF E+ KD VS+N+++ Y Q +AL++ +EM + L D
Sbjct: 148 NMYSKLLGIDSVRKVF-ELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDA 206
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+TL+S+L F+ D++ G + H ++I+ G + +IGS L+D+YAK S + D +VF
Sbjct: 207 FTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK-SARIEDSERVFS 265
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ + D + WN++++GY Q Y ++AL F+++ P +F VI AC++L+
Sbjct: 266 HLYRRDSISWNSLVAGYVQNGRY-NEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLH 324
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LGKQ+H ++ N I + +ALV MYSKCGN++ AR++FDRM H+ VS ++I G+
Sbjct: 325 LGKQLHGYVLRGGFGRN-IFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGH 383
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A HG G EA+ LFE M + P + FV+VL+AC+H G V E YF+ M ++G E
Sbjct: 384 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 443
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHFL 513
EHY+ + DLLGRAGKL +A I M P GS+ A K A
Sbjct: 444 LEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 503
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
++ N YV++ N+YA++G+W+E+A +R +R +G++KKP SWIE+K + H FV+ D
Sbjct: 504 TIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGD 563
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
SHP + I+ +L+ + +M++ GYV D K + L HSE+LAVAFG+++
Sbjct: 564 RSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIIN 623
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T G I V KN+RIC DCH AIKFIS I REI VRD RFH F G CSCGDYW
Sbjct: 624 TEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 198/411 (48%), Gaps = 39/411 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK+C DL G+S+H ++ + Y N + +YSK + + F
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELM 166
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N ++A YA+ G E AL + +
Sbjct: 167 PRKDVVSYNTVIAGYAQS-------------------------------GMYEDALRMVR 195
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M D FTLS ++ S + ++ K++H I G D + +SL+ Y+++
Sbjct: 196 EMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 255
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++++RVF + +D +SWNS+V Y Q+ EAL+LF++MVS ++ +S++
Sbjct: 256 RIEDSERVFSHLYR-RDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVI 314
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L L G Q H ++++ GF +N I S L+D+Y+KC G+++ K+F+ + D
Sbjct: 315 PACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC-GNIQAARKIFDRMNLHDE 373
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V W +I G++ + +A+ F+++ R G P+ +FV V++ACS+ L +
Sbjct: 374 VSWTAIIMGHAL-HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 432
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
++T K+ + + A+ + + G LE+A +M T S+ S +
Sbjct: 433 SMT-KVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTL 482
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 381/644 (59%), Gaps = 46/644 (7%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ +A+ + + R++FD + + +V + LI+ YA G ++ A+ LF DM E F D
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NG-FLDEAKR 185
+TLS +++A + + L +QLH LA+ G + + V+ L+ Y++ NG L A+
Sbjct: 255 QYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNARE 314
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQH-REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
VF M + + ++W +++ Y Q + + + LF +M++ + + T +S+L A +L
Sbjct: 315 VFNRMPK-HNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANL 373
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
D G Q H H +KS + +G+ L+ +YA+ SG + + F+++ + ++V ++
Sbjct: 374 GDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAE-SGSIEEARHAFDQLYEKNMVSFSGN 432
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
+ G + Y D ++ R+ +F +ISA +++ + G+++HAL++K
Sbjct: 433 LDGDGRSNTYQDY------QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAG 486
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S+R ++ N+LV+MYS+CG L DA ++FD M +HN +S SMI+G A+HG AL LF
Sbjct: 487 FGSDR-AIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELF 545
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M+ + P ++T+++VLSAC+H G V EG+++F MM+ G P EHY+CM+DLLGR
Sbjct: 546 HDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGR 605
Query: 484 AGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVML 526
+G + DA I MP ++ K AANH +QLEP + PYV+L
Sbjct: 606 SGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLL 665
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
+N+YA +G W++VA IR LMRD+ + K+ G SW+ V +H F A D SHP +EI+ L
Sbjct: 666 SNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKL 725
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS-TSYGEPILVMKN 633
E + R++K GYVPD KE L+ HSEK+AVAFGL+S TS +PI + KN
Sbjct: 726 ETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKN 785
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+C DCH+A+K++S GREI +RD+ RFH KDG CSCG+YW
Sbjct: 786 LRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 236/503 (46%), Gaps = 66/503 (13%)
Query: 14 DLVTGKSL--HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVL 71
D+ G++L H L +L+ A ++N + LYSKC
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSA---------------------- 99
Query: 72 LAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
+A+AR +FD +P DLVS+ + S + G AL LF + E+
Sbjct: 100 ---------VAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLP 150
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLA-----------IYCGFDHYASVNNSLLTCYSRNG 178
+ FTL A C +L LA + G D SV +L+ +++NG
Sbjct: 151 NAFTLCAATQA-----CFASELFHLAGGAVLGLVFKLGFWGTD--VSVGCALIDMFAKNG 203
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +RVF + E + V W ++ Y Q EA++LF +M+ D YTL+S+L
Sbjct: 204 DLVAMRRVFDGLFE-RTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSML 262
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG--DMRDCMKVFEEIPQP 296
+A T L G Q H+ ++ G +S + GL+D+YAK + + +VF +P+
Sbjct: 263 SACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKH 322
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQI 355
+++ W ++SGY Q+ +Q + F K+ G P+ ++ ++ AC+NL G+QI
Sbjct: 323 NVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQI 382
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K + + V NALV+MY++ G++E+AR FD++ E N VS + + G +
Sbjct: 383 HTHCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNT 441
Query: 416 GMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
++ +E + + TF S++SA A G + +GQ+ ++ GF +
Sbjct: 442 YQ------DYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKA-GFGSDRAIG 494
Query: 475 SCMIDLLGRAGKLTDAERLIEAM 497
+ ++ + R G L DA ++ + M
Sbjct: 495 NSLVSMYSRCGYLVDACQVFDEM 517
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 12/262 (4%)
Query: 246 DLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP--DLVLW 301
D+ G HL+++G ++ + + L+ LY+KCS + VF+ +P DLV W
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSA-VAAARSVFDGMPVGLRDLVSW 120
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALT 359
M S S+ + +AL F + G P+ + AC S L G + L
Sbjct: 121 TAMASCLSRNGAEA-EALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLV 179
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K+ +SV AL+ M++K G+L RR+FD + E V +I YAQ G EA
Sbjct: 180 FKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEA 239
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ LF MLE P T S+LSAC G GQ+ S+ + G E + ++D
Sbjct: 240 VELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRL-GLESDSCVSCGLVD 298
Query: 480 LLGRA---GKLTDAERLIEAMP 498
+ ++ L +A + MP
Sbjct: 299 MYAKSHNGQSLHNAREVFNRMP 320
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 68/322 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C D +G+ +H +K+ + + N + +Y++ G + A HAF+Q
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ SF+ L R NT ++
Sbjct: 422 YEKNMVSFSGNLDGDGRS---------------------NT-----------------YQ 443
Query: 121 DMREKRFD--TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSR 176
D + +R + FT LI+A+++ L K +LH L++ GF ++ NSL++ YSR
Sbjct: 444 DYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G+L +A +VF EM + + +SW SM+ +H AL+LF +M++ + + T +
Sbjct: 504 CGYLVDACQVFDEMND-HNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIA 562
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQ----NSHIG--------SGLIDLYAKCSGDMR 284
+L+A + HA L+K G H G + ++DL + SG +
Sbjct: 563 VLSACS-----------HAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGR-SGLVE 610
Query: 285 DCMKVFEEIP-QPDLVLWNTMI 305
D + E+P Q D ++W T++
Sbjct: 611 DALDFINEMPCQVDALVWKTLL 632
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 36/213 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ L G+ LHAL LK + N + +YS+CG L A F++
Sbjct: 458 TFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF-DQIP---QPDLVSYNTLISAYADCGDTESAL 116
NV S+ +++ A+ A A +LF D I +P+ V+Y ++SA + G +
Sbjct: 518 NDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGK 577
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M++ GLI + C++ L R
Sbjct: 578 EHFRMMQKHH---------GLIPRMEHYACMVDLL-----------------------GR 605
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+G +++A EM D + W +++ A H
Sbjct: 606 SGLVEDALDFINEMPCQVDALVWKTLLGACKTH 638
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/646 (38%), Positives = 368/646 (56%), Gaps = 43/646 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I SA ++F + D +S+NT+ISA G+ E A+ + MR+
Sbjct: 419 NGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCIS 478
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
F L +++ + L +Q+HC A+ G D SV+N L+ Y G + + +V
Sbjct: 479 PSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKV 538
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M E DEVSWN+M+ + + E +++F M+ L + T ++L A + L
Sbjct: 539 FNSMAE-HDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLS 597
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
L G Q HA ++K G +++ + + LI YAK SGDM C +F + + D + WN+M
Sbjct: 598 VLELGKQVHAAVMKHGVMEDNVVDNALISCYAK-SGDMGSCEHLFTNMSDRRDAISWNSM 656
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY +A+ C + G D C+F +++AC++++ G ++HA I+
Sbjct: 657 ISGYIYNGNL-QEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSH 715
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG ++ A +LF+ M + N S NSMI+GYA+HG+G +A+ +F
Sbjct: 716 LESD-VVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIF 774
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E ML + P ++TFVSVLSAC+H G V G +YF MM D G P+ EHYSC+IDLLGR
Sbjct: 775 EEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGR 833
Query: 484 AGKLTDAERLIEAMPFNPGSIALK--------------------AANHFLQLEPSNAVPY 523
AGK+ + I+ MP P ++ + A+ L++EP N V Y
Sbjct: 834 AGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNY 893
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+ +N +AA+G WE+ A R MR +K+ G SW+ + +H F+A D SHP KEI+
Sbjct: 894 VLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIY 953
Query: 584 NYLEEMSRKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVM 631
L + + ++ AGYVP E L +HSEKLA+AF L +S G PI +M
Sbjct: 954 EKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSG-PIRIM 1012
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH A ++IS + R+I +RD+ RFH FKDG+CSCGDYW
Sbjct: 1013 KNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 232/455 (50%), Gaps = 28/455 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM- 122
++F N L+ +YA+ R+A+A Q+FD++P+ + VS+ L+S Y G E A +F+ M
Sbjct: 95 DLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAML 154
Query: 123 REKRFD--TDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
RE + FT L+ A + L Q+H L + +V N+L++ Y
Sbjct: 155 REVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGS 214
Query: 177 --NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM----VSLQLGLD 230
G A+RVF + I+D ++WN+++ Y + + LF++M +QL
Sbjct: 215 CTVGPPILAQRVF-DGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPT 273
Query: 231 MYTLASILTAFTSLEDLVGGL-QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+T S++TA + L Q ++KSG + ++GS L+ +A+ G + +
Sbjct: 274 EHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFAR-HGLTDEAKDI 332
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF-KKLNRVGYHPDDCSFVCVISACSNLS 348
F + Q + V N +I G ++++S++A+ F N V + D ++V ++SA + S
Sbjct: 333 FLSLKQKNAVTLNGLIVGLV-RQDFSEEAVKIFVGTRNTVDVNAD--TYVVLLSALAEYS 389
Query: 349 PS-----LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S +G+ +H ++ + +I+V+N LV MY+KCG +E A ++F M + +S
Sbjct: 390 ISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISW 449
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMK 462
N++I+ Q+G EA+ + M ++ I P+N +S LS+CA + GQ+ + +K
Sbjct: 450 NTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVK 509
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+G + + + ++ + G G ++D ++ +M
Sbjct: 510 --WGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM 542
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 176/370 (47%), Gaps = 30/370 (8%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+ LH I G +H + N L+ Y++ L A +VF EM E ++ VSW +V Y
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE-RNAVSWTCLVSGYVL 139
Query: 209 HREGLEALQLFQEMV-SLQLGL--DMYTLASILTAFT-SLEDLVG-GLQFHAHLIKSGFH 263
H EA ++F+ M+ +Q G +T ++L A D +G +Q H + K+ +
Sbjct: 140 HGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYA 199
Query: 264 QNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
N+ + + LI +Y C+ G +VF+ P DL+ WN ++S Y++K + + F
Sbjct: 200 SNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVA-STFTLF 258
Query: 323 KKL----NRVGYHPDDCSFVCVISACSNLSPSLG--KQIHALTIKIEIRSNRISVNNALV 376
K + +R+ P + +F +I+A S S S Q+ +K S+ + V +ALV
Sbjct: 259 KDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSD-LYVGSALV 317
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+ +++ G ++A+ +F + + N V+LN +I G + EA+++F T +
Sbjct: 318 SAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNAD 376
Query: 437 TFVSVLSACAH---------TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
T+V +LSA A G+V G + + D+ G ++++ + G +
Sbjct: 377 TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNG-----LVNMYAKCGAI 431
Query: 488 TDAERLIEAM 497
A ++ + M
Sbjct: 432 ESASKIFQLM 441
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 35/323 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L L GK +HA +K+ V + N I Y+K G + + H F
Sbjct: 585 TFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNM 644
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ D +S+N++IS Y G+ + A+
Sbjct: 645 S------------------------------DRRDAISWNSMISGYIYNGNLQEAMDCVW 674
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M D T S ++ A ++ L + +LH I + V ++L+ YS+ G
Sbjct: 675 LMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCG 734
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A ++F M + ++E SWNSM+ Y +H G +A+++F+EM+ + D T S+L
Sbjct: 735 RVDYASKLFNSMTQ-RNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVL 793
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
+A + + GL++ + G S +IDL + +G + + + +P +P+
Sbjct: 794 SACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGR-AGKIDKIKEYIQRMPIEPN 852
Query: 298 LVLWNTMISGYSQKEEYSDQALG 320
++W T++ Q ++ S+ LG
Sbjct: 853 ALIWRTVLVACRQSKDGSNIDLG 875
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/634 (39%), Positives = 349/634 (55%), Gaps = 58/634 (9%)
Query: 98 SYNTLISAYADCGDTESALSLFKDMREK---RFDTDGFTLSGLITASSNNLC-LIKQLHC 153
S+ I A G A+SLF MR R + L + + LC L LH
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 154 LAIYCG-FDHYASVNNSLLTCYSRNGF-------------------LDEAKRVFYEMGEI 193
LAI G F + N L C GF + ++VF EM E
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE- 132
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D VSWN++++ +H+ EAL + +EM D +TL+++L F D+ G+
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H + IK+GF + +GS LID+YA C+ M MKVF+ D VLWN+M++GY+Q
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCT-QMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGS 251
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
++ALG F+++ + G P +F +I A NLS LGKQ+HA I+ N I ++
Sbjct: 252 V-EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDN-IFIS 309
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
++L+ MY KCGN++ ARR+F+ + + VS +MI GYA HG EA LFE M N+
Sbjct: 310 SSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVK 369
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P +ITF++VL+AC+H G V G KYF+ M + +GF P EH + + D LGRAG L +A
Sbjct: 370 PNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYN 429
Query: 493 LIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
I M P S +A + A +LEP + +V+L+N+Y+ASG+
Sbjct: 430 FISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGR 489
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
W E A +R+ MR +G++K+P SWIEVK ++HVF+A D SHP I + L S +M +
Sbjct: 490 WNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIR 549
Query: 596 AGYVPDKE----------KR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GYVP+ E KR L HSEKLA+ FG++ST G I VMKNLR+C DCH A
Sbjct: 550 QGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIA 609
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KFIS I REI VRD RFH FKDG CSCGD+W
Sbjct: 610 TKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF + L+ YA ++ + ++FD D V +N++++ YA G E AL +F+ M
Sbjct: 204 DVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRML 263
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ T S LI A N L L KQLH I F+ +++SL+ Y + G +D
Sbjct: 264 QAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVD 323
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+RVF + + D VSW +M++ Y H EA LF+ M + + T ++LTA
Sbjct: 324 IARRVFNGI-QSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTAC 382
Query: 242 TSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ + G + F++ + GF + + L D + +GD+ + E+ +P
Sbjct: 383 SHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGR-AGDLDEAYNFISEMKIKPTSS 441
Query: 300 LWNTMI 305
+W+T++
Sbjct: 442 VWSTLL 447
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+F + L+ Y + + AR++F+ I PD+VS+ +I YA G T A LF+ M
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 364
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN------------SLL 171
+ T ++TA S H + G+ ++ S++N +L
Sbjct: 365 LGNVKPNHITFLAVLTACS---------HAGLVDNGWKYFNSMSNQYGFVPSLEHCAALA 415
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
R G LDEA EM W++++ A H+ + A ++ +++ L+
Sbjct: 416 DTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELE 470
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/711 (35%), Positives = 387/711 (54%), Gaps = 72/711 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V++ C D G+ +H L LK Y++ FI YS+ G +S A +
Sbjct: 144 TFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACN----- 195
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LFD + D+ ++N +IS + G AL +F
Sbjct: 196 --------------------------LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR K D T+S L I +++ +H AI G + V N+L+ Y++ G
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFG 289
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+ +F +M +++D VSWNS++ A+ Q+++ + AL ++ +M S+ + D+ TL S+
Sbjct: 290 ELRSAETIFNQM-KVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLA 348
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ L + + H + + F + +G+ +ID+YAK G + KVFE +P D
Sbjct: 349 SVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKL-GFIDSARKVFEGLPVKD 407
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSP-SLGKQI 355
++ WN++I+GYSQ +++A+ + + G P+ ++V +++A S L G +
Sbjct: 408 VISWNSLITGYSQ-NGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKA 466
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H IK + + I V+ LV MY KCG L DA LF +P ++VS N++I+ + HG
Sbjct: 467 HGQLIKNFLYFD-IFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGY 525
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G++A++LF+ M + P +ITFVS+LSAC+H+G V EGQ F +M++ +G P +HY
Sbjct: 526 GLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYG 585
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPS 518
CM+DL GRAG L A ++ MP P + ++H L++E
Sbjct: 586 CMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESE 645
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YV+L+NIYA G WE V +R L RDRG++K PG+S IEV K++ VF + +HP
Sbjct: 646 NVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPK 705
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+EI++ L ++ KMK GYVPD KE L HSE+LA+AFG++ST
Sbjct: 706 CEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKT 765
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLR+CGDCHNA KFIS I REI VRD+ RFH FKDG CSCGDYW
Sbjct: 766 TLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 238/432 (55%), Gaps = 10/432 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF-DT 129
L+ YA I AR FDQI D+ ++N++ISAYA G +A+ F + F +
Sbjct: 81 LINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQS 140
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
D +T +I A NL +++HCL + GF+ + S + YSR GF+ A +F
Sbjct: 141 DHYTFPPVIRA-CGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDN 199
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M I+D +WN+M+ + + + EAL++F EM + +D T++S+L L+D++
Sbjct: 200 M-MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIIS 258
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G+ H + IK G + + + LI++YAK G++R +F ++ D+V WN++++ +
Sbjct: 259 GVLIHVYAIKLGLEFDLFVCNALINMYAKF-GELRSAETIFNQMKVRDIVSWNSLLAAFE 317
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNR 368
Q ++ ALG + K++ +G PD + V + S + L L + IH + +
Sbjct: 318 QNKK-PVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHD 376
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-L 427
I++ NA++ MY+K G ++ AR++F+ +P + +S NS+I GY+Q+G+ EA+ ++ M
Sbjct: 377 IALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRY 436
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P T+VS+L+A + G + +G K + ++K+ F+ +C++D+ G+ GK
Sbjct: 437 YSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS--TCLVDMYGKCGK 494
Query: 487 LTDAERLIEAMP 498
L DA L +P
Sbjct: 495 LADALSLFYEVP 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 9/354 (2%)
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
L KQLH L + G ++ L+ Y+ G + A+ F ++ + KD +WNSM+ AY
Sbjct: 58 LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQI-QTKDVYTWNSMISAY 116
Query: 207 GQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
+ A+ F E +S L D YT ++ A +L+D G + H ++K GF +
Sbjct: 117 ARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECD 173
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+I + I Y++ C +F+ + D+ WN MISG+ + + +AL F ++
Sbjct: 174 VYIAASFIHFYSRFGFVSLAC-NLFDNMMIRDIGTWNAMISGFYLNGKVA-EALEVFDEM 231
Query: 326 NRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
D + ++ C L + G IH IK+ + + + V NAL+ MY+K G
Sbjct: 232 RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD-LFVCNALINMYAKFGE 290
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L A +F++M + VS NS++A + Q+ + AL ++ M + P +T VS+ S
Sbjct: 291 LRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASV 350
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
A G + + F + + +ID+ + G + A ++ E +P
Sbjct: 351 AAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 263/790 (33%), Positives = 400/790 (50%), Gaps = 118/790 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T+ ++L+ C + L G+ +H+L +K NL+P + L NH + +Y+ C A AF+
Sbjct: 45 TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSY---------------- 99
+ N++S+ L+AA+A + + +++ Q PD V++
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164
Query: 100 -------------------NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL--- 137
N L++ Y CG A +F M R ++G
Sbjct: 165 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHAL 224
Query: 138 ------------------ITASSNNLCLI-------------KQLHCLAIYCGFDHYASV 166
I A+ + + I + +H GF+ V
Sbjct: 225 HGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLV 284
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGE-IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
N+++T Y R G ++EA++VF M E ++D VSWN M+ AY + G +A+QL+Q M
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM--- 341
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
QL D T S+L+A +S ED+ G H ++ +N +G+ L+ +YAKC G +
Sbjct: 342 QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC-GSHTE 400
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSD------QALGCFKKLNRVGYHPDDCSFVC 339
VF+++ Q ++ W T+IS Y ++ ++ Q L K + PD +FV
Sbjct: 401 ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVT 460
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+++AC+++S GK + + S++ +V A+V +Y KCG +E+ RR+FD +
Sbjct: 461 ILNACADVSALEQGKMVSEQAASCGLSSDK-AVGTAVVNLYGKCGEIEEGRRIFDGVCSR 519
Query: 399 NTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
V L N+MIA YAQ G EAL+LF M + P + +FVS+L AC+HTG +G+ Y
Sbjct: 520 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSY 579
Query: 458 F-SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL---------- 506
F SM + +H+ C+ DLLGR G+L +AE +E +P P ++A
Sbjct: 580 FTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNH 639
Query: 507 -------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+ AN L+LEP A YV L+NIYA KW VA +R+ M ++GV+K+ G S
Sbjct: 640 RDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVST 699
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLV 607
IE+ K MH F D +HP +EI L ++ +MK+ GYVPD KE+ L
Sbjct: 700 IEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLF 759
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSE+LA+A GL+ST G P+ V KNLR+C DCH A K IS IAGR+I VRD RFH FK
Sbjct: 760 SHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFK 819
Query: 668 DGRCSCGDYW 677
DG+CSC DYW
Sbjct: 820 DGKCSCQDYW 829
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/710 (34%), Positives = 384/710 (54%), Gaps = 68/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C ++ G +H L K + ++N + +YSKCG L
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL---------- 350
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR LFD ++VS+NT+I Y+ GD L +
Sbjct: 351 ---------------------GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQ 389
Query: 121 DM-REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M RE++ + T+ ++ A S + L +K++H A GF V N+ + Y++
Sbjct: 390 EMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKC 449
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
LD A+RVF M E K SWN+++ A+ Q+ ++L LF M+ + D +T+ S+
Sbjct: 450 SSLDCAERVFCGM-EGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSL 508
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A L+ L G + H ++++G + IG L+ LY +CS + + +F+++
Sbjct: 509 LLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKL-IFDKMENKS 567
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
LV WN MI+G+SQ E +AL F+++ G P + + V+ ACS +S LGK++H
Sbjct: 568 LVCWNVMITGFSQNE-LPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVH 626
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ +K + + V AL+ MY+KCG +E ++ +FDR+ E + N +IAGY HG G
Sbjct: 627 SFALKAHLSEDAF-VTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHG 685
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
++A+ LFE M P + TF+ VL AC H G V EG KY M++++G +P+ EHY+C
Sbjct: 686 LKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYAC 745
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
++D+LGRAG+LT+A +L+ MP P S I + + L+LEP+
Sbjct: 746 VVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNK 805
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
A YV+L+N+YA GKW+EV +R+ M++ G+ K G SWIE+ ++ F+ DGS
Sbjct: 806 AENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSES 865
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
K+I ++ +K+ + GY PD K K L HSEKLA++FGLL+T+ G
Sbjct: 866 KKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTT 925
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ V KNLRIC DCHNAIK +S + R+I VRD RFH FK+G C+CGD+W
Sbjct: 926 LRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/576 (23%), Positives = 245/576 (42%), Gaps = 96/576 (16%)
Query: 5 VLKTCVGRRDLVTGKSLHALY-----LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+L+ C +++ G+ +HAL L+N V LS I +YS CG S + F+
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDV----VLSTRIIAMYSACGSPSDSRGVFDA 153
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLF-----------DQIPQP-------------- 94
+ ++F +N LL+ Y+R A LF D P
Sbjct: 154 AKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVEL 213
Query: 95 ---------------DLVSYNTLISAYADCGDTESALSLFKDMREKRF-----------D 128
D N LI+ Y CG ESA+ +F+ MR + +
Sbjct: 214 GEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSE 273
Query: 129 TDGF-------------TLSGLITASSNNLCLIKQ------------LHCLAIYCGFDHY 163
GF GL+ + + +I +H LA G
Sbjct: 274 NGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEE 333
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+VNNSL+ YS+ G+L EA R ++M K+ VSWN+++ Y + + +L QEM
Sbjct: 334 VTVNNSLVDMYSKCGYLGEA-RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ 392
Query: 224 -SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
++ ++ T+ ++L A + L+ + H + + GF ++ + + + YAKCS
Sbjct: 393 REEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSS- 451
Query: 283 MRDCM-KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
DC +VF + + WN +I ++Q + ++L F + G PD + ++
Sbjct: 452 -LDCAERVFCGMEGKTVSSWNALIGAHAQN-GFPGKSLDLFLVMMDSGMDPDRFTIGSLL 509
Query: 342 SACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
AC+ L GK+IH ++ + + + +L+++Y +C ++ + +FD+M +
Sbjct: 510 LACARLKFLRCGKEIHGFMLRNGLELDEF-IGISLMSLYIQCSSMLLGKLIFDKMENKSL 568
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
V N MI G++Q+ + EAL F ML I P I VL AC+ + G++ S
Sbjct: 569 VCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSF 628
Query: 461 MKDMFGFEPEGEHYSC-MIDLLGRAGKLTDAERLIE 495
+ E +C +ID+ + G + ++ + +
Sbjct: 629 A--LKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFD 662
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 160/351 (45%), Gaps = 53/351 (15%)
Query: 261 GFHQNSHIG--------------------SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
G H+N H+G + +I +Y+ C G D VF+ + DL L
Sbjct: 103 GHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSAC-GSPSDSRGVFDAAKEKDLFL 161
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+N ++SGYS+ + D + L+ PD+ + CV AC+ ++ LG+ +HAL
Sbjct: 162 YNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALA 221
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K S+ V NAL+AMY KCG +E A ++F+ M N VS NS++ +++G E
Sbjct: 222 LKAGGFSDAF-VGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGEC 280
Query: 420 LRLFEWML---ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+F+ +L E + P T V+V+ ACA G+V G + + G E +
Sbjct: 281 CGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKL-GITEEVTVNNS 339
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
++D+ + G L +A L + N G N V + + Y+ G +
Sbjct: 340 LVDMYSKCGYLGEARALFD---MNGG---------------KNVVSWNTIIWGYSKEGDF 381
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM--IKEIHNY 585
V L+++ ++K + + V ++V A G H + +KEIH Y
Sbjct: 382 RGVF---ELLQEMQREEKVRVNEVTV---LNVLPACSGEHQLLSLKEIHGY 426
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/672 (36%), Positives = 374/672 (55%), Gaps = 67/672 (9%)
Query: 41 ILLYSKCGCLSAAHHA--FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVS 98
+L+ CG L HA F +N F L+ AY+ R+ AR++FD I D+VS
Sbjct: 148 LLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVS 207
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAI 156
+ +++ +A+ + AL LF MR F + FT + + A + K +H A+
Sbjct: 208 WTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCAL 267
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
++ V +LL Y+++G +D+A+ F E+ + KD + W+ M+ Y Q + EA+
Sbjct: 268 KSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPK-KDVIPWSFMIARYAQSDQSKEAV 326
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
++F +M + + +T AS+L A ++E L G Q H H+IK G H + + + L+D+Y
Sbjct: 327 EMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVY 386
Query: 277 AKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
AKC G M + M +F E P + D+ WNT+I G+ Q + ++AL F + +
Sbjct: 387 AKC-GRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGD-GEKALRLFLNMLEYRVQATEV 444
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
++ + AC++L+ G QIH+LT+K + I V NAL+ MY+KCG+++DAR +FD
Sbjct: 445 TYSSALRACASLAALEPGLQIHSLTVKTTFDKD-IVVTNALIDMYAKCGSIKDARLVFDL 503
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
M + + VS N+MI+GY+ HG+ ACA+ G + +G
Sbjct: 504 MNKQDEVSWNAMISGYSMHGL----------------------------ACANAGLLDQG 535
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA------ 508
Q YF+ M G EP EHY+CM+ LLGR G L A +LI+ +PF P + +A
Sbjct: 536 QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACV 595
Query: 509 -----------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
A H L++EP + +V+L+N+YA + +W+ VA++R+ M+ +GV+K+PG
Sbjct: 596 IHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGL 655
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKR 605
SWIE + +H F D SHP ++ I+ LE + K K+AGY+P +KE+
Sbjct: 656 SWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERL 715
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
L HSE+LA++FG++ T G PI +MKNLRIC DCH AIK IS + REI VRD RFH
Sbjct: 716 LWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHH 775
Query: 666 FKDGRCSCGDYW 677
F++G CSCGDYW
Sbjct: 776 FQEGLCSCGDYW 787
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 252/501 (50%), Gaps = 40/501 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ L+ C+ + + GK LH LK + GCL
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILK------------------RGGCL---------- 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F++N+LL Y + + A +LFD++P+ + +S+ TLI YA+ A+ LF
Sbjct: 72 ---DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFV 128
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + + F + ++ + C L +H G + A V +L+ YS G
Sbjct: 129 RLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCG 188
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+ VF + KD VSW MV + ++ EAL+LF +M + + +T AS+
Sbjct: 189 RVDVAREVFDGI-LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVF 247
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A LE G H +KS + + ++G L+DLY K SGD+ D FEEIP+ D+
Sbjct: 248 KACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTK-SGDIDDARXAFEEIPKKDV 306
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W+ MI+ Y+Q ++ S +A+ F ++ + P+ +F V+ AC+ + +LG QIH
Sbjct: 307 IPWSFMIARYAQSDQ-SKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHC 365
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS-LNSMIAGYAQHGIG 416
IKI + S+ + V+NAL+ +Y+KCG +E++ LF P N V+ N++I G+ Q G G
Sbjct: 366 HVIKIGLHSD-VFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDG 424
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+ALRLF MLE + T +T+ S L ACA + G + S+ F+ + +
Sbjct: 425 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKT-TFDKDIVVTNA 483
Query: 477 MIDLLGRAGKLTDAERLIEAM 497
+ID+ + G + DA + + M
Sbjct: 484 LIDMYAKCGSIKDARLVFDLM 504
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 34/311 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V K C+G GKS+H LK+ Y+ + LY+K G + A AF +
Sbjct: 242 TFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEI 301
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V ++ ++A YA+ DQ ++ A+ +F
Sbjct: 302 PKKDVIPWSFMIARYAQS----------DQ---------------------SKEAVEMFF 330
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR+ + FT + ++ A + L L Q+HC I G V+N+L+ Y++ G
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ + +F E D WN+++V + Q +G +AL+LF M+ ++ T +S L
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 450
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL L GLQ H+ +K+ F ++ + + LID+YAKC G ++D VF+ + + D
Sbjct: 451 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC-GSIKDARLVFDLMNKQDE 509
Query: 299 VLWNTMISGYS 309
V WN MISGYS
Sbjct: 510 VSWNAMISGYS 520
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L+ C L G +H+L +K ++N I +Y+KCG + A F+
Sbjct: 445 TYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM 504
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQ 90
+ S+N +++ Y+ + L DQ
Sbjct: 505 NKQDEVSWNAMISGYSMHGLACANAGLLDQ 534
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/600 (39%), Positives = 351/600 (58%), Gaps = 44/600 (7%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYC-GFDHYASVN 167
D A+ M D T S LI S + K++H I+C G++ V
Sbjct: 35 DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVH-EHIFCKGYEPKMFVV 93
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+LL Y + L+EA+ +F EM E ++ VSW +M+ AY ++ +AL+ M +
Sbjct: 94 NTLLNMYVKFNLLEEAEDLFDEMPE-RNVVSWTTMISAY-SNKLNDKALKCLILMFREGV 151
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+M+T +S+L A L +L Q H +IK+G + + S LID+Y+K S D+ + +
Sbjct: 152 RPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWS-DLDNAL 207
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+E+P DLV+WN++I G++Q + ++AL FK++ R G+ D + V+ AC+ L
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSD-GNEALNLFKRMKRAGFLADQATLTSVLRACTGL 266
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LG+Q+H +K + + +NNAL+ MY KCG+LEDA F RM E + +S ++M
Sbjct: 267 ALLELGRQVHVHVLKFD---QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTM 323
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+AG AQ+G +AL LFE M E+ P IT + VL AC+H G V +G YF MK +FG
Sbjct: 324 VAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFG 383
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAA 509
+P EHY C+IDLLGRAG+L +A +LI M P S+ A+ AA
Sbjct: 384 VDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAA 443
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++LEP +A Y++L+NIYA + +WE+VA +R+ M +RG++K PG SWIEV KQ+HVF
Sbjct: 444 KKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVF 503
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ D SHP I+EI L ++ ++ GYVPD KE L +HSEKLA+ F
Sbjct: 504 ILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMF 563
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL++ S + + + KNLRICGDCH K +S + R I +RD R+H F+DG CSCGDYW
Sbjct: 564 GLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 157/292 (53%), Gaps = 7/292 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F + +F N LL Y + + A LFD++P+ ++VS+ T+ISAY++ + ++
Sbjct: 80 HIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKA 139
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
L RE + FT S ++ A + L ++QLHC I G + V ++L+ Y
Sbjct: 140 LKCLILMFREG-VRPNMFTYSSVLRA-CDGLPNLRQLHCGIIKTGLESDVFVRSALIDVY 197
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ LD A VF EM +D V WNS++ + Q+ +G EAL LF+ M D TL
Sbjct: 198 SKWSDLDNALGVFDEM-PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATL 256
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A T L L G Q H H++K F Q+ + + LID+Y KC G + D F +
Sbjct: 257 TSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKC-GSLEDANSAFSRMV 313
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ D++ W+TM++G +Q YS QAL F+ + G P+ + + V+ ACS+
Sbjct: 314 EKDVISWSTMVAGLAQN-GYSRQALELFESMKESGSRPNYITVLGVLFACSH 364
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 145/296 (48%), Gaps = 35/296 (11%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF + L+ Y++ + +A +FD++P DLV +N++I +A D AL+LFK M
Sbjct: 185 SDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM 244
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ F D TL+ ++ A + L L +Q+H + FD +NN+L+ Y + G L
Sbjct: 245 KRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL--KFDQDLILNNALIDMYCKCGSL 302
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++A F M E KD +SW++MV Q+ +AL+LF+ M + T+ +L A
Sbjct: 303 EDANSAFSRMVE-KDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFA 361
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQ-------------NSHIGSGLIDLYAKCSGDMRDCM 287
+ HA L++ G++ H G LIDL + +G + + +
Sbjct: 362 CS-----------HAGLVEKGWYYFRSMKKLFGVDPGREHYGC-LIDLLGR-AGRLDEAV 408
Query: 288 KVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
K+ E+ +PD V W T++ G + D A+ KK+ + P+D ++S
Sbjct: 409 KLIHEMECEPDSVTWRTLL-GACRVHRNVDLAIYAAKKI--IELEPEDAGTYILLS 461
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +H LK L+N I +Y KCG L A+ AF++
Sbjct: 255 TLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRM 312
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+V S++ ++A A+ A +LF+ + + P+ ++ ++ A + G E
Sbjct: 313 VEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGW 372
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M+ K F D G +HY L+ R
Sbjct: 373 YYFRSMK-KLFGVDP---------------------------GREHYG----CLIDLLGR 400
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LDEA ++ +EM D V+W +++ A HR A+ ++++ L+
Sbjct: 401 AGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELE 450
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 378/665 (56%), Gaps = 39/665 (5%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
+ G L AH + +N+F + ++ Y + R AR++FD +P+ D V +NT+IS
Sbjct: 130 RVGVLLHAHSIVDGVA-SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHY 163
++ E ++ +F DM + D TL+ ++TA + L + CLA G
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD 248
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V L++ YS+ G + R+ ++ + D +S+N+M+ Y + E A+ LF+E++
Sbjct: 249 VYVLTGLISLYSKCGKSCKG-RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ ++ TL ++ + L +K G + + L +Y + + ++
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN-EV 366
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ ++F+E P+ L WN MISGY+Q +D+A+ F+++ P+ + ++SA
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNG-LTDRAISLFQEM-MPQLSPNPVTVTSILSA 424
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C+ L S+GK +H L IK E + + V+ ALV MY+KCG++ +AR+LFD M + N V+
Sbjct: 425 CAQLGALSIGKWVHGL-IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
N+MI GY HG G EAL+LF ML++ IPPT +TF+S+L AC+H+G V+EG + F M
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIA 505
+ +GF+P EHY+CM+D+LGRAG+LT+A IE MP PG +A
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
A+ QL+P N YV+L+NIY+ + + A++R++++ R + K PG + IE+ Q
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQ 663
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-----------VPDKEKRLV--HHSEK 612
+VF + D SHP I LE+++ KM++AGY V D+EK L+ HSEK
Sbjct: 664 QYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEK 723
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AFGL+ST G I ++KNLR+C DCH A KFIS I R I VRD RFH FK+G CS
Sbjct: 724 LAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICS 783
Query: 673 CGDYW 677
CGDYW
Sbjct: 784 CGDYW 788
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 230/421 (54%), Gaps = 10/421 (2%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE-KRFDTDGFTLSGLIT 139
+A RQLF+++ +PDL +N LI ++D G +S++ L+ +R+ D FT + I+
Sbjct: 62 VAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAIS 121
Query: 140 ASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A+S + + LH +I G V ++++ Y + + A++VF M E +D V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE-RDTV 180
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
WN+M+ + ++ +++++F +M+ + L D TLA++LTA L++ G+
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
K G H + ++ +GLI LY+KC + + +F++I QPDL+ +N MISGY+ E ++
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSCKGRI-LFDQIDQPDLISYNAMISGYTFNHE-TES 298
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F++L G + + V +I + L + I L++KI I + SV+ AL
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIIL-QPSVSTALT 357
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+Y + ++ AR+LFD PE + S N+MI+GY Q+G+ A+ LF+ M+ + P +
Sbjct: 358 TVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPV 416
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T S+LSACA G ++ G+ ++K E + ++D+ + G + +A +L +
Sbjct: 417 TVTSILSACAQLGALSIGKWVHGLIKSE-RLESNVYVSTALVDMYAKCGSIVEARQLFDL 475
Query: 497 M 497
M
Sbjct: 476 M 476
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 22/228 (9%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQN----SHIGSGLIDLYAKCSGDMRDCMKVFE 291
++L T+L L LQ A LI G H + + + DL G + ++F
Sbjct: 19 TLLNNATTLSQL---LQIQAQLILHGIHYDLSSITKLTHKFFDL-----GAVAHVRQLFN 70
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS 350
++ +PDL L+N +I G+S ++ + L + PD+ ++ ISA S L
Sbjct: 71 KVSKPDLFLFNVLIRGFSDN-GLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDE 129
Query: 351 -LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G +HA +I + SN + V +A+V +Y K E AR++FD MPE +TV N+MI+G
Sbjct: 130 RVGVLLHAHSIVDGVASN-LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
++++ +++R+F ML+ + + T +VL+A VAE Q+Y
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTA------VAELQEY 230
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H L + + Y+S + +Y+KCG + A F+
Sbjct: 417 TVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM 476
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV ++N ++ Y A +LF ++ Q P V++ +++ A + G
Sbjct: 477 VDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGN 536
Query: 117 SLFKDM 122
+F M
Sbjct: 537 EIFHSM 542
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 372/639 (58%), Gaps = 37/639 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ +YAR I SARQ+FD+ PQ + ++N +I AY+ G ALSL+ M + D
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 131 GFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T + ++ A + +L L ++ A+ G+ V ++L Y++ G +DEA RVF
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+MG +D V W +M+ Q+ + EA+ ++++M ++ D + ++ A T+L
Sbjct: 165 KMGR-RDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK 223
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
GL H ++I+ + + + L+D+YAK +G + VF + +++ W+ +ISG+
Sbjct: 224 MGLSIHGYMIRKDIIMDVIVQTSLVDMYAK-NGHLELASCVFRRMLYKNVISWSALISGF 282
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSN 367
+Q ++ AL + GY PD S V V+ ACS + LGK +H ++ + +
Sbjct: 283 AQNG-FAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFD 340
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+S + A++ MYSKCG+L AR +FD++ +++S N++IA Y HG G EAL LF M
Sbjct: 341 CVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMR 399
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
ETN+ P + TF S+LSA +H+G V +G+ +FS+M + + +P +HY+CM+DLL RAG++
Sbjct: 400 ETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRV 459
Query: 488 TDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIY 530
+A+ LIE+M PG I AA L+L P + Y +++N +
Sbjct: 460 EEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFF 519
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A + +W+EVA +R++M+ G++K PG+S +EV ++H F+ ED SH +EI L ++
Sbjct: 520 ATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLD 579
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
+MK GYVP KE+ L +HSE+LA+AFGLL+T G +L+ KNLR+CG
Sbjct: 580 YEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCG 639
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH A KFIS I REI VRD RFH FKDG CSCGDYW
Sbjct: 640 DCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 207/402 (51%), Gaps = 32/402 (7%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+S + I ++H L I G + + N L+ Y+R G ++ A++VF + + + +WN
Sbjct: 16 TSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVD-AWN 74
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M++AY + EAL L+ M S + D T +L A T DL G + +
Sbjct: 75 AMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQ 134
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G+ + +G+ +++LYAKC G M + M+VF+++ + DLV W TMI+G +Q + + +A+
Sbjct: 135 GYGDDVFVGAAVLNLYAKC-GKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQ-AREAVD 192
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMY 379
++++++ D + +I AC+ L S +G IH I+ +I + I V +LV MY
Sbjct: 193 IYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVI-VQTSLVDMY 251
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+K G+LE A +F RM N +S +++I+G+AQ+G AL+L M P +++ V
Sbjct: 252 AKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLV 311
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC-----MIDLLGRAGKLTDAERLI 494
SVL AC+ G + + K + G+ H+ C +ID+ + G L+ A +
Sbjct: 312 SVLLACSQVG-------FLKLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVF 364
Query: 495 EAMPFNPGSIAL--------------KAANHFLQLEPSNAVP 522
+ + F SI+ +A + FLQ+ +N P
Sbjct: 365 DQISFRD-SISWNAIIASYGIHGSGEEALSLFLQMRETNVKP 405
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 150/331 (45%), Gaps = 45/331 (13%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G S+H ++ + + + +Y+K G L A F + + NV S++ L++ +A+
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 78 QLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
+A QL + +PD VS +++ A + G F G +
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG----------------FLKLGKS 328
Query: 134 LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
+ G I +++LH FD +S +++ YS+ G L A+ VF ++
Sbjct: 329 VHGYI---------VRRLH-------FDCVSS--TAVIDMYSKCGSLSFARTVFDQI-SF 369
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D +SWN+++ +YG H G EAL LF +M + D T AS+L+AF+ + G +
Sbjct: 370 RDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYW 429
Query: 254 HAHLIKSGFHQNSHIGSG-LIDLYAKCSGDMRDCMKVFEE-IPQPDLVLWNTMISGYSQK 311
+ ++ Q S ++DL ++ +G + + ++ E I +P + +W ++SG
Sbjct: 430 FSIMVNEYKIQPSEKHYACMVDLLSR-AGRVEEAQELIESMITEPGIAIWVALLSGCLNH 488
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
++ + K L +PDD ++S
Sbjct: 489 GKFLIGEMAAKKVLE---LNPDDPGIYSLVS 516
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L GKS+H Y+ + F S I +YSKCG LS A F+Q +
Sbjct: 313 VLLACSQVGFLKLGKSVHG-YIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRD 371
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
S+N ++A+Y A LF Q+ + PD ++ +L+SA++ G E F
Sbjct: 372 SISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFS 431
Query: 121 DM 122
M
Sbjct: 432 IM 433
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 378/665 (56%), Gaps = 39/665 (5%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
+ G L AH + +N+F + ++ Y + R AR++FD +P+ D V +NT+IS
Sbjct: 130 RVGVLLHAHSIVDGVA-SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHY 163
++ E ++ +F DM + D TL+ ++TA + L + CLA G
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD 248
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V L++ YS+ G + R+ ++ + D +S+N+M+ Y + E A+ LF+E++
Sbjct: 249 VYVLTGLISLYSKCGKSCKG-RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ ++ TL ++ + L +K G + + L +Y + + ++
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN-EV 366
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ ++F+E P+ L WN MISGY+Q +D+A+ F+++ P+ + ++SA
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNG-LTDRAISLFQEM-MPQLSPNPVTVTSILSA 424
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C+ L S+GK +H L IK E + + V+ ALV MY+KCG++ +AR+LFD M + N V+
Sbjct: 425 CAQLGALSIGKWVHGL-IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
N+MI GY HG G EAL+LF ML++ IPPT +TF+S+L AC+H+G V+EG + F M
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIA 505
+ +GF+P EHY+CM+D+LGRAG+LT+A IE MP PG +A
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
A+ QL+P N YV+L+NIY+ + + A++R++++ R + K PG + IE+ Q
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQ 663
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-----------VPDKEKRLV--HHSEK 612
+VF + D SHP I LE+++ KM++AGY V D+EK L+ HSEK
Sbjct: 664 QYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEK 723
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AFGL+ST G I ++KNLR+C DCH A KFIS I R I VRD RFH FK+G CS
Sbjct: 724 LAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICS 783
Query: 673 CGDYW 677
CGDYW
Sbjct: 784 CGDYW 788
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 231/421 (54%), Gaps = 10/421 (2%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFDTDGFTLSGLIT 139
+A RQLF+++ +PDL +N LI ++D G +S++ L+ +R+K D FT + I+
Sbjct: 62 VAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAIS 121
Query: 140 ASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A+S + + LH +I G V ++++ Y + + A++VF M E +D V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE-RDTV 180
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
WN+M+ + ++ +++++F +M+ + L D TLA++LTA L++ G+
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
K G H + ++ +GLI LY+KC + + +F++I QPDL+ +N MISGY+ E ++
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSCKGRI-LFDQIDQPDLISYNAMISGYTFNHE-TES 298
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F++L G + + V +I + L + I L++KI I + SV+ AL
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIIL-QPSVSTALT 357
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+Y + ++ AR+LFD PE + S N+MI+GY Q+G+ A+ LF+ M+ + P +
Sbjct: 358 TVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPV 416
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T S+LSACA G ++ G+ ++K E + ++D+ + G + +A +L +
Sbjct: 417 TVTSILSACAQLGALSIGKWVHGLIKSE-RLESNVYVSTALVDMYAKCGSIVEARQLFDL 475
Query: 497 M 497
M
Sbjct: 476 M 476
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 20/227 (8%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQN----SHIGSGLIDLYAKCSGDMRDCMKVFE 291
++L T+L L LQ A LI G H + + + DL G + ++F
Sbjct: 19 TLLNNATTLSQL---LQIQAQLILHGIHYDLSSITKLTHKFFDL-----GAVAHVRQLFN 70
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS- 350
++ +PDL L+N +I G+S + PD+ ++ ISA S L
Sbjct: 71 KVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDER 130
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G +HA +I + SN + V +A+V +Y K E AR++FD MPE +TV N+MI+G+
Sbjct: 131 VGVLLHAHSIVDGVASN-LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGF 189
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+++ +++R+F ML+ + + T +VL+A VAE Q+Y
Sbjct: 190 SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTA------VAELQEY 230
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H L + + Y+S + +Y+KCG + A F+
Sbjct: 417 TVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM 476
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV ++N ++ Y A +LF ++ Q P V++ +++ A + G
Sbjct: 477 VDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGN 536
Query: 117 SLFKDM 122
+F M
Sbjct: 537 EIFHSM 542
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 367/658 (55%), Gaps = 39/658 (5%)
Query: 52 AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
A H + +V +N L+A Y + R+ ARQ+FD +P + VS N L+S YA G
Sbjct: 37 AVHARVVRAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGR 96
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNS 169
AL+L +R F + + LS + A+++ + + +Q H AI G + V ++
Sbjct: 97 HRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSA 153
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+L Y + +DEA +VF + + ++NSM+ + + + + + MV
Sbjct: 154 VLHMYCQCAHMDEAVKVFDNVSSF-NVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQW 212
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D + ++L S +++V G Q H +K N ++GS L+D+Y KC + +V
Sbjct: 213 DHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP-HEANRV 271
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE +P+ ++V W +++ Y+Q E + D AL F + G P++ ++ +++C+ L+
Sbjct: 272 FEVLPEKNIVSWTAIMTAYTQNELFED-ALQLFLDMEMEGVRPNEFTYAVALNSCAGLAT 330
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G + A T+K + V NAL+ MYSK G++EDARR+F MP + VS NS+I
Sbjct: 331 LKNGNALGACTMKTG-HWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIII 389
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GYA HG EA+ F ML P+ +TF+ VLSACA G V EG Y ++M G +
Sbjct: 390 GYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK 449
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANH 511
P EHY+CM+ LL R G+L +AER IE+ +A ++ A
Sbjct: 450 PGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQ 509
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
QL+P + YV+L+N+YA + +W+ V +RRLMR+ GV+K+PG SWI+V ++HVF +
Sbjct: 510 IFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTS 569
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
ED HP +++I L+E+ K+K GYVP+ KE+ L++HSEKLA+AFGL
Sbjct: 570 EDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGL 629
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ T GE I +MKN+RIC DCH AIK IS GR I VRDT RFHC +DG CSC DYW
Sbjct: 630 IRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 44/251 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ VL C +++V G +H LK + + Y+ + + +Y KC A+ F
Sbjct: 216 SYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVL 275
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ S+ ++ AY + +LF E AL LF
Sbjct: 276 PEKNIVSWTAIMTAYTQN-------ELF------------------------EDALQLFL 304
Query: 121 DMREKRFDTDGFTL-------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
DM + + FT +GL T + N L + G V N+L+
Sbjct: 305 DMEMEGVRPNEFTYAVALNSCAGLATLKNGN-----ALGACTMKTGHWGLLPVCNALMNM 359
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YS++G +++A+RVF M +D VSWNS+++ Y H EA++ F +M+ + T
Sbjct: 360 YSKSGSVEDARRVFLSM-PCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVT 418
Query: 234 LASILTAFTSL 244
+L+A L
Sbjct: 419 FIGVLSACAQL 429
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/561 (40%), Positives = 342/561 (60%), Gaps = 39/561 (6%)
Query: 149 KQLHCLAIYCG--FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K LHC + G D +A N LL Y ++ FL +A ++F EM E ++ +S+ +++ Y
Sbjct: 58 KGLHCEILKRGGCLDLFAW--NILLNMYVKSDFLCDASKLFDEMPE-RNTISFVTLIQGY 114
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ LEA++LF + ++ + +T AS+L A ++E L G Q H H+IK G H +
Sbjct: 115 AESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV 173
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + L+D+YAKC G M + M++F E P + V WNT+I G+ Q + ++AL F +
Sbjct: 174 FVSNALMDVYAKC-GRMENSMELFAESPHRNDVTWNTVIVGHVQLGD-GEKALRLFLNML 231
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
+ ++ + AC++L+ G QIH+LT+K + I V NAL+ MY+KCG++
Sbjct: 232 EYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD-IVVTNALIDMYAKCGSI 290
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+DAR +FD M + + VS N+MI+GY+ HG+G EALR+F+ M ET + P +TFV VLSAC
Sbjct: 291 KDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSAC 350
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA 505
A+ G + +GQ YF+ M G EP EHY+CM+ LLGR G L A +LI+ +PF P +
Sbjct: 351 ANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 410
Query: 506 LKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
+A A L++EP + +V+L+N+YA + +W+ VA++R+ M+
Sbjct: 411 WRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKR 470
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-------- 600
+GV+K+PG SWIE + +H F D SHP ++ I+ LE + K K+AGY+P
Sbjct: 471 KGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLD 530
Query: 601 ----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
+KE+ L HSE+LA++FG++ T G PI +MKNLRIC DCH AIK IS + REI
Sbjct: 531 VEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIV 590
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F++G CSCGDYW
Sbjct: 591 VRDINRFHHFQEGLCSCGDYW 611
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 38/411 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ L+ C+ + + GK LH LK + GCL
Sbjct: 41 YANALQDCIQKDEPSRGKGLHCEILK------------------RGGCL----------- 71
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++F++N+LL Y + + A +LFD++P+ + +S+ TLI YA+ A+ LF
Sbjct: 72 --DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVR 129
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ + + FT + ++ A + L L Q+HC I G V+N+L+ Y++ G
Sbjct: 130 LHREVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 188
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ + +F E +++V+WN+++V + Q +G +AL+LF M+ ++ T +S L
Sbjct: 189 MENSMELFAESPH-RNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 247
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A SL L GLQ H+ +K+ F ++ + + LID+YAKC G ++D VF+ + + D V
Sbjct: 248 ACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC-GSIKDARLVFDLMNKQDEV 306
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
WN MISGYS +AL F K+ PD +FV V+SAC+N G+
Sbjct: 307 SWNAMISGYSM-HGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTS 365
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
I+ I +V + + G+L+ A +L D +P +V + + G
Sbjct: 366 MIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLG 416
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 6/257 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H++VF N L+ YA+ R+ ++ +LF + P + V++NT+I + GD E
Sbjct: 163 HVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEK 222
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLT 172
AL LF +M E R T S + A ++ L Q+H L + FD V N+L+
Sbjct: 223 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALID 282
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y++ G + +A+ VF M + +DEVSWN+M+ Y H G EAL++F +M ++ D
Sbjct: 283 MYAKCGSIKDARLVFDLMNK-QDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKL 341
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T +L+A + L G + +I+ G + ++ L + G + +K+ +
Sbjct: 342 TFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR-GGHLDKAVKLID 400
Query: 292 EIP-QPDLVLWNTMISG 307
EIP QP +++W ++
Sbjct: 401 EIPFQPSVMVWRALLGA 417
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 83/215 (38%), Gaps = 36/215 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L+ C L G +H+L +K ++N I +Y+KCG + A
Sbjct: 241 TYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA------- 293
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R +FD + + D VS+N +IS Y+ G AL +F
Sbjct: 294 ------------------------RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFD 329
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC----YSR 176
M+E D T G+++A + N L+ Q DH TC R
Sbjct: 330 KMQETEVKPDKLTFVGVLSACA-NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR 388
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
G LD+A ++ E+ + W +++ A H +
Sbjct: 389 GGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHND 423
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 332/540 (61%), Gaps = 35/540 (6%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
D++ + N ++ Y++ G LD+A+R+F EM KD V+W +++ + Q+ +AL LF
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFDEM-PTKDMVTWTALIAGFSQNNRPRDALLLF 177
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M+ L + +TL+S+L A S L G Q HA +K G+ + ++GS L+D+YA+C
Sbjct: 178 PQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC 237
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G M F+ +P V WN +ISG+++K E + AL K+ R + P ++
Sbjct: 238 -GHMDAAQLAFDGMPTKSEVSWNALISGHARKGE-GEHALHLLWKMQRKNFQPTHFTYSS 295
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
V+SAC+++ GK +HA IK ++ + N L+ MY+K G+++DA+R+FDR+ +
Sbjct: 296 VLSACASIGALEQGKWVHAHMIKSGLKLIAF-IGNTLLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+M+ G AQHG+G E L FE ML I P I+F+ VL+AC+H+G + EG YF
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF 414
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------------- 503
+MK + EP+ HY +DLLGR G L AER I MP P +
Sbjct: 415 ELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473
Query: 504 --IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
+ + AA +L+P ++ P ++L+NIYA++G+W +VA +R++M++ GV+K+P SW+E
Sbjct: 474 MELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHH 609
++ +H+FVA D +HP IKEI EE+S K+K+ GYVPD +E++L +H
Sbjct: 534 IENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYH 593
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEKLA+AF LL+T G PI + KN+R+CGDCH AIKF+S + REI VRDT RFH F+DG
Sbjct: 594 SEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 162/290 (55%), Gaps = 13/290 (4%)
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
GL AL L Q SL ++Y+ +L T L + G HAHL+ S F N +
Sbjct: 71 GLYALDLIQRG-SLVPDYNLYS--KLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127
Query: 272 LI-DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
+I ++YAKC G + D ++F+E+P D+V W +I+G+SQ D AL F ++ R+G+
Sbjct: 128 IIVNMYAKC-GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRD-ALLLFPQMLRLGF 185
Query: 331 HPDDCSFVCVISACSN---LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
P+ + ++ A + L P G Q+HA +K +S+ + V +ALV MY++CG+++
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDP--GTQLHAFCLKYGYQSS-VYVGSALVDMYARCGHMDA 242
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A+ FD MP + VS N++I+G+A+ G G AL L M N PT+ T+ SVLSACA
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACAS 302
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + +G+ + M G + + ++D+ +AG + DA+R+ + +
Sbjct: 303 IGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL 351
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 36/308 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +LK L G LHA LK S Y+ + + +Y++CG + AA AF+
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+N L++ +AR+ G+ E AL L
Sbjct: 251 PTKSEVSWNALISGHARK-------------------------------GEGEHALHLLW 279
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ K F FT S +++ AS L K +H I G A + N+LL Y++ G
Sbjct: 280 KMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+AKRVF + + D VSWN+M+ QH G E L F++M+ + + + + +L
Sbjct: 340 SIDDAKRVFDRLVK-PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVL 398
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
TA + L GL + + K + +DL + G + + E+P +P
Sbjct: 399 TACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRV-GLLDRAERFIREMPIEPT 457
Query: 298 LVLWNTMI 305
+W ++
Sbjct: 458 AAVWGALL 465
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 311 KEEYSDQALGCF--KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
++ SD G + + R PD + ++ C+ L G+ +HA + N
Sbjct: 62 RKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDN 121
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + N +V MY+KCG L+DARR+FD MP + V+ ++IAG++Q+ +AL LF ML
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGK 486
P + T S+L A + G + + +K +G++ S ++D+ R G
Sbjct: 182 RLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK--YGYQSSVYVGSALVDMYARCGH 239
Query: 487 LTDAERLIEAMP 498
+ A+ + MP
Sbjct: 240 MDAAQLAFDGMP 251
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 33/212 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL C L GK +HA +K+ + A++ N + +Y+K G + A F+
Sbjct: 292 TYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFD-- 349
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ +PD+VS+NT+++ A G + L F+
Sbjct: 350 -----------------------------RLVKPDVVSWNTMLTGCAQHGLGKETLDRFE 380
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN--SLLTCYSRNG 178
M + + + ++TA S++ L + L+ + + V + + + R G
Sbjct: 381 QMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVG 440
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
LD A+R EM W +++ A H+
Sbjct: 441 LLDRAERFIREMPIEPTAAVWGALLGACRMHK 472
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/714 (34%), Positives = 390/714 (54%), Gaps = 72/714 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C ++ G+ +H + + + Y+S + Y+KCGCL
Sbjct: 121 TFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLD--------- 171
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA-DCGDTESALSLF 119
A+++FD++ + D+V++N++IS ++ G + L
Sbjct: 172 ----------------------DAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLL 209
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + + T+ G++ A + N+L K++H + GF V +L Y +
Sbjct: 210 VQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKC 268
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ---LGLDMYTL 234
+D A+R+F MG +K+EV+W++MV AY EAL+LF +++ L+ + L TL
Sbjct: 269 QCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTL 328
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A+++ +L DL G H + IKSGF + +G+ L+ +YAKC G + M+ F E+
Sbjct: 329 ATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC-GIINGAMRFFNEMD 387
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
D V + +ISGY Q S++ L F ++ G +P+ + V+ AC++L+ G
Sbjct: 388 LRDAVSFTAIISGYVQNGN-SEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGS 446
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
H I ++ + + NAL+ MY+KCG ++ AR++FDRM + VS N+MI Y H
Sbjct: 447 CSHCYAIICGFTADTM-ICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIH 505
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
GIG+EAL LF+ M + P ++TF+ ++SAC+H+G VAEG+ +F+ M FG P EH
Sbjct: 506 GIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEH 565
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y+CM+DLL RAG + IE MP P + + +L
Sbjct: 566 YACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLG 625
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GS 575
P + +V+L+N+Y+A G+W++ A +R +++G +K PG SWIE+ +H F+ S
Sbjct: 626 PESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRS 685
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTS 623
HP + +I N L+E+ +MK+ GY +KE+ L++HSEKLA+AFG+LS S
Sbjct: 686 HPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLS 745
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I+V KNLR+CGDCH AIKFIS + R+ITVRD RFH FKDG C+CGD+W
Sbjct: 746 PDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 231/505 (45%), Gaps = 44/505 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L++C+ + L GK +H LK CL H N T
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLK---------------------CLHRTHET-NLTNFDV 52
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ--PDLVSYNTLISAYADCGDTESALSLFKDM 122
F V L +L+IA R +FD++P ++V +N LI AYA G E A+ L+ M
Sbjct: 53 PFEKLVDLYIACSELKIA--RHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM 110
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ FT ++ A S +++HC + V+ +L+ Y++ G L
Sbjct: 111 LGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCL 170
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D+AK VF +M + +D V+WNSM+ + H + + + + + T+ +L A
Sbjct: 171 DDAKEVFDKMHK-RDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPA 229
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ L G + H ++ GF + +G+G++D+Y KC + ++F+ + + V
Sbjct: 230 VAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQC-IDYARRIFDMMGIVKNEV 288
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD------CSFVCVISACSNLSP-SLG 352
W+ M+ Y ++ +AL F +L + DD + VI C+NL+ S G
Sbjct: 289 TWSAMVGAYVVC-DFMREALELFCQLLML---KDDVIVLSAVTLATVIRVCANLTDLSTG 344
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+H IK + + V N L++MY+KCG + A R F+ M + VS ++I+GY Q
Sbjct: 345 TCLHCYAIKSGFVLD-LMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQ 403
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+G E LR+F M + I P T SVL ACAH + G + GF +
Sbjct: 404 NGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHC-YAIICGFTADTM 462
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + GK+ A ++ + M
Sbjct: 463 ICNALIDMYAKCGKIDTARKVFDRM 487
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/769 (33%), Positives = 398/769 (51%), Gaps = 112/769 (14%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+++HA + + + N + +Y K + A F + + + + L+ AY
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 78 QLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ R++F+ P D V YN +I+ YA GD SAL LF+ MR F D FT +
Sbjct: 92 LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151
Query: 136 GLITA---SSNNLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCYSRNG--------FLDEA 183
+++A N Q+HC + G +S V N+LL+ Y + + A
Sbjct: 152 SVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSA 211
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQH------REGLEA---------------------- 215
+++F EM + +DE++W +M+ Y ++ RE EA
Sbjct: 212 RKLFDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 216 ---LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH----I 268
L L ++M L + D T +I++A ++ G Q HA+++K+ + N +
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSV 330
Query: 269 GSGLIDLYAKC------------------------------SGDMRDCMKVFEEIPQPDL 298
+ LI LY K +G M + FEE+P +L
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ MISG +Q + D+ L FK++ G+ P D +F ++ACS L G+Q+HA
Sbjct: 391 LTLTVMISGLAQNG-FGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ + S+ +SV NA+++MY+KCG +E A +F MP + VS NSMIA QHG G+
Sbjct: 450 QLVHLGYESS-LSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGV 508
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A+ LF+ ML+ + P ITF++VL+AC+H G V +G+ YF+ M + +G P +HY+ M
Sbjct: 509 KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARM 568
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DL RAG + A +I++MP PG+ + ++AA +L P N
Sbjct: 569 VDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+NIYA G+W +VA +R+LMRD+ V+K+P SWIEV+ ++HVF+ +D HP +
Sbjct: 629 GTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVL 688
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
++ YLE++ +MK+ GY+PD KE L HSEKLAV FG++ +
Sbjct: 689 SVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATV 748
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KN+RICGDCHNA KF+S +A REI VRD RFH FK+G CSC DYW
Sbjct: 749 RVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 32/326 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVP---FSAYLSNHFILLYSKCGCLSAAHHA 56
T+ ++ C GK +HA LKN L P F +SN I LY K + A
Sbjct: 291 TYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKI 350
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F N+ ++N +L+ Y R+ A+ F+++P +L++ +IS A G + L
Sbjct: 351 FYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGL 410
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
LFK MR F+ F +G +TA S L +QLH ++ G++ SV N++++ Y
Sbjct: 411 KLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMY 470
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G ++ A+ VF M + D VSWNSM+ A GQH G++A++LF +M+ + D T
Sbjct: 471 AKCGVVEAAESVFVTMPSV-DLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITF 529
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGS-----------GLIDLYAKCSGD 282
++LTA + HA L++ G H NS + S ++DL+ + +G
Sbjct: 530 LTVLTACS-----------HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCR-AGM 577
Query: 283 MRDCMKVFEEIP-QPDLVLWNTMISG 307
V + +P +P +W +++G
Sbjct: 578 FSYARIVIDSMPSKPGAPVWEALLAG 603
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/654 (37%), Positives = 373/654 (57%), Gaps = 44/654 (6%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H NVF+ L+ AY R R+A A ++FD++P+ D+ ++N ++S A++L
Sbjct: 99 HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGR 158
Query: 122 MREKRFDTDGFTLSGL----ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + D TLS + + L L+ +H A+ G V N+L+ Y +
Sbjct: 159 MVGEGVAGDAVTLSSVLPMCVVLGDRALALV--MHVYAVKHGLSGELFVCNALIDVYGKL 216
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L EA VF M ++D V+WNS++ A Q + A++LF M+ + D+ TL S+
Sbjct: 217 GMLTEAHWVFGGMA-LRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSL 275
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+A D +G H ++ + G+ I G+ ++D+YAK S + KVF+ +P
Sbjct: 276 ASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMS-KIDAAQKVFDNLPDR 334
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D+V WNT+I+GY Q +++A+ + + N G P +FV V+ A S L G +
Sbjct: 335 DVVSWNTLITGYMQNG-LANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMR 393
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HAL+IK + + + V L+ +Y+KCG L +A LF+ MP +T N++IAG HG
Sbjct: 394 MHALSIKTGLNLD-VYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHG 452
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G +AL LF M + I P ++TFVS+L+AC+H G V +G+ +F +M+ ++G P +HY
Sbjct: 453 HGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHY 512
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEP 517
+CM+D+LGRAG+L +A I++MP P S + A+ + +L+P
Sbjct: 513 TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 572
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA--EDGS 575
N YV+++N+YA GKW+ V +R L+R + +QK PG+S +EVK + VF + +
Sbjct: 573 ENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEP 632
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
HP +EI L ++ KMK AGYVPD KE+ L +HSE+LA+AFG+++T
Sbjct: 633 HPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTP 692
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G P+ + KNLR+CGDCH+A K+IS I REI VRD RFH FKDG CSCGD+W
Sbjct: 693 PGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP---DDCSFVCVISACSNLSPSLG 352
P L+L N++I+ +S+ + G HP D +F ++ A P+
Sbjct: 30 PPLLLVNSLIAAFSRAALPRLALP--LLRRLLAGAHPLRPDSFTFPPLVRAAPG--PASA 85
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
Q+HA +++ + + + +LV Y + G + +A R+FD MPE + + N+M++G +
Sbjct: 86 AQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCR 145
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP--E 470
+ +A+ L M+ + +T SVL C V G + +++ ++ +
Sbjct: 146 NTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMC-----VVLGDRALALVMHVYAVKHGLS 200
Query: 471 GEHYSC--MIDLLGRAGKLTDAERLIEAM 497
GE + C +ID+ G+ G LT+A + M
Sbjct: 201 GELFVCNALIDVYGKLGMLTEAHWVFGGM 229
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL L G +HAL +K + Y++ I LY+KCG L A F
Sbjct: 374 TFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHM 433
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ +N ++A A A LF Q+ Q PD V++ +L++A + G +
Sbjct: 434 PRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGR 493
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F M+ T+ G++ + + C++ L R
Sbjct: 494 SFFDLMQ---------TVYGIVPIAKHYTCMVDML-----------------------GR 521
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G LDEA M D W +++ A
Sbjct: 522 AGQLDEAFEFIQSMPIKPDSAVWGALLGA 550
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/647 (37%), Positives = 376/647 (58%), Gaps = 54/647 (8%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ L+ AR +ASAR++FD + + +V + LIS Y E A+ +F D E F+
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFE 251
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF---LDEA 183
D +T+S +I+A + ++ L QLH LA+ GF A V+ L+ Y+++ +D A
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYA 311
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLE---ALQLFQEMVSLQLGLDMYTLASILTA 240
+VF M + D +SW +++ Y Q G++ + LF EM++ + + T +SIL A
Sbjct: 312 NKVFERMRK-NDVISWTALISGYVQ--SGVQENKVMVLFGEMLNESIKPNHITYSSILKA 368
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
++ D G Q HAH+IKS +G+ L+ +YA+ SG M + +VF ++ +
Sbjct: 369 CANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAE-SGCMEEARRVFNQLYE----- 422
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+MIS + E D L ++ R+ +F +ISA +++ + G+Q+HA+T
Sbjct: 423 -RSMISCIT---EGRDAPLD--HRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMT 476
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K S+R V+N+LV+MYS+CG LEDA R F+ + + N +S SMI+G A+HG A
Sbjct: 477 LKAGFGSDRF-VSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF M+ T + P ++T+++VLSAC+H G V EG++YF M+ G P EHY+CM+D
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
LL R+G + +A I MP ++ K AA + ++LEP + P
Sbjct: 596 LLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAP 655
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA +G W+EVA IR MRD + K+ G SW+EV+ H F A D SHP ++I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+ + ++K GYVPD KE+ L+ HSEK+AVAFGL++TS +PI +
Sbjct: 716 YGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH+AIK++S REI +RD+ RFH KDG CSCG+YW
Sbjct: 776 FKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 239/499 (47%), Gaps = 75/499 (15%)
Query: 14 DLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
DL G++LH L+ +L+ A ++N + LYS+CG
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGA----------------------- 99
Query: 73 AAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
+ASAR +FD + D+VS+ + S A G +L L +M E +
Sbjct: 100 --------VASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNA 151
Query: 132 FTLSGLITASSNNLCLIKQLHCLAIYC-----------GFDHYASVNNSLLTCYSRNGFL 180
+TL + A C +L+CL G D +V ++L+ +RNG L
Sbjct: 152 YTLCAVAHA-----CFPHELYCLVGGVVLGLVHKMGLWGTD--IAVGSALIDMLARNGDL 204
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A++VF + E K V W ++ Y Q EA+++F + + D YT++S+++A
Sbjct: 205 ASARKVFDGLIE-KTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISA 263
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEIPQPDL 298
T L + GLQ H+ ++ GF ++ + GL+D+YAK + + M KVFE + + D+
Sbjct: 264 CTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDV 323
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W +ISGY Q ++ + F ++ P+ ++ ++ AC+N+S G+Q+HA
Sbjct: 324 ISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHA 383
Query: 358 LTIKIEIRSNRI---SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS-LNSMIAGYAQH 413
IK SN+ +V NALV+MY++ G +E+ARR+F+++ E + +S + H
Sbjct: 384 HVIK----SNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDH 439
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
IG ++ ++ TF S++SA A G + +GQ+ +M GF +
Sbjct: 440 RIG-----------RMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKA-GFGSDRFV 487
Query: 474 YSCMIDLLGRAGKLTDAER 492
+ ++ + R G L DA R
Sbjct: 488 SNSLVSMYSRCGYLEDACR 506
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 160/386 (41%), Gaps = 61/386 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C D +G+ +HA +K+ + + N + +Y++ GC+ A FNQ
Sbjct: 361 TYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Query: 61 QHANVFSFNVLLAAYARQLRIASARQ--LFDQIPQPDL----VSYNTLISAYADCGDTES 114
++ S I R L +I + D+ ++ +LISA A G
Sbjct: 421 YERSMISC------------ITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTK 468
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
L + F +D F SN+L ++ Y
Sbjct: 469 GQQLHAMTLKAGFGSDRFV--------SNSL-------------------------VSMY 495
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
SR G+L++A R F E+ + ++ +SW SM+ +H AL LF +M+ + + T
Sbjct: 496 SRCGYLEDACRSFNELKD-RNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
++L+A + + + G ++ + + G + ++DL A+ SG +++ ++ E+
Sbjct: 555 IAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLAR-SGLVKEALEFINEM 613
Query: 294 P-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
P + D ++W T++ + + +G N + P D + ++ SNL G
Sbjct: 614 PLKADALVWKTLLGAC---RSHDNIEVGEIAAKNVIELEPRDPAPYVLL---SNLYADAG 667
Query: 353 KQIHALTIKIEIRSNRISVNNALVAM 378
I+ +R N ++ L M
Sbjct: 668 LWDEVARIRSAMRDNNLNKETGLSWM 693
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 22/296 (7%)
Query: 246 DLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVLWNT 303
DL G H L++ +++ + + L+ LY++C G + VF+ + D+V W
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRC-GAVASARNVFDGMRGLRDIVSWTA 121
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIK 361
M S + + ++L ++ G P+ + V AC L +G + L K
Sbjct: 122 MASCLA-RNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHK 180
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ + I+V +AL+ M ++ G+L AR++FD + E V +I+ Y Q EA+
Sbjct: 181 MGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+F LE P T S++SAC G V G + S+ M GF + ++D+
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRM-GFASDACVSCGLVDMY 299
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
++ + +AM + A F ++ ++ + + L + Y SG E
Sbjct: 300 AKSN-------IEQAMDY--------ANKVFERMRKNDVISWTALISGYVQSGVQE 340
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/653 (36%), Positives = 360/653 (55%), Gaps = 66/653 (10%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ F N L+ YA+ S ++FD++ + + V++N++ISA A G AL LF M
Sbjct: 208 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 267
Query: 123 REKR--FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+E D FT + L+T A+ N +Q+H I V L+ YS G
Sbjct: 268 QESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECG 327
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ AK +F M E ++ SWNSM+ Y Q+ E EAL+LF++M + D ++L+S+L
Sbjct: 328 RLNYAKEIFNRMAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSML 386
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD- 297
++ SL D G + H ++++ + + L+D+YAKC G M KV+++ + D
Sbjct: 387 SSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKC-GSMDYAWKVYDQTIKKDR 445
Query: 298 -LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
LWN++++GY+ K ++ F ++ D + V ++
Sbjct: 446 NTALWNSILAGYANK-GLKKESFNHFLEMLESDIEYDVLTMVTIV--------------- 489
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
N + + ALV MYSKCG + AR +FD M N VS N+MI+GY++HG
Sbjct: 490 ----------NLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCS 539
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL L+E M + + P +TF+++LSAC+HTG V EG + F+ M++ + E + EHY+C
Sbjct: 540 KEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 599
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
M+DLLGRAG+L DA+ +E MP P + AA +L+P N
Sbjct: 600 MVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQN 659
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
PYV+++NIYAA+G+W+EV IR++M+ +GV+K PG SWIE+ ++ +F A +HP
Sbjct: 660 PGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKT 719
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKE---------------KRLVHHSEKLAVAFGLLSTSY 624
+EI+N L ++ + K GY+PD + L+ HSE+LA++ GL+S
Sbjct: 720 EEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPK 779
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLRICGDCH A KFIS I GR I RDT RFH F++G+CSCGDYW
Sbjct: 780 KSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 218/415 (52%), Gaps = 28/415 (6%)
Query: 128 DTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE--- 182
D + S LI SN+ K +H I G++ A + +L Y+R+G LD+
Sbjct: 68 DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+++F EM E ++ +WN+M++AY + + +EA +F M+ + + D +T AS L
Sbjct: 128 ARKLFEEMPE-RNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCG 186
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+L GG Q H+ LI GF ++ +G+ LID+YAKC D C+KVF+E+ + + V WN
Sbjct: 187 ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCD-DEESCLKVFDEMGERNQVTWN 245
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRV--GYHPDDCSFVCVISACSN-LSPSLGKQIHALT 359
++IS +Q ++D AL F ++ G PD +F +++ C+N + + G+QIHA
Sbjct: 246 SIISAEAQFGHFND-ALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I+ I N I V LV MYS+CG L A+ +F+RM E N S NSMI GY Q+G EA
Sbjct: 305 IRANITKN-IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LRLF+ M I P + S+LS+C +G++ + + E EG ++D
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN-TMEEEGILQVVLVD 422
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIAL---------------KAANHFLQLEPSN 519
+ + G + A ++ + + AL ++ NHFL++ S+
Sbjct: 423 MYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESD 477
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 229/454 (50%), Gaps = 49/454 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +++ C+ GKS+H + N AYL ++LY++ GCL
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD--------- 124
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ AR+LF+++P+ +L ++NT+I AYA D A +F
Sbjct: 125 -------------------LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDR 165
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCY 174
M + D FT AS+ +C KQ+H I CGF V N+L+ Y
Sbjct: 166 MLKIGVCPDNFTF-----ASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMY 220
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMY 232
++ + +VF EMGE +++V+WNS++ A Q +AL LF M + G+ D +
Sbjct: 221 AKCDDEESCLKVFDEMGE-RNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQF 279
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T ++LT + + G Q HAHLI++ +N + + L+ +Y++C G + ++F
Sbjct: 280 TFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSEC-GRLNYAKEIFNR 338
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL- 351
+ + + WN+MI GY Q E + +AL FK++ G PD S ++S+C +LS S
Sbjct: 339 MAERNAYSWNSMIEGYQQNGE-TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK 397
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM--PEHNTVSLNSMIAG 409
G+++H ++ + I + LV MY+KCG+++ A +++D+ + NT NS++AG
Sbjct: 398 GRELHNFIVRNTMEEEGI-LQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG 456
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
YA G+ E+ F MLE++I +T V++++
Sbjct: 457 YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 490
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 202/472 (42%), Gaps = 74/472 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C +R+ G+ +HA ++ + + + + +YS+CG L+ A FN+
Sbjct: 280 TFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM 339
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N +S+N ++ Y + A +LF Q+ +PD S ++++S+ D++
Sbjct: 340 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG- 398
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
++LH + + + L+ Y++
Sbjct: 399 --------------------------------RELHNFIVRNTMEEEGILQVVLVDMYAK 426
Query: 177 NGFLDEAKRVFYE-MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G +D A +V+ + + + ++ WNS++ Y E+ F EM+ + D+ T+
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 486
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+I+ + + L+D+Y+KC G + VF+ +
Sbjct: 487 TIVNLLV-------------------------LETALVDMYSKC-GAITKARTVFDNMNG 520
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
++V WN MISGYS K S +AL ++++ + G +P++ +F+ ++SACS+ + + + +
Sbjct: 521 KNIVSWNAMISGYS-KHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH-TGLVEEGL 578
Query: 356 HALT-----IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
T IE ++ + +V + + G LEDA+ ++MP VS + G
Sbjct: 579 RIFTSMQEDYNIEAKAEHYT---CMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 635
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
+ M+ RL L P +V + + A G+ E + MMK
Sbjct: 636 CRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMK 687
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/660 (36%), Positives = 368/660 (55%), Gaps = 70/660 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-TDGFTLSGLITASS 142
A+Q+FDQIP P+L ++NTLI AYA + +L +F M + D D FT LI A+S
Sbjct: 88 AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147
Query: 143 N--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
L K H + I + NSL+ Y++ G L RVF + +D VSWN
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPR-RDVVSWN 206
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
SM+ A+ Q EAL+LFQEM + + + T+ +L+A D G H+++ ++
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN 266
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
++ + + ++D+Y KC G + D ++F+++P+ D+V W TM+ GY++ EY D A G
Sbjct: 267 RIGESLTLSNAMLDMYTKC-GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEY-DAAQG 324
Query: 321 CFKKL---------------NRVG--------YH---------PDDCSFVCVISACSNLS 348
F + + G +H PD+ + V +SAC+ L
Sbjct: 325 IFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLG 384
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG IH K ++ N + +L+ MY KCG+L+ A +F + + ++MI
Sbjct: 385 AMDLGGWIHVYIKKQGMKLN-CHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMI 443
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
AG A HG G +A+ LF M E + P +TF ++L AC+H G V EG+ +F+ M+ ++G
Sbjct: 444 AGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGV 503
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAAN 510
P +HY+CM+D+LGRAG L +A LIE MP P + +A +A +
Sbjct: 504 LPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACS 563
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
++LEP N YV+L+NIYA +GKW+ V+ +R+LMRD G++K+PG S IEV +H F+
Sbjct: 564 QLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFL 623
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAF 617
D SHP K+I+ L+E+ +++ GYVP+ KE+ L HSEKLA+AF
Sbjct: 624 VGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAF 683
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST +PI ++KNLR+CGDCH+ K +S + REI +RD YRFH F++G CSC DYW
Sbjct: 684 GLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 213/442 (48%), Gaps = 62/442 (14%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ 150
IP P LVS L +++ ++++L D R+ + TLS + S +KQ
Sbjct: 3 IPNPCLVS---LPRSHSLPTPNPNSITLNND----RYFANHPTLSLIDQCSETKQ--LKQ 53
Query: 151 LHCLAIYCG--FDHYASVNNSLLTCYSRNGF--LDEAKRVFYEMGEIKDEVSWNSMVVAY 206
+H + G FD +++ + L+T + + F LD A++VF ++ + +WN+++ AY
Sbjct: 54 IHAQMLRTGLFFDPFSA--SRLITAAALSPFPSLDYAQQVFDQIPH-PNLYTWNTLIRAY 110
Query: 207 GQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
++L +F M+ D +T ++ A + LE+L G FH +IK +
Sbjct: 111 ASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSD 170
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
I + LI YAKC G++ +VF IP+ D+V WN+MI+ + Q ++AL F+++
Sbjct: 171 VFILNSLIHFYAKC-GELGLGYRVFVNIPRRDVVSWNSMITAFVQGG-CPEEALELFQEM 228
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI----SVNNALVAMYS 380
P+ + V V+SAC+ S G+ +H+ I NRI +++NA++ MY+
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSY-----IERNRIGESLTLSNAMLDMYT 283
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYA----------------------------- 411
KCG++EDA+RLFD+MPE + VS +M+ GYA
Sbjct: 284 KCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISA 343
Query: 412 --QHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Q G EAL LF E L P +T VS LSACA G + G +K G +
Sbjct: 344 YEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQ-GMK 402
Query: 469 PEGEHYSCMIDLLGRAGKLTDA 490
+ +ID+ + G L A
Sbjct: 403 LNCHLTTSLIDMYCKCGDLQKA 424
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 198/446 (44%), Gaps = 73/446 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K +L TGK+ H + +K L+ ++ N I Y+KCG L + F
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S +N++I+A+ G E AL LF+
Sbjct: 198 PRRDVVS-------------------------------WNSMITAFVQGGCPEEALELFQ 226
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + +G T+ G+++A + ++ + +H +++N++L Y++ G
Sbjct: 227 EMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCG 286
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVV-------------------------------AYG 207
+++AKR+F +M E KD VSW +M+V AY
Sbjct: 287 SVEDAKRLFDKMPE-KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYE 345
Query: 208 QHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q + EAL+LF E+ +S D TL S L+A L + G H ++ K G N
Sbjct: 346 QCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNC 405
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
H+ + LID+Y KC GD++ + VF + + D+ +W+ MI+G + D A+ F K+
Sbjct: 406 HLTTSLIDMYCKC-GDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKD-AIALFSKMQ 463
Query: 327 RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN---ALVAMYSKCG 383
P+ +F ++ ACS++ L ++ ++E+ + +V + + G
Sbjct: 464 EDKVKPNAVTFTNILCACSHV--GLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAG 521
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAG 409
LE+A L ++MP S+ + G
Sbjct: 522 LLEEAVELIEKMPMAPAASVWGALLG 547
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HA ++++G + S LI A D +VF++IP P+L WNT+I Y+
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRI 369
L + L++ PD +F +I A S L GK H + IK+ + S+ +
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSD-V 171
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+ N+L+ Y+KCG L R+F +P + VS NSMI + Q G EAL LF+ M
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS---CMIDLLGRAGK 486
N+ P IT V VLSACA G+ S ++ GE + M+D+ + G
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIER----NRIGESLTLSNAMLDMYTKCGS 287
Query: 487 LTDAERLIEAMP 498
+ DA+RL + MP
Sbjct: 288 VEDAKRLFDKMP 299
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/709 (34%), Positives = 379/709 (53%), Gaps = 101/709 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C L TGK +H +K + + +++ + +YSKC CL A + F
Sbjct: 136 TLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF--- 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F + + V + +++ YA G++ A+ FK
Sbjct: 193 ---------------------------FSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFK 225
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR + +++ FT ++TA S + +Q+H I+ GF V ++L+ Y++ G
Sbjct: 226 EMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCG 285
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+ + M EI D V WNSM+V H EAL LF +M + + +D +T S+L
Sbjct: 286 DLASARMILDTM-EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVL 344
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ S ++L G H+ IK+GF + + L+D+YAK G++ + VF +I D+
Sbjct: 345 KSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAK-QGNLSCALDVFNKILDKDV 403
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W ++++GY + ++AL F + D CV SAC+ L+ G+Q+HA
Sbjct: 404 ISWTSLVTGYVHNG-FHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHA 462
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK S +S N+L+ MY+KCG LEDA R+ D M N +S ++I GY
Sbjct: 463 NFIKSSAGS-LLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGY------- 514
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A G V GQ YF M+ ++G +P + Y+CM
Sbjct: 515 ----------------------------AQNGLVETGQSYFESMEKVYGIKPASDRYACM 546
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNA 520
IDLLGRAGK+ +AE L+ M P G++ L +A + ++LEPSN+
Sbjct: 547 IDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNS 606
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+PYV+L+N+++ +G+WE+ A IRR M+ G+ ++PG+SWIE+K Q+H F++ED SHP+
Sbjct: 607 LPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAA 666
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI++ ++EM +K+AG+VPD KE+ L +HSEKLAVAFGLL+ + G PI
Sbjct: 667 EIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPI 726
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+A+K+IS+I R I +RD FH F +G+CSCGD+W
Sbjct: 727 RIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 256/487 (52%), Gaps = 19/487 (3%)
Query: 22 HALYLK---NLVPFSAYL-SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
H L+++ + +S+ L SN + SK G + A F+Q + + +++N++++AYA
Sbjct: 21 HPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYAN 80
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
+ AR+LF++ P + +++++L+S Y G L F M +TL +
Sbjct: 81 LGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSV 140
Query: 138 ITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
+ A S L L+ K +HC AI + V L+ YS+ L EA+ +F+ + + K
Sbjct: 141 LRACST-LSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRK 199
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+ V W +M+ Y Q+ E L+A+Q F+EM + + + +T SILTA TS+ G Q H
Sbjct: 200 NYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVH 259
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+I SGF N ++ S L+D+YAKC GD+ + + + D+V WN+MI G Y
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKC-GDLASARMILDTMEIDDVVCWNSMIVG-CVTHGY 317
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCV---ISACSNLSPSLGKQIHALTIKIEIRSNRISV 371
++AL F K++ DD ++ V +++C NL +G+ +H+LTIK + + +V
Sbjct: 318 MEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNL--KIGESVHSLTIKTGFDACK-TV 374
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+NALV MY+K GNL A +F+++ + + +S S++ GY +G +AL+LF M +
Sbjct: 375 SNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARV 434
Query: 432 PPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
V SACA + G Q + + +K G E+ +I + + G L DA
Sbjct: 435 DLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAEN--SLITMYAKCGCLEDA 492
Query: 491 ERLIEAM 497
R+ ++M
Sbjct: 493 IRVXDSM 499
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/671 (36%), Positives = 377/671 (56%), Gaps = 58/671 (8%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H FS N L+A YA+ R+ A+ L DLV++N++IS+++ AL +
Sbjct: 147 HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRL 206
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNG 178
M + DG T + ++ A S + L K++H A+ + V ++L+ Y G
Sbjct: 207 MVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCG 266
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASI 237
++ + VF + + K + WN+M+ Y Q +AL LF EM + L + T++SI
Sbjct: 267 QVESGRLVFDSVLDRKIGL-WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSI 325
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ A+ E + H ++IK G N ++ + LID+Y++ GD++ ++F+ + D
Sbjct: 326 VPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRM-GDIKTSKRIFDSMEDRD 384
Query: 298 LVLWNTMISGYSQKEEYSDQAL---------------GCFKKLNRVGYHPDDCSFVCVIS 342
+V WNT+I+ Y SD L G + +V + P+ + + V+
Sbjct: 385 IVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLP 444
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
C++LS + GK+IHA I+ + +++++V +ALV MY+KCG L ARR+FD+MP N +
Sbjct: 445 GCASLSALAKGKEIHAYAIR-NLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVI 503
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETN-----IPPTNITFVSVLSACAHTGKVAEGQK 456
+ N +I Y HG G E+L LFE M+ + PT +TF+++ ++C+H+G V EG
Sbjct: 504 TWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLS 563
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP------------------ 498
F MK+ G EP +HY+C++DL+GRAGK+ +A L+ MP
Sbjct: 564 LFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRI 623
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
++ I AA + LQL+P A YV+L+NIY+++G W++ +RR M+ GV+K+PG S
Sbjct: 624 YHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCS 683
Query: 559 WIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRL 606
WIE ++H F+A D SHP +++H++LE +S ++K+ GYVPD KE L
Sbjct: 684 WIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETIL 743
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
HSEKLA+AFG+L+T G I V KNLR+C DCH A KFIS I REI +RD RFH F
Sbjct: 744 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHF 803
Query: 667 KDGRCSCGDYW 677
KDG CSCGDYW
Sbjct: 804 KDGTCSCGDYW 814
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 260/529 (49%), Gaps = 71/529 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAY-LSNHFILLYSKCGCLSAAHHAFN 58
F VLK G ++L GK +HA K FS+ + N + +Y KCG L A+
Sbjct: 12 AFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY---- 67
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
++FD+I + D VS+N++ISA + E A+
Sbjct: 68 ---------------------------KVFDRITERDQVSWNSIISALCRFEEWEVAIKA 100
Query: 119 FKDMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASV-NNSLLT 172
F+ M + F+ FTL + A SN L L KQ+H G H+ + NN+L+
Sbjct: 101 FRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG--HWRTFSNNALMA 158
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y++ G LD+AK + + E +D V+WNSM+ ++ Q+ +EAL + MV + D
Sbjct: 159 MYAKLGRLDDAKSLLV-LFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGV 217
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T AS+L A + L+ L G + HA+ +++ +NS +GS L+D+Y C G + VF+
Sbjct: 218 TFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNC-GQVESGRLVFD 276
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISA---CSNL 347
+ + LWN MI+GY+Q E+ ++AL F ++ G + + + ++ A C +
Sbjct: 277 SVLDRKIGLWNAMIAGYAQS-EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGI 335
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
S G IH IK + +NR + NAL+ MYS+ G+++ ++R+FD M + + VS N++I
Sbjct: 336 SRKEG--IHGYVIKRGLETNRY-LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTII 392
Query: 408 AGYAQHGIGMEALRLFEWML--------------ETNIP--PTNITFVSVLSACAHTGKV 451
Y G +AL L M E +P P +IT ++VL CA +
Sbjct: 393 TSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSAL 452
Query: 452 AEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
A+G++ + ++++ + S ++D+ + G L A R+ + MP
Sbjct: 453 AKGKEIHAYAIRNLLASQVTVG--SALVDMYAKCGCLNLARRVFDQMPI 499
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 10/241 (4%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH--IGSGLIDLYAKC 279
M+ D + ++L A +++L G Q HAH+ K G+ S I + L+++Y KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + D KVF+ I + D V WN++IS + EE+ + A+ F+ + G+ P + V
Sbjct: 61 GG-LGDAYKVFDRITERDQVSWNSIISALCRFEEW-EVAIKAFRLMLMEGFEPSSFTLVS 118
Query: 340 VISACSNLSPS----LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
+ ACSNL LGKQIH + R NNAL+AMY+K G L+DA+ L
Sbjct: 119 MALACSNLRKRDGLWLGKQIHGCCFRKG--HWRTFSNNALMAMYAKLGRLDDAKSLLVLF 176
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ + V+ NSMI+ ++Q+ MEAL M+ + P +TF SVL AC+H + G+
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236
Query: 456 K 456
+
Sbjct: 237 E 237
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS-NRISVNNALVAMYSKCGNLE 386
G+ PD+ +F V+ A + + LGKQIHA K S + ++++N LV MY KCG L
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
DA ++FDR+ E + VS NS+I+ + A++ F ML P++ T VS+ AC+
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHY-----SCMIDLLGRAGKLTDAERLI 494
+ K + + K + G H+ + ++ + + G+L DA+ L+
Sbjct: 125 NLRK----RDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLL 173
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
+ +H +K + + YL N I +YS+ G + + F+ + ++ S+N ++ +Y
Sbjct: 339 EGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVIC 398
Query: 79 LRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
R + A L ++ + + +Y+ GD + D ++ F + TL +
Sbjct: 399 GRSSDALLLLHEMQRIEEKSTYD---------GD-------YNDEKQVPFKPNSITLMTV 442
Query: 138 IT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ AS + L K++H AI +V ++L+ Y++ G L+ A+RVF +M I++
Sbjct: 443 LPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM-PIRN 501
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVS 224
++WN +++AYG H +G E+L+LF++MV+
Sbjct: 502 VITWNVIIMAYGMHGKGKESLELFEDMVA 530
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +HA ++NL+ + + + +Y+KCGCL+ A F+Q
Sbjct: 438 TLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM 497
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI---------PQPDLVSYNTLISAYADCGD 111
NV ++NV++ AY + + +LF+ + +P V++ L ++ + G
Sbjct: 498 PIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGM 557
Query: 112 TESALSLFKDMREK 125
+ LSLF M+ +
Sbjct: 558 VDEGLSLFHKMKNE 571
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/743 (34%), Positives = 389/743 (52%), Gaps = 116/743 (15%)
Query: 49 CLSAAHHAFNQTQ--HANVFSFNV---------LLAAYARQLRIASAR---QLFDQIPQP 94
CLS++ + +Q + HA + N+ LL+ YA L +++ + L +P P
Sbjct: 8 CLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHP 67
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLH 152
L S+++LI A+A L+ F + R D F L I AS L +QLH
Sbjct: 68 TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127
Query: 153 CLAIYCGF-------------------------------DHYASVNNSLLTCYSRNGFLD 181
A GF D V ++++ YSR G ++
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187
Query: 182 EAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EAK +F EM G + VSWN M+ +G + EA+ +F+ M+ D T++ +L
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVL 247
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A LED+V G Q H ++IK G + + S ++D+Y KC G +++ +VF+E+ + ++
Sbjct: 248 PAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKC-GCVKEMSRVFDEVEEMEI 306
Query: 299 VLWNTMISGYSQK----------EEYSDQ------------------------ALGCFKK 324
N ++G S+ ++ DQ AL F+
Sbjct: 307 GSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRD 366
Query: 325 LNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G P+ + +I AC N+S + GK+IH +++ I + + V +AL+ MY+KCG
Sbjct: 367 MQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDD-VYVGSALIDMYAKCG 425
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
++ ARR FD+M N VS N+++ GYA HG E + +F ML++ P +TF VLS
Sbjct: 426 RIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLS 485
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG- 502
ACA G EG + ++ M + G EP+ EHY+C++ LL R GKL +A +I+ MPF P
Sbjct: 486 ACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDA 545
Query: 503 ----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
S+ AA LEP+N Y++L+NIYA+ G W+E IR +M
Sbjct: 546 CVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVM 605
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------ 600
+ +G++K PG+SWIEV ++H+ +A D SHP +K+I L++++ +MK++GY+P
Sbjct: 606 KSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVL 665
Query: 601 ------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
DKE+ L HSEKLAV GLL+TS G+P+ V+KNLRIC DCH IK IS + GRE
Sbjct: 666 QDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGRE 725
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRDT RFH FKDG CSCGD+W
Sbjct: 726 IYVRDTNRFHHFKDGVCSCGDFW 748
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 180/398 (45%), Gaps = 40/398 (10%)
Query: 133 TLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
LS +++S+ +L +Q H L + + SLL+ Y+ L +
Sbjct: 4 ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63
Query: 193 IKDEV--SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+ S++S++ A+ + L F + L+L D + L S + + SL L G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HA SGF +S + S L +Y KC + D K+F+ +P D+V+W+ MI+GYS+
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCD-RILDARKLFDRMPDRDVVVWSAMIAGYSR 182
Query: 311 -------KEEYS---------------------------DQALGCFKKLNRVGYHPDDCS 336
KE + D+A+G F+ + G+ PD +
Sbjct: 183 LGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGST 242
Query: 337 FVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
CV+ A L +G Q+H IK + S++ V +A++ MY KCG +++ R+FD +
Sbjct: 243 VSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVV-SAMLDMYGKCGCVKEMSRVFDEV 301
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
E SLN+ + G +++G+ AL +F + + +T+ S++++C+ GK E
Sbjct: 302 EEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+ F M+ +G EP +I G L + +
Sbjct: 362 ELFRDMQ-AYGVEPNAVTIPSLIPACGNISALMHGKEI 398
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 148/302 (49%), Gaps = 10/302 (3%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
D+V G +H +K + ++ + + +Y KCGC+ F++ + + S N L
Sbjct: 254 EDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313
Query: 73 AAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+R + +A ++F DQ + ++V++ ++I++ + G AL LF+DM+ +
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE 373
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T+ LI A N L+ K++HC ++ G V ++L+ Y++ G + A+R
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M + + VSWN+++ Y H + E +++F M+ D+ T +L+A
Sbjct: 434 FDKMSAL-NLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGL 492
Query: 247 LVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
G + +++ + G + L+ L ++ G + + + +E+P +PD +W +
Sbjct: 493 TEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRV-GKLEEAYSIIKEMPFEPDACVWGAL 551
Query: 305 IS 306
+S
Sbjct: 552 LS 553
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++ C L+ GK +H L+ + Y+ + I +Y+KCG + A F++
Sbjct: 378 TIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKM 437
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N+ S+N ++ YA + ++F + Q PDLV++ ++SA A G TE
Sbjct: 438 SALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGW 497
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ M E+ I +HYA L+T SR
Sbjct: 498 RCYNSMSEEH----------------------------GIEPKMEHYA----CLVTLLSR 525
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
G L+EA + EM D W +++
Sbjct: 526 VGKLEEAYSIIKEMPFEPDACVWGALL 552
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/630 (36%), Positives = 353/630 (56%), Gaps = 37/630 (5%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I ARQ+FD +P+P + +N +I Y+ + AL ++ +M+ R D FT L+ A
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 141 SS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEV 197
S ++L + + +H GFD V N L+ Y++ L A+ VF + + V
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
SW ++V AY Q+ E +EAL++F +M + + D L S+L AFT L+DL G HA +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+K G + L +YAKC G + +F+++ P+L+LWN MISGY+ K Y+ +
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKC-GQVATAKILFDKMKSPNLILWNAMISGYA-KNGYARE 306
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F ++ PD S ISAC+ + S + ++ + + R + + +++AL+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD-VFISSALI 365
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
M++KCG++E AR +FDR + + V ++MI GY HG EA+ L+ M + P ++
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TF+ +L AC H+G V EG +F+ M D P+ +HY+C+IDLLGRAG L A +I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 497 MPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
MP PG + AA ++PSN YV L+N+YAA+ W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 540 ATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV 599
A +R M+++G+ K G SW+EV+ ++ F D SHP +EI +E + ++K+ G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 600 PDK------------EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFI 647
+K E+ L HSE++A+A+GL+ST G P+ + KNLR C +CH A K I
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 648 SAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
S + REI VRDT RFH FKDG CSCGDYW
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 38/350 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C G L G+ +HA + ++ N I LY+KC
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC------------- 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSL 118
R+ SAR +F+ +P P+ +VS+ ++SAYA G+ AL +
Sbjct: 168 ------------------RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ D L ++ A + +L + +H + G + + SL T Y++
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + AK +F +M + + + WN+M+ Y ++ EA+ +F EM++ + D ++ S
Sbjct: 270 CGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++A + L + ++ +S + + I S LID++AKC G + VF+
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC-GSVEGARLVFDRTLDR 387
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
D+V+W+ MI GY + +A+ ++ + R G HP+D +F+ ++ AC++
Sbjct: 388 DVVVWSAMIVGYGLHGR-AREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/630 (36%), Positives = 353/630 (56%), Gaps = 37/630 (5%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I ARQ+FD +P+P + +N +I Y+ + AL ++ +M+ R D FT L+ A
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 141 SS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEV 197
S ++L + + +H GFD V N L+ Y++ L A+ VF + + V
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
SW ++V AY Q+ E +EAL++F M + + D L S+L AFT L+DL G HA +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+K G + L +YAKC G + +F+++ P+L+LWN MISGY+ K Y+ +
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKC-GQVATAKILFDKMKSPNLILWNAMISGYA-KNGYARE 306
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F ++ PD S ISAC+ + S + ++ + + R + + +++AL+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD-VFISSALI 365
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
M++KCG++E AR +FDR + + V ++MI GY HG EA+ L+ M + P ++
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TF+ +L AC H+G V EG +F++M D P+ +HY+C+IDLLGRAG L A +I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 497 MPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
MP PG + AA ++PSN YV L+N+YAA+ W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 540 ATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV 599
A +R M+++G+ K G SW+EV+ ++ F D SHP +EI +E + ++K+ G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 600 PDK------------EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFI 647
+K E+ L HSE++A+A+GL+ST G P+ + KNLR C +CH A K I
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 648 SAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
S + REI VRDT RFH FKDG CSCGDYW
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 38/350 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C G L G+ +HA + ++ N I LY+KC
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC------------- 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSL 118
R+ SAR +F+ +P P+ +VS+ ++SAYA G+ AL +
Sbjct: 168 ------------------RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ D L ++ A + +L + +H + G + + SL T Y++
Sbjct: 210 FSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + AK +F +M + + + WN+M+ Y ++ EA+ +F EM++ + D ++ S
Sbjct: 270 CGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++A + L + ++ +S + + I S LID++AKC G + VF+
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC-GSVEGARLVFDRTLDR 387
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
D+V+W+ MI GY + +A+ ++ + R G HP+D +F+ ++ AC++
Sbjct: 388 DVVVWSAMIVGYGLHGR-AREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/647 (37%), Positives = 374/647 (57%), Gaps = 36/647 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+++F + ++A Y + R+A+AR++FD + + D V +NT++S + A+ +F DM
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM 198
Query: 123 REKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ D T++ ++ A +L L + CLA+ GF +A V L YS+ G +
Sbjct: 199 VKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEI 258
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+ A+ +F ++G+ D VS+N+M+ Y + E +++LF+E++ ++ ++ ++
Sbjct: 259 ETARLLFGQIGQ-PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPV 317
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
F L H KSG NS + + L +Y++ + ++ +F+E + L
Sbjct: 318 FFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN-EIESARLLFDESSEKSLAS 376
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WN MISGY+Q +++A+ F+++ + P+ + ++SAC+ L SLGK +H L
Sbjct: 377 WNAMISGYAQNG-LTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI 435
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ SN I V+ AL+ MY+KCG++ +A+RLF MPE N V+ N+MI+GY HG G EA
Sbjct: 436 NRESFESN-IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEA 494
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF ML + + PT +TF+SVL AC+H G V EG + F M GFEP EHY+CM+D
Sbjct: 495 LNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVD 554
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LLGRAG L A I MP PG ++A A++ +L+P N
Sbjct: 555 LLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGY 614
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+NIY+A + E A++R +++ R + K PG + IEV +H+F + D SHP I
Sbjct: 615 YVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAI 674
Query: 583 HNYLEEMSRKMKQAGY----------VPDKEKRLV--HHSEKLAVAFGLLSTSYGEPILV 630
+ LE+++ KM++AG+ V ++EK L+ HSEKLA+AFGL+++ G I +
Sbjct: 675 YAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRI 734
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+C DCHNA KFIS I R I VRD RFH FKDG CSCGDYW
Sbjct: 735 IKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 243/471 (51%), Gaps = 20/471 (4%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQ--------HANVFSFNVLLAAYARQLRIASARQLFD 89
N F+ L ++ L H NQT H ++ + L + I A LF
Sbjct: 11 NLFLTLINRVSTL----HQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFS 66
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR-FDTDGFTLSGLITASSNNLCLI 148
IP PDL YN LI A++ SA+SL+ +R+ + D FT + +I+ +S+ L
Sbjct: 67 TIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLG-LG 125
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
LH +I GF V ++++ CY + + A++VF M E +D V WN+MV +
Sbjct: 126 LLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE-RDTVLWNTMVSGLVK 184
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ +F +MV +G D T+A++L L+DL G+ +K GFH ++++
Sbjct: 185 NSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+GL LY+KC G++ +F +I QPDLV +N MISGY+ E ++ ++ FK+L
Sbjct: 245 ITGLACLYSKC-GEIETARLLFGQIGQPDLVSYNAMISGYTCNNE-TESSVRLFKELLVS 302
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + S V +I L + IH K + SV+ AL +YS+ +E
Sbjct: 303 GEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTK-SGVVSNSSVSTALTTVYSRLNEIES 361
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
AR LFD E + S N+MI+GYAQ+G+ +A+ LF+ M + + P +T S+LSACA
Sbjct: 362 ARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQ 421
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G ++ G K+ + + FE + +ID+ + G +T+A+RL MP
Sbjct: 422 LGALSLG-KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP 471
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 39/268 (14%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
+YS+ + +A F+++ ++ S+N +++ YA+
Sbjct: 352 VYSRLNEIESARLLFDESSEKSLASWNAMISGYAQN------------------------ 387
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF 160
G TE A+SLF++M++ + T++ +++A + L L K +H L F
Sbjct: 388 -------GLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESF 440
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
+ V+ +L+ Y++ G + EA+R+F M E K+ V+WN+M+ YG H G EAL LF
Sbjct: 441 ESNIFVSTALIDMYAKCGSITEAQRLFSMMPE-KNAVTWNAMISGYGLHGYGHEALNLFN 499
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
EM+ ++ T S+L A S LV G F + + GF + ++DL +
Sbjct: 500 EMLHSRVSPTGVTFLSVLYA-CSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGR 558
Query: 279 CSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+G++ + ++P +P +W ++
Sbjct: 559 -AGNLDKALDFIRKMPVEPGPPVWGALL 585
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H L + + ++S I +Y+KCG ++ A F+
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMM 470
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
N ++N +++ Y A LF+++ P V++ +++ A + G
Sbjct: 471 PEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGD 530
Query: 117 SLFKDM 122
+F+ M
Sbjct: 531 EIFRSM 536
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/707 (34%), Positives = 388/707 (54%), Gaps = 71/707 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C ++L G+ +H+L +K + ++ + +YSKCG
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG------------ 363
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
L I A +F I +PD+V ++ LI+ G +E ++ LF
Sbjct: 364 ------------------LAI-DAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + +T+ L++A++N NL + +H GF+ +V+N+L+T Y +NG
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLAS 236
+ + +++ M + +D +SWN+ + G H G+ L +F M+ +MYT S
Sbjct: 465 CVHDGTKLYESMVD-RDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
IL + + L D+ G Q HAH+IK+ N+ + + LID+YAKC + D F +
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY-LEDADVAFNRLSVR 580
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
DL W +I+ Y+Q + ++AL F+++ + G P++ + +S CS+L S G+Q+
Sbjct: 581 DLFTWTVIITNYAQTNQ-GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H++ K S+ V +ALV MY+KCG +E+A LF+ + +T++ N++I GYAQ+G
Sbjct: 640 HSMVFKSGHVSDMF-VGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQ 698
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +AL F ML+ I P +TF +LSAC+H G V EG+++F+ M FG P +H +
Sbjct: 699 GNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCA 758
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS 518
CM+D+LGR GK + E I+ M + ++ KAAN +L+P
Sbjct: 759 CMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPE 818
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
Y++L+NI+A G+W++V +R LM +GV+K+PG SW+E Q+H FV+ D SHP
Sbjct: 819 EESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQ 878
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
I+EIH L+E+ R++ YVP +K++ L HSE+LA+ F L+STS +
Sbjct: 879 IQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEK 938
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
I + KNLRIC DCH+ +K IS+I +EI VRD RFH FK+G CSC
Sbjct: 939 KIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 150/547 (27%), Positives = 250/547 (45%), Gaps = 47/547 (8%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA-------- 74
++YL + + N F L C + HA F +LL
Sbjct: 197 SIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVD 256
Query: 75 -YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
YA+ I A ++F +P+ + V++N L++ YA GD L LF M E + FT
Sbjct: 257 LYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFT 316
Query: 134 LSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
L+ ++ A+S NL + +H L I CG++ + L+ YS+ G +A VF +
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK 376
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+ D V W++++ Q + E+++LF M + YT+ S+L+A T+ +L G
Sbjct: 377 K-PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HA + K GF + + + L+ +Y K +G + D K++E + DL+ WN +SG
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMK-NGCVHDGTKLYESMVDRDLISWNAYLSGLHDC 494
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRIS 370
Y D+ L F + G+ P+ +F+ ++ +CS L G+Q+HA IK ++ N
Sbjct: 495 GMY-DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF- 552
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V AL+ MY+KC LEDA F+R+ + + +I YAQ G +AL F M +
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSM------MKDMFGFEPEGEHYSCMIDLLGRA 484
+ P T LS C+ + GQ+ SM + DMF S ++D+ +
Sbjct: 613 VKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFV-------GSALVDMYAKC 665
Query: 485 GKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
G + +AE L EA L + + + + YA +G+ + T R
Sbjct: 666 GCMEEAEALFEA------------------LIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 545 LMRDRGV 551
+M D G+
Sbjct: 708 MMLDEGI 714
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 271/559 (48%), Gaps = 67/559 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+ C +R L K++H L +K+++ ++L + +Y+KC
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKC-------------- 160
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
Y+ A AR + ++P D+VS+ LI G ++ LF++
Sbjct: 161 ------------RYS-----AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI----KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+ + + FTL+ + A S LC+ KQ+H A G V ++L+ Y++
Sbjct: 204 MQNEGIMPNEFTLATGLKACS--LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC 261
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ A ++F M E +++V+WN ++ Y Q + L+LF M+ L + + +TL ++
Sbjct: 262 GEIELASKMFIGMPE-QNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + ++L G H+ +IK G+ N IG GL+D+Y+KC G D + VF+ I +PD
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC-GLAIDAIGVFKTIKKPD 379
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+V+W+ +I+ Q+ + S++++ F + P+ + ++SA +N G+ IH
Sbjct: 380 IVVWSALITCLDQQGQ-SEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIH 438
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A K ++ ++V+NALV MY K G + D +L++ M + + +S N+ ++G G+
Sbjct: 439 ACVWKYGFETD-VAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYS 475
L +F MLE P TF+S+L +C+ V G Q + ++K+ + ++
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL----DDNNFV 553
Query: 476 C--MIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
C +ID+ + L DA+ + FN +L + + ++ YA +
Sbjct: 554 CTALIDMYAKCMYLEDAD-----VAFN-------------RLSVRDLFTWTVIITNYAQT 595
Query: 534 GKWEEVATIRRLMRDRGVQ 552
+ E+ R M+ GV+
Sbjct: 596 NQGEKALNYFRQMQQEGVK 614
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/641 (37%), Positives = 365/641 (56%), Gaps = 38/641 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
+L+AY++ I + R+ FD++P D+VS+N LI+AY D + F+ M + +
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 131 GFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+S ++A ++ + + + + + G + + V +L++ Y + G +A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M +D V+W++MV AY ++ EAL LF++M + + TL S L A SL DL
Sbjct: 121 RMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H + G +G+ L++LY KC G + ++ F +I + ++V W+ + + Y
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKC-GRIEAAVEAFGQIVEKNVVAWSAISAAY 238
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT--IKIEIR 365
++ + D A+ +++ G P+ +FV V+ AC+ ++ G++IH T + +
Sbjct: 239 ARNDRNRD-AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V ALV MYSKCGNL A +FD++ + V NS+IA AQHG +AL LFE
Sbjct: 298 SD-VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFER 356
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + PT ITF SVL AC+H G + +G+K+F G PE EH+ CM+DLLGRAG
Sbjct: 357 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 416
Query: 486 KLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLAN 528
+ D+E L+ MPF P + A+ AA + QL+P PYV+L+N
Sbjct: 417 WIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSN 476
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
+YA +G+W +VA +R+ M+ K+ G SWIEVK ++H F++ D HP I EIH L+
Sbjct: 477 MYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQR 536
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+++ MK+AGYVPD KE + +HSEKLA+AF LL+T G PI V+KNLR+
Sbjct: 537 LTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRV 596
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH A KFIS + REI VRD RFH F++G CSCGDYW
Sbjct: 597 CNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 120/299 (40%), Gaps = 33/299 (11%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C DL +G +H + + + LY KCG + AA AF Q NV
Sbjct: 169 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNV 228
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+++ + AAYAR R A ++ ++ LV +T + D +AL + + E+
Sbjct: 229 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHER 288
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
G G + V +L+ YS+ G L A
Sbjct: 289 TQVLGG---------------------------GLESDVYVLTALVNMYSKCGNLALAGD 321
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F ++ + D V WNS++ QH + +AL+LF+ M L + T S+L A +
Sbjct: 322 MFDKIAHL-DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAG 380
Query: 246 DLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLW 301
L G + I F + H G ++DL + +G + D + +P +P V W
Sbjct: 381 MLDQGRKHFVSFIGDHGIFPEAEHFGC-MVDLLGR-AGWIVDSEDLLLHMPFEPHPVAW 437
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 252/713 (35%), Positives = 388/713 (54%), Gaps = 75/713 (10%)
Query: 37 SNHFILLYSKCGCL----SAAHHAFNQTQHANVFSFNVL--LAAYARQLRIASARQLFDQ 90
S H I L +C L H ++ +S + L +AA + + AR++FD+
Sbjct: 31 SRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDE 90
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDM--REKRFDTDGFTLSGLITASS--NNLC 146
IPQP+ ++NTLI AYA D ++ F DM E + + +T LI A++ ++L
Sbjct: 91 IPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLS 150
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
L + LH +AI V NSL+ CY G LD A +VF + E KD VSWNSM+ +
Sbjct: 151 LGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-KDVVSWNSMINGF 209
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q +AL+LF++M S + T+ +L+A + DL G + +++ ++ + N
Sbjct: 210 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNL 269
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY--SDQALGCFKK 324
+ + ++D+Y KC G + D ++F+ + + D V W TM+ GY+ E+Y + + L K
Sbjct: 270 TLANAMLDMYTKC-GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328
Query: 325 LNRVGYH-----------PDDC------------------SFVCVISACSNLSP-SLGKQ 354
+ V ++ P++ + V +SAC+ + LG+
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRW 388
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH+ K I+ N V +AL+ MYSKCG+LE AR +F+ + + + ++MI G A HG
Sbjct: 389 IHSYIKKNGIKMN-FYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHG 447
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G EA+ +F M E N+ P +TF +V AC+HTG V E + F M+ +G PE +HY
Sbjct: 448 CGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHY 507
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP 517
+C++D+LGR+G L A + IEAMP P S+A A L+LEP
Sbjct: 508 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEP 567
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N +V+L+NIYA SGKW+ V+ +R+ MR G++K+PG S IE+ +H F++ D +HP
Sbjct: 568 RNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 627
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSY 624
M ++++ L E+ K+K GY P+ KE+ L HSEKLA+ +GL+ST
Sbjct: 628 MSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 687
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I V+KNLR+CGDCH K IS + REI VRD YRFH F++G+CSC D+W
Sbjct: 688 PKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 9/331 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C RDL G+ + + +N V + L+N + +Y+KCG + A F+
Sbjct: 236 TMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 295
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + ++ +L YA +AR++ + +P+ D+V++N LISAY G AL +F
Sbjct: 296 EEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFH 355
Query: 121 DMR-EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+++ +K + TL ++A + L L + +H G V ++L+ YS+
Sbjct: 356 ELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKC 415
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L++A+ VF + E +D W++M+ H G EA+ +F +M + + T ++
Sbjct: 416 GDLEKAREVFNSV-EKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNV 474
Query: 238 LTA--FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
A T L D L + ++ H ++D+ + SG + +K E +P
Sbjct: 475 FCACSHTGLVDEAESLFYKMESSYGIVPEDKHYAC-IVDVLGR-SGYLEKAVKFIEAMPI 532
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
P +W ++ S + C + L
Sbjct: 533 PPSTSVWGALLGACKIHANLSLAEMACTRLL 563
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 263/758 (34%), Positives = 390/758 (51%), Gaps = 112/758 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C L G S+HA+ N + + ++ N + +Y +CG L AH F++
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ D+VS+N++++AY G + +AL +
Sbjct: 189 LERKI----------------------------EDIVSWNSILAAYVQGGQSRTALRIAF 220
Query: 121 DMREK---RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYS 175
M + D TL ++ A ++ L KQ+H ++ G V N+L++ Y+
Sbjct: 221 RMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYA 280
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVV------------------------------- 204
+ ++EA +VF E + KD VSWN+MV
Sbjct: 281 KCSKMNEANKVF-EGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWS 339
Query: 205 ----AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
Y Q G EAL +F++M L ++ TLAS+L+ S+ L+ G Q HA++IK+
Sbjct: 340 AVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKN 399
Query: 261 GFHQNSH-------IGSGLIDLYAKCSGDMRDCMKVFEEIPQPD--LVLWNTMISGYSQK 311
+ N + + +GLID+YAKC R +F+ I D +V W MI GY+Q
Sbjct: 400 ILNLNWNDKEDDLLVLNGLIDMYAKCK-SYRVARSIFDSIEGKDKNVVTWTVMIGGYAQH 458
Query: 312 EEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
E +D AL F ++ + P+ + C + AC+ L LG+Q+HA ++ E S
Sbjct: 459 GEAND-ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEV 517
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V N L+ MYSK G+++ AR +FD M N VS S++ GY HG G EAL LF+ M +
Sbjct: 518 LYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQK 577
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
ITF+ VL AC+H+G V +G YF M FG P EHY+CM+DLLGRAG+L
Sbjct: 578 LGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLN 637
Query: 489 DAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLANIYA 531
+A LI+ M P ++ AA+ +L N Y +L+N+YA
Sbjct: 638 EAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYA 697
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSR 591
+ +W++VA IR LM+ G++K+PG SWI+ KK F D SHP ++I+N L ++ +
Sbjct: 698 NARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIK 757
Query: 592 KMKQAGYVP----------DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
++K GYVP D+EK L HSEKLAVA+G+L+T+ G+PI + KNLRICGD
Sbjct: 758 RIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGD 817
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CH+A+ +IS I EI +RD+ RFH FK G CSC YW
Sbjct: 818 CHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 252/571 (44%), Gaps = 84/571 (14%)
Query: 40 FILLYSKCGCLSAAHHAFNQT-QHANVFSFNVLLAAYARQLRIASARQLFDQ-IPQPDLV 97
I L +C L A A Q H F+ + AY A A L + IP V
Sbjct: 33 LISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPSHSTV 92
Query: 98 -SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
+N LI G + L + M+ + D +T ++ A L AI
Sbjct: 93 FWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAI 152
Query: 157 YC--GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE--IKDEVSWNSMVVAYGQHREG 212
C G + NS++ Y R G LD+A ++F E+ E I+D VSWNS++ AY Q +
Sbjct: 153 VCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQS 212
Query: 213 LEALQLFQEM---VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
AL++ M SL+L D TL +IL A S+ L G Q H +++G + +G
Sbjct: 213 RTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVG 272
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ--------------KEE-- 313
+ L+ +YAKCS M + KVFE I + D+V WN M++GYSQ +EE
Sbjct: 273 NALVSMYAKCS-KMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI 331
Query: 314 ------------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQ 354
+ +AL F+++ G P+ + ++S C+++ L GKQ
Sbjct: 332 KLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQ 391
Query: 355 IHALTIKIEI------RSNRISVNNALVAMYSKCGNLEDARRLFDRM--PEHNTVSLNSM 406
HA IK + + + + V N L+ MY+KC + AR +FD + + N V+ M
Sbjct: 392 THAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVM 451
Query: 407 IAGYAQHGIGMEALRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
I GYAQHG +AL+LF + +T++ P T L ACA G++ G++ +
Sbjct: 452 IGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHA----- 506
Query: 465 FGFEPEGEHY-----SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSN 519
+ E E +C+ID+ ++G + DA R + F ++ N
Sbjct: 507 YALRNENESEVLYVGNCLIDMYSKSGDI-DAARAV-----------------FDNMKLRN 548
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
V + L Y G+ EE + M+ G
Sbjct: 549 VVSWTSLMTGYGMHGRGEEALHLFDQMQKLG 579
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/642 (36%), Positives = 365/642 (56%), Gaps = 44/642 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK---RF 127
++ Y + R+ AR++FD++P+ D + +NT+IS Y ++ +F+D+ + R
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 128 DTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
DT TL ++ A + L L Q+H LA G + V ++ YS+ G +
Sbjct: 220 DTT--TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F E + D V++N+M+ Y + E +L LF+E++ L TL S++ L
Sbjct: 278 LFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ H + +KS F ++ + + L +Y+K + ++ K+F+E P+ L WN MI
Sbjct: 337 LIYA---IHGYCLKSNFLSHASVSTALTTVYSKLN-EIESARKLFDESPEKSLPSWNAMI 392
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SGY+Q ++ A+ F+++ + + P+ + C++SAC+ L SLGK +H L +
Sbjct: 393 SGYTQNG-LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ I V+ AL+ MY+KCG++ +ARRLFD M + N V+ N+MI+GY HG G EAL +F
Sbjct: 452 ESS-IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
ML + I PT +TF+ VL AC+H G V EG + F+ M +GFEP +HY+CM+D+LGRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G L A + IEAM PGS +A + +L+P N +V+L+
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NI++A + + AT+R+ + R + K PG++ IE+ + HVF + D SHP +KEI+ LE
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 588 EMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ KM++AGY P+ E L HSE+LA+AFGL++T G I ++KNLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+C DCH K IS I R I VRD RFH FKDG CSCGDYW
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 252/513 (49%), Gaps = 29/513 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR-FDTDGFTLSGLITASS 142
AR +F + +PD+ +N L+ ++ S+LS+F +R+ + T + I+A+S
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 143 --NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+ + +H A+ G D + ++++ Y + +++A++VF M E KD + WN
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWN 189
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
+M+ Y ++ +E++Q+F+++++ LD TL IL A L++L G+Q H+ K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+G + + ++ +G I LY+KC G ++ +F E +PD+V +N MI GY+ E ++ +L
Sbjct: 250 TGCYSHDYVLTGFISLYSKC-GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE-TELSL 307
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
FK+L G + V ++ +L L IH +K S+ SV+ AL +Y
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHL--MLIYAIHGYCLKSNFLSH-ASVSTALTTVY 364
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
SK +E AR+LFD PE + S N+MI+GY Q+G+ +A+ LF M ++ P +T
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+LSACA G ++ G+ +++ FE + +I + + G + +A RL + M
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT- 482
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
N V + + + Y G+ +E I M + G+ P
Sbjct: 483 -----------------KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+ H + ++G IH Y E S K
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%), Gaps = 45/322 (13%)
Query: 20 SLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQL 79
++H LK+ A +S +YSK + +A F+++ ++ S+N +++ Y +
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN- 398
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
G TE A+SLF++M++ F + T++ +++
Sbjct: 399 ------------------------------GLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 140 ASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A + L L K +H L F+ V+ +L+ Y++ G + EA+R+F M + K+EV
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK-KNEV 487
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV--GGLQFHA 255
+WN+M+ YG H +G EAL +F EM++ + T +L A S LV G F++
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA-CSHAGLVKEGDEIFNS 546
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEY 314
+ + GF + + ++D+ + +G ++ ++ E + +P +W T++ G + +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGR-AGHLQRALQFIEAMSIEPGSSVWETLL-GACRIHKD 604
Query: 315 SDQALGCFKKL-----NRVGYH 331
++ A +KL + VGYH
Sbjct: 605 TNLARTVSEKLFELDPDNVGYH 626
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD------CMKVFEEIPQPDLVLWNTMI 305
Q HA +I GF + I L K + + D +F + +PD+ L+N ++
Sbjct: 38 QTHAQIILHGFRND-------ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 306 SGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIE 363
G+S E +L F L + P+ ++ ISA S G+ IH + ++
Sbjct: 91 RGFSVNES-PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV-VD 148
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + + + +V MY K +EDAR++FDRMPE +T+ N+MI+GY ++ + +E++++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 424 EWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
++ E+ T + +L A A ++ G + S+
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H L S Y+S I +Y+KCG
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS----------- 470
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
IA AR+LFD + + + V++NT+IS Y G + AL++F
Sbjct: 471 --------------------IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 121 DM 122
+M
Sbjct: 511 EM 512
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/594 (39%), Positives = 337/594 (56%), Gaps = 52/594 (8%)
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQ-------LHCLAIYCGFDHYASVNNSLLTCY 174
M R D T S LI CL++ +H G++ + N+L+ Y
Sbjct: 7 MHRNRLSADAITYSELIKC-----CLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMY 61
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G LDEA+ +F EM + ++ VSW +M+ AY +AL M+ + +MYT
Sbjct: 62 VKFGLLDEARNLFDEMPD-RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+S+L A L +L Q H ++K G + + S LID Y+K G+ D + VF E+
Sbjct: 121 SSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKL-GEQHDALNVFNEMI 176
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
DLV+WN++I G++Q + D+ L +K++ R + D + V+ AC+ L+ LG+
Sbjct: 177 TGDLVVWNSIIGGFAQNSD-GDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR 235
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQ 412
Q+H +K + + +NNAL+ MY KCG+LEDA LF RM E + +S ++MIAG AQ
Sbjct: 236 QVHVHVLKYD---QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+G +AL+LFE M P IT + VL AC+H G V +G YF MK+ FG +P E
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGRE 352
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQL 515
HY C+IDLLGRAGKL +A +LI M P ++ A+ AA L+L
Sbjct: 353 HYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKL 412
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+P++A Y++L+NIYA S KWE+VA +RR MR RGV+K PG SWIEV KQ+H F+ D S
Sbjct: 413 DPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNS 472
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLSTS 623
HP I+EI L ++ +++ + GYVPD E L +HSEKLA+ FGL+S
Sbjct: 473 HPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP 532
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I + KNLRICGDCH K +S + R I +RD R+H F+ G CSCGDYW
Sbjct: 533 NQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 151/293 (51%), Gaps = 7/293 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F+ F N L+ Y + + AR LFD++P ++VS+ T+ISAY++
Sbjct: 41 HVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHK 100
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
AL M + + +T S ++ A + L ++QLH + G + V ++L+ Y
Sbjct: 101 ALDFLILMLREGVRPNMYTYSSVLRA-CDGLLNLRQLHGSILKVGLESDVFVRSALIDTY 159
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ G +A VF EM D V WNS++ + Q+ +G E L L++ M D TL
Sbjct: 160 SKLGEQHDALNVFNEM-ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTL 218
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE-I 293
S+L A T L L G Q H H++K + Q+ + + L+D+Y KC G + D +F +
Sbjct: 219 TSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKC-GSLEDANLLFTRMM 275
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ D++ W+TMI+G +Q +S AL F+ + G P+ + + V+ ACS+
Sbjct: 276 TEKDVISWSTMIAGLAQN-GFSADALKLFEAMKSKGPKPNYITILGVLFACSH 327
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +H LK L+N + +Y KCG L A+ F +
Sbjct: 217 TLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRM 274
Query: 61 Q-HANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESA 115
+V S++ ++A A+ A A +LF+ + P+P+ ++ ++ A + G
Sbjct: 275 MTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG 334
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F+ M+E I G +HY + + L
Sbjct: 335 WYYFQSMKEH----------------------------FGIDPGREHYGCIIDLL----G 362
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LDEA ++ +EM D V+W ++ A H+ A+ +E++ L
Sbjct: 363 RAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKL 412
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/688 (36%), Positives = 372/688 (54%), Gaps = 83/688 (12%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL YA+ + A ++F++IPQ D+ S+ LIS +A G + L LF M+++
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 129 TDGFTLSGLITASSNNLC---LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+ FTLS ++ + S+N+ + K +H + G D A +NNS+L Y + A++
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 186 VFYEMGEIKDEVSWNSMVVAY-----------------------------GQHREGLE-- 214
+F M E KD VSWN M+ +Y G R G E
Sbjct: 445 LFGLMAE-KDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL+L +MV+ + T + L +SL L G Q H ++K G + + + LID
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563
Query: 275 LYAKCSGDMRDCMKVFEEIPQP---------------DLVLWNTMISGYSQKEEYSDQAL 319
+Y KC G+M +F+ +PQ + V W++M+SGY Q + D AL
Sbjct: 564 MYCKC-GEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFED-AL 621
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F + D + V+SAC++ LG+Q+H KI + + ++++ M
Sbjct: 622 KTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG-HGLDVFLGSSIIDM 680
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KCG+L DA +F++ + N V SMI+G A HG G EA+RLFE M+ I P ++F
Sbjct: 681 YVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSF 740
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
V VL+AC+H G + EG KYF +M++++G P EH++CM+DL GRAG+L + + I
Sbjct: 741 VGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNA 800
Query: 499 FNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
+ S + + L+LEP +A PY++ ++I A +WEE A
Sbjct: 801 ISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAK 860
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
IR LM+ RGV+K P SWI++K Q+H FV D SHP +I++YL+E+ ++K+ GY D
Sbjct: 861 IRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTD 920
Query: 602 ---------KEKRLV---HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+E+R V +HSEKLA+A+G++ST+ G PI VMKNLR+C DCHN IK+ S
Sbjct: 921 VTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASE 980
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ GREI +RD +RFH FK G CSC DYW
Sbjct: 981 LLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 19/363 (5%)
Query: 1 TFRQVLKTCVGR-RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VLK+C D GK +H L+N + A L+N + Y KC C A F
Sbjct: 389 TLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGL 448
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ S+N+++++Y + + + LF Q+P D S+NT+I G AL L
Sbjct: 449 MAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELL 508
Query: 120 KDMREK--RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M F+ F+++ ++ +S + L L KQ+H + G V NSL+ Y +
Sbjct: 509 YKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKC 568
Query: 178 GFLDEAKRVFYEMGE--------------IKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
G +++A +F + + + + VSW+SMV Y Q+ +AL+ F M+
Sbjct: 569 GEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMI 628
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
Q+ +D +TL S+++A S L G Q H ++ K G + +GS +ID+Y KC G +
Sbjct: 629 CSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC-GSL 687
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
D +F + ++VLW +MISG + + +A+ F+ + G P++ SFV V++A
Sbjct: 688 NDAWLIFNQAKDRNVVLWTSMISGCALHGQ-GREAVRLFELMINEGITPNEVSFVGVLTA 746
Query: 344 CSN 346
CS+
Sbjct: 747 CSH 749
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/647 (37%), Positives = 374/647 (57%), Gaps = 54/647 (8%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ L+ AR +ASAR++FD + + +V + LIS Y E A+ LF D E F+
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFE 251
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF---LDEA 183
D +T+S +I+A + ++ L QLH LA+ G A V+ L+ Y+++ +D A
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYA 311
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLE---ALQLFQEMVSLQLGLDMYTLASILTA 240
+VF M + D +SW +++ Y Q G++ + LF EM++ + + T +SIL +
Sbjct: 312 NKVFERMPK-NDVISWTALISGYVQ--SGVQENKVMALFGEMLNESIKPNHITYSSILKS 368
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+ D G Q HAH+IKS +G+ L+ +YA+ SG M + +VF ++ +
Sbjct: 369 CASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAE-SGCMEEARRVFNQLYE----- 422
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+MI ++ ++ ++ R+ +F +ISA +++ + G+Q+HA++
Sbjct: 423 -RSMIPCITEGRDFPLD-----HRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMS 476
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K S+R V+N+LV+MYS+CG LEDA R F+ + + N +S SMI+G A+HG A
Sbjct: 477 LKAGFGSDRF-VSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF M+ T + P ++T+++VLSAC+H G V EG++YF M+ G P EHY+CM+D
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
LL R+G + +A I MP ++ K A + ++LEP + P
Sbjct: 596 LLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAP 655
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA +G W+EVA IR MRD + K+ G SW+EV+ H F A D SHP ++I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+ + R++K GYVPD KE+ L+ HSEK+AVAFGL++TS +PI +
Sbjct: 716 YGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH+AIK++S REI +RD+ RFH KDG CSCG+YW
Sbjct: 776 FKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 233/486 (47%), Gaps = 62/486 (12%)
Query: 52 AAHHAFNQTQHANVFSFNVLLAAYARQLRIASA---RQLFDQIPQPDLVSYNTLISAYAD 108
AAH A + + ++V S + AA A LR+ A R L + D V N+L++ Y+
Sbjct: 38 AAHPALSSSHPSDV-SALLAAAARAGDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSR 96
Query: 109 CGDTESALSLFKDMREKRFDTDGFTLSGLIT---ASSNNLCLIKQL-----------HCL 154
CG SA ++F MR R ++ + A +L LI ++ C
Sbjct: 97 CGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCA 156
Query: 155 AIYCGFDHY----------------------ASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
A + F H +V ++L+ +RNG L A++VF + E
Sbjct: 157 AAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIE 216
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
K V W ++ Y Q EA++LF + + D YT++S+++A T L + GLQ
Sbjct: 217 -KTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ 275
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRD-CMKVFEEIPQPDLVLWNTMISGYSQ 310
H+ ++ G ++ + GL+D+YAK + G D KVFE +P+ D++ W +ISGY Q
Sbjct: 276 LHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQ 335
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
++ + F ++ P+ ++ ++ +C+++S G+Q+HA IK SN+
Sbjct: 336 SGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIK----SNQA 391
Query: 370 S---VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
S V NALV+MY++ G +E+ARR+F+++ E SMI + L +
Sbjct: 392 SAHTVGNALVSMYAESGCMEEARRVFNQLYER------SMIPCITEG----RDFPLDHRI 441
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ ++ ++ TF S++SA A G + +GQ+ +M GF + + ++ + R G
Sbjct: 442 VRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKA-GFGSDRFVSNSLVSMYSRCGY 500
Query: 487 LTDAER 492
L DA R
Sbjct: 501 LEDACR 506
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 10/262 (3%)
Query: 246 DLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVLWNT 303
DL G H L++ +++ + + L+ LY++C G + VF+ + D+V W
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRC-GAVASARNVFDGMRGLRDIVSWTA 121
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIK 361
M S ++ L ++ G P+ + AC L +G + L K
Sbjct: 122 MASCLARNGAERGSLL-LIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHK 180
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ + ++V +AL+ M ++ G+L AR++FD + E V +I+ Y Q EA+
Sbjct: 181 MGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF LE P T S++SAC G V G + S+ M G + ++D+
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRM-GLASDACVSCGLVDMY 299
Query: 482 GRA--GKLTD-AERLIEAMPFN 500
++ G+ D A ++ E MP N
Sbjct: 300 AKSNIGQAMDYANKVFERMPKN 321
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 157/386 (40%), Gaps = 61/386 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK+C D +G+ +HA +K+ + + N + +Y++ GC+ A FNQ
Sbjct: 361 TYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL 420
Query: 61 QHANVFSFNVLLAAYARQLRIASARQ--LFDQIPQPDL----VSYNTLISAYADCGDTES 114
++ I R L +I + D+ ++ +LISA A G
Sbjct: 421 YERSMIPC------------ITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTK 468
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
L + F +D F + L++ S
Sbjct: 469 GQQLHAMSLKAGFGSDRFVSNSLVSMYS-------------------------------- 496
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
R G+L++A R F E+ + ++ +SW SM+ +H AL LF +M+ + + T
Sbjct: 497 -RCGYLEDACRSFNELKD-RNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
++L+A + + + G ++ + + G + ++DL A+ SG +++ ++ E+
Sbjct: 555 IAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLAR-SGIVKEALEFINEM 613
Query: 294 P-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
P + D ++W T++ + + +G N V P D + ++ SNL G
Sbjct: 614 PLKADALVWKTLLGAC---RSHDNIEVGEITAKNVVELEPRDPAPYVLL---SNLYADAG 667
Query: 353 KQIHALTIKIEIRSNRISVNNALVAM 378
I+ +R N ++ L M
Sbjct: 668 LWDEVARIRSAMRDNNLNKETGLSWM 693
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 252/722 (34%), Positives = 393/722 (54%), Gaps = 58/722 (8%)
Query: 6 LKTCVGRRDLVTGKSLHALY---------LKN--LVP----FSAYLSNHFILLYSKCGCL 50
++ V L++G S H Y L+N +VP S+ L LL K G
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG-- 226
Query: 51 SAAHHAFNQTQHANVFSF--NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
H F N S N LLA Y + R AR++FD++ D V+YNT+I Y
Sbjct: 227 -QGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK 285
Query: 109 CGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASV 166
E ++ +F + ++ F D T++ ++ A + +L L K ++ + GF ++V
Sbjct: 286 LEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTV 344
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
N L+ Y++ G + A+ VF M E KD VSWNS++ Y Q + +EA++LF+ M+ ++
Sbjct: 345 KNILIDVYAKCGDMITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
D T +++ T L DL G H++ IKSG + + + + LID+YAKC G++ D
Sbjct: 404 EQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKC-GEVGDS 462
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+K+F + D V WNT+IS + +++ L ++ + PD +F+ + C++
Sbjct: 463 LKIFNSMGTLDTVTWNTVISACVRFGDFA-TGLQVTTQMRKNKVVPDMATFLVTLPMCAS 521
Query: 347 LSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ LGK+IH ++ S + + NAL+ MYSKCG LE + R+F+RM + V+
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESE-LQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTG 580
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI Y +G G +AL F M ++ I P ++ F++++ AC+H+G V +G F MK +
Sbjct: 581 MIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHY 640
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKA 508
+P EHY+C++DLL R+ K++ AE I+AMP P + A +
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERV 700
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
+ ++L P + ++ +N YAA KW++V+ IR+ +RD+ ++K PG+SWIE+ K++HV
Sbjct: 701 SRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHV 760
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAV 615
F + D S P + IH LE + M + GY+PD K + + HSE+LA+
Sbjct: 761 FCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAI 820
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AFGLL+T G P+ VMKNLR+C DCH K IS I GREI VRD RFH FKDG CSC D
Sbjct: 821 AFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKD 880
Query: 676 YW 677
W
Sbjct: 881 RW 882
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 262/494 (53%), Gaps = 32/494 (6%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++++ N L+ Y+R ++ ARQ+FD++P DLVS+N+LIS Y+ G E AL ++ +
Sbjct: 138 ESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R D FT+S ++ A + NL ++KQ LH + G + + VNN LL Y +
Sbjct: 198 LRNSWIVPDSFTVSSVLPAFA-NLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFS 256
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+RVF EM ++D V++N+M+ Y + E++++F E + Q D+ T+ S+L
Sbjct: 257 RPTDARRVFDEM-VVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTVTSVL 314
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL + +++++GF S + + LID+YAKC GDM VF + D
Sbjct: 315 CACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKC-GDMITARDVFNSMECKDT 373
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN++ISGY Q + +A+ FK + + D +++ +IS + L+ GK +H+
Sbjct: 374 VSWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHS 432
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK I + +SV+NAL+ MY+KCG + D+ ++F+ M +TV+ N++I+ + G
Sbjct: 433 NGIKSGIYID-LSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFA 491
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
L++ M + + P TF+ L CA G++ + FG+E E + + +
Sbjct: 492 TGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNAL 550
Query: 478 IDLLGRAGKLTDAERLIEAMP----------------FNPGSIALKAANHFLQLEPSNAV 521
I++ + G L + R+ E M + G AL++ F+ +E S V
Sbjct: 551 IEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALES---FVDMEKSGIV 607
Query: 522 P--YVMLANIYAAS 533
P V +A IYA S
Sbjct: 608 PDSVVFIALIYACS 621
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 239/486 (49%), Gaps = 47/486 (9%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA-NVFSFNVLLAAYAR 77
+ +HAL + + S + S I YS +++ F + A NV+ +N ++ A+++
Sbjct: 24 RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSK 83
Query: 78 QLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
A + + ++ + PD ++ ++I A A D E ++K + E F++D +
Sbjct: 84 NGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLY- 142
Query: 134 LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
V N+L+ YSR G L A++VF EM +
Sbjct: 143 --------------------------------VGNALVDMYSRMGLLSRARQVFDEM-PV 169
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D VSWNS++ Y H EAL+++ E+ + + D +T++S+L AF +L + G
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGL 229
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H +KSG + S + +GL+ +Y K S D +VF+E+ D V +NTMI GY + E
Sbjct: 230 HGFTLKSGVNSVSVVNNGLLAMYLKFSRPT-DARRVFDEMVVRDSVTYNTMICGYLKLEM 288
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+ + L++ + PD + V+ AC +L SL K I+ ++ +V
Sbjct: 289 VEESVKMFLENLDQ--FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLES-TVK 345
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ +Y+KCG++ AR +F+ M +TVS NS+I+GY Q G MEA++LF+ M+
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+IT++ ++S + G+ S +K G + + +ID+ + G++ D+
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKS--GIYIDLSVSNALIDMYAKCGEVGDSL 463
Query: 492 RLIEAM 497
++ +M
Sbjct: 464 KIFNSM 469
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 187/359 (52%), Gaps = 6/359 (1%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+SS+NL ++++H L I G D + L+ YS + VF + K+ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIW 74
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ A+ ++ +AL+ + ++ ++ D YT S++ A L D G + +++
Sbjct: 75 NSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILE 134
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + ++G+ L+D+Y++ G + +VF+E+P DLV WN++ISGYS Y ++AL
Sbjct: 135 MGFESDLYVGNALVDMYSRM-GLLSRARQVFDEMPVRDLVSWNSLISGYSS-HGYYEEAL 192
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ +L PD + V+ A +N L G+ +H T+K + S + VNN L+AM
Sbjct: 193 EIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSV-VNNGLLAM 251
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K DARR+FD M ++V+ N+MI GY + + E++++F L+ P +T
Sbjct: 252 YLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTV 310
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
SVL AC H ++ + ++ M GF E + +ID+ + G + A + +M
Sbjct: 311 TSVLCACGHLRDLSLAKYIYNYMLRA-GFVLESTVKNILIDVYAKCGDMITARDVFNSM 368
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 115/223 (51%), Gaps = 5/223 (2%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI- 293
A I A +S +L + HA +I G + LID Y+ + VF +
Sbjct: 8 AFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPA-SSLSVFRRVS 66
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
P ++ +WN++I +S K + +AL + KL PD +F VI AC+ L +G
Sbjct: 67 PAKNVYIWNSIIRAFS-KNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
++ +++ S+ + V NALV MYS+ G L AR++FD MP + VS NS+I+GY+
Sbjct: 126 DLVYKQILEMGFESD-LYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
HG EAL ++ + + I P + T SVL A A+ V +GQ
Sbjct: 185 HGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQ 227
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/640 (36%), Positives = 364/640 (56%), Gaps = 38/640 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+A Y + R AR++FD++ D VSYNT+I Y E ++ +F + ++ F D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 131 GFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T+S ++ A + +L L K ++ + GF ++V N L+ Y++ G + A+ VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M E KD VSWNS++ Y Q + +EA++LF+ M+ ++ D T +++ T L DL
Sbjct: 367 SM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H++ IKSG + + + LID+YAKC G++ D +K+F + D V WNT+IS
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKC-GEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSN 367
+ +++ L ++ + PD +F+ + C++L+ LGK+IH ++ S
Sbjct: 485 VRFGDFA-TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + NAL+ MYSKCG LE++ R+F+RM + V+ MI Y +G G +AL F M
Sbjct: 544 -LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
++ I P ++ F++++ AC+H+G V EG F MK + +P EHY+C++DLL R+ K+
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 488 TDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIY 530
+ AE I+AMP P + A + + ++L P + ++ +N Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
AA KW++V+ IR+ ++D+ + K PG+SWIEV K +HVF + D S P + I+ LE +
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Query: 591 RKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
M + GY+PD K + + HSE+LA+AFGLL+T G P+ VMKNLR+C
Sbjct: 783 SLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVC 842
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH K IS I GREI VRD RFH FKDG CSC D W
Sbjct: 843 GDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 260/491 (52%), Gaps = 26/491 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+++F N L+ Y+R + ARQ+FD++P DLVS+N+LIS Y+ G E AL ++ +
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ D FT+S ++ A NL ++KQ LH A+ G + VNN L+ Y +
Sbjct: 198 LKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+RVF EM +++D VS+N+M+ Y + E++++F E + Q D+ T++S+L
Sbjct: 257 RPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVL 314
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL + +++K+GF S + + LID+YAKC GDM VF + D
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC-GDMITARDVFNSMECKDT 373
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN++ISGY Q + +A+ FK + + D +++ +IS + L+ GK +H+
Sbjct: 374 VSWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK I + +SV+NAL+ MY+KCG + D+ ++F M +TV+ N++I+ + G
Sbjct: 433 NGIKSGICID-LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
L++ M ++ + P TF+ L CA G++ + FG+E E + + +
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNAL 550
Query: 478 IDLLGRAGKLTDAERLIEAMPFN-----PGSI--------ALKAANHFLQLEPSNAVP-- 522
I++ + G L ++ R+ E M G I KA F +E S VP
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 523 YVMLANIYAAS 533
V +A IYA S
Sbjct: 611 VVFIAIIYACS 621
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 237/486 (48%), Gaps = 47/486 (9%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA-NVFSFNVLLAAYAR 77
+ +HAL + + S + S I YS +++ F + A NV+ +N ++ A+++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 78 QLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
A + + ++ + PD ++ ++I A A D E +++ + + F++D F
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF- 142
Query: 134 LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
V N+L+ YSR G L A++VF EM +
Sbjct: 143 --------------------------------VGNALVDMYSRMGLLTRARQVFDEM-PV 169
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D VSWNS++ Y H EAL+++ E+ + + D +T++S+L AF +L + G
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H +KSG + + +GL+ +Y K D +VF+E+ D V +NTMI GY + E
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPT-DARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+ + L++ + PD + V+ AC +L SL K I+ +K +V
Sbjct: 289 VEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES-TVR 345
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ +Y+KCG++ AR +F+ M +TVS NS+I+GY Q G MEA++LF+ M+
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+IT++ ++S + G+ S +K G + + +ID+ + G++ D+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 492 RLIEAM 497
++ +M
Sbjct: 464 KIFSSM 469
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+SS+NL ++++H L I G D + L+ YS + VF + K+ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ A+ ++ EAL+ + ++ ++ D YT S++ A L D G + ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +G+ L+D+Y++ G + +VF+E+P DLV WN++ISGYS Y ++AL
Sbjct: 135 MGFESDLFVGNALVDMYSRM-GLLTRARQVFDEMPVRDLVSWNSLISGYSS-HGYYEEAL 192
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ +L PD + V+ A N L G+ +H +K ++ + VNN LVAM
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK-SGVNSVVVVNNGLVAM 251
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K DARR+FD M ++VS N+MI GY + + E++R+F L+ P +T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTV 310
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
SVL AC H ++ + ++ M GF E + +ID+ + G + A + +M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQ 295
I A +S +L + HA +I G + LID Y+ + + VF + P
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFR-EPASSLSVFRRVSPA 68
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
++ LWN++I +S+ + +AL + KL PD +F VI AC+ L +G
Sbjct: 69 KNVYLWNSIIRAFSKNGLFP-EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
++ + + S+ + V NALV MYS+ G L AR++FD MP + VS NS+I+GY+ HG
Sbjct: 128 VYEQILDMGFESD-LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
EAL ++ + + I P + T SVL A + V +GQ
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHN 399
+S+ SNL+ ++IHAL I + + S+ + L+ YS + +F R+ P N
Sbjct: 14 LSSSSNLNEL--RRIHALVISLGLDSSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
NS+I ++++G+ EAL + + E+ + P TF SV+ ACA G +
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ DM GFE + + ++D+ R G LT A ++ + MP
Sbjct: 131 QILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 78/212 (36%), Gaps = 42/212 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C GK +H L+ + N I +YSKCGCL + F
Sbjct: 511 TFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF--- 567
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++ + D+V++ +I AY G+ E AL F
Sbjct: 568 ----------------------------ERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
DM + D +I A S++ + + L C I +HYA V + L
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL--- 656
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
SR+ + +A+ M D W S++ A
Sbjct: 657 -SRSQKISKAEEFIQAMPIKPDASIWASVLRA 687
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/738 (34%), Positives = 378/738 (51%), Gaps = 104/738 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK-CGCLSAAHHAFNQT 60
F L G +L +SL L LK + + +YS+ L A F
Sbjct: 227 FASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N ++++ ++AA + RI +A ++++ P + LI+ A CG + A LF+
Sbjct: 287 IERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFE 346
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ E I S N +L+T Y +NG +
Sbjct: 347 QIPEP------------IVVSWN-------------------------ALITGYMQNGMV 369
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+EAK +F +M ++ +SW M+ Y Q+ EAL L QE+ + + +L SI A
Sbjct: 370 NEAKELFDKM-PFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFA 428
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+++ L G Q H+ +K G NS + LI +Y KC +M +VF + D+V
Sbjct: 429 CSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCR-NMEYARQVFSRMVTKDIVS 487
Query: 301 WN-------------------------------TMISGYSQKEEYSDQALGCFKKLNRVG 329
WN T+IS Y+ E+ S++A+G FK +
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQ-SNEAMGAFKTMFCEH 546
Query: 330 YHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ ++ C +L S +G+QIH + IK+ + S I V NAL++MY KCG D+
Sbjct: 547 ELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELI-VANALISMYFKCG-CADS 604
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RR+FD M E + + N++I GYAQHG+G EA+++++ M + P +TFV +L+AC+H
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHA 664
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----- 503
G V EG K+F M +G P EHY+CM+DLLGR G + AE+ I MP P +
Sbjct: 665 GLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSA 724
Query: 504 ------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
I +AA ++EPSNA YVML+NIY++ G W EVA +R++M+ +GV
Sbjct: 725 LLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGV 784
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
K+PG SW ++K +MH FV D H I+EI LEE+ +K GYVPD
Sbjct: 785 IKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDE 844
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
KE L++HSEKLAVA+ LL+T G PI ++KNLRICGDCH IKF+S + R+I +RD
Sbjct: 845 EQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRD 904
Query: 660 TYRFHCFKDGRCSCGDYW 677
RFH F++G CSC D+W
Sbjct: 905 GNRFHHFRNGSCSCEDFW 922
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 239/495 (48%), Gaps = 43/495 (8%)
Query: 5 VLKTCVGR--RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+L + GR R L + + +N V ++A +S Y + G ++ A F+
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMIS-----CYVQNGDITMARRLFDAMPS 155
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+V S+N +L Y L++ AR LF+++P+ +LVS+ +IS Y + A +F M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN-GF 179
+ D + ++A NL +++ L LA+ GF+ + ++L YSR+
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ----EMVSLQLGL--DMYT 233
LD A + F M E ++E +W++M+ A A+ +++ + ++ + L +
Sbjct: 276 LDTAIKFFESMIE-RNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQ 334
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
I A E + + + + +G+ QN G + + ++F+++
Sbjct: 335 CGRIDDARILFEQIPEPIVVSWNALITGYMQN---------------GMVNEAKELFDKM 379
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
P + + W MI+GY+Q S++ALG ++L+R G P S + ACSN+ + G
Sbjct: 380 PFRNTISWAGMIAGYAQNGR-SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
Q+H+L +K+ + N + NAL+ MY KC N+E AR++F RM + VS NS +A Q
Sbjct: 439 TQVHSLAVKVGCQFNSFAC-NALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+ + EA F+ ML + ++++ +++SA AH + E F K MF E E
Sbjct: 498 NDLLDEARNTFDNMLSRD----DVSWTTIISAYAHAEQSNEAMGAF---KTMF-CEHELP 549
Query: 473 HYSCMIDLLGRAGKL 487
+ + LLG G L
Sbjct: 550 NSPILTILLGVCGSL 564
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 198/419 (47%), Gaps = 24/419 (5%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
+ G + A F+ ++ ++N +++AY +AR L+D I ++ + L+S
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS 165
Y G A +F M E+ +T + + ++ + ++L FD S
Sbjct: 106 YGRLGRVLEARRVFDGMLER--NTVAWNAMISCYVQNGDITMARRL--------FDAMPS 155
Query: 166 VN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
+ NS+LT Y + + +A+ +F +M E ++ VSW M+ YG+ +A +F +
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPE-RNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M L D AS L+A L +L +K+GF ++ IG+ ++++Y++ +
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
+ +K FE + + + W+TMI+ S D A+ +++ P S C
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRI-DAAIAVYER------DPVK-SIACRT 326
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+ + L+ G+ A + +I + NAL+ Y + G + +A+ LFD+MP NT+
Sbjct: 327 ALITGLA-QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
S MIAGYAQ+G EAL L + + + + P+ + S+ AC++ + G + S+
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
+ G + +AR +FD MP + ++ NSMI+ Y +G+ A L++ + N+ I
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI---- 101
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+LS G+V E ++ F M E ++ MI + G +T A RL +AMP
Sbjct: 102 LLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARRLFDAMP 154
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/738 (34%), Positives = 378/738 (51%), Gaps = 104/738 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK-CGCLSAAHHAFNQT 60
F L G +L +SL L LK + + +YS+ L A F
Sbjct: 227 FASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N ++++ ++AA + RI +A ++++ P + LI+ A CG + A LF+
Sbjct: 287 IERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFE 346
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ E I S N +L+T Y +NG +
Sbjct: 347 QIPEP------------IVVSWN-------------------------ALITGYMQNGMV 369
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+EAK +F +M ++ +SW M+ Y Q+ EAL L QE+ + + +L SI A
Sbjct: 370 NEAKELFDKM-PFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFA 428
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+++ L G Q H+ +K G NS + LI +Y KC +M +VF + D+V
Sbjct: 429 CSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCR-NMEYARQVFSRMVTKDIVS 487
Query: 301 WN-------------------------------TMISGYSQKEEYSDQALGCFKKLNRVG 329
WN T+IS Y+ E+ S++A+G FK +
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQ-SNEAMGAFKTMFCEH 546
Query: 330 YHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ ++ C +L S +G+QIH + IK+ + S I V NAL++MY KCG D+
Sbjct: 547 ELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELI-VANALISMYFKCG-CADS 604
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RR+FD M E + + N++I GYAQHG+G EA+++++ M + P +TFV +L+AC+H
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHA 664
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----- 503
G V EG K+F M +G P EHY+CM+DLLGR G + AE+ I MP P +
Sbjct: 665 GLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSA 724
Query: 504 ------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
I +AA ++EPSNA YVML+NIY++ G W EVA +R++M+ +GV
Sbjct: 725 LLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGV 784
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
K+PG SW ++K +MH FV D H I+EI LEE+ +K GYVPD
Sbjct: 785 IKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDE 844
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
KE L++HSEKLAVA+ LL+T G PI ++KNLRICGDCH IKF+S + R+I +RD
Sbjct: 845 EQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRD 904
Query: 660 TYRFHCFKDGRCSCGDYW 677
RFH F++G CSC D+W
Sbjct: 905 GNRFHHFRNGSCSCEDFW 922
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 239/495 (48%), Gaps = 43/495 (8%)
Query: 5 VLKTCVGR--RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+L + GR R L + + +N V ++A +S Y + G ++ A F+
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMIS-----CYVQNGDITMARRLFDAMPS 155
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+V S+N +L Y L++ AR LF+++P+ +LVS+ +IS Y + A +F M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN-GF 179
+ D + ++A NL +++ L LA+ GF+ + ++L YSR+
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ----EMVSLQLGL--DMYT 233
LD A + F M E ++E +W++M+ A A+ +++ + ++ + L +
Sbjct: 276 LDTAIKFFESMIE-RNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQ 334
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
I A E + + + + +G+ QN G + + ++F+++
Sbjct: 335 CGRIDDARILFEQIPEPIVVSWNALITGYMQN---------------GMVNEAKELFDKM 379
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
P + + W MI+GY+Q S++ALG ++L+R G P S + ACSN+ + G
Sbjct: 380 PFRNTISWAGMIAGYAQNGR-SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
Q+H+L +K+ + N + NAL+ MY KC N+E AR++F RM + VS NS +A Q
Sbjct: 439 TQVHSLAVKVGCQFNSFAC-NALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+ + EA F+ ML + ++++ +++SA AH + E F K MF E E
Sbjct: 498 NDLLDEARNTFDNMLSRD----DVSWTTIISAYAHAEQSNEAMGAF---KTMF-CEHELP 549
Query: 473 HYSCMIDLLGRAGKL 487
+ + LLG G L
Sbjct: 550 NSPILTILLGVCGSL 564
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 191/423 (45%), Gaps = 47/423 (11%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV 97
N I Y G AA ++ N+ + +LL+ Y R R+ AR++FD + + + V
Sbjct: 69 NSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTV 128
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY 157
++N +IS Y GD A LF M +
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSRD------------------------------- 157
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
S NS+LT Y + + +A+ +F +M E ++ VSW M+ YG+ +A
Sbjct: 158 ------VSSWNSMLTGYCHSLQMVDARNLFEKMPE-RNLVSWTVMISGYGRIENHGKAWD 210
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
+F +M L D AS L+A L +L +K+GF ++ IG+ ++++Y+
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
+ + + +K FE + + + W+TMI+ S D A+ +++ P S
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRI-DAAIAVYER------DPVK-SI 322
Query: 338 VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
C + + L+ G+ A + +I + NAL+ Y + G + +A+ LFD+MP
Sbjct: 323 ACRTALITGLA-QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPF 381
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
NT+S MIAGYAQ+G EAL L + + + + P+ + S+ AC++ + G +
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQV 441
Query: 458 FSM 460
S+
Sbjct: 442 HSL 444
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 183/411 (44%), Gaps = 84/411 (20%)
Query: 76 ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
R R+ AR++FD +P+ D++++N++ISAY G ++A L+ + T LS
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVN-NSLLTCYSRNGFLDEAKRVFYEMGEIK 194
G L + L ++ G +V N++++CY +NG + A+R+F M +
Sbjct: 105 GYGR-------LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS-R 156
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL--------------------------- 227
D SWNSM+ Y + ++A LF++M L
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 228 --GL--DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
GL D AS L+A L +L +K+GF ++ IG+ ++++Y++ + +
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVL 276
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+K FE + + + W+TMI+ S D A+ +++
Sbjct: 277 DTAIKFFESMIERNEYTWSTMIAALSHGGRI-DAAIAVYER------------------- 316
Query: 344 CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
P ++S I+ AL+ ++CG ++DAR LF+++PE VS
Sbjct: 317 ----DP--------------VKS--IACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
N++I GY Q+G+ EA LF+ M N I++ +++ A G+ E
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRN----TISWAGMIAGYAQNGRSEEA 403
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/646 (37%), Positives = 367/646 (56%), Gaps = 42/646 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I A ++F + D +S+NT+I+A G E+A+ + MR+
Sbjct: 422 NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 481
Query: 129 TDGFT-LSGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
F +SGL + + L +QLHC A+ G SV+N+L+ Y G + E +
Sbjct: 482 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEI 541
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M D VSWNS++ + + E++Q+F M+ L + T + L A T L
Sbjct: 542 FNSMSA-HDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLS 600
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
L G Q H+ ++K G +++ + + L+ YAK SGD+ C ++F + + D + WN+M
Sbjct: 601 VLELGKQIHSVMLKHGVTEDNAVDNALMSCYAK-SGDVDSCERLFSRMSGRRDAISWNSM 659
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY + +A+ C + D C+F V++AC++++ G ++HA ++
Sbjct: 660 ISGYIYNG-HLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSH 718
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG ++ A ++F M + N S NSMI+GYA+HG+G +AL +F
Sbjct: 719 LESD-VVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIF 777
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E M E+ P ++TFVSVLSAC+H G V G YF +M+D +G P EHYSC+IDLLGR
Sbjct: 778 EEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCVIDLLGR 836
Query: 484 AGKLTDAERLIEAMPFNPGSI--------------------ALKAANHFLQLEPSNAVPY 523
AG+L + ++ MP P ++ +A+ L+LEP N V Y
Sbjct: 837 AGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNY 896
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+ + +AA G+WE+ A R M+ V+K+ G SW+ + +H F+A D SHP KEI+
Sbjct: 897 VLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIY 956
Query: 584 NYLEEMSRKMKQAGYVPDKEKRL------------VHHSEKLAVAFGLLSTSYGEPILVM 631
L + +K++ AGYVP E L +HSEKLAVAF L +S G PI +M
Sbjct: 957 EKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIM 1016
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH A ++IS I GR+I +RD+ RFH FKDG+CSCGDYW
Sbjct: 1017 KNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 226/455 (49%), Gaps = 29/455 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM- 122
++F N L+ +YA+ R+ +AR++FD +P + VS+ LIS + G E A LF+ M
Sbjct: 99 DLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAML 158
Query: 123 ------REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
R F T G L + + L Q+H L F +V N+L++ Y
Sbjct: 159 REGPGCRPTSF-TFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGS 217
Query: 177 --NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM--- 231
G A+RVF + ++D ++WN+++ Y + + + LF+ M G+++
Sbjct: 218 CSVGPPILAQRVF-DTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPT 276
Query: 232 -YTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+T S++TA T L GL Q ++KSG + ++GS L+ +A+ G + +
Sbjct: 277 EHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFAR-HGMLDEAKD 334
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
++ + + + V N +I+G K+++ + A F D ++V ++SA + S
Sbjct: 335 IYLGLKERNAVTLNGLIAGLV-KQQHGEAAAEIFMGARDSAAVNVD-TYVVLLSAIAEFS 392
Query: 349 PS-----LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ G+++HA ++ +I+V+N LV MY+KCG ++ A R+F M + +S
Sbjct: 393 TAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISW 452
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMK 462
N++I Q+G A+ + M + +I P+N +S LS+CA G +A GQ+ + +K
Sbjct: 453 NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK 512
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+G + + ++ + G G++++ + +M
Sbjct: 513 --WGLYLDTSVSNALVKMYGECGRMSECWEIFNSM 545
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 37/324 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L L GK +H++ LK H +
Sbjct: 588 TFVNFLAALTPLSVLELGKQIHSVMLK---------------------------HGVTED 620
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLF 119
+ N L++ YA+ + S +LF ++ + D +S+N++IS Y G + A+
Sbjct: 621 NAVD----NALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCV 676
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M D T S ++ A ++ L + ++H + + V ++L+ YS+
Sbjct: 677 CLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKC 736
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +D A +VF+ M + K+E SWNSM+ Y +H G +AL++F+EM D T S+
Sbjct: 737 GRIDYASKVFHSMSQ-KNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSV 795
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
L+A + + GL + + G S +IDL + +G++ + + +P +P
Sbjct: 796 LSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGR-AGELDKIQEYMKRMPMKP 854
Query: 297 DLVLWNTMISGYSQKEEYSDQALG 320
+ ++W T++ Q + + LG
Sbjct: 855 NTLIWRTVLVACQQSKHRAKIDLG 878
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 43/232 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G +HA L++ + + + + +YSKCG + A F+
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSM 749
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N FS+N +++ YAR A ++F+++ + PD V++ +++SA + G E L
Sbjct: 750 SQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGL 809
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + I +HY+ V + L R
Sbjct: 810 DYFELMED-----------------------------YGILPRIEHYSCVIDLL----GR 836
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ--HRE----GLEALQLFQEM 222
G LD+ + M + + W +++VA Q HR G EA ++ E+
Sbjct: 837 AGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLEL 888
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/657 (36%), Positives = 356/657 (54%), Gaps = 67/657 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR +FD +P P+ +N +I Y+ G SA+S++ +M E+ D +T L+ +
Sbjct: 72 ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTR 131
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ + ++LH + GF V N+L+ YS +G + A+ VF + D V+WN
Sbjct: 132 DTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVF-DRSSKGDVVTWNV 190
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Y + ++ E+++LF EM +++ TL S+L+A + L+DL G + H ++
Sbjct: 191 MISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK 250
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFE------------------------------ 291
+ + LID+YA C GDM + +F+
Sbjct: 251 IEPVRVLENALIDMYAAC-GDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYF 309
Query: 292 -EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
++P+ D V W MI GY Q + + L F+++ PD+ + V +++AC++L
Sbjct: 310 DKMPERDFVSWTAMIDGYLQVNRFK-EVLSLFREMQAANIKPDEFTMVSILTACAHLGAL 368
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG+ I A K EI+ + V NAL+ MY CGN+E A R+F+ MP + +S ++I G
Sbjct: 369 ELGEWIKAYIDKNEIKIDSF-VGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
A +G G EAL +F ML+ +I P +T + VL AC H+G V +G+K+F+ M G EP
Sbjct: 428 LAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEP 487
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHF 512
HY CM+DLLGRAG L +A +I+ MP P SI A AA
Sbjct: 488 NVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQI 547
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+LEP N YV+L NIYAA +WE++ +R+LM DRG++K PG S IE+ +H FVA
Sbjct: 548 LELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAG 607
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP KEI++ L+EMS +K AGY PD KE + HSEKLA+AFGL+
Sbjct: 608 DQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLI 667
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
S+ G I ++KNLR+C DCH K +S + RE+ VRD RFH F+ G CSC DYW
Sbjct: 668 SSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 210/485 (43%), Gaps = 89/485 (18%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G+ LH +K + ++ N I LYS G +S A F+++ +V ++NV+++ Y R
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197
Query: 78 QLRIASARQLFDQIP---------------------------------------QPDLVS 98
+ + +LFD++ +P V
Sbjct: 198 SKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVL 257
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC 158
N LI YA CGD ++AL +F +M+ + D +T AI
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSR--DVISWT---------------------AIVT 294
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
GF + V A+ F +M E +D VSW +M+ Y Q E L L
Sbjct: 295 GFTNLGQVG--------------LARNYFDKMPE-RDFVSWTAMIDGYLQVNRFKEVLSL 339
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F+EM + + D +T+ SILTA L L G A++ K+ +S +G+ LID+Y
Sbjct: 340 FREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFN 399
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G++ +++F +P D + W +I G + Y ++AL F ++ + PD+ + +
Sbjct: 400 C-GNVEKAIRIFNAMPHRDKISWTAVIFGLAIN-GYGEEALDMFSQMLKASITPDEVTCI 457
Query: 339 CVISACSNLS-PSLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
V+ AC++ GK+ A +T + I N ++ +V + + G+L++A + MP
Sbjct: 458 GVLCACTHSGMVDKGKKFFARMTTQHGIEPN-VAHYGCMVDLLGRAGHLKEAHEVIKNMP 516
Query: 397 -EHNTVSLNSMIAGYAQHG----IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
+ N++ S++ H M A ++ E LE + ++ +AC K+
Sbjct: 517 VKPNSIVWGSLLGACRVHRDEEMAEMAAQQILE--LEPENGAVYVLLCNIYAACNRWEKL 574
Query: 452 AEGQK 456
E +K
Sbjct: 575 HEVRK 579
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 14/327 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C +DL GK +H Y+K+L + L N I +Y+ CG + A F+
Sbjct: 222 TLVSVLSACSKLKDLNVGKRVHR-YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDN 280
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ +V S+ ++ + ++ AR FD++P+ D VS+ +I Y + LSLF
Sbjct: 281 MKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLF 340
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHY---ASVNNSLLTCYSR 176
++M+ D FT+ ++TA + +L ++ + Y + + V N+L+ Y
Sbjct: 341 REMQAANIKPDEFTMVSILTACA-HLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFN 399
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A R+F M +D++SW +++ + G EAL +F +M+ + D T
Sbjct: 400 CGNVEKAIRIFNAMPH-RDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIG 458
Query: 237 ILTAFTSLEDLVGGLQFHAHL-IKSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L A T + G +F A + + G N +H G ++DL + +G +++ +V + +P
Sbjct: 459 VLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGC-MVDLLGR-AGHLKEAHEVIKNMP 516
Query: 295 -QPDLVLWNTMISG--YSQKEEYSDQA 318
+P+ ++W +++ + EE ++ A
Sbjct: 517 VKPNSIVWGSLLGACRVHRDEEMAEMA 543
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/639 (35%), Positives = 356/639 (55%), Gaps = 36/639 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL YA+ I +A F + ++V +N ++ AY D ++ +F+ M+ + +
Sbjct: 413 LLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 472
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ +L L +Q+H I F A V + L+ Y++ G LD A +
Sbjct: 473 QYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILI 532
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
KD VSW +M+ Y Q+ +AL F++M+ + D L + ++A L+ L
Sbjct: 533 RFAG-KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 591
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q HA SGF + + L+ LY+KC G++ + FE+ D + WN ++SG+
Sbjct: 592 EGQQIHAQACVSGFSSDLPFQNALVTLYSKC-GNIEEAYLAFEQTEAGDNIAWNALVSGF 650
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q +++AL F ++NR G ++ +F + A S + GKQ+HA+ K S
Sbjct: 651 QQSGN-NEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS- 708
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
V NA+++MY+KCG++ DA++ F + N VS N+MI Y++HG G EAL F+ M+
Sbjct: 709 ETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMI 768
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+N+ P ++T V VLSAC+H G V +G +YF M +G P+ EHY C++D+L RAG L
Sbjct: 769 HSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLL 828
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
+ A+ I MP P ++ + AA+H L+LEP ++ YV+L+N+Y
Sbjct: 829 SRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 888
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A KW+ R+ M+++GV+K+PG SWIEVK +H F D +HP+ EIH Y ++++
Sbjct: 889 AVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLT 948
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++ + GYV D K+ + HSEKLA++FGLLS PI VMKNLR+C
Sbjct: 949 KRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCN 1008
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH+ IKF+S ++ REI VRD YRFH F+ G CSC DYW
Sbjct: 1009 DCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 256/536 (47%), Gaps = 57/536 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C L G+ LH L LK Y+ N + LY G L +A H
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH------ 327
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+F + Q D V+YNTLI+ + CG E A+ LFK
Sbjct: 328 -------------------------IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + D TL+ L+ A S++ L +QLH GF + +LL Y++
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSD 422
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A F E E+++ V WN M+VAYG + + ++F++M ++ + YT SIL
Sbjct: 423 IETALNYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 481
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
L DL G Q H+ +IK+ F N+++ S LID+YAK G + + D+V
Sbjct: 482 TCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKL-GKLDTAWDILIRFAGKDVV 540
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W TMI+GY+Q + D+AL F+++ G D+ +SAC+ L G+QIHA
Sbjct: 541 SWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 599
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ S+ + NALV +YSKCGN+E+A F++ + ++ N++++G+ Q G E
Sbjct: 600 AC-VSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 658
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
ALR+F M I N TF S + A + T + +G++ +++ G++ E E + +I
Sbjct: 659 ALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNAII 717
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ + G ++DA++ FL+L N V + + N Y+ G
Sbjct: 718 SMYAKCGSISDAKK------------------QFLELSMKNEVSWNAMINAYSKHG 755
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 227/486 (46%), Gaps = 27/486 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL Y + + A ++FD++P+ + ++N +I A + LF M + +
Sbjct: 109 LLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPN 168
Query: 131 GFTLSGLITA---SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
T SG++ A S +++Q+H IY G V N L+ YSRNGF+D A+RVF
Sbjct: 169 EGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVF 228
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ +KD SW +M+ ++ +EA++LF +M L + Y +S+L+A +E L
Sbjct: 229 DGL-YLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 287
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q H ++K GF ++++ + L+ LY G + +F + Q D V +NT+I+G
Sbjct: 288 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL-GSLISAEHIFSNMSQRDAVTYNTLING 346
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRS 366
SQ Y ++A+ FK++ G PD + ++ ACS+ G+Q+HA T K+ S
Sbjct: 347 LSQC-GYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFAS 405
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
N + AL+ +Y+KC ++E A F N V N M+ Y + R+F M
Sbjct: 406 ND-KIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 464
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
I P T+ S+L C G + G++ S + F+ S +ID+ + GK
Sbjct: 465 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT-SFQLNAYVCSVLIDMYAKLGK 523
Query: 487 LTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
L A ++ ++ + V + + Y ++ T R M
Sbjct: 524 LDTAWDIL------------------IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 565
Query: 547 RDRGVQ 552
DRG++
Sbjct: 566 LDRGIR 571
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 151/573 (26%), Positives = 261/573 (45%), Gaps = 43/573 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y+R + AR++FD + D S+ +IS + A+ LF DM
Sbjct: 209 NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ S +++A +L + +QLH L + GF V N+L++ Y G L A+ +
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHI 328
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + +D V++N+++ Q G +A++LF+ M L D TLAS++ A +S
Sbjct: 329 FSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGT 387
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA+ K GF N I L++LYAKCS D+ + F E ++VLWN M+
Sbjct: 388 LFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS-DIETALNYFLETEVENVVLWNVMLV 446
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y ++ + + F+++ P+ ++ ++ C L LG+QIH+ IK +
Sbjct: 447 AYGLLDDLRN-SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQ 505
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N V + L+ MY+K G L+ A + R + VS +MIAGY Q+ +AL F
Sbjct: 506 LNAY-VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 564
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML+ I + + +SACA + EGQ+ + + GF + + ++ L + G
Sbjct: 565 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSKCG 623
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ +A E Q E + + + L + + SG EE +
Sbjct: 624 NIEEAYLAFE------------------QTEAGDNIAWNALVSGFQQSGNNEEALRVFAR 665
Query: 546 MRDRGVQKKPGFSW------------IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
M G+ F++ ++ KQ+H + + G + E+ N + M K
Sbjct: 666 MNREGIDSN-NFTFGSAVKAASETANMKQGKQVHAVITKTG-YDSETEVCNAIISMYAK- 722
Query: 594 KQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
G + D +K+ + S K V++ + +Y +
Sbjct: 723 --CGSISDAKKQFLELSMKNEVSWNAMINAYSK 753
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 36/349 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LKTC+ DL G+ +H+ +K +AY+ + I +Y+K G L A
Sbjct: 475 TYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTA------- 527
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++L+ + D+VS+ T+I+ Y + AL+ F+
Sbjct: 528 -------WDILI-----------------RFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 563
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ +D L+ ++A + L +Q+H A GF N+L+T YS+ G
Sbjct: 564 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCG 623
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA F E E D ++WN++V + Q EAL++F M + + +T S +
Sbjct: 624 NIEEAYLAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAV 682
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + ++ G Q HA + K+G+ + + + +I +YAKC G + D K F E+ +
Sbjct: 683 KAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKC-GSISDAKKQFLELSMKNE 741
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
V WN MI+ YS K + +AL F ++ P+ + V V+SACS++
Sbjct: 742 VSWNAMINAYS-KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 789
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 42/414 (10%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
++LH + GFD+ A ++ LL Y G LD A +VF EM E + +WN M+
Sbjct: 88 RKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPE-RTIFTWNKMIKELAS 146
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASIL-------TAFTSLEDLVGGLQFHAHLIKSG 261
+ LF MV+ + + T + +L AF +E Q HA +I G
Sbjct: 147 RSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVE------QIHARIIYQG 200
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+++ + + LIDLY++ +G + +VF+ + D W MISG S K E +A+
Sbjct: 201 LGKSTIVCNPLIDLYSR-NGFVDRARRVFDGLYLKDHSSWVAMISGLS-KNECEVEAIRL 258
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F + +G P +F V+SAC + S +G+Q+H L +K+ S+ V NALV++Y
Sbjct: 259 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY-VCNALVSLYF 317
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
G+L A +F M + + V+ N++I G +Q G G +A+ LF+ M + P + T S
Sbjct: 318 HLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLAS 377
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
++ AC+ G + GQ+ + + GF + +++L K +D E
Sbjct: 378 LVVACSSDGTLFSGQQLHAYTTKL-GFASNDKIEGALLNLY---AKCSDIE--------- 424
Query: 501 PGSIALKAANHFLQLEPSNAVPY-VMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A N+FL+ E N V + VML A G +++ R+ R +++
Sbjct: 425 ------TALNYFLETEVENVVLWNVML----VAYGLLDDLRNSFRIFRQMQIEE 468
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 24/305 (7%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + H+ ++K GF N+ + L+D Y GD+ +KVF+E+P+ + WN MI +
Sbjct: 87 GRKLHSQILKLGFDNNACLSEKLLDFYL-FKGDLDGALKVFDEMPERTIFTWNKMIKELA 145
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG--KQIHALTIKIEIRSN 367
+ S + F ++ P++ +F V+ AC S + +QIHA I + +
Sbjct: 146 SRS-LSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKS 204
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
I V N L+ +YS+ G ++ ARR+FD + + S +MI+G +++ +EA+RLF M
Sbjct: 205 TI-VCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMY 263
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
I PT F SVLSAC + G++ ++ + GF + + ++ L G L
Sbjct: 264 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGSL 322
Query: 488 TDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
AE + F + +AV Y L N + G E+ + + M+
Sbjct: 323 ISAEHI------------------FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQ 364
Query: 548 DRGVQ 552
G++
Sbjct: 365 LDGLE 369
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K ++ GK +HA+ K + N I +Y+KCG +S A F +
Sbjct: 677 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLEL 736
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
N S+N ++ AY++ + A FDQ+ +P+ V+ ++SA + G + +
Sbjct: 737 SMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 796
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M T GL + +C++ L +R
Sbjct: 797 EYFESMN---------TEYGLAPKPEHYVCVVDML-----------------------TR 824
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G L AK EM D + W +++ A H+
Sbjct: 825 AGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK 858
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/658 (36%), Positives = 367/658 (55%), Gaps = 37/658 (5%)
Query: 54 HHAFNQTQHA-NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
H +++H+ +VF L+ Y + + AR++FD +P + ++N++ISAY+ +
Sbjct: 33 HSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERS 92
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSL 170
A +F+ M+ + D T ++ A N NL K + F+ V +L
Sbjct: 93 GEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTAL 152
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+T Y+R + A +VF M + K+ ++W++++ A+ H EAL+ F+ M + +
Sbjct: 153 ITMYARCRSPENAAQVFGRMKQ-KNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPN 211
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMKV 289
T S+L FT+ L + H + + G + + + L+++Y +C +G++ +
Sbjct: 212 RVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVI 271
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLS 348
+E+ + + WN +I+GY+ S +AL +++L D +F+ V++AC S+ S
Sbjct: 272 LQEMDEQQITAWNVLINGYTLHGR-SREALETYQRLQLEAIPVDKVTFISVLNACTSSTS 330
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+ GK IH+ ++ + S+ I V NAL MYSKCG++E+ARR+FD MP + VS N M+
Sbjct: 331 LAEGKMIHSNAVECGLDSDVI-VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQ 389
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
YAQHG E L+L M + + ITFVSVLS+C+H G +AEG +YF + G E
Sbjct: 390 AYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 449
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANH 511
+ EHY C++DLLGRAGKL +AE+ I MP P + AA
Sbjct: 450 VKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARK 509
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L+L+P N+ V+L+NIY+ G W+ A +RR M R V+K PG S I+VK ++H F
Sbjct: 510 LLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRV 569
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
D SHP EI++ +EE+ M++AGYVPD KE L +HSEKLA+AFGL
Sbjct: 570 RDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGL 629
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ST + + KNLR+C DCH A KFIS I GREI VRD +RFH F+DG CSC DYW
Sbjct: 630 ISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 34/214 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L GK +H+ ++ + + N +YSKCG + A F+
Sbjct: 317 TFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFD-- 374
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P VS+N ++ AYA G++E L L +
Sbjct: 375 -----------------------------SMPIRSAVSWNGMLQAYAQHGESEEVLKLIR 405
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M ++ +G T ++++ S+ + + H L G + L+ R
Sbjct: 406 KMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRA 465
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
G L EA++ +M + V+W S++ A H++
Sbjct: 466 GKLQEAEKYISKMPSEPEIVTWASLLGACRVHKD 499
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/635 (39%), Positives = 351/635 (55%), Gaps = 64/635 (10%)
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL---------CLI 148
S+ I A GD A++LF MR S ++T+ L L
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRAS---DPAAACSSVLTSLPGALKSCAALGLRALG 77
Query: 149 KQLHCLAIYCGF--DHYASVNNSLLTCYSR-----------NG---FLDEAKRVFYEMGE 192
LH LA+ G D +A+ N+LL Y + +G L+ ++VF EM E
Sbjct: 78 ASLHALALRSGAFADRFAA--NALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPE 135
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
KD VSWN++V+ + EAL L +EM D +TL+S+L F D+ G++
Sbjct: 136 -KDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGME 194
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
H ++GFH + +GS LID+YA C+ +KVF+ +P D +LWN+M++G +Q
Sbjct: 195 LHGFATRNGFHDDVFVGSSLIDMYANCT-RTDYSVKVFDNLPVRDAILWNSMLAGCAQNG 253
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISV 371
D+ALG F+++ G P +F +I AC NL S LGKQ+HA I+ N + +
Sbjct: 254 SV-DEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGN-VFI 311
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+++L+ MY KCGN+ ARR+FDR+ + VS +MI G+A HG EAL LF+ M N+
Sbjct: 312 SSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNL 371
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P +ITF++VL+AC+H G V +G KYF+ M D +G P EH++ + D LGR GKL +A
Sbjct: 372 KPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAY 431
Query: 492 RLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASG 534
I M P + +A + A LEP + +++L+N Y++SG
Sbjct: 432 NFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSG 491
Query: 535 KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
+W E A +R+ MR +G+QK+P SWIEVK + HVFVA D SHP + I + L S +M
Sbjct: 492 RWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMV 551
Query: 595 QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHN 642
+ GYVP+ K L HSEKLA+ FG++ST G I VMKNLR+C DCH
Sbjct: 552 RQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHT 611
Query: 643 AIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KFIS I GREI +RD RFH FKDG CSCGD+W
Sbjct: 612 VTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C L+ GK LHA ++ + ++S+ I +Y KCG +S A F++
Sbjct: 276 TFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRI 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
Q ++ S+ ++ +A A LFD++ +P+ +++ +++A + G +
Sbjct: 336 QSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGW 395
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + I +H+A++ ++L R
Sbjct: 396 KYFNSMSDH----------------------------YGIVPSLEHHAALADTL----GR 423
Query: 177 NGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G L+EA M +IK S W++++ A H+ + A ++ +++ L+
Sbjct: 424 PGKLEEAYNFISGM-KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLE 473
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/629 (36%), Positives = 358/629 (56%), Gaps = 37/629 (5%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I AR++FD+ P+P + +N +I Y+ A+ ++ M+ + DGFTL ++ A
Sbjct: 119 IGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKA 178
Query: 141 SSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S L + K++H GF+ V N L+ Y++ G +++A+ VF + + ++ VS
Sbjct: 179 CSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDD-RNIVS 237
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
W SM+ YGQ+ +EAL++F +M + D L S+L A+T +EDL G H ++
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
K G + L +YAKC G + F+++ P++++WN MISGY+ K Y+++A
Sbjct: 298 KMGLEFEPDLLISLTAMYAKC-GQVMVARSFFDQMEIPNVMMWNAMISGYA-KNGYTNEA 355
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVA 377
+G F+++ D + I AC+ + S L K + K E R N + VN AL+
Sbjct: 356 VGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR-NDVFVNTALID 414
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
M++KCG+++ AR +FDR + + V ++MI GY HG G +A+ LF M + + P ++T
Sbjct: 415 MFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVT 474
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FV +L+AC H+G V EG + F MK +G E +HY+C++DLLGR+G L +A I M
Sbjct: 475 FVGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTM 533
Query: 498 PFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
P PG ++ AA L+P N YV L+N+YA+S W+ VA
Sbjct: 534 PIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVA 593
Query: 541 TIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
+R LMR++G+ K G+S IE+ ++ F D SHP KEI LE + R++K+AG++P
Sbjct: 594 KVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIP 653
Query: 601 ------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+KE+ L +HSE+LA+A+GL+ST+ G + + KNLR C +CH+A K IS
Sbjct: 654 HIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLIS 713
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ REI VRD RFH FK+G CSC DYW
Sbjct: 714 KLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 133/247 (53%), Gaps = 5/247 (2%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HA L+ SG ++ + + ++ G++ KVF+E P+P + LWN +I GYS
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNI-GEIGYARKVFDEFPEPSVFLWNAIIRGYSSH 147
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+ D A+ + ++ G +PD + CV+ ACS + +GK++H ++ S+ +
Sbjct: 148 NFFGD-AIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD-VF 205
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N LVA+Y+KCG +E AR +F+ + + N VS SMI+GY Q+G+ MEALR+F M + N
Sbjct: 206 VQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRN 265
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P I VSVL A + +G+ + M G E E + + + + G++ A
Sbjct: 266 VKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKM-GLEFEPDLLISLTAMYAKCGQVMVA 324
Query: 491 ERLIEAM 497
+ M
Sbjct: 325 RSFFDQM 331
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 173/352 (49%), Gaps = 11/352 (3%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF N L+A YA+ R+ AR +F+ + ++VS+ ++IS Y G AL +F M
Sbjct: 202 SDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQM 261
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R++ D L ++ A ++ +L K +H + G + + SL Y++ G +
Sbjct: 262 RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQV 321
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A R F++ EI + + WN+M+ Y ++ EA+ LFQEM+S + D T+ S + A
Sbjct: 322 MVA-RSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILA 380
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L ++ K+ + + + + LID++AKC G + +VF+ D+V+
Sbjct: 381 CAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKC-GSVDLAREVFDRTLDKDVVV 439
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHAL 358
W+ MI GY D A+ F + + G P+D +FV +++AC S L + H++
Sbjct: 440 WSAMIVGYGLHGRGQD-AIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM 498
Query: 359 T-IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
IE R + +V + + G+L +A MP VS+ + G
Sbjct: 499 KYYGIEARHQHYA---CVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 58/315 (18%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL+ DL GKS+H +K + F L +Y+KCG + A F+Q + N
Sbjct: 276 VLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPN 335
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V +N + IS YA G T A+ LF++M
Sbjct: 336 VMMWNAM-------------------------------ISGYAKNGYTNEAVGLFQEMIS 364
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
K TD T+ I A + +L L K + + + VN +L+ +++ G +D
Sbjct: 365 KNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDL 424
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF + KD V W++M+V YG H G +A+ LF M + + T +LTA
Sbjct: 425 AREVFDRTLD-KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACN 483
Query: 243 SLEDLVGGLQFHAHLIKSG---FHQNSHIG--------SGLIDLYAKCSGDMRDCMKVFE 291
H+ L++ G FH + G + ++DL + SG + +
Sbjct: 484 -----------HSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGR-SGHLNEAYDFIT 531
Query: 292 EIP-QPDLVLWNTMI 305
+P +P + +W ++
Sbjct: 532 TMPIEPGVSVWGALL 546
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIHA + + + V + A ++ G + AR++FD PE + N++I GY+ H
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWN-IGEIGYARKVFDEFPEPSVFLWNAIIRGYSSH 147
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFE 468
+A+ ++ M + + P T VL AC+ GK GQ + GFE
Sbjct: 148 NFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF------RLGFE 201
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLAN 528
+ + ++ L + G++ A + E L+ N V + + +
Sbjct: 202 SDVFVQNGLVALYAKCGRVEQARIVFEG------------------LDDRNIVSWTSMIS 243
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
Y +G E I MR R V KP WI
Sbjct: 244 GYGQNGLPMEALRIFGQMRQRNV--KP--DWI 271
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/652 (38%), Positives = 372/652 (57%), Gaps = 42/652 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F NVL+ AY++ + A+ F +I + S+N L++AYA G A +LF M
Sbjct: 66 NTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMC 125
Query: 124 EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + TLS + A ++ NL L ++L+ L + + V +SL+T Y R ++
Sbjct: 126 SQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIE 185
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+R F E KD V W +M+ AY + AL+L + M + L + T S+L A
Sbjct: 186 EAERAFDRSPE-KDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDAC 244
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSG-LIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S DL G+ FH G ++S + +G L++LY KC G + D +V + +P V
Sbjct: 245 ASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKC-GRVDDARRVLDAMPVRTSVS 303
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W MI+ Y+Q + +A+ F+ ++ G P D + + V+ +C+ L SLGK+IHA
Sbjct: 304 WTAMIAAYAQNGNAA-EAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARI 362
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIGM 417
S + + NA++ MY KCGNLE AR +F+ +P + V+ +MI YAQ+G+G
Sbjct: 363 RSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGE 422
Query: 418 EALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EA+ LF+ ML + P +TF+SVL AC+H G++ + ++F M FG P G+HY C
Sbjct: 423 EAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCC 482
Query: 477 MIDLLGRAGKLTDAERLI-----------------EAMPFNPGSI--ALKAANHFLQLEP 517
++DLLGRAG+L +AE+L+ A N G + + +AA +LEP
Sbjct: 483 LVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMN-GDLERSQRAAKRVSELEP 541
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N V+L+N+YAA G+ +VA IR M+ GV+K G SWIE+ ++H F+ D SHP
Sbjct: 542 ENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHP 601
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD---------KEKR---LVHHSEKLAVAFGLLSTSYG 625
EI++ LE + R++K+AGYVPD +EK+ L +HSE+LA+A G++ST G
Sbjct: 602 RKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPG 661
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ V+KNLR+C DCH A KFIS I GR+I VRDT RFH FKDG CSCGDYW
Sbjct: 662 TTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 177/358 (49%), Gaps = 4/358 (1%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+++LH D + N L+ YS++G L A+ F + + + SWN ++ AY
Sbjct: 51 VRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRI-TLHNAHSWNILMAAYA 109
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
Q+ A LF M S + + TL++ L A T+ +L G + + + +SH
Sbjct: 110 QNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSH 169
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ S LI +Y +C ++ + + F+ P+ D+V W MIS Y+ S +AL ++++
Sbjct: 170 VESSLITMYGRCR-EIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTS-RALELVRRMDL 227
Query: 328 VGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G ++V ++ AC S + G H I + + V LV +Y KCG ++
Sbjct: 228 EGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVD 287
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
DARR+ D MP +VS +MIA YAQ+G EA+ LF+ M P++IT +SV+ +CA
Sbjct: 288 DARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCA 347
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
G ++ G++ + ++ F + +I + G+ G L A + E +P S+
Sbjct: 348 VLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSV 405
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T+ +L C DL G + H L S ++ + LY KCG
Sbjct: 236 TYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCG----------- 284
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
R+ AR++ D +P VS+ +I+AYA G+ A++LF
Sbjct: 285 --------------------RVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLF 324
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHC-LAIYCGFDHYASVNNSLLTCYSR 176
+ M + + TL ++ + + L L K++H + F + N+++T Y +
Sbjct: 325 QCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGK 384
Query: 177 NGFLDEAKRVFYEMG-EIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
G L+ A+ VF + + V+W +M+ AY Q+ G EA++LFQEM+
Sbjct: 385 CGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEML 432
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/680 (34%), Positives = 374/680 (55%), Gaps = 49/680 (7%)
Query: 30 VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
+ ++ L+NH K L A F++ N+ + ++A Y R R+ A +LFD
Sbjct: 13 LSYTTSLANHL-----KNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFD 67
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--L 147
++ D+VS+N++I DCG+ A LF +M EK + ++G + L L
Sbjct: 68 RMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRL 127
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+H + + N+++ Y NG ++E R+F EM ++D +SW SM+
Sbjct: 128 FLDMHVKDV--------AAWNAMVHGYFENGRVEEGVRLFEEM-PVRDVISWTSMIGGLD 178
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ + EAL +F++M+ + T A +L+A + + G+Q H H++K G +
Sbjct: 179 LNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEF 238
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
I LI YA C + K+F E ++V W +++ Y ++ D AL F + +
Sbjct: 239 ISVSLITFYANCM-KIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQD-ALRVFGDMTK 296
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+G P+ +F + AC L GK+IH + IK+ + ++ + V N+LV MY++CGN+
Sbjct: 297 MGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETD-VFVGNSLVVMYTECGNVN 355
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A +F + E + VS NS+I G AQHG G+ AL F M+ + P ITF +LSAC+
Sbjct: 356 SAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACS 415
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
+G + +G+ +F + +HY+CM+D+LGR GKL +AE L+ MP S
Sbjct: 416 RSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIW 475
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A +AA H L LEP+ + YV+L+NIYA++G+W +V+ +R M+
Sbjct: 476 LALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQG 535
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
G+ K+PG SW+ ++ + H F++ D SHP+ + I+ L+ + +K+K+ GYVPD
Sbjct: 536 GLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDV 595
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KE+ L HSE+LA+AFGL+ST G I VMKNLR+CGDCH+ IK +S I GR+I V
Sbjct: 596 EDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVV 655
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD+ RFH FK+G CSC DYW
Sbjct: 656 RDSGRFHHFKNGICSCSDYW 675
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 44/217 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF LK C G L GK +H + +K + ++ N +++Y++CG +++A F
Sbjct: 305 TFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFR-- 362
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I + D+VS+N++I A G AL F
Sbjct: 363 -----------------------------NINEKDIVSWNSIIVGSAQHGFGLWALIFFN 393
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGF--------DHYASVNNSLLT 172
M + D + T +GL++A S + L+K C Y HYA + + L
Sbjct: 394 QMIRRGVDPNEITFTGLLSACSRSGMLLKG-RCFFEYISRYKSNVLRPQHYACMVDILGR 452
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
C G LDEA+ + M + + W +++ A H
Sbjct: 453 C----GKLDEAEELVRYMPVKANSMIWLALLSACRVH 485
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 89/234 (38%), Gaps = 54/234 (23%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C + G +H +K F ++S I Y+ C + AH FN+T
Sbjct: 204 TFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNET 263
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP---------------------------- 92
NV + LL AY + A ++F +
Sbjct: 264 LTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGK 323
Query: 93 -----------QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
+ D+ N+L+ Y +CG+ SA+++F+++ EK D + + +I S
Sbjct: 324 EIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEK----DIVSWNSIIVGS 379
Query: 142 SNN------LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
+ + L Q+ I G D LL+ SR+G L + R F+E
Sbjct: 380 AQHGFGLWALIFFNQM----IRRGVDPNEITFTGLLSACSRSGMLLKG-RCFFE 428
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/696 (35%), Positives = 365/696 (52%), Gaps = 71/696 (10%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
DL GK+LHA L F L N+ I Y+KCG
Sbjct: 26 DLSKGKALHA-RLITAAHFDVVLHNNLISFYAKCG------------------------- 59
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
R+ AR +FD +P + VS N L+S YA G + +L L +R F + +
Sbjct: 60 ------RVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQL---LRVVDFGMNEYV 110
Query: 134 LSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
LS ++A++N + + +Q H A+ GF V N++L Y + +++A +VF +
Sbjct: 111 LSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVS 170
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
D ++NSM+ Y + +L + + M D + ++L S++D V G
Sbjct: 171 GF-DAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGA 229
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HA +K N ++GS L+D+Y KC + D + FE +P+ ++V W +++ Y+Q
Sbjct: 230 QVHAQALKKRLELNVYVGSALVDMYGKCD-HVHDANRAFEVLPEKNVVSWTAVMTAYTQN 288
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
E Y D AL F + G P++ ++ +++C+ L+ G + A +K + +
Sbjct: 289 ELYED-ALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTG-HWDHLL 346
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V+NAL+ MYSK G++EDA R+F MP + VS N +I GYA HG+ E + F ML
Sbjct: 347 VSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAA 406
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P+ +TFV VLSACA G V E Y + M G P EHY+CM+ LL R G+L +A
Sbjct: 407 VIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEA 466
Query: 491 ERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAAS 533
ER I +A ++ A LQLEPS+ YV+L+N+YA +
Sbjct: 467 ERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKA 526
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
+W+ V +R+ MR+R V+K PG SWI V +HVF +E+ HP + +I LEE+ ++
Sbjct: 527 NRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQI 586
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K GYVP+ KE+ L++HSEKLA+AFGL+ T G I +MKNLRIC DCH
Sbjct: 587 KAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCH 646
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
AIK IS + R+I VRD RFHC + G CSC DYW
Sbjct: 647 VAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 38/248 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ VL C +D V G +HA LK + + Y+ + + +Y KC + A+ AF
Sbjct: 211 SYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVL 270
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
NV S+ ++ AY + A QLF + QP+ +Y +++ A
Sbjct: 271 PEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAG-------- 322
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L+ L T ++ C++K H +DH V+N+L+ YS+
Sbjct: 323 -----------------LAALRTGNALGACVMKTGH-------WDHLL-VSNALMNMYSK 357
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G +++A RVF M ++D VSWN ++ Y H E ++ F M+S + T
Sbjct: 358 SGSIEDAHRVFISM-PLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVG 416
Query: 237 ILTAFTSL 244
+L+A L
Sbjct: 417 VLSACAQL 424
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 88/229 (38%), Gaps = 43/229 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L +C G L TG +L A +K +SN + +YSK G + AH F
Sbjct: 312 TYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISM 371
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+V S+N+++ YA + F + P V++ ++SA A G + A
Sbjct: 372 PLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAF 431
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M ++ + I G +HY + L C R
Sbjct: 432 YYLNTMMKE----------------------------VGITPGKEHYTCMVG--LLC--R 459
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA------YG-QHREGLEALQL 218
G LDEA+R D V+W S++ + YG HR + LQL
Sbjct: 460 VGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQL 508
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 335/539 (62%), Gaps = 34/539 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N +L Y++ G L+EA+ +F +M KD VSW ++ Y Q + EAL LF +M+ L
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKM-PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGF 202
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ +TL+S+L A + G Q HA +K G+ N H+GS L+D+YA+ + MR+
Sbjct: 203 QPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA-HMREAK 261
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F + ++V WN +I+G+++K E + + F ++ R G+ P ++ V++ S+
Sbjct: 262 VIFNSLAAKNVVSWNALIAGHARKGE-GEHVMRLFXQMLRQGFEPTHFTYSSVLACASSG 320
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
S GK +HA IK + + N L+ MY+K G+++DA+++F R+ + + VS NS+I
Sbjct: 321 SLEQGKWVHAHVIKSGGQPIAY-IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 379
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+GYAQHG+G EAL+LFE ML+ + P ITF+SVL+AC+H+G + EGQ YF +MK
Sbjct: 380 SGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKI 438
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAAN 510
E + H+ ++DLLGRAG+L +A + IE MP P + + + AA
Sbjct: 439 EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAE 498
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+L+P ++ P+V+L+NIYA++G+ + A +R++M++ GV+K+P SW+E++ ++HVFV
Sbjct: 499 QIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFV 558
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFG 618
A D SHPM +EI E++S K+K+ GYVP D+E +L +HSEKLA+AF
Sbjct: 559 ANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFA 618
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+L T G I + KN+RICGDCH+A KF S + GREI VRDT RFH F G CSC DYW
Sbjct: 619 VLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 189/382 (49%), Gaps = 35/382 (9%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +L T L L G HAH+ S F + + + ++++YAKC G + + +F+++P
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-GSLEEAQDLFDKMP 167
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS--LG 352
D+V W +ISGYSQ + S +AL F K+ +G+ P++ + ++ A S PS G
Sbjct: 168 TKDMVSWTVLISGYSQSGQAS-EALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSDHHG 225
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+Q+HA ++K N + V ++L+ MY++ ++ +A+ +F+ + N VS N++IAG+A+
Sbjct: 226 RQLHAFSLKYGYDMN-VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G +RLF ML PT+ T+ SVL ACA +G + +G K+ G +P
Sbjct: 285 KGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQG-KWVHAHVIKSGGQPIAY 342
Query: 473 HYSCMIDLLGRAGKLTDAE----RLIEAMPFNPGSIALKAANHFLQLEP----------- 517
+ +ID+ ++G + DA+ RL++ + SI A H L E
Sbjct: 343 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 402
Query: 518 --SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE-DG 574
N + ++ + + SG +E LM+ IE + HV V + G
Sbjct: 403 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK---------IEAQVAHHVTVVDLLG 453
Query: 575 SHPMIKEIHNYLEEMSRKMKQA 596
+ E + ++EEM K A
Sbjct: 454 RAGRLNEANKFIEEMPIKPTAA 475
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL C L GK +HA +K+ AY+ N I +Y+K G + A F +
Sbjct: 309 TYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 367
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S+N +++ YA+ A A QLF+Q+ QP+ +++ ++++A + G +
Sbjct: 368 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 427
Query: 117 SLFKDMREKRFDT 129
F+ M++ + +
Sbjct: 428 YYFELMKKHKIEA 440
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/711 (34%), Positives = 372/711 (52%), Gaps = 107/711 (15%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+V+++C L G+ +H L + + Y+SNH +++Y KCG L
Sbjct: 39 RVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLE------------ 86
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
AR +F+ P ++ S+ LI+ A G ++ AL+LF +M
Sbjct: 87 -------------------EARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEML 127
Query: 124 EKRFDTDGFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
++ + + I A S L + LH L GF SL++ YS+ G L
Sbjct: 128 KQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSL 187
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+E+ R F M E + VSWN+M+ A+ +HR GLEAL+ Q+M L
Sbjct: 188 EESMRTFESMTE-PNAVSWNAMIAAFAEHRRGLEALRTLQKM--------------FLEG 232
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ D+V +G+ L+++YAKCSG + D F ++ +P+++
Sbjct: 233 IRACSDVV-------------------VGTTLVNMYAKCSG-LHDANAAFVKLQEPNIIT 272
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALT 359
WN +IS Y Q + +A+ F+++ +G D+ +F+ ++ AC ++ G+ IHA
Sbjct: 273 WNVLISAYVQHCCFK-EAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACV 331
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ + SN + N ++ MY KCG+L+DA +F M + + ++ N+MIA Y QHG EA
Sbjct: 332 REHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEA 391
Query: 420 LRLFEWMLETNIPPTNITFVSVLSA-CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
LR +E M E + P + T+VSV+ A CA+ G E YF M+ G P G HY CM+
Sbjct: 392 LRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMV 451
Query: 479 DLLGRAGKLTDAERLIEAMPFNP--------------------GSIALKAANHFLQLEPS 518
+ LG+AG+L+DAE LI+ MPF P G +A K A ++++P
Sbjct: 452 ESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGA---IRIDPE 508
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ YV LA I+A +G ++E + IR+LM DRG++K G S I++ ++ F A D S+P
Sbjct: 509 ASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPR 568
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
KEI + L+ + ++MK AGY PD KE L HSE+LA+AFG++STS G
Sbjct: 569 SKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGT 628
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ +MKNLR+CGDCH K S I REI VRD+ RFH FK+G CSC D+W
Sbjct: 629 PLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 187/411 (45%), Gaps = 48/411 (11%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIY 157
+TL+S G +A+ D +KR D D +I + + L +++H L
Sbjct: 7 STLLSKRQQLGQIAAAI----DALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRR 62
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G V+N L+ Y + G L+EA+ VF E K+ SW ++ QH EAL
Sbjct: 63 VGLGSDVYVSNHLVMMYGKCGSLEEARLVF-EATPAKNVFSWTILITVCAQHGRSQEALA 121
Query: 218 LFQEMVSLQLGLDMYTL---ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
LF EM L+ G+ +++ A+I E L G HA L + GF + L+
Sbjct: 122 LFYEM--LKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y+KC G + + M+ FE + +P+ V WN MI+ +++ + L + L ++
Sbjct: 180 MYSKC-GSLEESMRTFESMTEPNAVSWNAMIAAFAEHR----RGLEALRTLQKM------ 228
Query: 335 CSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
F+ I ACS+ + V LV MY+KC L DA F +
Sbjct: 229 --FLEGIRACSD----------------------VVVGTTLVNMYAKCSGLHDANAAFVK 264
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ E N ++ N +I+ Y QH EA+ LF ML + +TF+++L AC + +G
Sbjct: 265 LQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDG 324
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA 505
+ + +++ + ++++ G+ G L DAE + ++M P IA
Sbjct: 325 RAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMS-QPDVIA 374
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 152/354 (42%), Gaps = 54/354 (15%)
Query: 1 TFRQVLKTC-VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+F + C G L G++LHAL + + + + +YSKCG L + F
Sbjct: 137 SFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFES 196
Query: 60 TQHANVFSFNVLLAAYARQLR-------------------------------------IA 82
N S+N ++AA+A R +
Sbjct: 197 MTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLH 256
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
A F ++ +P+++++N LISAY + A+ LF+ M + D T ++ A
Sbjct: 257 DANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACC 316
Query: 143 NNLCLI--KQLH-CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+ L + +H C+ + ++A + N +L Y + G L +A+ +F M + D ++W
Sbjct: 317 VPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQ-PDVIAW 375
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
N+M+ AYGQH EAL+ ++ M + D YT S++ A + GL AH
Sbjct: 376 NTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCA----NAGLPEEAHAYF 431
Query: 260 SGFHQNSHIGSG------LIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
Q+ + G +++ K +G + D + + +P +PD++ W + ++
Sbjct: 432 VSMQQDHGVRPGGGHYGCMVESLGK-AGRLSDAETLIQCMPFEPDVLTWTSFLA 484
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/639 (35%), Positives = 354/639 (55%), Gaps = 36/639 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL YA+ I +A F + ++V +N ++ AY D ++ +F+ M+ + +
Sbjct: 390 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 449
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ +L L +Q+H I F A V + L+ Y++ G LD A +
Sbjct: 450 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 509
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
KD VSW +M+ Y Q+ +AL F++M+ + D L + ++A L+ L
Sbjct: 510 RFAG-KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 568
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q HA SGF + + L+ LY++C G + + FE+ D + WN ++SG+
Sbjct: 569 EGQQIHAQACVSGFSSDLPFQNALVTLYSRC-GKIEESYLAFEQTEAGDNIAWNALVSGF 627
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q +++AL F ++NR G ++ +F + A S + GKQ+HA+ K S
Sbjct: 628 QQSGN-NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS- 685
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
V NAL++MY+KCG++ DA + F + N VS N++I Y++HG G EAL F+ M+
Sbjct: 686 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 745
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+N+ P ++T V VLSAC+H G V +G YF M +G P+ EHY C++D+L RAG L
Sbjct: 746 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 805
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
+ A+ I+ MP P ++ + AA+H L+LEP ++ YV+L+N+Y
Sbjct: 806 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 865
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A S KW+ R+ M+++GV+K+PG SWIEVK +H F D +HP+ EIH Y ++++
Sbjct: 866 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 925
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++ + GYV D K+ + HSEKLA++FGLLS PI VMKNLR+C
Sbjct: 926 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 985
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH IKF+S ++ REI VRD YRFH F+ G CSC DYW
Sbjct: 986 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 253/536 (47%), Gaps = 57/536 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C L G+ LH L LK Y+ N + LY G L +A H
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH------ 304
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+F + Q D V+YNTLI+ + CG E A+ LFK
Sbjct: 305 -------------------------IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 339
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D TL+ L+ A S + L + QLH GF + +LL Y++
Sbjct: 340 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A F E E+++ V WN M+VAYG + + ++F++M ++ + YT SIL
Sbjct: 400 IETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 458
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
L DL G Q H+ +IK+ F N+++ S LID+YAK G + + D+V
Sbjct: 459 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL-GKLDTAWDILIRFAGKDVV 517
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W TMI+GY+Q + D+AL F+++ G D+ +SAC+ L G+QIHA
Sbjct: 518 SWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 576
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ S+ + NALV +YS+CG +E++ F++ + ++ N++++G+ Q G E
Sbjct: 577 AC-VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 635
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
ALR+F M I N TF S + A + T + +G++ +++ G++ E E + +I
Sbjct: 636 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALI 694
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ + G ++DAE+ FL++ N V + + N Y+ G
Sbjct: 695 SMYAKCGSISDAEK------------------QFLEVSTKNEVSWNAIINAYSKHG 732
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 223/473 (47%), Gaps = 27/473 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--- 140
A ++FD++P+ + ++N +I A LF M + + T SG++ A
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
S +++Q+H +Y G V N L+ YSRNGF+D A+RVF + +KD SW
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWV 217
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ ++ EA++LF +M L + Y +S+L+A +E L G Q H ++K
Sbjct: 218 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 277
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
GF ++++ + L+ LY G++ +F + Q D V +NT+I+G SQ Y ++A+
Sbjct: 278 GFSSDTYVCNALVSLYFHL-GNLISAEHIFSNMSQRDAVTYNTLINGLSQC-GYGEKAME 335
Query: 321 CFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
FK+++ G PD + ++ ACS + + G+Q+HA T K+ SN + AL+ +Y
Sbjct: 336 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN-KIEGALLNLY 394
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+KC ++E A F N V N M+ Y + R+F M I P T+
Sbjct: 395 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 454
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S+L C G + G++ S + F+ S +ID+ + GKL A ++
Sbjct: 455 SILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL----- 508
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
++ + V + + Y ++ T R M DRG++
Sbjct: 509 -------------IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 548
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 153/572 (26%), Positives = 260/572 (45%), Gaps = 41/572 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y+R + AR++FD + D S+ +IS + A+ LF DM
Sbjct: 186 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 245
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ S +++A +L + +QLH L + GF V N+L++ Y G L A+ +
Sbjct: 246 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 305
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + +D V++N+++ Q G +A++LF+ M L D TLAS++ A ++
Sbjct: 306 FSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 364
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA+ K GF N+ I L++LYAKC+ D+ + F E ++VLWN M+
Sbjct: 365 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA-DIETALDYFLETEVENVVLWNVMLV 423
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y ++ + + F+++ P+ ++ ++ C L LG+QIH+ IK +
Sbjct: 424 AYGLLDDLRN-SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 482
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N V + L+ MY+K G L+ A + R + VS +MIAGY Q+ +AL F
Sbjct: 483 LNAY-VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 541
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML+ I + + +SACA + EGQ+ + + GF + + ++ L R G
Sbjct: 542 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCG 600
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
K+ ++ E Q E + + + L + + SG EE +
Sbjct: 601 KIEESYLAFE------------------QTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 642
Query: 546 MRDRGVQKKPGFSWIEVK-----------KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
M G+ VK KQ+H + + G + E+ N L M K
Sbjct: 643 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG-YDSETEVCNALISMYAK-- 699
Query: 595 QAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
G + D EK+ + S K V++ + +Y +
Sbjct: 700 -CGSISDAEKQFLEVSTKNEVSWNAIINAYSK 730
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 190/414 (45%), Gaps = 42/414 (10%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
++LH + G D ++ L Y G L A +VF EM E + +WN M+
Sbjct: 65 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKELAS 123
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASIL-------TAFTSLEDLVGGLQFHAHLIKSG 261
E LF MVS + + T + +L AF +E Q HA ++ G
Sbjct: 124 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE------QIHARILYQG 177
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
++ + + LIDLY++ +G + +VF+ + D W MISG S K E +A+
Sbjct: 178 LRDSTVVCNPLIDLYSR-NGFVDLARRVFDGLRLKDHSSWVAMISGLS-KNECEAEAIRL 235
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F + +G P +F V+SAC + S +G+Q+H L +K+ S+ V NALV++Y
Sbjct: 236 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY-VCNALVSLYF 294
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
GNL A +F M + + V+ N++I G +Q G G +A+ LF+ M + P + T S
Sbjct: 295 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 354
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
++ AC+ G + GQ+ + + GF + +++L + +
Sbjct: 355 LVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE------------ 401
Query: 501 PGSIALKAANHFLQLEPSNAVPY-VMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A ++FL+ E N V + VML A G +++ R+ R +++
Sbjct: 402 ------TALDYFLETEVENVVLWNVML----VAYGLLDDLRNSFRIFRQMQIEE 445
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K ++ GK +HA+ K + N I +Y+KCG +S A F +
Sbjct: 654 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 713
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
N S+N ++ AY++ + A FDQ+ +P+ V+ ++SA + G + +
Sbjct: 714 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 773
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ F+ M + GL + +C++ L +R
Sbjct: 774 AYFESMNSEY---------GLSPKPEHYVCVVDML-----------------------TR 801
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G L AK EM D + W +++ A H+
Sbjct: 802 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 835
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 336/540 (62%), Gaps = 35/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N +L Y++ G L+EA+ +F +M KD VSW ++ Y Q + EAL LF +M+ L
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKM-PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGF 202
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ +TL+S+L A + G Q HA +K G+ N H+GS L+D+YA+ + MR+
Sbjct: 203 QPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWA-HMREAK 261
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SN 346
+F + ++V WN +I+G+++K E + + F ++ R G+ P ++ V +AC S+
Sbjct: 262 VIFNSLAAKNVVSWNALIAGHARKGE-GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 320
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S GK +HA IK + + N L+ MY+K G+++DA+++F R+ + + VS NS+
Sbjct: 321 GSLEQGKWVHAHVIKSGGQPIAY-IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSI 379
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+GYAQHG+G EAL+LFE ML+ + P ITF+SVL+AC+H+G + EGQ YF +MK
Sbjct: 380 ISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HK 438
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
E + H+ ++DLLGRAG+L +A + IE MP P + + + AA
Sbjct: 439 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAA 498
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+L+P ++ P+V+L+NIYA++G+ + A +R++M++ GV+K+P SW+E++ ++HVF
Sbjct: 499 EQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVF 558
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
VA D SHPM +EI E++S K+K+ GYVP D+E +L +HSEKLA+AF
Sbjct: 559 VANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAF 618
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+L T G I + KN+RICGDCH+A KF S + GREI VRDT RFH F G CSC DYW
Sbjct: 619 AVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 189/382 (49%), Gaps = 34/382 (8%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +L T L L G HAH+ S F + + + ++++YAKC G + + +F+++P
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-GSLEEAQDLFDKMP 167
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS--LG 352
D+V W +ISGYSQ + S +AL F K+ +G+ P++ + ++ A S PS G
Sbjct: 168 TKDMVSWTVLISGYSQSGQAS-EALALFPKMLHLGFQPNEFTLSSLLKA-SGTGPSDHHG 225
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+Q+HA ++K N + V ++L+ MY++ ++ +A+ +F+ + N VS N++IAG+A+
Sbjct: 226 RQLHAFSLKYGYDMN-VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G +RLF ML PT+ T+ SV +ACA +G + +G K+ G +P
Sbjct: 285 KGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQG-KWVHAHVIKSGGQPIAY 343
Query: 473 HYSCMIDLLGRAGKLTDAE----RLIEAMPFNPGSIALKAANHFLQLEP----------- 517
+ +ID+ ++G + DA+ RL++ + SI A H L E
Sbjct: 344 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 403
Query: 518 --SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE-DG 574
N + ++ + + SG +E LM+ IE + HV V + G
Sbjct: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK---------IEAQVAHHVTVVDLLG 454
Query: 575 SHPMIKEIHNYLEEMSRKMKQA 596
+ E + ++EEM K A
Sbjct: 455 RAGRLNEANKFIEEMPIKPTAA 476
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V C L GK +HA +K+ AY+ N I +Y+K G + A F +
Sbjct: 309 TYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 368
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S+N +++ YA+ A A QLF+Q+ QP+ +++ ++++A + G +
Sbjct: 369 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 428
Query: 117 SLFKDMREKRFDT 129
F+ M++ + +
Sbjct: 429 YYFELMKKHKIEA 441
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/548 (40%), Positives = 322/548 (58%), Gaps = 35/548 (6%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
F H + N+LL Y++ G L+EA++VF +M + +D V+W +++ Y QH +AL F
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFF 149
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M+ + +TL+S++ A + G Q H +K GF N H+GS L+DLY +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR- 208
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G M D VF+ + + V WN +I+G++++ +++AL F+ + R G+ P S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSG-TEKALELFQGMLRDGFRPSHFSYAS 267
Query: 340 VISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+ ACS+ GK +HA IK + + N L+ MY+K G++ DAR++FDR+ +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS NS++ YAQHG G EA+ FE M I P I+F+SVL+AC+H+G + EG Y+
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---------- 508
+MK G PE HY ++DLLGRAG L A R IE MP P + KA
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 509 -------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
A H +L+P + P+V+L NIYA+ G+W + A +R+ M++ GV+K+P SW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------H 609
++ +H+FVA D HP +EI EE+ K+K+ GYVPD +VH H
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYH 565
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEK+A+AF LL+T G I + KN+R+CGDCH AIK S + GREI VRDT RFH FKDG
Sbjct: 566 SEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDG 625
Query: 670 RCSCGDYW 677
CSC DYW
Sbjct: 626 NCSCKDYW 633
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 168/322 (52%), Gaps = 31/322 (9%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L T + L+ G HAH+++S F + +G+ L+++YAKC G + + KVFE++PQ
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLEEARKVFEKMPQ 123
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLGKQ 354
D V W T+ISGYSQ + D AL F ++ R GY P++ + VI +A + G Q
Sbjct: 124 RDFVTWTTLISGYSQHDRPCD-ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K SN + V +AL+ +Y++ G ++DA+ +FD + N VS N++IAG+A+
Sbjct: 183 LHGFCVKCGFDSN-VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM----KDMFGFEPE 470
+AL LF+ ML P++ ++ S+ AC+ TG + +G+ + M + + F
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG- 300
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
+ ++D+ ++G + DA ++ F +L + V + L Y
Sbjct: 301 ----NTLLDMYAKSGSIHDARKI------------------FDRLAKRDVVSWNSLLTAY 338
Query: 531 AASGKWEEVATIRRLMRDRGVQ 552
A G +E MR G++
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIR 360
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 12 RRDLVTGKSLHALYLKNLVPFSA-----------YLSNHFIL-------LYSKCGCLSAA 53
+RD VT +L + Y ++ P A Y N F L + GC
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 54 HHAF--NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H F +NV + LL Y R + A+ +FD + + VS+N LI+ +A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNS 169
TE AL LF+ M F F+ + L A S+ L K +H I G A N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
LL Y+++G + +A+++F + + +D VSWNS++ AY QH G EA+ F+EM + +
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ + S+LTA + L G ++ + K G + ++DL + +GD+ ++
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR-AGDLNRALRF 420
Query: 290 FEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
EE+P +P +W +++ + + LG + + PDD
Sbjct: 421 IEEMPIEPTAAIWKALLNACRM---HKNTELGAYAAEHVFELDPDD 463
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ + C L GK +HA +K+ A+ N + +Y+K G + A F++
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N LL AYA+ A F+++ +P+ +S+ ++++A + G +
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 117 SLFKDMRE 124
++ M++
Sbjct: 384 HYYELMKK 391
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/639 (35%), Positives = 354/639 (55%), Gaps = 36/639 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL YA+ I +A F + ++V +N ++ AY D ++ +F+ M+ + +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ +L L +Q+H I F A V + L+ Y++ G LD A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
KD VSW +M+ Y Q+ +AL F++M+ + D L + ++A L+ L
Sbjct: 550 RFAG-KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q HA SGF + + L+ LY++C G + + FE+ D + WN ++SG+
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRC-GKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q +++AL F ++NR G ++ +F + A S + GKQ+HA+ K S
Sbjct: 668 QQSGN-NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS- 725
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
V NAL++MY+KCG++ DA + F + N VS N++I Y++HG G EAL F+ M+
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+N+ P ++T V VLSAC+H G V +G YF M +G P+ EHY C++D+L RAG L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
+ A+ I+ MP P ++ + AA+H L+LEP ++ YV+L+N+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A S KW+ R+ M+++GV+K+PG SWIEVK +H F D +HP+ EIH Y ++++
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++ + GYV D K+ + HSEKLA++FGLLS PI VMKNLR+C
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH IKF+S ++ REI VRD YRFH F+ G CSC DYW
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 253/536 (47%), Gaps = 57/536 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C L G+ LH L LK Y+ N + LY G L +A H
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH------ 344
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+F + Q D V+YNTLI+ + CG E A+ LFK
Sbjct: 345 -------------------------IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D TL+ L+ A S + L + QLH GF + +LL Y++
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A F E E+++ V WN M+VAYG + + ++F++M ++ + YT SIL
Sbjct: 440 IETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
L DL G Q H+ +IK+ F N+++ S LID+YAK G + + D+V
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL-GKLDTAWDILIRFAGKDVV 557
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W TMI+GY+Q + D+AL F+++ G D+ +SAC+ L G+QIHA
Sbjct: 558 SWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ S+ + NALV +YS+CG +E++ F++ + ++ N++++G+ Q G E
Sbjct: 617 AC-VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
ALR+F M I N TF S + A + T + +G++ +++ G++ E E + +I
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALI 734
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ + G ++DAE+ FL++ N V + + N Y+ G
Sbjct: 735 SMYAKCGSISDAEK------------------QFLEVSTKNEVSWNAIINAYSKHG 772
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 223/473 (47%), Gaps = 27/473 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--- 140
A ++FD++P+ + ++N +I A LF M + + T SG++ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
S +++Q+H +Y G V N L+ YSRNGF+D A+RVF + +KD SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWV 257
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ ++ EA++LF +M L + Y +S+L+A +E L G Q H ++K
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
GF ++++ + L+ LY G++ +F + Q D V +NT+I+G SQ Y ++A+
Sbjct: 318 GFSSDTYVCNALVSLYFHL-GNLISAEHIFSNMSQRDAVTYNTLINGLSQC-GYGEKAME 375
Query: 321 CFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
FK+++ G PD + ++ ACS + + G+Q+HA T K+ SN + AL+ +Y
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN-KIEGALLNLY 434
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+KC ++E A F N V N M+ Y + R+F M I P T+
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S+L C G + G++ S + F+ S +ID+ + GKL A ++
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL----- 548
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
++ + V + + Y ++ T R M DRG++
Sbjct: 549 -------------IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 263/573 (45%), Gaps = 43/573 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y+R + AR++FD + D S+ +IS + A+ LF DM
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ S +++A +L + +QLH L + GF V N+L++ Y G L A+ +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + +D V++N+++ Q G +A++LF+ M L D TLAS++ A ++
Sbjct: 346 FSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA+ K GF N+ I L++LYAKC+ D+ + F E ++VLWN M+
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA-DIETALDYFLETEVENVVLWNVMLV 463
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y ++ + + F+++ P+ ++ ++ C L LG+QIH+ IK +
Sbjct: 464 AYGLLDDLRN-SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N V + L+ MY+K G L+ A + R + VS +MIAGY Q+ +AL F
Sbjct: 523 LNAY-VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML+ I + + +SACA + EGQ+ + + GF + + ++ L R G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCG 640
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
K+ ++ E Q E + + + L + + SG EE +
Sbjct: 641 KIEESYLAFE------------------QTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 546 MRDRGVQKKPGFSW------------IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
M G+ F++ ++ KQ+H + + G + E+ N L M K
Sbjct: 683 MNREGIDNN-NFTFGSAVKAASETANMKQGKQVHAVITKTG-YDSETEVCNALISMYAK- 739
Query: 594 KQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
G + D EK+ + S K V++ + +Y +
Sbjct: 740 --CGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 190/414 (45%), Gaps = 42/414 (10%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
++LH + G D ++ L Y G L A +VF EM E + +WN M+
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKELAS 163
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASIL-------TAFTSLEDLVGGLQFHAHLIKSG 261
E LF MVS + + T + +L AF +E Q HA ++ G
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE------QIHARILYQG 217
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
++ + + LIDLY++ +G + +VF+ + D W MISG S K E +A+
Sbjct: 218 LRDSTVVCNPLIDLYSR-NGFVDLARRVFDGLRLKDHSSWVAMISGLS-KNECEAEAIRL 275
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F + +G P +F V+SAC + S +G+Q+H L +K+ S+ V NALV++Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY-VCNALVSLYF 334
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
GNL A +F M + + V+ N++I G +Q G G +A+ LF+ M + P + T S
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
++ AC+ G + GQ+ + + GF + +++L + +
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE------------ 441
Query: 501 PGSIALKAANHFLQLEPSNAVPY-VMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A ++FL+ E N V + VML A G +++ R+ R +++
Sbjct: 442 ------TALDYFLETEVENVVLWNVML----VAYGLLDDLRNSFRIFRQMQIEE 485
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K ++ GK +HA+ K + N I +Y+KCG +S A F +
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
N S+N ++ AY++ + A FDQ+ +P+ V+ ++SA + G + +
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ F+ M + GL + +C++ L +R
Sbjct: 814 AYFESMNSEY---------GLSPKPEHYVCVVDML-----------------------TR 841
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G L AK EM D + W +++ A H+
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 342/563 (60%), Gaps = 39/563 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K +H + F + + NS+L Y++ G L+ A++VF EM +KD V+W SM+ Y Q
Sbjct: 111 KLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMC-VKDVVTWTSMITGYSQ 169
Query: 209 H---REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
AL LF EMV L + + L+S++ L V G Q H K GF +N
Sbjct: 170 DGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQEN 229
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+GS L+D+YA+C G++R+ VF+E+ + V WN +ISG+++K E ++ALG F K+
Sbjct: 230 VFVGSSLVDMYARC-GELRESRLVFDELESKNEVSWNALISGFARKGE-GEEALGLFVKM 287
Query: 326 NRVGYHPDDCSFVCVI-SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
R G+ + ++ ++ S+ + S GK +HA +K + V N L+ MY+K GN
Sbjct: 288 QREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMK-SGKKLVGYVGNTLLHMYAKSGN 346
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE-WMLETNIPPTNITFVSVLS 443
+ DA+++FDR+ + + VS NSM+ GYAQHG+G EA+ LFE ML I P +ITF+SVL+
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
AC+H G + EG YF +MK +G EP+ HY+ ++DL GRAG L A+ IE MP P +
Sbjct: 407 ACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNA 465
Query: 504 -----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+ AA L+L+P + +L+NIYA++G+W++VA +R+ M
Sbjct: 466 TIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEM 525
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
+D G++K+P SW+E++ +H+F A D SHP +++ E +++K+K+ GYVPD
Sbjct: 526 KDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVH 585
Query: 602 -------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
KE L +HSEKLA+AF LL+T G I +MKN+R+CGDCH+AIK++S + RE
Sbjct: 586 VFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKRE 645
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRDT RFH F+DG CSC DYW
Sbjct: 646 IIVRDTNRFHHFRDGSCSCRDYW 668
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 181/366 (49%), Gaps = 31/366 (8%)
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
GL L L SL+ +Y +L T L L G H HL+ S F + I +
Sbjct: 75 GLHVLDLINNG-SLEPDRTIYN--KLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNS 131
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD--QALGCFKKLNRVG 329
++ +YAKC G + +VF+E+ D+V W +MI+GYSQ S AL F ++ R G
Sbjct: 132 ILFMYAKC-GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDG 190
Query: 330 YHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P++ + ++ C L + GKQIH K + N + V ++LV MY++CG L ++
Sbjct: 191 LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQEN-VFVGSSLVDMYARCGELRES 249
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R +FD + N VS N++I+G+A+ G G EAL LF M T T+ ++L + + T
Sbjct: 250 RLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTT 309
Query: 449 GKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA----ERLIEAMPFNPGS 503
G + +G+ + MMK G + G + ++ + ++G + DA +RL++ + S
Sbjct: 310 GSLEQGKWLHAHMMKS--GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNS 367
Query: 504 IALKAANH---------------FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
+ + A H ++++EP N + ++ + + +G +E LM+
Sbjct: 368 MLIGYAQHGLGKEAVELFEEMMLWVEIEP-NDITFLSVLTACSHAGLLDEGLYYFELMKK 426
Query: 549 RGVQKK 554
G++ K
Sbjct: 427 YGLEPK 432
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 12/308 (3%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
NVF + L+ YAR + +R +FD++ + VS+N LIS +A G+ E AL LF M+
Sbjct: 229 NVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQ 288
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F FT S L+ +SS L K LH + G V N+LL Y+++G +
Sbjct: 289 REGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNIC 348
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE-MVSLQLGLDMYTLASILTA 240
+AK+VF + ++ D VS NSM++ Y QH G EA++LF+E M+ +++ + T S+LTA
Sbjct: 349 DAKKVFDRLVKV-DVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTA 407
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ L GL + + K G + ++DL+ + +G + EE+P +P+
Sbjct: 408 CSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGR-AGLLDQAKSFIEEMPIEPNAT 466
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALT 359
+W ++ + A K L ++P + + SN+ S G+
Sbjct: 467 IWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLL------SNIYASAGQWKDVAK 520
Query: 360 IKIEIRSN 367
++ E++ +
Sbjct: 521 VRKEMKDS 528
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L + L GK LHA +K+ Y+ N + +Y+K G + A F++
Sbjct: 298 TYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL 357
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
+V S N +L YA+ A +LF+++ +P+ +++ ++++A + G +
Sbjct: 358 VKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEG 417
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L F+ M++ + HY +V + +
Sbjct: 418 LYYFELMKKYGLEPK-----------------------------LSHYTTV----VDLFG 444
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G LD+AK EM + W +++ A H+
Sbjct: 445 RAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHK 479
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/645 (38%), Positives = 368/645 (57%), Gaps = 41/645 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I +AR +F +P D VS+N++IS E A++ F MR
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV 453
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
F++ ++ AS + L +Q+H I CG D SV+N+LLT Y+ ++E ++V
Sbjct: 454 PSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKV 513
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREG-LEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F+ M E D+VSWNS + A L+A++ F EM+ + T +IL+A +SL
Sbjct: 514 FFLMPEY-DQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLS 572
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
L G Q HA ++K ++ I + L+ Y KC M DC +F + + D V WN M
Sbjct: 573 LLELGRQIHALILKHSVADDNAIENTLLAFYGKCE-QMEDCEIIFSRMSERRDEVSWNAM 631
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY +A+G + + G DD + V+SAC++++ G ++HA I+
Sbjct: 632 ISGYIHNG-ILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + + V +ALV MY+KCG ++ A R F+ MP N S NSMI+GYA+HG G +AL+LF
Sbjct: 691 LEA-EVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLF 749
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M + P ++TFV VLSAC+H G V EG ++F M +++ P EH+SCM+DLLGR
Sbjct: 750 TQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGR 809
Query: 484 AGKLTDAERLIEAMPFNPGS-------------------IALKAANHFLQLEPSNAVPYV 524
AG + E I+ MP NP + + +AA ++LEP NAV YV
Sbjct: 810 AGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYV 869
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N++AA GKWE+V R MR+ V+K+ G SW+ +K +HVFVA D +HP ++I++
Sbjct: 870 LLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYD 929
Query: 585 YLEEMSRKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVMK 632
L+E+ KM+ GYVP+ + L +HSEKLA+AF +L+ PI ++K
Sbjct: 930 KLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRIIK 988
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCH A K+IS I R+I +RD+ RFH F G CSC DYW
Sbjct: 989 NLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 228/453 (50%), Gaps = 52/453 (11%)
Query: 6 LKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
L+ C +G L G +H L K+ LSN + +YS C
Sbjct: 147 LRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSA-------------- 192
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
I AR++F++I S+N++IS Y GD SA LF M+
Sbjct: 193 ----------------SIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQ 236
Query: 124 EKRFD----TDGFTLSGLITASSN----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ + + +T L+T + + L L++Q+ F V ++L++ ++
Sbjct: 237 REATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFA 296
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
R G +D AK +F +M + ++ V+ N ++V + +G EA ++F+EM L + ++ + A
Sbjct: 297 RYGLIDSAKMIFEQMDD-RNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYA 354
Query: 236 SILTAFTSLEDLV----GGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVF 290
+L+AFT +L G + HA+LI++ IG+ L++LYAKC+ + + +F
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNA-IDNARSIF 413
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-P 349
+ +P D V WN++ISG E + ++A+ CF + R G P S + +S+C++L
Sbjct: 414 QLMPSKDTVSWNSIISGLDHNERF-EEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI 472
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG+QIH IK + + +SV+NAL+ +Y++ +E+ +++F MPE++ VS NS I
Sbjct: 473 MLGQQIHGEGIKCGLDLD-VSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGA 531
Query: 410 YAQHGIG-MEALRLFEWMLETNIPPTNITFVSV 441
A ++A++ F M++ P +TF+++
Sbjct: 532 LATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 220/434 (50%), Gaps = 32/434 (7%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF N L+ + R + SA++LFD++PQ +LVS++ L+S YA G + A LF+ +
Sbjct: 72 SDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGI 131
Query: 123 REKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-N 177
+ + + + A N L L ++H L + ++N L++ YS +
Sbjct: 132 ISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCS 191
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF----QEMVSLQLGLDMYT 233
+D+A+RVF E+ ++K SWNS++ Y + + + A +LF +E L + YT
Sbjct: 192 ASIDDARRVFEEI-KMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYT 250
Query: 234 LASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
S++T SL D L Q A + KS F ++ ++GS L+ +A+ G + +FE
Sbjct: 251 FCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR-YGLIDSAKMIFE 309
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS--- 348
++ + V N ++ G +++ + ++A FK++ + + S+ ++SA + S
Sbjct: 310 QMDDRNAVTMNGLMVGLARQHQ-GEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLK 367
Query: 349 --PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+++HA I+ + I + NALV +Y+KC +++AR +F MP +TVS NS+
Sbjct: 368 EGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSI 427
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G + EA+ F M + P+ + +S LS+CA G + M G
Sbjct: 428 ISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI------------MLG 475
Query: 467 FEPEGEHYSCMIDL 480
+ GE C +DL
Sbjct: 476 QQIHGEGIKCGLDL 489
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 158/315 (50%), Gaps = 11/315 (3%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLH G N+L+ + R G L A+++F EM + K+ VSW+ +V Y Q+
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ-KNLVSWSCLVSGYAQN 118
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED--LVGGLQFHAHLIKSGFHQNSH 267
EA LF+ ++S L + Y + S L A L L G++ H + KS + +
Sbjct: 119 GMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMV 178
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + L+ +Y+ CS + D +VFEEI WN++IS Y ++ + + A F + R
Sbjct: 179 LSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGD-AISAFKLFSSMQR 237
Query: 328 ----VGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS--NRISVNNALVAMYSK 381
+ P++ +F +++ +L + + +IE S + V +ALV+ +++
Sbjct: 238 EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
G ++ A+ +F++M + N V++N ++ G A+ G EA ++F+ M + + ++ +
Sbjct: 298 YGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVL 356
Query: 442 LSACAHTGKVAEGQK 456
LSA + EG++
Sbjct: 357 LSAFTEFSNLKEGKR 371
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 58/305 (19%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G+ +HAL LK+ V + N + Y KC + F+
Sbjct: 577 GRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFS------------------- 617
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
R++ R D VS+N +IS Y G A+ L M +K D FTL+ +
Sbjct: 618 --RMSERR---------DEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATV 666
Query: 138 ITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
++A ++ L + ++H AI + V ++L+ Y++ G +D A R F+E+ +++
Sbjct: 667 LSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASR-FFELMPVRN 725
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
SWNSM+ Y +H G +AL+LF +M D T +L+A + H
Sbjct: 726 IYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACS-----------HV 774
Query: 256 HLIKSGFHQNSHIG------------SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWN 302
L+ GF +G S ++DL + +GD++ + + +P P+ ++W
Sbjct: 775 GLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGR-AGDVKKLEEFIKTMPMNPNALIWR 833
Query: 303 TMISG 307
T++
Sbjct: 834 TILGA 838
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G +HA ++ + + + + +Y+KCG + A F
Sbjct: 662 TLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELM 721
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N++S+N +++ YAR A +LF Q+ Q PD V++ ++SA + G +
Sbjct: 722 PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGF 781
Query: 117 SLFKDMRE 124
FK M E
Sbjct: 782 EHFKSMGE 789
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/714 (34%), Positives = 387/714 (54%), Gaps = 76/714 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F + C +DL G+ LHA+ L+ L+ F L I +Y++C
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARC------------- 107
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R L +A R+ FD++ + LV++N LI+ Y+ GD AL +++
Sbjct: 108 ----------------RDLELA--RKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 121 DMREKR---FDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
DM K D T S + A S ++ +++ + G+ + V N+L+ YS
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYS 209
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L+ A++VF + +D ++WN+M+ Y + +AL+LFQ M ++ T
Sbjct: 210 KCGSLESARKVFDRLKN-RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+LTA T+LEDL G H + + G+ + IG+ L+++Y KCS + + +VFE +
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
D++ WN +I Y Q + D AL FK++ P++ + V+SAC+ L + GK
Sbjct: 329 RDVITWNILIVAYVQYGQAKD-ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HAL +++ + + N+L+ MY++CG+L+D +F + + + VS +++IA YAQHG
Sbjct: 388 VHALIASGRCKAD-VVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEH 473
L F +L+ + ++T VS LSAC+H G + EG Q + SM+ D G P+ H
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGD-HGLAPDYRH 505
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLE 516
+ CM+DLL RAG+L AE LI MPF P ++A + A+ +LE
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565
Query: 517 PSNAVPYV-MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ V +L+N+YA +G+W++V R+ R +K PG S+IE+ +H FVA D S
Sbjct: 566 SEDEHSTVTLLSNVYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKS 622
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
HP + I ++ +S++MK AGYVPD KE+ L +HSEKLA+A+GL+ST
Sbjct: 623 HPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTP 682
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G P+ ++KNLR C DCH A KFIS I GR+I VRD+ RFH F++G CSC DYW
Sbjct: 683 PGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 139/269 (51%), Gaps = 22/269 (8%)
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y KC G + D + VF I P+ V W +++ +++ Y +ALG ++++ G PD
Sbjct: 1 MYGKC-GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYR-EALGYYRRMVLEGLRPDG 58
Query: 335 CSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
FV I CS+ S L G+ +HA+ ++ ++ I + AL+ MY++C +LE AR+ F
Sbjct: 59 AMFVVAIGVCSS-SKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTF 117
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSACAHTG 449
D M + V+ N++IAGY+++G AL++++ M+ + + P ITF S L AC+ G
Sbjct: 118 DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVG 177
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP----------- 498
+++G++ G+ + + +I++ + G L A ++ + +
Sbjct: 178 DISQGRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 499 --FNPGSIALKAANHFLQLEPSNAVPYVM 525
+ A +A F ++ P++ P V+
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVV 265
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 340/567 (59%), Gaps = 37/567 (6%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N L K +H L + F + N+LL Y++ G L A+++F EM +D V+W ++
Sbjct: 29 NKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS-RDVVTWTAL 87
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL--EDLVGGLQFHAHLIKS 260
+ Y QH +AL L EM+ + L + +TLAS+L A + + D++ G Q H ++
Sbjct: 88 ITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRY 147
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G+ N ++ ++D+YA+C + + +F+ + + V WN +I+GY++K + D+A
Sbjct: 148 GYDSNVYVSCAILDMYARCH-HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ-GDKAFC 205
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F + R P ++ V+ AC+++ S GK +HAL IK + V N L+ MY
Sbjct: 206 LFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAF-VGNTLLDMY 264
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+K G++EDA+++FDR+ + + VS NSM+ GY+QHG+G AL+ FE ML T I P +ITF+
Sbjct: 265 AKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFL 324
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
VL+AC+H G + EG+ YF MMK + EP+ HY M+DLLGRAG L A + I MP
Sbjct: 325 CVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPI 383
Query: 500 NPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
P + + AA +L+ +V+L NIYA +G+W + A +
Sbjct: 384 KPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKV 443
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD- 601
R++M++ GV+K+P SW+E++ ++HVFVA+D +HP +EIHN E++S K+K+ GYVPD
Sbjct: 444 RKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDS 503
Query: 602 -----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+E +L +HSEKLA+AF LL+T G I + KN+RICGDCH+A KF+S +
Sbjct: 504 SHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKL 563
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
REI VRDT RFH F DG CSC DYW
Sbjct: 564 VEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 228/469 (48%), Gaps = 50/469 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+LK C L GK +HAL L + + N + LY+KCG L
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDL-------------- 66
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
AR+LFD++ D+V++ LI+ Y+ + AL L +M
Sbjct: 67 -----------------VYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLR 109
Query: 125 KRFDTDGFTLSGLITAS----SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ FTL+ L+ A+ S ++ +QLH L + G+D V+ ++L Y+R L
Sbjct: 110 IGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHL 169
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+EA+ +F M K+EVSWN+++ Y + +G +A LF M+ + +T +S+L A
Sbjct: 170 EEAQLIFDVMVS-KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCA 228
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+ L G HA +IK G + +G+ L+D+YAK SG + D KVF+ + + D+V
Sbjct: 229 CASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAK-SGSIEDAKKVFDRLAKRDVVS 287
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WN+M++GYSQ AL F+++ R P+D +F+CV++ACS+ G+ +
Sbjct: 288 WNSMLTGYSQ-HGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM 346
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME- 418
K + +IS +V + + G+L+ A + MP T ++ + G + ME
Sbjct: 347 KKYNVEP-QISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMEL 405
Query: 419 ----ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
A +FE L+++ P T++ ++ A G+ + K MMK+
Sbjct: 406 GGYAAECIFE--LDSHYPGTHVLLYNIY---ALAGRWNDAAKVRKMMKE 449
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 153/265 (57%), Gaps = 7/265 (2%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L T L L G HA L+ S F + + + L++LYAKC GD+ K+F+E+
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKC-GDLVYARKLFDEMSS 78
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS---LG 352
D+V W +I+GYSQ + D AL ++ R+G P+ + ++ A S + + G
Sbjct: 79 RDVVTWTALITGYSQHDRPQD-ALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+Q+H L ++ SN + V+ A++ MY++C +LE+A+ +FD M N VS N++IAGYA+
Sbjct: 138 RQLHGLCLRYGYDSN-VYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR 196
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G +A LF ML N+ PT+ T+ SVL ACA G + +G+ ++M +G +
Sbjct: 197 KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK-WGEKLVAF 255
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ ++G + DA+++ + +
Sbjct: 256 VGNTLLDMYAKSGSIEDAKKVFDRL 280
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL C L GK +HAL +K A++ N + +Y+K G + A F++
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+V S+N +L Y++ A Q F+++ + P+ +++ +++A + G +
Sbjct: 281 AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340
Query: 117 SLFKDMRE 124
F M++
Sbjct: 341 HYFDMMKK 348
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/645 (35%), Positives = 377/645 (58%), Gaps = 50/645 (7%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ +AR + +A+++FD + + V + LI+ Y G + LF M + F+ D
Sbjct: 186 LIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKR 185
G+++S +I+A + ++ L +QLH +A+ G + V+ L+ Y++ ++ A++
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARK 305
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLE---ALQLFQEMVSLQLGLDMYTLASILTAFT 242
VF M + +SW +++ Y Q G++ + LF+EM++ + + T +++L A
Sbjct: 306 VFKTMPR-HNVMSWTALISGYVQ--SGVQENNVMALFREMLNESIRPNHITYSNLLKACA 362
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+L D G Q HAH++K+ + +G+ L+ +YA+ SG M + K F++ L+
Sbjct: 363 NLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAE-SGCMEEARKAFDQ-------LYE 414
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
T I S E C K+ + +F ++SA +++ + G+++HAL++K
Sbjct: 415 TNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMK 474
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
RS++ ++N+LV+MY++CG LEDA R FD M +HN +S S+I+G A+HG +AL
Sbjct: 475 AGFRSDQ-GISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALS 533
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+F M+ + P ++T+++VLSAC+H G V EG+++F M+ G P EHY+C++DLL
Sbjct: 534 MFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLL 593
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYV 524
R+G + +A + I MP ++ K AANH + LEP + PYV
Sbjct: 594 ARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYV 653
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N+YA +G W+EVA IR LMRD+ + K+ G SW++V +H F A D SHP+ +I+
Sbjct: 654 LLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYA 713
Query: 585 YLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
L + R++K GYVPD KE+ L+ HSEK+AVAFGL++TS +P+ + K
Sbjct: 714 KLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFK 773
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+C DCH+AIK+IS GREI +RD+ RFH KDG CSCG+YW
Sbjct: 774 NLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 238/499 (47%), Gaps = 61/499 (12%)
Query: 14 DLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
DL G++LH L++ ++ A ++N + +YSKCG + AA
Sbjct: 55 DLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAA------------------- 95
Query: 73 AAYARQLRIASARQLFDQI-PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
R++FDQ+ DLVS+ + S A G +L L +M E +
Sbjct: 96 ------------RRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNA 143
Query: 132 FTLSGLITASSNNLCLIKQLHCLA--IYCGF-------DHYASVNNSLLTCYSRNGFLDE 182
FTL A C ++L LA + GF SV +L+ ++RNG L
Sbjct: 144 FTLCAAARA-----CFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVA 198
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+RVF + E + V W ++ Y Q + ++LF M+ D Y+++S+++A T
Sbjct: 199 AQRVFDGLIE-RTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACT 257
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEIPQPDLVL 300
L + G Q H+ ++ G +S + GL+D+YAK + M KVF+ +P+ +++
Sbjct: 258 ELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMS 317
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
W +ISGY Q + + F+++ P+ ++ ++ AC+NLS G+QIHA
Sbjct: 318 WTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHV 377
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K I + V NALV+MY++ G +E+AR+ FD++ E N +S++ + +
Sbjct: 378 LKTSIAHVNV-VGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSK 436
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMI 478
+ + + T TF S+LSA A G + +GQK ++ MK GF + + ++
Sbjct: 437 IEGMDDGVST------FTFASLLSAAASVGLLTKGQKLHALSMK--AGFRSDQGISNSLV 488
Query: 479 DLLGRAGKLTDAERLIEAM 497
+ R G L DA R + M
Sbjct: 489 SMYARCGYLEDACRAFDEM 507
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 165/382 (43%), Gaps = 49/382 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C D +G+ +HA LK + + N + +Y++ GC+ A AF+Q
Sbjct: 353 TYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ S + PD+ + S + + +S
Sbjct: 413 YETNILSMS------------------------PDVETERNNASCSSKIEGMDDGVST-- 446
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
FT + L++A+++ L K +LH L++ GF ++NSL++ Y+R G
Sbjct: 447 -----------FTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCG 495
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+L++A R F EM + + +SW S++ +H +AL +F +M+ + + T ++L
Sbjct: 496 YLEDACRAFDEMKD-HNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVL 554
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + + G + F + G + ++DL A+ SG + + + E+P +
Sbjct: 555 SACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLAR-SGLVEEARQFINEMPCKA 613
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
D ++W T++S Y + +G + + P D + ++ SNL G
Sbjct: 614 DALVWKTLLSAC---RTYGNTEIGEIAANHVINLEPRDPAPYVLL---SNLYADAGLWDE 667
Query: 357 ALTIKIEIRSNRISVNNALVAM 378
I+ +R +S L M
Sbjct: 668 VARIRSLMRDKNLSKETGLSWM 689
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
A +LT+ DL G H L++S ++ + + L+ +Y+KC G + +VF+++
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKC-GAVEAARRVFDQM 102
Query: 294 -PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPS 350
DLV W M S + + ++L ++ +G P+ + AC L
Sbjct: 103 CGVRDLVSWTAMASCLA-RNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRL 161
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G + +K +SV AL+ M+++ G+L A+R+FD + E +V +I Y
Sbjct: 162 AGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRY 221
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
Q G + + LF ML+ P + S++SAC G V GQ+ S+
Sbjct: 222 VQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSV 271
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 373/659 (56%), Gaps = 48/659 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+A Y + ++AS++ L DLV++NT++S+ AL ++M
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMV 290
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNGFL 180
+ + DGFT+S ++ A S+ L K+LH A+ G D + V ++L+ Y +
Sbjct: 291 LEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 350
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILT 239
RVF M + K + WN+M+ Y Q+ EAL LF EM S L + T+A ++
Sbjct: 351 LSGCRVFDGMFDRKIGL-WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVP 409
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A H ++K G ++ + + L+D+Y++ G + ++F ++ DLV
Sbjct: 410 ACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRL-GKIDIAKRIFGKMEDRDLV 468
Query: 300 LWNTMISGYSQKEEYSDQALGCFK----------KLNRVGYHPDDCSFVCVISACSNLSP 349
WNT+I+GY E + D L K + +RV P+ + + ++ +C+ LS
Sbjct: 469 TWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA 528
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+ GK+IHA IK + ++ ++V +ALV MY+KCG L+ +R++FD++P N ++ N ++
Sbjct: 529 LAKGKEIHAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVM 587
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Y HG +A+ + M+ + P +TF+SV +AC+H+G V EG K F MK +G E
Sbjct: 588 AYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVE 647
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN---PGS---------------IALKAAN 510
P +HY+C++DLLGRAG++ +A +LI +P N G+ I AA
Sbjct: 648 PSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQ 707
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ +QLEP+ A YV+LANIY+++G W + +RR M+ +GV+K+PG SWIE ++H FV
Sbjct: 708 NLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFV 767
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
A D SHP +++ YLE + +M++ GY+PD KE L HSEKLA+AFG
Sbjct: 768 AGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 827
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+L+TS G I V KNLR+C DCH A KFIS + REI +RD RFH FK+G CSCGDYW
Sbjct: 828 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 152/574 (26%), Positives = 276/574 (48%), Gaps = 81/574 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +LK +D+ GK +HA +Y S ++N + LY KCG A +
Sbjct: 96 FPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY------ 149
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++FD+I + + VS+N+LIS+ E AL F+
Sbjct: 150 -------------------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 184
Query: 121 DMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
M ++ + FTL + A SN L + KQ+H + G + + + N+L+ Y
Sbjct: 185 CMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYG 243
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L +K V E +D V+WN+++ + Q+ + LEAL+ +EMV + D +T++
Sbjct: 244 KMGKLASSK-VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTIS 302
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A + LE L G + HA+ +K+G +NS +GS L+D+Y C + C +VF+ +
Sbjct: 303 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGC-RVFDGMF 361
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPSLGK 353
+ LWN MI+GY+Q EY ++AL F ++ G + + V+ AC S + K
Sbjct: 362 DRKIGLWNAMITGYAQN-EYDEEALLLFIEMEESAGLLANSTTMAGVVPACVR-SGAFSK 419
Query: 354 Q--IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
+ IH +K + +R V NAL+ MYS+ G ++ A+R+F +M + + V+ N++I GY
Sbjct: 420 KEAIHGFVVKRGLDRDRF-VQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478
Query: 412 QHGIGMEALRLFEWM--LE---------TNIPPTNITFVSVLSACAHTGKVAEGQKY--F 458
+AL + M LE ++ P +IT +++L +CA +A+G++ +
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
++ ++ G S ++D+ + G L + ++ + +P
Sbjct: 539 AIKNNLATDVAVG---SALVDMYAKCGCLQMSRKVFDQIPIR------------------ 577
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
N + + ++ Y G ++ + R+M +GV+
Sbjct: 578 NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVK 611
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 166/360 (46%), Gaps = 47/360 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK LHA LKN G L
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKN-------------------GSLDE-------- 332
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + L+ Y ++ S ++FD + + +N +I+ YA E AL LF
Sbjct: 333 ---NSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFI 389
Query: 121 DMREKR-FDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M E + T++G++ A + K+ +H + G D V N+L+ YSR
Sbjct: 390 EMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRL 449
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ----------- 226
G +D AKR+F +M E +D V+WN+++ Y +AL + +M L+
Sbjct: 450 GKIDIAKRIFGKM-EDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVS 508
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
L + TL +IL + +L L G + HA+ IK+ + +GS L+D+YAKC G ++
Sbjct: 509 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-GCLQMS 567
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
KVF++IP +++ WN ++ Y D A+ + + G P++ +F+ V +ACS+
Sbjct: 568 RKVFDQIPIRNVITWNVIVMAYGMHGNSQD-AIDMLRMMMVQGVKPNEVTFISVFAACSH 626
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 128/249 (51%), Gaps = 11/249 (4%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGL 272
EA+ + +M+ L + D + ++L A L+D+ G Q HAH+ K G+ +S + + L
Sbjct: 76 EAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTL 135
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
++LY KC GD KVF+ I + + V WN++IS E++ + AL F+ + P
Sbjct: 136 VNLYRKC-GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDEDVEP 193
Query: 333 DDCSFVCVISACSNLS-PS---LGKQIHALTI-KIEIRSNRISVNNALVAMYSKCGNLED 387
+ V V ACSN P +GKQ+HA + K E+ S I N LVAMY K G L
Sbjct: 194 SSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII---NTLVAMYGKMGKLAS 250
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
++ L + V+ N++++ Q+ +EAL M+ + P T SVL AC+H
Sbjct: 251 SKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSH 310
Query: 448 TGKVAEGQK 456
+ G++
Sbjct: 311 LEMLRTGKE 319
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+G PD+ +F ++ A ++L LGKQIHA K + ++V N LV +Y KCG+
Sbjct: 87 LGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 146
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
++FDR+ E N VS NS+I+ AL F ML+ ++ P++ T VSV AC+
Sbjct: 147 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACS 206
Query: 447 HTGKVAEGQKYFSMMKDMFGFE-PEGEHYSCMIDLL----GRAGKLTDAERLI 494
+ + EG M K + + +GE S +I+ L G+ GKL ++ L+
Sbjct: 207 NF-PMPEG---LLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLL 255
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L +C L GK +HA +KN + + + + +Y+KCGCL + F+Q
Sbjct: 515 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 574
Query: 61 QHANVFSFNVLLAAYA----RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
NV ++NV++ AY Q I R + Q +P+ V++ ++ +A + G L
Sbjct: 575 PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGL 634
Query: 117 SLFKDMRE 124
+F +M++
Sbjct: 635 KIFYNMKK 642
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ CV +++H +K + ++ N + +YS+ G + A F +
Sbjct: 403 TMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKM 462
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ DLV++NT+I+ Y E AL +
Sbjct: 463 E-------------------------------DRDLVTWNTIITGYVFSERHEDALLMLH 491
Query: 121 DMR--EKR---------FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVN 167
M+ E++ + TL ++ A+ + L K++H AI +V
Sbjct: 492 KMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 551
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ Y++ G L +++VF ++ I++ ++WN +V+AYG H +A+ + + M+ +
Sbjct: 552 SALVDMYAKCGCLQMSRKVFDQI-PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGV 610
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T S+ A + + GL+ ++ K G +S + ++DL + +G +++
Sbjct: 611 KPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGR-AGRVKEA 669
Query: 287 MKVFEEIPQ 295
++ IP+
Sbjct: 670 YQLINLIPR 678
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/714 (34%), Positives = 387/714 (54%), Gaps = 76/714 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F + C +DL G+ LHA+ L+ L+ F L I +Y++C
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARC------------- 107
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R L +A R+ FD++ + LV++N LI+ Y+ GD AL +++
Sbjct: 108 ----------------RDLELA--RKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 121 DMREKR---FDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
DM K D T S + A + ++ +++ + G+ + V N+L+ YS
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYS 209
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L+ A++VF + +D ++WN+M+ Y + +AL+LFQ M ++ T
Sbjct: 210 KCGSLESARKVFDRLKN-RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+LTA T+LEDL G H + + G+ + IG+ L+++Y KCS + + +VFE +
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
D++ WN +I Y Q + D AL FK++ P++ + V+SAC+ L + GK
Sbjct: 329 RDVITWNILIVAYVQYGQAKD-ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HAL +++ + + N+L+ MY++CG+L+D +F + + + VS +++IA YAQHG
Sbjct: 388 VHALIASGRCKAD-VVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEH 473
L F +L+ + ++T VS LSAC+H G + EG Q + SM+ D G P+ H
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGD-HGLAPDYRH 505
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLE 516
+ CM+DLL RAG+L AE LI MPF P ++A + A+ +LE
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565
Query: 517 PSNAVPYV-MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ V +L+N+YA +G+W++V R+ R +K PG S+IE+ +H FVA D S
Sbjct: 566 SEDEHSTVTLLSNVYAEAGRWDDV---RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKS 622
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
HP + I ++ +S++MK AGYVPD KE+ L +HSEKLA+A+GL+ST
Sbjct: 623 HPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTP 682
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G P+ ++KNLR C DCH A KFIS I GR+I VRD+ RFH F++G CSC DYW
Sbjct: 683 PGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 22/269 (8%)
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y KC G + D + VF I P+ V W +++ +++ Y +ALG ++++ G PD
Sbjct: 1 MYGKC-GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYR-EALGYYRRMVLEGLRPDG 58
Query: 335 CSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
FV I CS+ S L G+ +HA+ ++ + I + AL+ MY++C +LE AR+ F
Sbjct: 59 AMFVVAIGVCSS-SKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTF 117
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSACAHTG 449
D M + V+ N++IAGY+++G AL++++ M+ + + P ITF S L AC G
Sbjct: 118 DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVG 177
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP----------- 498
+++G++ G+ + + +I++ + G L A ++ + +
Sbjct: 178 DISQGRE-IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 499 --FNPGSIALKAANHFLQLEPSNAVPYVM 525
+ A +A F ++ P++ P V+
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVV 265
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 262/701 (37%), Positives = 381/701 (54%), Gaps = 74/701 (10%)
Query: 15 LVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
L+ G+ +H L+ L+ LSN + +Y+KCG + A
Sbjct: 390 LMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKA-------------------- 429
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
+R R+ AR D VS+NT+IS G E A+ + MR+ F
Sbjct: 430 --SRVFRLLCAR---------DRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFA 478
Query: 134 -LSGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+SGL + +S L +Q+HC A+ G D SV+N+L+ Y G E+ +F M
Sbjct: 479 AISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA 538
Query: 192 EIKDEVSWNS-MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
E D VSWNS M V H E++++F M+ L + T ++L+A + L L G
Sbjct: 539 E-HDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELG 597
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYS 309
Q HA ++K G +++ + + L+ YAK SGDM C ++F + + D V WN+MISGY
Sbjct: 598 KQVHAVVLKHGAIEDNAVDNALMSCYAK-SGDMDSCEQLFSSMSGRRDAVSWNSMISGYI 656
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
+ + + C + D C+F V++AC++++ G ++HA I+ ++ S+
Sbjct: 657 YNG-HLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESD- 714
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V +AL+ MYSKCG ++ A ++F+ M + N S NSMI+GYA+HG+G +AL +FE M
Sbjct: 715 VVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQR 774
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
P ++TFVSVLSAC+H G V G YF MM+D G P EHYSC+IDLLGRAGKL
Sbjct: 775 NGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED-HGILPHIEHYSCVIDLLGRAGKLL 833
Query: 489 DAERLIEAMPFNPGSIALK--------------------AANHFLQLEPSNAVPYVMLAN 528
+ I MP P ++ + A+ L+LEP N V YV+ +N
Sbjct: 834 KIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASN 893
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
YAA+G+WE+ A R M ++K+ G SW+ + +H F+A D SHP KEI+ L
Sbjct: 894 FYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNF 953
Query: 589 MSRKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ +K+K AGYVP E L +HSEKLAVAF L +S PI +MKNLR+
Sbjct: 954 LIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRV 1013
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH A ++IS I R+I +RD+ RFH F+DG+CSCGDYW
Sbjct: 1014 CGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 264/544 (48%), Gaps = 56/544 (10%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM- 122
++F N L+ YA+ R+A+ARQ+FD + + + VS+ L+S Y G T+ A +FK M
Sbjct: 90 DLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAML 149
Query: 123 -------REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
R F T G L A + L Q+H L + +V N+L++ Y
Sbjct: 150 WEGSEFSRPTPF-TFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYG 208
Query: 176 R--NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV----SLQLGL 229
G +A++VF + ++D ++WN+++ Y + + LF M+ +++L
Sbjct: 209 NCSVGLPLQAQQVF-DTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRP 267
Query: 230 DMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ +T S++TA TSL G+ Q A ++KSG + ++GS L+ +A+ G + +
Sbjct: 268 NEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFAR-HGMLDEAK 325
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F + + + V N +I G K+ S++A+G F R + + +FV ++SA +
Sbjct: 326 DIFINLKERNAVTLNGLIVGLV-KQHCSEEAVGIFMG-TRDSFVVNTDTFVVLLSAVAEF 383
Query: 348 S-PS----LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
S P G+++H ++ + +I+++N LV MY+KCG ++ A R+F + + VS
Sbjct: 384 SIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVS 443
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMM 461
N++I+ Q+G A+ + M + I P+N +S LS+CA + GQ+ + +
Sbjct: 444 WNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAV 503
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAV 521
K +G + + + ++ + G G +++ + +M A H + N++
Sbjct: 504 K--WGLDLDTSVSNALVKMYGDCGARSESWEIFNSM-----------AEH--DIVSWNSI 548
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF----------SWIEVKKQMHVFVA 571
VM+++ +A + E V +MR K F S +E+ KQ+H V
Sbjct: 549 MGVMVSS-HAPTA--ESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVL 605
Query: 572 EDGS 575
+ G+
Sbjct: 606 KHGA 609
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 161/326 (49%), Gaps = 20/326 (6%)
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
+GL+ ++LH + G H ++N L+ Y++ L A++VF M E +
Sbjct: 62 AGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLE-R 120
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM-----YTLASILTAFTSL-EDLV 248
+ VSW +V Y EA ++F+ M L G + +T S+L A DL+
Sbjct: 121 NAVSWTCLVSGYVLSGITDEAFRVFKAM--LWEGSEFSRPTPFTFGSVLRACQDAGPDLL 178
Query: 249 G-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMIS 306
+Q H + K+ + N+ + + LI +Y CS G +VF+ P DL+ WN ++S
Sbjct: 179 AFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMS 238
Query: 307 GYSQKEEYSDQALGCFKKL----NRVGYHPDDCSFVCVISACSNLSPSLG--KQIHALTI 360
Y++K Y F + + + P++ +F +I+A S S S G Q+ A +
Sbjct: 239 VYAKK-GYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVL 297
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K S+ + V +ALV+ +++ G L++A+ +F + E N V+LN +I G + EA+
Sbjct: 298 K-SGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAV 356
Query: 421 RLFEWMLETNIPPTNITFVSVLSACA 446
+F ++ + T+ TFV +LSA A
Sbjct: 357 GIFMGTRDSFVVNTD-TFVVLLSAVA 381
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 43/251 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G +HA +++ + + + + +YSKCG + A FN
Sbjct: 682 TFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSM 741
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N FS+N +++ YAR A ++F+++ + PD V++ +++SA + G + L
Sbjct: 742 SQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGL 801
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + I +HY+ V + L R
Sbjct: 802 DYFEMMEDH-----------------------------GILPHIEHYSCVIDLL----GR 828
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM----- 231
G L + + M + + W +++VA Q ++G + + L +E + L L+
Sbjct: 829 AGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDG-DRIDLGKEASRMLLELEPQNPVN 887
Query: 232 YTLASILTAFT 242
Y LAS A T
Sbjct: 888 YVLASNFYAAT 898
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 259/701 (36%), Positives = 381/701 (54%), Gaps = 78/701 (11%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV 97
N I YS+ G + A F++ + N+ S+N ++A Y + R A+ +FD++ + + +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDT-----DGFTLSGLITASSNNLCLI--KQ 150
S+N L+S Y + G A +F M E+ + G+ G+I+ + + K
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKN 221
Query: 151 LHCLAIYCG--------------FDHYAS----VNNSLLTCYSRNGFLDEAKRVFYEMGE 192
+ + G FD +++ Y + G L EA+ +F EM
Sbjct: 222 VVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPR 281
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEM-----VSLQLGLDMYTLASILTAFTSLEDL 247
++ VSW +M+ Y Q+++ A +LF+ M VS L YT L + L
Sbjct: 282 -RNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL--- 337
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
F+A IKS N+ I L +G++ +VF+++ + D W+ MI
Sbjct: 338 -----FNAMPIKSVVACNAMI------LCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS 366
Y +K D AL F+ + R G P+ S + V+S C+ L+ G++IHA ++ +
Sbjct: 387 YERKGLELD-ALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDL 445
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + V + L++MY KCGNL A+++FDR + V NS+I GYAQHG+G+EALR+F M
Sbjct: 446 D-VYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM 504
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ I P ++TFV VLSAC++TG V +G + F+ M+ + E + EHY+CM+DLLGRAGK
Sbjct: 505 HFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGK 564
Query: 487 LTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANI 529
L +A LIE MP +I A AA L LEP NA P+++L+NI
Sbjct: 565 LNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNI 624
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS-HPMIKEIHNYLEE 588
YA+ G+W++VA +RR MRDR V K PG SWI V+K++H F D S HP EI+ LE
Sbjct: 625 YASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEW 684
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+S +++AGY PD K + L +HSEKLAVA+GLL G PI VMKNLR+
Sbjct: 685 LSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRV 744
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH AIK I+ + GREI +RD RFH FKDG CSC DYW
Sbjct: 745 CGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 171/359 (47%), Gaps = 17/359 (4%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+ K + KN V ++A L Y+ CG L A FN +V + N ++ +
Sbjct: 302 IARKLFEVMPEKNEVSWTAMLKG-----YTNCGRLDEASELFNAMPIKSVVACNAMILCF 356
Query: 76 ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ + ARQ+FDQ+ + D +++ +I Y G AL LF+ M+ + + +L
Sbjct: 357 GQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLI 416
Query: 136 GLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
+++ A NL +++H + FD V + LL+ Y + G L +AK+VF +
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA-V 475
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ- 252
KD V WNS++ Y QH G+EAL++F +M + D T +L+A + ++ GL+
Sbjct: 476 KDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEI 535
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQK 311
F++ K Q + ++DL + +G + + M + E++P + D ++W ++ G +
Sbjct: 536 FNSMETKYQVEQKIEHYACMVDLLGR-AGKLNEAMDLIEKMPMEADAIIWGALL-GACRT 593
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRIS 370
D A KKL + P + ++ SN+ S G+ ++ +R R+S
Sbjct: 594 HMKLDLAEVAAKKL--LVLEPKNAGPFILL---SNIYASQGRWDDVAELRRNMRDRRVS 647
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 53/254 (20%)
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGS--GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ GL F L+ + F+ ++ I S LI Y++ G + VF+E+ +++ WN++
Sbjct: 78 MFSGLMFF-RLVLNRFYCSNFIISRNSLITRYSRL-GQIEKARVVFDEMRDKNIISWNSI 135
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
++GY Q + +A F K++
Sbjct: 136 VAGYFQNKR-PQEAQNMFDKMS-------------------------------------- 156
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
N IS N LV+ Y G + +AR +FDRMPE N VS +M+ GY + G+ EA LF
Sbjct: 157 ERNTISW-NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFW 215
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M E N+ +++ +L G++ E + F MM E + + MI +
Sbjct: 216 QMPEKNV----VSWTVMLGGLLQEGRIDEACRLFDMMP-----EKDVVTRTNMIGGYCQV 266
Query: 485 GKLTDAERLIEAMP 498
G+L +A L + MP
Sbjct: 267 GRLVEARMLFDEMP 280
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C G +L G+ +HA +++ Y+++ + +Y KCG L+ A F++ +
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFK 120
V +N ++ YA+ A ++F + PD V++ ++SA + G+ + L +F
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537
Query: 121 DMREK 125
M K
Sbjct: 538 SMETK 542
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 259/701 (36%), Positives = 381/701 (54%), Gaps = 78/701 (11%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV 97
N I YS+ G + A F++ + N+ S+N ++A Y + R A+ +FD++ + + +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDT-----DGFTLSGLITASSNNLCLI--KQ 150
S+N L+S Y + G A +F M E+ + G+ G+I+ + + K
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKN 221
Query: 151 LHCLAIYCG--------------FDHYAS----VNNSLLTCYSRNGFLDEAKRVFYEMGE 192
+ + G FD +++ Y + G L EA+ +F EM
Sbjct: 222 VVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPR 281
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEM-----VSLQLGLDMYTLASILTAFTSLEDL 247
++ VSW +M+ Y Q+++ A +LF+ M VS L YT L + L
Sbjct: 282 -RNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL--- 337
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
F+A IKS N+ I L +G++ +VF+++ + D W+ MI
Sbjct: 338 -----FNAMPIKSVVACNAMI------LCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS 366
Y +K D AL F+ + R G P+ S + V+S C+ L+ G++IHA ++ +
Sbjct: 387 YERKGLELD-ALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDL 445
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + V + L++MY KCGNL A+++FDR + V NS+I GYAQHG+G+EALR+F M
Sbjct: 446 D-VYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM 504
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ I P ++TFV VLSAC++TG V +G + F+ M+ + E + EHY+CM+DLLGRAGK
Sbjct: 505 HFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGK 564
Query: 487 LTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANI 529
L +A LIE MP +I A AA L LEP NA P+++L+NI
Sbjct: 565 LNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNI 624
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS-HPMIKEIHNYLEE 588
YA+ G+W++VA +RR MRDR V K PG SWI V+K++H F D S HP EI+ LE
Sbjct: 625 YASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEW 684
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+S +++AGY PD K + L +HSEKLAVA+GLL G PI VMKNLR+
Sbjct: 685 LSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRV 744
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH AIK I+ + GREI +RD RFH FKDG CSC DYW
Sbjct: 745 CGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 171/359 (47%), Gaps = 17/359 (4%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+ K + KN V ++A L Y+ CG L A FN +V + N ++ +
Sbjct: 302 IARKLFEVMPEKNEVSWTAMLKG-----YTNCGRLDEASELFNAMPIKSVVACNAMILCF 356
Query: 76 ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ + ARQ+FDQ+ + D +++ +I Y G AL LF+ M+ + + +L
Sbjct: 357 GQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLI 416
Query: 136 GLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
+++ A NL +++H + FD V + LL+ Y + G L +AK+VF +
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA-V 475
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ- 252
KD V WNS++ Y QH G+EAL++F +M + D T +L+A + ++ GL+
Sbjct: 476 KDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEI 535
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQK 311
F++ K Q + ++DL + +G + + M + E++P + D ++W ++ G +
Sbjct: 536 FNSMETKYQVEQKIEHYACMVDLLGR-AGKLNEAMDLIEKMPMEADAIIWGALL-GACRT 593
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRIS 370
D A KKL + P + ++ SN+ S G+ ++ +R R+S
Sbjct: 594 HMKLDLAEVAAKKL--LVLEPKNAGPFILL---SNIYASQGRWDDVAELRRNMRDRRVS 647
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 53/254 (20%)
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGS--GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ GL F L+ + F+ ++ I S LI Y++ G + VF+E+ +++ WN++
Sbjct: 78 MFSGLMFF-RLVLNRFYCSNFIISRNSLITRYSRL-GQIEKARVVFDEMRDKNIISWNSI 135
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
++GY Q + +A F K++
Sbjct: 136 VAGYFQNKR-PQEAQNMFDKMS-------------------------------------- 156
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
N IS N LV+ Y G + +AR +FDRMPE N VS +M+ GY + G+ EA LF
Sbjct: 157 ERNTISW-NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFW 215
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M E N+ +++ +L G++ E + F MM E + + MI +
Sbjct: 216 QMPEKNV----VSWTVMLGGLLQEGRIDEACRLFDMMP-----EKDVVTRTNMIGGYCQV 266
Query: 485 GKLTDAERLIEAMP 498
G+L +A L + MP
Sbjct: 267 GRLVEARMLFDEMP 280
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C G +L G+ +HA +++ Y+++ + +Y KCG L+ A F++ +
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFK 120
V +N ++ YA+ A ++F + PD V++ ++SA + G+ + L +F
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537
Query: 121 DMREK 125
M K
Sbjct: 538 SMETK 542
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/647 (35%), Positives = 369/647 (57%), Gaps = 40/647 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ F + L Y R+ AR++FD +P PD V +NTL+ A +E+ S + +
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLL---AGLSGSEAVESFARMVC 204
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ D TL+ ++ A++ ++ + + +H A CG + V L++ YS+ G ++
Sbjct: 205 DGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVE 264
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A R ++M E D V++N+++ Y + ++ LF E+++L L + TL +++
Sbjct: 265 SA-RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ + H ++KSGF NS + + + L+ + + DM K F+ +P+ + W
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLN-DMESARKAFDTMPEKTMESW 382
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N MISGY+Q ++ A+ F+++ ++ P+ + +SAC+ L SLGK +H +
Sbjct: 383 NAMISGYAQNG-LTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIIT 441
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ ++ N + V AL+ MY+KCG++ +ARR+F+ M N VS N+MIAGY HG G EAL
Sbjct: 442 EEDLEPN-VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEAL 500
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+L++ ML+ ++ PT+ TF+SVL AC+H G V EG K F M D + P EH +CM+DL
Sbjct: 501 KLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDL 560
Query: 481 LGRAGKLTDAERLIEAMP---FNPG---------------SIALKAANHFLQLEPSNAVP 522
LGRAG+L +A LI P PG +A A+ +L+P N+
Sbjct: 561 LGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGY 620
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N++ + ++ E A +R+ + R + K PG++ IE+ + HVF+A D +HP + I
Sbjct: 621 YVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAI 680
Query: 583 HNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLSTSYGEPILV 630
++YLE+++ KM +AGY P+ E L HSEKLA+AFGLLST G I +
Sbjct: 681 YSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRI 740
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+C DCHNA KFIS + R I VRD RFH F+DG CSCGDYW
Sbjct: 741 IKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 180/349 (51%), Gaps = 11/349 (3%)
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
LH LA+ G+ V ++L Y +D A++VF + D V WN+++
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPS-PDTVLWNTLLAGL---- 190
Query: 211 EGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
G EA++ F MV + D TLAS+L A + D+ G H+ K G ++ H+
Sbjct: 191 SGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL 250
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+GLI LY+KC GD+ +F+ + +PDLV +N +ISGYS ++ F +L +G
Sbjct: 251 TGLISLYSKC-GDVESARCLFDMMEKPDLVAYNALISGYSVNGMVG-SSVNLFTELMTLG 308
Query: 330 YHPDDCSFVCVISACSNLSPSLGKQ-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ + V +I S L Q +H +K +N V+ A+ ++ + ++E A
Sbjct: 309 LWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANS-PVSTAITTLHCRLNDMESA 367
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R+ FD MPE S N+MI+GYAQ+G+ A+ LFE M++ N+ P IT S LSACA
Sbjct: 368 RKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQL 427
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G ++ G K+ + EP + +ID+ + G +++A R+ M
Sbjct: 428 GALSLG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 39/401 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL D+ G+ +H+ K + ++ I LYSKCG + +A F+
Sbjct: 214 TLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMM 273
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ ++N L IS Y+ G S+++LF
Sbjct: 274 EKPDLVAYNAL-------------------------------ISGYSVNGMVGSSVNLFT 302
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + TL LI S + L + LH + GF + V+ ++ T + R
Sbjct: 303 ELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLN 362
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A++ F M E K SWN+M+ Y Q+ A+ LF++MV L + + T++S L
Sbjct: 363 DMESARKAFDTMPE-KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTL 421
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G H + + N ++ + LID+YAKC G + + ++F + ++
Sbjct: 422 SACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKC-GSISEARRIFNTMDNKNV 480
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V WN MI+GY + + +AL +K + P +F+ V+ ACS+ L K
Sbjct: 481 VSWNAMIAGYGLHGQGA-EALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFR 539
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
++T I I +V + + G L++A L P+
Sbjct: 540 SMTDDYAINPG-IEHCTCMVDLLGRAGQLKEAFELISEFPK 579
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 29/239 (12%)
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+ YA +++F P+PD L N ++ ++L + R+
Sbjct: 54 ATSLLLRYASLRAPTGHLLRLFRGFPRPDRFLRNALL-----------RSLPSLRP--RL 100
Query: 329 GYH-PDDCSFVCVISACSNL--------SPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
+ PD SF ++ + L S S + +HAL + ++ V +AL +Y
Sbjct: 101 LFPCPDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTF-VASALAKLY 159
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITF 438
++ AR++FD +P +TV N+++AG + G EA+ F M+ + ++ P T
Sbjct: 160 FVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMVCDGSVRPDATTL 215
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
SVL A A V G+ S + G + +I L + G + A L + M
Sbjct: 216 ASVLPAAAEVADVTMGRCVHSFAEKC-GLAEHEHVLTGLISLYSKCGDVESARCLFDMM 273
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 364/670 (54%), Gaps = 70/670 (10%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + I AR LFD++ + DLV++ +I YA+CG +L LF+ MRE+ D
Sbjct: 199 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 258
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYC---GFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
+ ++ A + L + + + Y F + +++ Y++ G ++ A+ +F
Sbjct: 259 KVAMVTVVFACAK-LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
M E K+ +SW++M+ AYG H +G +AL LF+ M+S + D TLAS+L A + +L
Sbjct: 318 DRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNL 376
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
Q HA G QN + + L+ Y+ + D +F+ + D V W+ M+ G
Sbjct: 377 TQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRA-LDDAYGLFDGMCVRDSVSWSVMVGG 435
Query: 308 YSQKEEY---------------------------SDQALGCFKKLNRVGYHPDDCSFVCV 340
+++ +Y ++++L F K+ G PD + V V
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKCGNLEDARRLFDRMP 396
+ AC+ L G A TI I+ + ++ A++ M++KCG +E AR +FDRM
Sbjct: 496 VFACAKL----GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 551
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
E N +S ++MIA Y HG G +AL LF ML + I P IT VS+L AC+H G V EG +
Sbjct: 552 EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLR 611
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
+FS+M + + + +HY+C++DLLGRAG+L +A +LIE+M
Sbjct: 612 FFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTH 671
Query: 504 ----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+A KAA L+L+P N Y++L+NIYA +G+WE+VA R LM R ++K PG++W
Sbjct: 672 KDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTW 731
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLV 607
IEV + H F D +HP KEI+ L+ + K++ GYVPD K L
Sbjct: 732 IEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILY 791
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFGL++T PI ++KNLR+CGDCH K +SAI GR I VRD RFH FK
Sbjct: 792 SHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFK 851
Query: 668 DGRCSCGDYW 677
+G CSCGDYW
Sbjct: 852 EGACSCGDYW 861
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)
Query: 132 FTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
F +S L+ + NL ++Q+H A G V N L+ YS LD+A +F M
Sbjct: 83 FYISALV--NCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 140
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
++D VSW+ MV + + + + F+E++ D YTL ++ A L++L
Sbjct: 141 -VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL---- 195
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
L+D+Y KC ++ D +F+++ + DLV W MI GY++
Sbjct: 196 -----------------QMALVDMYVKCR-EIEDARFLFDKMQERDLVTWTVMIGGYAEC 237
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISV 371
+ ++++L F+K+ G PD + V V+ AC+ L +I I+ + + +
Sbjct: 238 GK-ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 296
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
A++ MY+KCG +E AR +FDRM E N +S ++MIA Y HG G +AL LF ML + +
Sbjct: 297 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 356
Query: 432 PPTNITFVSVLSAC 445
P IT S+L AC
Sbjct: 357 LPDKITLASLLYAC 370
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 207/463 (44%), Gaps = 53/463 (11%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ N L+ Y+ + A LFD + D VS++ ++ +A GD + F+++
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
D +TL +I A + +K L +L+ Y + +++A
Sbjct: 172 RCGARPDNYTLPFVIRACRD----LKNLQM---------------ALVDMYVKCREIEDA 212
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+ +F +M E +D V+W M+ Y + + E+L LF++M + D + +++ A
Sbjct: 213 RFLFDKMQE-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK 271
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L + ++ + F + +G+ +ID+YAKC G + ++F+ + + +++ W+
Sbjct: 272 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC-GCVESAREIFDRMEEKNVISWSA 330
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKI 362
MI+ Y + +AL F+ + G PD + ++ AC N + + +Q+HA
Sbjct: 331 MIAAYGYHGQ-GRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVH 389
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM----- 417
+ N I V N LV YS L+DA LFD M ++VS + M+ G+A+ G M
Sbjct: 390 GMLQNLI-VANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGT 448
Query: 418 -----------------------EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
E+L LF+ M E + P + V+V+ ACA G + +
Sbjct: 449 FRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA 508
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++ F+ + + MID+ + G + A + + M
Sbjct: 509 RTIDDYIQRK-KFQLDVILGTAMIDMHAKCGCVESAREIFDRM 550
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 139/317 (43%), Gaps = 48/317 (15%)
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
++A + +L Q HA G +N + + LI Y+ + D +F+ + D
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRA-LDDAYGLFDGMCVRD 143
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
V W+ M+ G+++ +Y + G F++L R G PD+ + VI AC +L
Sbjct: 144 SVSWSVMVGGFAKVGDYIN-CFGTFRELIRCGARPDNYTLPFVIRACRDLK--------- 193
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ ALV MY KC +EDAR LFD+M E + V+ MI GYA+ G
Sbjct: 194 ------------NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 241
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ---KYFSMMKDMFGFEPEGEHY 474
E+L LFE M E + P + V+V+ ACA G + + + Y K F+ +
Sbjct: 242 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK----FQLDVILG 297
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ MID+ + G + A + F ++E N + + + Y G
Sbjct: 298 TAMIDMYAKCGCVESAREI------------------FDRMEEKNVISWSAMIAAYGYHG 339
Query: 535 KWEEVATIRRLMRDRGV 551
+ + + R+M G+
Sbjct: 340 QGRKALDLFRMMLSSGM 356
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 168/392 (42%), Gaps = 67/392 (17%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
L I +Y+KCGC+ +A F++ + NV S++ ++AAY
Sbjct: 296 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH----------------- 338
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHC 153
G AL LF+ M D TL+ L+ A N NL ++Q+H
Sbjct: 339 --------------GQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHA 384
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA-------- 205
A G V N L+ YS LD+A +F M ++D VSW+ MV
Sbjct: 385 QASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMC-VRDSVSWSVMVGGFAKVGDYM 443
Query: 206 --YGQHREGL------------------EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+G RE + E+L LF +M + D + +++ A L
Sbjct: 444 NCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG 503
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ ++ + F + +G+ +ID++AKC G + ++F+ + + +++ W+ MI
Sbjct: 504 AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC-GCVESAREIFDRMEEKNVISWSAMI 562
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIR 365
+ Y + +AL F + R G P+ + V ++ ACS+ + + + + ++ E
Sbjct: 563 AAYGYHGQ-GRKALDLFPMMLRSGILPNKITLVSLLYACSH-AGLVEEGLRFFSLMWEDY 620
Query: 366 SNRISVNN--ALVAMYSKCGNLEDARRLFDRM 395
S R V + +V + + G L++A +L + M
Sbjct: 621 SVRADVKHYTCVVDLLGRAGRLDEALKLIESM 652
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-- 93
L I +++KCGC+ +A F++ + NV S++ ++AAY + A LF + +
Sbjct: 526 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 585
Query: 94 --PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL 151
P+ ++ +L+ A + G E L F M E
Sbjct: 586 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED-------------------------- 619
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
++ HY V + L R G LDEA ++ M KDE W + + A H++
Sbjct: 620 --YSVRADVKHYTCVVDLL----GRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673
Query: 212 GLEALQLFQEMVSLQ 226
+ A + ++ LQ
Sbjct: 674 VVLAEKAATSLLELQ 688
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/633 (38%), Positives = 367/633 (57%), Gaps = 46/633 (7%)
Query: 87 LFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF++ + + ++ S+N++I+ A GD+ AL F MR+ + T I + S L
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 146 CLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
L +Q H A+ GF+ V+++L+ YS+ G L +A+ +F E+ ++ VSW SM+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISH-RNIVSWTSMI 225
Query: 204 VAYGQHREGLEALQLFQEMVSLQLG--------LDMYTLASILTAFTSLEDLVGGLQFHA 255
Y Q+ + AL LF+E + + G +D + S+L+A + + + H
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
LIK GF + + + L+D YAKC G++ +VF+ + + D++ WN++I+ Y+Q S
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKC-GELGVSRRVFDGMAERDVISWNSIIAVYAQNG-MS 343
Query: 316 DQALGCFKKLNRVG-YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNN 373
+++ F ++ + G + + + V+ AC++ S LGK IH IK+ + SN + V
Sbjct: 344 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESN-VFVGT 402
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+++ MY KCG +E AR+ FDRM E N S ++M+AGY HG EAL +F M + P
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
ITFVSVL+AC+H G + EG +F M F EP EHY CM+DLLGRAG L +A L
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDL 522
Query: 494 IEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKW 536
I+ M P + A A +L+P N YV+L+NIYA +G+W
Sbjct: 523 IKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRW 582
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
E+V +R LM++ G+ K PGFS +++K ++HVF+ D HP ++I+ YLE++S K+++
Sbjct: 583 EDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEV 642
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GYVPD KE L HSEKLAVAFG+++T G I ++KNLR+CGDCH AI
Sbjct: 643 GYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAI 702
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KFIS I REI VRD+ RFH F+DG CSCGDYW
Sbjct: 703 KFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 63/354 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C + + +H +K + N + Y+KCG L + F+ +
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V S+N ++A YA+ + ++F ++ + ++YN +
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV---------------------- 364
Query: 125 KRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
TLS ++ A S + L K +H I G + V S++ Y + G ++
Sbjct: 365 --------TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 416
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A++ F M E K+ SW++MV YG H EAL++F EM + + T S+L A +
Sbjct: 417 ARKAFDRMRE-KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 475
Query: 243 SLEDLVGGLQFHAHLIKSGFHQ-------------NSHIGSGLIDLYAKCSGDMRDCMKV 289
HA L++ G+H H G ++DL + +G +++ +
Sbjct: 476 -----------HAGLLEEGWHWFKAMSHEFDVEPGVEHYGC-MVDLLGR-AGYLKEAFDL 522
Query: 290 FEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ + +PD V+W ++ + + LG P +C + ++S
Sbjct: 523 IKGMKLRPDFVVWGALLGACRM---HKNVDLGEISARKLFELDPKNCGYYVLLS 573
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C GK +H +K + + ++ I +Y KCG + A AF++
Sbjct: 365 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 424
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ NV S++ ++A Y A ++F ++ +P+ +++ ++++A + G E
Sbjct: 425 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 484
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M + FD + G +HY + + L R
Sbjct: 485 HWFKAMSHE-FDVEP---------------------------GVEHYGCMVDLL----GR 512
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G+L EA + M D V W +++ A H+
Sbjct: 513 AGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHK 546
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/631 (36%), Positives = 351/631 (55%), Gaps = 41/631 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
++ AR+LFD+ P PD+ +N ++ Y+ G A+ ++ M+ DGF+ ++ A
Sbjct: 123 VSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKA 182
Query: 141 SS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE-- 196
S L + +++H GF+ V N L+ Y++ G + A VF G + D
Sbjct: 183 CSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVF---GRLVDRTI 239
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
VSW S++ Y Q+ + +EAL++F EM + D L S+L A+T +EDL G H
Sbjct: 240 VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+IK G + L LYAKC G + F ++ P L+ WN MISGY K Y++
Sbjct: 300 VIKMGLECEFDLLISLTSLYAKC-GHVMVARLFFNQVENPSLIFWNAMISGYV-KNGYAE 357
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNAL 375
+A+ F+ + PD + I+AC+ + S L + + E R N + VN +L
Sbjct: 358 EAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFR-NDVIVNTSL 416
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+ Y+KCG+++ AR +FDR+P+ + V ++M+ GY HG G E++ LF M + + P +
Sbjct: 417 IDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPND 476
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+TFV +L+AC ++G V EG F M+D +G EP +HY+C++DLLGRAG L A +
Sbjct: 477 VTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVM 535
Query: 496 AMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
MP PG ++ AA L+P N YV L+N+YA+S W+
Sbjct: 536 NMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDC 595
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
VA +R LMR++G+ K G+S IE+ ++ F A D +HP KEI +E++ R++K+AG+
Sbjct: 596 VAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGF 655
Query: 599 VP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
VP + E+ L +HSE+LA+A+GL+ST G + + KNLR C +CH AIK
Sbjct: 656 VPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKL 715
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + REI VRD RFH FKDG CSCGDYW
Sbjct: 716 ISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 149/307 (48%), Gaps = 34/307 (11%)
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
LV GLQ+ LI ++ S+IG C+ K+F++ P PD+ LWN ++
Sbjct: 99 LVTGLQYGGFLIAKLVNKASNIGE------VSCA------RKLFDKFPDPDVFLWNAIVR 146
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
YS + + A+ + ++ PD SF CV+ ACS L +G+++H +
Sbjct: 147 CYS-RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFE 205
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V N LVA+Y+KCG + A +F R+ + VS S+I+GYAQ+G +EALR+F
Sbjct: 206 SD-VFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSE 264
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M +TN+ P I VSVL A + G+ + M G E E + + L + G
Sbjct: 265 MRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKM-GLECEFDLLISLTSLYAKCG 323
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ ++ + FN Q+E + + + + + Y +G EE + RL
Sbjct: 324 HV-----MVARLFFN-------------QVENPSLIFWNAMISGYVKNGYAEEAIELFRL 365
Query: 546 MRDRGVQ 552
M+ + ++
Sbjct: 366 MKSKNIR 372
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L + YA+ + AR F+Q+ P L+ +N +IS Y G E A+ LF+ M+ K D
Sbjct: 315 LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPD 374
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---------VNNSLLTCYSRNGFLD 181
T++ I A + Q+ L + D Y S VN SL+ Y++ G +D
Sbjct: 375 SITVTSSIAACA-------QIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVD 427
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+ VF + + KD V W++M+V YG H +G E++ LF M + + T +LTA
Sbjct: 428 MARFVFDRIPD-KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTAC 486
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ + G + G + ++DL + +G + +P +P + +
Sbjct: 487 KNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGR-AGHLDRAYNFVMNMPIEPGVSV 545
Query: 301 WNTMISG 307
W ++S
Sbjct: 546 WGALLSA 552
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV S G + AR+LFD+ P+ + N+++ Y++HG A+ ++ M + P
Sbjct: 113 LVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPD 172
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+F VL AC+ + G++ + GFE + + ++ L + G++ A +
Sbjct: 173 GFSFPCVLKACSALPALEMGRRVHGQIF-RHGFESDVFVQNGLVALYAKCGEIVRANAV- 230
Query: 495 EAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
F +L V + + + YA +G+ E I MR V+
Sbjct: 231 -----------------FGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP- 272
Query: 555 PGFSWIEVKKQMHVFV-AEDGSHPMIKEIHNYLEEM 589
WI + + + ED H K IH + +M
Sbjct: 273 ---DWIALVSVLRAYTDVEDLEHG--KSIHGCVIKM 303
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/663 (36%), Positives = 367/663 (55%), Gaps = 46/663 (6%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+S HH H + F N+LL + + LF P++ YNTLI+ + +
Sbjct: 34 VSLIHHHL----HHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVN 167
L LF +R+ + GFT ++ A ++N L LH L + CGF+H +
Sbjct: 90 HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQEMVS 224
SLL+ YS +G L++A +VF E+ E + V+W ++ Y G+HRE A+ LF++MV
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPE-RSVVTWTALFSGYTTAGKHRE---AIDLFKKMVE 205
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + D Y + +L+A + DL G H+ + +NS + + L++LYAKC G M
Sbjct: 206 MGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKC-GKME 264
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
VF+ + + D+V W+TMI GY+ + + + F ++ + PD S V +S+C
Sbjct: 265 KARSVFDSMGEKDIVTWSTMIQGYASNS-FPKEGIEFFLQMLQENLKPDQFSIVGFLSSC 323
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
++L LG+ +L + E +N + + NAL+ MY+KCG + +F M E + V +
Sbjct: 324 ASLGALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+ I+G A++G + +F + I P TF+ +L C H G + +G ++F+ +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAA-------------- 509
++ + EHY CM+DL GRAG L DA RLI MP P +I A
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 510 ---NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
+ LEP NA YV L+NIY+ SG+W+E A +R +M +G++K PG+SWIE++ +
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTV 562
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLA 614
H F+A+D SHP+ +I+ LE++ +M+ G+VP +KE+ L HHSEKLA
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLA 622
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
VAFGL+ST +G+ I V+KNLR+CGDCH +K IS I REI VRD RFHCF +G CSC
Sbjct: 623 VAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCN 682
Query: 675 DYW 677
DYW
Sbjct: 683 DYW 685
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/710 (34%), Positives = 392/710 (55%), Gaps = 73/710 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ Q++ CV ++ K L + +L P ++L N + LY+K G L A + F++
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++FS+N LL+AYA+ I + + FD++P D VSYNT I+ ++ + +L LFK
Sbjct: 85 LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + F+ +T+ ++ AS+ ++L KQ+H I F + N+L Y++ G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ +F + + K+ VSWN M+ Y ++ + + + L +M D T+++I+
Sbjct: 205 EIEQARWLFDCLTK-KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A Y +C G + + +VF E + D+
Sbjct: 264 AA-----------------------------------YCQC-GRVDEARRVFSEFKEKDI 287
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V W M+ GY++ D AL F ++ PD + V+S+C+ L S G+ +H
Sbjct: 288 VCWTAMMVGYAKNGREED-ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHG 346
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+I + +N + V++AL+ MYSKCG ++DAR +F+ MP N VS N+MI G AQ+G
Sbjct: 347 KSILAGLNNNLL-VSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL LFE ML+ P N+TF+ +LSAC H + +GQ+YF + + G P +HY+CM
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACM 465
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSI--ALKAANHFLQLEPSNA 520
++LLGR G++ A LI+ M +P G I A AA H +L+P+ A
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
VPY+ML+N+YA+ G+W++VA++R LM+ + V+K GFSWIE+ ++H F +ED +HP +
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG-EP 627
+I+ L + K+++ G+ P +K K + HSEKLA+AFGL+ G P
Sbjct: 586 DIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISP 645
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KN+RIC DCH +KF S I GR+I +RD+ RFH F G+CSC D W
Sbjct: 646 IRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 169/357 (47%), Gaps = 55/357 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLH-ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T +L DL GK +H ++ ++N + + ++ N +Y+KCG + A F+
Sbjct: 157 TIVSILNASAQLSDLRYGKQIHGSIIVRNFLG-NVFIWNALTDMYAKCGEIEQARWLFDC 215
Query: 60 TQHANVFSFNVLLAAYAR------------QLRIA-----------------------SA 84
N+ S+N++++ YA+ Q+R++ A
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEA 275
Query: 85 RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN 144
R++F + + D+V + ++ YA G E AL LF +M + + D +TLS ++++ +
Sbjct: 276 RRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKL 335
Query: 145 LCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
L + +H +I G ++ V+++L+ YS+ GF+D+A+ VF M ++ VSWN+M
Sbjct: 336 ASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM-PTRNVVSWNAM 394
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+V Q+ +AL+LF+ M+ + D T IL+A + G ++ +
Sbjct: 395 IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSIT---- 450
Query: 263 HQNSHIGSGLIDLYAKC-------SGDMRDCMKVFEEIPQ-PDLVLWNTMISGYSQK 311
N H + +D YA C +G + + + + + PD ++W+T++S S K
Sbjct: 451 --NQHGMTPTLDHYA-CMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTK 504
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/660 (37%), Positives = 369/660 (55%), Gaps = 61/660 (9%)
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ H+ F ++ + +Q R+ A +IPQP Y+TLI+A E +
Sbjct: 27 SHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVH 86
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG--------FDHYASVN---- 167
+ F + G++ SN L +H A CG FD +
Sbjct: 87 AHTKASNF------IPGIVI--SNRL-----IHMYA-KCGSLVDAQMLFDEIPQKDLCSW 132
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N++++ Y+ G +++A+++F EM +D SWN+++ Y +EAL LF+ M +
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPH-RDNFSWNAVISGYVSQGWYMEALDLFRMMQENES 191
Query: 228 -GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+M+TL+S L A ++ L G + H +LI+SG + + + L+DLY KC G + +
Sbjct: 192 SNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKC-GSLNEA 250
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+F+++ D+V W TMI ++ + F+ L G P++ +F V++AC++
Sbjct: 251 RGIFDQMADKDIVSWTTMIH-RCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACAD 309
Query: 347 LSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ +GK++H ++ + + ALV +YSKCGN E ARR+F++MP + VS S
Sbjct: 310 LAAEQMGKEVHGYMTRVGYDPFSFAAS-ALVHVYSKCGNTETARRVFNQMPRPDLVSWTS 368
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+I GYAQ+G AL+ FE +L + P ITFV VLSAC H G V G +YF +K+
Sbjct: 369 LIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKH 428
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KA 508
G +HY+C+IDLL R+G+ +AE +I+ MP P G+I L +A
Sbjct: 429 GLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERA 488
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A +LEP N Y+ L+NIYA +G W E +R M +RG+ KKPG SWIE+K+Q+HV
Sbjct: 489 AKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHV 548
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D SHP I +IH YL E+S+KMK+ GYV D KE+ + +HSEKLAVA
Sbjct: 549 FLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVA 608
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FG++STS G PI V KNLR C DCHNA+K+IS I R+I VRD+ RFHCF DG CSC DY
Sbjct: 609 FGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/724 (34%), Positives = 385/724 (53%), Gaps = 89/724 (12%)
Query: 40 FILLYSKCGCLSAAH-----HAFNQTQH--ANVFSFNVLLAAYARQLRIASARQLFDQIP 92
F ++ CG +S+ HA + +NVF N L+A Y+R ++ AR++FD++
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLIT--ASSNNLCLIK 149
D+VS+N++I +YA G + AL +F M E D TL ++ AS L K
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLHC A+ V N L+ Y++ G +DEA VF M +KD VSWN+MV Y Q
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVSWNAMVAGYSQI 308
Query: 210 REGLEALQLFQEMVSLQLGLDMYT-----------------------------------L 234
+A++LF++M ++ +D+ T L
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIK-------SGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
S+L+ S+ L+ G + H + IK +G + + + LID+YAKC +
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK-KVDTAR 427
Query: 288 KVFEEIP--QPDLVLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISA 343
+F+ + + D+V W MI GYSQ + +++AL ++ P+ + C + A
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGD-ANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C++L+ +GKQIHA ++ + + + V+N L+ MY+KCG++ DAR +FD M N V+
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
S++ GY HG G EAL +F+ M +T + VL AC+H+G + +G +YF+ MK
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK 507
+FG P EHY+C++DLLGRAG+L A RLIE MP P G + L
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 508 --AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
AA +L ++ Y +L+N+YA +G+W++V IR LMR +GV+K+PG SW+E K
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKG 726
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKL 613
F D +HP KEI+ L + +++K GYVP +K+ L HSEKL
Sbjct: 727 TTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKL 786
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+A+G+L+T G I + KNLR+CGDCH A ++S I +I +RD+ RFH FK+G CSC
Sbjct: 787 ALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846
Query: 674 GDYW 677
YW
Sbjct: 847 KGYW 850
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 245/551 (44%), Gaps = 82/551 (14%)
Query: 62 HANVFSFNVL--------LAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGD 111
H + SF +L ++ Y ++ A L + P D + +N+LI +Y D G
Sbjct: 48 HQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGC 107
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNS 169
L LF M + D +T + A +++ + H L++ GF V N+
Sbjct: 108 ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNA 167
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ YSR L +A++VF EM + D VSWNS++ +Y + + AL++F M + + G
Sbjct: 168 LVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN-EFGC 225
Query: 230 --DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D TL ++L SL G Q H + S QN +G+ L+D+YAKC G M +
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC-GMMDEAN 284
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSD------------------------------- 316
VF + D+V WN M++GYSQ + D
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 317 ---QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIK--IEIRSN--- 367
+ALG +++ G P++ + + V+S C+++ + GK+IH IK I++R N
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 368 -RISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIGMEALRLFE 424
V N L+ MY+KC ++ AR +FD + E + V+ MI GY+QHG +AL L
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 425 WMLETN--IPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLL 481
M E + P T L ACA + G++ + +++ P +C+ID+
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMY 523
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
+ G ++DA RL+ F + N V + L Y G EE
Sbjct: 524 AKCGSISDA-RLV-----------------FDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 542 IRRLMRDRGVQ 552
I MR G +
Sbjct: 566 IFDEMRRIGFK 576
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 211/485 (43%), Gaps = 82/485 (16%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WNS++ +YG + + L LF M SL D YT + A + + G HA +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+GF N +G+ L+ +Y++C + D KVF+E+ D+V WN++I Y+ K A
Sbjct: 155 VTGFISNVFVGNALVAMYSRCR-SLSDARKVFDEMSVWDVVSWNSIIESYA-KLGKPKVA 212
Query: 319 LGCFKKL-NRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
L F ++ N G PD+ + V V+ C++L + SLGKQ+H + E+ N + V N LV
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN-MFVGNCLV 271
Query: 377 AMYSKC-------------------------------GNLEDARRLFDRMPEH----NTV 401
MY+KC G EDA RLF++M E + V
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ------ 455
+ ++ I+GYAQ G+G EAL + ML + I P +T +SVLS CA G + G+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 456 -KY-FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFL 513
KY + K+ G E + +ID+ + K+ A + ++ L
Sbjct: 392 IKYPIDLRKN--GHGDENMVINQLIDMYAKCKKVDTARAMFDS----------------L 433
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP-------------GFSWI 560
+ + V + ++ Y+ G + + M + Q +P + +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLL 620
+ KQ+H + + + + + N L +M K G + D + K V + L
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK---CGSISDARLVFDNMMAKNEVTWTSL 550
Query: 621 STSYG 625
T YG
Sbjct: 551 MTGYG 555
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EH 398
I C +S K IH + I + +++ + L++ Y G L A L R P +
Sbjct: 35 IHKCKTISQV--KLIHQKLLSFGILT--LNLTSHLISTYISVGCLSHAVSLLRRFPPSDA 90
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
NS+I Y +G + L LF M + P N TF V AC V G+
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + GF + ++ + R L+DA ++ + M
Sbjct: 151 A-LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/636 (36%), Positives = 361/636 (56%), Gaps = 47/636 (7%)
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
+A ++FD++ + ++V++ +I+ G A+ F DM F++D FTLS + +A +
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 143 N--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKDEV 197
NL L KQLH AI G V SL+ Y++ +G +D+ ++VF M E +
Sbjct: 281 ELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVM 337
Query: 198 SWNSMVVAYGQH-REGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
SW +++ Y ++ EA+ LF EM++ + + +T +S A +L D G Q
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
K G NS + + +I ++ K S M D + FE + + +LV +NT + G + +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVK-SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF- 455
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNA 374
+QA ++ +F ++S +N+ S G+QIH+ +K+ + N+ V NA
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ-PVCNA 514
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++MYSKCG+++ A R+F+ M N +S SMI G+A+HG + L F M+E + P
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+T+V++LSAC+H G V+EG ++F+ M + +P+ EHY+CM+DLL RAG LTDA I
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 495 EAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWE 537
MPF + + AA L+L+P+ Y+ L+NIYA +GKWE
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWE 694
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
E +RR M++R + K+ G SWIEV ++H F D +HP +I++ L+ + ++K+ G
Sbjct: 695 ESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754
Query: 598 YVPDKE----------------KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
YVPD + + L HSEK+AVAFGL+STS P+ V KNLR+CGDCH
Sbjct: 755 YVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCH 814
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NA+K+IS ++GREI +RD RFH FKDG+CSC DYW
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 241/506 (47%), Gaps = 43/506 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK+C+ RD GK +HA ++ + + L N I LYSK G + A F
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + + D+VS++ +++ Y + G A+ +F
Sbjct: 124 R----------------------------RFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSR- 176
+ E + + + +I A SN+ + L H+ S V SL+ + +
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 177 -NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
N F + A +VF +M E+ + V+W M+ Q EA++ F +MV D +TL+
Sbjct: 216 ENSF-ENAYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEI 293
S+ +A LE+L G Q H+ I+SG + + L+D+YAKCS D + DC KVF+ +
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLS-PSL 351
++ W +I+GY + + +A+ F ++ G+ P+ +F AC NLS P +
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQ+ K + SN SV N++++M+ K +EDA+R F+ + E N VS N+ + G
Sbjct: 392 GKQVLGQAFKRGLASNS-SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
++ +A +L + E + + TF S+LS A+ G + +G++ S + + G
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQ 509
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +I + + G + A R+ M
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFM 535
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 38 NHFIL--LYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLF 88
NHF + CG LS AF + +N N +++ + + R+ A++ F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI 148
+ + + +LVSYNT + + E A L ++ E+ FT + L++ +N +
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 149 K--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K Q+H + G V N+L++ YS+ G +D A RVF M E ++ +SW SM+ +
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM-ENRNVISWTSMITGF 550
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-----FHAHLIKSG 261
+H + L+ F +M+ + + T +IL+A + + + G + + H IK
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ ++DL + +G + D + +P Q D+++W T +
Sbjct: 611 MEHY----ACMVDLLCR-AGLLTDAFEFINTMPFQADVLVWRTFL 650
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+D T +S+L + D G HA LI+ +S + + LI LY+K SGD
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK-SGDSAKAED 118
Query: 289 VFEEIP---QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VFE + + D+V W+ M++ Y D A+ F + +G P+D + VI ACS
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELD-AIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 346 NLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN-LEDARRLFDRMPEHNTVSL 403
N +G+ +K + + V +L+ M+ K N E+A ++FD+M E N V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
MI Q G EA+R F M+ + T SV SACA ++ G++ S
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 318 ALGCFKKLNRVGYHP-DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
A+ + R G P D +F ++ +C LGK +HA I+ +I + + + N+L
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-LYNSL 103
Query: 376 VAMYSKCGNLEDARRLFD---RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
+++YSK G+ A +F+ R + + VS ++M+A Y +G ++A+++F LE +
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
P + + +V+ AC+++ V G+ + FE +
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L + G+ +H+ +K + + + N I +YSKCG + A FN
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 61 QHANVFSFNVLLAAYARQ---LRIASA-RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
++ NV S+ ++ +A+ +R+ Q+ ++ +P+ V+Y ++SA + G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 117 SLFKDMRE 124
F M E
Sbjct: 596 RHFNSMYE 603
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 266/782 (34%), Positives = 403/782 (51%), Gaps = 119/782 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F + L+ C+ R L+T LHA P +L+ I LY+ G L AA F
Sbjct: 35 SFLRALR-CLHAR-LLTSALLHA-------PPHPHLTLRLIHLYTLSGDLPAAATLFRAD 85
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSL 118
+ L+AAYA R+ +A FD +PQ D V +N +ISAYA A+++
Sbjct: 86 PCP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAV 143
Query: 119 FKDM-REKRFDTDGFTLSGLITASSN--NLCL--IKQLHCLAIYCGFDHYASVNNSLLTC 173
F+ + D ++ + L++A+ + N+ + QL C + G SV+N+L+
Sbjct: 144 FRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVAL 203
Query: 174 Y----------------------------------SRNGFLDEAKRVFYEMGEIKDEVSW 199
Y R G + A+ VF E+ ++K +V W
Sbjct: 204 YMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEV-DVKFDVVW 262
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL-- 257
N+M+ Y +EA +LF+ MV ++ LD +T S+L+A + G H +
Sbjct: 263 NAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITR 322
Query: 258 IKSGFHQNS--HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK---- 311
++ F + + + L+ LY+KC G++ ++F+ + D+V WNT++SGY +
Sbjct: 323 LQPNFVPEAALPVNNALVTLYSKC-GNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLD 381
Query: 312 ------EE--------------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
EE +S+ AL F ++ P D ++ ISAC
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACG 441
Query: 346 NL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L S GKQ+H +++ + S NAL+ MY++CG +++A +F MP ++VS N
Sbjct: 442 ELGSLKHGKQLHGHLVQLGFEGSN-SAGNALITMYARCGAVKEANLMFLVMPNIDSVSWN 500
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI+ QHG G EAL LF+ M+ I P I+F++VL+AC H+G V EG +YF MK
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD 560
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--K 507
FG P +HY+ +IDLLGRAG++ +A LI+ MPF P G + L
Sbjct: 561 FGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA+ ++ P + Y++L+N Y+A+G+W + A +R+LMRDRGV+K+PG SWIE ++H
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVH 680
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
VFV D HP +++ +LE + +M++ GYVPD KE L HSE+LAV
Sbjct: 681 VFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAV 740
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
FGLL G + V+KNLRIC DCH + F+S GREI VRD RFH FKDG CSCG+
Sbjct: 741 GFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 800
Query: 676 YW 677
YW
Sbjct: 801 YW 802
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/661 (37%), Positives = 363/661 (54%), Gaps = 59/661 (8%)
Query: 53 AHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
A + F++ N S+N L++ Y + ++ AR+ FD +P+ ++VS+ ++ Y G
Sbjct: 66 ARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLV 125
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A +LF M EK + L GLI + + I D A N +++
Sbjct: 126 SEAETLFWQMPEKNVVSWTVMLGGLIQVRR----IDEARGLFDIMPVKDVVARTN--MIS 179
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-----VSLQL 227
Y + G L EA+ +F EM ++ +SW +M+ Y Q+ + A +LF+ M VS
Sbjct: 180 GYCQEGRLAEARELFDEMPR-RNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTA 238
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
L YT + + L F A +K+ N+ I L +G++
Sbjct: 239 MLMGYTQGGRIEEASEL--------FDAMPVKAVVACNAMI------LGFGQNGEVAKAR 284
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF++I + D W+ MI Y +K + +AL F + R G + S + V+S C++L
Sbjct: 285 QVFDQIREKDDGTWSAMIKVYERKG-FEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S G+Q+HA +K + S+ + V + L+ MY KCG+L AR++FDR + V NS+
Sbjct: 344 ASLDHGRQVHAELVKSQFDSD-VFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSI 402
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I GYAQHG+ EAL++F M + + +TFV VLSAC++TGKV EG + F MK +
Sbjct: 403 ITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYL 462
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAA 509
EP+ EHY+CM+DLLGRAG + DA LI+ MP +I A AA
Sbjct: 463 VEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAA 522
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
LQLEP NA PY++L+NIYA+ G+W +VA +RR MR + V K PG SWIEV+K++H+F
Sbjct: 523 KKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMF 582
Query: 570 VAEDGS-HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
+ HP + I LE++ +++AGY PD K + L HHSE+LAVA
Sbjct: 583 TGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVA 642
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGLL G PI VMKNLR+CGDCH+AIK I+ I GREI +RD RFH FKDG CSC DY
Sbjct: 643 FGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDY 702
Query: 677 W 677
W
Sbjct: 703 W 703
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 191/418 (45%), Gaps = 44/418 (10%)
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
++YN+ I+ YA G ESA +F +M +K G+++ +S +
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDK----------GIVSWNSMVAGYFQNNRPREA 66
Query: 157 YCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
FD N N L++ Y +N + EA++ F M E ++ VSW +MV Y Q EG
Sbjct: 67 RYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPE-RNVVSWTAMVRGYVQ--EG 123
Query: 213 L--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
L EA LF +M + + + L +++ G F +K + +
Sbjct: 124 LVSEAETLFWQMPEKNV-VSWTVMLGGLIQVRRIDEARG--LFDIMPVKDVVAR-----T 175
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
+I Y + G + + ++F+E+P+ +++ W TMISGY Q + + +KL V
Sbjct: 176 NMISGYCQ-EGRLAEARELFDEMPRRNVISWTTMISGYVQNGQ-----VDVARKLFEVMP 229
Query: 331 HPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDAR 389
++ S+ ++ + + G +I + + + V NA++ + + G + AR
Sbjct: 230 EKNEVSWTAML-----MGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKAR 284
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
++FD++ E + + ++MI Y + G +EAL LF M + + +SVLS CA
Sbjct: 285 QVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLA 344
Query: 450 KVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
+ G Q + ++K F+ + S +I + + G L A ++ + F+P I +
Sbjct: 345 SLDHGRQVHAELVKSQ--FDSDVFVASVLITMYVKCGDLVKARQIFDR--FSPKDIVM 398
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L G+ +HA +K+ ++++ I +Y KCG L A F++ +
Sbjct: 336 VLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKD 395
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +N ++ YA+ + A Q+F ++ D V++ ++SA + G + L +F+
Sbjct: 396 IVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFE 455
Query: 121 DMREK 125
M+ K
Sbjct: 456 SMKSK 460
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/709 (33%), Positives = 382/709 (53%), Gaps = 101/709 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C L TGK +H +K + + +++ + +YSKC CL A + F
Sbjct: 136 TLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF--- 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F + + V + +++ YA G++ A+ FK
Sbjct: 193 ---------------------------FSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFK 225
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR + +++ FT ++TA S + +Q+H I+ GF V ++L+ Y++ G
Sbjct: 226 EMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCG 285
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+ + M EI D V WNSM+V H EAL LF +M + + +D +T S+L
Sbjct: 286 DLASARMILDTM-EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVL 344
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ S ++L G H+ IK+GF + + L+D+YAK G++ + VF +I D+
Sbjct: 345 KSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAK-QGNLSCALDVFNKILDKDV 403
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W ++++GY + ++AL F + D CV SAC+ L+ G+Q+HA
Sbjct: 404 ISWTSLVTGYVHNG-FHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHA 462
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK S +S N+L+ MY+KCG LE
Sbjct: 463 NFIKSSAGS-LLSAENSLITMYAKCGCLE------------------------------- 490
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A+R+F+ M N+ I++ +++ A G V GQ YF M+ ++G +P +HY+CM
Sbjct: 491 DAIRVFDSMETRNV----ISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACM 546
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNA 520
IDLLGRAGK+ +AE L+ M P G++ L +A + ++LEPSN+
Sbjct: 547 IDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNS 606
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+PYV+L+N+++ +G+WE+ A IRR M+ G+ K+PG+SWIE+K Q+H F++ED SHP+
Sbjct: 607 LPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAA 666
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI++ ++EM +K+AG+VPD KE+ L +HSEKLAVAFGLL+ + G PI
Sbjct: 667 EIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPI 726
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+A+K+IS+I R I +RD FH F +G+CSCGD+W
Sbjct: 727 RIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 256/487 (52%), Gaps = 19/487 (3%)
Query: 22 HALYLK---NLVPFSAYL-SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
H L+++ + +S+ L SN + SK G + A F+Q + + +++N++++AYA
Sbjct: 21 HPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYAN 80
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
+ AR+LF++ P + +++++L+S Y G L F M +TL +
Sbjct: 81 LGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSV 140
Query: 138 ITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
+ A S L L+ K +HC AI + V L+ YS+ L EA+ +F+ + + K
Sbjct: 141 LRACST-LSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRK 199
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+ V W +M+ Y Q+ E L+A+Q F+EM + + + +T SILTA TS+ G Q H
Sbjct: 200 NYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVH 259
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+I SGF N ++ S L+D+YAKC GD+ + + + D+V WN+MI G Y
Sbjct: 260 GCIIWSGFGPNVYVQSALVDMYAKC-GDLASARMILDTMEIDDVVCWNSMIVG-CVTHGY 317
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCV---ISACSNLSPSLGKQIHALTIKIEIRSNRISV 371
++AL F K++ DD ++ V +++C NL +G+ +H+LTIK + + +V
Sbjct: 318 MEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNL--KIGESVHSLTIKTGFDACK-TV 374
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+NALV MY+K GNL A +F+++ + + +S S++ GY +G +AL+LF M +
Sbjct: 375 SNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARV 434
Query: 432 PPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
V SACA + G Q + + +K G E+ +I + + G L DA
Sbjct: 435 DLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAEN--SLITMYAKCGCLEDA 492
Query: 491 ERLIEAM 497
R+ ++M
Sbjct: 493 IRVFDSM 499
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 328/540 (60%), Gaps = 39/540 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y + G L +A+ VF +M + ++ VSW +M+ AY + +AL+ M+ +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPD-RNVVSWTTMISAYSAAKLNDKALEFLVLMLREGV 62
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+M+T +S+L A L +L Q H +IK G + + S LID+Y++ G++ + +
Sbjct: 63 RPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRW-GELENAL 118
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF+E+ DLV+W+++I+G++Q + D+AL FK++ R G+ + V+ AC+ L
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSD-GDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LG+Q+H +K + + +NNAL+ MY KCG+LEDA +F RM E + +S ++M
Sbjct: 178 ALLELGRQVHVHVLKYD---QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IAG AQ+G EAL+LFE M I P +T V VL AC+H G V EG YF MK++FG
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
+P EHY CMIDLLGRAG+L++A LI M P + +A+ AA
Sbjct: 295 IDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAA 354
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
L+L+P +A YV+L+NIYA + +W +VA +RR M +RG++K+PG SWIEV KQ+H F
Sbjct: 355 KQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAF 414
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAF 617
+ D SHP I+EI+ L ++ K+ GYVPD + L +HSEKLA+ F
Sbjct: 415 ILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVF 474
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+S G+ I + KNLRICGDCH K ++ + R I +RD R+H F+DG CSCGD+W
Sbjct: 475 GLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 155/281 (55%), Gaps = 6/281 (2%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F N+L+ Y + + A+ +FD++P ++VS+ T+ISAY+ + AL M +
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+ FT S ++ A + L ++QLHC I G D V ++L+ YSR G L+ A R
Sbjct: 61 GVRPNMFTYSSVLRA-CDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALR 119
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
VF EM D V W+S++ + Q+ +G EAL+LF+ M TL S+L A T L
Sbjct: 120 VFDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L G Q H H++K + Q+ + + L+D+Y KC G + D VF + + D++ W+TMI
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKC-GSLEDANAVFVRMVEKDVISWSTMI 235
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+G +Q YS +AL F+ + +G P+ + V V+ ACS+
Sbjct: 236 AGLAQN-GYSKEALKLFESMKVLGIKPNYVTIVGVLFACSH 275
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 134/251 (53%), Gaps = 12/251 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF + L+ Y+R + +A ++FD++ DLV ++++I+ +A D + AL LFK M
Sbjct: 96 SDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRM 155
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ F TL+ ++ A + L L +Q+H + +D +NN+LL Y + G L
Sbjct: 156 KRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVL--KYDQDLILNNALLDMYCKCGSL 213
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++A VF M E KD +SW++M+ Q+ EAL+LF+ M L + + T+ +L A
Sbjct: 214 EDANAVFVRMVE-KDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFA 272
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQN---SHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+ + GL ++ H +K F + H G +IDL + +G + + + + E+ +P
Sbjct: 273 CSHAGLVEEGL-YYFHSMKELFGIDPGREHYGC-MIDLLGR-AGRLSEAVDLINEMECEP 329
Query: 297 DLVLWNTMISG 307
D V W +++
Sbjct: 330 DAVTWRALLNA 340
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 38/229 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +H LK L+N + +Y KCG L A+ F +
Sbjct: 166 TLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRM 223
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S++ ++A A+ A +LF+ + +P+ V+ ++ A + G E L
Sbjct: 224 VEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGL 283
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+E I G +HY + + L R
Sbjct: 284 YYFHSMKE----------------------------LFGIDPGREHYGCMIDLL----GR 311
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
G L EA + EM D V+W +++ A HR A+ ++++ L
Sbjct: 312 AGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRL 360
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/651 (38%), Positives = 368/651 (56%), Gaps = 41/651 (6%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSL 118
HA++ + N LL YA+ I LF+ P P ++V++ TLI+ + AL+
Sbjct: 128 NHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTF 187
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR + FT S ++ A ++ L +Q+H L F + V +LL Y++
Sbjct: 188 FNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAK 247
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A+ VF EM ++ VSWNSM+V + +++ A+ +F+E++SL G D +++S
Sbjct: 248 CGSMLLAENVFDEMPH-RNLVSWNSMIVGFVKNKLYGRAIGVFREVLSL--GPDQVSISS 304
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A L +L G Q H ++K G ++ + L+D+Y KC G D K+F
Sbjct: 305 VLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC-GLFEDATKLFCGGGDR 363
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D+V WN MI G + + +QA F+ + R G PD+ S+ + A ++++ + G I
Sbjct: 364 DVVTWNVMIMGCFRCRNF-EQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMI 422
Query: 356 HALTIKI-EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
H+ +K ++++RIS ++LV MY KCG++ DA ++F EHN V +MI + QHG
Sbjct: 423 HSHVLKTGHVKNSRIS--SSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHG 480
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
EA++LFE ML + P ITFVSVLSAC+HTGK+ +G KYF+ M ++ +P EHY
Sbjct: 481 CANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHY 540
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEP 517
+CM+DLLGR G+L +A R IE+MPF P S+ A A +LEP
Sbjct: 541 ACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEP 600
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N Y++L+NIY G EE +RRLM GV+K+ G SWI+VK + VF A D SH
Sbjct: 601 DNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHS 660
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+EI+ L+++ +K+ GYV + +E+ L HSEKLA+AFGLL G
Sbjct: 661 RTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSLWCHSEKLALAFGLLVLPPGS 720
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ + KNLR CGDCH +KF S I REI VRD RFH F +G CSC DYW
Sbjct: 721 PVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 137/313 (43%), Gaps = 45/313 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C G +L GK +H +K + Y+ N + +Y KCG
Sbjct: 301 SISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFE--------- 351
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A +LF D+V++N +I C + E A + F+
Sbjct: 352 ----------------------DATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQ 389
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + D + S L AS++ L + +H + G + +++SL+T Y + G
Sbjct: 390 AMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCG 449
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A +VF E E + V W +M+ + QH EA++LF+EM++ + + T S+L
Sbjct: 450 SMLDAYQVFRETKE-HNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVL 508
Query: 239 TAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+A + + G ++ + H IK G + ++DL + G + + + E +
Sbjct: 509 SACSHTGKIDDGFKYFNSMANVHNIKPGLEHY----ACMVDLLGRV-GRLEEACRFIESM 563
Query: 294 P-QPDLVLWNTMI 305
P +PD ++W ++
Sbjct: 564 PFEPDSLVWGALL 576
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/707 (33%), Positives = 370/707 (52%), Gaps = 69/707 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK C GK +H LK + ++ N +L+Y +C C
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC--------------- 144
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ AR +FD++ + D+VS++T+I + + + + AL L ++M
Sbjct: 145 ----------------VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNF 188
Query: 125 KRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASV--NNSLLTCYSRNGFL 180
+ + ++ A + N+ + K +H I + + V +LL Y++ G L
Sbjct: 189 MQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHL 248
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+++F + + K VSW +M+ + E +LF M + + T+ S++
Sbjct: 249 GLARQLFNGLTQ-KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVE 307
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L G Q HA+++++GF + + + L+D+Y KCS D+R+ +F+ D+++
Sbjct: 308 CGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCS-DIRNARALFDSTQNRDVMI 366
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W M+S Y+Q DQA F ++ G P + V ++S C+ LGK +H+
Sbjct: 367 WTAMLSAYAQAN-CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYI 425
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K + + I +N ALV MY+KCG++ A RLF + N++I G+A HG G EA
Sbjct: 426 DKERVEVDCI-LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L +F M + P +ITF+ +L AC+H G V EG+K F M FG P+ EHY CM+D
Sbjct: 485 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 544
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
LLGRAG L +A +I++MP P +I AA L++EP N
Sbjct: 545 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 604
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
V+++NIYAA+ +W + A +R+ M+ G++K+PG S IEV +H F+ D SHP I+ I
Sbjct: 605 NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 664
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L EM RK+ +AGYVPD KE L +HSEKLA+AFGL+ST+ PI +
Sbjct: 665 NEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRI 724
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+C DCH A K +S I GR I VRD RFH F++G CSCGDYW
Sbjct: 725 VKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 342/561 (60%), Gaps = 36/561 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H I ++ + L+ Y++ L +A+RV EM E ++ VSW +M+ Y Q
Sbjct: 30 QRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-RNVVSWTAMISGYSQ 88
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
EAL LF EM+ + +T A++LT+ TS G Q H+ +IK+ F + +
Sbjct: 89 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+YAK +G + + +VF+ +P+ D+V +ISGY+Q ++AL F++L R
Sbjct: 149 GSSLLDMYAK-AGKICEARRVFDGLPERDVVSCTAIISGYAQLG-LDEEALDLFRRLQRE 206
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + ++ V++A S L+ G+Q+H+ ++ ++ + + N+L+ MYSKCG+L
Sbjct: 207 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL-PFYVVLQNSLIDMYSKCGSLTY 265
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACA 446
+RR+FD MPE +S N+M+ GY++HG+G EA+ LF+ M E N + P ++TF++VLS C+
Sbjct: 266 SRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 325
Query: 447 HTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-- 503
H G G + ++ M+ GFEPE EHY C++DL GRAG++ +A I+ MPF P +
Sbjct: 326 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 385
Query: 504 ---------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
I A L++E NA YV+L+N+YA++G+W++V T+R LM++
Sbjct: 386 WGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKE 445
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
+ V K+PG SWIE+ + +H F A D SHP +E+ + E+S K+K+AGYVP+
Sbjct: 446 KAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYD 505
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KEK L HSEKLA+AFGL+ T G P+ ++KNLRIC DCHN KF+S + GRE++
Sbjct: 506 VDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVS 565
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
+RD RFH G CSCGDYW
Sbjct: 566 LRDKNRFHHIVGGTCSCGDYW 586
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 21/305 (6%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA---------NVFSF 68
G + AL+L + S N F C S++ + H+ ++F
Sbjct: 90 GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG 149
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ LL YA+ +I AR++FD +P+ D+VS +IS YA G E AL LF+ ++ +
Sbjct: 150 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 209
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
++ T + ++TA S L +Q+H + Y + NSL+ YS+ G L ++R+
Sbjct: 210 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFT--S 243
F M E + +SWN+M+V Y +H G EA++LF+ M ++ D T ++L+ +
Sbjct: 270 FDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 328
Query: 244 LEDLVGGLQFHAHLI--KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ED GL+ ++ K GF ++DL+ + +G + + + +++P +P +
Sbjct: 329 MEDR--GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR-AGRVEEAFEFIKKMPFEPTAAI 385
Query: 301 WNTMI 305
W +++
Sbjct: 386 WGSLL 390
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL G L G+ +H+ L+ +PF L N I +YSKCG L+ + F+
Sbjct: 214 TYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSM 273
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-----PDLVSYNTLISAYADCGDTESA 115
V S+N +L Y++ A +LF + + PD V++ ++S + G +
Sbjct: 274 PERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRG 333
Query: 116 LSLFKDMREKRFDTDGF 132
L +F +M ++ DGF
Sbjct: 334 LEIFYEMVNQK---DGF 347
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 362/658 (55%), Gaps = 78/658 (11%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCG 110
H + A V+S L+AA R + R++ P + N L+ YA CG
Sbjct: 79 HRTDHRPSARVYS--TLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCG 136
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
A LF +M + +LC N++
Sbjct: 137 SLVDAQMLFDEMGHR------------------DLCSW-------------------NTM 159
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL- 229
+ Y++ G L++A+++F EM + +D SWN+ + Y H + EAL+LF+ M +
Sbjct: 160 IVGYAKLGRLEQARKLFDEMPQ-RDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSS 218
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ +TL+S L A ++ L G + H +LI++ + + + S L+DLY KC G + + +
Sbjct: 219 NKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKC-GSLDEARGI 277
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LS 348
F+++ D+V W TMI + + ++ F+ L + G P++ +F V++AC++ +
Sbjct: 278 FDQMKDRDVVSWTTMIHRCFE-DGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
LGK++H + +++ ALV MYSKCGN ARR+F+ M + + VS S+I
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAIS-ALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GYAQ+G EAL FE +L++ P +T+V VLSAC H G V +G +YF +K+ G
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 455
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANH 511
+HY+C+IDLL R+G+ +AE +I+ MP P +A +AA
Sbjct: 456 HTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKA 515
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
++EP N Y+ LANIYA +G W EVA +R+ M + G+ KKPG SWIE+K+Q+HVF+
Sbjct: 516 LYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLV 575
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
D SHP +IH +L E+S+K+K+ GYVPD KE+ LV+HSEKLAV FG+
Sbjct: 576 GDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGI 635
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ST G PI V KNLR C DCH AIK+IS I R+ITVRD+ RFHCF+DG CSC DYW
Sbjct: 636 ISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 239/475 (50%), Gaps = 24/475 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ ++ CV R L G+ +HA N VP ++SN + +Y+KCG L A F++
Sbjct: 89 VYSTLIAACVRHRALELGRRVHAHTKASNFVP-GVFISNRLLDMYAKCGSLVDAQMLFDE 147
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
H ++ S+N ++ YA+ R+ AR+LFD++PQ D S+N IS Y AL LF
Sbjct: 148 MGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELF 207
Query: 120 KDM-REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ M R +R ++ FTLS + AS+ CL K++H I + V ++LL Y +
Sbjct: 208 RVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGK 267
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G LDEA+ +F +M + +D VSW +M+ + E LF++++ + + YT A
Sbjct: 268 CGSLDEARGIFDQMKD-RDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAG 326
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A G + H +++ +G+ S S L+ +Y+KC G+ R +VF E+ QP
Sbjct: 327 VLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKC-GNTRVARRVFNEMHQP 385
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
DLV W ++I GY+Q + D+AL F+ L + G PD ++V V+SAC++ G
Sbjct: 386 DLVSWTSLIVGYAQNGQ-PDEALHFFELLLQSGTKPDQVTYVGVLSACTH----AGLVDK 440
Query: 357 ALTIKIEIRSNRISVNNA-----LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGY 410
L I+ ++ A ++ + ++ G ++A + D MP + + S++ G
Sbjct: 441 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGC 500
Query: 411 AQHGIGMEALR----LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
HG A R L+E +E P T IT ++ + +VA +K M
Sbjct: 501 RIHGNLELAKRAAKALYE--IEPENPATYITLANIYANAGLWSEVANVRKDMDNM 553
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 356/662 (53%), Gaps = 68/662 (10%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
++ A LF I P+ V +N +I + AL + M + + +T + +
Sbjct: 78 LSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKS 137
Query: 141 SSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG-------------------- 178
+ KQ+H + G +H A V+ SL+ Y++NG
Sbjct: 138 CTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSF 197
Query: 179 -----------FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
FLDEA+ +F E+ ++D VSWN+M+ Y Q EA+ F+EM ++
Sbjct: 198 TALITGYASKGFLDEARELFDEI-PVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKV 256
Query: 228 GLDMYTLASILTAFT-SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
++ T+ S+L+A S L G + + G N + +GLID+Y KC GD+ +
Sbjct: 257 TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC-GDLEEA 315
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+FE+I ++V WN MI GY+ Y +ALG F+++ + P+D +F+ ++ AC+N
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYK-EALGLFRRMMQSNIDPNDVTFLSILPACAN 374
Query: 347 LSP-SLGKQIHALTIK-IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L LGK +HA K ++ N +++ +L+ MY+KCG+L A+R+FD M + + N
Sbjct: 375 LGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWN 434
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI+G+A HG AL LF M P +ITFV VL+AC H G ++ G++YFS M
Sbjct: 435 AMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQD 494
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALK 507
+ P+ HY CMIDL GRAG +AE L++ M P G+I A
Sbjct: 495 YKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAES 554
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
A H +LEP N YV+L+NIYA +G+WE+VA IR + D ++K PG S IEV +H
Sbjct: 555 VAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVH 614
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
F+ D HP EI+ L+E+ ++++AG+VPD KE L HHSEKLA+
Sbjct: 615 EFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAI 674
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AFGL+ST G I +MKNLR+CG+CH+A K IS I REI RD RFH FKDG CSC D
Sbjct: 675 AFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKD 734
Query: 676 YW 677
YW
Sbjct: 735 YW 736
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 192/397 (48%), Gaps = 40/397 (10%)
Query: 144 NLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L +KQ+H I G H+A S +G L A +F + + V WN
Sbjct: 40 TLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN-PNHVIWNH 98
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ AL+ + M+S + YT SI + T + G Q HAH++K G
Sbjct: 99 MIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLG 158
Query: 262 FHQNSHIGSGLIDLYAKC-----------SGDMRDCM-------------------KVFE 291
N+ + + LI++YA+ MRD + ++F+
Sbjct: 159 LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFD 218
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSP 349
EIP D+V WN MISGY+Q ++A+ F+++ R P+ + + V+SAC S S
Sbjct: 219 EIPVRDVVSWNAMISGYAQSGRV-EEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSL 277
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG + + + SN I + N L+ MY KCG+LE+A LF+++ + N VS N MI G
Sbjct: 278 QLGNWVRSWIEDRGLGSN-IRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGG 336
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM-KDMFGFE 468
Y EAL LF M+++NI P ++TF+S+L ACA+ G + G+ + + K+M +
Sbjct: 337 YTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMK 396
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA 505
++ +ID+ + G L A+R+ + M N S+A
Sbjct: 397 NTVALWTSLIDMYAKCGDLAVAKRIFDCM--NTKSLA 431
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 35/293 (11%)
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQP 296
LT ++ + L Q H+ +IK+G H S LI+ A GD+ + +F+ I P
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQI 355
+ V+WN MI G S E AL + + G P++ +F + +C+ + + GKQ+
Sbjct: 92 NHVIWNHMIRGLSSSES-PFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGN------------------------------- 384
HA +K+ + N V+ +L+ MY++ G
Sbjct: 151 HAHVLKLGLEHNAF-VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGF 209
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L++AR LFD +P + VS N+MI+GYAQ G EA+ FE M + P T +SVLSA
Sbjct: 210 LDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSA 269
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
CA +G + + + G + +ID+ + G L +A L E +
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI 322
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/708 (37%), Positives = 387/708 (54%), Gaps = 70/708 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L++C DL G+ LHA L L S +L+NH I +YS C L
Sbjct: 26 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADL------------- 72
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
ASA +LF +P+ + VS+ TL+S + AL+ F MR
Sbjct: 73 ------------------ASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 114
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F LS A++ + QLHC+ + GFD V ++L YS+ G L
Sbjct: 115 RAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLS 174
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASILTA 240
EA RVF +M + KD V+W +M+ Y ++ A+ F++M L G D + S+L+A
Sbjct: 175 EACRVFDQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA 233
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLV 299
L+D H + K+GF + + LID+YAK S D+ +V + P ++V
Sbjct: 234 SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK-SMDVESASRVLKIDPGGWNVV 292
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+MI GY + + ++AL + +L R G P++ +F +I C+ + G Q+HA
Sbjct: 293 SGTSMIDGYIETD-CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 351
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK ++ + V + LV MY KCG + + +LF+ + ++ N++I +AQHG G E
Sbjct: 352 VIKTDLIRDSF-VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGRE 410
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A++ F+ M+ + I P +I FVS+L+AC+H G V EG KYF MK+ G EP+ EHYSC+I
Sbjct: 411 AIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCII 470
Query: 479 DLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSNAV 521
D GRAG+L +A + I MP P GS L AA + ++LEP N
Sbjct: 471 DTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTG 530
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V L+ IYA+ G+WE+V +R+LMRD ++K PGFSW++ K+ HVF +ED SHP K+
Sbjct: 531 IHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKD 590
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ LEE++ ++K+ GY+PD KE+ L +HSE++AVAF L+S +PI+
Sbjct: 591 IYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPII 650
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLRIC DCH A KFI + R+I VRD RFH F +GRCSCGDYW
Sbjct: 651 VKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 11/270 (4%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEE 292
LAS+L + DL G HA L+ SG S + + LI +Y+ C+ D+ +++F
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCA-DLASALRLFAA 81
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD-CSFVCVISACSNLSPSL 351
+P+ + V W T++SG SQ ++D F + R G P +A + +P
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAA-FAAMRRAGVAPTRFALSSAARAAAALGAPLP 140
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G Q+H + +++ + +N L MYSKCG L +A R+FD+MP+ + V+ +MI GYA
Sbjct: 141 GAQLHCVGVRLGFDTELFVASN-LADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYA 199
Query: 412 QHGIGMEALRLFEWM-LETNIPPTNITFVSVLSACAHTGKVAEG--QKYFSMMKDMFGFE 468
++G A+ F M E + F SVLSA +G + +G K GFE
Sbjct: 200 KNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFE 256
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
E + +ID+ ++ + A R+++ P
Sbjct: 257 LEVAVRNALIDMYAKSMDVESASRVLKIDP 286
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 40/254 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C + L G LHA +K + +++ + + +Y KCG +S + FN+
Sbjct: 328 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 387
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ ++N ++ +A+ A Q FD++ +P+ +++ +L++A + G + L
Sbjct: 388 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 447
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+E I +HY+ + ++ Y R
Sbjct: 448 KYFYSMKEAH----------------------------GIEPKEEHYSCIIDT----YGR 475
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G LDEA + EM + W S++ A G G A Q ++ G+ + +
Sbjct: 476 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHV-S 534
Query: 234 LASILTAFTSLEDL 247
L+ I + ED+
Sbjct: 535 LSGIYASLGQWEDV 548
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/710 (34%), Positives = 390/710 (54%), Gaps = 73/710 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ Q++ CV ++ K L + +L P ++L N + LY+K G L A + F++
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ FS+N LL+AYA+ I + + FD++P D VSYNT I+ ++ + +L LFK
Sbjct: 85 LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + F+ +T+ ++ AS+ L L KQ+H I F + N+L Y++ G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ +F + + K+ VSWN M+ Y ++ + + + L +M D T+++I+
Sbjct: 205 EIEQARWLFDCLTK-KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A Y +C G + + +VF E + D+
Sbjct: 264 AA-----------------------------------YCQC-GRVDEARRVFSEFKEKDI 287
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V W M+ GY++ D AL F ++ PD + V+S+C+ L S G+ +H
Sbjct: 288 VCWTAMMVGYAKNGREED-ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHG 346
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+I + +N + V++AL+ MYSKCG ++DAR +F+ MP N VS N+MI G AQ+G
Sbjct: 347 KSILAGLNNNLL-VSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDK 405
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL LFE ML+ P N+TF+ +LSAC H + +GQ+YF + + G P +HY+CM
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACM 465
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSI--ALKAANHFLQLEPSNA 520
++LLGR G++ A LI+ M +P G I A AA H +L+P+ A
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
VPY+ML+N+YA+ G+W++VA++R LM+ + V+K GFSWIE+ ++H F +ED +HP +
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG-EP 627
+I+ L + K+++ G+ P +K K + HSEKLA+AFGL+ G P
Sbjct: 586 DIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISP 645
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KN+RIC DCH +KF S I GR+I +RD+ RFH F G+CSC D W
Sbjct: 646 IRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 169/357 (47%), Gaps = 55/357 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLH-ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T +L DL GK +H ++ ++N + + ++ N +Y+KCG + A F+
Sbjct: 157 TIVSILNASAQLLDLRYGKQIHGSIIVRNFLG-NVFIWNALTDMYAKCGEIEQARWLFDC 215
Query: 60 TQHANVFSFNVLLAAYAR------------QLRIA-----------------------SA 84
N+ S+N++++ YA+ Q+R++ A
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEA 275
Query: 85 RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN 144
R++F + + D+V + ++ YA G E AL LF +M + + D +TLS ++++ +
Sbjct: 276 RRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKL 335
Query: 145 LCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
L + +H +I G ++ V+++L+ YS+ GF+D+A+ VF M ++ VSWN+M
Sbjct: 336 ASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM-PTRNVVSWNAM 394
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+V Q+ +AL+LF+ M+ + D T IL+A + G ++ +
Sbjct: 395 IVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSI----- 449
Query: 263 HQNSHIGSGLIDLYAKC-------SGDMRDCMKVFEEIPQ-PDLVLWNTMISGYSQK 311
N H + +D YA C +G + + + + + PD ++W+T++S S K
Sbjct: 450 -SNQHGMTPTLDHYA-CMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTK 504
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/548 (40%), Positives = 323/548 (58%), Gaps = 35/548 (6%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
F H +NN+LL Y++ G L+EA++VF +M E +D V+W +++ Y QH +AL LF
Sbjct: 82 FRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPE-RDFVTWTTLISGYSQHDRPFDALVLF 140
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M+ + +TL+S++ A + G Q H +K GF N H+GS L+DLY +
Sbjct: 141 NQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR- 199
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G M D VF+ + + V WN +I+G++++ +++AL F+ + R G+ P S+
Sbjct: 200 YGLMDDAQLVFDALESRNDVSWNALIAGHARRCG-TEKALELFQGMLREGFRPSHFSYAS 258
Query: 340 VISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+ ACS+ GK +HA IK + + N L+ MY+K G++ DAR++FDR+ +
Sbjct: 259 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GNTLLDMYAKSGSIHDARKIFDRLAKR 317
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS NS++ YAQHG G EA+ FE M I P I+F+SVL+AC+H+G + EG Y+
Sbjct: 318 DVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYY 377
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---------- 508
+MK G E HY ++DLLGRAG L A R IE MP P + KA
Sbjct: 378 ELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 436
Query: 509 -------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
A H +L+P + P+V+L NIYA+ G+W + A +R+ M++ GV+K+P SW+E
Sbjct: 437 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 496
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------H 609
++ +H+FVA D HP +EI EE+ K+K+ GYVPD +VH H
Sbjct: 497 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYH 556
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEK+A+AF LL+T G I + KN+R+CGDCH+AIK S GREI VRDT RFH FKDG
Sbjct: 557 SEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDG 616
Query: 670 RCSCGDYW 677
CSC DYW
Sbjct: 617 ACSCKDYW 624
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 150/267 (56%), Gaps = 13/267 (4%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L T + L G H HLI+S F + + + L+++YAKC G + + KVF+++P+
Sbjct: 56 TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKC-GSLEEARKVFDKMPE 114
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLGKQ 354
D V W T+ISGYSQ + D AL F ++ R G+ P++ + VI +A + G Q
Sbjct: 115 RDFVTWTTLISGYSQHDRPFD-ALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K SN + V +AL+ +Y++ G ++DA+ +FD + N VS N++IAG+A+
Sbjct: 174 LHGFCVKCGFDSN-VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRC 232
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM----KDMFGFEPE 470
+AL LF+ ML P++ ++ S+ AC+ TG + +G+ + M + + F
Sbjct: 233 GTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG- 291
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ ++G + DA ++ + +
Sbjct: 292 ----NTLLDMYAKSGSIHDARKIFDRL 314
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 158/345 (45%), Gaps = 28/345 (8%)
Query: 13 RDLVTGKSLHALYLKNLVPFSA-----------YLSNHFIL-------LYSKCGCLSAAH 54
RD VT +L + Y ++ PF A + N F L + GC
Sbjct: 115 RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQL 174
Query: 55 HAF--NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
H F +NV + LL Y R + A+ +FD + + VS+N LI+ +A T
Sbjct: 175 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGT 234
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
E AL LF+ M + F F+ + L A S+ L K +H I G A N+L
Sbjct: 235 EKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 294
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y+++G + +A+++F + + +D VSWNS++ AY QH G EA+ F+EM + +
Sbjct: 295 LDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ S+LTA + L G ++ + K G + ++DL + +GD+ ++
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGR-AGDLNRALRFI 412
Query: 291 EEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
EE+P +P +W +++ + + LG + + PDD
Sbjct: 413 EEMPIEPTAAIWKALLNACRM---HKNTELGAYAAEHVFELDPDD 454
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/671 (35%), Positives = 372/671 (55%), Gaps = 68/671 (10%)
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTD 130
+AA + + AR++FD+IP+P+ ++NTLI AYA D ++ F DM E + +
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T LI A++ ++L L + LH +A+ V NSL+ CY G LD A +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E KD VSWNSM+ + Q +AL+LF++M S + T+ +L+A + +L
Sbjct: 191 TIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q +++ ++ + N + + ++D+Y KC G + D ++F+ + + D V W TM+ GY
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKC-GSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 309 SQKEEYS------------------------------DQALGCFKKLN-RVGYHPDDCSF 337
+ E+Y ++AL F +L + + +
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 338 VCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
V +SAC+ + LG+ IH+ K IR N V +AL+ MYSKCG+LE +R +F+ +
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + ++MI G A HG G EA+ +F M E N+ P +TF +V AC+HTG V E +
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
F M+ +G PE +HY+C++D+LGR+G L A + IEAMP P +
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 504 ----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+A A L+LEP N +V+L+NIYA GKWE V+ +R+ MR G++K+PG S
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRL 606
IE+ +H F++ D +HPM ++++ L E+ K+K GY P+ KE+ L
Sbjct: 608 IEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSL 667
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
HSEKLA+ +GL+ST + I V+KNLR+CGDCH+ K IS + REI VRD YRFH F
Sbjct: 668 NLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHF 727
Query: 667 KDGRCSCGDYW 677
++G+CSC D+W
Sbjct: 728 RNGQCSCNDFW 738
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 342/561 (60%), Gaps = 36/561 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H I ++ + L+ Y++ L +A+RV EM E ++ VSW +M+ Y Q
Sbjct: 497 QRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-RNVVSWTAMISGYSQ 555
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
EAL LF EM+ + +T A++LT+ TS G Q H+ +IK+ F + +
Sbjct: 556 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 615
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+YAK +G + + +VF+ +P+ D+V +ISGY+Q ++AL F++L R
Sbjct: 616 GSSLLDMYAK-AGKICEARRVFDGLPERDVVSCTAIISGYAQLG-LDEEALDLFRRLQRE 673
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + ++ V++A S L+ G+Q+H+ ++ ++ + + N+L+ MYSKCG+L
Sbjct: 674 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL-PFYVVLQNSLIDMYSKCGSLTY 732
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACA 446
+RR+FD MPE +S N+M+ GY++HG+G EA+ LF+ M E N + P ++TF++VLS C+
Sbjct: 733 SRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 792
Query: 447 HTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-- 503
H G G + ++ M+ GFEPE EHY C++DL GRAG++ +A I+ MPF P +
Sbjct: 793 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 852
Query: 504 ---------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
I A L++E NA YV+L+N+YA++G+W++V T+R LM++
Sbjct: 853 WGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKE 912
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
+ V K+PG SWIE+ + +H F A D SHP +E+ + E+S K+K+AGYVP+
Sbjct: 913 KAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYD 972
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KEK L HSEKLA+AFGL+ T G P+ ++KNLRIC DCHN KF+S + GRE++
Sbjct: 973 VDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVS 1032
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
+RD RFH G CSCGDYW
Sbjct: 1033 LRDKNRFHHIVGGTCSCGDYW 1053
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 21/305 (6%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA---------NVFSF 68
G + AL+L + S N F C S++ + H+ ++F
Sbjct: 557 GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG 616
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ LL YA+ +I AR++FD +P+ D+VS +IS YA G E AL LF+ ++ +
Sbjct: 617 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 676
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
++ T + ++TA S L +Q+H + Y + NSL+ YS+ G L ++R+
Sbjct: 677 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 736
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFT--S 243
F M E + +SWN+M+V Y +H G EA++LF+ M ++ D T ++L+ +
Sbjct: 737 FDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 795
Query: 244 LEDLVGGLQFHAHLI--KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ED GL+ ++ K GF ++DL+ + +G + + + +++P +P +
Sbjct: 796 MEDR--GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR-AGRVEEAFEFIKKMPFEPTAAI 852
Query: 301 WNTMI 305
W +++
Sbjct: 853 WGSLL 857
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL G L G+ +H+ L+ +PF L N I +YSKCG L+ + F+
Sbjct: 681 TYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSM 740
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-----PDLVSYNTLISAYADCGDTESA 115
V S+N +L Y++ A +LF + + PD V++ ++S + G +
Sbjct: 741 PERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRG 800
Query: 116 LSLFKDMREKRFDTDGF 132
L +F +M ++ DGF
Sbjct: 801 LEIFYEMVNQK---DGF 814
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/650 (37%), Positives = 360/650 (55%), Gaps = 38/650 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H +VF N L+ Y+ +A AR LFD+I D+VS++T+I +Y G + AL L +D
Sbjct: 156 HGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRD 215
Query: 122 MREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVN--NSLLTCYSRN 177
M R + + + A +L L K +H + G + V +L+ Y +
Sbjct: 216 MHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKC 275
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
L A+RVF + + +SW +M+ AY E ++LF +M+ + + T+ S+
Sbjct: 276 ENLAYARRVFDGLSK-ASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ + L G HA +++GF + + + ID+Y KC GD+R VF+ D
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKC-GDVRSARSVFDSFKSKD 393
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIH 356
L++W+ MIS Y+Q D+A F + G P++ + V ++ C+ S +GK IH
Sbjct: 394 LMMWSAMISSYAQNNCI-DEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIH 452
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ K I+ + I + + V MY+ CG+++ A RLF + + N+MI+G+A HG G
Sbjct: 453 SYIDKQGIKGDMI-LKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHG 511
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
AL LFE M + P +ITF+ L AC+H+G + EG++ F M FGF P+ EHY C
Sbjct: 512 EAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGC 571
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
M+DLLGRAG L +A LI++MP P + AA FL LEP
Sbjct: 572 MVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHK 631
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ V+++NIYA++ +W +VA IRR M+D G+ K+PG S IEV +H F+ D HP
Sbjct: 632 SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDA 691
Query: 580 KEIHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGEP 627
K+++ ++EM K++ AGY P DKEK+ L +HSEKLA+A+GL+ST+ G P
Sbjct: 692 KKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVP 751
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLR+C DCHNA K +S I GREI VRD RFH FK+G CSC DYW
Sbjct: 752 IRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 144/297 (48%), Gaps = 5/297 (1%)
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ +Y ++ +A +++ M +D + + S+L A + + G + H ++K+G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
FH + + + LI +Y++ G + +F++I D+V W+TMI Y + D+AL
Sbjct: 155 FHGDVFVCNALIMMYSEV-GSLALARLLFDKIENKDVVSWSTMIRSY-DRSGLLDEALDL 212
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI-EIRSNRISVNNALVAMY 379
+ ++ + P + + + + L+ LGK +HA ++ + + + + AL+ MY
Sbjct: 213 LRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMY 272
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
KC NL ARR+FD + + + +S +MIA Y E +RLF ML + P IT +
Sbjct: 273 VKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITML 332
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
S++ C G + G K GF + ID+ G+ G + A + ++
Sbjct: 333 SLVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDS 388
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++K C L GK LHA L+N S L+ FI +Y KCG + +A F
Sbjct: 330 TMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVF--- 386
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
D DL+ ++ +IS+YA + A +F
Sbjct: 387 ----------------------------DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFV 418
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + T+ L I A + +L + K +H G + S + Y+ G
Sbjct: 419 HMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCG 478
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A R+F E + +D WN+M+ + H G AL+LF+EM +L + + T L
Sbjct: 479 DIDTAHRLFAEATD-RDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGAL 537
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + L G + FH + + GF ++DL + +G + + ++ + +P +P
Sbjct: 538 HACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGR-AGLLDEAHELIKSMPMRP 596
Query: 297 DLVLWNTMISG 307
++ ++ + ++
Sbjct: 597 NIAVFGSFLAA 607
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/712 (35%), Positives = 388/712 (54%), Gaps = 74/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL C + L GK++H+ + + L N + +Y+KCG L
Sbjct: 123 VYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLE-------- 174
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
A++LF+++ + S+N +I+AYA G E A+ L+
Sbjct: 175 -----------------------DAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSR 176
+DM + T + +++A SN L L+ Q +H L G + S+ N+LLT Y+R
Sbjct: 212 EDMD---VEPSVRTFTSVLSACSN-LGLLDQGRKIHALISSRGTELDLSLQNALLTMYAR 267
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
LD+A ++F + +D VSW++M+ A+ + EA++ + +M + + YT AS
Sbjct: 268 CKCLDDAAKIFQRLPR-RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 326
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A S+ DL G H ++ +G+ G+ L+DLY G + + +F++I
Sbjct: 327 VLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSY-GSLDEARSLFDQIENR 385
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP-DDCSFVCVISACSNLSP-SLGKQ 354
D LW +I GYS K+ + L ++++ P + CVISAC++L + +Q
Sbjct: 386 DEGLWTVLIGGYS-KQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQ 444
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
H+ I+ + + + +LV MYS+ GNLE AR++FD+M +T++ ++IAGYA+HG
Sbjct: 445 AHS-DIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 503
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
AL L++ M P+ +TF+ VL AC+H G +G++ F ++ + P HY
Sbjct: 504 EHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHY 563
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP 517
SC+IDLL RAG+L+DAE LI AMP P + A AA +L+P
Sbjct: 564 SCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDP 623
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ YV+L+N++A +G +A++R M RGV+K+ G SWIEV Q+H F D SHP
Sbjct: 624 VDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHP 683
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP----------DKEKRLV--HHSEKLAVAFGLLSTSYG 625
+EI L+ +S K+K+AGYVP +KEK L+ HSEKLA+AFGL++T+ G
Sbjct: 684 RFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPG 743
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + LRIC DCH+A+KFISAIA REI VRD+ RFH F+DG+CSCGDYW
Sbjct: 744 TTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 242/469 (51%), Gaps = 19/469 (4%)
Query: 37 SNHFILLYSKCGCLSAA---HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ 93
S H+ +C L + H + ANVF N ++ AY + +ASAR FD I +
Sbjct: 27 SGHYRDALRQCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIAR 86
Query: 94 PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHC 153
+ S+ ++++AYA G +AL L+K M + T+ G AS L K +H
Sbjct: 87 KNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLG-ACASIKALEEGKAIHS 145
Query: 154 -LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
++ G + NSLLT Y++ G L++AKR+F M + SWN+M+ AY Q
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSG-RSVSSWNAMIAAYAQSGHF 204
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EA++L+++M + + T S+L+A ++L L G + HA + G + + + L
Sbjct: 205 EEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNAL 261
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+ +YA+C + D K+F+ +P+ D+V W+ MI+ +++ + + D+A+ + K+ G P
Sbjct: 262 LTMYARCKC-LDDAAKIFQRLPRRDVVSWSAMIAAFAETDLF-DEAIEFYSKMQLEGVRP 319
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDAR 389
+ +F V+ AC+++ G+ +H +I +I++ N ALV +Y+ G+L++AR
Sbjct: 320 NYYTFASVLLACASVGDLRAGRAVHD---QILGNGYKITLVNGTALVDLYTSYGSLDEAR 376
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHT 448
LFD++ + +I GY++ G L L+ M T +P T I + V+SACA
Sbjct: 377 SLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASL 436
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G A+ ++ S + + G + + ++++ R G L A ++ + M
Sbjct: 437 GAFADARQAHSDI-EADGMISDFVLATSLVNMYSRWGNLESARQVFDKM 484
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 137/260 (52%), Gaps = 11/260 (4%)
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A +DL Q H I N +G+ ++ Y KC G + F+ I + +
Sbjct: 33 ALRQCQDLESVRQIHDR-ISGAASANVFLGNEIVRAYGKC-GSVASARAAFDAIARKNDY 90
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W +M++ Y+Q Y AL +K+++ P+ + V+ AC+++ GK IH+
Sbjct: 91 SWGSMLTAYAQNGHYR-AALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSR 146
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ + + N+L+ MY+KCG+LEDA+RLF+RM + S N+MIA YAQ G E
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEE 206
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A+RL+E M ++ P+ TF SVLSAC++ G + +G+K +++ G E + + ++
Sbjct: 207 AIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSR-GTELDLSLQNALL 262
Query: 479 DLLGRAGKLTDAERLIEAMP 498
+ R L DA ++ + +P
Sbjct: 263 TMYARCKCLDDAAKIFQRLP 282
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/645 (37%), Positives = 364/645 (56%), Gaps = 41/645 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ I A +F + D V++N++I+ A+ F++MR
Sbjct: 428 NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELY 487
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT+ ++ AS + + +QLHC + G D SV+N+LL Y G++ E ++
Sbjct: 488 PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKA 547
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREG-LEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M + D VSWNS++ A LEA++ F M+ + T +IL A +SL
Sbjct: 548 FSLMLDY-DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLS 606
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
G Q HA ++K ++ I + L+ Y KC GDM C +F + + D V WN+M
Sbjct: 607 LHELGKQIHALVLKRNVAADTAIENALLACYGKC-GDMGYCENIFSRMSDRQDEVSWNSM 665
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY E +A+ + + G D +F V+SAC+ ++ G ++H +++
Sbjct: 666 ISGYIHNELLP-KAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRAC 724
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ I + +ALV MY+KCG ++ A R F+ MP N S NSMI+GYA+HG G ++L LF
Sbjct: 725 LESD-IVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLF 783
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M P ++TFV VLSAC+H G V EG +F M +++G P EH+SCM+DLLGR
Sbjct: 784 AQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGR 843
Query: 484 AGKLTDAERLIEAMPFNPG-------------------SIALKAANHFLQLEPSNAVPYV 524
G+L E + MP P ++ +AA L++EP+NAV Y+
Sbjct: 844 VGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYI 903
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N+YA+ GKW++VA R MR V+K+ G SW+ +K +HVFVA D SHP I+
Sbjct: 904 LLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYE 963
Query: 585 YLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
L+E++ KM+ AGY+P+ KE+ L +HSEK+AVAF +L+ PI ++K
Sbjct: 964 KLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILK 1022
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCH+A K+IS I R+I +RD+ RFH F++G+CSCGD+W
Sbjct: 1023 NLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 212/410 (51%), Gaps = 22/410 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F N L+ YAR + S R++FD++P +LVS++ LIS Y A LF+ M
Sbjct: 107 DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMV 166
Query: 124 EKRFDTDGFTLSGLITASSN----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN-G 178
F + + +I A L Q+H L + + + +N L++ Y G
Sbjct: 167 SDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALG 226
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM----YTL 234
+D A+R F + ++ VS NSM+ Y Q + + A +F M +G + YT
Sbjct: 227 MVDYARRAFDSIWP-RNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTF 285
Query: 235 ASILTAFTSLED--LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
S+++A SL + LV Q + KSGF + ++GS L+ +AK +G + +F++
Sbjct: 286 GSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAK-AGSIGYAKNIFQK 344
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNL---- 347
+ ++V N +I G +++ ++A+ F ++ + V +P+ S++ +++A
Sbjct: 345 MSYRNVVSLNGLIIGLVRQKR-GEEAVELFMEMKDSVELNPN--SYMIILTAFPEFHVLE 401
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G ++HA I+ + + +I++ N L+ MY+KCG + DA +F M ++V+ NSM
Sbjct: 402 NGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSM 461
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
I G Q+ +EA++ F+ M T + P+N T +S LS+CA G ++ G++
Sbjct: 462 ITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ 511
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/535 (25%), Positives = 251/535 (46%), Gaps = 98/535 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ Q + G +D + LH KN +L N I +Y++ G L + F++
Sbjct: 78 SLAQRYRYSCGSKD---AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEM 134
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGD--TES 114
N+ S++ L++ Y R A +LF ++ P+ ++ ++I A +CG+ +
Sbjct: 135 PLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKF 194
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLH----------------CLAIYC 158
+ + M + ++ D + LI+ N L ++ +++YC
Sbjct: 195 GMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYC 254
Query: 159 -------GFDHYA--------------------------SVNNS-------LLTCYSRNG 178
FD ++ S+ NS LLT ++G
Sbjct: 255 QRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSG 314
Query: 179 FLDE-------------------AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
FL + AK +F +M ++ VS N +++ + + G EA++LF
Sbjct: 315 FLHDLYVGSALVSGFAKAGSIGYAKNIFQKM-SYRNVVSLNGLIIGLVRQKRGEEAVELF 373
Query: 220 QEMV-SLQLGLDMYTLASILTAFTSLEDLVGGL----QFHAHLIKSG-FHQNSHIGSGLI 273
EM S++L + Y + ILTAF L G + HA LI+SG + IG+GLI
Sbjct: 374 MEMKDSVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLI 431
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
++YAKC G + D VF + D V WN+MI+G Q +++ +A+ F+++ R +P
Sbjct: 432 NMYAKC-GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFL-EAVKTFQEMRRTELYPS 489
Query: 334 DCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ + + +S+C++L S+G+Q+H +K+ + + +SV+NAL+A+Y +CG +++ ++ F
Sbjct: 490 NFTMISALSSCASLGWISVGEQLHCEGLKLGLDLD-VSVSNALLALYGECGYVKECQKAF 548
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGM-EALRLFEWMLETNIPPTNITFVSVLSACA 446
M +++ VS NS+I A M EA+ F M+ P +TF+++L+A +
Sbjct: 549 SLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVS 603
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 16/259 (6%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
+ H L K+GF + + + LI++YA+ GD+ KVF+E+P +LV W+ +ISGY+ +
Sbjct: 94 ELHLQLFKNGFVNDLFLCNTLINIYARV-GDLGSGRKVFDEMPLRNLVSWSCLISGYT-R 151
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP---SLGKQIHALTIKIEIRSNR 368
++A F+K+ G+ P+ +F VI AC G QIH L K + N
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQY-VND 210
Query: 369 ISVNNALVAMYSKC-GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM- 426
++ +N L++MY G ++ ARR FD + N VSLNSMI+ Y Q G + A +F M
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270
Query: 427 ---LETNIPPTNITFVSVLSAC---AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+ + P TF S++SA A++G V Q + K GF + S ++
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKS--GFLHDLYVGSALVSG 328
Query: 481 LGRAGKLTDAERLIEAMPF 499
+AG + A+ + + M +
Sbjct: 329 FAKAGSIGYAKNIFQKMSY 347
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 139/319 (43%), Gaps = 61/319 (19%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
GK +HAL LK V + N + Y KCG + + F++
Sbjct: 611 GKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRM----------------- 653
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
S RQ D VS+N++IS Y A+ + M +K DGFT + +
Sbjct: 654 -----SDRQ--------DEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATV 700
Query: 138 ITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
++A + L + ++H ++ + + ++L+ Y++ G +D A R F+EM ++
Sbjct: 701 LSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASR-FFEMMPARN 759
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFH 254
SWNSM+ Y +H G ++L LF +M LQ L D T +L+A + H
Sbjct: 760 LYSWNSMISGYARHGHGTKSLDLFAQM-KLQGPLPDHVTFVGVLSACS-----------H 807
Query: 255 AHLIKSGFHQNSHIG------------SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLW 301
A L+ GF + S ++DL + G++ ++P +P++++W
Sbjct: 808 AGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRV-GELNKMEDFLNQMPVKPNVLIW 866
Query: 302 NTMISGYSQKEEYSDQALG 320
T++ G + + ALG
Sbjct: 867 RTVL-GACCRANGRNTALG 884
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G +H ++ + + + + +Y+KCG + A F
Sbjct: 696 TFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMM 755
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
N++S+N +++ YAR + LF Q+ P PD V++ ++SA + G
Sbjct: 756 PARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGF 815
Query: 117 SLFKDMRE 124
S F M E
Sbjct: 816 SHFDSMSE 823
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/617 (39%), Positives = 347/617 (56%), Gaps = 55/617 (8%)
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL 154
D+VS N I+++ D ESA ++F+ M + T LSG + +K+ H L
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGK----VKEAHEL 127
Query: 155 AIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
FD + N +L CY R+ + EA F+ +KD SWN+++ + Q+
Sbjct: 128 -----FDKIPEPDSVSYNIMLVCYLRS-YGVEAALAFFNKMPVKDIASWNTLISGFAQNG 181
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+ +A LF M + + +++++ + G L+ L K+ ++ + +
Sbjct: 182 QMQKAFDLFSVMPEK----NGVSWSAMISGYVEH----GDLEAAEELYKNVGMKSVVVET 233
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
++ Y K G + ++F+ + +LV WN+MI+GY + D L FK +
Sbjct: 234 AMLTGYMKF-GKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAED-GLKVFKTMIESRV 291
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ S V+ CSNLS LG+Q+H L K + S + +L++MY KCG+L+ A
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPL-SKDTTACTSLISMYCKCGDLDSAW 350
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+LF MP + +S N+MI+GYAQHG G +AL LF+ M + P ITFV+V+ AC H G
Sbjct: 351 KLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------ 503
V G +YF MK FG E + HY+C+IDLLGRAG+L +A LI+ MPF P +
Sbjct: 411 FVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTL 470
Query: 504 -----------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+A AA + L L+P++A YV LANIYAA+ KW++VA +R++M++ V
Sbjct: 471 LGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVV 530
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K PG+SWIE+K H F + D HP + IH L E+ KMK AGYVPD
Sbjct: 531 KIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEE 590
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
KEK L+ HSEKLA+AFGL+ T+ G PI V KNLR+CGDCH AIKFISAI REI VRDT
Sbjct: 591 HKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDT 650
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH F++G CSCGDYW
Sbjct: 651 TRFHHFRNGFCSCGDYW 667
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 214/426 (50%), Gaps = 19/426 (4%)
Query: 44 YSK-CGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
Y+K G + AH F++ + S+N++L Y R + +A F+++P D+ S+NTL
Sbjct: 114 YTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTL 173
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGF 160
IS +A G + A LF M EK +G + S +I+ +L ++L+ G
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYK---NVGM 226
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
V ++LT Y + G ++ A+R+F M +K+ V+WNSM+ Y ++ + L++F+
Sbjct: 227 KSVV-VETAMLTGYMKFGKVELAERIFQRMA-VKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
M+ ++ + +L+S+L ++L L G Q H + KS +++ + LI +Y KC
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC- 343
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
GD+ K+F E+P+ D++ WN MISGY+Q +AL F K+ PD +FV V
Sbjct: 344 GDLDSAWKLFLEMPRKDVISWNAMISGYAQHGA-GRKALHLFDKMRNGTMKPDWITFVAV 402
Query: 341 ISACSNLS-PSLGKQ-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
I AC++ LG Q ++ + I + + ++ + + G L++A L MP
Sbjct: 403 ILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHY-TCVIDLLGRAGRLDEAVSLIKEMPFK 461
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT-FVSVLSACAHTGKVAEGQKY 457
++ + G + ++ L F N+ PT+ T +V + + A T K + K
Sbjct: 462 PHAAIYGTLLGACRIHKNLD-LAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKV 520
Query: 458 FSMMKD 463
MMK+
Sbjct: 521 RKMMKE 526
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C L G+ +H L K+ + I +Y KCG L +A F +
Sbjct: 297 SLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM 356
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N +++ YA+ A LFD++ +PD +++ +I A G + +
Sbjct: 357 PRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGV 416
Query: 117 SLFKDMREK 125
FK M+++
Sbjct: 417 QYFKSMKKE 425
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/541 (41%), Positives = 322/541 (59%), Gaps = 35/541 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N +++ Y + G ++A+ +F +M +D SW +++ QH EAL+L++ M
Sbjct: 188 NIMISGYVKGGNFEKARNLFDKMPN-RDNFSWTAIISGCVQHNRPEEALELYRLMQKHDY 246
Query: 228 GL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T++S L A ++ L G + H H+++ G + + L+D+Y KC G + +
Sbjct: 247 SKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKC-GSIEEA 305
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+F+++ + D+V W TMI Y K ++ F+ L P+D +F V++AC++
Sbjct: 306 RYIFDKMEERDVVSWTTMIHTY-LKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACAD 364
Query: 347 LSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ LGKQIHA +++ S S +ALV MYSKCG++E+A+ +F+ +P+ + S S
Sbjct: 365 LAAEDLGKQIHAYMVRVGFDSFS-SAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTS 423
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
++ GYAQHG +AL FE +L++ P I F+ VLSACAH G V +G +YF +K+
Sbjct: 424 LLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKH 483
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKA 508
G +HY+C+IDLL RAG+ T+AE +I MP P +A +A
Sbjct: 484 GLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRA 543
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A ++EP N YV LANIYA++G E A IR M RG+ KKPG SWIE+++++HV
Sbjct: 544 AKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHV 603
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F D SHP KEI YL E+S++MK+ GYVPD KE+ L +HSEKLAVA
Sbjct: 604 FSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVA 663
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FG++ST G PI V KNLR C DCHNAIKFIS I GR+I VRD+ RFHCF+ G CSC DY
Sbjct: 664 FGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDY 723
Query: 677 W 677
W
Sbjct: 724 W 724
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 40/209 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLS--NHFILLYSKCGCLSAAHHAFN 58
TF VL C GK +HA ++ V F ++ S + + +YSKCG + A F
Sbjct: 354 TFAGVLNACADLAAEDLGKQIHAYMVR--VGFDSFSSAASALVHMYSKCGDIENAKSVFE 411
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTES 114
++FS+ LL YA+ + A F+ + +PD +++ ++SA A G +
Sbjct: 412 ILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDK 471
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
L F ++EK G T + DHYA + + L
Sbjct: 472 GLEYFHSIKEKH----GLTRT------------------------IDHYACIIDLL---- 499
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+R G EA+ + EM D+ W +++
Sbjct: 500 ARAGQFTEAESIINEMPIKPDKYIWAALL 528
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/540 (41%), Positives = 321/540 (59%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y + G L+ A+++F EM E ++ +WN+M+ Q +AL LF+EM L
Sbjct: 132 NILINGYLQLGDLESAQKLFDEMSE-RNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGF 190
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D +TL S+L L L+ G + HA L+K GF +S +GS L +Y K SG + D
Sbjct: 191 LPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK-SGSLSDGE 249
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
K+ + +P +V WNT+I+G +Q ++ L + + G+ PD +FV V+SACS L
Sbjct: 250 KLIKSMPIRTVVAWNTLIAGKAQNG-CPEEVLNQYNMMKMAGFRPDKITFVSVLSACSEL 308
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ G+QIHA IK S+ ++V ++L++MYS+ G LED+ + F + V +SM
Sbjct: 309 ATLGQGQQIHAEVIKAGA-SSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSM 367
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IA Y HG G EAL LF M + + +TF+S+L AC+H+G +G +YF +M +
Sbjct: 368 IAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYK 427
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------A 509
+P EHY+C++DLLGRAG+L +AE +I +MP P I K +
Sbjct: 428 LKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERIS 487
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++L+P +A YV+L+NI+A++ W V+ IR+ MRDR V+K+PG SW+E+K +H F
Sbjct: 488 EEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQF 547
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
D SHP EI YL+E+ ++KQ GYVP +KE L HHSEK A+AF
Sbjct: 548 SMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAF 607
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L++TS PI VMKNLR+C DCHNAIK IS I REI VRD RFH FKDG CSCG+YW
Sbjct: 608 ALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 52/350 (14%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--------- 280
D + +L + L L GG Q H+ +I SG ++ I + L++ Y+K
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 281 ---------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GD+ K+F+E+ + ++ WN MI+G +Q E++ QAL
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQF-EFNKQAL 179
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAM 378
FK++ +G+ PD+ + V+ C+ L L G+++HA +K + + V ++L M
Sbjct: 180 SLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSV-VGSSLAHM 238
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K G+L D +L MP V+ N++IAG AQ+G E L + M P ITF
Sbjct: 239 YIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITF 298
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
VSVLSAC+ + +GQ+ + + G S +I + R+G L D
Sbjct: 299 VSVLSACSELATLGQGQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLED--------- 348
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
++KA F+ E + V + + Y G+ EE + M D
Sbjct: 349 ------SIKA---FVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMED 389
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G R L+ G+ +HA LK S+ + + +Y K G LS
Sbjct: 196 TLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS--------- 246
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+L +P +V++NTLI+ A G E L+ +
Sbjct: 247 ----------------------DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN 284
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ F D T +++A S L +Q+H I G +V +SL++ YSR+G
Sbjct: 285 MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSG 344
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+++ + F + E D V W+SM+ AYG H G EAL+LF +M L++ + T S+L
Sbjct: 345 CLEDSIKAFVDR-ENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLL 403
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + G ++ ++K + I + ++DL + +G + + + +P Q
Sbjct: 404 YACSHSGLKEKGTEYFDLMVKK-YKLKPRIEHYTCVVDLLGR-AGRLEEAEGMIRSMPVQ 461
Query: 296 PDLVLWNTMISG 307
PD ++W T+++
Sbjct: 462 PDGIIWKTLLAA 473
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 342/604 (56%), Gaps = 51/604 (8%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHY 163
D SA+ + M + D T S LI CL K++H G+
Sbjct: 265 DLPSAMHVLDSMERRGVWADSITYSELIKC-----CLAHGAVREGKRVHRHIFSNGYHPK 319
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+ N L+ Y + L+EA+ +F +M E ++ VSW +M+ AY + A++L M
Sbjct: 320 TFLTNILINMYVKFNLLEEAQVLFDKMPE-RNVVSWTTMISAYSNAQLNDRAMRLLAFMF 378
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ +M+T +S+L A L DL Q H+ ++K G + + S LID+Y+K G++
Sbjct: 379 RDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKM-GEL 434
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ +KVF E+ D V+WN++I+ ++Q + D+AL +K + RVG+ D + V+ A
Sbjct: 435 LEALKVFREMMTGDSVVWNSIIAAFAQHSD-GDEALHLYKSMRRVGFPADQSTLTSVLRA 493
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C++LS LG+Q H +K + + +NNAL+ MY KCG+LEDA+ +F+RM + + +S
Sbjct: 494 CTSLSLLELGRQAHVHVLKFD---QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVIS 550
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
++MIAG AQ+G MEAL LFE M P +IT + VL AC+H G V EG YF M
Sbjct: 551 WSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMN 610
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK--------------- 507
+++G +P EHY CM+DLLGRA KL D +LI M P + +
Sbjct: 611 NLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLA 670
Query: 508 --AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
AA L+L+P + YV+L+NIYA S +W +VA +RR M+ RG++K+PG SWIEV KQ
Sbjct: 671 TYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQ 730
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F+ D SHP I EI+ L + ++ AGYVPD +E L +HSEKL
Sbjct: 731 IHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKL 790
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+ FG++S + I + KNL+ICGDCH K I+ + R I +RD R+H F+DG CSC
Sbjct: 791 AIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSC 850
Query: 674 GDYW 677
GDYW
Sbjct: 851 GDYW 854
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 161/292 (55%), Gaps = 6/292 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F+ H F N+L+ Y + + A+ LFD++P+ ++VS+ T+ISAY++ +
Sbjct: 310 HIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDR 369
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
A+ L M + FT S ++ A L +KQLH + G + V ++L+ Y
Sbjct: 370 AMRLLAFMFRDGVMPNMFTFSSVLRACE-RLYDLKQLHSWIMKVGLESDVFVRSALIDVY 428
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ G L EA +VF EM D V WNS++ A+ QH +G EAL L++ M + D TL
Sbjct: 429 SKMGELLEALKVFREM-MTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTL 487
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A TSL L G Q H H++K F Q+ + + L+D+Y KC G + D +F +
Sbjct: 488 TSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKC-GSLEDAKFIFNRMA 544
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ D++ W+TMI+G +Q +S +AL F+ + G P+ + + V+ ACS+
Sbjct: 545 KKDVISWSTMIAGLAQN-GFSMEALNLFESMKVQGPKPNHITILGVLFACSH 595
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 38/209 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C L G+ H LK L+N + +Y KCG L A FN+
Sbjct: 486 TLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRM 543
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFD----QIPQPDLVSYNTLISAYADCGDTESAL 116
+V S++ ++A A+ A LF+ Q P+P+ ++ ++ A + G
Sbjct: 544 AKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGW 603
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M NNL I G +HY +L R
Sbjct: 604 YYFRSM--------------------NNL--------YGIDPGREHYG----CMLDLLGR 631
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
LD+ ++ +EM D V+W +++ A
Sbjct: 632 AEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 373/670 (55%), Gaps = 61/670 (9%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
F+ N L+A YA+ R+ ++ LF+ D+VS+NT+IS+++ AL+ F+ M
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNGFLD 181
+ + DG T++ ++ A S+ L + K++H + + V ++L+ Y ++
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 350
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTA 240
+RVF + + E+ WN+M+ Y ++ +AL LF EM+ + L + T+AS++ A
Sbjct: 351 SGRRVFDHILGRRIEL-WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 409
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
E H + +K GF ++ ++ + L+D+Y++ G M +F+ + D V
Sbjct: 410 CVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRM-GKMDISETIFDSMEVRDRVS 468
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRV-----------------GYHPDDCSFVCVISA 343
WNTMI+GY YS+ AL ++ R+ Y P+ + + V+
Sbjct: 469 WNTMITGYVLSGRYSN-ALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPG 527
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C+ L+ + GK+IHA I+ + S+ I+V +ALV MY+KCG L +RR+F+ MP N ++
Sbjct: 528 CAALAAIAKGKEIHAYAIRNMLASD-ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT 586
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLET-----NIPPTNITFVSVLSACAHTGKVAEGQKY 457
N +I HG G EAL LF+ M+ P +TF++V +AC+H+G ++EG
Sbjct: 587 WNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL 646
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL----------- 506
F MK G EP +HY+C++DLLGRAG+L +A L+ MP +
Sbjct: 647 FYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 706
Query: 507 -------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
AA + L LEP+ A YV+L+NIY+++G W + +R+ MR GV+K+PG SW
Sbjct: 707 QNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSW 766
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLV 607
IE + ++H F+A D SHP +++H +LE +S KM++ GYVPD KE L
Sbjct: 767 IEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLC 826
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFG+L+T G I V KNLR+C DCH A KFIS I REI VRD RFH FK
Sbjct: 827 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFK 886
Query: 668 DGRCSCGDYW 677
+G CSCGDYW
Sbjct: 887 EGTCSCGDYW 896
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 251/524 (47%), Gaps = 65/524 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK G +DL TG+ +HA +K S ++N + +Y KCG
Sbjct: 95 FPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCG------------ 142
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I ++FD+I D VS+N+ I+A E AL F+
Sbjct: 143 -------------------GIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFR 183
Query: 121 DMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
M+ + + FTL + A SN L L KQLH ++ G D NN+L+ Y+
Sbjct: 184 AMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYA 242
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G +D++K +F + +D VSWN+M+ ++ Q EAL F+ MV + LD T+A
Sbjct: 243 KLGRVDDSKALFESFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIA 301
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A + LE L G + HA+++++ +NS +GS L+D+Y C + +VF+ I
Sbjct: 302 SVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR-QVESGRRVFDHIL 360
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSLGK 353
+ LWN MISGY+ + ++AL F ++ +V G P+ + V+ AC + K
Sbjct: 361 GRRIELWNAMISGYA-RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNK 419
Query: 354 Q-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH +K+ + +R V NAL+ MYS+ G ++ + +FD M + VS N+MI GY
Sbjct: 420 ESIHGYAVKLGFKEDRY-VQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVL 478
Query: 413 HGIGMEALRLFEWM--LETNI---------------PPTNITFVSVLSACAHTGKVAEGQ 455
G AL L M +E P IT ++VL CA +A+G+
Sbjct: 479 SGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGK 538
Query: 456 KYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + +++M + S ++D+ + G L + R+ MP
Sbjct: 539 EIHAYAIRNMLASDITVG--SALVDMYAKCGCLNLSRRVFNEMP 580
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 140/268 (52%), Gaps = 9/268 (3%)
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+ SW + + + + EA+ + EM D + ++L A + L+DL G Q
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 254 HAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HA +K G+ +S + + L+++Y KC G + D KVF+ I D V WN+ I+ + E
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGG-IGDVCKVFDRITDRDQVSWNSFIAALCRFE 173
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP----SLGKQIHALTIKIEIRSNR 368
++ +QAL F+ + + V V ACSNL LGKQ+H ++++ +
Sbjct: 174 KW-EQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG--DQK 230
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
NNAL+AMY+K G ++D++ LF+ + + VS N+MI+ ++Q EAL F M+
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ +T SVL AC+H ++ G++
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGKE 318
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 183/433 (42%), Gaps = 81/433 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +HA L+N N I
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRN---------NDLI------------------- 330
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + L+ Y ++ S R++FD I + +N +IS YA G E AL LF
Sbjct: 331 --ENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFI 388
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL-------IKQLHCLAIYCGFDHYASVNNSLLTC 173
+M G + AS C+ + +H A+ GF V N+L+
Sbjct: 389 EM----IKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDM 444
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ------- 226
YSR G +D ++ +F M E++D VSWN+M+ Y AL L EM ++
Sbjct: 445 YSRMGKMDISETIFDSM-EVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKK 503
Query: 227 ----------LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
+ TL ++L +L + G + HA+ I++ + +GS L+D+Y
Sbjct: 504 DDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMY 563
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL----NRVG-YH 331
AKC G + +VF E+P +++ WN +I + ++AL FK + R G
Sbjct: 564 AKC-GCLNLSRRVFNEMPNKNVITWNVLIMACGMHGK-GEEALELFKNMVAEAGRGGEAK 621
Query: 332 PDDCSFVCVISACSN---LSPSLG-----KQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
P++ +F+ V +ACS+ +S L K H +E S+ + +V + + G
Sbjct: 622 PNEVTFITVFAACSHSGLISEGLNLFYRMKHDHG----VEPTSDHYA---CVVDLLGRAG 674
Query: 384 NLEDARRLFDRMP 396
LE+A L + MP
Sbjct: 675 QLEEAYELVNTMP 687
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 40/294 (13%)
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
P W + ++ ++ +A+ + ++ G PD+ +F V+ A S L G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFR-EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+QIHA +K S+ ++V N LV MY KCG + D ++FDR+ + + VS NS IA +
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE-G 471
+AL F M N+ ++ T VSV AC++ G V G + + K + G+ G
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLG-VMHGLR---LGKQLHGYSLRVG 227
Query: 472 EHYS----CMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLA 527
+ + ++ + + G++ D++ L E+ F+ + V + +
Sbjct: 228 DQKTFTNNALMAMYAKLGRVDDSKALFES---------------FVD---RDMVSWNTMI 269
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKK--------PGFSWIE---VKKQMHVFV 570
+ ++ S ++ E RLM GV+ P S +E V K++H +V
Sbjct: 270 SSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 323
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/626 (38%), Positives = 356/626 (56%), Gaps = 40/626 (6%)
Query: 86 QLFDQIPQPDLVSYNTLISAYA--DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
++ DQ +P++ +NT+I DC + ++ ++ MR++ D FT ++ A +
Sbjct: 63 RILDQTKEPNIFLFNTMIRGLVLNDC--FQESIEIYHSMRKEGLSPDSFTFPFVLKACAR 120
Query: 144 NLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L ++H L + G + A V SL+ Y++ GF+D A +VF ++ + K+ SW +
Sbjct: 121 VLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPD-KNFASWTA 179
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
+ Y + EA+ +F+ ++ + L D ++L +L+A DL G ++ ++G
Sbjct: 180 TISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENG 239
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+N + + L+D Y KC G+M VF+ + + ++V W++MI GY+ +AL
Sbjct: 240 MVRNVFVATALVDFYGKC-GNMERARSVFDGMLEKNIVSWSSMIQGYASNG-LPKEALDL 297
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F K+ G PD + V V+ +C+ L LG L E N + + AL+ MY+
Sbjct: 298 FFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSV-LGTALIDMYA 356
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG ++ A +F M + + V N+ I+G A G +AL LF M ++ I P TFV
Sbjct: 357 KCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVG 416
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
+L AC H G V EG++YF+ M+ +F PE EHY CM+DLLGRAG L +A +LI++MP
Sbjct: 417 LLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPME 476
Query: 501 PGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
+I A + LEP ++ YV+L+NIYAAS KWEE A IR
Sbjct: 477 ANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIR 536
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--- 600
+M +RGV+K PG+SWIEV +H F+ D SHP+ ++I+ L E+++ +K AGYVP
Sbjct: 537 SIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTD 596
Query: 601 ---------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
+KE + HSEKLAVAFGL+ST+ + ILV+KNLR+CGDCH AIK IS IA
Sbjct: 597 HVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIA 656
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
GREI VRD RFHCF DG CSC DYW
Sbjct: 657 GREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 208/473 (43%), Gaps = 51/473 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C D G +H+L +K A++ I LY+KCG + A
Sbjct: 110 TFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAF------ 163
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++FD IP + S+ IS Y G A+ +F+
Sbjct: 164 -------------------------KVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ E D F+L +++A + +L + + G V +L+ Y + G
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG 258
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+ VF M E K+ VSW+SM+ Y + EAL LF +M++ L D Y + +L
Sbjct: 259 NMERARSVFDGMLE-KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVL 317
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ L L G + ++LI F NS +G+ LID+YAKC G M +VF + + D
Sbjct: 318 CSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKC-GRMDRAWEVFRGMRKKD 375
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
V+WN ISG + D ALG F ++ + G PD +FV ++ AC++ G++
Sbjct: 376 RVVWNAAISGLAMSGHVKD-ALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYF 434
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
+ + I +V + + G L++A +L MP E N + +++ G H
Sbjct: 435 NSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH-- 492
Query: 416 GMEALRLFEWMLETNIP-----PTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+L E +L+ I N +S + A +H K E K S+M +
Sbjct: 493 --RDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASH--KWEEAAKIRSIMSE 541
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 21/210 (10%)
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K IHA +++ + + +N L ++ GN + R+ D+ E N N+MI G
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFN-FGNTNYSFRILDQTKEPNIFLFNTMIRGLVL 85
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+ E++ ++ M + + P + TF VL ACA G K S++ G E +
Sbjct: 86 NDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKA-GCEADAF 144
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
+I+L + G + +A ++ + +P N + + Y
Sbjct: 145 VKISLINLYTKCGFIDNAFKVFDDIP------------------DKNFASWTATISGYVG 186
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
GK E + R + + G+ + FS +EV
Sbjct: 187 VGKCREAIDMFRRLLEMGL-RPDSFSLVEV 215
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 360/629 (57%), Gaps = 36/629 (5%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I A +F+ I +P+ +YN +I A ++AL LFK M EK D FT S ++ A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 141 SSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S L + Q+H L + GF V N+L+ Y+ G + A+ VF M E + V+
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPE-RSIVA 189
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WNSM+ Y ++ E ++LF++++ L++ D T+ S+L A L +L G +++
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
G +N+ + + LID+YAKC G + K+F+E+ + D+V W+ MISGY+Q + +A
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKC-GQVDTARKLFDEMDKRDVVAWSAMISGYAQADR-CKEA 307
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
L F ++ + +P++ + V V+ +C+ L GK +H K +++ +++ L+
Sbjct: 308 LNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT-VTLGTQLID 366
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
Y+KCG ++ + +F M N + ++I G A +G G AL F MLE ++ P ++T
Sbjct: 367 FYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F+ VLSAC+H V +G+ F+ M+ F EP EHY CM+D+LGRAG L +A + I+ M
Sbjct: 427 FIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNM 486
Query: 498 PFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
PF P ++ A K+ H +LEP+++ Y++L+N YA G+ E+
Sbjct: 487 PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAI 546
Query: 541 TIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
+R L++++ ++K PG S IE+ +H F +EDG H KEIH+ L++M +++K+ GYVP
Sbjct: 547 RVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVP 606
Query: 601 D------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+ KE + HHSEKLA+A+GL+ TS I + KNLR+C DCHNA KFIS
Sbjct: 607 NTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFIS 666
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ R I VRD RFH FKDG CSC DYW
Sbjct: 667 QVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 220/471 (46%), Gaps = 47/471 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C + L G+ +HAL LK+ + ++ N I +Y+ CG
Sbjct: 123 TFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCG------------ 170
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+I AR +FD +P+ +V++N+++S Y G + + LF+
Sbjct: 171 -------------------QIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFR 211
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ E R + D T+ ++ A NL + + + + G ++ SL+ Y++ G
Sbjct: 212 KILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+++F EM + +D V+W++M+ Y Q EAL LF EM + + T+ S+L
Sbjct: 272 QVDTARKLFDEMDK-RDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVL 330
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ L G H ++ K +G+ LID YAKC G + ++VF+E+ ++
Sbjct: 331 YSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKC-GYIDRSVEVFKEMSFKNV 389
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQI-H 356
W +I G + E AL F + P+D +F+ V+SACS+ G+ + +
Sbjct: 390 FTWTALIQGLANNGE-GKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFN 448
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
++ +I RI +V + + G LE+A + D MP N V +++A H
Sbjct: 449 SMRRDFDIEP-RIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAH-- 505
Query: 416 GMEALRLFEWMLE--TNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMMKD 463
+ + + E LE T + P + ++ + + A G+V + + S++K+
Sbjct: 506 --KNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKE 554
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 381/708 (53%), Gaps = 72/708 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK CV LV GK +H K +++ + LYS+ G L AH
Sbjct: 126 TFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH------ 176
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F +P D+ S+N +IS + G+ AL +
Sbjct: 177 -------------------------KVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D T++ + + A S+++ +H + G D V+N+L+ YS+ G
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A+ VF +M E++D VSWNS++ AY Q+ + AL+ F+ M + D+ T+ S+
Sbjct: 272 RLQDAQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ F+ L D +I+ + ++ IG+ L+++YAK G M VF+++P+ D
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL-GYMNCAHTVFDQLPRKD 389
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSP-SLGKQI 355
+ WNT+++GY+Q + +A+ + + P+ ++V +I A S++ G +I
Sbjct: 390 TISWNTLVTGYTQ-NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA IK + + + V L+ +Y KCG LEDA LF +P +V N++IA HG
Sbjct: 449 HAKLIKNSLYLD-VFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGR 507
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EAL+LF+ ML + +ITFVS+LSAC+H+G V EGQK F +M+ +G +P +HY
Sbjct: 508 GEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYG 567
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPS 518
CM+DLLGRAG L A L+ MP P + A++ L+++
Sbjct: 568 CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE 627
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YV+L+NIYA + KWE V +R L RDRG++K PG+S + V + VF + +HP
Sbjct: 628 NVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPK 687
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
EI+ L+ +S KMK GYVPD KE+ L HSE+LA+AFG++ST
Sbjct: 688 YTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRS 747
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
PI + KNLR+CGDCHNA K+IS I+ REI VRD+ RFH FKDG CSC
Sbjct: 748 PIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 242/477 (50%), Gaps = 31/477 (6%)
Query: 40 FILLYSKCGCLSAAH--HA----FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ 93
F L++ C ++A HA F ++Q N+ L+ Y I+ +R FD I +
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGKSQ--NIVLSTKLINLYVTHGDISLSRSTFDYIHK 82
Query: 94 PDLVSYNTLISAYADCGDTESALS----LFKDMREKRFDTDGFTLSGLITASSNNLCLIK 149
++ S+N++ISAY G A++ LF D +T ++ A + L K
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS-LVDGK 141
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
++HC GF+ V SL+ YSR G LD A +VF +M +KD SWN+M+ + Q+
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM-PVKDVGSWNAMISGFCQN 200
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
AL + M + +D T+ASIL +D++ G+ H H++K G + +
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ LI++Y+K G ++D VF+++ DLV WN++I+ Y Q + S AL FK + G
Sbjct: 261 NALINMYSKF-GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPS-TALRFFKGMQLGG 318
Query: 330 YHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
PD + V + S S LS + + I I+ E + + NALV MY+K G + A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAH 447
+FD++P +T+S N+++ GY Q+G+ EA+ + M E + P T+VS++ A +H
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438
Query: 448 TGKVAEGQKYF------SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G + +G K S+ D+F +C+IDL G+ G+L DA L +P
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVF-------VATCLIDLYGKCGRLEDAMSLFYEIP 488
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/709 (35%), Positives = 377/709 (53%), Gaps = 73/709 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ +++ C D + K L + NL P +++ N + LY+K G LS A + F+
Sbjct: 25 YTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNM 84
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V+S+N LL+AYA+ + + +FDQ+P D VSYNTLI+ +A G + AL +
Sbjct: 85 TKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLV 144
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E F ++ + A S L L KQ+H + V N++ Y++ G
Sbjct: 145 RMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCG 204
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+ +F M + K+ VSWN M+ Y + E + LF EM L D+ T++++L
Sbjct: 205 DIDKARLLFDGMID-KNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL 263
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A Y +C G + D +F ++P+ D
Sbjct: 264 NA-----------------------------------YFRC-GRVDDARNLFIKLPKKDE 287
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+ W TMI GY+Q D A F + R PD + ++S+C+ L+ G+ +H
Sbjct: 288 ICWTTMIVGYAQNGREED-AWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHG 346
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ + I N + V++ALV MY KCG DAR +F+ MP N ++ N+MI GYAQ+G +
Sbjct: 347 KVVVMGI-DNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVL 405
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L+E M + N P NITFV VLSAC + V EGQKYF + + G P +HY+CM
Sbjct: 406 EALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISE-HGIAPTLDHYACM 464
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG--------SIALK--------AANHFLQLEPSNAV 521
I LLGR+G + A LI+ MP P S+ K AA+H +L+P NA
Sbjct: 465 ITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAELAASHLFELDPRNAG 524
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
PY+ML+N+YAA G+W++VA +R LM+++ +K +SW+EV ++H FV+ED HP + +
Sbjct: 525 PYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGK 584
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG-EPI 628
I+ L + ++Q GY PD K + + +HSEKLA+AF L+ G PI
Sbjct: 585 IYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPI 644
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KN+R+C DCH +KF S R I +RD+ RFH F G+CSC D W
Sbjct: 645 RIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++ +C L G+ +H + + S +S+ + +Y KCG A F
Sbjct: 324 TISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETM 383
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV ++N ++ YA+ ++ A L++++ Q PD +++ ++SA + +
Sbjct: 384 PIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQ 443
Query: 117 SLFKDMRE 124
F + E
Sbjct: 444 KYFDSISE 451
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/649 (37%), Positives = 350/649 (53%), Gaps = 37/649 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H + + N+LL + A +F Q P P++ YNTLI A+S++
Sbjct: 32 HQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYAS 91
Query: 122 MREKRFDTDGFTLSGLITASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR+ F D FT ++ A + + + LH L I GFD V L+ YS+NG
Sbjct: 92 MRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNG 151
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
FL +A++VF E+ E K+ VSW +++ Y + EAL LF+ ++ + L D +TL IL
Sbjct: 152 FLTDARKVFDEIPE-KNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRIL 210
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + + DL G ++ +SG N + + L+D+YAKC G M + +VF+ + + D+
Sbjct: 211 YACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC-GSMEEARRVFDGMVEKDV 269
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W+ +I GY+ +AL F ++ R PD + V V SACS L LG
Sbjct: 270 VCWSALIQGYASNG-MPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARG 328
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L E SN + + AL+ Y+KCG++ A+ +F M + V N++I+G A G
Sbjct: 329 LMDGDEFLSNPV-LGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVG 387
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A +F M++ + P TFV +L C H G V +G +YFS M +F P EHY CM
Sbjct: 388 AAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCM 447
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-------------ANHFL----QLEPSNA 520
+DL RAG L +A+ LI +MP SI A A H L +LEP N+
Sbjct: 448 VDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNS 507
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+NIY+AS +W+E IR + +G+QK PG SW+EV +H F+ D SHP+
Sbjct: 508 GHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSH 567
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ LE + + +++AGY P +KE L HSEKLAVAF L+ST + I
Sbjct: 568 KIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVI 627
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+CGDCH AIK +S + GREI VRD RFH F +G CSC DYW
Sbjct: 628 RVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 27/302 (8%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCS---GDMRDCMKVFEEIPQPDLVLWNTMISGY 308
Q H L++ G HQ+++ LI+L + S + VF + P P++ L+NT+I G
Sbjct: 21 QCHCLLLRLGLHQDTY----LINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGM 76
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP--SLGKQIHALTIKIEIRS 366
+ + D A+ + + + G+ PD+ +F V+ AC+ L +G +H+L IK
Sbjct: 77 VSNDAFRD-AVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + V LV +YSK G L DAR++FD +PE N VS ++I GY + G EAL LF +
Sbjct: 136 D-VFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGL 194
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
LE + P + T V +L AC+ G +A G+ M++ G + ++D+ + G
Sbjct: 195 LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES-GSVGNVFVATSLVDMYAKCGS 253
Query: 487 LTDAERLIEAM-------------PFNPGSIALKAANHFLQLEPSNAVP--YVMLANIYA 531
+ +A R+ + M + + +A + F +++ N P Y M+ A
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313
Query: 532 AS 533
S
Sbjct: 314 CS 315
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 39/418 (9%)
Query: 1 TFRQVLKTCVGRRDLV-TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF VLK C G SLH+L +K + ++ + LYSK G L+ A F++
Sbjct: 103 TFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDE 162
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
NV VS+ +I Y + G AL LF
Sbjct: 163 IPEKNV-------------------------------VSWTAIICGYIESGCFGEALGLF 191
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + E D FTL ++ A S +L + + G V SL+ Y++
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++EA+RVF M E KD V W++++ Y + EAL +F EM + D Y + +
Sbjct: 252 GSMEEARRVFDGMVE-KDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGV 310
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+A + L L G + F N +G+ LID YAKC G + +VF+ + + D
Sbjct: 311 FSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKC-GSVAQAKEVFKGMRRKD 369
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
V++N +ISG + + A G F ++ +VG PD +FV ++ C++ G +
Sbjct: 370 CVVFNAVISGLAMC-GHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYF 428
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+ + + I +V + ++ G L +A+ L MP E N++ +++ G H
Sbjct: 429 SGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLH 486
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/717 (35%), Positives = 375/717 (52%), Gaps = 74/717 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L +C L G +H + + + + +SN + +Y KCG LS A F +
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 61 QHA-NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ NV S++++ A+A + A + F + L+ SA S+ +L
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFML---LLGIKATKSAMVTILSACSSPALV 176
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+D R +H GF+ V N+++T Y R G
Sbjct: 177 QDGR--------------------------MIHSCIALSGFESELLVANAVMTMYGRCGA 210
Query: 180 LDEAKRVFYEMGE-IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA++VF M E ++D VSWN M+ Y + G +A+QL+Q M QL D T S+L
Sbjct: 211 VEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLL 267
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A +S ED+ G H ++ +N +G+ L+ +YAKC G + VF+++ Q +
Sbjct: 268 SACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC-GSHTEARAVFDKMEQRSI 326
Query: 299 VLWNTMISGYSQKEEYSD------QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
+ W T+IS Y ++ ++ Q L K + PD +FV +++AC+++S
Sbjct: 327 ISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQ 386
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGY 410
GK + + S++ +V A+V +Y KCG +E+ARR+FD + V L N+MIA Y
Sbjct: 387 GKMVSEQAASCGLSSDK-AVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVY 445
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKDMFGFEP 469
AQ G EAL+LF M + P + +FVS+L AC+HTG +G+ YF SM +
Sbjct: 446 AQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTR 505
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHF 512
+H+ C+ DLLGR G+L +AE +E +P P ++A + AN
Sbjct: 506 TIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKL 565
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+LEP A YV L+NIYA KW VA +R+ M ++GV+K+ G S IE+ K MH F
Sbjct: 566 LRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATG 625
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D +HP +EI L ++ +MK+ GYVPD KE+ L HSE+LA+A GL+
Sbjct: 626 DDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLI 685
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G P+ V KNLR+C DCH A K IS IAGR+I VRD RFH FKDG+CSC DYW
Sbjct: 686 STPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 221/430 (51%), Gaps = 19/430 (4%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A+ FD + Q +L S+ L++A+A G ++ L + MR+ D T + + +
Sbjct: 11 AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGD 70
Query: 144 NLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L ++H + + + V+N+LL Y + G L AKRVF +M ++ +SW+
Sbjct: 71 PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 130
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M A+ H EAL+ F+ M+ L + + +IL+A +S + G H+ + SG
Sbjct: 131 MAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSG 190
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP--DLVLWNTMISGYSQKEEYSDQAL 319
F + + ++ +Y +C G + + KVF+ + + D+V WN M+S Y ++D+
Sbjct: 191 FESELLVANAVMTMYGRC-GAVEEARKVFDAMDEALRDVVSWNIMLSTYV----HNDRGK 245
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ R+ PD ++V ++SACS+ LG+ +H + E+ N I V NALV+M
Sbjct: 246 DAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI-VGNALVSM 304
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-------TNI 431
Y+KCG+ +AR +FD+M + + +S ++I+ Y + + EA LF+ MLE +
Sbjct: 305 YAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV 364
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P + FV++L+ACA + +G K S G + + +++L G+ G++ +A
Sbjct: 365 KPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEAR 423
Query: 492 RLIEAMPFNP 501
R+ +A+ P
Sbjct: 424 RIFDAVCSRP 433
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY+ C + DA+ FD + + N S ++A +A G E LR E M + + P +T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F++ L +C + +G + M+ D E + + + ++++ + G L+ A+R+ M
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDS-RLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/625 (38%), Positives = 352/625 (56%), Gaps = 36/625 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR +F QIP P + N++I D + AL +++M + D +T L S
Sbjct: 41 ARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFK-SCR 99
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
N KQ+HC + GF N+L+ YS G L A++VF +M E K VSW +M+
Sbjct: 100 NSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM-EDKTVVSWATMI 158
Query: 204 VAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ Q + EA++LF M+ S + + TL ++LTA DL + H ++ + GF
Sbjct: 159 GVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGF 218
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
++ + + L+D+Y KC G ++ +F++ + +L WN MI+G+ + Y ++AL F
Sbjct: 219 GRHVVLNTVLMDVYCKC-GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY-EEALLLF 276
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
+++ G D + ++ AC++L LGK +HA K I + +++ ALV MY+K
Sbjct: 277 REMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVD-VALGTALVDMYAK 335
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG++E A ++F MPE + ++ ++I G A G AL+ F+ M + P ITFV V
Sbjct: 336 CGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGV 395
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
L+AC+H G V EG +F+ M D +G +P EHY ++D+LGRAG++ +AE LI++MP P
Sbjct: 396 LAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAP 455
Query: 502 GSIAL-----------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
L +AA L+++P ++ YV+L+NIY +S KWEE R
Sbjct: 456 DQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRE 515
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--- 601
LM +RG++K PG S IEV +H FV D SH EI+ LE+M K+K AGYVPD
Sbjct: 516 LMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSE 575
Query: 602 ---------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
KE L HSEKLA+AFGLLSTS G PI V+KNLRIC DCH+A K IS +
Sbjct: 576 VLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYN 635
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
REI VRD RFH FKDG CSC +W
Sbjct: 636 REIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 218/476 (45%), Gaps = 43/476 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + K+C R+ GK +H K Y N + +YS CGCL +A F++
Sbjct: 90 TFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM 146
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN--TLISAYADCGDTESALSL 118
+ V S+ ++ +A+ + A +LFD++ + + V N TL++ C
Sbjct: 147 EDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTAC--------- 197
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
A + +L ++K++H GF + +N L+ Y + G
Sbjct: 198 ---------------------ARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCG 236
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ +F + E K+ SWN M+ + + EAL LF+EM + + D T+AS+L
Sbjct: 237 CVQLARDLFDKAQE-KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLL 295
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A T L L G HA++ K + +G+ L+D+YAKC G + ++VF E+P+ D+
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKC-GSIETAIQVFHEMPEKDV 354
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
+ W +I G + + ++ AL F +++ G PD +FV V++ACS+ +
Sbjct: 355 MTWTALILGLAMCGQ-AENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFN 413
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
+++ I+ I LV + + G + +A L MP + L ++ HG
Sbjct: 414 SMSDTYGIQPT-IEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGN 472
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
A R + +LE + P + T+V + + + K E ++ +M + +P G
Sbjct: 473 LEAAERAAKQLLEID-PYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPG 527
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYS--KCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
KQIHA ++ + + + + +VA S + G+L+ AR +F ++P + + NS+I G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASK-IVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGC 63
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
+ EAL ++ M+ + P TF S+ +C ++ E
Sbjct: 64 TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS--------------------E 103
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
G+ C LG A T A+ + M N G + + A F ++E V + + ++
Sbjct: 104 GKQIHCHSTKLGFASD-TYAQNTLMNMYSNCGCL-VSARKVFDKMEDKTVVSWATMIGVH 161
Query: 531 AASGKW----EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
A +W E V R+M+ V K + + V A M+K IH Y+
Sbjct: 162 A---QWDQPNEAVRLFDRMMKSENV-KPNEVTLVNVLTA----CARARDLAMVKRIHEYI 213
Query: 587 EE 588
+E
Sbjct: 214 DE 215
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/656 (36%), Positives = 369/656 (56%), Gaps = 39/656 (5%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
AF NVF L+ Y+R AR LFD +P D+ S+N +IS G+ A
Sbjct: 241 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 300
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
L + +MR + + T+ ++ ++ +H I G + V+N+L+
Sbjct: 301 LDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G L++A++ F +M I D VSWNS++ AY Q+ + + A F +M D+ T
Sbjct: 361 YAKFGNLEDARKAFQQM-FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L S+ + D H +++ G+ ++ IG+ ++D+YAK G + KVFE
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKL-GLLDSAHKVFEI 478
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSP-S 350
IP D++ WNT+I+GY+Q + +A+ +K + P+ ++V ++ A +++
Sbjct: 479 IPVKDVISWNTLITGYAQNG-LASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 537
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G +IH IK + + + V L+ +Y KCG L DA LF ++P+ ++V+ N++I+ +
Sbjct: 538 QGMKIHGRVIKTNLHLD-VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
HG + L+LF ML+ + P ++TFVS+LSAC+H+G V EG+ F +M++ +G +P
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPS 655
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFL 513
+HY CM+DLLGRAG L A I+ MP P G+I L A++
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+++ N YV+L+NIYA GKWE V +R L R+RG++K PG+S IEV +++ VF +
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 775
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
SHP KEI+ L ++ KMK GY+PD KE L HSE+LA+AFG++S
Sbjct: 776 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 835
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T PI + KNLR+CGDCHNA KFIS I REI VRD+ RFH FKDG CSCGDYW
Sbjct: 836 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 228/449 (50%), Gaps = 30/449 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD-M 122
++F L+ YA ++ +R FDQIPQ D+ ++N++ISAY G A+ F +
Sbjct: 150 SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLL 209
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D +T ++ A L +++HC A GF V SL+ YSR GF
Sbjct: 210 LVSEIRPDFYTFPPVLKA-CGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F +M +D SWN+M+ Q+ +AL + EM + ++ T+ SIL
Sbjct: 269 ARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
L D+ + H ++IK G + + + LI++YAK G++ D K F+++ D+V WN
Sbjct: 328 QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF-GNLEDARKAFQQMFITDVVSWN 386
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA------CSNLSPSLGKQIH 356
++I+ Y Q ++ A G F K+ G+ PD + V + S C N + +H
Sbjct: 387 SIIAAYEQNDD-PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN-----SRSVH 440
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
++ + + NA+V MY+K G L+ A ++F+ +P + +S N++I GYAQ+G+
Sbjct: 441 GFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLA 500
Query: 417 MEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYF------SMMKDMFGFEP 469
EA+ +++ M E I P T+VS+L A AH G + +G K ++ D+F
Sbjct: 501 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV--- 557
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+C+ID+ G+ G+L DA L +P
Sbjct: 558 ----ATCLIDVYGKCGRLVDAMSLFYQVP 582
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 222/475 (46%), Gaps = 54/475 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C D+ T +H +K+ + F ++SN I +Y+K G L A AF Q
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N ++AAY + +A F ++ QPDL++ +L S A D +++
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S+ + + G+ + ++ + N+++ Y++
Sbjct: 438 SVHGFIMRR-----GWLMEDVV---------------------------IGNAVVDMYAK 465
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLA 235
G LD A +VF E+ +KD +SWN+++ Y Q+ EA+++++ M ++ + T
Sbjct: 466 LGLLDSAHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 524
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SIL A+ + L G++ H +IK+ H + + + LID+Y KC G + D M +F ++PQ
Sbjct: 525 SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC-GRLVDAMSLFYQVPQ 583
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQ 354
V WN +IS + ++++ L F ++ G PD +FV ++SACS+ GK
Sbjct: 584 ESSVTWNAIISCHG-IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ-H 413
L + I+ + + +V + + G LE A MP S+ + G + H
Sbjct: 643 CFRLMQEYGIKPS-LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 701
Query: 414 G---IGMEAL-RLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKD 463
G +G A RLFE + N+ + +LS A+ GK K S+ ++
Sbjct: 702 GNIELGKFASDRLFE------VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARE 750
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 128/250 (51%), Gaps = 15/250 (6%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HA L+ +G Q+ I + L++LYA GD+ F++IPQ D+ WN+MIS Y
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANL-GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNG 196
Query: 313 EYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISV 371
+ +A+GCF +L V PD +F V+ AC L G++IH K+ + N + V
Sbjct: 197 HFH-EAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD--GRKIHCWAFKLGFQWN-VFV 252
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+L+ MYS+ G AR LFD MP + S N+MI+G Q+G +AL + + M I
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF----GFEPEGEHYSCMIDLLGRAGKL 487
+T VS+L C G ++ +M+ ++ G E + + +I++ + G L
Sbjct: 313 KMNFVTVVSILPVCPQLGDIST-----AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNL 367
Query: 488 TDAERLIEAM 497
DA + + M
Sbjct: 368 EDARKAFQQM 377
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/639 (37%), Positives = 350/639 (54%), Gaps = 69/639 (10%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AYA S R +FD+IP+ ++V +N +I +Y + AL +FK+M D D
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ ASS +L + Q+H + G D V N L++ Y + G L EA RV
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+M +D VSWNS+V ++ + +AL++ +EM L L D T+AS+L A T+
Sbjct: 197 QM-PCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTN----- 250
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
C ++ ++F ++ LV WN MI+ Y
Sbjct: 251 -----------------------------TCLDNVSFVKEMFMKLANKSLVSWNVMIAVY 281
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSN 367
+A+ F ++ PD S V+ AC +LS L G++IH ++ ++ N
Sbjct: 282 -MNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 340
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + NAL+ MY+KCG LE AR +FD+M + VS SMI+ Y +G G +A+ LF M
Sbjct: 341 LL-LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQ 399
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + P +I FVSVLSAC+H G + EG+ YF +M + P EH+ CM+DLLGRAG++
Sbjct: 400 DLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQV 459
Query: 488 TDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIY 530
+A I+ MP P I L AA+ QL P + YV+L+NIY
Sbjct: 460 DEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIY 519
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A +G+WE+V T+R +M+ +G++K PG S E+ ++H F+A D SHP K+I+ L+
Sbjct: 520 AKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSV 579
Query: 591 RKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
KMK+AGYVP DKE L HSEKLA+AF +L+T+ G PI + KNLR+CG
Sbjct: 580 GKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCG 639
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH A K IS I GREIT+RDT RFH F +G CSCGDYW
Sbjct: 640 DCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK G DL G +HA ++ + + ++ N I +Y KCGCL A +Q
Sbjct: 139 TYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQM 198
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N L+A AR + A
Sbjct: 199 PCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSF 258
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+++F ++ LVS+N +I+ Y + A+ +F M + D D +++ ++ A +
Sbjct: 259 VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGD 318
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L +++H + + N+L+ Y++ G L+ A+ VF +M + +D VSW S
Sbjct: 319 LSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM-KFRDVVSWTS 377
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
M+ AYG + +G +A+ LF M L L D S+L+A
Sbjct: 378 MISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSA 416
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C L+ G+ +H ++ + + L N I +Y+KCGCL A F+Q
Sbjct: 308 SIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 367
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ +V S+ +++AY + A LF ++ PD +++ +++SA + G +
Sbjct: 368 KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 427
Query: 117 SLFKDMREK 125
FK M E+
Sbjct: 428 YYFKLMTEE 436
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 248/710 (34%), Positives = 378/710 (53%), Gaps = 71/710 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL + + G+ +HA +K + ++ N I +YSKCG
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGL----------- 251
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A+ +F Q+ D+VS+NTL++ AL LF
Sbjct: 252 --------------------VEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFH 291
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
D R T S +I +N L L +QLH + GF +V +++ YS+ G
Sbjct: 292 DSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCG 351
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A +F M ++ VSW +M+ Q+ + A LF M + + +T +++L
Sbjct: 352 ELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVL 411
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
TA S+ L+ Q HA +IK+ + +G+ L+ Y+K G+ + + +F+ I D+
Sbjct: 412 TA--SIPILLP--QIHAQIIKTNYQHAPSVGTALLASYSKL-GNTEEALSIFKMIDHKDV 466
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
V W+ M+S YSQ + D A F K++ G P++ + I AC++ + + G+Q H
Sbjct: 467 VAWSAMLSCYSQAGD-CDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFH 525
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A++IK + + I V +ALV MY++ G+++ AR +F+R + + VS NSMI+GYAQHG
Sbjct: 526 AISIKYRYQ-DAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYS 584
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL F M I TF++V+ C H G V EGQ+YF M P EHYSC
Sbjct: 585 KEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSC 644
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSN 519
M+DL RAGKL + LIE MPF G++ + A L LEP +
Sbjct: 645 MVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDD 704
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ YV+L+NIYAA+G+W+E +R+LM + V+K+ G SWI++K ++H F+A D SHP+
Sbjct: 705 SATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLS 764
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
++I+ L+ M+ ++KQ GY P+ KE LV HSE+LA+AFGL++T P
Sbjct: 765 EQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTP 824
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ ++KNLR+CGDCH +K +S I REI +RD RFH F G CSCGD+W
Sbjct: 825 LQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 235/495 (47%), Gaps = 40/495 (8%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+VLK C D V+G+ LH L +K CG F++ A
Sbjct: 104 RVLKVCGLIPDRVSGEQLHCLCVK-------------------CG--------FDR---A 133
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
V L+ Y + + R +F+ +P+ ++V++ +L++ Y ++LF MR
Sbjct: 134 EVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMR 193
Query: 124 EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + FT + +++ AS + L +++H ++ G V NSL+ YS+ G ++
Sbjct: 194 AEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVE 253
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EAK VF +M E +D VSWN+++ + LEALQLF + + L T ++++
Sbjct: 254 EAKAVFRQM-ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLC 312
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+L+ L Q H+ ++K GFH + ++ + ++D Y+KC G++ D +F +P ++V
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKC-GELDDAFNIFLLMPGSQNVVS 371
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTI 360
W MI G Q + A F ++ P++ ++ V++A P L QIHA I
Sbjct: 372 WTAMIGGCIQNADIP-LAAALFSRMREDNVKPNEFTYSTVLTAS---IPILLPQIHAQII 427
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K + + SV AL+A YSK GN E+A +F + + V+ ++M++ Y+Q G A
Sbjct: 428 KTNYQ-HAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGAT 486
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+F M + P T S + ACA + + F + + ++ S ++ +
Sbjct: 487 NVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTM 546
Query: 481 LGRAGKLTDAERLIE 495
R G + A + E
Sbjct: 547 YARKGSIDSARIVFE 561
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 164/309 (53%), Gaps = 8/309 (2%)
Query: 203 VVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
+V YG+ +G EAL F + V + ++ +L + D V G Q H +K G
Sbjct: 71 IVDYGRRGKGRGEALDHFVD-VHRCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCG 129
Query: 262 FHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
F + +G+ L+D+Y KC G + D VFE +P+ ++V W ++++GY Q SD +
Sbjct: 130 FDRAEVGVGTALVDMYMKCGG-VEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSD-VMA 187
Query: 321 CFKKLNRVGYHPDDCSFVCVISA-CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ G P+ +F V+SA S + LG+++HA ++K RS + V N+L+ MY
Sbjct: 188 LFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST-VFVCNSLINMY 246
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
SKCG +E+A+ +F +M + VS N+++AG + +EAL+LF + + T+
Sbjct: 247 SKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYS 306
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+V+ CA+ ++A ++ S + GF +G + ++D + G+L DA + MP
Sbjct: 307 TVIKLCANLKQLALARQLHSCVLK-HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPG 365
Query: 500 NPGSIALKA 508
+ ++ A
Sbjct: 366 SQNVVSWTA 374
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/639 (37%), Positives = 351/639 (54%), Gaps = 69/639 (10%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AYA S R +FD+IP+ ++V +N +I +Y + AL +FK+M D D
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ ASS +L + Q+H + G D V N L++ Y + G L EA RV
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
ZM +D VSWNS+V ++ + +AL++ +EM L L D T+AS+L A T+
Sbjct: 1186 ZM-PCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTN----- 1239
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
C ++ ++F ++ LV WN MI+ Y
Sbjct: 1240 -----------------------------TCLDNVSFVKEMFMKLANKSLVSWNVMIAVY 1270
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSN 367
+A+ F ++ PD S V+ AC +LS L G++IH ++ ++ N
Sbjct: 1271 -MNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 1329
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + NAL+ MY+KCG LE AR +FD+M + VS SMI+ Y +G G +A+ LF M
Sbjct: 1330 LL-LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQ 1388
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + P +I FVSVLSAC+H G + EG+ YF +M + P EH+ CM+DLLGRAG++
Sbjct: 1389 DLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQV 1448
Query: 488 TDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIY 530
+A I+ MP P I L AA+ QL P + YV+L+NIY
Sbjct: 1449 DEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIY 1508
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A +G+WE+V T+R +M+ +G++K PG S E+ ++H F+A D SHP K+I+ L+ +
Sbjct: 1509 AKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLV 1568
Query: 591 RKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
KMK+AGYVP DKE L HSEKLA+AF +L+T+ G PI + KNLR+CG
Sbjct: 1569 GKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCG 1628
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH A K IS I GREIT+RDT RFH F +G CSCGDYW
Sbjct: 1629 DCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK G DL G +HA ++ + + ++ N I +Y KCGCL A +Z
Sbjct: 1128 TYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZM 1187
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N L+A AR + A
Sbjct: 1188 PCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSF 1247
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+++F ++ LVS+N +I+ Y + A+ +F M + D D +++ ++ A +
Sbjct: 1248 VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGD 1307
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L +++H + + N+L+ Y++ G L+ A+ VF +M + +D VSW S
Sbjct: 1308 LSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM-KFRDVVSWTS 1366
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
M+ AYG + +G +A+ LF M L L D S+L+A
Sbjct: 1367 MISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSA 1405
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L+ G+ +H ++ + + L N I +Y+KCGCL A F+Q + +
Sbjct: 1301 VLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRD 1360
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFK 120
V S+ +++AY + A LF ++ PD +++ +++SA + G + FK
Sbjct: 1361 VVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFK 1420
Query: 121 DMREK 125
M E+
Sbjct: 1421 LMTEE 1425
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/708 (35%), Positives = 374/708 (52%), Gaps = 99/708 (13%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN + SKCG + A F+ + S+N ++ AYA R+ AR+LF + P
Sbjct: 44 SNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSC 103
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCL 154
+++++LIS Y G AL LF +M+ + + FT ++ S + L K Q+H
Sbjct: 104 ITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAH 163
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
AI FD A V L+ Y++ + EA+ +F + ++ V W +MV Y Q+ +G +
Sbjct: 164 AIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A++ F++M + + +T SILTA S+ G Q H +++SGF N +GS L+D
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVD 283
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y+KC GD+ + ++ E + D V WN+MI G
Sbjct: 284 MYSKC-GDLSNARRMLETMEVDDPVSWNSMIVG--------------------------- 315
Query: 335 CSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
CV + SL + +H +KI+ + VNNALV MY+K G + A +F++
Sbjct: 316 ----CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEK 371
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT------ 448
M + + +S S++ G +G EALRLF M I P I +VLSA ++
Sbjct: 372 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYA 431
Query: 449 ------------------------------GKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+ G+ YF M++++G +P EHY+CMI
Sbjct: 432 KCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMI 491
Query: 479 DLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAV 521
DLLGR+GKL +A+ L+ M P G++ L +AAN+ +LEP NAV
Sbjct: 492 DLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAV 551
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
PYV+L+N+Y+A+GKWEE A RRLM+ RGV K+PG SWIE+ ++H F++ED SHP E
Sbjct: 552 PYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAE 611
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I++ ++E+ +K+AGYVPD KE L +HSEKLAVAFGLL+ G PI
Sbjct: 612 IYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIR 671
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLRICGDCH A+K++S + R + +RD+ FH F++G CSC DYW
Sbjct: 672 IFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 195/417 (46%), Gaps = 82/417 (19%)
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY----------- 206
CG H +S +N +L+ S+ G +D+A+++F M + +DE SWN+M+ AY
Sbjct: 35 CGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPD-RDECSWNTMIGAYANSGRLNEARK 93
Query: 207 ------------------GQHREG--LEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
G R G +EAL+LF EM + +T S+L +
Sbjct: 94 LFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVL 153
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
L G Q HAH IK+ F N+ + +GL+D+YAKC + + +FE P + + VLW M+
Sbjct: 154 LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC-ILEAEYLFELAPDKRNHVLWTAMV 212
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+GYSQ + +A+ CF+ + G + +F +++AC ++S G Q+H ++
Sbjct: 213 TGYSQNGD-GHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGF 271
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+N + V +ALV MYSKCG+L +ARR+ + M + VS NSMI G + G+G EAL LF
Sbjct: 272 GAN-VFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFR 330
Query: 425 WM------------------------------------LETNIPPTNITFVSVLSACAHT 448
M E I++ S+++ C H
Sbjct: 331 IMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 390
Query: 449 GKVAEGQKYFSMMKDMFGFEPE--------GEHYSCMIDLLGRAGKLTDAERLIEAM 497
G E + F M+ M G P+ + ++ + + G + DA ++ ++M
Sbjct: 391 GSYEEALRLFCEMRIM-GIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSM 446
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C G +H +++ + ++ + + +YSKCG LS A
Sbjct: 242 TFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM 301
Query: 61 QHANVFSFNVLLAAYARQ---------LRIASARQL-FDQIPQPDLVSYNTLISAYADCG 110
+ + S+N ++ RQ RI R + D+ P LV+ N L+ YA G
Sbjct: 302 EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN-NALVDMYAKRG 360
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNN------LCLIKQLHCLAIYCGFDHYA 164
+ A +F EK D D + + L+T +N L L ++ + I+ A
Sbjct: 361 YFDYAFDVF----EKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIA 416
Query: 165 SV----NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
+V +NSL++ Y++ G +++A +VF M EI+D ++W +++V Y Q+ G + Q +
Sbjct: 417 AVLSALDNSLVSMYAKCGCIEDANKVFDSM-EIQDVITWTALIVGYAQNGRGRDYFQSME 475
Query: 221 EMVSLQLGLDMYT 233
E+ ++ G + Y
Sbjct: 476 EVYGIKPGPEHYA 488
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 49/214 (22%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM----------------------- 406
S +N +++ SKCG ++DAR+LFD MP+ + S N+M
Sbjct: 42 SDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIR 101
Query: 407 --------IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
I+GY ++G +EAL LF M P T+ SVL C+ + +G++
Sbjct: 102 SCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIH 161
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+ F+ + ++D+ + + +AE L E P +
Sbjct: 162 AHAIKT-QFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP-----------------DKR 203
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
N V + + Y+ +G + R MR G++
Sbjct: 204 NHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIE 237
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/650 (37%), Positives = 352/650 (54%), Gaps = 46/650 (7%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F +N L+ Y++ R SA+ L P +V++ LI+ G SAL F +MR
Sbjct: 43 FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102
Query: 126 RFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ FT AS + + + KQ+H LA+ G V S YS+ G +EA
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162
Query: 184 KRVFYEMGEIKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+++F EM E ++ +WN+ + V G++ + L A F E ++ T + L A
Sbjct: 163 RKMFDEMPE-RNIATWNAYLSNSVLEGRYDDALTA---FIEFRHEGWEPNLITFCAFLNA 218
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV-FEEIPQPDLV 299
L G Q H +++SGF + + +GLID Y KC C ++ F I +P+ V
Sbjct: 219 CAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKC--HQVGCSEIIFSGISKPNDV 276
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W +MI Y Q +E ++A F + + G P D V+SAC+ LS +GK +H L
Sbjct: 277 SWCSMIVSYVQNDE-EEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTL 335
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K + N I V +ALV MY KCG++EDA R FD MPE N V+ N+MI GYA G
Sbjct: 336 AVKACVVGN-IFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADM 394
Query: 419 ALRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
A+ LF+ M + P +TFV VLSAC+ G V G + F M+ +G EP EHY+C
Sbjct: 395 AVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYAC 454
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPSN 519
++DLLGRAG + A + I+ MP P + AA++ +L+P +
Sbjct: 455 VVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLD 514
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ +V+L+N++AA+G+WEE +R+ M+D G++K G SWI +HVF A+D SH
Sbjct: 515 SGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERN 574
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI L ++ +M+ AGY+PD K + +HSEK+A+AFGL+S G P
Sbjct: 575 SEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVP 634
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLRICGDCH+AIKFIS I GREI VRD FH F+D +CSC DYW
Sbjct: 635 IRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 195/424 (45%), Gaps = 53/424 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF K R + GK +HAL +K ++ +YSK G
Sbjct: 110 TFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAG------------ 157
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
L AR+ +FD++P+ ++ ++N +S G + AL+ F
Sbjct: 158 -----------LTEEARK--------MFDEMPERNIATWNAYLSNSVLEGRYDDALTAFI 198
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ R + ++ + T + A ++ L L +QLH + GF+ SV N L+ Y +
Sbjct: 199 EFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCH 258
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++ +F + + D VSW SM+V+Y Q+ E +A +F + + ++S+L
Sbjct: 259 QVGCSEIIFSGISKPND-VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVL 317
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G H +K+ N +GS L+D+Y KC G + D + F+E+P+ +L
Sbjct: 318 SACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKC-GSIEDAERAFDEMPERNL 376
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH---PDDCSFVCVISACSNL-SPSLGKQ 354
V WN MI GY+ + + +D A+ F ++ G H P+ +FVCV+SACS S ++G +
Sbjct: 377 VTWNAMIGGYAHQGQ-ADMAVTLFDEMT-CGSHRVAPNYVTFVCVLSACSRAGSVNVGME 434
Query: 355 IHALTIKIEIRSNRISVNNA------LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
I E R + +V + + G +E A + +MP TVS+ +
Sbjct: 435 I------FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 488
Query: 409 GYAQ 412
G ++
Sbjct: 489 GASK 492
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 361/648 (55%), Gaps = 37/648 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NV N LL Y+ R A +F + + DL+S+N++++ Y G L + ++
Sbjct: 1081 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 1140
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + T + + A SN CLI K +H L I GF + V N+L+T Y + G +
Sbjct: 1141 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 1200
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EAK+V M + D V+WN+++ + ++ E EA++ ++ + + + T+ S+L A
Sbjct: 1201 MEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 1259
Query: 241 FTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
++ +DL+ G+ HAH++ +GF + ++ + LI +YAKC GD+ +F+ + +
Sbjct: 1260 CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKC-GDLNSSNYIFDGLGNKSPI 1318
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN M++ + ++AL F ++ VG + D SF ++A +NL+ G+Q+H L
Sbjct: 1319 TWNAMVAANAH-HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGL 1377
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK+ S+ + V NA + MY KCG + D ++ + + +S N +I+ +A+HG +
Sbjct: 1378 VIKLGFESD-LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQK 1436
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A F ML+ P ++TFVS+LSAC H G V EG Y+ M FG P EH C+I
Sbjct: 1437 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 1496
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAV 521
DLLGR+G+L+ AE I+ MP P +A K A H L+L+PS+
Sbjct: 1497 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 1556
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+ +N+ A SGKWE+V +R+ M ++K+P SW+++K ++H F + HP
Sbjct: 1557 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 1616
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I L E+ + K+AGYVPD KE L +HSE+LA+AFGL++T +
Sbjct: 1617 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1676
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+ KF+S I GR+I +RD YRFH F G+CSCGDYW
Sbjct: 1677 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 300/585 (51%), Gaps = 56/585 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++L+ C+ ++ G +H + N +L+ I+ Y K G
Sbjct: 33 YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVG------------- 79
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ +AR +FD +P+ +VS+ ++S Y+ G E A LF D
Sbjct: 80 ------------------DVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSD 121
Query: 122 MREKRFDTDGFTLSGLITASSNNLCL---IKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + FT + A ++ CL I+ C+ F V ++L+ +S+ G
Sbjct: 122 MRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQ-KGRFVENLFVKSALVDFHSKCG 180
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A +F M E +D VSWN+M+ Y ++ +F+ M+ L D YTL S+L
Sbjct: 181 KMEDASYLFGTMME-RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 239
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L+ Q H + + G+ + LI+ YAK +G +R + + + + DL
Sbjct: 240 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAK-NGSLRSAKDLRKGMLKKDL 298
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+I+GY+ + YS AL FK++N++ DD +++ C+NL+ +LG QIHA
Sbjct: 299 FSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHA 358
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + S +++ NAL+ MY+K G +EDA+R FD M E N +S S+I+GYA+HG G
Sbjct: 359 FALKYQ-PSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGH 417
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ L++ M P ++TF+S+L AC+HTG AEG + F+ M + + +P EHYSCM
Sbjct: 418 MAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCM 477
Query: 478 IDLLGRAGKLTDAERLI-----------------EAMPFNPGSIALKAANHFLQLEPSNA 520
+DL R G L +A L+ + + S+ +AA++ ++P N+
Sbjct: 478 VDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENS 537
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
V YV+LA+IY+A+G W++ IR+LM +R +K G+S+ + K+
Sbjct: 538 VNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 239/477 (50%), Gaps = 14/477 (2%)
Query: 53 AHHAFNQTQHAN--VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCG 110
A HAF N +F N L+ Y++ I AR +FD++ + S++T++S Y G
Sbjct: 765 ALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVG 824
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYASVN 167
E A+ LF M + +GF ++ LITA S + + Q+H + G V
Sbjct: 825 LYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVG 884
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+L+ Y G + A+++F EM + + VSW S++V Y E L ++Q M +
Sbjct: 885 TALVHFYGSIGLVYNAQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 943
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T A++ ++ LED V G Q H+I+ GF + + + LI +++ S C
Sbjct: 944 SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACY 1003
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+ + + D++ WN MIS Y+ ++L CF + + + + ++S CS++
Sbjct: 1004 -VFDHMNECDIISWNAMISAYAH-HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 1061
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+ IH L +K+ + SN + + N L+ +YS+ G EDA +F M E + +S NSM
Sbjct: 1062 DNLKWGRGIHGLVVKLGLDSN-VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+A Y Q G ++ L++ +L+ ++TF S L+AC++ + E + +++ + G
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII-VAG 1179
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA--ANHFLQLEPSNAV 521
F + ++ + G+ G + +A+++++ MP P + A H EP+ AV
Sbjct: 1180 FHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHAENEEPNEAV 1235
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 185/353 (52%), Gaps = 11/353 (3%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K LH I + N+L+ YS+ G ++ A+ VF EM ++E SW++M+ Y
Sbjct: 764 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH-RNEASWSTMLSGY-- 820
Query: 209 HREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG-GLQFHAHLIKSGFHQN 265
R GL EA+ LF +M L + + + +AS++TA + + G Q H ++K+G +
Sbjct: 821 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 880
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
++G+ L+ Y G + + K+FEE+P ++V W +++ GYS + L ++++
Sbjct: 881 VYVGTALVHFYGSI-GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN-PGEVLNVYQRM 938
Query: 326 NRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
+ G + +F V S+C L LG Q+ I+ + +SV N+L++M+S +
Sbjct: 939 RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE-DSVSVANSLISMFSSFSS 997
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E+A +FD M E + +S N+MI+ YA HG+ E+LR F WM + + T S+LS
Sbjct: 998 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 1057
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
C+ + G+ ++ + G + + ++ L AG+ DAE + +AM
Sbjct: 1058 CSSVDNLKWGRGIHGLVVKL-GLDSNVCICNTLLTLYSEAGRSEDAELVFQAM 1109
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ LH L +K +++N + +Y KCG + Q + + S+N+L++A
Sbjct: 1368 LEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISA 1427
Query: 75 YARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
+AR AR+ F ++ P+PD V++ +L+SA G + L+ + M +
Sbjct: 1428 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE----- 1482
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
++ G +H + + L R+G L A+ EM
Sbjct: 1483 -----------------------FGVFPGIEHCVCIIDLL----GRSGRLSHAEGFIKEM 1515
Query: 191 GEIKDEVSWNSMVVA 205
++++W S++ A
Sbjct: 1516 PVPPNDLAWRSLLAA 1530
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 347/617 (56%), Gaps = 55/617 (8%)
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL 154
D+VS N I+++ D ESA ++F+ M + T LSG + +K+ H L
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGK----VKEAHEL 127
Query: 155 AIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
FD + N +L CY R+ + A F +M +KD SWN+++ + Q+
Sbjct: 128 -----FDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKM-PVKDIASWNTLISGFAQNG 181
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+ +A LF M + + +++++ + DL + L K+ ++ + +
Sbjct: 182 QMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEE----LYKNVGMKSVVVET 233
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
++ Y K G + ++F+ + +LV WN+MI+GY + D L FK +
Sbjct: 234 AMLTGYMKF-GKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAED-GLKVFKTMIESRV 291
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ S V+ CSNLS LG+Q+H L K + S + +L++MY KCG+L+ A
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPL-SKDTTACTSLISMYCKCGDLDSAW 350
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+LF MP + ++ N+MI+GYAQHG G +AL LF+ M + P ITFV+V+ AC H G
Sbjct: 351 KLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------ 503
V G +YF MK FG E + HY+C+IDLLGRAG+L +A LI+ MPF P +
Sbjct: 411 FVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTL 470
Query: 504 -----------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+A AA + L L+P++A YV LANIYAA+ KW++VA +R++M++ V
Sbjct: 471 LGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVV 530
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K PG+SWIE+K H F + D HP + IH L E+ KMK AGYVPD
Sbjct: 531 KIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEE 590
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
KEK L+ HSEKLA+AFGL+ T+ G PI V KNLR+CGDCH AIKFISAI REI VRDT
Sbjct: 591 HKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDT 650
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH F++G CSCGDYW
Sbjct: 651 TRFHHFRNGFCSCGDYW 667
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 214/426 (50%), Gaps = 19/426 (4%)
Query: 44 YSK-CGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
Y+K G + AH F++ + S+N++L Y R + +A F+++P D+ S+NTL
Sbjct: 114 YTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTL 173
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGF 160
IS +A G + A LF M EK +G + S +I+ +L ++L+ G
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELY---KNVGM 226
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
V ++LT Y + G ++ A+R+F M +K+ V+WNSM+ Y ++ + L++F+
Sbjct: 227 KSVV-VETAMLTGYMKFGKVELAERIFQRMA-VKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
M+ ++ + +L+S+L ++L L G Q H + KS +++ + LI +Y KC
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC- 343
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
GD+ K+F E+P+ D++ WN MISGY+Q +AL F K+ PD +FV V
Sbjct: 344 GDLDSAWKLFLEMPRKDVITWNAMISGYAQHGA-GRKALHLFDKMRNGTMKPDWITFVAV 402
Query: 341 ISACSNLS-PSLGKQ-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
I AC++ LG Q ++ + I + + ++ + + G L++A L MP
Sbjct: 403 ILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHY-TCVIDLLGRAGRLDEAVSLIKEMPFT 461
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT-FVSVLSACAHTGKVAEGQKY 457
++ + G + ++ L F N+ PT+ T +V + + A T K + K
Sbjct: 462 PHAAIYGTLLGACRIHKNLD-LAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKV 520
Query: 458 FSMMKD 463
MMK+
Sbjct: 521 RKMMKE 526
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL C L G+ +H L K+ + I +Y KCG L +A F +
Sbjct: 297 SLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM 356
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V ++N +++ YA+ A LFD++ +PD +++ +I A G + +
Sbjct: 357 PRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGV 416
Query: 117 SLFKDMREK 125
FK M+++
Sbjct: 417 QYFKSMKKE 425
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 253/712 (35%), Positives = 380/712 (53%), Gaps = 74/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C+ L G+ +H LK Y++ I LYS+ G + AH
Sbjct: 152 TFPPVLKACLS---LADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAH------ 202
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F +P D+ S+N +IS + G+ AL +
Sbjct: 203 -------------------------KVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLD 237
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D T+S + I A SN++ +H I G + V+N+L+ YS+ G
Sbjct: 238 RMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFG 297
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A+RVF M E++D VSWNS++ AY Q+ + + AL F+EM+ + + D+ T+ S+
Sbjct: 298 RLQDAQRVFDGM-EVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLA 356
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQP 296
+ F L D G H +++ + + + IG+ L+++YAK DC + VFE++P
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGS--IDCARAVFEQLPSR 414
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D++ WNT+I+GY+Q + +A+ + + P+ ++V ++ A S++ G +
Sbjct: 415 DVISWNTLITGYAQNG-LASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH IK + + + V L+ MY KCG LEDA LF +P+ +V N++I+ HG
Sbjct: 474 IHGRLIKNCLFLD-VFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHG 532
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G +AL+LF+ M + +ITFVS+LSAC+H+G V E Q F M+ + +P +HY
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHY 592
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEP 517
CM+DL GRAG L A L+ MP + A++ L+++
Sbjct: 593 GCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDS 652
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N YV+L+NIYA GKWE +R L RDRG++K PG+S + V + VF A + SHP
Sbjct: 653 ENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHP 712
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
EI+ L ++ KMK GYVPD KE+ L HSE+LA+ FG++ST
Sbjct: 713 QCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPK 772
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI + KNLR+CGDCHNA K+IS I REI VRD+ RFH FKDG CSCGDYW
Sbjct: 773 SPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 273/554 (49%), Gaps = 60/554 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V ++C ++ K LHAL L L + LY+ G LS + F Q
Sbjct: 54 FNLVFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N+FS+N +++AY R+ R Y D D + L
Sbjct: 111 RKNIFSWNSMVSAYVRRGR-------------------------YRDSMDCVTELLSLSG 145
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+R D +T ++ A +L +++HC + GF+H V SL+ YSR G ++
Sbjct: 146 VR-----PDFYTFPPVLKACL-SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVE 199
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A +VF +M ++D SWN+M+ + Q+ EAL++ M + ++ +D T++S+L
Sbjct: 200 VAHKVFVDM-PVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPIC 258
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
D+VGG+ H ++IK G + + + LI++Y+K G ++D +VF+ + DLV W
Sbjct: 259 AQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKF-GRLQDAQRVFDGMEVRDLVSW 317
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N++I+ Y Q ++ ALG FK++ VG PD + V + S LS +G+ +H +
Sbjct: 318 NSIIAAYEQNDD-PVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVV 376
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ I + NALV MY+K G+++ AR +F+++P + +S N++I GYAQ+G+ EA+
Sbjct: 377 RCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAI 436
Query: 421 RLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMI 478
+ M E I P T+VS+L A +H G + +G K + ++K+ + +C+I
Sbjct: 437 DAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVA--TCLI 494
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
D+ G+ G+L DA L F ++ +VP+ + + G E+
Sbjct: 495 DMYGKCGRLEDAMSL------------------FYEIPQETSVPWNAIISSLGIHGHGEK 536
Query: 539 VATIRRLMRDRGVQ 552
+ + MR GV+
Sbjct: 537 ALQLFKDMRADGVK 550
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 247/654 (37%), Positives = 359/654 (54%), Gaps = 72/654 (11%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+Q H N L+ AYA R +FD+I ++V +N +I +Y + G + AL
Sbjct: 63 IDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDAL 122
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+FK M + F D +T ++ A S NL + Q+H + G D + N L++ Y
Sbjct: 123 LVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMY 182
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ +LD A+RV EM +D VSWNSMV Y Q+ +AL+L +EM L+L D T+
Sbjct: 183 GKCKWLDAARRVLDEMPG-RDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTM 241
Query: 235 ASILTAFTSLE-DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A T+ D V LY K DM F ++
Sbjct: 242 GSLLPAVTNTSCDNV--------------------------LYVK---DM------FVKL 266
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LG 352
+ L+ WN MI+ Y ++A+ + ++ G PD S V+ AC +LS + LG
Sbjct: 267 KEKSLISWNVMIAVYVN-NAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLG 325
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
++IH + ++R N + + NAL+ MY+KCG L++AR +FD+M + VS SMI+ Y
Sbjct: 326 RRIHEYVERKKLRPNLL-LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGM 384
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G +A+ LF+ M ++ P I FVSVL+AC+H G V EG+ F++M + +G P E
Sbjct: 385 SGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIE 443
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQL 515
HY+CM+DLLGRAGK+ +A L MP P +IAL AA+H QL
Sbjct: 444 HYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQL 503
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
P + YV+L+NIYA +G+W++V T+R +M +G++K PG S +E+ ++ F+A D S
Sbjct: 504 APEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQS 563
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTS 623
H KEI+ L + +MK+ GY+P DKE L HSEKLA+ F +L+T
Sbjct: 564 HTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTK 623
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KN+R+CGDCH A K IS IA REI +RDT+RFH F+DG CSCGDYW
Sbjct: 624 PGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 109/194 (56%), Gaps = 6/194 (3%)
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
LI H N +G L+ YA C G+ +F+EI ++V +N MI Y Y D
Sbjct: 62 LIDQNLHPNPSLGIKLMRAYAAC-GEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQD 120
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNA 374
AL FK + G++PD+ ++ CV+ ACS +S +L G QIH +K+ + N + + N
Sbjct: 121 -ALLVFKTMANQGFYPDNYTYPCVLKACS-VSGNLWVGLQIHGAVVKLGLDMN-LYIGNG 177
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV+MY KC L+ ARR+ D MP + VS NSM+AGYAQ+G +AL+L M + + P
Sbjct: 178 LVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPD 237
Query: 435 NITFVSVLSACAHT 448
T S+L A +T
Sbjct: 238 AGTMGSLLPAVTNT 251
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 64/358 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C +L G +H +K + + Y+ N + +Y KC L AA ++
Sbjct: 139 TYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEM 198
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
++ S+N ++A YA+ R A
Sbjct: 199 PGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLY 258
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+ +F ++ + L+S+N +I+ Y + A+ L+ M+ + D ++S ++ A +
Sbjct: 259 VKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGD 318
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L +++H + N+L+ Y++ G L EA+ VF +M +D VSW S
Sbjct: 319 LSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQM-MFRDVVSWTS 377
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ AYG +G +A+ LF++M D S+L A + HA L+ G
Sbjct: 378 MISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACS-----------HAGLVDEG 426
Query: 262 ---FHQNSHIG--------SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
F+ + G + ++DL + +G + + + ++P +P+ +W +++S
Sbjct: 427 RYCFNLMAEYGITPGIEHYNCMVDLLGR-AGKIDEAYHLTRQMPMEPNERVWGSLLSA 483
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/647 (37%), Positives = 359/647 (55%), Gaps = 45/647 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
L +AYAR + A+++FD+ + D+VS+N ++ AYA G A LF M +
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
TL T S+ L + +H A+ G D + N+LL Y+R G +EA+ +F
Sbjct: 324 PSKVTLVNASTGCSS-LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFE 382
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED-- 246
G + VSWN+M+ Q + AL+LFQ M + T ++L A S +
Sbjct: 383 --GIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440
Query: 247 --LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP---QPDLVLW 301
+ G + H+ ++ G+ IG+ ++ +YA C G + + F+ + D+V W
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASC-GAIDEAAASFQRGAMEDRHDVVSW 499
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N +IS SQ + +ALG F++++ G P+ + V V+ AC+ + + G +H
Sbjct: 500 NAIISSLSQ-HGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLR 558
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEA 419
+ SN + V AL +MY +CG+LE AR +F+++ E + V N+MIA Y+Q+G+ EA
Sbjct: 559 HSGMESN-VFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L+LF M + P +FVSVLSAC+H G EG + F M+ +G P +HY+C +D
Sbjct: 618 LKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVD 677
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALKA----------------ANHFL-QLEPSNAVP 522
+LGRAG L DAE LI M P + K AN + +L+P +
Sbjct: 678 VLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESA 737
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+NI A +GKW+E A +R M RG++K+ G SWIE+K ++H FVA D SHP +EI
Sbjct: 738 YVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEI 797
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ LE + ++++ GYVPD KE+ L HSE+LA+A G++S+S + + V
Sbjct: 798 YRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRV 856
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
MKNLR+C DCHNA KFIS I +EI VRDT+RFH F DG CSCGDYW
Sbjct: 857 MKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 246/517 (47%), Gaps = 52/517 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C DL G+S+HA +++ + + L+N + +Y CGC
Sbjct: 130 TFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGC----------- 178
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ASA LF+++ + DLVS+N I+A A GD + AL LF+
Sbjct: 179 --------------------VASAMLLFERMER-DLVSWNAAIAANAQSGDLDMALELFQ 217
Query: 121 DMREKRFDTDGFTLSGLITAS-SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ + TL +IT S + + +H + G + V+ +L + Y+R G
Sbjct: 218 RMQLEGVRPARITL--VITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGH 275
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+AK VF E +D VSWN+M+ AY QH EA LF M+ + TL + T
Sbjct: 276 LDQAKEVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAST 334
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+SL G HA ++ G ++ +G+ L+D+Y +C G + +FE IP + V
Sbjct: 335 GCSSLR---FGRMIHACALEKGLDRDIVLGNALLDMYTRC-GSPEEARHLFEGIP-GNAV 389
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-----LSPSLGKQ 354
WNTMI+G SQK + +AL F+++ G P +++ ++ A ++ + + G++
Sbjct: 390 SWNTMIAGSSQKGQMK-RALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRK 448
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP---EHNTVSLNSMIAGYA 411
+H+ + S ++ A+V MY+ CG +++A F R H+ VS N++I+ +
Sbjct: 449 LHSRIVSCGYASE-PAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLS 507
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG G AL F M + P IT V+VL ACA + EG ++ G E
Sbjct: 508 QHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMESNV 566
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ + + GR G L A + E + + A
Sbjct: 567 FVATALASMYGRCGSLESAREIFEKVAVERDVVIFNA 603
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 215/456 (47%), Gaps = 30/456 (6%)
Query: 62 HANVFSF-------NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA + S N LL Y + + ++F ++ D S+ T+I+AY + G +
Sbjct: 52 HARIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKR 111
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F M+++ D T ++ A + +L + +H + G + + + N LL
Sbjct: 112 AIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLH 171
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y G + A +F M +D VSWN+ + A Q + AL+LFQ M +
Sbjct: 172 IYGSCGCVASAMLLFERME--RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARI 229
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL L+ + H+ + +SG Q + + L YA+ G + +VF+
Sbjct: 230 TLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTALASAYARL-GHLDQAKEVFDR 285
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
+ D+V WN M+ Y+Q S+ AL F ++ G P + V + CS+L G
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAAL-LFARMLHEGIPPSKVTLVNASTGCSSL--RFG 342
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IHA ++ + + I + NAL+ MY++CG+ E+AR LF+ +P N VS N+MIAG +Q
Sbjct: 343 RMIHACALEKGLDRD-IVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQ 400
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK----VAEGQKYFSMMKDMFGFE 468
G AL LF+ M + P T++++L A A + +AEG+K S + G+
Sbjct: 401 KGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSC-GYA 459
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
E + ++ + G + +A A F G++
Sbjct: 460 SEPAIGTAVVKMYASCGAIDEA-----AASFQRGAM 490
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 178/358 (49%), Gaps = 19/358 (5%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H + G + + N LL Y + L + + VF + E++DE SW +++ AY +
Sbjct: 49 RRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDVEEVFSRL-EVRDEASWTTIITAYTE 105
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
H + A+ +F M + D T ++L A L DL G HA +++SG S +
Sbjct: 106 HGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVL 165
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+ +Y C G + M +FE + + DLV WN I+ +Q + D AL F+++
Sbjct: 166 ANLLLHIYGSC-GCVASAMLLFERMER-DLVSWNAAIAANAQSGDL-DMALELFQRMQLE 222
Query: 329 GYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
G P + V +S C+ + + + IH++ + + + V+ AL + Y++ G+L+ A
Sbjct: 223 GVRPARITLVITLSVCAKIRQA--RAIHSIVRESGLEQTLV-VSTALASAYARLGHLDQA 279
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+ +FDR E + VS N+M+ YAQHG EA LF ML IPP+ +T V+ + C+
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSL 339
Query: 449 GKVAEGQKYFSMMKDMF---GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
++ M+ G + + + ++D+ R G +A L E +P N S
Sbjct: 340 -------RFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAVS 390
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ-HA 63
VL C G L G +H + + + +++ +Y +CG L +A F +
Sbjct: 537 VLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLF 119
+V FN ++AAY++ A +LF ++ Q PD S+ +++SA + G + +F
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIF 656
Query: 120 KDMRE 124
+ MR+
Sbjct: 657 RSMRQ 661
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/646 (35%), Positives = 365/646 (56%), Gaps = 38/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V N LL+ Y + + R++FD++ D VS+NT+I Y+ G E ++ LF +M
Sbjct: 309 DVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV 368
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F D T++ ++ A + +L K +H I G++ + +N L+ Y++ G L
Sbjct: 369 NQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 427
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
++ VF M + KD VSWNSM+ Y Q+ EA++LF+ M+ + D T +L+
Sbjct: 428 ASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMS 485
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T L DL G + H L K GF+ N + + L+D+YAKC G+M D +KVFE + D++ W
Sbjct: 486 TQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC-GEMGDSLKVFENMKARDIITW 544
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTI 360
NT+I+ E+ + L ++ G PD + + ++ CS L+ GK+IH
Sbjct: 545 NTIIASCVHSED-CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIF 603
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ + S+ + V N L+ MYSKCG+L ++ ++F M + V+ ++I+ +G G +A+
Sbjct: 604 KLGLESD-VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAV 662
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
R F M I P ++ FV+++ AC+H+G V EG YF MK + EP EHY+C++DL
Sbjct: 663 RAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL 722
Query: 481 LGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPY 523
L R+ L AE I +MP P S IA + + ++L P + Y
Sbjct: 723 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYY 782
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+++N+YAA GKW++V +IR+ ++ RG++K PG SW+E++ +++VF +E++
Sbjct: 783 VLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVN 842
Query: 584 NYLEEMSRKMKQAGYVP----------DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVM 631
L ++ M + GY+ + EKR L HSE+LA+AFGLL+T G P+ VM
Sbjct: 843 KLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVM 902
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH K+IS I RE+ VRD RFH FKDG CSCGDYW
Sbjct: 903 KNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 275/580 (47%), Gaps = 69/580 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ C G D KS+H L Y+ N I +Y + FN
Sbjct: 176 TFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCR----------FND- 224
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++F+++P D+VS+N+LIS Y G AL ++
Sbjct: 225 --------------------LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 264
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSR- 176
R D +T+S ++ A L +++ +H L G VNN LL+ Y +
Sbjct: 265 RFRNLGVVPDSYTMSSVLRA-CGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
NG +D +R+F +M ++D VSWN+M+ Y Q E+++LF EMV+ Q D+ T+ S
Sbjct: 324 NGLID-GRRIFDKM-VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITS 380
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
IL A L DL G H ++I SG+ ++ + LI++YAKC G++ +VF +
Sbjct: 381 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC-GNLLASQEVFSGMKCK 439
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D V WN+MI+ Y Q + D+A+ FK + + PD ++V ++S + L LGK++
Sbjct: 440 DSVSWNSMINVYIQNGSF-DEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLXLGKEL 497
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H K+ SN I V+N LV MY+KCG + D+ ++F+ M + ++ N++IA
Sbjct: 498 HCDLAKMGFNSN-IVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED 556
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
LR+ M + P T +S+L C+ +G++ + + G E + +
Sbjct: 557 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLESDVPVGN 615
Query: 476 CMIDLLGRAGKLTDAERLIEAMP----------------FNPGSIALKAANHFLQLEPSN 519
+I++ + G L ++ ++ + M + G A++A F ++E +
Sbjct: 616 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA---FGEMEAAG 672
Query: 520 AVP--YVMLANIYAA--SGKWEE-VATIRRLMRDRGVQKK 554
VP +A I+A SG EE + R+ +D ++ +
Sbjct: 673 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPR 712
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 199/409 (48%), Gaps = 24/409 (5%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
AS+ + +LH L I G H + L+ Y+ + VF + W
Sbjct: 83 ASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXW 142
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ A + EAL L+ E ++L D YT S++ A L D H ++
Sbjct: 143 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLX 202
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +IG+ LID+Y + + D+ KVFEE+P D+V WN++ISGY+ Y ++AL
Sbjct: 203 MGFGSDLYIGNALIDMYCRFN-DLDKARKVFEEMPLRDVVSWNSLISGYNANG-YWNEAL 260
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ + +G PD + V+ AC L S G IH L KI I+ + I VNN L++M
Sbjct: 261 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI-VNNGLLSM 319
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K L D RR+FD+M + VS N+MI GY+Q G+ E+++LF M+ P +T
Sbjct: 320 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTI 378
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
S+L AC H G + G KY G+E + + +I++ + G L ++ + M
Sbjct: 379 TSILQACGHLGDLEFG-KYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM- 436
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ ++V + + N+Y +G ++E + ++M+
Sbjct: 437 -----------------KCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK 468
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 6/266 (2%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-E 292
+SI A S + H+ +I G H + + LI YA D VF
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFR-DPTSSFSVFRLA 133
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
P ++ WN++I + +S +AL + + R+ PD +F VI+AC+ L +
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFS-EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 192
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
K IH + + S+ + + NAL+ MY + +L+ AR++F+ MP + VS NS+I+GY
Sbjct: 193 AKSIHDRVLXMGFGSD-LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 251
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G EAL ++ + P + T SVL AC G V EG +++ + G + +
Sbjct: 252 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI-GIKKDV 310
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++ + + L D R+ + M
Sbjct: 311 IVNNGLLSMYCKFNGLIDGRRIFDKM 336
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 33/205 (16%)
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD-RMPEHNTVSLNSMIAGYAQ 412
++H+L I + + + I + L+A Y+ + + +F P +N NS+I
Sbjct: 93 KLHSLIITLGLHHSVI-FSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTH 151
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM------FG 466
+G+ EAL L+ + P TF SV++ACA G F M K + G
Sbjct: 152 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------GLLDFEMAKSIHDRVLXMG 204
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
F + + +ID+ R L A ++ E MP + V + L
Sbjct: 205 FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR------------------DVVSWNSL 246
Query: 527 ANIYAASGKWEEVATIRRLMRDRGV 551
+ Y A+G W E I R+ GV
Sbjct: 247 ISGYNANGYWNEALEIYYRFRNLGV 271
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 373/646 (57%), Gaps = 59/646 (9%)
Query: 82 ASARQLFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
A+ R +F + + + + S+N++I+ +A GD+ AL F MR+ + T I +
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 141 SSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S+ +LC KQ+H A G+ V ++L+ YS+ G+L++A+++F E+ E ++ VS
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPE-RNVVS 154
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQ-----------LGLDMYTLASILTA-----FT 242
W SM+ Y Q+ EA+ LF+E + + +G+D L +++A
Sbjct: 155 WTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVK 214
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
S+ + V GL +K GF +G+ L+D YAKC G++ KVF+ + + D+ WN
Sbjct: 215 SVTECVHGLA-----VKKGFEGCLAVGNTLMDAYAKC-GEISVSRKVFDGMEETDVCSWN 268
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
++I+ Y+Q S +A F + + G + + V+ AC++ +GK IH +
Sbjct: 269 SLIAVYAQNG-LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVV 327
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+E+ N + V ++V MY KCG +E AR+ FDR+ N S M+AGY HG G EA+
Sbjct: 328 KMELEDNLV-VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAM 386
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
++F M+ I P ITFVSVL+AC+H G + EG +F+ MK F EP EHYSCM+DL
Sbjct: 387 KVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDL 446
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPY 523
LGRAG L +A LI+ M P I +A +L+PSN Y
Sbjct: 447 LGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYY 506
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+NIYA +G+W++V +R LM++ G+ K PG+S +E K ++HVF+ D HP ++I+
Sbjct: 507 VLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIY 566
Query: 584 NYLEEMSRKMKQAGYVPD----------KEKRLVH--HSEKLAVAFGLLSTSYGEPILVM 631
YL+E++ K+++ GY+P+ +EK +V HSEKLAVAFG++++ G I ++
Sbjct: 567 EYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQII 626
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLRICGDCH AIK IS I REI +RD+ RFH FKDG CSCGDYW
Sbjct: 627 KNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 29/253 (11%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM---REK 125
N L+ AYA+ I+ +R++FD + + D+ S+N+LI+ YA G + A SLF DM E
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
R++ + L A S L + K +H + + V S++ Y + G ++ A++
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F + K+ SW MV YG H G EA+++F EM+ + + T S+L A +
Sbjct: 357 AFDRLKR-KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS--- 412
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIG------------SGLIDLYAKCSGDMRDCMKVFEEI 293
HA L+K G+H + + S ++DL + +G +++ + +E+
Sbjct: 413 --------HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGR-AGYLKEAYGLIQEM 463
Query: 294 P-QPDLVLWNTMI 305
+PD ++W +++
Sbjct: 464 KVKPDFIVWGSLL 476
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H +K + + + + +Y KCG + A AF++
Sbjct: 302 TLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRL 361
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ NV S+ V++A Y A ++F ++ +P+ +++ ++++A + G +
Sbjct: 362 KRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGW 421
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+ + FD + G +HY+ + + L R
Sbjct: 422 HWFNKMKCE-FDVEP---------------------------GIEHYSCMVDLL----GR 449
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G+L EA + EM D + W S++ A H+
Sbjct: 450 AGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHK 483
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/768 (34%), Positives = 392/768 (51%), Gaps = 117/768 (15%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L+T LHA P +L+ I LY+ L AA F S L+AA
Sbjct: 47 LLTSALLHA-------PPHPHLTLRLIHLYTLSRDLPAAATLF--CADPCPVSATSLVAA 97
Query: 75 YARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDG 131
YA R+ +A FD +P + D V +N +ISAYA A+++F+ + D
Sbjct: 98 YAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDD 157
Query: 132 FTLSGLITASSN--NLCL--IKQLHCLAIYCGFDHYASVNNSLLTCY------------- 174
++ + L++A + N+ + QLHC + G SV N+L+ Y
Sbjct: 158 YSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDAR 217
Query: 175 ---------------------SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
R G + A+ VF E+ + K +V WN+M+ Y +
Sbjct: 218 KVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEV-DGKFDVVWNAMISGYVHSGMAV 276
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK--SGFHQNS--HIG 269
EA +LF+ MV ++ LD +T S+L+A ++ G H +I+ F + +
Sbjct: 277 EAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVN 336
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK----------EE------ 313
+ L+ Y+KC G++ ++F+ + D+V WNT++SGY + EE
Sbjct: 337 NALVTFYSKC-GNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNE 395
Query: 314 --------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+++ AL F K+ P D ++ I+AC L GKQ+H
Sbjct: 396 LSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGH 455
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+++ + S NAL+ MY++CG +++A +F MP ++VS N+MI+ QHG G E
Sbjct: 456 IVQLGFEGSN-SAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGRE 514
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF+ M+ I P I+F++VL+AC H+G V EG +YF MK FG P +HY+ +I
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLI 574
Query: 479 DLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAV 521
DLLGRAG++ +A LI+ MPF P G + L AA+ ++ P +
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG 634
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
Y++L+N Y+A+G W + A +R+LMRDRGV+K+PG SWIE ++HVF+ D HP E
Sbjct: 635 TYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHE 694
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
++ +LE + KM++ GYVPD KE L HSE+LAV FGLL+ G +
Sbjct: 695 VYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVT 754
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLRIC DCH AI F+S GREI VRD RFH FKDG CSCG+YW
Sbjct: 755 VLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 12/316 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK---NLVPFSAY-LSNHFILLYSKCGCLSAAHHA 56
TF VL C GKS+H ++ N VP +A ++N + YSKCG ++ A
Sbjct: 296 TFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRI 355
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F+ +V S+N +L+ Y + A ++F+++P + +S+ ++S Y G E AL
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCY 174
LF MR + +T +G I A L KQLH + GF+ S N+L+T Y
Sbjct: 416 KLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMY 475
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+R G + EA +F M I D VSWN+M+ A GQH G EAL+LF MV+ + D +
Sbjct: 476 ARCGAVKEAHLMFLVMPNI-DSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF 534
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFE 291
++LTA + G ++ + + G + LIDL + G+ RD +K
Sbjct: 535 LTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMP 594
Query: 292 EIPQPDLVLWNTMISG 307
P P +W ++SG
Sbjct: 595 FEPTPS--IWEAILSG 608
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/649 (37%), Positives = 374/649 (57%), Gaps = 43/649 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLFKDM 122
+V N LL YA+ + A++LF+++ + + S+N +I+AYA G E A+ L++DM
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ T + +++A SN L L+ Q +H L G + S+ N+LLT Y+R
Sbjct: 216 D---VEPSVRTFTSVLSACSN-LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKC 271
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
LD+A ++F + +D VSW++M+ A+ + EA++ + +M + + YT AS+L
Sbjct: 272 LDDAAKIFQRLPR-RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLL 330
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A S+ DL G H ++ +G+ G+ L+DLY G + + +F++I D
Sbjct: 331 ACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSY-GSLDEARSLFDQIENRDEG 389
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP-DDCSFVCVISACSNLSP-SLGKQIHA 357
LW +I GYS K+ + L ++++ P + CVISAC++L + +Q H+
Sbjct: 390 LWTVLIGGYS-KQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHS 448
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I+ + + + +LV MYS+ GNLE AR++FD+M +T++ ++IAGYA+HG
Sbjct: 449 -DIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHG 507
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
AL L++ M P+ +TF+ VL AC+H G +G++ F ++ + P HYSC+
Sbjct: 508 LALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCI 567
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNA 520
IDLL RAG+L+DAE LI AMP P + A AA +L+P +
Sbjct: 568 IDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDP 627
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N++A +G +A++R M RGV+K+ G SWIEV Q+H F D SHP +
Sbjct: 628 ASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQ 687
Query: 581 EIHNYLEEMSRKMKQAGYVP----------DKEKRLV--HHSEKLAVAFGLLSTSYGEPI 628
EI L+ +S K+K+AGYVP +KEK L+ HSEKLA+AFGL++T+ G +
Sbjct: 688 EIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTL 747
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ LRIC DCH+A+KFISAIA REI VRD+ RFH F+DG+CSCGDYW
Sbjct: 748 RIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 248/501 (49%), Gaps = 50/501 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+R L+ C +DL + + +H + + +L N + Y KCG +++A AF+
Sbjct: 30 YRDALRQC---QDLESVRQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIA 85
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLFK 120
N +S+ +L AYA+ +A L+ ++ QP+ V Y T++ A C E AL K
Sbjct: 86 RKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGA---CASIE-ALEEGK 141
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + T G L ++ NSLLT Y++ G L
Sbjct: 142 AIHSRISGTKGLKLDVIL----------------------------ENSLLTMYAKCGSL 173
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++AKR+F M + SWN+M+ AY Q EA++L+++M + + T S+L+A
Sbjct: 174 EDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSA 230
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
++L L G + HA + G + + + L+ +YA+C + D K+F+ +P+ D+V
Sbjct: 231 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKC-LDDAAKIFQRLPRRDVVS 289
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W+ MI+ +++ + + D+A+ + K+ G P+ +F V+ AC+++ G+ +H
Sbjct: 290 WSAMIAAFAETDLF-DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHD-- 346
Query: 360 IKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+I +I++ N ALV +Y+ G+L++AR LFD++ + +I GY++ G
Sbjct: 347 -QILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRT 405
Query: 418 EALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
L L+ M T +P T I + V+SACA G A+ ++ S + + G + +
Sbjct: 406 GVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDI-EADGMISDFVLATS 464
Query: 477 MIDLLGRAGKLTDAERLIEAM 497
++++ R G L A ++ + M
Sbjct: 465 LVNMYSRWGNLESARQVFDKM 485
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 195/424 (45%), Gaps = 51/424 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G+ +HAL L N + +Y++C CL A F +
Sbjct: 223 TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRL 282
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S++ ++AA+A LFD+ A+ +
Sbjct: 283 PRRDVVSWSAMIAAFAET-------DLFDE------------------------AIEFYS 311
Query: 121 DMREKRFDTDGFTLSG--LITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + + +T + L AS +L + +H + G+ +L+ Y+ G
Sbjct: 312 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG 371
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ--HREGLEALQLFQEMV-SLQLGLDMYTLA 235
LDEA+ +F ++ E +DE W ++ Y + HR G+ L+L++EM + ++ +
Sbjct: 372 SLDEARSLFDQI-ENRDEGLWTVLIGGYSKQGHRTGV--LELYREMKNTTKVPATKIIYS 428
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+++A SL Q H+ + G + + + L+++Y++ G++ +VF+++
Sbjct: 429 CVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRW-GNLESARQVFDKMSS 487
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
D + W T+I+GY++ E+ ALG +K++ G P + +F+ V+ ACS+ G Q
Sbjct: 488 RDTLAWTTLIAGYAKHGEHG-LALGLYKEMELEGAEPSELTFMVVLYACSH----AGLQE 542
Query: 356 HALTIKIEIRSN-----RISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
+ I I+S+ I+ + ++ + S+ G L DA L + MP E N V+ +S++
Sbjct: 543 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA 602
Query: 410 YAQH 413
H
Sbjct: 603 SRIH 606
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/649 (36%), Positives = 368/649 (56%), Gaps = 39/649 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF L+ YA+ + A++LF + D+V++N +I+ + G + A+ L M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201
Query: 123 REKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+E+ + T+ G++ + L K LH + FD+ V LL Y++ L
Sbjct: 202 QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCL 261
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM--YTLASIL 238
A+++F MG +++EVSW++M+ Y EAL+LF +M+ L+ +D TL S+L
Sbjct: 262 LYARKIFDVMG-VRNEVSWSAMIGGYVASDCMKEALELFDQMI-LKDAMDPTPVTLGSVL 319
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL G + H ++IK G + +G+ L+ +YAKC G + D ++ F+E+ D
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKC-GVIDDAIRFFDEMNPKDS 378
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V ++ ++SG Q + AL F+ + G PD + + V+ ACS+L+ G H
Sbjct: 379 VSFSAIVSGCVQNGNAA-VALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 437
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I ++ + + NAL+ MYSKCG + AR +F+RM H+ VS N+MI GY HG+GM
Sbjct: 438 YLIVRGFATDTL-ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF +L + P +ITF+ +LS+C+H+G V EG+ +F M F P EH CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+D+LGRAG + +A I MPF P + + + L P +
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+NIY+A+G+W++ A IR +D G++K PG SWIE+ +H FV D SH +
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 676
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ LEE+ +MK+ GY +KE+ L++HSEKLA+AFG+L+ G PI
Sbjct: 677 QINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPI 736
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LV KNLR+CGDCH AIKF++ I REITVRD RFH FK+G C+CGD+W
Sbjct: 737 LVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 235/508 (46%), Gaps = 54/508 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ +L+ C+ + L K +H +LKN + + + LY C NQ
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC----------NQ- 58
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR+LFD+IP P ++ +N +I AYA G + A+ L+
Sbjct: 59 --------------------VVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYH 98
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + +T ++ A S L + ++H A G + V +L+ Y++ G
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L EA+R+F M +D V+WN+M+ + +A+QL +M + + T+ +L
Sbjct: 159 ILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM----KVFEEIP 294
+ L G H + ++ F +G+GL+D+YAKC C+ K+F+ +
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQ-----CLLYARKIFDVMG 272
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSP-SLG 352
+ V W+ MI GY + +AL F ++ + P + V+ AC+ L+ S G
Sbjct: 273 VRNEVSWSAMIGGYV-ASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+++H IK+ + I + N L++MY+KCG ++DA R FD M ++VS +++++G Q
Sbjct: 332 RKLHCYIIKLGSVLD-ILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG---QKYFSMMKDMFGFEP 469
+G AL +F M + I P T + VL AC+H + G Y + GF
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR----GFAT 446
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + +ID+ + GK++ A + M
Sbjct: 447 DTLICNALIDMYSKCGKISFAREVFNRM 474
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C DL G+ LH +K L N + +Y+KCG
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGV----------- 362
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A + FD++ D VS++ ++S G+ ALS+F+
Sbjct: 363 --------------------IDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFR 402
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQL--HCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ D D T+ G++ A S+ L H I GF + N+L+ YS+ G
Sbjct: 403 MMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCG 462
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ VF M D VSWN+M++ YG H G+EAL LF ++++L L D T +L
Sbjct: 463 KISFAREVFNRMDR-HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521
Query: 239 TAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
++ S LV G L F A ++D+ + +G + + +P +
Sbjct: 522 SS-CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR-AGLIDEAHHFIRNMPFE 579
Query: 296 PDLVLWNTMISG 307
PD+ +W+ ++S
Sbjct: 580 PDVRIWSALLSA 591
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/710 (35%), Positives = 382/710 (53%), Gaps = 46/710 (6%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILL--YSKCGCLSAAHHAFNQTQH 62
+L TC ++L K +H+ +K + + + + I S G LS A F +
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSL 118
N F +N ++ + A + ++ +P+ ++ L+ + A G T+ +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN-NSLLTCYSRN 177
+ + ++D F + LI + N L + ++ +V+ +L+T Y+
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELG---YAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LD+A+R+F E+ ++D VSWN+M+ Y Q EAL FQEM + + T+ ++
Sbjct: 212 GCLDDARRLFEEI-PVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTV 270
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L+A L G + + G N + + LID+Y+KC GD+ +FE I + D
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKC-GDLDKARDLFEGICEKD 329
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
++ WN MI GYS Y +AL F+K+ + P+D +FV ++ AC+ L LGK IH
Sbjct: 330 IISWNVMIGGYSHMNSYK-EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIH 388
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A K + S+ +L+ MY+KCGN+E A+++F M + S N+MI+G A HG
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
AL LF M + P +ITFV VLSAC+H G V G++ FS M + + P+ +HY C
Sbjct: 449 NMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGC 508
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSN 519
MIDLLGRAG +AE L++ M P G++ L AA H +LEP N
Sbjct: 509 MIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPEN 568
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+L+NIYA +G+W++VA IR + D+G++K PG S IEV +H F+ D H
Sbjct: 569 PGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQS 628
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
++I+ L+E+ + +++AG+VPD KE L HHSEKLA+AFGL+ST
Sbjct: 629 QDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETT 688
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLR+CG+CH+AIK IS I REI RD RFH FKDG CSC DYW
Sbjct: 689 IRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 42/298 (14%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFE 291
TL S +F +L+ Q H+ +IK+G H S LI+ A G++ + +FE
Sbjct: 37 TLLSTCKSFQNLK------QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFE 90
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
I QP+ +WNTMI G S A+ + ++ G P+ +F ++ +C+ + +
Sbjct: 91 SIEQPNQFIWNTMIRGNSLSSSPVG-AIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149
Query: 352 -GKQIHALTIKIEIRSNRISVNNALVAMYSKCGN-------------------------- 384
GKQIH +K+ + S+ V+ +L+ MY++ G
Sbjct: 150 EGKQIHGHVLKLGLESDPF-VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGY 208
Query: 385 -----LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
L+DARRLF+ +P + VS N+MIAGYAQ G EAL F+ M N+ P T V
Sbjct: 209 TLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMV 268
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+VLSACA +G + G S ++D G + +ID+ + G L A L E +
Sbjct: 269 TVLSACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/646 (36%), Positives = 365/646 (56%), Gaps = 38/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V N LL+ Y + + R++FD++ D VS+NT+I Y+ G E ++ LF +M
Sbjct: 250 DVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV 309
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F D T++ ++ A + +L K +H I G++ + +N L+ Y++ G L
Sbjct: 310 NQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 368
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
++ VF M + KD VSWNSM+ Y Q+ EA++LF+ M+ + D T +L+
Sbjct: 369 ASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMS 426
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T L DL G + H L K GF+ N + + L+D+YAKC G+M D +KVFE + D++ W
Sbjct: 427 TQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC-GEMGDSLKVFENMKARDIITW 485
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTI 360
NT+I+ E+ + L ++ G PD + + ++ CS L+ GK+IH
Sbjct: 486 NTIIASCVHSED-CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIF 544
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ + S+ + V N L+ MYSKCG+L ++ ++F M + V+ ++I+ +G G +A+
Sbjct: 545 KLGLESD-VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAV 603
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
R F M I P ++ FV+++ AC+H+G V EG YF MK + EP EHY+C++DL
Sbjct: 604 RAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL 663
Query: 481 LGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPY 523
L R+ L AE I +MP P S IA + + ++L P + Y
Sbjct: 664 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYY 723
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+++NIYAA GKW++V +IR+ ++ RG++K PG SW+E++ +++VF +E++
Sbjct: 724 VLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVN 783
Query: 584 NYLEEMSRKMKQAGYVP----------DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVM 631
L ++ M + GY+ + EKR L HSE+LA+AFGLL+T G P+ VM
Sbjct: 784 KLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVM 843
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH K+IS I RE+ VRD RFH FKDG CSCGDYW
Sbjct: 844 KNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 275/580 (47%), Gaps = 69/580 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ C G D KS+H L Y+ N I +Y + FN
Sbjct: 117 TFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCR----------FND- 165
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++F+++P D+VS+N+LIS Y G AL ++
Sbjct: 166 --------------------LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY 205
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSR- 176
R D +T+S ++ A L +++ +H L G VNN LL+ Y +
Sbjct: 206 RFRNLGVVPDSYTMSSVLRA-CGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 264
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
NG +D +R+F +M ++D VSWN+M+ Y Q E+++LF EMV+ Q D+ T+ S
Sbjct: 265 NGLID-GRRIFDKM-VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITS 321
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
IL A L DL G H ++I SG+ ++ + LI++YAKC G++ +VF +
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC-GNLLASQEVFSGMKCK 380
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D V WN+MI+ Y Q + D+A+ FK + + PD ++V ++S + L LGK++
Sbjct: 381 DSVSWNSMINVYIQNGSF-DEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLHLGKEL 438
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H K+ SN I V+N LV MY+KCG + D+ ++F+ M + ++ N++IA
Sbjct: 439 HCDLAKMGFNSN-IVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED 497
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
LR+ M + P T +S+L C+ +G++ + + G E + +
Sbjct: 498 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLESDVPVGN 556
Query: 476 CMIDLLGRAGKLTDAERLIEAMP----------------FNPGSIALKAANHFLQLEPSN 519
+I++ + G L ++ ++ + M + G A++A F ++E +
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA---FGEMEAAG 613
Query: 520 AVP--YVMLANIYAA--SGKWEE-VATIRRLMRDRGVQKK 554
VP +A I+A SG EE + R+ +D ++ +
Sbjct: 614 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPR 653
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 199/409 (48%), Gaps = 24/409 (5%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
AS+ + +LH L I G H + L+ Y+ + VF + W
Sbjct: 24 ASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLW 83
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ A + EAL L+ E ++L D YT S++ A L D H ++
Sbjct: 84 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +IG+ LID+Y + + D+ KVFEE+P D+V WN++ISGY+ Y ++AL
Sbjct: 144 MGFGSDLYIGNALIDMYCRFN-DLDKARKVFEEMPLRDVVSWNSLISGYNANG-YWNEAL 201
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ + +G PD + V+ AC L S G IH L KI I+ + I VNN L++M
Sbjct: 202 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI-VNNGLLSM 260
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K L D RR+FD+M + VS N+MI GY+Q G+ E+++LF M+ P +T
Sbjct: 261 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTI 319
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
S+L AC H G + G KY G+E + + +I++ + G L ++ + M
Sbjct: 320 TSILQACGHLGDLEFG-KYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM- 377
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ ++V + + N+Y +G ++E + ++M+
Sbjct: 378 -----------------KCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK 409
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 23/200 (11%)
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM--PEHNTVSLNSMIAGYA 411
++H+L I + + + I + L+A Y+ + + +F R+ P +N NS+I
Sbjct: 34 KLHSLIITLGLHHSVI-FSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSIIRALT 91
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G+ EAL L+ + P TF SV++ACA + + DM GF +
Sbjct: 92 HNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDM-GFGSDL 150
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
+ +ID+ R L A ++ E MP + V + L + Y
Sbjct: 151 YIGNALIDMYCRFNDLDKARKVFEEMPLR------------------DVVSWNSLISGYN 192
Query: 532 ASGKWEEVATIRRLMRDRGV 551
A+G W E I R+ GV
Sbjct: 193 ANGYWNEALEIYYRFRNLGV 212
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 353/641 (55%), Gaps = 73/641 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AY+ Q + AR +FD+ + ++V +N +I +Y + ALS+F+ M F+ D
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S +NL + Q+H + G D + N+L+ Y + G L EA++V
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI--LTAFTSLED 246
+M +D VSWNSMV Y Q + +AL++ +EM SL L D T+AS+ + +TSLE+
Sbjct: 197 QM-PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN 255
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ Q H +FE + + +L+ WN MI+
Sbjct: 256 V----------------QYIH--------------------NMFERMTKKNLISWNVMIA 279
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIR 365
Y ++A+ F ++ G PD + ++ AC +LS LG+++H K +R
Sbjct: 280 IYVNNS-MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLR 338
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + NAL+ MY+KCG LE+AR +FD+M + VS SM++ Y + G G +A+ LF
Sbjct: 339 PNLL-LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML++ P +I FVSVLSAC+HTG + +G+ YF MM + +G P EH++CM+DL GRAG
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
++ +A I+ MP P I L AA+ QL P + YV+L+N
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G W++V +R M+ G++K PG S +E+ Q+H F+A D HP K I+ L+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ KMK+ GY+P DKE L HSEKLA+ F +L+T G PI + KNLR+
Sbjct: 578 LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRV 637
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH AIK IS I R I VRD RFH F +G CSCGDYW
Sbjct: 638 CGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 161/348 (46%), Gaps = 43/348 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G +L G +H +K + + ++ N + +Y KCGCL A +Q
Sbjct: 139 TFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 61 QHANVFSFNVLLAAYARQLRIASARQ---------------------------------- 86
+ +V S+N ++A YA+ + A +
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQY 258
Query: 87 ---LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+F+++ + +L+S+N +I+ Y + A+SLF M E D T++ L+ A +
Sbjct: 259 IHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGD 318
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L ++LH + N+LL Y++ G L+EA+ VF +M ++D VSW S
Sbjct: 319 LSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM-RLRDVVSWTS 377
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS- 260
M+ AYG+ +G +A+ LF +M+ D S+L+A + L G + + +
Sbjct: 378 MMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQY 437
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
G + ++DL+ + +G++ + +++P +P+ +W ++S
Sbjct: 438 GIVPRIEHFACMVDLFGR-AGEVEEAYSFIKQMPMEPNERVWGALLSA 484
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 47/239 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T +L C L G+ LH K NL P + L N + +Y+KCGCL
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRP-NLLLENALLDMYAKCGCLE-------- 358
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
AR +FD++ D+VS+ +++SAY G A++LF
Sbjct: 359 -----------------------EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALF 395
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLT 172
M + + D +++A S+ L + H I +H+A ++
Sbjct: 396 AKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA----CMVD 451
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLG 228
+ R G ++EA +M +E W +++ A H + GL A L ++ Q G
Sbjct: 452 LFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSG 510
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 265/782 (33%), Positives = 395/782 (50%), Gaps = 117/782 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F + L+ C+ R L+T LHA P +L+ I LY+ L+ F
Sbjct: 39 SFLRALR-CLHAR-LLTADLLHA-------PSHPHLTLRLIHLYTLSPDLATPAALFRSD 89
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSL 118
+ L+AA+A R+ A FD +P + D V +N ++SA+A A+S+
Sbjct: 90 PDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 149
Query: 119 FKDM-REKRFDTDGFTLSGLITASS--NNLCL--IKQLHCLAIYCGFDHYASVNNSLLTC 173
F + D ++ + LI+A +NL QLHC + G SV+N+L+
Sbjct: 150 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 209
Query: 174 Y----------------------------------SRNGFLDEAKRVFYEMGEIKDEVSW 199
Y R G ++ A+ VF E+ + K +V W
Sbjct: 210 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEV-DGKFDVVW 268
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
N+M+ Y Q +A +LF+ MVS ++ LD +T S+L+A + V G H +I+
Sbjct: 269 NAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 328
Query: 260 --SGFHQNS--HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY------- 308
F + + + L+ LY+K G + ++F+ + D+V WNT++SGY
Sbjct: 329 LQPNFVPEAALPVNNALVTLYSK-GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLD 387
Query: 309 ---------SQKEEYS--------------DQALGCFKKLNRVGYHPDDCSFVCVISACS 345
K + S + AL F ++ P D ++ I+AC
Sbjct: 388 KAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACG 447
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L G+Q+HA ++ ++ S NAL+ MY+KCG + DAR +F MP ++VS N
Sbjct: 448 ELGALKHGRQLHAHLVQCGFEASN-SAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 506
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI+ QHG G EAL LF+ M+ I P I+F+++L+AC H G V EG YF MK
Sbjct: 507 AMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD 566
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALK 507
FG P +HY+ +IDLLGR+G++ +A LI+ MPF P
Sbjct: 567 FGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAY 626
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA+ ++ P + Y++L+N Y+A+G+W + A +R+LMRDRGV+K+PG SWIEV ++H
Sbjct: 627 AADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIH 686
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
VF+ D HP +E++ +LE + +M++ GYVPD KE L HSEKLAV
Sbjct: 687 VFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAV 746
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
FGLL G + V+KNLRICGDCH A+ F+S GREI VRD RFH FKDG CSCG+
Sbjct: 747 GFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 806
Query: 676 YW 677
YW
Sbjct: 807 YW 808
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/506 (42%), Positives = 304/506 (60%), Gaps = 33/506 (6%)
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Y +G +AL+LF + D TLA+ A L L G Q HAH IK+G
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
F + H+ SG++D+Y KC GDM + VF I PD V W +MISG DQAL
Sbjct: 61 FDSDLHVNSGILDMYIKC-GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGN-EDQALRI 118
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ ++ + PD+ +F +I A S ++ G+Q+HA IK++ S+ V +LV MY+
Sbjct: 119 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF-VGTSLVDMYA 177
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCGN+EDA RLF +M N N+M+ G AQHG EA+ LF+ M I P ++F+
Sbjct: 178 KCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIG 237
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
+LSAC+H G +E +Y M + +G EPE EHYSC++D LGRAG + +A+++IE MPF
Sbjct: 238 ILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 297
Query: 501 PGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
+ +A A LEP ++ YV+L+NIYAA+ +W++V R
Sbjct: 298 ASASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDAR 357
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-- 601
++M+ + V+K PGFSWI+VK +H+FV +D SHP I++ +EEM + +++ GYVPD
Sbjct: 358 KMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTE 417
Query: 602 ----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
KE+ L +HSEKLA+A+GL+ST I V+KNLR+CGDCHNAIK+IS +
Sbjct: 418 FVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVF 477
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD RFH F+DG CSCGDYW
Sbjct: 478 EREIVLRDANRFHHFRDGVCSCGDYW 503
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 16/231 (6%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSK--CGCLSAAHHAFNQTQHANVFSFNV-------LLA 73
AL L +L+ S S+ L + CGCL HA F+ +L
Sbjct: 14 ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 73
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
Y + + +A +F+ I PD V++ ++IS D G+ + AL ++ MR+ R D +T
Sbjct: 74 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 133
Query: 134 LSGLITASSNNLCLI--KQLHC--LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
+ LI ASS L +QLH + + C D + V SL+ Y++ G +++A R+F +
Sbjct: 134 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPF--VGTSLVDMYAKCGNIEDAYRLFKK 191
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
M +++ WN+M+V QH EA+ LF+ M S + D + IL+A
Sbjct: 192 MN-VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 241
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 4/190 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K L G+ LHA +K ++ + +Y+KCG + A+ F +
Sbjct: 133 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N +L A+ A LF + +PD VS+ ++SA + G T A
Sbjct: 193 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 252
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + + L+++ + F AS+N +LL
Sbjct: 253 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRI 312
Query: 177 NGFLDEAKRV 186
G ++ KRV
Sbjct: 313 QGDVEXGKRV 322
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/627 (37%), Positives = 358/627 (57%), Gaps = 39/627 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
NVLL +Y R+ A LF++I D V++NTLI+ Y G A+ LF MR+
Sbjct: 182 NVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHK 241
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT SG++ A ++ L +QLH L++ GF ASV N +L YS++ + E + +
Sbjct: 242 PSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNL 301
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E+ D VS+N ++ +Y Q + E+L LF+EM + + A++L+ +L
Sbjct: 302 FNEMPEL-DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSS 360
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQPDLVLWNTMI 305
L G Q H I + H+G+ L+D+YAKC +M D + +F+ + Q V W +I
Sbjct: 361 LQVGRQVHCQAIVATADSILHVGNSLVDMYAKC--EMFDEAELIFKSLSQRSTVSWTALI 418
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEI 364
SGY QK + L F K+ D +F V+ A + S LGKQ+HA I+
Sbjct: 419 SGYVQKGLHG-AGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGN 477
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
N S + LV MY+KCG+++DA ++F+ MP+ N VS N++I+ YA +G G A+ F
Sbjct: 478 LENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFT 536
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M+++ + P +++ + VL AC+H G V +G ++F M ++G P+ +HY+CM+DLLGR
Sbjct: 537 KMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRN 596
Query: 485 GKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP-SNAVPYVML 526
G+ +AE+L++ MPF P S+A +AA +E +A YV +
Sbjct: 597 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSM 656
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
+NIYAA+GKWE V +++ MR+RG++K P +SW+EV ++HVF + D +HP EI +
Sbjct: 657 SNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKI 716
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
E++ ++++ GY PD K + L +HSE+LAVAF L+ST G PI+VMKNL
Sbjct: 717 NELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNL 776
Query: 635 RICGDCHNAIKFISAIAGREITVRDTY 661
R C DCH AIK IS I R IT + +
Sbjct: 777 RACRDCHAAIKLISKIVKRVITTQPGF 803
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 252/512 (49%), Gaps = 32/512 (6%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G +SAA +++ H N S N +++ Y + ++SAR LFD +P +V++ L+ YA
Sbjct: 58 GQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYA 117
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDH--Y 163
+ A LF+ M D T + L+ ++ + + Q+H A+ GFD +
Sbjct: 118 GNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLF 177
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQE 221
+V N LL Y LD A +F E+ + KD V++N+++ Y ++GL EA+ LF +
Sbjct: 178 LTVCNVLLKSYCEVRRLDLACVLFEEILD-KDSVTFNTLITGY--EKDGLYTEAIHLFLK 234
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M +T + +L A L D G Q H + +GF +++ +G+ ++ Y+K
Sbjct: 235 MRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSK-HD 293
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
+ + +F E+P+ D V +N +IS YSQ E+Y +++L F+++ +G+ + F ++
Sbjct: 294 RVLETRNLFNEMPELDFVSYNVVISSYSQAEQY-EESLNLFREMQCMGFDRRNFPFATML 352
Query: 342 SACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
S +NLS +G+Q+H I + + + V N+LV MY+KC ++A +F + + +T
Sbjct: 353 SIAANLSSLQVGRQVHCQAI-VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRST 411
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
VS ++I+GY Q G+ L+LF M N+ TF +VL A A + G++ +
Sbjct: 412 VSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAF 471
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
+ E S ++D+ + G + DA ++ E MP NA
Sbjct: 472 IIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP------------------DRNA 512
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
V + L + YA +G E M G+Q
Sbjct: 513 VSWNALISAYADNGDGEAAIGAFTKMIQSGLQ 544
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 162/401 (40%), Gaps = 99/401 (24%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK G L+ GK LHA +++ G L
Sbjct: 448 TFATVLKASAGFASLLLGKQLHAFIIRS-------------------GNLE--------- 479
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFS + L+ YA+ I A Q+F+++P + VS+N LISAYAD GD E+A+ F
Sbjct: 480 ---NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFT 536
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN------------N 168
M + D ++ G++ A S HC + G + + +++
Sbjct: 537 KMIQSGLQPDSVSILGVLIACS---------HCGFVEQGTEFFQAMSPIYGITPKKKHYA 587
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
+L RNG EA+++ EM DE+ W+S++ A ++ A + +++ S++
Sbjct: 588 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKL 647
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
D A+ + +++ G + H+ K+ MR+ +
Sbjct: 648 RD----AAAYVSMSNIYAAAGKWENVRHVKKA----------------------MRE--R 679
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-------RVGYHPDDCSFVCVI 341
+++P V N I +S ++ KK+N R GY PD S V
Sbjct: 680 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVV--- 736
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
+ +Q+ ++K S R++V AL++ C
Sbjct: 737 -------QDIDEQMKIESLKYH--SERLAVAFALISTPEGC 768
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/744 (33%), Positives = 381/744 (51%), Gaps = 102/744 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C +DL +GK++H LK+ + + ++SN + LY C C
Sbjct: 244 TVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLC----------- 292
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A+ +FD +P +++++N+L S Y +CG + L++F+
Sbjct: 293 --------------------VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFR 332
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M D +S ++ A S +L K +H A+ G V +L+ Y+
Sbjct: 333 EMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCL 392
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EA+ VF M ++ V+WNS+ Y + L +F+EMV + D+ T+ SIL
Sbjct: 393 CVREAQTVFDLMPH-RNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSIL 451
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L+DL G H ++ G ++ + + L+ LYAKC +R+ VF+ IP ++
Sbjct: 452 HACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVC-VREAQVVFDLIPHREV 510
Query: 299 VLWNTMISGYSQKEEYS----------------------------------DQALGCFKK 324
WN +++ Y +EY ++A+ F+K
Sbjct: 511 ASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRK 570
Query: 325 LNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
+ +G+ PD+ + ++ ACS LS L GK+IH + + ++ NALV MY+KC
Sbjct: 571 MQTMGFKPDETTIYSILRACS-LSECLRMGKEIHCYVFR-HWKDWDLARTNALVDMYAKC 628
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G L +R +FD MP + S N+MI HG G EAL LFE ML + + P + TF VL
Sbjct: 629 GGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVL 688
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
SAC+H+ V EG + F+ M EPE EHY+C++D+ RAG L +A I+ MP P
Sbjct: 689 SACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPT 748
Query: 503 SIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+IA KA A +++P+ + YV L NI + W E + IR+L
Sbjct: 749 AIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKL 808
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---- 601
M++RG+ K PG SW V ++H FVA D S+ +I+N+L+E+ K+K AGY PD
Sbjct: 809 MKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYV 868
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
K + L +HSEKLAVAFG+L+ + I V KNLRICGDCHNAIK++S + G
Sbjct: 869 LHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGV 928
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
I VRD+ RFH FK+G CSC D+W
Sbjct: 929 TIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 239/497 (48%), Gaps = 45/497 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C +DL +GK +H +++ + ++S+ F+ Y+KC C
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC----------- 191
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A+ +FD +P D+V++N+L S Y +CG + L++F+
Sbjct: 192 --------------------VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFR 231
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M D T+S +++A S+ +L K +H A+ G V+N+L+ Y
Sbjct: 232 EMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCL 291
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EA+ VF M ++ ++WNS+ Y + L +F+EM + D ++SIL
Sbjct: 292 CVREAQAVFDLMPH-RNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSIL 350
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L+DL G H +K G ++ + + L++LYA C +R+ VF+ +P ++
Sbjct: 351 PACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLC-VREAQTVFDLMPHRNV 409
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN++ S Y + + L F+++ G PD + + ++ ACS+L GK IH
Sbjct: 410 VTWNSLSSCYVNC-GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHG 468
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + V NAL+++Y+KC + +A+ +FD +P S N ++ Y +
Sbjct: 469 FAVRHGMVED-VFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYE 527
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP-EGEHYSC 476
+ L +F M + IT+ V+ C ++ E + F M+ M GF+P E YS
Sbjct: 528 KGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTM-GFKPDETTIYSI 586
Query: 477 MIDLLGRAGKLTDAERL 493
+ RA L++ R+
Sbjct: 587 L-----RACSLSECLRM 598
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 222/474 (46%), Gaps = 44/474 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F V K C RD + K H + V + N FI Y KC C
Sbjct: 42 VFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKC----------- 90
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + D+V++N+L + Y +CG + L++F+
Sbjct: 91 --------------------VEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFR 130
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + T+S ++ S+ +L K++H + G V+++ + Y++
Sbjct: 131 KMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCL 190
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EA+ VF M +D V+WNS+ Y + L +F+EMV + D T++ IL
Sbjct: 191 CVREAQTVFDLMPH-RDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCIL 249
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + L+DL G H +K G +N + + L++LY C +R+ VF+ +P ++
Sbjct: 250 SACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLC-VREAQAVFDLMPHRNV 308
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ WN++ S Y + + L F+++ G PD + ++ ACS L GK IH
Sbjct: 309 ITWNSLASCYVNCG-FPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHG 367
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + + + V ALV +Y+ C + +A+ +FD MP N V+ NS+ + Y G
Sbjct: 368 FAVKHGMVED-VFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQ 426
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEG-QKYFSMMKDMF 465
+ L +F M+ + P +T +S+L AC+ +GKV G M++D+F
Sbjct: 427 KGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVF 480
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 8/245 (3%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA++++ + + D ++ A + D + QFH + G + IG+ I
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK--LNRVGYH 331
Y KC + +VF+++ D+V WN++ + Y + Q L F+K LN+V +
Sbjct: 83 HAYGKCKC-VEGARRVFDDLVARDVVTWNSLSACYVNC-GFPQQGLNVFRKMGLNKVKAN 140
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
P S ++ CS+L GK+IH ++ + + + V++A V Y+KC + +A+
Sbjct: 141 PLTVS--SILPGCSDLQDLKSGKEIHGFVVRHGMVED-VFVSSAFVNFYAKCLCVREAQT 197
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FD MP + V+ NS+ + Y G + L +F M+ + P +T +LSAC+
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 451 VAEGQ 455
+ G+
Sbjct: 258 LKSGK 262
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 23/242 (9%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG-KQIHALTIKIEIRSNRISVNNA 374
++A+ + G PD F+ V AC+ +L KQ H + + S+ +S+ NA
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSD-VSIGNA 80
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
+ Y KC +E ARR+FD + + V+ NS+ A Y G + L +F M +
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKAN 140
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+T S+L C+ + G K++ GF + R G + D
Sbjct: 141 PLTVSSILPGCSDLQDLKSG-------KEIHGF-------------VVRHGMVEDVFVSS 180
Query: 495 EAMPFNPGSIALKAANHFLQLEP-SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
+ F + ++ A L P + V + L++ Y G ++ + R M GV+
Sbjct: 181 AFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKP 240
Query: 554 KP 555
P
Sbjct: 241 DP 242
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/651 (36%), Positives = 367/651 (56%), Gaps = 46/651 (7%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ VF N L+ YA+ + AR +F ++ D+VS+NTL++ G AL LF D
Sbjct: 190 STVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDS 249
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R T S +I +N +L L +QLH + GF Y +V +L+ Y++ G L
Sbjct: 250 RSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQL 309
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D+A VF M ++ VSW +M+ Q+ + A LF M + + T ++ILT
Sbjct: 310 DKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT- 368
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK-CSGDMRDCMKVFEEIPQPDLV 299
+ + Q HA +IK+ + +G+ L+ Y+K CS + + + +F+ I Q D+V
Sbjct: 369 ---VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTE--EALSIFKMIDQKDVV 423
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS----LGKQI 355
W+ M++ Y+Q + + A F K+ G P++ + I AC+ SP+ LG+Q
Sbjct: 424 SWSAMLTCYAQAGD-CNGATNAFIKMTMHGLKPNEFTISSAIDACA--SPAAGVDLGRQF 480
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA++IK + + V++ALV+MY++ G++E+A+ +F+R + + +S NSM++GYAQHG
Sbjct: 481 HAISIKHRCH-DALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGY 539
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
+AL +F M I +TF+SV+ CAH G V EGQ+YF +M +G P +HY+
Sbjct: 540 SQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYA 599
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPS 518
CM+DL RAGKL + LIE MPF G + AA L LEP
Sbjct: 600 CMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPL 659
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ YV+L+NIY+A+GKW+E +R+LM + V+K+ G SWI++K ++H F+A D SHP+
Sbjct: 660 DSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPL 719
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
++I+ L M+ K+KQ GY PD KE L HSE+LA+AFGL++T
Sbjct: 720 SEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAA 779
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ + KNLR+ GD H +K +S I REI +RD RFH FK G CSCGD+W
Sbjct: 780 PLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 202/445 (45%), Gaps = 40/445 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
++K C D V GK LHAL C+ H H +
Sbjct: 61 IIKICGSVPDRVLGKQLHAL------------------------CVRCGH------DHGD 90
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ L+ Y + R++F+ + + ++V++ +L++ Y G +SLF MR
Sbjct: 91 IRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRA 150
Query: 125 KRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + FT S +++ AS + L + +H +I G V NSL+ Y++ G ++E
Sbjct: 151 EGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF M E +D VSWN+++ + LEALQLF + S L T ++++
Sbjct: 211 ARVVFCRM-ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLW 301
+L+ L Q H+ ++K GFH ++ + L+D Y K +G + + VF + ++V W
Sbjct: 270 NLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNK-AGQLDKALDVFLLMSGSQNVVSW 328
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
MI G Q + A F ++ G P+D ++ +++ S QIHA IK
Sbjct: 329 TAMIDGCIQNGDIP-LAAALFSRMREDGVAPNDLTYSTILTVS---EASFPPQIHAQVIK 384
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+V AL+ YSK + E+A +F + + + VS ++M+ YAQ G A
Sbjct: 385 TNYECTP-TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATN 443
Query: 422 LFEWMLETNIPPTNITFVSVLSACA 446
F M + P T S + ACA
Sbjct: 444 AFIKMTMHGLKPNEFTISSAIDACA 468
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 10/340 (2%)
Query: 110 GDTESALSLFKDM-REKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHY-AS 165
G AL F D R + G L G+I S + L KQLH L + CG DH
Sbjct: 33 GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIR 92
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V SL+ Y + + ++VF M + ++ V+W S++ Y Q L+ + LF M +
Sbjct: 93 VGTSLVDMYMNWHSVLDGRKVFEGMLK-RNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAE 151
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +T +S+L+ S + G HA IK G + + L+++YAKC G + +
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKC-GLVEE 210
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF + D+V WNT+++G +AL F + ++ VI+ C+
Sbjct: 211 ARVVFCRMETRDMVSWNTLMAGLVLNGR-DLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSL 403
NL L +Q+H+ +K S +V AL+ Y+K G L+ A +F M N VS
Sbjct: 270 NLKHLGLARQLHSSVLKHGFHSYG-NVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSW 328
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+MI G Q+G A LF M E + P ++T+ ++L+
Sbjct: 329 TAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 340 VISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+I C ++ LGKQ+HAL ++ I V +LV MY ++ D R++F+ M +
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
N V+ S++ GY Q G+ ++ + LF M + P TF SVLS A G V GQ
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQ 177
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/637 (36%), Positives = 348/637 (54%), Gaps = 115/637 (18%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
+++ Y R + AR LFD++P+ DL S+N +++ Y D ++A +LF+ M E+ +
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVS- 59
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
N++L+ Y++NGF+DEA+ +FY+M
Sbjct: 60 ------------------------------------WNAMLSGYAQNGFVDEAREIFYKM 83
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+K+ +SWN ++ AY Q+ +A +LF+ + L S L+GG
Sbjct: 84 -PLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTL--------------VSWNCLMGG 128
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
+R +F+ +PQ D + W+ MI+GYSQ
Sbjct: 129 F-------------------------------VRKRRNLFDNMPQRDSISWSAMIAGYSQ 157
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
S++AL F ++ R + SF C +S CSN++ LG+Q+H +K ++
Sbjct: 158 NG-CSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWY 216
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V NAL+AMY KCG++++AR F + E + VS N+MI GYA+HG G EAL +FE M T
Sbjct: 217 -VGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTT 275
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
I P + T VSVL+AC+H G V +G +YF M +G + HY+CM+DLLGRAG+L +
Sbjct: 276 GIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEE 335
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A+ L++ MPF P + + KAA ++EP N+ Y++L+ +YAA
Sbjct: 336 AQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAA 395
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
SG+W + +R MR++GV+K PG+SW+EV+ ++H F D SHP +I+ +LEEM K
Sbjct: 396 SGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLK 455
Query: 593 MKQAGYVPD--------KEKRLVH----HSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
+KQ GY+ +E+ VH HSEKLAVA+G+L G PI V+KNLR+C DC
Sbjct: 456 LKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDC 515
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
HNAIK+IS I GR I +RD +RFH F+ G CSC D+W
Sbjct: 516 HNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 57/255 (22%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L TC L G+ LH +K Y+ N + +Y KCG + A AF +
Sbjct: 182 SFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI 241
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N ++ YAR G E AL++F+
Sbjct: 242 LEKDVVSWNTMIHGYARH-------------------------------GFGEEALTVFE 270
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS----------- 169
M+ D T+ ++ A S H + G +++ S+N
Sbjct: 271 LMKTTGIRPDDATMVSVLAACS---------HAGLVDQGSEYFYSMNRDYGITAKLVHYT 321
Query: 170 -LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSL 225
++ R G L+EA+ + M D +W +++ A +G G +A Q+ EM
Sbjct: 322 CMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPH 381
Query: 226 QLGLDMYTLASILTA 240
G MY L S L A
Sbjct: 382 NSG--MYILLSKLYA 394
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/692 (35%), Positives = 373/692 (53%), Gaps = 72/692 (10%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
H F +TQ + S +++++ Y + A LF + P ++++ ++I + D
Sbjct: 28 HAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFS 87
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLL 171
AL+ F +MR D ++ + + +L + +H + G D N+L+
Sbjct: 88 KALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALM 147
Query: 172 TCYSR-----------NGF-------------------------LDEAKRVFYEMGEIKD 195
Y++ N F +D +RVF M KD
Sbjct: 148 NMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR-KD 206
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VS+N+++ Y Q +AL++ +EM + L D +TL+S+L F+ D++ G + H
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
++I+ G + +IGS L+D+YAK S + D +VF + D + WN++++GY Q Y
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAK-SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY- 324
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
++AL F+++ P +F VI AC++L+ LGKQ+H ++ SN I + +A
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN-IFIASA 383
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV MYSKCGN++ AR++FDRM + VS ++I G+A HG G EA+ LFE M + P
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ FV+VL+AC+H G V E YF+ M ++G E EHY+ + DLLGRAGKL +A I
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 495 EAMPFNP-GSI----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
M P GS+ A K A ++ N YV++ N+YA++G+W+
Sbjct: 504 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 563
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
E+A +R MR +G++KKP SWIE+K + H FV+ D SHP + +I+ +L+ + +M++ G
Sbjct: 564 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 623
Query: 598 YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV D K + L HSE+LAVAFG+++T G I V KN+RIC DCH AIK
Sbjct: 624 YVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIK 683
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
FIS I REI VRD RFH F G CSCGDYW
Sbjct: 684 FISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 13/416 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC---GCLSAAHHAF 57
F VLK+C DL G+S+H ++ + Y N + +Y+K G + + F
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF 166
Query: 58 NQ--TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
++ + +N +V I S R++F+ +P+ D+VSYNT+I+ YA G E A
Sbjct: 167 DEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDA 226
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTC 173
L + ++M D FTLS ++ S + +I K++H I G D + +SL+
Sbjct: 227 LRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDM 286
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y+++ +++++RVF + +D +SWNS+V Y Q+ EAL+LF++MV+ ++
Sbjct: 287 YAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+S++ A L L G Q H ++++ GF N I S L+D+Y+KC G+++ K+F+ +
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC-GNIKAARKIFDRM 404
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSL 351
D V W +I G++ + +A+ F+++ R G P+ +FV V++ACS+ L
Sbjct: 405 NVLDEVSWTAIIMGHAL-HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+++T K+ + + A+ + + G LE+A +M T S+ S +
Sbjct: 464 WGYFNSMT-KVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/713 (34%), Positives = 377/713 (52%), Gaps = 78/713 (10%)
Query: 29 LVPFSAYLSNHF------ILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIA 82
L+P+ +Y S+ I +++ G + A + F+ Q V S+N ++A Y R A
Sbjct: 5 LIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPA 64
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT-----DGFTLSGL 137
A++LFD++P+ + +S+N L+S Y G A +F M E+ + G+ GL
Sbjct: 65 EAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGL 124
Query: 138 ITASSNNLCLIKQLHCLAIYCGF----------------------DHYASVNNSLLTCYS 175
I + + + + ++ D AS N ++
Sbjct: 125 IDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTN--MIGGLC 182
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G L EA+ +F EM + ++ V+W SM+ Y + + A +LF+ M + T
Sbjct: 183 SEGRLSEAREIFDEMPQ-RNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWT 237
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L +T G + A L K+ + +G+I + +G++ VF+++ +
Sbjct: 238 AMLKGYTR----SGRINEAAELFKAMPVKPVAACNGMIMGFG-LNGEVGKARWVFDQMKE 292
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
D W+ +I Y +K + +AL F + R G P+ S + ++S C +L S G+Q
Sbjct: 293 KDDGTWSALIKIYERKG-FELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQ 351
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H+ ++ + I V++ L+ MY KCG+L +R+FDR + V NS+IAGYAQHG
Sbjct: 352 VHSQLVRSHFDLD-IYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHG 410
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G +AL +F M + P ITF+ VLSAC +TGKV EG + F MK + + + EHY
Sbjct: 411 FGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHY 470
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEP 517
+CM+DLLGRAGKL +A LIE MP +I A AA LQLEP
Sbjct: 471 ACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEP 530
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV-AEDGSH 576
S+A PY++L+N+YA+ +W++VA +R+ MR R V K PG SWIEV ++H+F SH
Sbjct: 531 SSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASH 590
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSY 624
P + I LE++ +++AGY P DK L HHSEK+AVA+GLL
Sbjct: 591 PEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPV 650
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G+PI VMKNLR+CGDCH+AIK I+ + GREI +RD RFH FKDG CSC D+W
Sbjct: 651 GKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C L G+ +H+ +++ Y+S+ I +Y KCG L F++ +
Sbjct: 336 ILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKD 395
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +N ++A YA+ A ++F ++ PD +++ ++SA G + L +F+
Sbjct: 396 IVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFE 455
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M+ K + D T +HYA ++ R G L
Sbjct: 456 SMKSK-YQVDQKT---------------------------EHYA----CMVDLLGRAGKL 483
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+EA + M D + W +++ A H+
Sbjct: 484 NEAMNLIENMPVEADAIVWGALLSACRTHK 513
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/711 (34%), Positives = 387/711 (54%), Gaps = 73/711 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C + LV G+ +H K + +++ I +YS+ G
Sbjct: 177 TFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGF----------- 222
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR LFD +P D+ S+N +IS G+ AL +
Sbjct: 223 --------------------VGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 262
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR + + D T++ + + A ++ +H I G + V+N+L+ Y++ G
Sbjct: 263 EMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFG 322
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A++VF +M ++D VSWNS++ AY Q+ + + A F +M L D+ TL S+
Sbjct: 323 NLGDAQKVFQQM-FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLA 381
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSH-IGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ D H +++ G+ + IG+ ++D+YAK G + KVF IP D
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKL-GVIDSAHKVFNLIPVKD 440
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSP-SLGKQI 355
+V WNT+ISGY+Q + +A+ ++ + + ++V +++A +++ G +I
Sbjct: 441 VVSWNTLISGYTQNG-LASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRI 499
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H IK + + + V L+ +Y KCG L DA LF ++P ++V N++I+ + HG
Sbjct: 500 HGHLIKTNLHLD-VFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +AL+LF M + + P ++TF+S+LSAC+H+G V EG+ +F +M++ +G +P +HY
Sbjct: 559 GEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYG 617
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPS 518
CM+DLLGRAG L A I+ MP +P G+I L A++ +++
Sbjct: 618 CMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSE 677
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YV+L+NIYA GKWE V +R L R+RG++K PG+S IEV +++ +F + SHP
Sbjct: 678 NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPK 737
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
KEI+ L ++ KMK GY+PD KE L HSE+LA+AFG++ST
Sbjct: 738 CKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKS 797
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+CGDCHNA KFIS I REI VRD+ RFH FK+G CSCGDYW
Sbjct: 798 AIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 244/491 (49%), Gaps = 38/491 (7%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD-MREKRFDT 129
L+ YA ++ +R FDQI + D+ ++N++ISAY G A+ F + +F
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
D +T ++ A L +++HC GF V SL+ YSR GF+ A+ +F +
Sbjct: 174 DFYTFPPVLKA-CQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDD 232
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M +D SWN+M+ Q+ +AL + EM + +D T+ASIL L D+
Sbjct: 233 M-PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDIST 291
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
H ++IK G + + LI++YAK G++ D KVF+++ D+V WN++I+ Y
Sbjct: 292 ATLIHLYVIKHGLEFELFVSNALINMYAKF-GNLGDAQKVFQQMFLRDVVSWNSIIAAYE 350
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS-ACSNLSPSLGKQIHALTIKIEIRSNR 368
Q ++ A G F K+ G PD + V + S A + + +H ++
Sbjct: 351 QNDD-PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA 409
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ + NA++ MY+K G ++ A ++F+ +P + VS N++I+GY Q+G+ EA+ ++ M E
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 429 -TNIPPTNITFVSVLSACAHTGKVAEGQKYF------SMMKDMFGFEPEGEHYSCMIDLL 481
I T+VS+L+A AH G + +G + ++ D+F +C+IDL
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFV-------GTCLIDLY 522
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
G+ G+L DA L F Q+ ++VP+ + + + G E+
Sbjct: 523 GKCGRLVDAMCL------------------FYQVPRESSVPWNAIISCHGIHGHGEKALK 564
Query: 542 IRRLMRDRGVQ 552
+ R M+D GV+
Sbjct: 565 LFREMQDEGVK 575
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 24/317 (7%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
+ HA L+ SG Q++ I L++LYA GD+ F++I + D+ WN+MIS Y +
Sbjct: 94 RLHALLVVSGKIQSNFISIRLVNLYASL-GDVSLSRGTFDQIQRKDVYTWNSMISAYVRN 152
Query: 312 EEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRIS 370
+ +A+ CF +L V + D +F V+ AC L G++IH K+ + + +
Sbjct: 153 GHFR-EAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD--GRKIHCWVFKLGFQWD-VF 208
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V +L+ MYS+ G + AR LFD MP + S N+MI+G Q+G +AL + + M
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I ++T S+L CA G ++ + G E E + +I++ + G L DA
Sbjct: 269 INMDSVTVASILPVCAQLGDISTA-TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327
Query: 491 ERLIEAM-------------PFNPGSIALKAANHFLQLEPSNAVP----YVMLANIYAAS 533
+++ + M + + A F +++ + P V LA+I A S
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387
Query: 534 GKWEEVATIRRLMRDRG 550
++ ++ + RG
Sbjct: 388 RDYKNSRSVHGFIMRRG 404
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 333 DDCSFVCVISACSNLSPSLGKQIHAL-TIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
++ F + +C+ L K++HAL + +I+SN IS+ LV +Y+ G++ +R
Sbjct: 75 EEIDFNSLFDSCTK--TLLAKRLHALLVVSGKIQSNFISIR--LVNLYASLGDVSLSRGT 130
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGK 450
FD++ + + NSMI+ Y ++G EA+ F + +L T TF VL AC
Sbjct: 131 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---T 187
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ +G+K + + GF+ + + +I + R G + A L + MPF
Sbjct: 188 LVDGRKIHCWVFKL-GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPF 235
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 259/711 (36%), Positives = 376/711 (52%), Gaps = 94/711 (13%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQ--HANVFSFNVLLAAY--ARQLR------------ 80
S++ I Y++ G L A F++T H V S+N ++AAY ARQ R
Sbjct: 25 SSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR 84
Query: 81 -----------------IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++ AR++FD +P ++VS+ +++ Y GD A LF M
Sbjct: 85 NTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP 144
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
K + L GL+ + L +V N ++ Y G LDEA
Sbjct: 145 HKNVVSWTVMLGGLLQEGR-----VDDARKLFDMMPEKDVVAVTN-MIGGYCEEGRLDEA 198
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-----VSLQLGLDMYTLASIL 238
+ +F EM + ++ V+W +MV Y ++ + A +LF+ M VS L YT + +
Sbjct: 199 RALFDEMPK-RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRM 257
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+SL F A +K N I G GL +G++ +VF+ + + D
Sbjct: 258 REASSL--------FDAMPVKPVVVCNEMIMGFGL-------NGEVDKARRVFKGMKERD 302
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIH 356
W+ MI Y +K Y +ALG F+++ R G + S + V+S C +L S GKQ+H
Sbjct: 303 NGTWSAMIKVYERKG-YELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVH 361
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A ++ E + + V + L+ MY KCGNL A+++F+R P + V NSMI GY+QHG+G
Sbjct: 362 AQLVRSEFDQD-LYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLG 420
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL +F M + +PP ++TF+ VLSAC+++GKV EG + F MK + EP EHY+C
Sbjct: 421 EEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYAC 480
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSN 519
++DLLGRA ++ +A +L+E MP P +I A A QLEP N
Sbjct: 481 LVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKN 540
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SHPM 578
A PYV+L+N+YA G+W +V +R ++ R V K PG SWIEV+K++H+F D HP
Sbjct: 541 AGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPE 600
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
I LE++ +++AGY PD K L +HSEKLAVA+GLL G
Sbjct: 601 QPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGM 660
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+CGDCH+AIK I+ + GREI +RD RFH FKDG CSC DYW
Sbjct: 661 PIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 42/212 (19%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL CV L GK +HA +++ Y+++ I +Y KCG L A FN
Sbjct: 344 VLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFN------ 397
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ P D+V +N++I+ Y+ G E AL++F DM
Sbjct: 398 -------------------------RFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCS 432
Query: 125 KRFDTDGFTLSGLITASS------NNLCLIKQLHC-LAIYCGFDHYASVNNSLLTCYSRN 177
D T G+++A S L L + + C + G +HYA L+ R
Sbjct: 433 SGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYA----CLVDLLGRA 488
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
++EA ++ +M D + W +++ A H
Sbjct: 489 DQVNEAMKLVEKMPMEPDAIVWGALLGACRTH 520
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 110/247 (44%), Gaps = 61/247 (24%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD------------------ 393
G+ I + +++R + ++ +A Y++ G L+ AR++FD
Sbjct: 5 GRAILRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAA 64
Query: 394 ---------------RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
+MP+ NTVS N +I+G+ ++G+ EA R+F+ M + N+ +++
Sbjct: 65 YFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNV----VSW 120
Query: 439 VSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
S++ G VAE ++ F M K++ ++ M+ L + G++ DA +L +
Sbjct: 121 TSMVRGYVRNGDVAEAERLFWHMPHKNVVS-------WTVMLGGLLQEGRVDDARKLFDM 173
Query: 497 MPFNPGSIAL--------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
MP +A+ +A F ++ N V + + + YA +GK + +
Sbjct: 174 MP-EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKL 232
Query: 543 RRLMRDR 549
+M +R
Sbjct: 233 FEVMPER 239
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/663 (36%), Positives = 366/663 (55%), Gaps = 73/663 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ I +P+L+ +NT++ +A D SAL ++ M + ++ L+ A
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 142 SNNLCLIKQLHC--LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------ 187
S +Q+H L + CG D Y V+ SL++ Y+RNG L++A++VF
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRY--VHTSLISMYARNGGLEDARKVFDASSHRDVVSCT 134
Query: 188 ------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ +D VSWN+M+ Y ++ EAL+LF+EM+ +
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRP 194
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKS----GFHQNSHIGSGLIDLYAKCSGDMRD 285
D TL S+++A + G Q H+ + GF + I + LIDLY+KC GD+
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC-GDVET 253
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+FE + D+V WNT+I GY+ Y +AL F+++ R G P+D + + V+ AC+
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYK-EALLLFQEMLRSGECPNDVTLLSVLPACA 312
Query: 346 NLSP-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+L +G+ IH + K++ +N S+ +L+ MY+KCG++E A ++F+ M + S
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSW 372
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI G+A HG A LF M + P +ITFV +LSAC+H+G + G++ F M
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA----------- 508
+ P+ EHY CMIDLLG +G +AE +I MP P + LKA
Sbjct: 433 DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAE 492
Query: 509 --ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
A +++EP N+ YV+L+NIYA +G+WE+VA +R ++ +G++K PG S IEV +
Sbjct: 493 SFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H F+ D HP +EI++ LEEM ++++AG+ PD KE L HHSEKLA
Sbjct: 553 HEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLA 612
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGL+ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC
Sbjct: 613 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCC 672
Query: 675 DYW 677
DYW
Sbjct: 673 DYW 675
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/737 (33%), Positives = 372/737 (50%), Gaps = 102/737 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK-CGCLSAAHHAFNQT 60
F VL G +DL + L L LK + + +Y++ L A F+
Sbjct: 226 FASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGM 285
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N ++++ ++AA + RI +A ++ + P + S L++ A CG A LF+
Sbjct: 286 VERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFE 345
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ D +S N+++T Y +NG +
Sbjct: 346 QI------PDPIVVSW-------------------------------NAMITGYMQNGMV 368
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
DEAK +F M ++ +SW M+ Y Q+ EAL L Q + + + +L S A
Sbjct: 369 DEAKELFDRM-PFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLA 427
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC--------------------- 279
+ + L G Q H+ +K+G NS++ + LI +Y KC
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSW 487
Query: 280 ---------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
+ + D +F+ + D+V W T+IS Y+Q E D+A+ FK +
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAER-GDEAVEFFKTMLHEHE 546
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ ++S C L S LG+QIH + IK + S I V NAL++MY KCG D+
Sbjct: 547 KPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELI-VANALMSMYFKCG-CADSH 604
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
++FD M E + + N+ I G AQHG+G EA++++E M + P +TFV +L+AC+H G
Sbjct: 605 KVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAG 664
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------ 503
V EG ++F M +G P EHY+CM+DLLGR G + AE+ I MP P +
Sbjct: 665 LVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSAL 724
Query: 504 -----------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
I +AA EPSNA YVML+NIY++ G W EVA +R++M+ RGV
Sbjct: 725 LGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVS 784
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K+PG SW++++ ++H FV D H I+EI L+++ ++ GYVPD
Sbjct: 785 KEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEE 844
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
KE L++HSEKLAVA+GLL T G PI +MKNLRICGDCH IKF+S + R+I +RD
Sbjct: 845 QKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDG 904
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH F++G CSCGD+W
Sbjct: 905 NRFHHFRNGSCSCGDFW 921
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 214/444 (48%), Gaps = 57/444 (12%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+ + H A +++ H+ + AR R+ AR++FD +P D++++N++ISAY +
Sbjct: 24 VRSVHRALDKSAHS------ARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNS 77
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN-N 168
G E A LF + T LSG L + L ++ G +V N
Sbjct: 78 GMLEDARILFDAISGGNVRTATILLSGYAR-------LGRVLDARRVFDGMPERNTVAWN 130
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL- 227
++++CY +NG + A+R+F M +D SWNSMV Y R+ ++A LF++M L
Sbjct: 131 AMVSCYVQNGDITMARRLFDAMPS-RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLV 189
Query: 228 -----------------GLDMYTL-------------ASILTAFTSLEDLVGGLQFHAHL 257
G D++ + AS+L+A T L+DL G L+ L
Sbjct: 190 TWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDL-GVLEVLRPL 248
Query: 258 I-KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+ K+GF + IG+ ++++Y + + + +K F+ + + + W+TMI+ S D
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRI-D 307
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALV 376
A+ + + + V P + + ++ C G+ A + +I + NA++
Sbjct: 308 AAIAVYGR-DPVKSIPSQTALLTGLARC-------GRITEARILFEQIPDPIVVSWNAMI 359
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
Y + G +++A+ LFDRMP NT+S MIAGYAQ+G EAL L + + + P+
Sbjct: 360 TGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLS 419
Query: 437 TFVSVLSACAHTGKVAEGQKYFSM 460
+ S AC+H G + G++ S+
Sbjct: 420 SLTSSFLACSHIGALETGRQVHSL 443
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 214/447 (47%), Gaps = 41/447 (9%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
+N V ++A +S Y + G ++ A F+ +V S+N ++ Y ++ A
Sbjct: 124 RNTVAWNAMVS-----CYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWN 178
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NN 144
LF Q+PQ +LV++ +IS Y +F+ M + D + +++A + +
Sbjct: 179 LFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQD 238
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG-FLDEAKRVFYEMGEIKDEVSWNSMV 203
L +++ L L + GF+ + S+L Y+R+ LD A + F M E ++E +W++M+
Sbjct: 239 LGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVE-RNEYTWSTMI 297
Query: 204 VAYGQHRE--------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
A G + ++ +L GL I A E + +
Sbjct: 298 AALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGL--ARCGRITEARILFEQIPDPIVVSW 355
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
+ + +G+ QN G++D + ++F+ +P + + W MI+GY+Q S
Sbjct: 356 NAMITGYMQN-----GMVD----------EAKELFDRMPFRNTISWAGMIAGYAQNGR-S 399
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
++AL + L+R G P S ACS++ G+Q+H+L +K + N V NA
Sbjct: 400 EEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY-VCNA 458
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++MY KC N+E R++F+RM +TVS NS IA Q+ + +A +F+ ML ++
Sbjct: 459 LISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDV--- 515
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMM 461
+++ +++SA A + E ++F M
Sbjct: 516 -VSWTTIISAYAQAERGDEAVEFFKTM 541
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
S ++A + ++ G L +AR +FD MP + ++ NSMI+ Y G+ +A LF+ +
Sbjct: 34 SAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGG 93
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
N+ I +LS A G+V + ++ F M E ++ M+ + G +T
Sbjct: 94 NVRTATI----LLSGYARLGRVLDARRVFDGMP-----ERNTVAWNAMVSCYVQNGDITM 144
Query: 490 AERLIEAMP-------------FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
A RL +AMP + + A N F Q+ N V + ++ + Y +
Sbjct: 145 ARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQH 204
Query: 537 EEVATIRRLMRDRG 550
+ I R+M G
Sbjct: 205 GKGWDIFRMMHHEG 218
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 258/742 (34%), Positives = 389/742 (52%), Gaps = 105/742 (14%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQH---------ANVFSFNVLLAAYARQLRIASARQLF 88
+HF L Y+ C + H +NVF N L+A Y+R + A +F
Sbjct: 148 DHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVF 207
Query: 89 DQIPQP---DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT------ 139
D+I + D++S+N++++A+ + +AL LF +M + S +I+
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILP 267
Query: 140 --ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
AS L K++H AI G A V N+L+ Y++ G + +A VF M E KD V
Sbjct: 268 ACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM-EFKDVV 326
Query: 198 SWNSMVVAYGQHRE-----------------------------------GLEALQLFQEM 222
SWN+MV Y Q + G EAL FQ+M
Sbjct: 327 SWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH------------IGS 270
+ + T+ S+L+A SL L G++ HA+ +K + + +
Sbjct: 387 ILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHN 446
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
LID+Y+KC + +F IP + ++V W MI GY+Q + S+ AL F ++
Sbjct: 447 ALIDMYSKCR-SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGD-SNDALKLFSEMISK 504
Query: 329 GYH--PDDCSFVCVISACSNLSP-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGN 384
Y P+ + C++ AC++LS +GKQIHA +T E S+ V N L+ MYSKCG+
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
++ AR +FD MP+ N VS SM++GY HG G EAL +F+ M + P +I+F+ +L A
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS- 503
C+H+G V +G YF +M+ +G +HY+C+IDLL R+G+L A + I+ MP P +
Sbjct: 625 CSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAA 684
Query: 504 ----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+A A N + ++ N Y +++NIYA + +W++VA IR+LM+
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMK 744
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
G++K+PG SW++ KK F D SHP+ EI++ LE + ++K GYVP
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804
Query: 601 ---DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
D+EK L HSEKLA+A+GLL+TS G PI + KNLR+CGDCH+A +IS I EI
Sbjct: 805 DVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEI 864
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD+ RFH FK+G CSCG YW
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 20/245 (8%)
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+G+G++ Y C G D + V E + V WN ++ + + E D+A+G ++ R
Sbjct: 85 LGTGVVASYLAC-GATSDALSVLERVVPSPAVWWNLLVRAHIE-EGRLDRAIGVSCRMLR 142
Query: 328 VGYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G PD + + AC L PS G H L SN + V NALVAMYS+ G+L
Sbjct: 143 AGTKPDHFTLPYALKACGEL-PSYRSGSAFHGLICCNGFESN-VFVCNALVAMYSRSGSL 200
Query: 386 EDARRLFDRMPEH---NTVSLNSMIAGYAQHGIGMEALRLFEWMLE------TNIPPTNI 436
EDA +FD + + +S NS++A + + AL LF M TN I
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDII 260
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC--MIDLLGRAGKLTDAERLI 494
+ V++L ACA + + ++ S F + + C +ID + G + DA +
Sbjct: 261 SIVNILPACASLKALPQTKEIHSYAIRNGTF---ADAFVCNALIDTYAKCGSMKDAVNVF 317
Query: 495 EAMPF 499
M F
Sbjct: 318 NVMEF 322
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/656 (36%), Positives = 368/656 (56%), Gaps = 39/656 (5%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
AF NVF L+ Y+R AR LFD +P D+ S+N +IS G+ A
Sbjct: 241 AFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 300
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
L + +MR + + T+ ++ ++ +H I G + V+N+L+
Sbjct: 301 LDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G L++A++ F +M I D VSWNS++ AY Q+ + + A F +M D+ T
Sbjct: 361 YAKFGNLEDARKAFQQM-FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L S+ + D H +++ G+ ++ IG+ ++D+YAK G + KVFE
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKL-GLLDSAHKVFEI 478
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSP-S 350
I D++ WNT+I+GY+Q + +A+ +K + P+ ++V ++ A +++
Sbjct: 479 ILVKDVISWNTLITGYAQNG-LASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 537
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G +IH IK + + + V L+ +Y KCG L DA LF ++P+ ++V+ N++I+ +
Sbjct: 538 QGMRIHGRVIKTNLHLD-VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
HG + L+LF ML+ + P ++TFVS+LSAC+H+G V EG+ F +M++ +G +P
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPS 655
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFL 513
+HY CM+DLLGRAG L A I+ MP P G+I L A++
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+++ N YV+L+NIYA GKWE V +R L R+RG++K PG+S IEV +++ VF +
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 775
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
SHP KEI+ L ++ KMK GY+PD KE L HSE+LA+AFG++S
Sbjct: 776 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 835
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T PI + KNLR+CGDCHNA KFIS I REI VRD+ RFH FKDG CSCGDYW
Sbjct: 836 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 227/449 (50%), Gaps = 30/449 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD-M 122
++F L+ YA ++ +R FDQIPQ D+ ++N++ISAY G A+ F +
Sbjct: 150 SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLL 209
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D +T ++ A L +++HC A GF V SL+ YSR GF
Sbjct: 210 LVSEIRPDFYTFPPVLKA-CGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F +M +D SWN+M+ Q+ +AL + EM + ++ T+ SIL
Sbjct: 269 ARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
L D+ + H ++IK G + + + LI++YAK G++ D K F+++ D+V WN
Sbjct: 328 QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF-GNLEDARKAFQQMFITDVVSWN 386
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA------CSNLSPSLGKQIH 356
++I+ Y Q ++ A G F K+ G+ PD + V + S C N + +H
Sbjct: 387 SIIAAYEQNDD-PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN-----SRSVH 440
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
++ + + NA+V MY+K G L+ A ++F+ + + +S N++I GYAQ+G+
Sbjct: 441 GFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLA 500
Query: 417 MEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYF------SMMKDMFGFEP 469
EA+ +++ M E I P T+VS+L A AH G + +G + ++ D+F
Sbjct: 501 SEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFV--- 557
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+C+ID+ G+ G+L DA L +P
Sbjct: 558 ----ATCLIDVYGKCGRLVDAMSLFYQVP 582
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 222/475 (46%), Gaps = 54/475 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C D+ T +H +K+ + F ++SN I +Y+K G L A AF Q
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N ++AAY + +A F ++ QPDL++ +L S A D +++
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S+ + + G+ + ++ + N+++ Y++
Sbjct: 438 SVHGFIMRR-----GWLMEDVV---------------------------IGNAVVDMYAK 465
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLA 235
G LD A +VF E+ +KD +SWN+++ Y Q+ EA+++++ M ++ + T
Sbjct: 466 LGLLDSAHKVF-EIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 524
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SIL A+ + L G++ H +IK+ H + + + LID+Y KC G + D M +F ++PQ
Sbjct: 525 SILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC-GRLVDAMSLFYQVPQ 583
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQ 354
V WN +IS + ++++ L F ++ G PD +FV ++SACS+ GK
Sbjct: 584 ESSVTWNAIISCHG-IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ-H 413
L + I+ + + +V + + G LE A MP S+ + G + H
Sbjct: 643 CFRLMQEYGIKPS-LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIH 701
Query: 414 G---IGMEAL-RLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKD 463
G +G A RLFE + N+ + +LS A+ GK K S+ ++
Sbjct: 702 GNIELGKFASDRLFE------VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARE 750
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 128/250 (51%), Gaps = 15/250 (6%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HA L+ +G Q+ I + L++LYA GD+ F++IPQ D+ WN+MIS Y
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANL-GDVSLSRCTFDQIPQKDVYTWNSMISAYVHNG 196
Query: 313 EYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISV 371
+ +A+GCF +L V PD +F V+ AC L G++IH K+ + N + V
Sbjct: 197 HFH-EAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD--GRRIHCWAFKLGFQWN-VFV 252
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+L+ MYS+ G AR LFD MP + S N+MI+G Q+G +AL + + M I
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF----GFEPEGEHYSCMIDLLGRAGKL 487
+T VS+L C G ++ +M+ ++ G E + + +I++ + G L
Sbjct: 313 KMNFVTVVSILPVCPQLGDIST-----AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNL 367
Query: 488 TDAERLIEAM 497
DA + + M
Sbjct: 368 EDARKAFQQM 377
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/645 (35%), Positives = 373/645 (57%), Gaps = 43/645 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ AY + + AR++FD++P +V++N++I++Y G ++ A+ +++ M
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173
Query: 129 TDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFD-HYASVNNSLLTCYSRNGFLDEAK 184
D FT S + A S+ L L+ ++ H ++ G V ++L+ Y++ G + +A+
Sbjct: 174 PDEFTFSSVFKAFSD-LGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 232
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
V ++ KD V + +++V Y H E E+LQ+F+ M + + YTL+S+L +L
Sbjct: 233 LVSDQVVG-KDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 291
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
EDL G H ++K+G + L+ +Y +C G + D +KVF++ P+ V W ++
Sbjct: 292 EDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRC-GLVDDSLKVFKQFINPNQVTWTSV 350
Query: 305 ISGYSQ--KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
I G Q +EE AL F+++ R P+ + V+ ACS+L+ GKQIHA+ +K
Sbjct: 351 IVGLVQNGREEI---ALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMK 407
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ ++ V AL+ Y KCG+ E AR +F+ + E + VS+NSMI YAQ+G G EAL+
Sbjct: 408 FGLDIDKY-VGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQ 466
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF M +T + P N+T++ VLSAC + G + EG FS ++ E +HY+CM+DLL
Sbjct: 467 LFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLL 526
Query: 482 GRAGKLTDAERLIEAMPFNPGSI----------------ALKAANHFLQLEPSNAVPYVM 525
GRAG+L +AE LI + + I A + N + L P + +V+
Sbjct: 527 GRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVL 586
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L+N+YA++G W +V ++ MR+ ++K P SW++V++++H F+A D SHP ++I
Sbjct: 587 LSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREK 646
Query: 586 LEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY-GEPILVMK 632
LEE+ K+K+ GYVPD K + L +HSEKLAVAF L ++Y I ++K
Sbjct: 647 LEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILK 706
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCH +KF+S I GR+I RD RFH F++G CSCGDYW
Sbjct: 707 NLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 210/409 (51%), Gaps = 15/409 (3%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NVF + L+ YA+ ++ AR + DQ+ D+V + LI Y+ G+ +L +F++M
Sbjct: 210 SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM 269
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+K + + +TLS ++ N +L + +H L + G + + SLLT Y R G +
Sbjct: 270 TKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLV 329
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D++ +VF + ++V+W S++V Q+ AL F++M+ + + +TL+S+L A
Sbjct: 330 DDSLKVFKQFIN-PNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRA 388
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+SL L G Q HA ++K G + ++G+ LID Y KC G VF + + D+V
Sbjct: 389 CSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC-GSTEIARSVFNGLLEVDVVS 447
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTI 360
N+MI Y+Q + +AL F + G P++ +++ V+SAC+N + L + H +
Sbjct: 448 VNSMIYSYAQN-GFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN-AGLLEEGCHIFSS 505
Query: 361 -----KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
IE+ + + +V + + G L++A L +++ + V ++++ HG
Sbjct: 506 ARNSGNIELTKDHYA---CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGD 562
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
A R+ +++ P T V + + A TG ++ + S M++M
Sbjct: 563 VEMAKRVMNRVIDL-APEDGGTHVLLSNLYASTGNWSKVIEMKSAMREM 610
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 162/380 (42%), Gaps = 46/380 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C DL +G+ +H L +K + + + +Y +CG
Sbjct: 280 TLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGL----------- 328
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + ++F Q P+ V++ ++I G E AL F+
Sbjct: 329 --------------------VDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFR 368
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + FTLS ++ A S +L ++ KQ+H + + G D V +L+ Y +
Sbjct: 369 QMLRSSITPNSFTLSSVLRACS-SLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC 427
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A+ VF + E+ D VS NSM+ +Y Q+ G EALQLF M L + T +
Sbjct: 428 GSTEIARSVFNGLLEV-DVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGV 486
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L+A + L G + SG + ++DL + +G +++ + ++
Sbjct: 487 LSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR-AGRLKEAEMLINQVNIS 545
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSLGKQI 355
D+V+W T++S + D + + +NRV P+D ++ SNL S G
Sbjct: 546 DVVIWRTLLSAC---RIHGDVEMAK-RVMNRVIDLAPEDGGTHVLL---SNLYASTGNWS 598
Query: 356 HALTIKIEIRSNRISVNNAL 375
+ +K +R R+ N A+
Sbjct: 599 KVIEMKSAMREMRLKKNPAM 618
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
S+ N L+ Y KCG++ AR++FD +P + V+ NSMIA Y ++G EA+ +++ M+
Sbjct: 111 SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 170
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY-SCMIDLLGRAGKLT 488
I P TF SV A + G V EGQ+ + G S ++D+ + GK+
Sbjct: 171 GILPDEFTFSSVFKAFSDLGLVHEGQRAHG-QSVVLGVGVSNVFVGSALVDMYAKFGKMR 229
Query: 489 DAERLI 494
DA RL+
Sbjct: 230 DA-RLV 234
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 367/649 (56%), Gaps = 39/649 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF L+ YA+ + A++LF + D+V++N +I+ + G + A+ L M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201
Query: 123 REKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+E+ + T+ G++ + L K LH + FD+ V LL Y++ L
Sbjct: 202 QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCL 261
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM--YTLASIL 238
A+++F MG +++EVSW++M+ Y EAL+LF +M+ L+ +D TL S+L
Sbjct: 262 LYARKIFDVMG-VRNEVSWSAMIGGYVXSDCMKEALELFDQMI-LKDAMDPTPVTLGSVL 319
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL G + H ++IK G + +G+ L+ +YAKC G + D ++ F+ + D
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKC-GVIDDAIRFFDXMNPKDS 378
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V ++ ++SG Q + AL F+ + G PD + + V+ ACS+L+ G H
Sbjct: 379 VSFSAIVSGCVQNGNAA-VALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 437
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I ++ + + NAL+ MYSKCG + AR +F+RM H+ VS N+MI GY HG+GM
Sbjct: 438 YLIVRGFATDTL-ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF +L + P +ITF+ +LS+C+H+G V EG+ +F M F P EH CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+D+LGRAG + +A I MPF P + + + L P +
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+NIY+A+G+W++ A IR +D G++K PG SWIE+ +H FV D SH +
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 676
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ LEE+ +MK+ GY +KE+ L++HSEKLA+AFG+L+ G PI
Sbjct: 677 QINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPI 736
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LV KNLR+CGDCH AIKF++ I REITVRD RFH FK+G C+CGD+W
Sbjct: 737 LVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 235/508 (46%), Gaps = 54/508 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ +L+ C+ + L K +H +LKN + + + LY C NQ
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC----------NQ- 58
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR+LFD+IP P ++ +N +I AYA G + A+ L+
Sbjct: 59 --------------------VVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYH 98
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + +T ++ A S L + ++H A G + V +L+ Y++ G
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L EA+R+F M +D V+WN+M+ + +A+QL +M + + T+ +L
Sbjct: 159 ILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM----KVFEEIP 294
+ L G H + ++ F +G+GL+D+YAKC C+ K+F+ +
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQ-----CLLYARKIFDVMG 272
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSP-SLG 352
+ V W+ MI GY + +AL F ++ + P + V+ AC+ L+ S G
Sbjct: 273 VRNEVSWSAMIGGYVX-SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+++H IK+ + I + N L++MY+KCG ++DA R FD M ++VS +++++G Q
Sbjct: 332 RKLHCYIIKLGXVLD-ILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQ 390
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG---QKYFSMMKDMFGFEP 469
+G AL +F M + I P T + VL AC+H + G Y + GF
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR----GFAT 446
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + +ID+ + GK++ A + M
Sbjct: 447 DTLICNALIDMYSKCGKISFAREVFNRM 474
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C DL G+ LH +K L N + +Y+KCG
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGV----------- 362
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A + FD + D VS++ ++S G+ ALS+F+
Sbjct: 363 --------------------IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFR 402
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQL--HCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ D D T+ G++ A S+ L H I GF + N+L+ YS+ G
Sbjct: 403 MMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCG 462
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ VF M D VSWN+M++ YG H G+EAL LF ++++L L D T +L
Sbjct: 463 KISFAREVFNRMDR-HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521
Query: 239 TAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
++ S LV G L F A ++D+ + +G + + +P +
Sbjct: 522 SS-CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR-AGLIDEAHHFIRNMPFE 579
Query: 296 PDLVLWNTMISG 307
PD+ +W+ ++S
Sbjct: 580 PDVRIWSALLSA 591
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/711 (34%), Positives = 385/711 (54%), Gaps = 76/711 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C R ++ G +H L LK + Y++ I LYS
Sbjct: 155 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS--------------- 196
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R + +AR LFD++P D+ S+N +IS Y G+ + AL+L
Sbjct: 197 ----------------RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R D T+ L++A + + +H +I G + V+N L+ Y+ G
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L + ++VF M ++D +SWNS++ AY + + L A+ LFQEM ++ D TL S+
Sbjct: 297 RLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ + L D+ ++ G F ++ IG+ ++ +YAK G + VF +P D
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL-GLVDSARAVFNWLPNTD 414
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQI 355
++ WNT+ISGY+Q ++ +A+ + + G + ++V V+ ACS G ++
Sbjct: 415 VISWNTIISGYAQNG-FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K + + + V +L MY KCG LEDA LF ++P N+V N++IA + HG
Sbjct: 474 HGRLLKNGLYLD-VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +A+ LF+ ML+ + P +ITFV++LSAC+H+G V EGQ F MM+ +G P +HY
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPS 518
CM+D+ GRAG+L A + I++M P G++ L A+ H ++EP
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ +V+L+N+YA++GKWE V IR + +G++K PG+S +EV ++ VF + +HPM
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPM 712
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+E++ L + K+K GYVPD KE L+ HSE+LA+AF L++T
Sbjct: 713 YEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKT 772
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+CGDCH+ KFIS I REI VRD+ RFH FK+G CSCGDYW
Sbjct: 773 TIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 243/508 (47%), Gaps = 34/508 (6%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
CL A Q Q NV L+ Y +A AR FD I D+ ++N +IS Y
Sbjct: 72 CLHARLVVSKQIQ--NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 109 CGDTESALSLFK-DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G++ + F M D T ++ A + ++HCLA+ GF V
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA-CRTVIDGNKIHCLALKFGFMWDVYVA 188
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
SL+ YSR + A+ +F EM ++D SWN+M+ Y Q EAL L + +
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEM-PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA--- 244
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+D T+ S+L+A T D G+ H++ IK G + + LIDLYA+ G +RDC
Sbjct: 245 -MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE-FGRLRDCQ 302
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
KVF+ + DL+ WN++I Y E+ +A+ F+++ PD + + + S S L
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQ-PLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 348 SPSLG-KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + T++ I++ NA+V MY+K G ++ AR +F+ +P + +S N++
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 407 IAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDM 464
I+GYAQ+G EA+ ++ M E I T+VSVL AC+ G + +G K + ++K+
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN- 480
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYV 524
G + + + D+ G+ G+L DA L F Q+ N+VP+
Sbjct: 481 -GLYLDVFVVTSLADMYGKCGRLEDALSL------------------FYQIPRVNSVPWN 521
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQ 552
L + G E+ + + M D GV+
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
T F +L HA L+ S QN I + L++LY G++ F+ I D+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL-GNVALARHTFDHIQNRDV 117
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKK-LNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
WN MISGY + S + + CF + G PD +F V+ AC + G +IH
Sbjct: 118 YAWNLMISGYGRAGN-SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID--GNKIHC 174
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K + + V +L+ +YS+ + +AR LFD MP + S N+MI+GY Q G
Sbjct: 175 LALKFGFMWD-VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L + + ++T VS+LSAC G G S G E E + +
Sbjct: 234 EALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHS-YSIKHGLESELFVSNKL 288
Query: 478 IDLLGRAGKLTDAERLIEAM 497
IDL G+L D +++ + M
Sbjct: 289 IDLYAEFGRLRDCQKVFDRM 308
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 364/653 (55%), Gaps = 51/653 (7%)
Query: 67 SFNVLL-AAYARQLRIASARQLFDQIPQPDLVS--YNTLISAYADCGDTESALSLFKDM- 122
SF+ LL AA A + A LF P+P L + YN L+ A+ G E AL LF +M
Sbjct: 51 SFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEML 110
Query: 123 -REKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
D T + + S + +C + + + A+ G V +SL+ Y+ G
Sbjct: 111 HAASACPADQHTAACALK-SCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCG 169
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ VF + E V WN++V AY ++ + +E +++F+ M+ + + D TL S++
Sbjct: 170 DVAAARLVF-DAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVV 228
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
TA + D G H+ + G +N + + L+D+YAKC G++ ++F+ + D+
Sbjct: 229 TACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKC-GEIGKARRLFDGMQSRDV 287
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W+ MISGY+Q ++ +ALG F ++ P+D + V V+SAC+ L GK +H+
Sbjct: 288 VAWSAMISGYTQADQ-CREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHS 346
Query: 358 LTIKIEIRSNRISVNN----ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+R R+S+ ALV Y+KCG ++DA F+ MP N+ + ++I G A +
Sbjct: 347 Y-----VRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 401
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G EAL LF M E I PT++TF+ VL AC+H+ V EG+++F M +G +P EH
Sbjct: 402 GRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEH 461
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLE 516
Y CM+DLLGRAG + +A + I MP P ++ + A + L
Sbjct: 462 YGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLN 521
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
PS++ YV+L+NIYA++G+W++ A +R+ M+DRG++K PG S IE+ + F AED H
Sbjct: 522 PSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDH 581
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSY 624
P ++EI+ +EEM ++K AGYVP +KE + HHSEKLA+AFGL+
Sbjct: 582 PELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDP 641
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KNLR+C DCH+A K IS + REI VRD FH FKDG CSC DYW
Sbjct: 642 GATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 182/375 (48%), Gaps = 12/375 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
+A + A+ F + L+ YA +A+AR +FD + +V +N +++AY GD
Sbjct: 145 YAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWME 204
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
+ +FK M E D TL ++TA + L K + G + +L+
Sbjct: 205 VVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMD 264
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y++ G + +A+R+F M + +D V+W++M+ Y Q + EAL LF EM ++ +
Sbjct: 265 MYAKCGEIGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T+ S+L+A L L G H+++ + + +G+ L+D YAKC G + D ++ FE
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKC-GCIDDAVEAFES 382
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPS 350
+P + W +I G + +AL F + G P D +F+ V+ ACS+ L
Sbjct: 383 MPVKNSWTWTALIKGMATNGR-GREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEE 441
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
+ ++ I+ R+ +V + + G +++A + MP E N V ++++
Sbjct: 442 GRRHFDSMARDYGIKP-RVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSS 500
Query: 410 YAQH---GIGMEALR 421
A H GIG EAL+
Sbjct: 501 CAVHRNVGIGEEALK 515
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 36/230 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK +H+ + + + L + Y+KCGC+ A A
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA---- 379
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F+ +P + ++ LI A G AL LF
Sbjct: 380 ---------------------------FESMPVKNSWTWTALIKGMATNGRGREALELFS 412
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ----LHCLAIYCGFDHYASVNNSLLTCYSR 176
MRE + T G++ A S++ CL+++ +A G ++ R
Sbjct: 413 SMREAGIEPTDVTFIGVLMACSHS-CLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGR 471
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G +DEA + M + V W +++ + HR + ++++SL
Sbjct: 472 AGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLN 521
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/645 (35%), Positives = 353/645 (54%), Gaps = 37/645 (5%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F L+ A + I ARQ+FD +P+P + +N +I Y+ + AL ++ M+
Sbjct: 54 FLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLA 113
Query: 126 RFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
R D FT L+ A ++L + + +H GF+ V N L+ Y++ L A
Sbjct: 114 RVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCA 173
Query: 184 KRVFYEMG-EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
+ VF + + VSW ++V AY Q+ E +EAL++F +M + + D L S+L AFT
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFT 233
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
L+DL G HA ++K G + L +YAKC G + +F+++ P+L+LWN
Sbjct: 234 CLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKC-GQVATAKILFDKMKSPNLILWN 292
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIK 361
MISGY+ K ++ A+ F ++ PD S ISAC+ + S + + +
Sbjct: 293 AMISGYA-KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSR 351
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ R + + +++AL+ M++KCG++E AR +FDR + + V ++MI GY HG EA+
Sbjct: 352 SDYRDD-VFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAIS 410
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
L+ M + P ++TF+ +L AC H+G V EG +F+ M D P+ +HY+C+IDLL
Sbjct: 411 LYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLL 469
Query: 482 GRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYV 524
GRAG L A +I+ MP PG + AA ++PSN YV
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYV 529
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
L+N+YAA+ W+ VA +R M+++G+ K G SW+EV+ ++ F D SHP +EI
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIER 589
Query: 585 YLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
+E + ++K+ G+V +K E+ L HSE++ +A+GL+ST G + + K
Sbjct: 590 QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITK 649
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR C +CH A K IS + GREI VRDT RFH FKDG CSCGDYW
Sbjct: 650 NLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 185/374 (49%), Gaps = 18/374 (4%)
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+D F S + SS + ++Q+H + G + L+ S G + A++VF
Sbjct: 20 SDSFYAS--LIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFD 77
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
++ WN+++ Y ++ +AL ++ +M ++ D +T +L A L L
Sbjct: 78 DLPR-PQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQ 136
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQPD--LVLWNTMI 305
G HA + + GF + + +GLI LYAKC C + VFE +P P+ +V W ++
Sbjct: 137 MGRFVHAQVFRLGFEADVFVQNGLIALYAKCR--RLGCARTVFEGLPLPERTIVSWTAIV 194
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
S Y+Q E +AL F ++ ++ PD + V V++A + L G+ IHA +K+ +
Sbjct: 195 SAYAQNGE-PVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGL 253
Query: 365 RSNR---ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ IS+N MY+KCG + A+ LFD+M N + N+MI+GYA++G +A+
Sbjct: 254 ETEPDLLISLNT----MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAID 309
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF M+ ++ P I+ S +SACA G + E ++ + + S +ID+
Sbjct: 310 LFHEMINKDVRPDTISITSAISACAQVGSL-EQARWMDEYVSRSDYRDDVFISSALIDMF 368
Query: 482 GRAGKLTDAERLIE 495
+ G + A + +
Sbjct: 369 AKCGSVECARSVFD 382
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 38/350 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C G L G+ +HA + ++ N I LY+KC
Sbjct: 121 TFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKC------------- 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSL 118
R+ AR +F+ +P P+ +VS+ ++SAYA G+ AL +
Sbjct: 168 ------------------RRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEI 209
Query: 119 FKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ D L ++ A + +L + +H + G + + SL T Y++
Sbjct: 210 FSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAK 269
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + AK +F +M + + + WN+M+ Y ++ +A+ LF EM++ + D ++ S
Sbjct: 270 CGQVATAKILFDKM-KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITS 328
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++A + L ++ +S + + I S LID++AKC G + VF+
Sbjct: 329 AISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKC-GSVECARSVFDRTLDR 387
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
D+V+W+ MI GY + + +A+ ++ + R G HP+D +F+ ++ AC++
Sbjct: 388 DVVVWSAMIVGYGLHGQ-AREAISLYRAMERDGVHPNDVTFLGLLIACNH 436
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF + L+ +A+ + AR +FD+ D+V ++ +I Y G A+SL++ M
Sbjct: 357 DVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME 416
Query: 124 EKRFDTDGFTLSGLITASSNN------LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ T GL+ A +++ ++ I HYA + + L R
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLL----GRA 472
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G LD+A V M W +++ A +HR
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 368/651 (56%), Gaps = 40/651 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ F+ L+ AY R R+ A + FD++ D+ ++N ++S A+ LF M
Sbjct: 102 GDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRM 161
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ D T+S ++ + L +H A+ G D V N+++ Y + G L
Sbjct: 162 VMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGML 221
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+E ++VF M +D V+WNS++ + Q + A+++F M + D+ TL S+ +A
Sbjct: 222 EEVRKVFDGMSS-RDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
D+ GG H ++++ G+ I G+ ++D+YAK S + ++F+ +P D V
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLS-KIEAAQRMFDSMPVRDAV 339
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
WNT+I+GY Q + +A+ + + + G P +FV V+ A S+L G ++HA
Sbjct: 340 SWNTLITGYMQNG-LASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 398
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L+IK + + + V ++ +Y+KCG L++A LF++ P +T N++I+G HG G
Sbjct: 399 LSIKTGLNLD-VYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGA 457
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL LF M + I P ++TFVS+L+AC+H G V +G+ +F+MM+ +G +P +HY+CM
Sbjct: 458 KALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACM 517
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+D+ GRAG+L DA I MP P S + A+ + +L+P N
Sbjct: 518 VDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNV 577
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED--GSHPM 578
YV+++N+YA GKW+ V +R L+R + +QK PG+S IEVK+ ++VF + + HP
Sbjct: 578 GYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQ 637
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+EI L ++ K++ GYVPD KE+ L +HSE+LA+AFG+++T
Sbjct: 638 HEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRT 697
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ + KNLR+CGDCHNA K+IS I REI VRD+ RFH FKDG CSCGD+W
Sbjct: 698 PLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
P Q+HA +++ + + ALV Y + G + DA R FD M + + N+M+
Sbjct: 83 GPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAML 142
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+G ++ EA+ LF M+ + +T SVL C V G + ++ ++
Sbjct: 143 SGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMC-----VLLGDRALALAMHLYAV 197
Query: 468 EP--EGEHYSC--MIDLLGRAGKLTDAERLIEAM 497
+ + E + C MID+ G+ G L + ++ + M
Sbjct: 198 KHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGM 231
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 127/345 (36%), Gaps = 63/345 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL L G +HAL +K + Y+ I LY+KCG L A F QT
Sbjct: 376 TFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQT 435
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ +N +++ A A LF Q+ Q PD V++ +L++A + G +
Sbjct: 436 PRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGR 495
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ F M+ T G+ + + C++ + R
Sbjct: 496 NFFNMMQ---------TAYGIKPIAKHYACMVDM-----------------------FGR 523
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G LD+A M D W +++ A +G G A Q E+ +G Y
Sbjct: 524 AGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGY--YV 581
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L S + A D G+ L++ QN G + K S + VF
Sbjct: 582 LMSNMYAKVGKWD---GVDEVRSLVR---RQNLQKTPGWSSIEVKRS------VNVFYSG 629
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
Q ++ + Q EE + L K+ +GY P D SFV
Sbjct: 630 NQMNI---------HPQHEEIQRELLDLLAKIRSLGYVP-DYSFV 664
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/641 (36%), Positives = 353/641 (55%), Gaps = 73/641 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AY+ Q + AR +FD+ + ++V +N +I +Y + ALS+F+ M F+ D
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S +NL + Q+H + G D + N+L+ Y + G L EA++V
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI--LTAFTSLED 246
+M +D VSWNSMV Y Q + +AL++ +EM SL L D T+AS+ + +TSLE+
Sbjct: 197 QM-PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN 255
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ Q H +FE + + +L+ WN MI+
Sbjct: 256 V----------------QYIH--------------------NMFERMTKKNLISWNVMIA 279
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIR 365
Y ++A+ F ++ G PD + ++ AC +LS LG+++H K ++
Sbjct: 280 IYVNNS-MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQ 338
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + NAL+ MY+KCG LE+AR +FD+M + VS SM++ Y + G G +A+ LF
Sbjct: 339 PNLL-LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML++ P +I FVSVLSAC+HTG + +G+ YF MM + +G P EH++CM+DL GRAG
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
++ +A I+ MP P I L AA+ QL P + YV+L+N
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G W++V +R M+ G++K PG S +E+ Q+H F+A D HP K I+ L+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ KMK+ GY+P DKE L HSEKLA+ F +L+T G PI + KNLR+
Sbjct: 578 LVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRV 637
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH AIK IS I R I VRD RFH F +G CSCGDYW
Sbjct: 638 CGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 161/348 (46%), Gaps = 43/348 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G +L G +H +K + + ++ N + +Y KCGCL A +Q
Sbjct: 139 TFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 61 QHANVFSFNVLLAAYARQLRIASARQ---------------------------------- 86
+ +V S+N ++A YA+ + A +
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQY 258
Query: 87 ---LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+F+++ + +L+S+N +I+ Y + A+SLF M E D T++ L+ A +
Sbjct: 259 IHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGD 318
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L ++LH + N+LL Y++ G L+EA+ VF +M ++D VSW S
Sbjct: 319 LSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM-RLRDVVSWTS 377
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS- 260
M+ AYG+ +G +A+ LF +M+ D S+L+A + L G + + +
Sbjct: 378 MMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQY 437
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
G + ++DL+ + +G++ + +++P +P+ +W ++S
Sbjct: 438 GIVPRIEHFACMVDLFGR-AGEVEEAYSFIKQMPMEPNERVWGALLSA 484
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 45/238 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L G+ LH K + + L N + +Y+KCGCL
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLE--------- 358
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR +FD++ D+VS+ +++SAY G A++LF
Sbjct: 359 ----------------------EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFA 396
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M + + D +++A S+ L + H I +H+A ++
Sbjct: 397 KMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA----CMVDL 452
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLG 228
+ R G ++EA +M +E W +++ A H + GL A L ++ Q G
Sbjct: 453 FGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSG 510
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 360/647 (55%), Gaps = 45/647 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
L +AYAR + A+++FD+ + D+VS+N ++ AYA G A LF M +
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
TL T S+ L + +H A+ G D + N+LL Y+R G +EA+ +F
Sbjct: 324 PSKVTLVNASTGCSS-LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK 382
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED-- 246
+ + VSWN+M+ Q + A++LFQ M + T ++L A S +
Sbjct: 383 RIP--CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440
Query: 247 --LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP---QPDLVLW 301
+ G + H+ ++ G+ IG+ ++ +YA C G + + F+ + D+V W
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASC-GAIDEAAASFQRGAMEDRHDVVSW 499
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N +IS SQ + +ALG F++++ G P+ + V V+ AC+ + + G+ +H
Sbjct: 500 NAIISSLSQ-HGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLR 558
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEA 419
+ SN + V AL +MY +CG+LE AR +F+++ E + V N+MIA Y+Q+G+ EA
Sbjct: 559 HSGMESN-LFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L+LF M + P +FVSVLSAC+H G EG + F M+ +G P +HY+C +D
Sbjct: 618 LKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVD 677
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALKA----------------ANHFL-QLEPSNAVP 522
+LGRAG L DAE LI M P + K AN + +L+P +
Sbjct: 678 VLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESA 737
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+NI A +GKW+E A +R M RG++K+ G SWIE+K ++H FVA D SHP +EI
Sbjct: 738 YVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEI 797
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ LE + ++++ GYVPD KE+ L HSE+LA+A G++S+S + + V
Sbjct: 798 YRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRV 856
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
MKNLR+C DCHNA KFIS I +EI VRDT+RFH F DG CSCGDYW
Sbjct: 857 MKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 244/519 (47%), Gaps = 56/519 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C DL G+S+HA +++ + + L+N + +Y CGC
Sbjct: 130 TFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGC----------- 178
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ASA LF+++ + DLVS+N I+A A GD AL LF+
Sbjct: 179 --------------------VASAMLLFEKMER-DLVSWNAAIAANAQSGDLGIALELFQ 217
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M+ + TL +T + I+Q +H + G + V+ +L + Y+R
Sbjct: 218 RMQLEGVRPARITLVIALTVCAT----IRQAQAIHFIVRESGLEQTLVVSTALASAYARL 273
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L +AK VF E +D VSWN+M+ AY QH EA LF M+ + TL +
Sbjct: 274 GHLYQAKEVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNA 332
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
T +SL G H ++ G ++ +G+ L+D+Y +C G + +F+ IP +
Sbjct: 333 STGCSSLR---FGRMIHGCALEKGLDRDIVLGNALLDMYTRC-GSPEEARHLFKRIP-CN 387
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-----LSPSLG 352
V WNTMI+G SQK + +A+ F+++ G P +++ ++ A ++ + + G
Sbjct: 388 AVSWNTMIAGSSQKGQMK-RAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEG 446
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP---EHNTVSLNSMIAG 409
+++H+ + S ++ A+V MY+ CG +++A F R H+ VS N++I+
Sbjct: 447 RKLHSRIVSCGYASE-PAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+QHG G AL F M + P IT V+VL ACA + EG+ ++ G E
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS-GMES 564
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ + + GR G L A + E + + A
Sbjct: 565 NLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNA 603
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 215/456 (47%), Gaps = 30/456 (6%)
Query: 62 HANVFSF-------NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA + S N LL Y + + ++F ++ D S+ T+I+AY + G +
Sbjct: 52 HARIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKR 111
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F M+++ D T ++ A + +L + +H + G + + N LL
Sbjct: 112 AIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLH 171
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y G + A +F +M +D VSWN+ + A Q + AL+LFQ M QL
Sbjct: 172 IYGSCGCVASAMLLFEKME--RDLVSWNAAIAANAQSGDLGIALELFQRM---QLEGVRP 226
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+++ A T + H + +SG Q + + L YA+ G + +VF+
Sbjct: 227 ARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARL-GHLYQAKEVFDR 285
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
+ D+V WN M+ Y+Q S+ AL F ++ G P + V + CS+L G
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAAL-LFARMLHEGISPSKVTLVNASTGCSSL--RFG 342
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH ++ + + I + NAL+ MY++CG+ E+AR LF R+P N VS N+MIAG +Q
Sbjct: 343 RMIHGCALEKGLDRD-IVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQ 400
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK----VAEGQKYFSMMKDMFGFE 468
G A+ LF+ M + P T++++L A A + +AEG+K S + G+
Sbjct: 401 KGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSC-GYA 459
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
E + ++ + G + +A A F G++
Sbjct: 460 SEPAIGTAVVKMYASCGAIDEA-----AASFQRGAM 490
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 17/357 (4%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H + G + + N LL Y + L + + VF + E++DE SW +++ AY +
Sbjct: 49 RRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDVEEVFSRL-EVRDEASWTTIITAYTE 105
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
H + A+ +F M + D T ++L A L DL G HA +++SG S +
Sbjct: 106 HGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVL 165
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+ +Y C G + M +FE++ + DLV WN I+ +Q + AL F+++
Sbjct: 166 ANLLLHIYGSC-GCVASAMLLFEKMER-DLVSWNAAIAANAQSGDLG-IALELFQRMQLE 222
Query: 329 GYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
G P + V ++ C+ + + + IH + + + + V+ AL + Y++ G+L A
Sbjct: 223 GVRPARITLVIALTVCATIRQA--QAIHFIVRESGLEQTLV-VSTALASAYARLGHLYQA 279
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+ +FDR E + VS N+M+ YAQHG EA LF ML I P+ +T V+ + C+
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL 339
Query: 449 --GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
G++ G ++ K G + + + ++D+ R G +A L + +P N S
Sbjct: 340 RFGRMIHG---CALEK---GLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAVS 390
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ-HA 63
VL C G L G+ +H + + + +++ +Y +CG L +A F +
Sbjct: 537 VLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLF 119
+V FN ++AAY++ A +LF ++ Q PD S+ +++SA + G + +F
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIF 656
Query: 120 KDMRE 124
+ MR+
Sbjct: 657 RSMRQ 661
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/757 (33%), Positives = 391/757 (51%), Gaps = 111/757 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V K C L G SLHA ++ + ++ N + +Y KCG L AH+ F+
Sbjct: 261 TFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDL 320
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H + DLVS+N+++SAY D +AL+LF
Sbjct: 321 CHRGI----------------------------QDLVSWNSVVSAYMWASDANTALALFH 352
Query: 121 DMREKRF-DTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + D +L ++ A ++ + +Q+H +I G V N+++ Y++
Sbjct: 353 KMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKC 412
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMV---------------------------------- 203
G ++EA +VF M + KD VSWN+MV
Sbjct: 413 GKMEEANKVFQRM-KFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAV 471
Query: 204 -VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
Y Q +G EAL +F++M ++ TL S+L+A S+ L+ G + H + IK
Sbjct: 472 ITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFIL 531
Query: 263 HQNS--------HIGSGLIDLYAKCSGDMRDCMKVFEEI-PQP-DLVLWNTMISGYSQKE 312
+ + + +GLID+YAKC K+F+ + P+ D+V W MI GY+Q
Sbjct: 532 NLDGPDPGADDLKVINGLIDMYAKCQ-STEVARKMFDSVSPKDRDVVTWTVMIGGYAQHG 590
Query: 313 EYSDQALGCFKKLNRV--GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ ++ AL F + ++ P+D + C + AC+ L+ G+Q+HA ++ S +
Sbjct: 591 D-ANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVML 649
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V N L+ MYSK G+++ A+ +FD MP+ N VS S++ GY HG G +ALR+F+ M +
Sbjct: 650 FVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKV 709
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P ITF+ VL AC+H+G V G +F+ M FG +P EHY+CM+DL GRAG+L +
Sbjct: 710 PLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGE 769
Query: 490 AERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAA 532
A +LI MP P + AAN L+LE N Y +L+NIYA
Sbjct: 770 AMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYAN 829
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+ +W++VA IR M+ G++K+PG SWI+ +K + F D SHP ++I+ L ++ ++
Sbjct: 830 ARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQR 889
Query: 593 MKQAGYVP----------DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
+K GYVP D+EK L HSEKLA+A+G+L+ PI + KNLRICGDC
Sbjct: 890 IKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDC 949
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H+AI +IS I EI +RD+ RFH FK+G CSC YW
Sbjct: 950 HSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 144/270 (53%), Gaps = 8/270 (2%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WN ++ + L+++M SL D YT + A +L L G HA +
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ---PDLVLWNTMISGYSQKEEYS 315
+SGF N + + ++ +Y KC G +R +F+++ DLV WN+++S Y + +
Sbjct: 287 RSGFASNVFVCNAVVSMYGKC-GALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASD-A 344
Query: 316 DQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNN 373
+ AL F K+ R PD S V ++ AC++L+ SL G+Q+H +I+ + + + V N
Sbjct: 345 NTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDD-VFVGN 403
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
A+V MY+KCG +E+A ++F RM + VS N+M+ GY+Q G AL LFE M E NI
Sbjct: 404 AVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIEL 463
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+T+ +V++ A G+ E F M D
Sbjct: 464 DVVTWTAVITGYAQRGQGCEALDVFRQMCD 493
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/707 (36%), Positives = 384/707 (54%), Gaps = 69/707 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L++C DL G+ LHA L L S +L+NH I +YS C L
Sbjct: 176 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADL------------- 222
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
ASA +LF +P+ + VS+ TL+S + AL+ F MR
Sbjct: 223 ------------------ASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 264
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLA-IYCGFDHYASVNNSLLTCYSRNGFLDE 182
F LS A++ ++ C A GFD V ++L YS+ G L E
Sbjct: 265 RAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCGLLSE 324
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASILTAF 241
A RVF +M + KD V+W +M+ Y ++ A+ F++M L G D + S+L+A
Sbjct: 325 ACRVFDQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS 383
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVL 300
L+D H + K+GF + + LID+YAK S D+ +V + P ++V
Sbjct: 384 GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK-SMDVESASRVLKIDPGGWNVVS 442
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
+MI GY + + ++AL + +L R G P++ +F +I C+ + G Q+HA
Sbjct: 443 GTSMIDGYIETD-CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 501
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK ++ + V + LV MY KCG + + +LF+ + ++ N++I +AQHG G EA
Sbjct: 502 IKTDLIRDSF-VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREA 560
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
++ F+ M+ + I P +I FVS+L+AC+H G V EG KYF MK+ G EP+ EHYSC+ID
Sbjct: 561 IQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIID 620
Query: 480 LLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSNAVP 522
GRAG+L +A + I MP P GS L AA + ++LEP N
Sbjct: 621 TYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGI 680
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
+V L+ IYA+ G+WE+V +R+LMRD ++K PGFSW++ K+ HVF +ED SHP K+I
Sbjct: 681 HVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDI 740
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ LEE++ ++K+ GY+PD KE+ L +HSE++AVAF L+S +PI+V
Sbjct: 741 YEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIV 800
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLRIC DCH A KFI + R+I VRD RFH F +GRCSCGDYW
Sbjct: 801 KKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 228/525 (43%), Gaps = 42/525 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L++C DL G+ LHA L L S +L+NH I +YS C L++A F
Sbjct: 26 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85
Query: 64 NVFSFNVLLAAYA---------------RQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
N S+ L++ + R+ +A R +++ L +TL +++
Sbjct: 86 NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCH 145
Query: 109 CGDTESALSLFKDMREKRFDTDGFT--LSGLITA--SSNNLCLIKQLHCLAIYCGFDHYA 164
G T + + T L+ L+ + + +L + LH + G +
Sbjct: 146 SGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAS 205
Query: 165 S-VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+ + N L+T YS L A R+F M ++ VSW ++V Q+ +AL F M
Sbjct: 206 TFLANHLITMYSHCADLASALRLFAAMPR-RNAVSWTTLVSGLSQNLMHADALAAFAAMR 264
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ + L+S A +L + A GF + S L D+Y+KC G +
Sbjct: 265 RAGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLADMYSKC-GLL 322
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVIS 342
+ +VF+++PQ D V W MI GY++ + A+ F+ + R G D F V+S
Sbjct: 323 SEACRVFDQMPQKDAVAWTAMIDGYAKNGSL-EAAVLSFRDMKREGLVGADQHVFCSVLS 381
Query: 343 ACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNT 400
A L L K IH K ++V NAL+ MY+K ++E A R+ P N
Sbjct: 382 ASGGLKDGWLSKSIHCCVTKAGFELE-VAVRNALIDMYAKSMDVESASRVLKIDPGGWNV 440
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS- 459
VS SMI GY + EAL ++ + + P TF S++ CA + +G + +
Sbjct: 441 VSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 500
Query: 460 -----MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+++D F S ++D+ G+ G ++ + +L + +
Sbjct: 501 VIKTDLIRDSFVG-------STLVDMYGKCGLISLSMQLFNEIEY 538
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 40/254 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C + L G LHA +K + +++ + + +Y KCG +S + FN+
Sbjct: 477 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 536
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ ++N ++ +A+ A Q FD++ +P+ +++ +L++A + G + L
Sbjct: 537 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 596
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+E I +HY+ + ++ Y R
Sbjct: 597 KYFYSMKEAH----------------------------GIEPKEEHYSCIIDT----YGR 624
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G LDEA + EM + W S++ A G G A Q ++ G+ + +
Sbjct: 625 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHV-S 683
Query: 234 LASILTAFTSLEDL 247
L+ I + ED+
Sbjct: 684 LSGIYASLGQWEDV 697
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 15/178 (8%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+ +HA + + + N L+ MYS C +L A RLF MP N VS ++++G +
Sbjct: 39 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 98
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLS---ACAHTGKVAEGQKYFSMMKDMFG-- 466
Q+ + +AL F M + PT + + + HT + ++M +G
Sbjct: 99 QNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQR 158
Query: 467 -FEPEGE------HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA--ANHFLQL 515
+ P H + ++ GRAG L RL+ A G+ A ANH + +
Sbjct: 159 LWRPPAPAAATTVHLASLLQSCGRAGDLRRG-RLLHARLVLSGAAAASTFLANHLITM 215
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 140/371 (37%), Gaps = 78/371 (21%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEE 292
LAS+L + DL G HA L+ SG S + + LI +Y+ C+ D+ +++F
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCA-DLASALRLFAA 81
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD----DCSFVCVISACSNLS 348
+P+ + V W T++SG SQ ++D F + R G P + F + L+
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAA-FAAMRRAGVAPTRLIYETKFHNTLGPKHTLA 140
Query: 349 PSLGKQIHA-LTIKIEIRSNRI--------SVNNALVAMYSKCGNLEDARR--------- 390
S H+ T+ ++ R+ + L ++ CG D RR
Sbjct: 141 AS---HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLV 197
Query: 391 ------------------------------LFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
LF MP N VS ++++G +Q+ + +AL
Sbjct: 198 LSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADAL 257
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
F M + PT F +A A A + GF+ E S + D+
Sbjct: 258 AAFAAMRRAGVAPTR--FALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADM 315
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
+ G L++A R+ + MP +AV + + + YA +G E
Sbjct: 316 YSKCGLLSEACRVFDQMP------------------QKDAVAWTAMIDGYAKNGSLEAAV 357
Query: 541 TIRRLMRDRGV 551
R M+ G+
Sbjct: 358 LSFRDMKREGL 368
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/718 (34%), Positives = 382/718 (53%), Gaps = 82/718 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
T+ + + C R L G++LH ++L N F+ +L+NH + +Y+KCG L AH
Sbjct: 65 TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAH---- 120
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q+FD++P+ ++VS+ L+S YA G + +
Sbjct: 121 ---------------------------QMFDEMPEKNIVSWTALVSGYAQHGRSNECFRV 153
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN- 177
F+ M T+ F + +I+A + +Q+H LA+ FD V N+L+ Y ++
Sbjct: 154 FRGMLIWHQPTE-FAFASVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSC 212
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G DEA V+ MG ++ VSWNSM+ + G AL+LF +M + D TL SI
Sbjct: 213 GGADEAWNVYEAMG-FRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSI 271
Query: 238 LTAFTSLED-LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+ + D L Q IK+GF + + L+ Y+ G++ DC ++F E+ +
Sbjct: 272 FSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGR 331
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP---SLG 352
D+V W +I+ +++++ +AL F++ R PD F V+ AC+ L+ +L
Sbjct: 332 QDVVSWTGIIAAFAERD--PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALT 389
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
Q H L + E + I + NAL+ ++CG++ ++++FD+M +TVS NSM+ YA
Sbjct: 390 VQSHVLKVGFE---DDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAM 446
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG G EAL LF M + P TFV++LSAC+H G EG K F M + G P+ +
Sbjct: 447 HGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLD 503
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQL 515
HY+CM+D+LGRAG++++A+ LI+ MP P S+ A AA +L
Sbjct: 504 HYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKEL 563
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+P+N++ YV+++NI+ G++ E IRR M + V+K+PG SWIEV Q+H F +
Sbjct: 564 DPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQ 623
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
HP + I LEE+ R++K GYVP KE++L +HSEKLA+AF L++
Sbjct: 624 HPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVG 683
Query: 624 ----YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I +MKN+RIC DCHN +K S + EI VRD+ RFH FK CSC DYW
Sbjct: 684 SICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/650 (36%), Positives = 359/650 (55%), Gaps = 42/650 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N+L+ Y + R A +F I ++ S+ +++A+A+ D + F+ M
Sbjct: 9 NRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGML 68
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + +S ++A ++ + + + + + G + + V +L++ Y + G
Sbjct: 69 LQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCT 128
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A VF M +D V+W++MV AY ++ EAL LF++M + + TL S L A
Sbjct: 129 DAASVFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDAC 187
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
SL DL G H + G +G+ L++LY KC G + + F +I + ++V W
Sbjct: 188 ASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC-GRIEAAAEAFGQIVEKNVVAW 246
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-----SLGKQIH 356
+ + + Y++ + D A+ +++ G P+ +FV V+ AC+ ++ + ++IH
Sbjct: 247 SAISAAYARNDRNRD-AIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIH 305
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
L +E + + V ALV MYSKCGNL A +FD++ + V NS+IA AQHG
Sbjct: 306 VLGGGLE---SDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQT 362
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+AL LFE M + PT ITF SVL AC+H G + +G+K+F G PE EH+ C
Sbjct: 363 EKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGC 422
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSN 519
M+DLLGRAG + D+E L+ MPF P + A+ AA + QL+P
Sbjct: 423 MVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRK 482
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
PYV+L+N+YA +G+W +VA +R+ M+ K+ G SWIEVK ++H F++ D HP I
Sbjct: 483 RAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRI 542
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EIH L+ +++ MK AGYVPD KE + +HSEKLA+AF LL+T G P
Sbjct: 543 GEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSP 602
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V+KNLR+C DCH A KFIS + REI VRD RFH F++G CSCGDYW
Sbjct: 603 IRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 23/276 (8%)
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G+ +N + + LIDLY KC D + VF I ++ W M++ +++ ++ D+
Sbjct: 5 GWIRNRFLCNLLIDLYTKCD-RFDDALAVFHGIQSKNVFSWTMMLAAFAENRDF-DRCWL 62
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F+ + G +P + +SAC++ ++G+ I + I I V ALV++Y
Sbjct: 63 FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESI-VQTALVSLY 121
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
K G+ DA +F RM + V+ ++M+A YA++G EAL LF M + P +T V
Sbjct: 122 GKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLV 181
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S L ACA G + G ++ G + + +++L G+ G+ IEA
Sbjct: 182 SGLDACASLGDLRSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGR-------IEA--- 230
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
AA F Q+ N V + ++ YA + +
Sbjct: 231 --------AAEAFGQIVEKNVVAWSAISAAYARNDR 258
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 33/299 (11%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C DL +G +H + + + LY KCG + AA AF Q NV
Sbjct: 184 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNV 243
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+++ + AAYAR R A ++ ++ L +T + D +AL + + E+
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+H L G + V +L+ YS+ G L A
Sbjct: 304 -------------------------IHVLG--GGLESDVYVLTALVNMYSKCGNLALAGN 336
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F ++ + D V WNS++ QH + +AL+LF+ M L + T S+L A +
Sbjct: 337 MFDKIAHL-DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAG 395
Query: 246 DLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLW 301
L G + I F + H G ++DL + +G + D + +P +P V W
Sbjct: 396 MLDQGRKHFVSFIGDHGIFPEAEHFGC-MVDLLGR-AGWIVDSEDLLLHMPFEPHPVAW 452
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/646 (36%), Positives = 364/646 (56%), Gaps = 36/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F + L+ AY+ ++ AR++FD I D V++ ++S Y++ E+ L +F MR
Sbjct: 565 NAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMR 624
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F L+ ++ A+ +++ L K +H ++ +D V +LL Y++ G ++
Sbjct: 625 VAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIE 684
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A R+ +EM D + W+ M+ Y Q + +A +LF M+ + + ++L+S+L A
Sbjct: 685 DA-RLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQAC 743
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
++ L G Q H H IK G +G+ LIDLYAKCS DM +++F + + V W
Sbjct: 744 ANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCS-DMESSLEIFSSLRDVNEVSW 802
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTI 360
NT+I GYS K + + AL F+++ ++ V+ AC S S + Q+H L
Sbjct: 803 NTIIVGYS-KSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIE 861
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K S+ I V+N+L+ Y+KCG + DAR +F+ + E + VS N++I+GYA HG A
Sbjct: 862 KSTFNSDTI-VSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQ 920
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+ M + +I +ITFV++LS C TG V++G F M+ G EP EHY+C++ L
Sbjct: 921 ELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRL 980
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPY 523
LGRAG+L DA I +P P ++ +A A L++EP + Y
Sbjct: 981 LGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTY 1040
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+Y+A+G ++VA R+ MR+ GV+K+PG SW+E+K ++H F HP ++ I+
Sbjct: 1041 VLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVIN 1100
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
LE ++ K + GYVPD K + L HSE+LA+A+GL+ T G PI +M
Sbjct: 1101 AMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIM 1160
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR C DCH K IS I +EI VRD RFH F++G CSCGDYW
Sbjct: 1161 KNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 237/438 (54%), Gaps = 10/438 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F NVLL Y + SA ++FD +P+ ++VS+ TL+ +A G+ E A +LF+ +R
Sbjct: 464 DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + F L+ + + + + L L +H A G D A V ++L+ YS G +
Sbjct: 524 WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVS 583
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A+RVF + KD V+W +MV Y ++ LQ+F +M L+ + L S+L A
Sbjct: 584 DARRVFDGIVG-KDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAA 642
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L +V G HA +K+ + H+ L+D+YAKC G++ D FE + D++LW
Sbjct: 643 VCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKC-GNIEDARLAFEMVTNDDVILW 701
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
+ MIS Y+Q + ++QA F ++ R P++ S V+ AC+N+ LGKQIH I
Sbjct: 702 SLMISRYAQCNQ-NEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAI 760
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
KI S + V NAL+ +Y+KC ++E + +F + + N VS N++I GY++ G G AL
Sbjct: 761 KIGHES-ELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAAL 819
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAE-GQKYFSMMKDMFGFEPEGEHYSCMID 479
+F M ++P T +T+ SVL ACA T + GQ + + K F + + +ID
Sbjct: 820 SVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSN--SLID 877
Query: 480 LLGRAGKLTDAERLIEAM 497
+ G + DA + E +
Sbjct: 878 SYAKCGCIRDAREIFETL 895
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
+HA + +F N L+ YA+ + S+ ++F + + VS+NT+I Y+ G E
Sbjct: 757 NHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGE 816
Query: 114 SALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
+ALS+F++MR + T S ++ AS+ ++ + Q+HCL F+ V+NSL+
Sbjct: 817 AALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLI 876
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
Y++ G + +A+ +F + E D VSWN+++ Y H + A +LF M + +
Sbjct: 877 DSYAKCGCIRDAREIFETLKEC-DLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKAND 935
Query: 232 YTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T ++L+ S + GL F + + G + + ++ L + +G + D +
Sbjct: 936 ITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGR-AGRLNDALNFI 994
Query: 291 EEIPQ-PDLVLWNTMIS 306
+IP P ++W ++S
Sbjct: 995 GDIPSAPSAMVWRALLS 1011
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 11/288 (3%)
Query: 215 ALQLFQ-EMVSLQL---GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHI 268
ALQ + E+ SL G+D Y A +L + D GG H H+++SG +
Sbjct: 408 ALQWLEDELTSLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFC 467
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+++Y K G +VF+ +P+ ++V + T++ G++ + E+ ++A F++L
Sbjct: 468 ANVLLNMYTKV-GPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEF-EEASALFQRLRWE 525
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G+ + V+ + L +HA K+ N V +AL+ YS CG + D
Sbjct: 526 GHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAF-VGSALIDAYSMCGVVSD 584
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
ARR+FD + + V+ +M++ Y+++ L++F M SVL A
Sbjct: 585 ARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVC 644
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
V G+ + ++ E Y ++D+ + G + DA E
Sbjct: 645 LSSVVLGKGIHACSVKTL-YDTERHVYGALLDMYAKCGNIEDARLAFE 691
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C + +H L K+ +SN I Y+KCGC+ A F
Sbjct: 836 TYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETL 895
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
+ ++ S+N +++ YA + A A++LFD + + + +++ L+S G L
Sbjct: 896 KECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGL 955
Query: 117 SLFKDMR 123
SLF MR
Sbjct: 956 SLFDSMR 962
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/713 (35%), Positives = 376/713 (52%), Gaps = 109/713 (15%)
Query: 71 LLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDM--REKR 126
L++AYA R+ + FD +P + D V +N +ISA+A A+S+F+ + +
Sbjct: 95 LVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDS 154
Query: 127 FDTDGFTLSGLITASS--NNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGF 179
D ++ + L++A ++L + QLHC G SV+N+L+ Y + G
Sbjct: 155 LRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGV 214
Query: 180 LDEAKRVFYEMGEIKDE-------------------------------VSWNSMVVAYGQ 208
+A++V EM E KDE V WN+M+ Y Q
Sbjct: 215 TRDARKVLDEMPE-KDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQ 273
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK--SGFHQNS 266
EA +LF+ MVS ++ D +T S+L+A + + G H I+ F +
Sbjct: 274 SGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEA 333
Query: 267 --HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ-------------- 310
+ + L+ LY+K SG + K+F+ + D+V WNT++SGY +
Sbjct: 334 ALPVNNALVTLYSK-SGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392
Query: 311 --KEEYS--------------DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
K E S + AL F ++ P D ++ ++AC L GK
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q+HA ++ ++ S NAL+ MY++CG ++DAR +F MP ++VS N+MI+ QH
Sbjct: 453 QLHAHLVQCGFEASN-SAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQH 511
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G EAL LF+ M+ I P I+F+++L+AC H G V +G +YF M+ FG P +H
Sbjct: 512 GHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDH 571
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLE 516
Y+ +IDLLGRAG++ +A LI+ MPF P G + L AA+ ++
Sbjct: 572 YARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMV 631
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + Y++L+N Y+A+G+W + A +R+LMRDRGV+K+PG SWIEV ++HVF+ D H
Sbjct: 632 PEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKH 691
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P E++ +LE + KM++ GYVPD KE L HSE+LAV+FGLL
Sbjct: 692 PDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPA 751
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V+KNL+ICGDCH A+ F+S GREI VRD RFH FKDG CSCG+YW
Sbjct: 752 GATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK---NLVPFSAY-LSNHFILLYSKCGCLSAAHHA 56
TF +L C + GKS+H +++ + VP +A ++N + LYSK G ++ A
Sbjct: 298 TFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKI 357
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F+ +V S+N +L+ Y + +A ++F ++P +S+ ++S Y G E AL
Sbjct: 358 FDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDAL 417
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCY 174
LF MR + +T +G + A L KQLH + CGF+ S N+LLT Y
Sbjct: 418 KLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMY 477
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+R G + +A+ VF M + D VSWN+M+ A GQH G EAL+LF +MV+ + D +
Sbjct: 478 ARCGAVKDARLVFLVMPNV-DSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISF 536
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFE 291
+ILTA + G Q+ + + G + LIDL + G+ RD +K
Sbjct: 537 LTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMP 596
Query: 292 EIPQPDLVLWNTMISG 307
P P +W ++SG
Sbjct: 597 FEPTP--AIWEAILSG 610
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/742 (34%), Positives = 395/742 (53%), Gaps = 105/742 (14%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQH---------ANVFSFNVLLAAYARQLRIASARQLF 88
+HF L Y+ C + + H +NVF N L+A Y+R + A +F
Sbjct: 148 DHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVF 207
Query: 89 DQIPQP---DLVSYNTLISAYADCGDTESALSLFKDM----REKRFD--TDGFTLSGLIT 139
D+I + D++S+N++++A+ + +AL LF +M EK + +D ++ ++
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILP 267
Query: 140 A--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A S L IK++H AI G A V N+L+ Y++ G +++A +VF M E KD V
Sbjct: 268 ACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM-EFKDVV 326
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM-------------------------- 231
SWN+MV Y Q A +LF+ M + LD+
Sbjct: 327 SWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQM 386
Query: 232 ---------YTLASILTAFTSLEDLVGGLQFHAHLIKSGF------------HQNSHIGS 270
T+ S+L+A SL L G++ HA+ +K ++ + +
Sbjct: 387 ILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYN 446
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
LID+Y+KC + +F+ IP + ++V W MI GY+Q + S+ AL F ++
Sbjct: 447 ALIDMYSKCRS-FKAARSIFDSIPRRERNVVTWTVMIGGYAQYGD-SNDALKIFSEMISK 504
Query: 329 GYH--PDDCSFVCVISACSNLSP-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGN 384
Y P+ + C++ AC++L+ +GKQIHA +T E + V N L+ MYSKCG+
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
++ AR +FD MP+ N VS SM++GY HG G EAL +F+ M + P +I+F+ +L A
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
C+H+G V +G YF +M+ + EHY+C+IDLL R G+L A + I+ MP P ++
Sbjct: 625 CSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV 684
Query: 505 -----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
A A N + ++ N Y +++NIYA + +W++VA IR+LM+
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMK 744
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
G++K+PG SW++ KK F D SHP+ EI++ LE + ++K GYVP
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804
Query: 601 ---DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
D+EK L HSEKLA+A+GLL+TS G PI + KNLR+CGDCH+A +IS I EI
Sbjct: 805 DVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 864
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD+ RFH FK+G CSCG YW
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 18/244 (7%)
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+G+G++ Y C G +D + V E + V WN ++ + KE + D+A+G ++ R
Sbjct: 85 LGTGVVASYLAC-GATKDALSVLERVTPSPAVWWNLLVREH-IKEGHLDRAIGVSCRMLR 142
Query: 328 VGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G PD + + AC L S G+ +H L SN + V NALVAMYS+CG+LE
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESN-VFVCNALVAMYSRCGSLE 201
Query: 387 DARRLFDRMPEH---NTVSLNSMIAGYAQHGIGMEALRLFEWM------LETNIPPTNIT 437
DA +FD + + +S NS++A + + AL LF M TN I+
Sbjct: 202 DASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIIS 261
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC--MIDLLGRAGKLTDAERLIE 495
V++L ACA + + ++ S F + + C +ID + G + DA ++
Sbjct: 262 IVNILPACASLKALPQIKEIHSYAIRNGTF---ADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 496 AMPF 499
M F
Sbjct: 319 VMEF 322
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 250/716 (34%), Positives = 363/716 (50%), Gaps = 74/716 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C DL G+ +HAL + + L+N I +Y KCG
Sbjct: 43 TFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCG------------ 90
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
RI AR +F+ + D VS+N+LI+ Y G + L L
Sbjct: 91 -------------------RIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLV 131
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI----KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + + + L + A +N K LH A+ G D V +LL Y++
Sbjct: 132 KMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAK 191
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----GLEALQLFQEMVSLQLGLDM 231
G L++A ++F M + + V +N+M+ + Q EA+ LF EM S +
Sbjct: 192 IGDLEDATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSE 250
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+T +SIL A +++E G Q HA + K + IG+ L++LY+ SG + D +K F
Sbjct: 251 FTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS-LSGSIEDGLKCFH 309
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
P+ D+V W ++I G+ Q ++ + L F +L G PD+ + ++SAC+NL+
Sbjct: 310 STPKLDVVSWTSLIVGHVQNGQF-EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVK 368
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+QIHA IK I N + N+ + MY+KCG+++ A F + VS + MI+
Sbjct: 369 SGEQIHAYAIKTGI-GNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSN 427
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQHG EA+ LFE M + I P +ITF+ VL AC+H G V EG +YF +MK G P
Sbjct: 428 AQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPN 487
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFL 513
+H +C++DLLGRAG+L +AE I F + ++ A +
Sbjct: 488 VKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVI 547
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+LEP A YV+L NIY +G IR LM+DRGV+K+PG SWIEV +H FVA D
Sbjct: 548 ELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGD 607
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLS 621
SHP + I+ LEEM ++K+ Y+ +K + +HSEKLAV FG++S
Sbjct: 608 RSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIIS 667
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ VMKNLR C CH +K S + REI +RD RFH F+DG CSCGDYW
Sbjct: 668 LPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLI 148
+P+ ++VS+N+LIS Y G ++LFK+ R D FT S ++ +L L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+ +H L G + NSL+ Y + G +D A+ VF E+ D VSWNS++ Y +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL-DSVSWNSLIAGYVR 119
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTA----FTSLEDLVGGLQFHAHLIKSGFHQ 264
E L+L +M+ L L+ Y L S L A F+S + G H +K G
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSS--SIECGKMLHGCAVKLGLDL 177
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE----EYSDQALG 320
+ +G+ L+D YAK GD+ D K+F+ +P P++V++N MI+G+ Q E E++++A+
Sbjct: 178 DVVVGTALLDTYAKI-GDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 236
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ G P + +F ++ ACS + GKQIHA K ++S+ + NALV +Y
Sbjct: 237 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEF-IGNALVELY 295
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
S G++ED + F P+ + VS S+I G+ Q+G L LF +L + P T
Sbjct: 296 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355
Query: 440 SVLSACAHTGKVAEGQK 456
+LSACA+ V G++
Sbjct: 356 IMLSACANLAAVKSGEQ 372
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 16/315 (5%)
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
++ VSWNS++ Y Q E + LF+E L LD +T ++ L+ DL G
Sbjct: 4 RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLI 63
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
HA + SG + + LID+Y KC G + VFE + D V WN++I+GY +
Sbjct: 64 HALITVSGLGGPVLLTNSLIDMYCKC-GRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSL--GKQIHALTIKIEIRSNRIS 370
+D+ L K+ R G + + + + AC SN S S+ GK +H +K+ + + +
Sbjct: 123 -NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD-VV 180
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ-----HGIGMEALRLFEW 425
V AL+ Y+K G+LEDA ++F MP+ N V N+MIAG+ Q EA+ LF
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY--SCMIDLLGR 483
M + P+ TF S+L AC+ G++ + +F + + + + + +++L
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHA---QIFKYNLQSDEFIGNALVELYSL 297
Query: 484 AGKLTDAERLIEAMP 498
+G + D + + P
Sbjct: 298 SGSIEDGLKCFHSTP 312
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSL 351
+P+ ++V WN++ISGY+Q Y + + FK+ D +F +S C L L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYH-EVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRL 59
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+ IHAL I + + + N+L+ MY KCG ++ AR +F+ E ++VS NS+IAGY
Sbjct: 60 GRLIHAL-ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 118
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT-GKVAEGQKYFSMMKDMFGFEPE 470
+ G E LRL ML + + S L AC E K G + +
Sbjct: 119 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 178
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAA-NHFLQLE 516
+ ++D + G L DA ++ + MP +P + A FLQ+E
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAGFLQME 224
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 245/712 (34%), Positives = 385/712 (54%), Gaps = 77/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C R++ G +H L LK + Y++ I LY + G
Sbjct: 155 TFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGA----------- 200
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +AR LFD++P D+ S+N +IS Y G+ + AL+L
Sbjct: 201 --------------------VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD 240
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R D T+ L++A + + +H +I G + V+N L+ Y+ G
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L + ++VF M ++D +SWNS++ AY + + L A+ LFQEM ++ D TL S+
Sbjct: 297 SLKDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLA 355
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ + L ++ ++ G F ++ IG+ ++ +YAK G + VF +P D
Sbjct: 356 SILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL-GLVDSARAVFNWLPNKD 414
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVG--YHPDDCSFVCVISACSNLSP-SLGKQ 354
++ WNT+ISGY+Q ++ +A+ + + G + ++V V+ ACS G +
Sbjct: 415 VISWNTIISGYAQNG-FASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMK 473
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K + + + V +L MY KCG L+DA LF ++P N+V N++IA + HG
Sbjct: 474 LHGRLLKNGLYLD-VFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHG 532
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G +A+ LF+ ML+ + P +ITFV++LSAC+H+G V EG+ F MM+ +G P +HY
Sbjct: 533 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHY 592
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEP 517
CM+DL GRAG+L A I++MP P G++ L A+ H ++EP
Sbjct: 593 GCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 652
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ +V+L+N+YA++GKWE V IR + +G++K PG+S +EV ++ VF + +HP
Sbjct: 653 EHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHP 712
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
M +E++ L + K+K GYVPD KE L+ HSE+LA+AF L++T
Sbjct: 713 MYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAK 772
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+CGDCH+ KFIS I REI VRD+ RFH FK+G CSCGDYW
Sbjct: 773 TTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 242/509 (47%), Gaps = 35/509 (6%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
CL A N Q NV L+ Y +A AR FD I D+ ++N +IS Y
Sbjct: 72 CLHARLVVSNAIQ--NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGR 129
Query: 109 CGDTESALSLFK-DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G + + F M D T ++ A N+ ++HCLA+ GF V
Sbjct: 130 AGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA-CRNVTDGNKIHCLALKFGFMWDVYVA 188
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
SL+ Y R G + A+ +F EM +D SWN+M+ Y Q EAL L + +
Sbjct: 189 ASLIHLYCRYGAVVNARILFDEM-PTRDMGSWNAMISGYCQSGNAKEALTLSDGLRA--- 244
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+D T+ S+L+A T D G+ H++ IK G + + LIDLYA+ G ++DC
Sbjct: 245 -MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE-FGSLKDCQ 302
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
KVF+ + DL+ WN++I Y E+ +A+ F+++ PD + + + S S L
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQ-PLRAILLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 348 SPSLG-KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + T++ I++ NA+V MY+K G ++ AR +F+ +P + +S N++
Sbjct: 362 GEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTI 421
Query: 407 IAGYAQHGIGMEALRLFEWMLETN--IPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKD 463
I+GYAQ+G EA+ ++ M E I T+VSVL AC+ G + +G K + ++K+
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 481
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPY 523
G + + + D+ G+ G+L DA L F Q+ N+VP+
Sbjct: 482 --GLYLDVFVGTSLADMYGKCGRLDDALSL------------------FYQIPRVNSVPW 521
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQ 552
L + G E+ + + M D GV+
Sbjct: 522 NTLIACHGFHGHGEKAVMLFKEMLDEGVK 550
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 11/260 (4%)
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
T F +L HA L+ S QN I + L++LY G++ F+ I D+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYL-GNVALARYTFDHIHNRDV 117
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKK-LNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
WN MISGY + YS + + CF + G PD +F V+ AC N++ G +IH
Sbjct: 118 YAWNLMISGYG-RAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD--GNKIHC 174
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K + + V +L+ +Y + G + +AR LFD MP + S N+MI+GY Q G
Sbjct: 175 LALKFGFMWD-VYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAK 233
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L + + + ++T VS+LSAC G G S G E E + +
Sbjct: 234 EALTLSDGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHS-YSIKHGLESELFVSNKL 288
Query: 478 IDLLGRAGKLTDAERLIEAM 497
IDL G L D +++ + M
Sbjct: 289 IDLYAEFGSLKDCQKVFDRM 308
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/615 (36%), Positives = 347/615 (56%), Gaps = 72/615 (11%)
Query: 94 PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHC 153
P +V +N L+ YA CG A +F +M + +LC
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEM------------------PNRDLCSW----- 154
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
N ++ Y+ G L+EA+++F EM E KD SW +MV Y + +
Sbjct: 155 --------------NVMVNGYAEVGLLEEARKLFDEMTE-KDSYSWTAMVTGYVKKDQPE 199
Query: 214 EALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L+ M + +++T++ + A +++ + G + H H++++G + + S L
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+D+Y KC G + + +F++I + D+V W +MI Y + + + F +L P
Sbjct: 260 MDMYGKC-GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR-EGFSLFSELVGSCERP 317
Query: 333 DDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
++ +F V++AC++L+ LGKQ+H ++ + +++LV MY+KCGN+E A+ +
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA-SSSLVDMYTKCGNIESAKHV 376
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
D P+ + VS S+I G AQ+G EAL+ F+ +L++ P ++TFV+VLSAC H G V
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------- 501
+G ++F + + +HY+C++DLL R+G+ + +I MP P
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 502 -----GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
G+I L +AA ++EP N V YV +ANIYAA+GKWEE +R+ M++ GV K+
Sbjct: 497 GCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DK 602
PG SW E+K++ HVF+A D SHPM +I +L E+ +KMK+ GYVP K
Sbjct: 557 PGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQK 616
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
E+ LV+HSEKLAVAF +LST G I V KNLR C DCH AIKFIS I R+ITVRD+ R
Sbjct: 617 EENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTR 676
Query: 663 FHCFKDGRCSCGDYW 677
FHCF++G+CSCGDYW
Sbjct: 677 FHCFENGQCSCGDYW 691
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
P ++ +I CS GK++H I+ I + N L+ MY+KCG+L DAR+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHE-HIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FD MP + S N M+ GYA+ G+ EA +LF+ M E + + ++ ++++ +
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD----SYSWTAMVTGYVKKDQ 197
Query: 451 VAEGQKYFSMMKDMFGFEP 469
E +S+M+ + P
Sbjct: 198 PEEALVLYSLMQRVPNSRP 216
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/703 (35%), Positives = 378/703 (53%), Gaps = 72/703 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK CV LV GK +H K +++ + LYS+ G L AH
Sbjct: 126 TFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH------ 176
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F +P D+ S+N +IS + G+ AL +
Sbjct: 177 -------------------------KVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLN 211
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D T++ + + A S+++ +H + G D V+N+L+ YS+ G
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A+ VF +M E++D VSWNS++ AY Q+ + AL+ F+ M + D+ T+ S+
Sbjct: 272 RLQDAQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ F+ L D +I+ + ++ IG+ L+++YAK G M VF+++P+ D
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL-GYMNCAHTVFDQLPRKD 389
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSP-SLGKQI 355
+ WNT+++GY+Q + +A+ + + P+ ++V +I A S++ G +I
Sbjct: 390 TISWNTLVTGYTQNG-LASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA IK + + + V L+ +Y KCG LEDA LF +P +V N++IA HG
Sbjct: 449 HAKLIKNSLYLD-VFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGR 507
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EAL+LF+ ML + +ITFVS+LSAC+H+G V EGQK F +M+ +G +P +HY
Sbjct: 508 GEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYG 567
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPS 518
CM+DLLGRAG L A L+ MP P + A++ L+++
Sbjct: 568 CMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE 627
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YV+L+NIYA + KWE V +R L RDRG++K PG+S + V + VF + +HP
Sbjct: 628 NVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPK 687
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
EI+ L+ +S KMK GYVPD KE+ L HSE+LA+AFG++ST
Sbjct: 688 YTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRS 747
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
PI + KNLR+CGDCHNA K+IS I+ REI VRD+ RFH FKDG
Sbjct: 748 PIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 242/477 (50%), Gaps = 31/477 (6%)
Query: 40 FILLYSKCGCLSAAH--HA----FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ 93
F L++ C ++A HA F ++Q N+ L+ Y I+ +R FD I +
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGKSQ--NIVLSTKLINLYVTHGDISLSRSTFDYIHK 82
Query: 94 PDLVSYNTLISAYADCGDTESALS----LFKDMREKRFDTDGFTLSGLITASSNNLCLIK 149
++ S+N++ISAY G A++ LF D +T ++ A + L K
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS-LVDGK 141
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
++HC GF+ V SL+ YSR G LD A +VF +M +KD SWN+M+ + Q+
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM-PVKDVGSWNAMISGFCQN 200
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
AL + M + +D T+ASIL +D++ G+ H H++K G + +
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ LI++Y+K G ++D VF+++ DLV WN++I+ Y Q + S AL FK + G
Sbjct: 261 NALINMYSKF-GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPS-TALRFFKGMQLGG 318
Query: 330 YHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
PD + V + S S LS + + I I+ E + + NALV MY+K G + A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAH 447
+FD++P +T+S N+++ GY Q+G+ EA+ + M E + P T+VS++ A +H
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438
Query: 448 TGKVAEGQKYF------SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G + +G K S+ D+F +C+IDL G+ G+L DA L +P
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVFV-------ATCLIDLYGKCGRLEDAMSLFYEIP 488
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 251/710 (35%), Positives = 376/710 (52%), Gaps = 70/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G DL G+ +H ++ + N I +Y KCG
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCG------------ 244
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I SAR +FD++P+ D +S+N +IS Y + L LF
Sbjct: 245 -------------------DIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF 285
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE D D T++ +I+A + L +++H I GF SVNNSL+ +S G
Sbjct: 286 MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVG 345
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
DEA+ VF +M E KD VSW +M+ Y ++ +A++ + M + D T+AS+L
Sbjct: 346 CWDEAEMVFSKM-EFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G+ H ++G + + LID+Y+KC + ++VF IP ++
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC-IDKALEVFHRIPNKNV 463
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W ++I G S +AL F+++ + P+ + V V+SAC+ + S GK+IHA
Sbjct: 464 ISWTSIILGLRLNYR-SFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHA 521
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NAL+ MY +CG +E A F+ E + S N ++ GYAQ G G
Sbjct: 522 HALRTGLGFDGF-LPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGG 579
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ LF M+E+++ P ITF S+L AC+ +G V +G +YF M+ F P +HY+ +
Sbjct: 580 LAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV 639
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGRAG+L DA I+ MP +P + AA H +++ +
Sbjct: 640 VDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSV 699
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA SGKW+EVA +R++MR+ + PG SW+EV Q+H F+ D HP IK
Sbjct: 700 GYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIK 759
Query: 581 EIHNYLEEMSRKMKQAGYVPDKEKR-----------LVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ LE KM+ G K+ R HSE+LA+AFGL++T G PI
Sbjct: 760 EINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIW 819
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD--YW 677
V KNL +C +CHN +KFIS + R I+VRDT +FH FKDG CSCGD YW
Sbjct: 820 VTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 179/363 (49%), Gaps = 17/363 (4%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ-------LH 152
N+LI GD E AL M+E + + T L+ LC K+ +H
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALL-----RLCEWKRAASEGSRVH 117
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
+ N+LL+ + R G L EA VF +M E +D SWN +V Y +
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAE-RDLFSWNVLVGGYAKAGYF 176
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L+ M+ + + D+YT +L L DL G + H H+I+ GF + + + L
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
I +Y KC GD+ VF+ +P+ D + WN MISGY + + + L F + P
Sbjct: 237 ITMYVKC-GDIFSARLVFDRMPRRDRISWNAMISGYFEN-DVCLEGLRLFFMMREFFVDP 294
Query: 333 DDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D + VISAC L LG+++H IK + +SVNN+L+ M+S G ++A +
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVA-EVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F +M + VS +MI+GY ++G+ +A+ + M + P IT SVLSACA G +
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 452 AEG 454
+G
Sbjct: 414 DKG 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNA 374
++AL + + ++ +++ ++ C + S G ++H+ K R + + NA
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLG-VRLGNA 134
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++M+ + G+L +A +F +M E + S N ++ GYA+ G EAL L+ ML I P
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 435 NITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
TF VL C +A G++ + +++ +GFE + + + +I + + G + A +
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIR--YGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 494 IEAMP 498
+ MP
Sbjct: 253 FDRMP 257
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/665 (35%), Positives = 361/665 (54%), Gaps = 79/665 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK--RFDTDGFTLSGLITAS 141
ARQLFD IPQPD + +TLISA G + A+ ++ ++E+ + D F + A
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 176
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
S + +K++H A CG V N+L+ Y + ++ A+RVF ++ ++D VSW S
Sbjct: 177 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL-VVRDVVSWTS 235
Query: 202 MVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+ Y G R+G++ +F+EM + + T++SIL A L+DL G + H +
Sbjct: 236 LSSCYVKCGFPRKGMD---VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 292
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY---- 314
+ G N + S L+ LYAKC +R+ VF+ +P D+V WN +++ Y + +EY
Sbjct: 293 RHGMVVNLFVCSALVSLYAKCLS-VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 351
Query: 315 ------------------------------SDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
S++A+ F+K+ ++G+ P++ + ++ AC
Sbjct: 352 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPAC 411
Query: 345 S---NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
S NL +GK+IH + + ++ AL+ MY+KCG+L +R +FD M + V
Sbjct: 412 SFSENLR--MGKEIHCYVFR-HWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVV 468
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ N+MI A HG G EAL LF+ ML + + P ++TF VLS C+H+ V EG + F+ M
Sbjct: 469 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 528
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA------------- 508
EP+ HYSC++D+ RAG+L +A + I+ MP P + A A
Sbjct: 529 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 588
Query: 509 ----ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A ++EP+N YV L NI + W E + +R LM++RG+ K PG SW++V
Sbjct: 589 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGN 648
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
++H FV D S+ +I+N+L+E+ KMK AGY PD K + L +HSEK
Sbjct: 649 KVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEK 708
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LAVAFG+L+ + I V KNLRICGDCHNAIK++S + G I VRD+ RFH FK+G CS
Sbjct: 709 LAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCS 768
Query: 673 CGDYW 677
C D W
Sbjct: 769 CKDLW 773
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 160/323 (49%), Gaps = 26/323 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C +DL +GK +H +++ + + ++ + + LY+KC + A F+
Sbjct: 267 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 326
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
H +V S+N +L AY + LF ++ + D ++N +I + G +E A+
Sbjct: 327 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 386
Query: 117 SLFKDMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYA----SVNNSL 170
+F+ M++ F + T+S ++ A S NL + K++HC F H+ + +L
Sbjct: 387 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYV----FRHWKVGDLTSTTAL 442
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y++ G L+ ++ VF +M KD V+WN+M++A H G EAL LF +M+ ++ +
Sbjct: 443 LYMYAKCGDLNLSRNVF-DMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 501
Query: 231 MYTLASILTAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
T +L+ + + G+Q HL++ + S + +D+Y++ +G + +
Sbjct: 502 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV----VDIYSR-AGRLNE 556
Query: 286 CMKVFEEIP-QPDLVLWNTMISG 307
K + +P +P W +++
Sbjct: 557 AYKFIQGMPMEPTASAWGALLAA 579
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 205/488 (42%), Gaps = 85/488 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F K C D + K +H + V ++ N I Y KC C+ A
Sbjct: 166 VFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA------- 218
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R++FD + D+VS+ +L S Y CG + +F+
Sbjct: 219 ------------------------RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFR 254
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + T+S ++ A + +L K++H A+ G V ++L++ Y++
Sbjct: 255 EMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCL 314
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE--------------------------- 211
+ EA+ VF M +D VSWN ++ AY +++E
Sbjct: 315 SVREARMVFDLMPH-RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVI 373
Query: 212 --------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
EA+++F++M + + T++SIL A + E+L G + H ++ +
Sbjct: 374 GGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKV 433
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+ + L+ +YAKC GD+ VF+ + + D+V WNTMI + +AL F
Sbjct: 434 GDLTSTTALLYMYAKC-GDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN-GKEALFLFD 491
Query: 324 KLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIK---IEIRSNRISVNNALVAMY 379
K+ P+ +F V+S CS+ G QI + +E +N S +V +Y
Sbjct: 492 KMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS---CVVDIY 548
Query: 380 SKCGNLEDARRLFDRMPEHNTVS-LNSMIAG---YAQHGIG-MEALRLFEWMLETNIPPT 434
S+ G L +A + MP T S +++A Y + + A +LFE +E N P
Sbjct: 549 SRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE--IEPNNPGN 606
Query: 435 NITFVSVL 442
++ ++L
Sbjct: 607 YVSLFNIL 614
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
SH+G LI + A GD ++F+ IPQPD +T+IS + S++A+ + L
Sbjct: 98 SHLGLRLIRV-ALNVGDFNRARQLFDNIPQPDPTTCSTLISALTT-HGLSNEAIKIYSSL 155
Query: 326 NRVGYHPDDCSFVCVISACSNLSPSLG-KQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G PD F+ AC+ +L K++H + + S+ + V NAL+ Y KC
Sbjct: 156 QERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSD-VFVGNALIHAYGKCKC 214
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E ARR+FD + + VS S+ + Y + G + + +F M + + P +T S+L A
Sbjct: 215 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 274
Query: 445 CAHTGKVAEGQK 456
CA + G++
Sbjct: 275 CAELKDLKSGKE 286
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 361/629 (57%), Gaps = 53/629 (8%)
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLA 155
+++++I Y + S F MR + L+ AS+ + L LH
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 156 IYCGFDHYASVNNSLLTCYSR---------------NGFLDEAKRVFYEMGEIKDEVSWN 200
+ G D + N+L+ Y++ +D K+VF +M ++D VSWN
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVF-DMMPVRDVVSWN 195
Query: 201 SMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
+++ + Q+ +EAL + +EM + +L D +TL+SIL F D+ G + H + ++
Sbjct: 196 TVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVR 255
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+GF + IGS LID+YAKC+ + ++ F +P+ D + WN++I+G Q E+ D+ L
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCN-RLECSLRAFYILPRKDAISWNSIIAGCVQNGEF-DRGL 313
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
G F+++ + P SF VI AC++L+ SLG+Q+H +++ N + ++LV M
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEF-IASSLVDM 372
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+KCGN++ AR +FDR+ + + V+ ++I G A HG ++A+ LFE MLE + P + F
Sbjct: 373 YAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAF 432
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM- 497
++VL+AC+H G V EG +YF+ M+ FG P EHY+ + DLLGRAG+L +A I M
Sbjct: 433 MAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMR 492
Query: 498 PFNP-GSI----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
P GS+ A K + L ++ N YV+++NIY+A+ +W++ A
Sbjct: 493 GVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAA 552
Query: 541 TIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
+R MR +G++K P SWIEV Q+H F+A D SHP +I+ L+ + +M++ GYV
Sbjct: 553 RLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVI 612
Query: 601 D------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
D K + L +HSE+LA+A+G++ST+ G I V+KN+R+C DCH AIKFI+
Sbjct: 613 DTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFIT 672
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I GREITVRD RFH FK+G CSCGDYW
Sbjct: 673 KIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L D+ GK +H ++N ++ + I +Y+KC
Sbjct: 229 TLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCN------------ 276
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ + + F +P+ D +S+N++I+ G+ + L F+
Sbjct: 277 -------------------RLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ + S +I A ++ L L +QLH + GFD + +SL+ Y++ G
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG 377
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ VF + + +D V+W ++++ H L+A+ LF+ M+ + ++L
Sbjct: 378 NIKMARYVFDRIDK-RDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436
Query: 239 TA 240
TA
Sbjct: 437 TA 438
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 108/273 (39%), Gaps = 46/273 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F V+ C L G+ LH ++ + ++++ + +Y+KCG
Sbjct: 330 SFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG------------ 377
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I AR +FD+I + D+V++ +I A G A+SLF+
Sbjct: 378 -------------------NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFE 418
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHC-------LAIYCGFDHYASVNNSLLTC 173
+M E ++TA S+ + + I G +HYA+V + L
Sbjct: 419 NMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLL--- 475
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDM 231
R G L+EA M ++ S W+ ++ A H+ A ++ +++S+ +
Sbjct: 476 -GRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGA 534
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y L S +++ + + H+ K G +
Sbjct: 535 YVLMS--NIYSAAQRWKDAARLRIHMRKKGLKK 565
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/712 (32%), Positives = 376/712 (52%), Gaps = 72/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L C L G +H L+ ++ I +Y+KCG + A +F +
Sbjct: 107 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 166
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+H +V S+ ++AA + + A AR L+ ++ P+ ++ T+ +AY D
Sbjct: 167 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD-------- 218
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ ++G + GL+++ + V NS + +
Sbjct: 219 --------PNYLSEGKFVYGLVSSGV-----------------MESDVRVMNSAVNMFGN 253
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L +A+R+F +M + +D V+WN ++ Y Q+ EA++LF + + + T
Sbjct: 254 AGLLGDARRLFEDMVD-RDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVL 312
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L +TSL L G H + ++G+ +++ + + L+ LY +C + K+F ++
Sbjct: 313 MLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ-AWKIFVDMGSK 371
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D++ W M Y+Q + +AL F+++ G P + V V+ C++L+ G+QI
Sbjct: 372 DVITWTVMCVAYAQNG-FRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 430
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H+ I+ R + V AL+ MY KCG + +A +F++M + + + NSM+ YAQHG
Sbjct: 431 HSHIIENRFRMEMV-VETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGY 489
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
E L+LF M + ++FVSVLSA +H+G V +G +YF M F P E Y
Sbjct: 490 YDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYG 549
Query: 476 CMIDLLGRAGKLTDAERLIEAMP------------------FNPGSIALKAANHFLQLEP 517
C++DLLGRAG++ +A ++ + N A AA L+ +P
Sbjct: 550 CVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDP 609
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
S++ YV+L+N+YAA+G W+ V +R+LMR RGV+K+PG S IE+ ++H F+ D SHP
Sbjct: 610 SHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHP 669
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
I+ L+ ++ +M+ AGY+PD KE L +HSE+LA+AFGL+ST G
Sbjct: 670 RRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPG 729
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V+KNLR+C DCH A K+IS + GREI VRDT+RFH FKDGRCSC DYW
Sbjct: 730 TPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 230/470 (48%), Gaps = 19/470 (4%)
Query: 40 FILLYSKCGCLSAAHHAFNQTQHANVFSFNV-------LLAAYARQLRIASARQLFDQIP 92
F+ L +C H H F L+ YA+ + A+Q+F+ +
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQ 150
+ D+ ++ +I Y GD + AL +F M+E+ T ++ AS+ +L +
Sbjct: 67 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+H + GF+ V +L+ Y++ G + A F + E +D VSW +M+ A QH
Sbjct: 127 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHD 185
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIG 269
+ A L++ M + + TL ++ A+ L G +F L+ SG ++ +
Sbjct: 186 QFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-KFVYGLVSSGVMESDVRVM 244
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ ++++ +G + D ++FE++ D+V WN +I+ Y Q E + +A+ F +L + G
Sbjct: 245 NSAVNMFGN-AGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG-EAVRLFGRLQQDG 302
Query: 330 YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
+D +FV +++ ++L S + GK IH L + + + V AL+++Y +C A
Sbjct: 303 VKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAV-VATALMSLYGRCEAPGQA 361
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
++F M + ++ M YAQ+G EAL+LF+ M PT+ T V+VL CAH
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421
Query: 449 GKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +G++ S ++++ F E E + +I++ G+ GK+ +A + E M
Sbjct: 422 AALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKM 469
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 205/417 (49%), Gaps = 26/417 (6%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+S+ N+ +++H GF+ V L+ Y++ G + EA++VF E+ E KD +W
Sbjct: 15 SSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF-EILERKDVFAW 73
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
M+ Y Q + AL +F +M + T +IL A S E L G++ H +++
Sbjct: 74 TRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQ 133
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +G+ LI++Y KC G +R F+ + D+V W MI+ Q ++++ A
Sbjct: 134 QGFEGDVFVGTALINMYNKC-GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA-LAR 191
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAM 378
++++ G P+ + V +A + + S GK ++ L + + + + V N+ V M
Sbjct: 192 WLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGL-VSSGVMESDVRVMNSAVNM 250
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
+ G L DARRLF+ M + + V+ N +I Y Q+ EA+RLF + + + +ITF
Sbjct: 251 FGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITF 310
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
V +L+ +A+G+ ++K+ G++ + + ++ L GR EA
Sbjct: 311 VLMLNVYTSLTSLAKGKVIHELVKEA-GYDRDAVVATALMSLYGRC----------EA-- 357
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
PG +A F+ + + + + ++ YA +G +E + + M+ G ++P
Sbjct: 358 --PG----QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG--RRP 406
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 24/343 (6%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D ++L +S +++ G + H H+ GF QN+ + LI +YA+C G + + +V
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQC-GSVPEAQQV 61
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLS 348
FE + + D+ W MI Y Q+ +Y D+ALG F ++ P ++V +++AC S S
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDY-DRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G +IH ++ + + V AL+ MY+KCG++ A F R+ + VS +MIA
Sbjct: 121 LKDGMEIHGQILQQGFEGD-VFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
QH A L+ M + P IT +V +A ++EG+ + ++ E
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-ME 238
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAM------PFNPGSIALKAANH--------FLQ 514
+ + +++ G AG L DA RL E M +N I L N F +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNI-VITLYVQNENFGEAVRLFGR 297
Query: 515 LE----PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
L+ +N + +V++ N+Y + + I L+++ G +
Sbjct: 298 LQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 340
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 332 PDDCSFVCVISACSNLSPSLGKQI-HALTIKIEIRSNRISVNNA----LVAMYSKCGNLE 386
PD FV ++ CS+ K + H + +R NN L+ MY++CG++
Sbjct: 2 PDTAFFVALLQRCSS-----AKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVP 56
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+A+++F+ + + + MI Y Q G AL +F M E ++ PT +T+V++L+ACA
Sbjct: 57 EAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA 116
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
T + +G + + GFE + + +I++ + G + A
Sbjct: 117 STESLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGA 159
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/540 (39%), Positives = 318/540 (58%), Gaps = 39/540 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y + L++A ++F +M + ++ +SW +M+ AY + + +AL+L M+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
++YT +S+L + + D+ H +IK G + + S LID++AK G+ D +
Sbjct: 159 RPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL-GEPEDAL 214
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+E+ D ++WN++I G++Q SD AL FK++ R G+ + + V+ AC+ L
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LG Q H +K + + +NNALV MY KCG+LEDA R+F++M E + ++ ++M
Sbjct: 274 ALLELGMQAHVHIVKYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G AQ+G EAL+LFE M + P IT V VL AC+H G + +G YF MK ++G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AA 509
+P EHY CMIDLLG+AGKL DA +L+ M P ++ + AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ L+P +A Y +L+NIYA S KW+ V IR MRDRG++K+PG SWIEV KQ+H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAF 617
+ D SHP I E+ L ++ ++ GYVP+ E L HHSEKLA+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL++ + I + KNLRICGDCH K S + R I +RD R+H F+DG+CSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 190/364 (52%), Gaps = 9/364 (2%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L H FN +F NVL+ Y + + A QLFDQ+PQ +++S+ T+ISAY+
Sbjct: 80 GNLICRHLYFN-GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
C + AL L M + +T S ++ S N + ++ LHC I G + V
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCNGMSDVRMLHCGIIKEGLESDVFVR 197
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ +++ G ++A VF EM D + WNS++ + Q+ AL+LF+ M
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ TL S+L A T L L G+Q H H++K + Q+ + + L+D+Y KC G + D +
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC-GSLEDAL 313
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++ + D++ W+TMISG +Q YS +AL F+++ G P+ + V V+ ACS+
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 348 SPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNS 405
+ ++K + + + ++ + K G L+DA +L + M E + V+ +
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 406 MIAG 409
++
Sbjct: 433 LLGA 436
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 48/234 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G H +K L+N + +Y KCG L A FNQ
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V ++++T+IS A G ++ AL LF+
Sbjct: 320 KERDV-------------------------------ITWSTMISGLAQNGYSQEALKLFE 348
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL---------IKQLHCLAIYCGFDHYASVNNSLL 171
M+ + T+ G++ A S+ L +K+L+ G D ++
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY------GIDPVREHYGCMI 402
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ G LD+A ++ EM D V+W +++ A R + A +++++L
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/648 (36%), Positives = 357/648 (55%), Gaps = 66/648 (10%)
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIK 149
P S+ + + D A+S + +M D F ++ A S +L +
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 150 QLHCLAIYCGFDHYASV---------------------NNSLLTCYSRNGFLDEAKRVFY 188
Q+H A+ G+ + NN+L+ Y++ G +D++K +F
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ +D VSWN+M+ ++ Q EAL F+ MV + LD T+AS+L A + LE L
Sbjct: 173 SFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231
Query: 249 GGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G + HA+++++ +NS +GS L+D+Y C + +VF+ I + LWN MISG
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR-QVESGRRVFDHILGRRIELWNAMISG 290
Query: 308 YSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIKIEI 364
Y+ + ++AL F ++ +V G P+ + V+ AC S + + GK+IHA I+ +
Sbjct: 291 YA-RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNML 349
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ I+V +ALV MY+KCG L +RR+F+ MP N ++ N +I HG G EAL LF+
Sbjct: 350 ASD-ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFK 408
Query: 425 WMLET-----NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
M+ P +TF++V +AC+H+G ++EG F MK G EP +HY+C++D
Sbjct: 409 NMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVD 468
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIAL------------------KAANHFLQLEPSNAV 521
LLGRAG+L +A L+ MP + AA + L LEP+ A
Sbjct: 469 LLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVAS 528
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+NIY+++G W + +R+ MR GV+K+PG SWIE + ++H F+A D SHP ++
Sbjct: 529 HYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQ 588
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
+H +LE +S KM++ GYVPD KE L HSEKLA+AFG+L+T G I
Sbjct: 589 LHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIR 648
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLR+C DCH A KFIS I REI VRD RFH FK+G CSCGDYW
Sbjct: 649 VAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 207/414 (50%), Gaps = 40/414 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK G +DL TG+ +HA +K S ++N + +Y KCG +
Sbjct: 95 FPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD-------- 146
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F+ N L+A YA+ R+ ++ LF+ D+VS+NT+IS+++ AL+ F+
Sbjct: 147 ---KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFR 203
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRN 177
M + + DG T++ ++ A S+ L + K++H + + V ++L+ Y
Sbjct: 204 LMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNC 263
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLAS 236
++ +RVF + + E+ WN+M+ Y ++ +AL LF EM+ + L + T+AS
Sbjct: 264 RQVESGRRVFDHILGRRIEL-WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 322
Query: 237 ILTAFT-SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++ A SL + G + HA+ I++ + +GS L+D+YAKC G + +VF E+P
Sbjct: 323 VMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC-GCLNLSRRVFNEMPN 381
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKL----NRVG-YHPDDCSFVCVISACSN---L 347
+++ WN +I + ++AL FK + R G P++ +F+ V +ACS+ +
Sbjct: 382 KNVITWNVLIMACGMHGK-GEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 440
Query: 348 SPSLG-----KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
S L K H +E S+ + +V + + G LE+A L + MP
Sbjct: 441 SEGLNLFYRMKHDHG----VEPTSDHYA---CVVDLLGRAGQLEEAYELVNTMP 487
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 245/650 (37%), Positives = 354/650 (54%), Gaps = 84/650 (12%)
Query: 26 LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASAR 85
+++ V ++ +S+H + G +S A H F+ + S+N +LAAY R R+ AR
Sbjct: 128 VRDSVTYNVMISSH-----ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 182
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF+ + D++S+N L+S Y G A LF M + + +SG A ++
Sbjct: 183 GLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGY--ARRGDM 240
Query: 146 CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
++L A + +V ++ Y++NG L+EA+RVF M E ++ VSWN+MV A
Sbjct: 241 VEARRLFDAAPVRDVFTWTAV----VSGYAQNGMLEEARRVFDAMPE-RNAVSWNAMVAA 295
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y Q R EA +LF M +AS T T G+ Q
Sbjct: 296 YIQRRMMDEAKELFNMMPC-------RNVASWNTMLT------------------GYAQ- 329
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+G + + VF+ +PQ D V W M++ YSQ S++ L F ++
Sbjct: 330 --------------AGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG-CSEETLQLFIEM 374
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
R G + +F CV+S C++++ G Q+H I+ V NAL+AMY KCGN
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG-CFVGNALLAMYFKCGN 433
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EDAR F+ M E + VS N+MIAGYA+HG G EAL +F+ M T+ P +IT V VL+A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS- 503
C+H+G V +G YF M FG + EHY+CMIDLLGRAG+L +A L++ MPF P S
Sbjct: 494 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 553
Query: 504 ----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ AA +LEP NA YV+L+NIYA+SGKW + +R +M
Sbjct: 554 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 613
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
+RGV+K PGFSWIEV+ ++H F A D HP ++I+ +LE++ +MK+AGYV
Sbjct: 614 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLH 673
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
+KE L +HSEKLAVA+G+L+ G PI V+KNLR+CGDCHNA K
Sbjct: 674 DVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 723
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 162/425 (38%), Gaps = 122/425 (28%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN I + + G ++ A F + ++N +LA Y+ R+ A LF IP+PD
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
SYNTL+ A A A LF +M + D T + +I++ +N+
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANH------------ 144
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G + A R ++++ KD VSWN M+ AY ++ EA
Sbjct: 145 ---------------------GLVSLA-RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 182
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
LF D+ + ++++ +
Sbjct: 183 GLFNSRTEW----DVISWNALMSGYVQW-------------------------------- 206
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
G M + ++F+ +P D+V WN M+SGY+++
Sbjct: 207 ----GKMSEARELFDRMPGRDVVSWNIMVSGYARR------------------------- 237
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
G + A + + A+V+ Y++ G LE+ARR+FD MP
Sbjct: 238 ---------------GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP 282
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
E N VS N+M+A Y Q + EA LF M N+ N ++L+ A G + E +
Sbjct: 283 ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWN----TMLTGYAQAGMLEEAKA 338
Query: 457 YFSMM 461
F M
Sbjct: 339 VFDTM 343
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 41/247 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL TC L G LH ++ ++ N + +Y KCG + A +AF +
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N ++A YAR A ++FD + +PD ++ +++A + G E +
Sbjct: 445 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 504
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S F M H + +HY ++ R
Sbjct: 505 SYFYSMH----------------------------HDFGVTAKPEHY----TCMIDLLGR 532
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLGLDMYT 233
G L EA + +M D W +++ A HR G A + E+ G MY
Sbjct: 533 AGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG--MYV 590
Query: 234 LASILTA 240
L S + A
Sbjct: 591 LLSNIYA 597
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/674 (35%), Positives = 355/674 (52%), Gaps = 70/674 (10%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR-FDT 129
+ Y+ + AR LFD+IPQPDL ++ LISA G + A+ + D R K +
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 130 DGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
D L + A S ++ K++H AI GF + N+L+ Y + E R+
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCR-CSEGARLV 135
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+E +D +SW SM Y EAL F++M + T++SIL A T L+DL
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G + H ++++G N + S L+++YA C +R VF+ + + D V WN +I+
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCL-SIRQAQLVFDSMSRRDTVSWNVLITA 254
Query: 308 YSQKEE----------------------------------YSDQALGCFKKLNRVGYHPD 333
Y +E +++AL ++ G+ P+
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPN 314
Query: 334 DCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ V+ AC+NL S GKQIH + + ++ ALV MY+KCG+LE +RR+F
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQD-LTTTTALVFMYAKCGDLELSRRVF 373
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
M + +TVS N+MI + HG G EAL LF M+++ + P ++TF VLS C+H+ V
Sbjct: 374 SMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVD 433
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK----- 507
EG F M EP+ +H+SCM+D+L RAG+L +A I+ MP P + A
Sbjct: 434 EGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493
Query: 508 ------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
AAN ++E N YV+L+NI ++ W E + R+LMRDRGV K P
Sbjct: 494 CRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNP 553
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKE 603
G SWI+V+ ++H FV D S+ EI+ +L+ M KM+ AGY+P +KE
Sbjct: 554 GCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKE 613
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
+ L +HSEKLAVAFG+L+ + I V KNLRICGDCHNAIKF++ I G +I VRD+ RF
Sbjct: 614 EVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRF 673
Query: 664 HCFKDGRCSCGDYW 677
H F+DG CSC D+W
Sbjct: 674 HHFRDGLCSCQDFW 687
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 220/507 (43%), Gaps = 92/507 (18%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V K C RD++ K +H ++ L N I +Y KC C
Sbjct: 84 VAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG------------ 131
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
AR +F+ +P D++S+ ++ S Y +CG AL F+ M
Sbjct: 132 -------------------ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGL 172
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ T+S ++ A ++ +L +++H + G V+++L+ Y+ + +
Sbjct: 173 NGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQ 232
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL------------- 229
A+ VF M +D VSWN ++ AY ++E + L +F M+S +GL
Sbjct: 233 AQLVFDSMSR-RDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCM 291
Query: 230 ----------------------DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ T+ S+L A T+LE L GG Q H ++ + F Q+
Sbjct: 292 QNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLT 351
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ L+ +YAKC GD+ +VF + + D V WNTMI S ++AL F+++
Sbjct: 352 TTTALVFMYAKC-GDLELSRRVFSMMTKRDTVSWNTMIIATSMHGN-GEEALLLFREMVD 409
Query: 328 VGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISV------NNALVAMYSK 381
G P+ +F V+S CS+ + + + + S SV ++ +V + S+
Sbjct: 410 SGVRPNSVTFTGVLSGCSH-----SRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSR 464
Query: 382 CGNLEDARRLFDRMP-EHNTVSLNSMIAG---YAQHGIG-MEALRLFEWMLETNIPPTNI 436
G LE+A +MP E + +++ G Y +G + A RLFE +E++ P +
Sbjct: 465 AGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFE--IESDNPGNYV 522
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKD 463
++L + + +E +K +M+D
Sbjct: 523 LLSNILVSAKLWSEASETRK---LMRD 546
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 12/316 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C +DL +G+ +H ++N + + ++S+ + +Y+ C + A F+
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP----DLVSYNTLISAYADCGDTESAL 116
+ S+NVL+ AY +F ++ + S+N +I G TE AL
Sbjct: 241 SRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ M+ F + T++ ++ A +N +L KQ+H F + +L+ Y
Sbjct: 301 EVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G L+ ++RVF M + +D VSWN+M++A H G EAL LF+EMV + + T
Sbjct: 361 AKCGDLELSRRVFSMMTK-RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTF 419
Query: 235 ASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+L+ S LV G L F + ++ S ++D+ ++ +G + + + ++
Sbjct: 420 TGVLSG-CSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSR-AGRLEEAYEFIKK 477
Query: 293 IP-QPDLVLWNTMISG 307
+P +P W ++ G
Sbjct: 478 MPIEPTAGAWGALLGG 493
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 250/716 (34%), Positives = 363/716 (50%), Gaps = 74/716 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C DL G+ +HAL + + L+N I +Y KCG
Sbjct: 122 TFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCG------------ 169
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
RI AR +F+ + D VS+N+LI+ Y G + L L
Sbjct: 170 -------------------RIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLV 210
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC----LIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + + + L + A +N K LH A+ G D V +LL Y++
Sbjct: 211 KMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAK 270
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----GLEALQLFQEMVSLQLGLDM 231
G L++A ++F M + + V +N+M+ + Q EA+ LF EM S +
Sbjct: 271 IGDLEDATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSE 329
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+T +SIL A +++E G Q HA + K + IG+ L++LY+ SG + D +K F
Sbjct: 330 FTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS-LSGSIEDGLKCFH 388
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
P+ D+V W ++I G+ Q ++ + L F +L G PD+ + ++SAC+NL+
Sbjct: 389 STPKLDVVSWTSLIVGHVQNGQF-EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVK 447
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+QIHA IK I N + N+ + MY+KCG+++ A F + VS + MI+
Sbjct: 448 SGEQIHAYAIKTGI-GNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSN 506
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQHG EA+ LFE M + I P +ITF+ VL AC+H G V EG +YF +MK G P
Sbjct: 507 AQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPN 566
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFL 513
+H +C++DLLGRAG+L +AE I F + ++ A +
Sbjct: 567 VKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVI 626
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+LEP A YV+L NIY +G IR LM+DRGV+K+PG SWIEV +H FVA D
Sbjct: 627 ELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGD 686
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLS 621
SHP + I+ LEEM ++K+ Y+ +K + +HSEKLAV FG++S
Sbjct: 687 RSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIIS 746
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ VMKNLR C CH +K S + REI +RD RFH F+DG CSCGDYW
Sbjct: 747 LPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 211/401 (52%), Gaps = 12/401 (2%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+F N LL Y + A++LFD++P+ ++VS+N+LIS Y G ++LFK+ R
Sbjct: 54 LFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM 113
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D FT S ++ +L L + +H L G + NSL+ Y + G +D
Sbjct: 114 SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDW 173
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF E+ D VSWNS++ Y + E L+L +M+ L L+ Y L S L A
Sbjct: 174 ARLVFESADEL-DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACG 232
Query: 243 S--LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S + G H +K G + +G+ L+D YAK GD+ D K+F+ +P P++V+
Sbjct: 233 SNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKI-GDLEDATKIFKLMPDPNVVM 291
Query: 301 WNTMISGYSQKE----EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+N MI+G+ Q E E++++A+ F ++ G P + +F ++ ACS + GKQI
Sbjct: 292 YNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQI 351
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA K ++S+ + NALV +YS G++ED + F P+ + VS S+I G+ Q+G
Sbjct: 352 HAQIFKYNLQSDEF-IGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQ 410
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
L LF +L + P T +LSACA+ V G++
Sbjct: 411 FEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 451
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 7/295 (2%)
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L L LD T ++ T L+ G H H+IK+ F + + L+ +Y KC G+
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKC-GETD 71
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
K+F+ +P+ ++V WN++ISGY+Q Y + + FK+ D +F +S C
Sbjct: 72 VAKKLFDRMPKRNVVSWNSLISGYTQMGFYH-EVMNLFKEARMSDLRLDKFTFSNALSVC 130
Query: 345 S-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
L LG+ IHAL I + + + N+L+ MY KCG ++ AR +F+ E ++VS
Sbjct: 131 GRTLDLRLGRLIHAL-ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSW 189
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMK 462
NS+IAGY + G E LRL ML + + S L AC ++ E K
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAA-NHFLQLE 516
G + + + ++D + G L DA ++ + MP +P + A FLQ+E
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAGFLQME 303
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/649 (35%), Positives = 364/649 (56%), Gaps = 42/649 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NV N LL+ Y++ + A +F ++ + DL+S+N++++++ D G+ AL L +M
Sbjct: 294 SNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEM 353
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ R T+ T + ++A N L +K +H I G H + N+L+T Y + G +
Sbjct: 354 LQTRKATNYVTFTTALSACYN-LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+RV M + +DEV+WN+++ + ++E A++ F + + ++ T+ ++L+AF
Sbjct: 413 AQRVCKIMPD-RDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFL 471
Query: 243 SLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
S +DL+ G+ HAH++ +GF + + S LI +YA+C GD+ +F+ + + W
Sbjct: 472 SPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQC-GDLNTSNYIFDVLANKNSSTW 530
Query: 302 NTMISG---YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
N ++S Y EE AL K+ G H D SF + NL+ G+Q+H+
Sbjct: 531 NAILSANAHYGPGEE----ALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHS 586
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK SN V NA + MY KCG ++D R+ + + S N +I+ A+HG
Sbjct: 587 LIIKHGFESNDY-VLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQ 645
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A F ML+ + P ++TFVS+LSAC+H G V EG YFS M FG EH C+
Sbjct: 646 QAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCI 705
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
IDLLGRAGKLT+AE I MP P +A KAA+ +L+ S+
Sbjct: 706 IDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDD 765
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+ +N+ A++ +W +V +R+ M ++KKP SW+++K Q+ F D HP
Sbjct: 766 SAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNA 825
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ LEE+ + +++AGY+PD KE L +HSE++A+AFGL+++S G P+
Sbjct: 826 EIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPL 885
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+ K +S I GR+I +RD YRFH F G+CSC DYW
Sbjct: 886 RIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 216/432 (50%), Gaps = 16/432 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ + I A +FD + + D +S+N++I+A G E +L F MR
Sbjct: 199 NSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAK 258
Query: 129 TDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
TD T+S L + S+ NL + LH + + G + V NSLL+ YS+ G ++A+ V
Sbjct: 259 TDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFV 318
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F++M E +D +SWNSM+ ++ + AL+L EM+ + + T + L+A +LE
Sbjct: 319 FHKMRE-RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLET 377
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L HA +I G H N IG+ L+ +Y K G M +V + +P D V WN +I
Sbjct: 378 LK---IVHAFVILLGLHHNLIIGNALVTMYGKF-GSMAAAQRVCKIMPDRDEVTWNALIG 433
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP----SLGKQIHALTIKI 362
G++ +E + A+ F L G + + V ++SA LSP G IHA +
Sbjct: 434 GHADNKE-PNAAIEAFNLLREEGVPVNYITIVNLLSAF--LSPDDLLDHGMPIHAHIVVA 490
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
V ++L+ MY++CG+L + +FD + N+ + N++++ A +G G EAL+L
Sbjct: 491 GFELETF-VQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKL 549
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
M I +F + + + EGQ+ S++ GFE + +D+ G
Sbjct: 550 IIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIK-HGFESNDYVLNATMDMYG 608
Query: 483 RAGKLTDAERLI 494
+ G++ D R++
Sbjct: 609 KCGEIDDVFRIL 620
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 207/428 (48%), Gaps = 12/428 (2%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y++ I A+ +FD++P+ + S+N L+S + G + A+ F M E +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 135 SGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+ L+TA + C+ + Q+H I CG V SLL Y G++ E VF E+
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
E + VSW S++V Y + E + +++ + + + +A+++ + L D + G
Sbjct: 122 E-PNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q +IKSG + + LI ++ C + + VF+++ + D + WN++I+ S
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDS-IEEASCVFDDMKERDTISWNSIITA-SVH 238
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRIS 370
+ +++L F ++ D + ++ C S + G+ +H + +K + SN +
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESN-VC 297
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N+L++MYS+ G EDA +F +M E + +S NSM+A + +G AL L ML+T
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+TF + LSAC + E K + G + ++ + G+ G + A
Sbjct: 358 KATNYVTFTTALSACYNL----ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAA 413
Query: 491 ERLIEAMP 498
+R+ + MP
Sbjct: 414 QRVCKIMP 421
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MYSK G++E A+ +FD+MPE N S N++++G+ + G +A++ F MLE + P++
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S+++AC +G + EG G + + ++ G G + + + +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMV---- 116
Query: 498 PFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
F ++E N V + L YA +G +EV ++ R +R GV
Sbjct: 117 --------------FKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGV 156
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ LH+L +K+ + Y+ N + +Y KCG + Q + + S+N+L++A
Sbjct: 578 LDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISA 637
Query: 75 YARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
AR AR+ F ++ +PD V++ +L+SA + G + L+ F M K
Sbjct: 638 LARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTK----- 692
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
G+ T + +C+I L R G L EA+ +M
Sbjct: 693 ----FGVPTGIEHCVCIIDLL-----------------------GRAGKLTEAENFINKM 725
Query: 191 GEIKDEVSWNSMVVAYGQH 209
++ W S++ A H
Sbjct: 726 PVPPTDLVWRSLLAACKIH 744
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/661 (35%), Positives = 356/661 (53%), Gaps = 47/661 (7%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+ A FNQ +V + ++ Y R R+ A LFD++P D+VS+N++IS +C
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
GD +A+ LF +M E+ + ++G + + Q L A+ N S
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGK-----VDQAERLFYQMPVKDTAAWN-S 164
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ Y + G +D+A ++F +M K+ +SW +M+ Q+ EAL LF+ M+ +
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPG-KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKS 223
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCM 287
++TA + G+Q H +IK GF ++ + LI YA C GD R
Sbjct: 224 TSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR--- 280
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
KVF+E + +W ++SGYS +++ D AL F + R P+ +F +++CS L
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHED-ALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
GK++H + +K+ + ++ V N+LV MYS GN+ DA +F ++ + + VS NS+
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAF-VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSI 398
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G AQHG G A +F M+ N P ITF +LSAC+H G + +G+K F M
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN 458
Query: 467 -FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KA 508
+ + +HY+CM+D+LGR GKL +AE LIE M P + KA
Sbjct: 459 HIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKA 518
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A L+ ++ YV+L+NIYA++G+W V+ +R M+ G+ KKPG SW+ ++ + H
Sbjct: 519 AAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHE 578
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F + G P I+ LE + K+K+ GY PD KE+ L +HSE+LA+A
Sbjct: 579 FFS--GDQPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIA 636
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL++T G + VMKNLR+C DCH IK IS + GREI +RD RFH FK+G CSCGDY
Sbjct: 637 FGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDY 696
Query: 677 W 677
W
Sbjct: 697 W 697
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L +C L GK +H + +K + A++ N +++YS G ++ A F +
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S+N ++ A+ R A +F Q+ +PD +++ L+SA + CG E
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 117 SLF 119
LF
Sbjct: 448 KLF 450
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/700 (35%), Positives = 373/700 (53%), Gaps = 55/700 (7%)
Query: 29 LVPFSAYLSNHFILLYSKC---GCLSAAH----HAFNQTQHANVFSFNVLLAAYARQLRI 81
L A S ++ L +C G L AA H A++F L+ AY R
Sbjct: 70 LTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAA 129
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA- 140
AR+LFD +P+ ++V++ L++ Y L +F +M E +TL + A
Sbjct: 130 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 189
Query: 141 -SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+S ++ L KQ+H AI G + S+ NSL + Y++ G LD A R F+ + E K+ ++W
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVITW 248
Query: 200 NSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+M+ A + E +E + LF +M+ + + +TL S+++ + DL G Q A
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD-- 316
K G N + + + LY + G+ + M++FE++ ++ WN MISGY+Q + +
Sbjct: 309 KIGCETNLPVKNSTMYLYLR-KGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367
Query: 317 --------QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN 367
QAL F+ L R PD +F ++S CS + + G+QIHA TIK S+
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ VN+ALV MY+KCG ++DA + F MP V+ SMI+GY+QHG EA++LFE M
Sbjct: 428 -VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P ITFVS+LSAC++ G V E + YF MMK + EP +HY CMID+ R G++
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546
Query: 488 TDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIY 530
DA I+ F P +A AA+ L+L+P Y++L N+Y
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 606
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
++ +W++VA +R+LM+ V SWI +K +++ F A D +HP E++ LE +
Sbjct: 607 ISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL 666
Query: 591 RKMKQAGYVP----------DKEK----RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
K K GY P D EK L HHSE+LAVA GLL T G + V KN+ +
Sbjct: 667 EKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITM 726
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
C DCH++IK S + REI VRD+ R H FKDGRCSCGD+
Sbjct: 727 CRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 222/479 (46%), Gaps = 53/479 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C+ D+ GK +H +K + N LY+K G L +A AF +
Sbjct: 181 TLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR- 239
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-TESALSLF 119
IP+ +++++ T+ISA A+ + E +SLF
Sbjct: 240 ------------------------------IPEKNVITWTTMISACAEDEECVELGMSLF 269
Query: 120 KDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
DM + FTL+ +++ + +L L KQ+ + G + V NS + Y R
Sbjct: 270 IDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRK 329
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-----------HREGLEALQLFQEMVSLQ 226
G DEA R+F +M E ++WN+M+ Y Q G +AL +F+++
Sbjct: 330 GETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSV 388
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ D++T +SIL+ +++ L G Q HA IKSGF + + S L+++Y KC G ++D
Sbjct: 389 MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC-GCIQDA 447
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
K F E+P V W +MISGYSQ + +A+ F+++ G P++ +FV ++SACS
Sbjct: 448 NKAFLEMPTRTFVTWTSMISGYSQHGQ-PQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLN 404
+ + +K E + + ++ M+ + G +EDA R E N +
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWS 566
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMMK 462
S++AG HG A + +LE + P I T++ +L+ T + + + +MK
Sbjct: 567 SLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILLLNMYISTERWQDVARVRKLMK 623
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/653 (35%), Positives = 368/653 (56%), Gaps = 37/653 (5%)
Query: 58 NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
NQ N+ N L+ YA+ +I AR LFD + + ++VS+ L++ Y G L
Sbjct: 55 NQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLR 114
Query: 118 LFKDMREKRF-DTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCY 174
LFK M + + + + +I++ S++ +++ Q H A+ G + V N+L+ Y
Sbjct: 115 LFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMY 174
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
SR + A V+YE+ + D S+N ++ ++ EAL++ MV + D T
Sbjct: 175 SRRSDVKGAMSVWYEVPGL-DVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTY 233
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ + L+DL GLQ H + ++G +S + S +ID+Y KC G++ + KVF +
Sbjct: 234 VTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKC-GNILNARKVFNRLQ 292
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
++V W +++ YSQ + ++AL F ++ G P++ +F ++++C+ +S GK
Sbjct: 293 TKNVVSWTAILAAYSQNGCF-EEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+H IK + I V NAL+ MYSK G++E A ++F M ++++ ++MI G + H
Sbjct: 352 LLHT-RIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHH 410
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EAL +F+ ML P +TFV VLSACAH G V EG Y + + G EP EH
Sbjct: 411 GLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEH 470
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLE 516
Y+C++ LL +AG+L +AE +++ P +A K A LQ++
Sbjct: 471 YTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMD 530
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + Y++L+N+YA + +W+ V IR+LMR+R V+K+PG SWIE++ +HVFV+E +H
Sbjct: 531 PGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTH 590
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P +I+ ++E+ ++ GYVPD K + + +HSEKLA+A+GL+ T
Sbjct: 591 PESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPS 650
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI V+KNLR+C DCH+A+K IS + R I VRD RFHCF DG CSC DYW
Sbjct: 651 GAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 197/428 (46%), Gaps = 41/428 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++ +C +V G H LK+ + F Y+ N I +YS+ + A + +
Sbjct: 132 FATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVP 191
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN-TLISAYADCGDTESALSLFK 120
+VFS+N+++ + A ++ D++ +V N T ++A+ C S K
Sbjct: 192 GLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC-------SHLK 244
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
D+R L Q+HC G ++ + V+++++ Y + G +
Sbjct: 245 DLR-----------------------LGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNI 281
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A++VF + + K+ VSW +++ AY Q+ EAL F EM L + YT A +L +
Sbjct: 282 LNARKVFNRL-QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L G H + KSGF + +G+ LI++Y+K SG + KVF E+ D +
Sbjct: 341 CAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSK-SGSIEAAHKVFLEMICRDSIT 399
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTI 360
W+ MI G S +AL F+++ P +FV V+SAC++L S+ + + L
Sbjct: 400 WSAMICGLSH-HGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLG-SVQEGFYYLNQ 457
Query: 361 KIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG---YAQHG 414
++ V + +V + K G L++A P + + V+ ++++ + +G
Sbjct: 458 LMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYG 517
Query: 415 IGMEALRL 422
+G + L
Sbjct: 518 LGKKVAEL 525
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 37/318 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ C +DL G +H + + +++S+ I +Y KCG + A FN+
Sbjct: 232 TYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL 291
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q NV S+ +LAAY++ G E AL+ F
Sbjct: 292 QTKNVVSWTAILAAYSQN-------------------------------GCFEEALNFFP 320
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + +T + L+ A + L K LH GF+ + V N+L+ YS++G
Sbjct: 321 EMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSG 380
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A +VF EM +D ++W++M+ H G EAL +FQEM++ + T +L
Sbjct: 381 SIEAAHKVFLEM-ICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVL 439
Query: 239 TAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A L + G + L+K +G + ++ L K +G + + + P +
Sbjct: 440 SACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK-AGRLDEAENFMKSTPVKW 498
Query: 297 DLVLWNTMISGYSQKEEY 314
D+V W T++S + Y
Sbjct: 499 DVVAWRTLLSACHVHQNY 516
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 335/568 (58%), Gaps = 35/568 (6%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A S NL +++H F A ++NSL+ Y + + +A+ VF +M KD VSW
Sbjct: 62 AQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRR-KDMVSW 120
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
S++ Y Q+ +EA+ L M+ + + +T AS+L A + D G Q HA +K
Sbjct: 121 TSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVK 180
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
G+H++ ++GS L+D+YA+C G M VF+++ + V WN +ISG+++K + + AL
Sbjct: 181 CGWHEDVYVGSALLDMYARC-GKMDMATAVFDKLDSKNGVSWNALISGFARKGD-GESAL 238
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ R G+ ++ V S+ + L GK +HA IK + V N L+ M
Sbjct: 239 MTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAF-VGNTLLDM 297
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+K G++ DAR++FDR+ + V+ NSM+ +AQ+G+G EA+ FE M ++ + ITF
Sbjct: 298 YAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITF 357
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +L+AC+H G V EG++YF MMK+ + EPE +HY ++ LLGRAG L A I MP
Sbjct: 358 LCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMP 416
Query: 499 FNP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + AA+H +L+P ++ P V+L NIYA++G+W+ A
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAAR 476
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
+R +M+ GV+K+P SW+E++ +H+FVA D +HP +EI+ E+S+K+++ GYVPD
Sbjct: 477 VRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPD 536
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
KE L +HSEKLA+AF L+ G I +MKN+RICGDCH+A K+IS
Sbjct: 537 MDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISK 596
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ GREI VRDT RFH F G CSCGDYW
Sbjct: 597 VFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 223/470 (47%), Gaps = 48/470 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+R + C ++L + +HA + A+L N I +Y KC
Sbjct: 53 VYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRS----------- 101
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR +FDQ+ + D+VS+ +LI+ YA A+ L
Sbjct: 102 --------------------VLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLP 141
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + RF +GFT + L+ A+ + +Q+H LA+ CG+ V ++LL Y+R G
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCG 201
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A VF ++ + K+ VSWN+++ + + +G AL F EM+ +T +S+
Sbjct: 202 KMDMATAVFDKL-DSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVF 260
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ L L G HAH+IKS + +G+ L+D+YAK SG M D KVF+ + DL
Sbjct: 261 SSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAK-SGSMIDARKVFDRVDNKDL 319
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V WN+M++ ++Q +A+ F+++ + G + + +F+C+++ACS+ GK+
Sbjct: 320 VTWNSMLTAFAQY-GLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE 378
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQH--- 413
+ + ++ I +VA+ + G L A +MP T ++ +++A H
Sbjct: 379 MMKEYDLEPE-IDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNA 437
Query: 414 GIG-MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
+G A +FE + + PP V + + A TG+ + MMK
Sbjct: 438 KVGQFAADHVFELDPDDSGPP-----VLLYNIYASTGQWDAAARVRMMMK 482
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/627 (35%), Positives = 352/627 (56%), Gaps = 55/627 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++C G G LHA LK + + + +Y+KC
Sbjct: 273 TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCD------------ 320
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ AR++F+ P P S+N LI YA AL +F+
Sbjct: 321 -------------------RMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFR 361
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+++ D D +LSG +TA S ++ QLH LA+ CG D V N++L Y++ G
Sbjct: 362 SLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCG 421
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L EA +F +M EIKD VSWN+++ A+ Q+ E L LF M+ + D YT S++
Sbjct: 422 ALMEACLIFDDM-EIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVV 480
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G++ H +IKSG + +GS +ID+Y KC G + + K+ E + +
Sbjct: 481 KACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKC-GMLVEAEKIHERLEERTT 539
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN++ISG+S E+ + AL F ++ +VG PD+ ++ V+ C+NL+ LGKQIH
Sbjct: 540 VSWNSIISGFS-SEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHG 598
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K+++ S+ + + + +V MYSKCGN++D+R +F++ P+ + V+ ++MI YA HG+G
Sbjct: 599 QILKLQLHSD-VYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGE 657
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A++LFE M N+ P + F+SVL ACAH G V +G YF M+ +G +P+ EHYSCM
Sbjct: 658 DAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLLGR+G++ +A LIE+MPF +A KAAN LQL+P ++
Sbjct: 718 VDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDS 777
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YA +G W EVA IR M++ ++K+PG SWI+V+ ++H F+ D +HP +
Sbjct: 778 SAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSE 837
Query: 581 EIHNYLEEMSRKMKQAGYVPDKEKRLV 607
EI+ + +MK GYVP+ + L+
Sbjct: 838 EIYQQTHLLVDEMKWDGYVPEIDGFLL 864
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 261/502 (51%), Gaps = 12/502 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF + + C + + GK HA + + VP + ++SN + Y KC L+ A + F++
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVP-TVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+N ++ YA + A+ LFD +P+ D+VS+N+++S Y G ++ +F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR D T + ++ A + + L Q+HCLAI GFD +L+ YS
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
LD A +F EM E ++ V W++++ Y ++ E L+L++ M+ +G+ T AS
Sbjct: 219 KKLDHAFNIFCEMPE-RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ L G Q HA+ +K+ F ++ +G+ +D+YAKC M D KVF P P
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCD-RMVDARKVFNTFPNPT 336
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIH 356
N +I GY+++++ +AL F+ L + D+ S ++ACS + L G Q+H
Sbjct: 337 RQSHNALIVGYARQDQVL-EALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
L +K + N I V N ++ MY+KCG L +A +FD M + VS N++IA + Q+
Sbjct: 396 GLAVKCGLDFN-ICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHV 454
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYS 475
E L LF ML + + P + TF SV+ ACA + G + + ++K G + S
Sbjct: 455 EETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG--S 512
Query: 476 CMIDLLGRAGKLTDAERLIEAM 497
+ID+ + G L +AE++ E +
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERL 534
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 250/700 (35%), Positives = 373/700 (53%), Gaps = 55/700 (7%)
Query: 29 LVPFSAYLSNHFILLYSKC---GCLSAAH----HAFNQTQHANVFSFNVLLAAYARQLRI 81
L A S ++ L +C G L AA H A++F L+ AY R
Sbjct: 70 LTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAA 129
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA- 140
AR+LFD +P+ ++V++ L++ Y L +F +M E +TL + A
Sbjct: 130 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 189
Query: 141 -SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+S ++ L KQ+H AI G + S+ NSL + Y++ G LD A R F+ + E K+ ++W
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVITW 248
Query: 200 NSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+M+ A + E +E L LF +M+ + + +TL S+++ + DL G Q A
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD-- 316
K G N + + + LY + G+ + M++FE++ ++ WN MISGY+Q + +
Sbjct: 309 KIGCETNLPVKNSTMYLYLR-KGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367
Query: 317 --------QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN 367
QAL F+ L R PD +F ++S CS + + G+QIHA TIK S+
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ VN+ALV MY+KCG ++DA + F MP V+ SMI+GY+QHG EA++LFE M
Sbjct: 428 -VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P ITFVS+LSAC++ G V E + YF MMK + EP +HY CMID+ R G++
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546
Query: 488 TDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIY 530
DA I+ F P +A AA+ L+L+P Y++L N+Y
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 606
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
++ +W++VA +R+LM+ V SWI +K +++ F A D +HP E++ LE +
Sbjct: 607 ISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL 666
Query: 591 RKMKQAGYVP----------DKEK----RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
K K GY P D EK L HHSE+LAVA GLL T G + V KN+ +
Sbjct: 667 EKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITM 726
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
C DCH++IK S + REI VRD+ R H FKDGRCSCGD+
Sbjct: 727 CRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 30/313 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C R DL GK + A K + + N + LY + G A F Q
Sbjct: 283 TLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQM 342
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A++ ++N +++ YA Q+ D + DL + + AL++F+
Sbjct: 343 EDASIITWNAMISGYA---------QIMDS-AKDDLQARSRGF----------QALTIFR 382
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
D++ D FT S +++ S + L + Q+H I GF VN++L+ Y++ G
Sbjct: 383 DLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A + F EM + V+W SM+ Y QH + EA+QLF+EM + + T S+L
Sbjct: 443 CIQDANKAFLEM-PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLL 501
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQN---SHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+A S LV + + ++K + H G +ID++ + G + D +
Sbjct: 502 SA-CSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGC-MIDMFVRL-GRVEDAFSFIKRTGF 558
Query: 295 QPDLVLWNTMISG 307
+P+ +W+++++G
Sbjct: 559 EPNEAIWSSLVAG 571
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 49/255 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G+ +HA +K+ +++ + +Y+KCGC+ A+ AF
Sbjct: 395 TFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFL-- 452
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++P V++ ++IS Y+ G + A+ LF+
Sbjct: 453 -----------------------------EMPTRTFVTWTSMISGYSQHGQPQEAIQLFE 483
Query: 121 DMREKRFDTDGFTL---------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
+MR + T +GL+ + + ++K+ +C+ DHY ++
Sbjct: 484 EMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPV--VDHYG----CMI 537
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLD 230
+ R G +++A G +E W+S+V H A +++ L+ G++
Sbjct: 538 DMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE 597
Query: 231 MYTLASILTAFTSLE 245
Y L +L + S E
Sbjct: 598 TYIL--LLNMYISTE 610
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/678 (34%), Positives = 374/678 (55%), Gaps = 42/678 (6%)
Query: 38 NHFILLYSKCGCLSAAH------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQI 91
++F ++ C + H H+ +NVF + L+ Y + R+ AR++FD +
Sbjct: 110 DNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGM 169
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIK 149
P+ D V +NT+I+ + ++ LF++M D T++ ++ A++ L +
Sbjct: 170 PERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGM 229
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+ CLA+ GF V L++ YS+ G ++ A+ +F + D +++N+M+ + +
Sbjct: 230 GIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINR-PDLIAYNAMISGFTAN 288
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+++LF+E++ + T+ ++ + L H +KSG N +
Sbjct: 289 GGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVS 348
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ +Y K + ++ +F+E P+ +V WN MISGY+Q ++ A+ FK++ +
Sbjct: 349 TAFTAIYNKLN-EIDLARHLFDESPEKTVVAWNAMISGYTQNGS-TETAISLFKEMMKTE 406
Query: 330 YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
+ P+ + ++SAC+ L S S GK +H L IK E I V+ ALV MY+KCGN+ +A
Sbjct: 407 FTPNAVTITTILSACAQLGSLSFGKWVHHL-IKSENLEPNIYVSTALVDMYAKCGNISEA 465
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+LFD M E NTV+ N+MI GY HG G EAL+L+ ML P+ +TF+SVL AC+H
Sbjct: 466 WQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHA 525
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG------ 502
G V EG++ F M + + EP EHY+CM+D+LGR+G+L A I+ MP PG
Sbjct: 526 GLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGT 585
Query: 503 -----------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
IA A+ +L+P + YV+L+NIY+ + + A+IR++++ R +
Sbjct: 586 LLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKL 645
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY----------VPD 601
K PG + IEV HVFV+ D SH +I+ LE+++ KM++ GY V +
Sbjct: 646 AKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEE 705
Query: 602 KEKRLV--HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
+EK L HSEKLA+AFGL++T G I ++KNLR+C DCH A KFIS I R I VRD
Sbjct: 706 EEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRD 765
Query: 660 TYRFHCFKDGRCSCGDYW 677
RFH FKDG CSCGDYW
Sbjct: 766 ANRFHHFKDGICSCGDYW 783
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 222/416 (53%), Gaps = 8/416 (1%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFDTDGFTLSGLITASS 142
AR LF +P+PD+ +N L+ ++ S++SL+ +R D FT + + A S
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N+ L+ LH +I G+ V ++L+ Y + + A++VF M E +D V WN+M
Sbjct: 123 NDKHLM-LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPE-RDTVLWNTM 180
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ ++ +++QLF+EMV+ + +D T+ ++L A L++L G+ +K GF
Sbjct: 181 INGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGF 240
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
++ +GLI LY+KC GD+ +F I +PDL+ +N MISG++ ++ ++ F
Sbjct: 241 GFCDYVLTGLISLYSKC-GDVNTARLLFRRINRPDLIAYNAMISGFTANGG-TECSVKLF 298
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
++L G + V +I S L IH +K I N +V+ A A+Y+K
Sbjct: 299 RELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNP-TVSTAFTAIYNK 357
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
++ AR LFD PE V+ N+MI+GY Q+G A+ LF+ M++T P +T ++
Sbjct: 358 LNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTI 417
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
LSACA G ++ G+ ++K EP + ++D+ + G +++A +L ++M
Sbjct: 418 LSACAQLGSLSFGKWVHHLIKSE-NLEPNIYVSTALVDMYAKCGNISEAWQLFDSM 472
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 188/401 (46%), Gaps = 41/401 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL ++L G + L LK F Y+ I LYSKCG ++ A
Sbjct: 211 TVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTA------- 263
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R LF +I +PDL++YN +IS + G TE ++ LF+
Sbjct: 264 ------------------------RLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ T+ GLI S +L L +H + G +V+ + Y++
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+ +F E E K V+WN+M+ Y Q+ A+ LF+EM+ + + T+ +IL
Sbjct: 360 EIDLARHLFDESPE-KTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTIL 418
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+A L L G H HLIKS N ++ + L+D+YAKC G++ + ++F+ + + +
Sbjct: 419 SACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKC-GNISEAWQLFDSMSEKN 476
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQI- 355
V WNTMI GY Y +AL + ++ +GY+P +F+ V+ ACS+ G++I
Sbjct: 477 TVTWNTMIFGYGL-HGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
H + K I I +V + + G LE A +MP
Sbjct: 536 HNMVNKYRIEP-LIEHYACMVDILGRSGQLEKALEFIKKMP 575
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN----SHIGSGLIDLYAKCSGDMR 284
L TL S++ ++ L Q HA I +G+ + + + L D A R
Sbjct: 10 LSRNTLFSLINKASTFPHLA---QTHAQFILNGYRFDLATLTKLTQKLFDFSAT-----R 61
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISA 343
+F +P+PD+ L+N ++ G+S + S ++ + L R PD+ ++ ++A
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPS-SSISLYTHLRRNTNLSPDNFTYAFAVAA 120
Query: 344 CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
CSN + H++ I+ + + V +ALV +Y K + AR++FD MPE +TV
Sbjct: 121 CSNDKHLMLLHAHSI---IDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW 177
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM-MK 462
N+MI G ++ ++++LF M+ + + T +VL A A ++ G + +K
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK 237
Query: 463 DMFGF 467
FGF
Sbjct: 238 IGFGF 242
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/615 (36%), Positives = 348/615 (56%), Gaps = 72/615 (11%)
Query: 94 PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHC 153
P +V +N ++ YA CG A +F +M E+
Sbjct: 120 PGIVIWNRILGMYAKCGSLVDARKVFDEMPERDV-------------------------- 153
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
C + N ++ Y+ G L+EA+ +F EM E +D SW +MV Y + +
Sbjct: 154 ----CSW-------NVMVNGYAEVGLLEEARNLFDEMPE-RDSYSWTAMVTGYVKKDQPE 201
Query: 214 EALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L+ M + +++T++S + A +++ + G + H H++++G + + S L
Sbjct: 202 EALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSL 261
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+D+Y KC G + + +F++I D+V W +MI Y + + + F +L P
Sbjct: 262 MDMYGKC-GCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWR-EGFSLFSELIGSCERP 319
Query: 333 DDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
++ +F V++AC++L+ LG+Q+H ++ + +++L+ MY+KCGN+E AR +
Sbjct: 320 NEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFA-SSSLIDMYTKCGNIESARHV 378
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
D P+ + VSL S+I GYAQ+G EAL+ F+ +L++ P ++TFV+VLSAC H G V
Sbjct: 379 VDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 438
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------- 501
+G ++F + + +HY+C++DLL R+G+ + ++ MP P
Sbjct: 439 EKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLG 498
Query: 502 -----GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
G+I L +AA ++EP N V YV +ANIYAA+GKWEE +R+ M++ G+ KK
Sbjct: 499 GCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKK 558
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DK 602
PG SW E+K++ HVF+A D SHPM +I +L E+ +KMK+ GYVP K
Sbjct: 559 PGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQK 618
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
E+ LV+HSEKLAVAF +LST G I V KNLR C DCH+AIKFIS I R+IT+RD+ R
Sbjct: 619 EENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTR 678
Query: 663 FHCFKDGRCSCGDYW 677
FHCF++G+CSC DYW
Sbjct: 679 FHCFENGQCSCRDYW 693
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
P ++ +I CS GK++H I+ I + N ++ MY+KCG+L DAR+
Sbjct: 85 PPASTYCNLIQVCSQTRALEEGKKVHE-HIRTSGFVPGIVIWNRILGMYAKCGSLVDARK 143
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FD MPE + S N M+ GYA+ G+ EA LF+ M E + + ++ ++++ +
Sbjct: 144 VFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERD----SYSWTAMVTGYVKKDQ 199
Query: 451 VAEGQKYFSMMKDMFGFEP 469
E +S+M+ + +P
Sbjct: 200 PEEALVLYSLMQRVPNSKP 218
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 251/634 (39%), Positives = 364/634 (57%), Gaps = 42/634 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ IA AR++F + + D VS+N++I+ G A+ ++ MR
Sbjct: 73 NGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEIL 132
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FTL ++ AS L +Q+H ++ G D SV+N+L+T Y+ G+L+E +++
Sbjct: 133 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 192
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M E D+VSWNS++ A L EA+ F + L+ T +S+L+A +SL
Sbjct: 193 FSSMPE-HDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLS 251
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
G Q H +K + + LI Y KC G+M C K+F + + D V WN+M
Sbjct: 252 FGELGKQIHGLALKYNIADEATTENALIACYGKC-GEMDGCEKIFSRMSERRDDVTWNSM 310
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY E + +AL + + G D + V+SA ++++ G ++HA +++
Sbjct: 311 ISGYIHNELLA-KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 369
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG L+ A R F+ MP N+ S NSMI+GYA+HG G EAL+LF
Sbjct: 370 LESD-VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 428
Query: 424 EWM-LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
M L+ PP ++TFV VLSAC+H G + EG K+F M D +G P EH+SCM DLLG
Sbjct: 429 ANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLG 488
Query: 483 RAGKLTDAERLIEAMPFNP-------------------GSIALKAANHFLQLEPSNAVPY 523
RAG+L E I+ MP P + KAA QLEP NAV Y
Sbjct: 489 RAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 548
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L N+YAA G+WE++ R+ M+D V+K+ G+SW+ +K +H+FVA D SHP I+
Sbjct: 549 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIY 608
Query: 584 NYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLST-SYGEPILV 630
L+E++RKM+ AGYVP +KE+ L +HSEKLAVAF L + S PI +
Sbjct: 609 KKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRI 668
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
MKNLR+CGDCH+A K+IS I GR+I +RD+ R+
Sbjct: 669 MKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 158/303 (52%), Gaps = 13/303 (4%)
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT--SLEDLVG---GLQFHAHL 257
+V + + G EA +LF +M S+ + + + +L++F SL + VG G + H H+
Sbjct: 1 MVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHV 59
Query: 258 IKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
I +G IG+GL+++YAKC G + D +VF + + D V WN+MI+G Q +
Sbjct: 60 ITTGLVDFMVGIGNGLVNMYAKC-GSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFI- 117
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNAL 375
+A+ ++ + R P + + +S+C++L LG+QIH ++K+ I N +SV+NAL
Sbjct: 118 EAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN-VSVSNAL 176
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM-EALRLFEWMLETNIPPT 434
+ +Y++ G L + R++F MPEH+ VS NS+I A + EA+ F L
Sbjct: 177 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLN 236
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITF SVLSA + E K + + E + +I G+ G++ E++
Sbjct: 237 RITFSSVLSA-VSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIF 295
Query: 495 EAM 497
M
Sbjct: 296 SRM 298
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 311 KEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS------LGKQIHALTIKIE 363
++++ ++A F +N + P+ S+V ++S+ S + G+++H I
Sbjct: 6 RQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEQVGLKKGREVHGHVITTG 63
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + + N LV MY+KCG++ DARR+F M E ++VS NSMI G Q+G +EA+ +
Sbjct: 64 LVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERY 123
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ M I P + T +S LS+CA GQ+ + G + + ++ L
Sbjct: 124 QSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAE 182
Query: 484 AGKLTDAERLIEAMP 498
G L + ++ +MP
Sbjct: 183 TGYLNECRKIFSSMP 197
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ VL L G +HA ++ + + + + +YSKCG L A FN
Sbjct: 342 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 401
Query: 62 HANVFSFNVLLAAYARQLRIASARQLF-----DQIPQPDLVSYNTLISAYADCGDTESAL 116
N +S+N +++ YAR + A +LF D PD V++ ++SA + G E
Sbjct: 402 VRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 461
Query: 117 SLFKDMRE 124
F+ M +
Sbjct: 462 KHFESMSD 469
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 364/659 (55%), Gaps = 50/659 (7%)
Query: 58 NQTQHANVFSFNVLL--AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
N H + F N+LL + RQ + + LF P++ YN+LI+ + +
Sbjct: 38 NHHLHHDTFLVNLLLKRTLFFRQTKYSYL--LFSHTQFPNIFLYNSLINGFVNNHLFHET 95
Query: 116 LSLFKDMREKRFDTDGFT----LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
L LF +R+ GFT L ASS L + LH L + CGF+H + SLL
Sbjct: 96 LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI--DLHSLVVKCGFNHDVAAMTSLL 153
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLG 228
+ YS +G L++A ++F E+ + + V+W ++ Y G+HRE A+ LF++MV + +
Sbjct: 154 SIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHRE---AIDLFKKMVEMGVK 209
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
D Y + +L+A + DL G ++ + +NS + + L++LYAKC G M
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC-GKMEKARS 268
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
VF+ + + D+V W+TMI GY+ + + + F ++ + PD S V +S+C++L
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNS-FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG+ +L + E +N + + NAL+ MY+KCG + +F M E + V +N+ I
Sbjct: 328 ALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+G A++G + +F + I P TF+ +L C H G + +G ++F+ + ++
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAA-----------------N 510
+ EHY CM+DL GRAG L DA RLI MP P +I A
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ LEP NA YV L+NIY+ G+W+E A +R +M +G++K PG+SWIE++ ++H F+
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFG 618
A+D SHP+ +I+ LE++ +M+ G+VP +KE+ L +HSEKLAVA G
Sbjct: 567 ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALG 626
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ST +G+ I V+KNLR+CGDCH +K IS I REI VRD RFHCF +G CSC DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/665 (35%), Positives = 361/665 (54%), Gaps = 79/665 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK--RFDTDGFTLSGLITAS 141
ARQLFD IPQPD + +TLISA G + A+ ++ ++E+ + D F + A
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
S + +K++H A CG V N+L+ Y + ++ A+RVF ++ ++D VSW S
Sbjct: 91 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL-VVRDVVSWTS 149
Query: 202 MVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+ Y G R+G++ +F+EM + + T++SIL A L+DL G + H +
Sbjct: 150 LSSCYVKCGFPRKGMD---VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 206
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY---- 314
+ G N + S L+ LYAKC +R+ VF+ +P D+V WN +++ Y + +EY
Sbjct: 207 RHGMVVNLFVCSALVSLYAKCLS-VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 265
Query: 315 ------------------------------SDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
S++A+ F+K+ ++G+ P++ + ++ AC
Sbjct: 266 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPAC 325
Query: 345 S---NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
S NL +GK+IH + + ++ AL+ MY+KCG+L +R +FD M + V
Sbjct: 326 SFSENLR--MGKEIHCYVFR-HWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVV 382
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ N+MI A HG G EAL LF+ ML + + P ++TF VLS C+H+ V EG + F+ M
Sbjct: 383 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 442
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA------------- 508
EP+ HYSC++D+ RAG+L +A + I+ MP P + A A
Sbjct: 443 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 502
Query: 509 ----ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A ++EP+N YV L NI + W E + +R LM++RG+ K PG SW++V
Sbjct: 503 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGN 562
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
++H FV D S+ +I+N+L+E+ KMK AGY PD K + L +HSEK
Sbjct: 563 KVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEK 622
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LAVAFG+L+ + I V KNLRICGDCHNAIK++S + G I VRD+ RFH FK+G CS
Sbjct: 623 LAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCS 682
Query: 673 CGDYW 677
C D W
Sbjct: 683 CKDLW 687
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 160/323 (49%), Gaps = 26/323 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C +DL +GK +H +++ + + ++ + + LY+KC + A F+
Sbjct: 181 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 240
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
H +V S+N +L AY + LF ++ + D ++N +I + G +E A+
Sbjct: 241 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 300
Query: 117 SLFKDMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYA----SVNNSL 170
+F+ M++ F + T+S ++ A S NL + K++HC F H+ + +L
Sbjct: 301 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYV----FRHWKVGDLTSTTAL 356
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y++ G L+ ++ VF +M KD V+WN+M++A H G EAL LF +M+ ++ +
Sbjct: 357 LYMYAKCGDLNLSRNVF-DMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 415
Query: 231 MYTLASILTAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
T +L+ + + G+Q HL++ + S + +D+Y++ +G + +
Sbjct: 416 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV----VDIYSR-AGRLNE 470
Query: 286 CMKVFEEIP-QPDLVLWNTMISG 307
K + +P +P W +++
Sbjct: 471 AYKFIQGMPMEPTASAWGALLAA 493
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 203/485 (41%), Gaps = 79/485 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F K C D + K +H + V ++ N I Y KC C+ A
Sbjct: 80 VFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA------- 132
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R++FD + D+VS+ +L S Y CG + +F+
Sbjct: 133 ------------------------RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFR 168
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + T+S ++ A + +L K++H A+ G V ++L++ Y++
Sbjct: 169 EMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCL 228
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE--------------------------- 211
+ EA+ VF M +D VSWN ++ AY +++E
Sbjct: 229 SVREARMVFDLMPH-RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVI 287
Query: 212 --------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
EA+++F++M + + T++SIL A + E+L G + H ++ +
Sbjct: 288 GGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKV 347
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+ + L+ +YAKC GD+ VF+ + + D+V WNTMI + +AL F
Sbjct: 348 GDLTSTTALLYMYAKC-GDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN-GKEALFLFD 405
Query: 324 KLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
K+ P+ +F V+S CS+ G QI + + + + +V +YS+
Sbjct: 406 KMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRA 465
Query: 383 GNLEDARRLFDRMPEHNTVS-LNSMIAG---YAQHGIG-MEALRLFEWMLETNIPPTNIT 437
G L +A + MP T S +++A Y + + A +LFE +E N P ++
Sbjct: 466 GRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE--IEPNNPGNYVS 523
Query: 438 FVSVL 442
++L
Sbjct: 524 LFNIL 528
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
SH+G LI + A GD ++F+ IPQPD +T+IS + S++A+ + L
Sbjct: 12 SHLGLRLIRV-ALNVGDFNRARQLFDNIPQPDPTTCSTLISALTT-HGLSNEAIKIYSSL 69
Query: 326 NRVGYHPDDCSFVCVISACSNLSPSLG-KQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G PD F+ AC+ +L K++H + + S+ + V NAL+ Y KC
Sbjct: 70 QERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSD-VFVGNALIHAYGKCKC 128
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E ARR+FD + + VS S+ + Y + G + + +F M + + P +T S+L A
Sbjct: 129 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 188
Query: 445 CAHTGKVAEGQK 456
CA + G++
Sbjct: 189 CAELKDLKSGKE 200
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/633 (36%), Positives = 358/633 (56%), Gaps = 38/633 (6%)
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFDTDGFTLSGL 137
L + A +F + D++++N+++ A+ + AL + +M E+ R D FT L
Sbjct: 26 LGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSL 85
Query: 138 ITASSNNL--CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ + L + K LH + + +LL Y+ G L A+ +F MG ++
Sbjct: 86 LKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGH-RN 144
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+V W SM+ Y ++ EAL L+++M D T+A++++A L+DL G++ H+
Sbjct: 145 KVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS 204
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
H+ + + +GS L+++YAKC GD++ +VF+++ D+ W+ +I GY K S
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKC-GDLKTARQVFDKLSDKDVYAWSALIFGYV-KNNRS 262
Query: 316 DQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+AL F+++ P++ + + VISAC+ L G+ +H + + + + +S+NN
Sbjct: 263 TEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ-KGHSVSLNN 321
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+L+ M+SKCG+++ A+R+FD M + +S NSM+ G+A HG+G EAL F M T++ P
Sbjct: 322 SLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQP 381
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
ITF+ VL+AC+H G V EG+K F ++ ++G + EHY CM+DLL RAG L +A
Sbjct: 382 DEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREF 441
Query: 494 IEAMPFNP-----GS------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
I MP P GS + +AA L+LEP+N Y++L+NIYA W
Sbjct: 442 IRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMW 501
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
EV +R LM ++G+QK PG S + + H F+A D SHP I EI L ++ K+K A
Sbjct: 502 NEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLA 561
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GYV D KE+ + HSEKLA+ +GLL + G I+++KNLR+C DCH I
Sbjct: 562 GYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLI 621
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K +S I R+IT+RD RFH FKDG CSC DYW
Sbjct: 622 KLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 208/448 (46%), Gaps = 57/448 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + GK LH +K ++ Y+ + +Y+ CG L +A
Sbjct: 81 TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA------- 133
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R LF+++ + V + ++IS Y AL L+K
Sbjct: 134 ------------------------RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYK 169
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E F D T++ L++A + +L + +LH A + ++L+ Y++ G
Sbjct: 170 KMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCG 229
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM----YTL 234
L A++VF ++ + KD +W++++ Y ++ EALQLF+E+ G +M T+
Sbjct: 230 DLKTARQVFDKLSD-KDVYAWSALIFGYVKNNRSTEALQLFREVAG---GSNMRPNEVTI 285
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++++A L DL G H ++ ++ + + + LID+++KC GD+ ++F+ +
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC-GDIDAAKRIFDSMS 344
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
DL+ WN+M++G++ +AL F+ + PD+ +F+ V++ACS+ L ++
Sbjct: 345 YKDLISWNSMVNGFAL-HGLGREALAQFRLMQTTDLQPDEITFIGVLTACSH--AGLVQE 401
Query: 355 IHALTIKIE-IRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG- 409
L +IE + R+ + +V + + G L +AR MP + + SM+
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461
Query: 410 --YAQHGIGMEALRLFEWMLETNIPPTN 435
Y +G EA R + PTN
Sbjct: 462 RVYNNLELGEEAARFL-----LKLEPTN 484
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/680 (35%), Positives = 370/680 (54%), Gaps = 52/680 (7%)
Query: 46 KCGCLSAAH---HAFNQTQ--HANVFSFNVL---------LAA-YARQLRIASARQLFDQ 90
+CG L + +F Q Q HA++ SF++L LAA YA ++ A +FD
Sbjct: 61 QCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDG 120
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LI 148
I + +N +I YA G +L L+++M D FT ++ A + L +
Sbjct: 121 IVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIG 180
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H + CG + V NSLL Y++ G + A+ VF M E +D SWN+M+ Y +
Sbjct: 181 RRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE-RDLTSWNTMISGYAK 239
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF-HQNSH 267
+ + A +F M L D TL +L+A L+ + G H + +++ + N
Sbjct: 240 NADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKF 299
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ LI++Y C+ M D ++FE + D V WN+MI GY++ + + ++L F+++
Sbjct: 300 FTNSLIEMYCNCNC-MVDARRLFERVRWKDTVSWNSMILGYARNGD-AFESLRLFRRMAL 357
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G PD +F+ V+ AC ++ G IH+ +K +N I V ALV MYSKCG+L
Sbjct: 358 DGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTI-VGTALVDMYSKCGSLA 416
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+RR+FD MP+ + VS ++M+AGY HG G EA+ + + M ++ P N F S+LSAC+
Sbjct: 417 CSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACS 476
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
H G V EG++ F M+ + +P HYSCM+DLLGRAG L +A +I M P S
Sbjct: 477 HAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIW 536
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A +A + P Y+ L+NIYAA +W++V +R ++R +
Sbjct: 537 AALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRK 596
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
G++K PG S+IE+ +H F+ D SH ++I+ L E+ +++K+AGY PD
Sbjct: 597 GLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDV 656
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KEK L HSE+LA+AF L++T G I + KNLR+CGDCH K IS + GREI +
Sbjct: 657 EEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIM 716
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD +RFH F G CSCGDYW
Sbjct: 717 RDIHRFHHFIKGFCSCGDYW 736
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 127/236 (53%), Gaps = 12/236 (5%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCS 280
+ SLQ G ++L +FT+ + G Q HAH+I S N+++ + L YA C
Sbjct: 57 LTSLQCG-------ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGC- 108
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
G M +F+ I + LWN MI GY+ ++L ++++ G D+ ++ V
Sbjct: 109 GLMSQAEVIFDGIVLKNSFLWNFMIRGYAS-NGLPMKSLVLYREMLCFGQRADNFTYPFV 167
Query: 341 ISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+ AC + L +G+++H+ + + S+ I V N+L+AMY+K G++ AR +FDRM E +
Sbjct: 168 LKACGDLLLVEIGRRVHSEVVVCGLESD-IYVGNSLLAMYAKFGDMGTARMVFDRMAERD 226
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
S N+MI+GYA++ A +F+ M + + T + +LSACA V EG+
Sbjct: 227 LTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGK 282
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G S+H+ +K + + + +YSKCG L+ + F++
Sbjct: 366 TFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEM 425
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ S++ ++A Y R A + D + PD + +++SA + G
Sbjct: 426 PDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGK 485
Query: 117 SLFKDMREKRFDT 129
+F M EK ++
Sbjct: 486 EIFYKM-EKEYNV 497
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/687 (34%), Positives = 376/687 (54%), Gaps = 73/687 (10%)
Query: 62 HANVFSFNVLLAAYA---RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
H +FS + L++ ++ + + +R LF QI P+L +NT+I Y+ + A+ L
Sbjct: 38 HHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVL 97
Query: 119 FKDMREKRF-DTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ M K + FT L+ + + ++L ++H I GF+ V N+L+ YS
Sbjct: 98 YMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYS 157
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G L+ A+ +F E ++D VS+N+M+ Y + + AL LF EM + + D +T
Sbjct: 158 VFGNLNLARTLFDE-SLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFV 216
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKS--GFHQNSHIGSGLIDLYAKCS------------- 280
++ + + L + G Q HA + K+ N + S ++D+YAKC
Sbjct: 217 ALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMG 276
Query: 281 ------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
G++ K+F + + D++ W MISGYSQ + S +AL F
Sbjct: 277 TSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCS-EALELF 335
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
K++ +G PD+ + V V+SAC+ L LGK+++ I+ + + + A++ MY+K
Sbjct: 336 KEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAK 395
Query: 382 CGNLEDARRLFDRMPEHNTVSL--NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
CG+++ A +F R+ ++ NSMIAG AQHG+G A+ +F ++ T + P +TFV
Sbjct: 396 CGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFV 455
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
VL AC H+G + EG+K F M + +G +P+ EHY CM+DLLGR G L +A L++ MPF
Sbjct: 456 GVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPF 515
Query: 500 NPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
S+ + A L++E + YV+L+NI A + +WEE +
Sbjct: 516 EANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQV 575
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-- 600
R++M D G++K PG+S+IE+ +H FVA D SHP KEI L++M+ ++K AGYVP
Sbjct: 576 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 635
Query: 601 ----------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+KE + +HSEKLA+AFGL+ S + I ++KNLRIC DCH A K +S I
Sbjct: 636 AQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEI 695
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
GREITVRDT RFH F++G CSC D+W
Sbjct: 696 YGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 155/339 (45%), Gaps = 27/339 (7%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMK-VFEEI 293
S L S + GLQ HA I +G H S LI ++ S D D + +F +I
Sbjct: 11 SSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
P+L +WNTMI GYS+ + + + + + P++ +F ++++C+ LS G
Sbjct: 71 DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
++H+ IK S+ + V NAL+ +YS GNL AR LFD + VS N+MI GYA+
Sbjct: 131 HEVHSHIIKHGFESD-LFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGF 467
AL LF M + I P TFV++ S C+ + GK Q Y K++
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVY----KNLRSI 245
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK--------------AANHFL 513
+ S ++D+ + G + AER+ M + + A A F
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + + + + + Y+ +G+ E + + M G++
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/659 (36%), Positives = 354/659 (53%), Gaps = 72/659 (10%)
Query: 52 AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
A H + +V +N L+A Y + R+ ARQ+FD +P + VS N L+S YA G
Sbjct: 37 AVHARVVRAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGR 96
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNS 169
AL+L +R F + + LS + A+++ + + +Q H AI G + V ++
Sbjct: 97 HRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSA 153
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-HREGLEALQLFQEMVSLQLG 228
+L Y + +DEA V Y + H E A+
Sbjct: 154 VLHMYCQCAHMDEA--------------------VKYSKKHGEKCRAM------------ 181
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ +L S +++V G Q H +K N ++GS L+D+Y KC + +
Sbjct: 182 -GSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP-HEANR 239
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
VFE +P+ ++V W +++ Y+Q E + D AL F + G P++ ++ +++C+ L+
Sbjct: 240 VFEVLPEKNIVSWTAIMTAYTQNELFED-ALQLFLDMEMEGVRPNEFTYAVALNSCAGLA 298
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
G + A T+K + V NAL+ MYSK G++EDARR+F MP + VS NS+I
Sbjct: 299 TLKNGNALGACTMKTG-HWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSII 357
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
GYA HG EA+ F ML P+ +TF+ VLSACA G V EG Y ++M G
Sbjct: 358 IGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGV 417
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------AN 510
+P EHY+CM+ LL R G+L +AER IE+ +A ++ A
Sbjct: 418 KPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAE 477
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
QL+P + YV+L+N+YA + +W+ V +RRLMR+ GV+K+PG SWI+V ++HVF
Sbjct: 478 QIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFT 537
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
+ED HP +++I L+E+ K+K GYVP+ KE+ L++HSEKLA+AFG
Sbjct: 538 SEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFG 597
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ T GE I +MKN+RIC DCH AIK IS GR I VRDT RFHC +DG CSC DYW
Sbjct: 598 LIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 47/421 (11%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
+L GK++HA ++ F N+ I LY KCG L A F+ N S N+L++
Sbjct: 31 ELSLGKAVHARVVRA-ARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 74 AYARQ---------LRIAS-----------------------ARQLFDQIPQPDLVSYNT 101
YA LR+A RQ + L +
Sbjct: 90 GYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPY 149
Query: 102 LISA----YADCGDTESALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLA 155
+ SA Y C + A+ K EK + ++ AS+ + L Q+H A
Sbjct: 150 VCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQA 209
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
+ + V ++L+ Y + F EA RVF + E K+ VSW +++ AY Q+ +A
Sbjct: 210 LKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPE-KNIVSWTAIMTAYTQNELFEDA 268
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
LQLF +M + + +T A L + L L G A +K+G + + L+++
Sbjct: 269 LQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNM 328
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y+K SG + D +VF +P D+V WN++I GY+ + +A+ F + P
Sbjct: 329 YSK-SGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGR-AREAMEAFHDMLFAEEVPSYV 386
Query: 336 SFVCVISACSNLSPSLGKQIHALTI---KIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+F+ V+SAC+ L + + + L I ++ ++ + +V + + G L++A R
Sbjct: 387 TFIGVLSACAQLGL-VDEGFYYLNIMMKEVGVKPGK-EHYTCMVGLLCRVGRLDEAERFI 444
Query: 393 D 393
+
Sbjct: 445 E 445
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 44/248 (17%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+VL C +++V G +H LK + + Y+ + + +Y KC A+ F
Sbjct: 188 RVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK 247
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ S+ ++ AY + +LF E AL LF DM
Sbjct: 248 NIVSWTAIMTAYTQN-------ELF------------------------EDALQLFLDME 276
Query: 124 EKRFDTDGFT-------LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ + FT +GL T + N L + G V N+L+ YS+
Sbjct: 277 MEGVRPNEFTYAVALNSCAGLATLKNGN-----ALGACTMKTGHWGLLPVCNALMNMYSK 331
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G +++A+RVF M +D VSWNS+++ Y H EA++ F +M+ + T
Sbjct: 332 SGSVEDARRVFLSM-PCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIG 390
Query: 237 ILTAFTSL 244
+L+A L
Sbjct: 391 VLSACAQL 398
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 44/230 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN----LVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T+ L +C G L G +L A +K L+P L N +YSK G + A
Sbjct: 286 TYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMN----MYSKSGSVEDARRV 341
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLF-DQIPQPDLVSYNTLISAYADCGDTESA 115
F +V S+N ++ YA R A + F D + ++ SY T I + C +
Sbjct: 342 FLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSAC----AQ 397
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L L +GF ++ + + G +HY + L
Sbjct: 398 LGLVD---------EGFYYLNIMMKE------------VGVKPGKEHYTCMVGLL----C 432
Query: 176 RNGFLDEAKRVFYEMGEI-KDEVSWNSMVVAYGQHRE-GLE---ALQLFQ 220
R G LDEA+R F E I D V+W S++ + +R GL A Q+FQ
Sbjct: 433 RVGRLDEAER-FIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQ 481
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 364/649 (56%), Gaps = 41/649 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ AY +A A+Q+F P ++VS+ LIS A A+ +F++M
Sbjct: 55 NTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMT 114
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
F + T+S ++ A +N L LI K +HC + GF+ V +L+ YS+ G +
Sbjct: 115 MGNFKPNAVTISSVLPAFAN-LGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCM 173
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+++F M E ++ VSWN++V Y H EA+ LF M L +D YT+ S++ A
Sbjct: 174 GVARQLFESMSE-RNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPA 232
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+ L G H +I++G+ + HI + L+D+Y + D +VF E+ D+
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS-HNCVDDAHRVFSEMFVKDVAA 291
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSL--GKQIHA 357
W M++G+S + D+A+ F K+ + D + ++S+CS+ S +L G+++HA
Sbjct: 292 WTLMLTGFSSGRHW-DRAIKHFNKMLGIQNLKLDSIVLMGILSSCSH-SGALQQGRRVHA 349
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK +N I V +A++ MY+ CGNLEDA+R F M E + V N+MIAG +G G
Sbjct: 350 LAIKTCF-ANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGT 408
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A+ LF M + + P TFVSVL AC+H G V EG + F M P +HY+C+
Sbjct: 409 DAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACV 468
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNA 520
ID+LGRAG+L A I MPF P G+I L + + ++EP++A
Sbjct: 469 IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDA 528
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YA +G WE V R +R + ++K PGFS IE+ ++++ F+A + HP
Sbjct: 529 GYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYF 588
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I L+ + K+K+AGYVP+ K+ L HHSEK+A+AFGL+ T G I
Sbjct: 589 KIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTII 648
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR C DCH+A KF+S + GR + ++D RFH F+DG CSC DYW
Sbjct: 649 RITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
ASIL L+DL Q HA +I SG N+ + + L++ Y C G + D ++F P
Sbjct: 28 ASILR---KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYC-GLLADAKQIFHHTP 83
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGK 353
++V W +ISG ++ + + +A+ F+++ + P+ + V+ A +NL + K
Sbjct: 84 CKNVVSWTILISGLAKNDCFV-EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+H ++ N + V ALV MYSK G + AR+LF+ M E N VS N++++GY+ H
Sbjct: 143 SVHCFWVRGGFEGN-VFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDH 201
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG--KVAEGQKYFSMMKDMFGFEPEG 471
G EA+ LF M + T +S++ A G +V G F + G+E +
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT---GYENDK 258
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ + DA R+ M
Sbjct: 259 HIKTALMDIYVSHNCVDDAHRVFSEM 284
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/657 (35%), Positives = 359/657 (54%), Gaps = 42/657 (6%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A + N F + +++ + +I A+++FD +P D+V +N++I Y G + A
Sbjct: 156 AVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVA 215
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
LF +M T++ LI A NL L K +H + G + V S +
Sbjct: 216 FQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDM 275
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDM 231
YS+ G ++ A+ VFY+M ++ VSWN+M+ G R GL E+ LF +V G D+
Sbjct: 276 YSKMGDIESARWVFYKM-PTRNLVSWNAMI--SGCVRNGLVGESFDLFHRLVRSSGGFDL 332
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ S+L + L G H I+S F N + + ++DLY+KC G ++ VF
Sbjct: 333 TTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKC-GSLKQATFVFN 390
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
+ +++ W M+ G +Q +++ AL F ++ G + +FV ++ +C++L S
Sbjct: 391 RMKDRNVITWTAMLVGLAQNG-HAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLK 449
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAG 409
G+ IH ++ + +++ ALV MY+KCG + A R+F V L NSMI G
Sbjct: 450 RGRSIHGHLFRLGFAFDIVNMT-ALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITG 508
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y HG G +A+ ++ M+E + P TF+S+LSAC+H+ V +G F+ M+ P
Sbjct: 509 YGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRP 568
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHF 512
+HY+C++DLL RAG+ +A+ LIE MPF PG+ L+A ++
Sbjct: 569 IEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKL 628
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L L+ N Y+ML+NIYA + +W++V IR LMR+RG++K PG+S +E +H F A
Sbjct: 629 LALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAG 688
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D SHP +EI+++LE + ++ +GYVPD K + L HSE+LA+AFGLL
Sbjct: 689 DNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLL 748
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+T G I + KNLR+CGDCH K+IS I REI VRD RFH F +G CSCGDYW
Sbjct: 749 TTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 224/438 (51%), Gaps = 14/438 (3%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AY+ + +AR +FDQ QP + N ++ Y G L LF MR + + D
Sbjct: 70 LVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVD 129
Query: 131 GFTLSGLITASSNNLCLIKQLHCL--AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ + + A +++L + + A+ G + V +S+++ + G + EA+RVF
Sbjct: 130 SCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFD 189
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M KD V WNS++ Y Q A QLF EM + T+ S++ A + +L
Sbjct: 190 GMPN-KDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLK 248
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H +++ G + + + +D+Y+K GD+ VF ++P +LV WN MISG
Sbjct: 249 LGKCMHGYVLGLGLGNDILVLTSFVDMYSKM-GDIESARWVFYKMPTRNLVSWNAMISG- 306
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN 367
+ ++ F +L R D + V ++ CS S + GK +H I+ SN
Sbjct: 307 CVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESN 365
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
I ++ A+V +YSKCG+L+ A +F+RM + N ++ +M+ G AQ+G +ALRLF M
Sbjct: 366 LI-LSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQ 424
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
E I ++TFVS++ +CAH G + G+ + + GF + + + ++D+ + GK+
Sbjct: 425 EEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL-GFAFDIVNMTALVDMYAKCGKI 483
Query: 488 TDAERLIEAMPFNPGSIA 505
AER+ F+ GSI+
Sbjct: 484 NLAERI-----FSHGSIS 496
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 41/313 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C L TGK LH +++ + LS + LYSKCG L A FN+
Sbjct: 334 TIVSLLQGCSQTASLATGKILHGCAIRSFES-NLILSTAIVDLYSKCGSLKQATFVFNRM 392
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV ++ +L A+ G E AL LF
Sbjct: 393 KDRNVITWTAMLVGLAQN-------------------------------GHAEDALRLFA 421
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E+ + T L+ + ++ +L + +H GF +L+ Y++ G
Sbjct: 422 QMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCG 481
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+R+F KD V WNSM+ YG H G +A+ ++ +M+ L + T S+L
Sbjct: 482 KINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLL 541
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG---SGLIDLYAKCSGDMRDCMKVFEEIP- 294
+A + + G+ + + H I + L+DL ++ +G + + E++P
Sbjct: 542 SACSHSRLVEQGISLFNSMERD--HNIRPIEKHYACLVDLLSR-AGRFEEAQALIEKMPF 598
Query: 295 QPDLVLWNTMISG 307
QP + ++SG
Sbjct: 599 QPGTAVLEALLSG 611
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K HA I + +++ V LV YS +LE AR +FD+ + + N+M+ GY Q
Sbjct: 49 KSTHAQIITNSLSTDQF-VATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQ 107
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G E L LF M N+ + + L ACA + G + S + G E
Sbjct: 108 SGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEK-GMEKNRF 166
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMP 498
S MI L + GK+ +A+R+ + MP
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGMP 192
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 358/652 (54%), Gaps = 44/652 (6%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
QH N F L+ + +I AR+LFD+ PD+ +N +I +Y+ + +++
Sbjct: 85 QH-NGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYR 143
Query: 121 DMREKRFDTDGFTLSGLITASSNNL-----CLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
MR DGFT ++ A + L C+I H I GF V N L+ Y+
Sbjct: 144 WMRWTGVHPDGFTFPYVLKACTELLDFGLSCII---HGQIIKYGFGSDVFVQNGLVALYA 200
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + AK VF + + VSW S++ Y Q+ + +EAL++F +M + + D L
Sbjct: 201 KCGHIGVAKVVFDGLYH-RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALV 259
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SIL A+T ++DL G H +IK G + L YAKC G + F+++
Sbjct: 260 SILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKC-GLVTVAKSFFDQMKT 318
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
++++WN MISGY+ K ++++A+ F + PD + + A + + S L +
Sbjct: 319 TNVIMWNAMISGYA-KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQW 377
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+ K S+ I VN +L+ MY+KCG++E ARR+FDR + + V ++MI GY HG
Sbjct: 378 MDDYVSKSNYGSD-IFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G EA+ L+ M + + P ++TF+ +L+AC H+G V EG + F MKD F P EHY
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD-FEIVPRNEHY 495
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP 517
SC++DLLGRAG L +A I +P PG ++ AAN L+P
Sbjct: 496 SCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDP 555
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N YV L+N+YA+S W+ VA +R LMR++G+ K G+S IE+ ++ F D SHP
Sbjct: 556 YNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHP 615
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
M KEI + L+ + R++K+ G+VP +KE+ L HSE++AVA+GL+ST+ G
Sbjct: 616 MAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPG 675
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLR C +CH+AIK IS + REI VRD RFH FKDG CSCGDYW
Sbjct: 676 TTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 156/350 (44%), Gaps = 40/350 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C D +H +K ++ N + LY+KCG + A F+
Sbjct: 156 TFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGL 215
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
H + S+ +++ YA+ + A ++F Q+ +PD ++ +++ AY D D E
Sbjct: 216 YHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQG- 274
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ +H I G + ++ SL Y++
Sbjct: 275 --------------------------------RSIHGFVIKMGLEDEPALLISLTAFYAK 302
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + AK F +M + + + WN+M+ Y ++ EA+ LF M+S + D T+ S
Sbjct: 303 CGLVTVAKSFFDQM-KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRS 361
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ A + L ++ KS + + + + LID+YAKC G + +VF+
Sbjct: 362 AVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKC-GSVEFARRVFDRNSDK 420
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
D+V+W+ MI GY + +A+ + + + G P+D +F+ +++AC++
Sbjct: 421 DVVMWSAMIMGYGLHGQ-GWEAINLYHVMKQAGVFPNDVTFIGLLTACNH 469
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 255/768 (33%), Positives = 389/768 (50%), Gaps = 125/768 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G + H L N + ++ N + +YS+CG L
Sbjct: 164 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE--------- 214
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ---PDLVSYNTLISAYADCGDTESALS 117
A +FD+I Q D++S+N+++SA+ + +AL
Sbjct: 215 ----------------------EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 252
Query: 118 LFKDM----REKRFD--TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
LF M EK + +D ++ ++ A S + K++H AI G V N+
Sbjct: 253 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA 312
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y++ G ++ A +VF M E KD VSWN+MV Y Q A +LF+ M + L
Sbjct: 313 LIDAYAKCGLMENAVKVF-NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 371
Query: 230 DM-----------------------------------YTLASILTAFTSLEDLVGGLQFH 254
D+ T+ S+L+A SL G + H
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431
Query: 255 AHLIKS----------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWN 302
A+ +K+ G ++ + + LID+Y+KC + +F++IP + ++V W
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR-SFKAARSIFDDIPLEERNVVTWT 490
Query: 303 TMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
MI G++Q + S+ AL F ++ G P+ + C++ AC++L+ +GKQIHA
Sbjct: 491 VMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 549
Query: 360 IK-IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ S+ V N L+ MYSKCG+++ AR +FD M + + +S SM+ GY HG G E
Sbjct: 550 LRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 609
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F+ M + P +ITF+ VL AC+H G V +G YF M +G P EHY+C I
Sbjct: 610 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAI 669
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAV 521
DLL R+G+L A R ++ MP P ++ A A N +++ N
Sbjct: 670 DLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 729
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
Y +++NIYA +G+W++VA IR LM+ G++K+PG SW++ +K F D SHP+ +
Sbjct: 730 SYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQ 789
Query: 582 IHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGEPIL 629
I+ LE + ++K GYVP D+E++ LV HSEKLA+A+GLL+TS G PI
Sbjct: 790 IYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIR 849
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+A +IS I EI VRD RFH FK+G CSCG YW
Sbjct: 850 ITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 168/389 (43%), Gaps = 58/389 (14%)
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
S+ ++ Y G D A V E V WN ++ + + A+ + M+
Sbjct: 97 SLGTGVVASYLACGATDYALLVL-ERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
D +TL +L A L G FH + +GF N I + L+ +Y++C G +
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC-GSLE 214
Query: 285 DCMKVFEEIPQ---PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH------PDDC 335
+ +F+EI Q D++ WN+++S + K + AL F K+ + + D
Sbjct: 215 EASMIFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERSDII 273
Query: 336 SFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
S V ++ AC +L + K++H I+ + + V NAL+ Y+KCG +E+A ++F+
Sbjct: 274 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPD-VFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP---------------------- 432
M + VS N+M+AGY+Q G A LF+ M + NIP
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 433 -------------PTNITFVSVLSACAHTGKVAEGQK---------YFSMMKDMFGFEPE 470
P +T +SVLSACA G ++G + ++ D G + +
Sbjct: 393 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 452
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
Y+ +ID+ + A + + +P
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPL 481
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 255/768 (33%), Positives = 389/768 (50%), Gaps = 125/768 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G + H L N + ++ N + +YS+CG L
Sbjct: 157 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE--------- 207
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ---PDLVSYNTLISAYADCGDTESALS 117
A +FD+I Q D++S+N+++SA+ + +AL
Sbjct: 208 ----------------------EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 245
Query: 118 LFKDM----REKRFD--TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
LF M EK + +D ++ ++ A S + K++H AI G V N+
Sbjct: 246 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA 305
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y++ G ++ A +VF M E KD VSWN+MV Y Q A +LF+ M + L
Sbjct: 306 LIDAYAKCGLMENAVKVF-NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 364
Query: 230 DM-----------------------------------YTLASILTAFTSLEDLVGGLQFH 254
D+ T+ S+L+A SL G + H
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424
Query: 255 AHLIKS----------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWN 302
A+ +K+ G ++ + + LID+Y+KC + +F++IP + ++V W
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR-SFKAARSIFDDIPLEERNVVTWT 483
Query: 303 TMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
MI G++Q + S+ AL F ++ G P+ + C++ AC++L+ +GKQIHA
Sbjct: 484 VMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 542
Query: 360 IK-IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ S+ V N L+ MYSKCG+++ AR +FD M + + +S SM+ GY HG G E
Sbjct: 543 LRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 602
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F+ M + P +ITF+ VL AC+H G V +G YF M +G P EHY+C I
Sbjct: 603 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAI 662
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAV 521
DLL R+G+L A R ++ MP P ++ A A N +++ N
Sbjct: 663 DLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 722
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
Y +++NIYA +G+W++VA IR LM+ G++K+PG SW++ +K F D SHP+ +
Sbjct: 723 SYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQ 782
Query: 582 IHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGEPIL 629
I+ LE + ++K GYVP D+E++ LV HSEKLA+A+GLL+TS G PI
Sbjct: 783 IYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIR 842
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+A +IS I EI VRD RFH FK+G CSCG YW
Sbjct: 843 ITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 169/389 (43%), Gaps = 58/389 (14%)
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
S+ ++ Y G D A V E V WN ++ + + A+ + M+
Sbjct: 90 SLGTGVVASYLACGATDYALLVL-ERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
D +TL +L A L G FH + +GF N I + L+ +Y++C G +
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC-GSLE 207
Query: 285 DCMKVFEEIPQ---PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH------PDDC 335
+ +F+EI Q D++ WN+++S + K + AL F K+ + + D
Sbjct: 208 EASMIFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERSDII 266
Query: 336 SFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
S V ++ AC +L + K++H I+ + + V NAL+ Y+KCG +E+A ++F+
Sbjct: 267 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPD-VFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP---------------------- 432
M + VS N+M+AGY+Q G A LF+ M + NIP
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 433 -------------PTNITFVSVLSACAHTGKVAEGQKYFS--------MMKDMFGFEPEG 471
P +T +SVLSACA G ++G + + + + FG E E
Sbjct: 386 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 445
Query: 472 EH-YSCMIDLLGRAGKLTDAERLIEAMPF 499
Y+ +ID+ + A + + +P
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPL 474
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 341/661 (51%), Gaps = 116/661 (17%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLR--------IASARQLFDQIPQPDLVSYNTLISAYA 107
A Q +N LLA YAR R +A AR LFD+IP+PD VSYNTL+S +
Sbjct: 34 ASTTPQRKTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHF 93
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
GD A LF M A++ N+ +
Sbjct: 94 AAGDVRGARDLFAAM----------------PATARNV-------------------TSW 118
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N++L+ SR+G + EA+ VF M ++ +SWN+MV + + A + F++ +
Sbjct: 119 NTMLSGLSRSGAVGEARAVFLAM-PARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKEN 177
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
A + TA S G +D SG + M
Sbjct: 178 -------AVLWTAMVS---------------------------GYMD-----SGHVEKAM 198
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSN 346
+ FE +P LV WN +++GY K ++ AL FK + R P++ + V+ CSN
Sbjct: 199 QFFEAMPVRSLVSWNAVVAGYV-KNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSN 257
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
LS G+Q+H K+ + S R++ +LV+MY KCG+L+ A +LF M + ++ N+
Sbjct: 258 LSALGFGRQVHQWCTKLPL-SRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNA 316
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI+GYA HG G EA+ LFE M + P ITFV+VL+AC HTG G + F M++++
Sbjct: 317 MISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVY 376
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI------------ALKA 508
G E +HYSCM+DLL RAG L A LI +MPF P G++ A A
Sbjct: 377 GIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFA 436
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A ++ P NA YV LANIYA + +W +V+ +RR M+D V K PG+SW+E+ +HV
Sbjct: 437 AGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHV 496
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F + D HP + IH L ++ +MK GYVPD K + L+ HSEKLA+A
Sbjct: 497 FRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIA 556
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGLLST+ G + + KNLR+CGDCH A K IS I REI +RDT RFH F+ G CSCGDY
Sbjct: 557 FGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDY 616
Query: 677 W 677
W
Sbjct: 617 W 617
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 49/303 (16%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
+N V ++A +S Y G + A F ++ S+N ++A Y + R
Sbjct: 176 ENAVLWTAMVSG-----YMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSR------ 224
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLITASSN-- 143
E AL +FK M R+ + TLS ++ SN
Sbjct: 225 -------------------------AEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLS 259
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
L +Q+H + SL++ Y + G LD A ++F EM I+D ++WN+M+
Sbjct: 260 ALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEM-RIRDVIAWNAMI 318
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA--FTSLEDLVGGLQFHAHLIKS- 260
Y H +G EA++LF++M S + + T ++LTA T + D G+Q + +
Sbjct: 319 SGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDF--GMQCFERMQEVY 376
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI--SGYSQKEEYSDQ 317
G S ++DL + +G + + + +P QP + T++ S + E+++
Sbjct: 377 GIEARVDHYSCMVDLLCR-AGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEF 435
Query: 318 ALG 320
A G
Sbjct: 436 AAG 438
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G+ +H K + + +Y KCG L A F++
Sbjct: 247 TLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEM 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ +V ++N +++ YA A +LF+++ +P+ +++ +++A G + +
Sbjct: 307 RIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGM 366
Query: 117 SLFKDMRE 124
F+ M+E
Sbjct: 367 QCFERMQE 374
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/654 (37%), Positives = 352/654 (53%), Gaps = 70/654 (10%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
FN + H N L+ AYA + AR +FD IP+ +++ YN +I +Y + + A
Sbjct: 58 VFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDA 117
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
L +F+DM F D +T ++ A S +NL + QLH G D V N L+
Sbjct: 118 LLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIAL 177
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y + G L EA+ V EM + KD VSWNSMV Y Q+ + +AL + +EM ++ D T
Sbjct: 178 YGKCGCLPEARCVLDEM-QSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACT 236
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+AS+L A T+ +N LY + ++F +
Sbjct: 237 MASLLPAVTNTSS-----------------ENV--------LYVE---------EMFMNL 262
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-G 352
+ LV WN MIS Y K +++ + ++ + PD + V+ AC +LS L G
Sbjct: 263 EKKSLVSWNVMISVY-MKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLG 321
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
++IH + ++ N + + N+L+ MY++CG LEDA+R+FDRM + S S+I+ Y
Sbjct: 322 RRIHEYVERKKLCPNML-LENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGM 380
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G A+ LF M + P +I FV++LSAC+H+G + EG+ YF M D + P E
Sbjct: 381 TGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIE 440
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQL 515
H++C++DLLGR+G++ +A +I+ MP P I + AA+ LQL
Sbjct: 441 HFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQL 500
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
P + YV+L+NIYA +G+W EV IR LM+ R ++K PG S +E+ Q+H F+A D
Sbjct: 501 APEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTY 560
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTS 623
HP KEI+ L + KMK+ GYVP DKE L HSEKLA+ F +L+T
Sbjct: 561 HPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQ 620
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI + KNLR+CGDCH A K IS I REI +RDT RFH FKDG CSCGDYW
Sbjct: 621 -ESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 176/411 (42%), Gaps = 51/411 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C +L G LH K + + ++ N I LY KCGCL A ++
Sbjct: 135 TYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEM 194
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
Q +V S+N ++A YA+ ++ A
Sbjct: 195 QSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLY 254
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
++F + + LVS+N +IS Y ++ L+ M + + D T + ++ A +
Sbjct: 255 VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGD 314
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L +++H + NSL+ Y+R G L++AKRVF M + +D SW S
Sbjct: 315 LSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRM-KFRDVASWTS 373
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ AYG +G A+ LF EM + D +IL+A S L+ +F+ +
Sbjct: 374 LISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSA-CSHSGLLNEGKFYFKQMTDD 432
Query: 262 FHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQA 318
+ I + L+DL + SG + + + +++P +P+ +W ++S YS+
Sbjct: 433 YKITPIIEHFACLVDLLGR-SGRVDEAYNIIKQMPMKPNERVWGALLSSC---RVYSNMD 488
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
+G + P++ + ++ SN+ G+ I+ ++ RI
Sbjct: 489 IGILAADKLLQLAPEESGYYVLL---SNIYAKAGRWTEVTAIRSLMKRRRI 536
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L +L + ++ L H+ + FH+N +G L+ YA G+ VF+ I
Sbjct: 38 LGKVLDQYPDIKTLK---NVHSKVFNLSFHENPSLGIKLMRAYA-ARGEPGLARNVFDVI 93
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS---NLSPS 350
P+ +++ +N MI Y Y D AL F+ + G+ PD ++ CV+ ACS NL
Sbjct: 94 PERNVIFYNVMIRSYMNNHLY-DDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLR-- 150
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G Q+H K+ + N + V N L+A+Y KCG L +AR + D M + VS NSM+AGY
Sbjct: 151 IGLQLHGAVFKVGLDLN-LFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGY 209
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
AQ+ +AL + M P T S+L A +T
Sbjct: 210 AQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNT 247
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/783 (31%), Positives = 385/783 (49%), Gaps = 110/783 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C G+ D+ GKS+H + +K + ++ N I LY KCG L A F++
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ------PDLVSY--------------- 99
N+ S+N L+ ++ A + F + + PD+ +
Sbjct: 272 PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331
Query: 100 --------------------NTLISAYADCGDTESALSLFKD------------------ 121
N LI Y+ CG A LF+
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391
Query: 122 ---------------MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYA 164
M E+ + + T+ L+ A + L ++ LH ++ F +
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
+NN+ + Y++ G L A+ VF+ M K SWN+++ + Q+ + ++AL + EM
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGM-NTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L + D +++ S+L A L L G + H ++++G NS + L+ LY CS
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
FE + + V WN M+SGYSQ E ++AL F+++ G PD+ + ++ AC
Sbjct: 571 G-RTYFERMGDKNSVCWNAMLSGYSQN-ELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S LS LGK++H +K + + V +L+ MY+K G L ++R+F+R+ S
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNF-VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASW 687
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N MI G+ HG G +A+ LFE M ++ P TF+ VL AC H G V+EG Y + M+
Sbjct: 688 NVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQT 747
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
++ EPE EHY+C+ID+LGRAG+L +A I MP P + +
Sbjct: 748 LYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGE 807
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
K A L LE + A Y++L+N+YA +GKW+ V +R+ M+D +QK G SWIE++ ++
Sbjct: 808 KFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKV 867
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
+ F+A + S+P EI + +++ + GY PD K K L HSEK+A
Sbjct: 868 YSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVA 927
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+ FG L+T G + + KNLRIC DCHNA K+IS A REI +RD RFH FK G CSCG
Sbjct: 928 ICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCG 987
Query: 675 DYW 677
DYW
Sbjct: 988 DYW 990
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 221/460 (48%), Gaps = 42/460 (9%)
Query: 5 VLKTCVGRRDLVTGKSL-HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L+ C +++ G+ L L + + L+ I +YS CG + F++ +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+F +N L++ Y R +L+D+ ++ LIS
Sbjct: 173 NLFQWNALVSGYVRN-------ELYDEAIH----TFLELISV------------------ 203
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F D FT LI A + ++ L K +H +A+ G V N+++ Y + GFLD
Sbjct: 204 -TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLD 262
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLASILT 239
EA +F +M E ++ +SWNS++ + ++ LEA + F+ ++ GL D+ T+ ++L
Sbjct: 263 EAVELFDKMPE-QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ ++ G+ H +K G + + LID+Y+KC G + + +F +I +V
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC-GCLSEAAILFRKIENKSVV 380
Query: 300 LWNTMISGYSQKEEYSDQALGCFKK--LNRVGYHPDDCSFVCVISACSNLSPSLG-KQIH 356
WN+MI YS +E + + +K + ++ + + ++ AC S L + +H
Sbjct: 381 SWNSMIGAYS-REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 439
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+++ + + +NNA +A Y+KCG+L A +F M + S N++I G+AQ+G
Sbjct: 440 GYSLRHSFQYKEL-INNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
++AL + M I P + + VS+L AC G + G++
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 135/244 (55%), Gaps = 8/244 (3%)
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+ S F + + + LI +Y+ C + + VF+ + +L WN ++SGY + E Y D+
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRL-VFDRLLNKNLFQWNALVSGYVRNELY-DE 192
Query: 318 ALGCFKKLNRVG-YHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
A+ F +L V + PD+ +F C+I AC+ LGK +H + +K+ + + + V NA+
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMD-LFVGNAM 251
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET--NIPP 433
+A+Y KCG L++A LFD+MPE N +S NS+I G++++G +EA R F +LE+ + P
Sbjct: 252 IALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP 311
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
T V++L C+ G V G M + G E + +ID+ + G L++A L
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKL-GLVHELMVCNALIDMYSKCGCLSEAAIL 370
Query: 494 IEAM 497
+
Sbjct: 371 FRKI 374
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF-E 424
S +N L+ MYS CG ++R +FDR+ N N++++GY ++ + EA+ F E
Sbjct: 140 SGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLE 199
Query: 425 WMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKY-FSMMKDMFGFEPEGEHYSCMI 478
+ T P N TF ++ AC H GK G ++ D+F + MI
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLF-------VGNAMI 252
Query: 479 DLLGRAGKLTDAERLIEAMP 498
L G+ G L +A L + MP
Sbjct: 253 ALYGKCGFLDEAVELFDKMP 272
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/650 (35%), Positives = 370/650 (56%), Gaps = 40/650 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF+ L+ AY R RI+ A ++FD++ + D+ ++N ++S A+ LF M
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMV 161
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ D T+S ++ + L +H A+ G D V N+L+ Y + G L+
Sbjct: 162 GEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLE 221
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+ VF+ M E +D V+WNS++ Q + AL++FQ M + D+ TL S+ +A
Sbjct: 222 EAQCVFHGM-ECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAI 280
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
D H ++++ G+ + I G+ ++D+YAK S ++ ++F+ +P D V
Sbjct: 281 AQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLS-NIEAAQRMFDSMPVQDSVS 339
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WNT+I+GY Q +++A+ + + + G +FV V+ A S+L G ++HAL
Sbjct: 340 WNTLITGYMQNG-LANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHAL 398
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+IKI + + + V L+ +Y+KCG L +A LF++MP +T N++I+G HG G E
Sbjct: 399 SIKIGLNVD-VYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAE 457
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M + I P ++TFVS+L+AC+H G V +G+ +F +M+ + P +HY+CM
Sbjct: 458 ALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMA 517
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
D+LGRAG+L +A I+ MP P S + A+ + +L+P N
Sbjct: 518 DMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 577
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS--HPMI 579
YV+++N+YA GKW+ V +R L+R + +QK PG+S IEVK+ ++VF + + + HP
Sbjct: 578 YYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQH 637
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
+EI L + K++ GYV D KE L +HSE+LA+AFG+++T P
Sbjct: 638 EEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTP 697
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLR+CGDCHNA K+IS I REI VRD+ RFH FKDG CSCGD+W
Sbjct: 698 LHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 205/404 (50%), Gaps = 10/404 (2%)
Query: 100 NTLISAYADCGDTESALSLFKDMRE--KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY 157
NTLI+A++ A L + + F DGFT LI A+ +N QLH A+
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS-AAQLHACALR 95
Query: 158 CGFDHYAS-VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G + + SL+ Y R G + EA +VF EM E +D +WN+M+ ++ EA+
Sbjct: 96 LGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSE-RDVPAWNAMLSGLCRNARAAEAV 154
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
LF MV + D T++S+L L D V L H + +K G + + + LID+Y
Sbjct: 155 GLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVY 214
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
K G + + VF + DLV WN++ISG Q+ + + AL F+ + G PD +
Sbjct: 215 GKL-GMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQ-TAAALKMFQGMRGSGVSPDVLT 272
Query: 337 FVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V + SA + K +H ++ + I NA+V MY+K N+E A+R+FD M
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEG 454
P ++VS N++I GY Q+G+ EA+ + M + + TFVSVL A +H G + +G
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG 392
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + G + +C+IDL + GKL +A L E MP
Sbjct: 393 MRMHALSIKI-GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP 435
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 44/213 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL L G +HAL +K + Y+ I LY+KCG
Sbjct: 375 TFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCG------------ 422
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++A A LF+++P+ +N +IS G AL+LF
Sbjct: 423 -------------------KLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFS 463
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL--AIYCGFD------HYASVNNSLLT 172
M+++ D T L+ A S + L+ Q + +D HYA + + L
Sbjct: 464 RMQQEGIKPDHVTFVSLLAACS-HAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADML-- 520
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
R G LDEA M D W +++ A
Sbjct: 521 --GRAGQLDEAFNFIQNMPIKPDSAVWGALLGA 551
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/588 (38%), Positives = 338/588 (57%), Gaps = 36/588 (6%)
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+R +R D FTL L+ A +L + K H LAI+ G N L+ Y++ G
Sbjct: 47 VRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQ 106
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
D A+RVF M ++ +SWN+M+ Y +RE +EAL+LF M + +TL+S L
Sbjct: 107 NDCARRVFDAMS-VRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLC 165
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + ++ Q H IK +S +G+ +D+YAKC+ ++D VFE +P+ V
Sbjct: 166 ACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNM-IKDACWVFENMPEKTSV 224
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHAL 358
W+++ +G+ Q + ++ L F+ R G + + ++S C++L+ + G Q+HA+
Sbjct: 225 TWSSLFAGFVQNGLH-EEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAV 283
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K N + V +LV +Y+KCG +E + +F M E N V N+MIA +++H E
Sbjct: 284 IVKHGFHRN-LFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWE 342
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A+ LFE M + I P +T++S+LSAC+HTG V EG+ YF+++ EP HYSCM+
Sbjct: 343 AMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMV 402
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
D+LGR+GK +A +L++ MPF P + +A AA +LEP N
Sbjct: 403 DVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGG 462
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
+V+L+N+YAASG WE V R+ +RD G +K+ G SWIE K ++HVFVA + HP I +
Sbjct: 463 NHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITD 522
Query: 582 IHNYLEEMSRKMKQAG------------YVPDKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
++N LEE+ +M++ + KE+ L HHSEKLA AFGL+S PI
Sbjct: 523 VYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPIT 582
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLRICGDCH+ +K +S I R++ VRD RFH FKDG CSCGD+W
Sbjct: 583 IYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 204/415 (49%), Gaps = 37/415 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++L+ C RR L+ GKS H L + + N I LY+KCG
Sbjct: 58 TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCG------------ 105
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + ++S+NT+I+ Y + AL LF
Sbjct: 106 -------------------QNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFS 146
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + FTLS + A + +I KQLH +AI D + V + L Y++
Sbjct: 147 RMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCN 206
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A VF M E K V+W+S+ + Q+ E L LFQ + L +T++SIL
Sbjct: 207 MIKDACWVFENMPE-KTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSIL 265
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ SL ++ G Q HA ++K GFH+N + + L+D+YAKC G + +VF ++ + ++
Sbjct: 266 STCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKC-GQIEKSYEVFADMEEKNV 324
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
VLWN MI+ +S + +S +A+ F+K+ +VG P++ +++ ++SACS+ G+
Sbjct: 325 VLWNAMIASFS-RHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFN 383
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
L + + + +V + + G ++A +L D+MP T S+ + G ++
Sbjct: 384 LLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSR 438
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 363/648 (56%), Gaps = 40/648 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF N L+ YA+ + A+ +F+ + D+VS+NTL++ AL LF +
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHES 293
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R T + +I +N L L +QLH + GF +V +L YS+ G L
Sbjct: 294 RATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGEL 353
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A +F ++ VSW +++ Q+ + A+ LF M ++ + +T +++L A
Sbjct: 354 ADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+ Q HA +IK+ + +G+ L+ Y+K G D + +F+ I Q D+V
Sbjct: 414 SLSILPP----QIHAQVIKTNYQHIPSVGTALLASYSK-FGSTEDALSIFKMIEQKDVVA 468
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHAL 358
W+ M+S ++Q + + A F K+ G P++ + VI AC+ S + G+Q HA+
Sbjct: 469 WSAMLSCHAQAGD-CEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+IK + I V++ALV+MYS+ GN++ A+ +F+R + + VS NSMI+GYAQHG M+
Sbjct: 528 SIKYRYH-DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMK 586
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A+ F M + I +TF++V+ C H G V EGQ+YF M P EHY+CM+
Sbjct: 587 AIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAV 521
DL RAGKL + LI MPF G++ + +A+ L LEP ++
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSS 706
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+NIYAA+GKW+E +R+LM R V+K+ G SWI++K ++H F+A D SHPM +
Sbjct: 707 TYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQ 766
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ L+ + ++KQ GY P+ KE LV HSE+LA+AFGL++T G P+
Sbjct: 767 IYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQ 826
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KNLR+CGDCH +K +S I REI +RD RFH F G CSCGD+W
Sbjct: 827 IVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 230/498 (46%), Gaps = 40/498 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C D V G+ LH C C+ H
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLH------------------------CLCVKCGH------ 130
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
V + L+ Y + + ++F+ +P+ ++V++ +L++ A ++LF
Sbjct: 131 DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFF 190
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + + FT + +++ AS L L +++H ++ G V NSL+ Y++ G
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++AK VF M E +D VSWN+++ + LEALQLF E + + T A+++
Sbjct: 251 LVEDAKSVFNWM-ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVI 309
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIPQPD 297
+L+ L Q H+ ++K GFH ++ + L D Y+KC G++ D + +F +
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC-GELADALNIFSMTTGSRN 368
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
+V W +ISG Q + A+ F ++ P++ ++ ++ A ++ P QIHA
Sbjct: 369 VVSWTAIISGCIQNGDIP-LAVVLFSRMREDRVMPNEFTYSAMLKASLSILP---PQIHA 424
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK + + SV AL+A YSK G+ EDA +F + + + V+ ++M++ +AQ G
Sbjct: 425 QVIKTNYQ-HIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A LF M I P T SV+ ACA + + F + + + S +
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSAL 543
Query: 478 IDLLGRAGKLTDAERLIE 495
+ + R G + A+ + E
Sbjct: 544 VSMYSRKGNIDSAQIVFE 561
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 84 ARQLFDQIPQPDL-VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA-- 140
AR D+IP+ D V N ++ YA G L F R D TLS ++ A
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 141 SSNNLCLIKQLHCLAIYCGFDH-YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
S + L +QLHCL + CG D S SL+ Y + G + E VF M + K+ V+W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK-KNVVTW 169
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
S++ + E + LF M + + + +T AS+L+A S L G + HA +K
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
G + + + L+++YAKC G + D VF + D+V WNT+++G Q E +AL
Sbjct: 230 FGCRSSVFVCNSLMNMYAKC-GLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEAL 287
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK--IEIRSNRISVNNALV 376
F + ++ VI C+NL +L +Q+H+ +K + N V AL
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGN---VMTALA 344
Query: 377 AMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
YSKCG L DA +F N VS ++I+G Q+G A+ LF M E + P
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404
Query: 436 ITFVSVLSA 444
T+ ++L A
Sbjct: 405 FTYSAMLKA 413
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 290 FEEIPQPDLVLW-NTMISGYSQK---EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+EIP+ D + N ++ Y+++ E DQ F R G D + CV+ AC
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQ----FSVARRGGVLVDSATLSCVLKACR 110
Query: 346 NLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
++ LG+Q+H L +K +S +LV MY KCG++ + +F+ MP+ N V+
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
S++ G A + E + LF M I P TF SVLSA A G + GQ+ +
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK- 229
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FG + ++++ + G + DA+ + M
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 23 ALYLKNLVPFSAYLSNHFIL--LYSKCGCLSAA------HHAFN--QTQHANVFSFNVLL 72
A YL N + N F + + C C SA HA + H + + L+
Sbjct: 485 ATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALV 544
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
+ Y+R+ I SA+ +F++ DLVS+N++IS YA G + A+ F+ M DG
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 133 TLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
T +I ++N +++ I +HYA ++ YSR G LDE
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA----CMVDLYSRAGKLDETMS 660
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHR 210
+ +M + W +++ A H+
Sbjct: 661 LIRDMPFPAGAMVWRTLLGACRVHK 685
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 242/664 (36%), Positives = 365/664 (54%), Gaps = 78/664 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-TDGFTLSGLITASS 142
AR LFDQIPQP+L ++NTLI AYA D + +F D+ +K D + FT +I A+S
Sbjct: 78 ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137
Query: 143 NNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+ +H +AI F + NSL+ Y G L A+R+F + KD VSWN
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGIS-CKDVVSWN 196
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
SM+ A+ Q +AL+LF +M + + T+ +L+A DL G +++ +
Sbjct: 197 SMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK 256
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS----- 315
G + + + ++D+Y KC G + D K+F+E+P+ D+ W M+ GY++ +Y
Sbjct: 257 GIKVDLTLCNAMLDMYTKC-GSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLV 315
Query: 316 -------------------------DQALGCFK--KLNRVGYHPDDCSFVCVISACSNLS 348
+AL F +L+++ PD+ + V +SAC+ L
Sbjct: 316 FNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA-KPDEVTLVSTLSACAQLG 374
Query: 349 P-SLGKQIHALTIKIEIRSNRISVN----NALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
LG IH + I+ I +N ++LV MY+KCG+LE A +F + E +
Sbjct: 375 AIDLGGWIH-----VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVW 429
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
++MIAG HG G A+ LF M E + P ++TF +VL AC+H G V EG+ +F M+
Sbjct: 430 SAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEP 489
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------GSIALK------- 507
++G PE +HY+CM+D+LGRAG L +A LI M P G+ +L
Sbjct: 490 VYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGE 549
Query: 508 -AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
A++ L+LEP N V+L+NIYA +G+WE+V+ +R+LMRD ++K+PG S IE +
Sbjct: 550 LASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNV 609
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKL 613
H F+ D +HP+ I++ LEE++ K+K GY P+ KE+ L HSEKL
Sbjct: 610 HEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKL 669
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL++ + +PI V+KNLRICGDCH K +S + R+I +RD YRFH F+DG CSC
Sbjct: 670 AIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSC 729
Query: 674 GDYW 677
DYW
Sbjct: 730 MDYW 733
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 45/381 (11%)
Query: 148 IKQLHCLAIYCG--FDHYASVNNSLLTCYSRNGF--LDEAKRVFYEMGEIKDEVSWNSMV 203
+K++H + G FD +++ + L T + + F LD A+ +F ++ + + +WN+++
Sbjct: 41 LKEVHARMLRTGLFFDPFSA--SKLFTASALSSFSTLDYARNLFDQIPQ-PNLYTWNTLI 97
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
AY + ++ +F +++ L + +T ++ A + L+ G H IK F
Sbjct: 98 RAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSF 157
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ +I + L+ Y C GD+ ++F+ I D+V WN+MIS ++Q D AL F
Sbjct: 158 GMDLYILNSLVRFYGAC-GDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPED-ALELF 215
Query: 323 KKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
K+ R P+ + V V+SAC+ L G+ + + + I+ + +++ NA++ MY+K
Sbjct: 216 LKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVD-LTLCNAMLDMYTK 274
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYA------------------------------ 411
CG+++DA++LFD MPE + S M+ GYA
Sbjct: 275 CGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAY 334
Query: 412 -QHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Q+G EAL +F E L P +T VS LSACA G + G +K G
Sbjct: 335 EQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE-GIVL 393
Query: 470 EGEHYSCMIDLLGRAGKLTDA 490
S ++D+ + G L A
Sbjct: 394 NCHLISSLVDMYAKCGSLEKA 414
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 4/249 (1%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQPDLVLWNTMISGYSQ 310
+ HA ++++G + S L A S D + +F++IPQP+L WNT+I Y+
Sbjct: 43 EVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYAS 102
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRI 369
+ + L++ P+ +F VI A S L S +G +H + IK+ + +
Sbjct: 103 SSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMD-L 161
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+ N+LV Y CG+L A RLF + + VS NSMI+ +AQ +AL LF M
Sbjct: 162 YILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERE 221
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
N+ P ++T V VLSACA + G+ S ++ G + + + M+D+ + G + D
Sbjct: 222 NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK-GIKVDLTLCNAMLDMYTKCGSVDD 280
Query: 490 AERLIEAMP 498
A++L + MP
Sbjct: 281 AQKLFDEMP 289
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 29/325 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C + DL G+ + + + + L N + +Y+KCG + A F++
Sbjct: 229 TMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEM 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+VFS+ ++L YA+ +AR +F+ +P ++ ++N LISAY G + AL++F
Sbjct: 289 PERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFN 348
Query: 121 DMR-EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+++ K D TL ++A + + L +H G + +SL+ Y++
Sbjct: 349 ELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKC 408
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L++A VFY + E +D W++M+ G H G A+ LF EM ++ + T ++
Sbjct: 409 GSLEKALEVFYSVEE-RDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNV 467
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSG---FHQNSHI---------GSGLIDLYAKCSGDMRD 285
L A + HA L+ G FH+ + + ++D+ + +G + +
Sbjct: 468 LCACS-----------HAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGR-AGFLEE 515
Query: 286 CMKVFEEIP-QPDLVLWNTMISGYS 309
M++ E+ P +W ++ S
Sbjct: 516 AMELINEMSTTPSASVWGALLGACS 540
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 36/213 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C + G +H + + + +L + + +Y+KCG L A F
Sbjct: 362 TLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSV 421
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ +V+ ++ ++A R +A LF ++ + P+ V++ ++ A + G +
Sbjct: 422 EERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGR 481
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F +M + G++ + C++ L R
Sbjct: 482 VFFHEME---------PVYGVVPEMKHYACMVDIL-----------------------GR 509
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
GFL+EA + EM W +++ A H
Sbjct: 510 AGFLEEAMELINEMSTTPSASVWGALLGACSLH 542
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/783 (31%), Positives = 385/783 (49%), Gaps = 110/783 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C G+ D+ GKS+H + +K + ++ N I LY KCG L A F++
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ------PDLVSY--------------- 99
N+ S+N L+ ++ A + F + + PD+ +
Sbjct: 272 PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331
Query: 100 --------------------NTLISAYADCGDTESALSLFKD------------------ 121
N LI Y+ CG A LF+
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391
Query: 122 ---------------MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYA 164
M E+ + + T+ L+ A + L ++ LH ++ F +
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
+NN+ + Y++ G L A+ VF+ M K SWN+++ + Q+ + ++AL + EM
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGM-NTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L + D +++ S+L A L L G + H ++++G NS + L+ LY CS
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
FE + + V WN M+SGYSQ E ++AL F+++ G PD+ + ++ AC
Sbjct: 571 G-RTYFETMGDKNSVCWNAMLSGYSQN-ELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S LS LGK++H +K + + V +L+ MY+K G L ++R+F+R+ S
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNF-VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASW 687
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N MI G+ HG G +A+ LFE M ++ P TF+ VL AC H G V+EG Y + M+
Sbjct: 688 NVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQT 747
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
++ EPE EHY+C+ID+LGRAG+L +A I MP P + +
Sbjct: 748 LYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGE 807
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
K A L LE + A Y++L+N+YA +GKW+ V +R+ M+D +QK G SWIE++ ++
Sbjct: 808 KFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKV 867
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
+ F+A + S+P EI + +++ + GY PD K K L HSEK+A
Sbjct: 868 YSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVA 927
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+ FG L+T G + + KNLRIC DCHNA K+IS A REI +RD RFH FK G CSCG
Sbjct: 928 ICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCG 987
Query: 675 DYW 677
DYW
Sbjct: 988 DYW 990
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 221/460 (48%), Gaps = 42/460 (9%)
Query: 5 VLKTCVGRRDLVTGKSL-HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L+ C +++ G+ L L + + L+ I +YS CG + F++ +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+F +N L++ Y R +L+D+ ++ LIS
Sbjct: 173 NLFQWNALVSGYVRN-------ELYDEAIH----TFLELISV------------------ 203
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F D FT LI A + ++ L K +H +A+ G V N+++ Y + GFLD
Sbjct: 204 -TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLD 262
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLASILT 239
EA +F +M E ++ +SWNS++ + ++ LEA + F+ ++ GL D+ T+ ++L
Sbjct: 263 EAVELFDKMPE-QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ ++ G+ H +K G + + LID+Y+KC G + + +F +I +V
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC-GCLSEAAILFRKIENKSVV 380
Query: 300 LWNTMISGYSQKEEYSDQALGCFKK--LNRVGYHPDDCSFVCVISACSNLSPSLG-KQIH 356
WN+MI YS +E + + +K + ++ + + ++ AC S L + +H
Sbjct: 381 SWNSMIGAYS-REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 439
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+++ + + +NNA +A Y+KCG+L A +F M + S N++I G+AQ+G
Sbjct: 440 GYSLRHSFQYKEL-INNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
++AL + M I P + + VS+L AC G + G++
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 135/244 (55%), Gaps = 8/244 (3%)
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+ S F + + + LI +Y+ C + + VF+ + +L WN ++SGY + E Y D+
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRL-VFDRLLNKNLFQWNALVSGYVRNELY-DE 192
Query: 318 ALGCFKKLNRVG-YHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
A+ F +L V + PD+ +F C+I AC+ LGK +H + +K+ + + + V NA+
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMD-LFVGNAM 251
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET--NIPP 433
+A+Y KCG L++A LFD+MPE N +S NS+I G++++G +EA R F +LE+ + P
Sbjct: 252 IALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP 311
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
T V++L C+ G V G M + G E + +ID+ + G L++A L
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKL-GLVHELMVCNALIDMYSKCGCLSEAAIL 370
Query: 494 IEAM 497
+
Sbjct: 371 FRKI 374
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF-E 424
S +N L+ MYS CG ++R +FDR+ N N++++GY ++ + EA+ F E
Sbjct: 140 SGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLE 199
Query: 425 WMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKY-FSMMKDMFGFEPEGEHYSCMI 478
+ T P N TF ++ AC H GK G ++ D+F + MI
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLF-------VGNAMI 252
Query: 479 DLLGRAGKLTDAERLIEAMP 498
L G+ G L +A L + MP
Sbjct: 253 ALYGKCGFLDEAVELFDKMP 272
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/706 (35%), Positives = 374/706 (52%), Gaps = 68/706 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G DL G+ +H ++ + N I +Y KCG
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCG------------ 244
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I SAR +FD++P+ D +S+N +IS Y + L LF
Sbjct: 245 -------------------DIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF 285
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE D D T++ +I+A + L +++H I GF SVNNSL+ +S G
Sbjct: 286 MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVG 345
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
DEA+ VF +M E KD VSW +M+ Y ++ +A++ + M + D T+AS+L
Sbjct: 346 CWDEAEMVFSKM-EFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G+ H ++G + + LID+Y+KC + ++VF IP ++
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC-IDKALEVFHRIPNKNV 463
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+ W ++I G S +AL F+++ + P+ + V V+SAC+ + S GK+IHA
Sbjct: 464 ISWTSIILGLRLNYR-SFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHA 521
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NAL+ MY +CG +E A F+ E + S N ++ GYAQ G G
Sbjct: 522 HALRTGLGFDGF-LPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGG 579
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ LF M+E+++ P ITF S+L AC+ +G V +G +YF M+ F P +HY+ +
Sbjct: 580 LAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV 639
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGRAG+L DA I+ MP +P + AA H +++ +
Sbjct: 640 VDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSV 699
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA SGKW+EVA +R++MR+ + PG SW+EV Q+H F+ D HP IK
Sbjct: 700 GYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIK 759
Query: 581 EIHNYLEEMSRKMKQAGYVPDKEKR-----------LVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ LE KM+ G K+ R HSE+LA+AFGL++T G PI
Sbjct: 760 EINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIW 819
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KNL +C +CHN +KFIS + R I+VRDT +FH FKDG CSCGD
Sbjct: 820 VTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 179/363 (49%), Gaps = 17/363 (4%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ-------LH 152
N+LI GD E AL M+E + + T L+ LC K+ +H
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALL-----RLCEWKRAASEGSRVH 117
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
+ N+LL+ + R G L EA VF +M E +D SWN +V Y +
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAE-RDLFSWNVLVGGYAKAGYF 176
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L+ M+ + + D+YT +L L DL G + H H+I+ GF + + + L
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
I +Y KC GD+ VF+ +P+ D + WN MISGY + + + L F + P
Sbjct: 237 ITMYVKC-GDIFSARLVFDRMPRRDRISWNAMISGYFEN-DVCLEGLRLFFMMREFFVDP 294
Query: 333 DDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D + VISAC L LG+++H IK + +SVNN+L+ M+S G ++A +
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVA-EVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F +M + VS +MI+GY ++G+ +A+ + M + P IT SVLSACA G +
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 452 AEG 454
+G
Sbjct: 414 DKG 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 336 SFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+++ ++ C + S G ++H+ K R + + NAL++M+ + G+L +A +F +
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLG-VRLGNALLSMFVRFGDLVEAWYVFGK 154
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
M E + S N ++ GYA+ G EAL L+ ML I P TF VL C +A G
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 455 QK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
++ + +++ +GFE + + + +I + + G + A + + MP
Sbjct: 215 REVHLHVIR--YGFESDVDVVNALITMYVKCGDIFSARLVFDRMP 257
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/673 (35%), Positives = 365/673 (54%), Gaps = 65/673 (9%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
++ N L+ YAR R+ A+ LF DLVS+NT+IS+ + E AL M
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNGFLD 181
DG TL+ ++ A S L + +++HC A+ G + V +L+ Y
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587
Query: 182 EAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVS-LQLGLDMYTLASILT 239
+ + VF G ++ V+ WN+++ Y ++ +AL+LF EM+S + + T AS+L
Sbjct: 588 KGRLVFD--GVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLP 645
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + H +++K GF ++ ++ + L+D+Y++ G + +F + + D+V
Sbjct: 646 ACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRM-GRVEISKTIFGRMNKRDIV 704
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNR------------------VGYHPDDCSFVCVI 341
WNTMI+G Y D AL ++ R V + P+ + + V+
Sbjct: 705 SWNTMITGCIVCGRY-DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVL 763
Query: 342 SACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
C+ L+ GK+IHA +K ++ + ++V +ALV MY+KCG L A R+FD+MP N
Sbjct: 764 PGCAALAALGKGKEIHAYAVKQKLAMD-VAVGSALVDMYAKCGCLNLASRVFDQMPIRNV 822
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETN------IPPTNITFVSVLSACAHTGKVAEG 454
++ N +I Y HG G EAL LF M I P +T++++ +AC+H+G V EG
Sbjct: 823 ITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEG 882
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI---------- 504
F MK G EP G+HY+C++DLLGR+G++ +A LI MP N +
Sbjct: 883 LHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGAC 942
Query: 505 --------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
AA H LEP+ A YV+++NIY+++G W++ +R+ M++ GV+K+PG
Sbjct: 943 RIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPG 1002
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEK 604
SWIE ++H F++ D SHP KE+H YLE +S++M++ GYVPD KE
Sbjct: 1003 CSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKET 1062
Query: 605 RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L HSE+LA+AFGLL+T G I V KNLR+C DCH A K IS I REI +RD RFH
Sbjct: 1063 MLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFH 1122
Query: 665 CFKDGRCSCGDYW 677
F +G CSCGDYW
Sbjct: 1123 HFANGTCSCGDYW 1135
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 268/577 (46%), Gaps = 83/577 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK--NLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
F VLK DL GK +HA K + P S ++N + +Y KCG L+AA
Sbjct: 332 AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAA----- 386
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
RQ+FD IP D VS+N++I+ + E +L L
Sbjct: 387 --------------------------RQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 119 FKDMREKRFDTDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F+ M + D FTL + A S+ + L KQ+H + G D NN+L+T Y+
Sbjct: 421 FRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYA 479
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
R G +++AK +F + + KD VSWN+++ + Q+ EAL M+ + D TLA
Sbjct: 480 RLGRVNDAKALF-GVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLA 538
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A + LE L G + H + +++G +NS +G+ L+D+Y C + + VF+ +
Sbjct: 539 SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL-VFDGVV 597
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCF-KKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
+ + +WN +++GY+ + E+ DQAL F + ++ + P+ +F V+ AC K
Sbjct: 598 RRTVAVWNALLAGYA-RNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDK 656
Query: 354 Q-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH +K ++ V NAL+ MYS+ G +E ++ +F RM + + VS N+MI G
Sbjct: 657 EGIHGYIVKRGFGKDKY-VQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIV 715
Query: 413 HGIGMEALRLFEWML----------------ETNIP--PTNITFVSVLSACAHTGKVAEG 454
G +AL L M + +P P ++T ++VL CA + +G
Sbjct: 716 CGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKG 775
Query: 455 QKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFL 513
++ + +K + S ++D+ + G L A R+ + MP
Sbjct: 776 KEIHAYAVKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPIR------------- 820
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
N + + +L Y GK EE + R+M G
Sbjct: 821 -----NVITWNVLIMAYGMHGKGEEALELFRIMTAGG 852
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 8/247 (3%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SG 271
+A+ + M++ D + ++L A ++ DL G Q HAH+ K G S + +
Sbjct: 313 DAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANS 372
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+++Y KC GD+ +VF++IP D V WN+MI+ + EE+ + +L F+ +
Sbjct: 373 LVNMYGKC-GDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEW-ELSLHLFRLMLSENVD 430
Query: 332 PDDCSFVCVISACSNLSPS--LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P + V V ACS++ LGKQ+HA T++ R NNALV MY++ G + DA+
Sbjct: 431 PTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG--DLRTYTNNALVTMYARLGRVNDAK 488
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
LF + VS N++I+ +Q+ EAL M+ + P +T SVL AC+
Sbjct: 489 ALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLE 548
Query: 450 KVAEGQK 456
++ G++
Sbjct: 549 RLRIGRE 555
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W ++ + + D A+ + + PD+ +F V+ A + + LGKQIHA
Sbjct: 298 WIDLLRSQTHSSSFRD-AISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHV 356
Query: 360 IKI-EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
K + ++V N+LV MY KCG+L AR++FD +P+ + VS NSMIA +
Sbjct: 357 FKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWEL 416
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHT-GKVAEGQK---YFSMMKDMFGFEPEGEHY 474
+L LF ML N+ PT+ T VSV AC+H G V G++ Y D+ +
Sbjct: 417 SLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYT-----N 471
Query: 475 SCMIDLLGRAGKLTDAERL 493
+ ++ + R G++ DA+ L
Sbjct: 472 NALVTMYARLGRVNDAKAL 490
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +HA +K + + + + +Y+KCGCL+ A F+Q
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----------DQIPQPDLVSYNTLISAYADCG 110
NV ++NVL+ AY + A +LF ++ +P+ V+Y + +A + G
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 111 DTESALSLFKDMR 123
+ L LF M+
Sbjct: 878 MVDEGLHLFHTMK 890
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 240/651 (36%), Positives = 365/651 (56%), Gaps = 51/651 (7%)
Query: 71 LLAAYARQLRIASARQLFDQ--------IPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
L+ Y++ + SAR LFD P+ NT++ AYA+ G + A+ L+ M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + FT ++ ++ L + + +H + GF V +L+ Y++ G +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A VF M I+D V W +M+ Y Q L+AL LF++M D T S+ +A
Sbjct: 184 GDAHEVFDRM-LIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L D + H + + +GF + +G+ ++ +YAKC G++ VF+ + + + +
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKC-GNVERARLVFDRMEERNGIS 301
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WN+M+SGY+Q +D AL F ++ P+ + + ++SACS L S LG+++H
Sbjct: 302 WNSMLSGYTQNGRPTD-ALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV 360
Query: 360 I--KIEIRSNRISVNNALVAMYSKCGNLEDARRLFD--RMPEHNTVSLNSMIAGYAQHGI 415
I K++I + ++ NA++ MY KCG+L+ A +F+ + E + S N +I+GY HG
Sbjct: 361 ISSKMDIDT---TLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGH 417
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EAL LF M + P +ITF S+LSAC+H G + EG+K F+ M + PE +HY+
Sbjct: 418 GKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYA 476
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP-----GSIALK------------AANHFLQLEPS 518
CM+D+LGRAG L +A RLI+ +P P G++ L AAN+ QLEP
Sbjct: 477 CMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPE 536
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ YV+++NIYAAS KW+EV +R+ M+ RG++K FS IE ++H F D S P
Sbjct: 537 HTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPY 596
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+E++ +E ++ +MK GYVPD KE L +HSEKLAVAFG++ G
Sbjct: 597 YREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGM 656
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI V KNLR+C DCH A KFIS+I GR+I VRD RFH F+ GRCSCGDYW
Sbjct: 657 PIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 7/242 (2%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N ++ YA+ + AR +FD++ + + +S+N+++S Y G ALSLF M+ D
Sbjct: 272 NSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD 331
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T +++A S + L ++LH I D ++ N+++ Y + G LD A +
Sbjct: 332 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 391
Query: 187 FY--EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F E+GE +D SWN ++ YG H G EAL+LF M + + T SIL+A +
Sbjct: 392 FNNCELGE-RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHA 450
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNT 303
+ G + A + K + ++D+ + +G + + ++ ++IP +P +W
Sbjct: 451 GLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGR-AGFLNEAFRLIKKIPSRPSDEVWGA 509
Query: 304 MI 305
++
Sbjct: 510 LL 511
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 350/646 (54%), Gaps = 78/646 (12%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AYA +ASAR++FD+IP+ +++ N +I +Y + G + +F M D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S + + +++H A G V N L++ Y + GFL EA+ V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLED 246
EM +D VSWNS+VV Y Q++ +AL++ +EM S+++ D T+AS+L A T+ E+
Sbjct: 200 EMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ +Y K DM F ++ + LV WN MI
Sbjct: 259 V---------------------------MYVK---DM------FFKMGKKSLVSWNVMIG 282
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y K +A+ + ++ G+ PD S V+ AC + S SLGK+IH + ++
Sbjct: 283 VY-MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + NAL+ MY+KCG LE AR +F+ M + VS +MI+ Y G G +A+ LF
Sbjct: 342 PNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
+ ++ + P +I FV+ L+AC+H G + EG+ F +M D + P EH +CM+DLLGRAG
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
K+ +A R I+ M P I L AA+ QL P + YV+L+N
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G+WEEV IR +M+ +G++K PG S +EV + +H F+ D SHP EI+ L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE-----PILVM 631
+ +KMK+ GYVP DKE L HSEKLA+ F L++T E I +
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLRICGDCH A K IS I REI +RDT RFH F+ G CSCGDYW
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
++ L +L + + L H+ +I NS +G L+ YA D+ KVF
Sbjct: 42 VFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLK-DVASARKVF 97
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSP 349
+EIP+ ++++ N MI Y Y + + F + PD +F CV+ ACS + +
Sbjct: 98 DEIPERNVIIINVMIRSYVNNGFYG-EGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G++IH K+ + S+ + V N LV+MY KCG L +AR + D M + VS NS++ G
Sbjct: 157 VIGRKIHGSATKVGL-SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YAQ+ +AL + M I T S+L A ++T E Y +KDMF F+
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMY---VKDMF-FKM 269
Query: 470 EGE---HYSCMIDLLGRAGKLTDAERL---IEAMPFNPGSIALKAA------NHFLQL-- 515
+ ++ MI + + +A L +EA F P ++++ + L L
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 516 ------EPSNAVPYVMLAN----IYAASGKWEEVATIRRLMRDRGV 551
E +P ++L N +YA G E+ + M+ R V
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 40/279 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C +V G+ +H K + + ++ N + +Y KCG LS A ++
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N L+ YA+ R A
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--S 141
+ +F ++ + LVS+N +I Y A+ L+ M F+ D +++ ++ A
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L L K++H + N+L+ Y++ G L++A+ VF M +D VSW +
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVVSWTA 380
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
M+ AYG G +A+ LF ++ L D + L A
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 42/229 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL C L GK +H + K L+P + L N I +Y+KCGCL A F
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESA 115
+ +V S+ +++AY R A LF ++ PD +++ T ++A + G E
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
S FK M TD + ++ ++ L C+ G
Sbjct: 430 RSCFKLM------TDHYKITP----------RLEHLACMVDLLG---------------- 457
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG----LEALQLFQ 220
R G + EA R +M +E W +++ A H + L A +LFQ
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 258/756 (34%), Positives = 388/756 (51%), Gaps = 110/756 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G S+HA+ + ++ ++ N + +Y +CG A F++
Sbjct: 147 TFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEM 206
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ V DLVS+N++++AY GD+ A+ +F+
Sbjct: 207 RERGV----------------------------GDLVSWNSIVAAYMQGGDSIRAMKMFE 238
Query: 121 DMREK-RFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E D +L ++ AS KQ+H A+ G V N+++ Y++
Sbjct: 239 RMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKC 298
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-------------HRE------------- 211
G ++EA +VF M ++KD VSWN+MV Y Q RE
Sbjct: 299 GMMEEANKVFERM-KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAV 357
Query: 212 ---------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
G EAL +F++M+ ++ TL S+L+ S L+ G + H H IK
Sbjct: 358 IAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWIL 417
Query: 263 HQNSH-------IGSGLIDLYAKCSGDMRDCMKVFEEIPQPD--LVLWNTMISGYSQKEE 313
+ + + + + LID+Y+KC + +F+ IP D +V W +I G +Q E
Sbjct: 418 NLDENDPGDDLMVINALIDMYSKCKSP-KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 476
Query: 314 YSDQALGCFKKLNRVG--YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+++AL F ++ + P+ + C + AC+ L G+QIHA ++ S +
Sbjct: 477 -ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLF 535
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N L+ MYSK G+++ AR +FD M + N VS S++ GY HG G EAL++F M +
Sbjct: 536 VANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVX 595
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P +TFV VL AC+H+G V +G YF+ M FG P EHY+CM+DLL RAG+L +A
Sbjct: 596 LVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEA 655
Query: 491 ERLIEAMPFNPGS---IAL--------------KAANHFLQLEPSNAVPYVMLANIYAAS 533
LI MP P +AL AAN L+LE N Y +L+NIYA +
Sbjct: 656 MELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANA 715
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
W++VA IR LM++ G++K+PG SW++ +K F A D SHPM ++I++ L ++ +++
Sbjct: 716 RCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRI 775
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K GYVPD K L HSEKLA+A+G+L+T+ G PI + KNLR CGDCH
Sbjct: 776 KALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCH 835
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+A +IS I EI VRD+ RFH FK+G CSC YW
Sbjct: 836 SAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 151/301 (50%), Gaps = 44/301 (14%)
Query: 197 VSWNSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
V W + ++ H LE LQL++ M L D YT +L A + G HA
Sbjct: 110 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 169
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ---PDLVLWNTMISGYSQKE 312
+ SGF N +G+GL+ +Y +C G + +VF+E+ + DLV WN++++ Y Q
Sbjct: 170 VVFASGFEWNVFVGNGLVSMYGRC-GAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 228
Query: 313 EYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+ S +A+ F+++ +G PD S V V+ AC+++ S GKQ+H ++ + + +
Sbjct: 229 D-SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFED-VF 286
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM------------------------ 406
V NA+V MY+KCG +E+A ++F+RM + VS N+M
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 407 -----------IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
IAGYAQ G+G EAL +F ML P +T VS+LS CA G + G+
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406
Query: 456 K 456
+
Sbjct: 407 E 407
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 18/268 (6%)
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
T F + L H L+ G H +HI I +Y + + + P
Sbjct: 53 TLFHQCKSLASAELTHQQLLVQGLPHDPTHI----ISMYLTFNSPAKALSVLRRLHPSSH 108
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQI 355
V W + S + + L ++++ R+G+ PD +F V+ AC + PS G +
Sbjct: 109 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEI-PSFRCGASV 167
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH---NTVSLNSMIAGYAQ 412
HA+ N + V N LV+MY +CG E+AR++FD M E + VS NS++A Y Q
Sbjct: 168 HAVVFASGFEWN-VFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 413 HGIGMEALRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEP 469
G + A+++FE M E I P ++ V+VL ACA G + G++ +++ +F
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + ++D+ + G + +A ++ E M
Sbjct: 287 VG---NAVVDMYAKCGMMEEANKVFERM 311
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 363/648 (56%), Gaps = 40/648 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF N L+ YA+ + A+ +F+ + D+VS+NTL++ AL LF +
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHES 293
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R T + +I +N L L +QLH + GF +V +L YS+ G L
Sbjct: 294 RATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGEL 353
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A +F ++ VSW +++ Q+ + A+ LF M ++ + +T +++L A
Sbjct: 354 ADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+ Q HA +IK+ + +G+ L+ Y+K G D + +F+ I Q D+V
Sbjct: 414 SLSILPP----QIHAQVIKTNYQHIPFVGTALLASYSK-FGSTEDALSIFKMIEQKDVVA 468
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHAL 358
W+ M+S ++Q + + A F K+ G P++ + VI AC+ S + G+Q HA+
Sbjct: 469 WSAMLSCHAQAGD-CEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+IK + I V++ALV+MYS+ GN++ A+ +F+R + + VS NSMI+GYAQHG M+
Sbjct: 528 SIKYRYH-DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMK 586
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A+ F M + I +TF++V+ C H G V EGQ+YF M P EHY+CM+
Sbjct: 587 AIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAV 521
DL RAGKL + LI MPF G++ + +A+ L LEP ++
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSS 706
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+NIYAA+GKW+E +R+LM R V+K+ G SWI++K ++H F+A D SHPM +
Sbjct: 707 TYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQ 766
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I+ L+ + ++KQ GY P+ KE LV HSE+LA+AFGL++T G P+
Sbjct: 767 IYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQ 826
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KNLR+CGDCH +K +S I REI +RD RFH F G CSCGD+W
Sbjct: 827 IVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 228/498 (45%), Gaps = 40/498 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C D V G+ LH C C+ H
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLH------------------------CLCVKCGH------ 130
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
V + L+ Y + + ++F+ +P+ ++V++ +L++ A ++LF
Sbjct: 131 DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFF 190
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + + FT + +++ AS L L +++H ++ G V NSL+ Y++ G
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++AK VF M E +D VSWN+++ + LEALQLF E + + T A+++
Sbjct: 251 LVEDAKSVFNWM-ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVI 309
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIPQPD 297
+L+ L Q H+ ++K GFH ++ + L D Y+KC G++ D + +F +
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC-GELADALNIFSMTTGSRN 368
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
+V W +ISG Q + A+ F ++ P++ ++ ++ A ++ P QIHA
Sbjct: 369 VVSWTAIISGCIQNGDIP-LAVVLFSRMREDRVMPNEFTYSAMLKASLSILP---PQIHA 424
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK + V AL+A YSK G+ EDA +F + + + V+ ++M++ +AQ G
Sbjct: 425 QVIKTNYQHIPF-VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A LF M I P T SV+ ACA + + F + + + S +
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSAL 543
Query: 478 IDLLGRAGKLTDAERLIE 495
+ + R G + A+ + E
Sbjct: 544 VSMYSRKGNIDSAQIVFE 561
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 84 ARQLFDQIPQPDL-VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA-- 140
AR D+IP+ D V N ++ YA G L F R D TLS ++ A
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 141 SSNNLCLIKQLHCLAIYCGFDH-YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
S + L +QLHCL + CG D S SL+ Y + G + E VF M + K+ V+W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK-KNVVTW 169
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
S++ + E + LF M + + + +T AS+L+A S L G + HA +K
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
G + + + L+++YAKC G + D VF + D+V WNT+++G Q E +AL
Sbjct: 230 FGCRSSVFVCNSLMNMYAKC-GLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEAL 287
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK--IEIRSNRISVNNALV 376
F + ++ VI C+NL +L +Q+H+ +K + N V AL
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGN---VMTALA 344
Query: 377 AMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
YSKCG L DA +F N VS ++I+G Q+G A+ LF M E + P
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404
Query: 436 ITFVSVLSA 444
T+ ++L A
Sbjct: 405 FTYSAMLKA 413
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 290 FEEIPQPDLVLW-NTMISGYSQKE---EYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+EIP+ D + N ++ Y+++ E DQ F R G D + CV+ AC
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQ----FSVARRGGVLVDSATLSCVLKACR 110
Query: 346 NLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
++ LG+Q+H L +K +S +LV MY KCG++ + +F+ MP+ N V+
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
S++ G A + E + LF M I P TF SVLSA A G + GQ+ +
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK- 229
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FG + ++++ + G + DA+ + M
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 23 ALYLKNLVPFSAYLSNHFIL--LYSKCGCLSAA------HHAFN--QTQHANVFSFNVLL 72
A YL N + N F + + C C SA HA + H + + L+
Sbjct: 485 ATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALV 544
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
+ Y+R+ I SA+ +F++ DLVS+N++IS YA G + A+ F+ M DG
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 133 TLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
T +I ++N +++ I +HYA ++ YSR G LDE
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA----CMVDLYSRAGKLDETMS 660
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHR 210
+ +M + W +++ A H+
Sbjct: 661 LIRDMPFPAGAMVWRTLLGACRVHK 685
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/649 (36%), Positives = 364/649 (56%), Gaps = 41/649 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ AY +A A+Q+F P ++VS+ LIS A A+ +F++M
Sbjct: 55 NTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMI 114
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
F + T+S ++ A +N L LI K +HC + GF+ V +L+ YS+ G +
Sbjct: 115 MGNFKPNAVTISSVLPAFAN-LGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCM 173
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+++F M E ++ V+WN++V Y H EA+ LF M L +D YT+ S++ A
Sbjct: 174 GVARQLFESMSE-RNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPA 232
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+ L G H +I++G+ + HI + L+D+Y + + D +VF E+ D+
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC-VDDAHRVFSEMSVKDVAA 291
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSL--GKQIHA 357
W M++G+S + D+A+ F K+ + D + + ++S+CS+ S +L G+++HA
Sbjct: 292 WTLMLTGFSSGRHW-DRAIKHFNKMLGIQNLKLDSIALMGILSSCSH-SGALQQGRRVHA 349
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK +N I V +A++ MY+ CGNLEDA+R F M E + V N+MIAG +G G
Sbjct: 350 LAIKTCF-ANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGT 408
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A+ LF M + + P TFVSVL AC+H G V EG + F M P +HY+C+
Sbjct: 409 DAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACV 468
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNA 520
ID+LGRAG+L A I MPF P G+I L + + ++EP++A
Sbjct: 469 IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDA 528
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YA +G WE V R +R + ++K PGFS IE+ ++++ F+A + HP
Sbjct: 529 GYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYF 588
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I L+ + K+K+AGYVP+ K+ L HHSEK+A+AFGL+ T I
Sbjct: 589 KIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETII 648
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR C DCH A KF+S + GR + ++D RFH F+DG CSC DYW
Sbjct: 649 RITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
ASIL L+DL Q HA +I SG N+ + + L++ Y C G + D ++F P
Sbjct: 28 ASILR---KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYC-GLLADAKQIFHHTP 83
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGK 353
++V W +ISG ++ + + +A+ F+++ + P+ + V+ A +NL + K
Sbjct: 84 YKNVVSWTILISGLAKNDCFV-EAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+H ++ N + V ALV MYSK G + AR+LF+ M E N V+ N++++GY+ H
Sbjct: 143 SVHCFWVRGGFEGN-VFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDH 201
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG--KVAEGQKYFSMMKDMFGFEPEG 471
G EA+ LF M + T +S++ A G +V G F + G+E +
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT---GYENDK 258
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ + DA R+ M
Sbjct: 259 HIKTALMDIYVSHNCVDDAHRVFSEM 284
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 317/540 (58%), Gaps = 39/540 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y + L++A ++F +M + ++ +SW +M+ AY + + +AL+L M+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
++YT +S+L + + D+ H +IK G + + S LID++AK G+ D +
Sbjct: 159 RPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL-GEPEDAL 214
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+E+ D ++WN++I G++Q SD AL FK++ R G+ + + V+ AC+ L
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LG Q H +K + + +NNALV MY KCG+LEDA R+F++M E + ++ ++M
Sbjct: 274 ALLELGMQAHVHIVKYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G AQ+G EAL+LFE M + P IT V VL AC+H G + +G YF MK ++G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AA 509
+P EHY CMIDLLG+AGKL DA +L+ M P ++ + AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ L+P +A Y +L+NIYA S KW+ V IR MRDRG++K+PG SWIEV KQ+H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAF 617
+ D SHP I E+ L ++ ++ GYVP+ E L HHSEKLA+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL++ + I + KNLRICGDCH K S + R I +R R+H F+DG+CSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 190/364 (52%), Gaps = 9/364 (2%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L H FN +F NVL+ Y + + A QLFDQ+PQ +++S+ T+ISAY+
Sbjct: 80 GNLICRHLYFN-GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
C + AL L M + +T S ++ S N + ++ LHC I G + V
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCNGMSDVRMLHCGIIKEGLESDVFVR 197
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ +++ G ++A VF EM D + WNS++ + Q+ AL+LF+ M
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ TL S+L A T L L G+Q H H++K + Q+ + + L+D+Y KC G + D +
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC-GSLEDAL 313
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++ + D++ W+TMISG +Q YS +AL F+++ G P+ + V V+ ACS+
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 348 SPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNS 405
+ ++K + + + ++ + K G L+DA +L + M E + V+ +
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 406 MIAG 409
++
Sbjct: 433 LLGA 436
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 48/234 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G H +K L+N + +Y KCG L A FNQ
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V ++++T+IS A G ++ AL LF+
Sbjct: 320 KERDV-------------------------------ITWSTMISGLAQNGYSQEALKLFE 348
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL---------IKQLHCLAIYCGFDHYASVNNSLL 171
M+ + T+ G++ A S+ L +K+L+ G D ++
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY------GIDPVREHYGCMI 402
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ G LD+A ++ EM D V+W +++ A R + A +++++L
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/710 (34%), Positives = 378/710 (53%), Gaps = 70/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLKTC G D+ GK +HA ++ + N I +Y KCG
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCG------------ 247
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I++AR LFD++P+ D +S+N +IS Y + G L LF
Sbjct: 248 -------------------DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS 288
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE D D T++ + +A +N L + +H + F S+NNSL+ YS G
Sbjct: 289 MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+EA+ VF M E KD VSW +M+ + H+ +A++ ++ M + D TL S+L
Sbjct: 349 RLEEAETVFSRM-ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVL 407
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + L G++ H IK+G + + + LID+Y+KC + + ++VF I ++
Sbjct: 408 SACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKC-VDNALEVFRNISGKNV 466
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
V W ++I G + S +AL F+++ + P+ + + V+SAC+ + + GK+IHA
Sbjct: 467 VSWTSLILGL-RINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHA 524
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NA++ MY +CG A F+ + + + N ++ GYAQ G
Sbjct: 525 HALRTGVGFDGF-LPNAILDMYVRCGRKVPALNQFNSQKK-DVTAWNILLTGYAQQGQAK 582
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ LF+ MLE I P ITF+S+L AC+ +G V EG +YF++MK+ + P +HY+C+
Sbjct: 583 LAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACV 642
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+D+LGRAG+L DA I+ MP P + + AA + + +
Sbjct: 643 VDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSV 702
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA G W++V+ +R LMR+RG+ PG SW+E+K ++H F++ D SH K
Sbjct: 703 GYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSK 762
Query: 581 EIHNYLEEMSRKMKQAGY-----------VPDKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ L+ KMK+ G+ + HSE+ A+AFGL++T+ G PI
Sbjct: 763 EINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIW 822
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD--YW 677
V KNL +C CHN +KFIS I REI+VRD +H FKDG CSCGD YW
Sbjct: 823 VTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 227/427 (53%), Gaps = 13/427 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL+ + R + A +F ++ + D+ S+N L+ YA G + AL+L+ M
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ +T ++ A +++ K++H I GF+ V N+L+T Y + G + A+ +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M + +D +SWN+M+ Y ++ GLE L+LF M L + D+ T+ ++ +A L++
Sbjct: 256 FDKMPK-RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G H +++KS F + + + LI +Y+ G + + VF + D+V W MI+
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSL-GRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 307 G-YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
S K + +A+ +K + G PD+ + V V+SAC+ + LG ++H + IK +
Sbjct: 374 SLVSHKLPF--KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ I V+N+L+ MYSKC +++A +F + N VS S+I G + EAL F
Sbjct: 432 VSHVI-VSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFR 490
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGR 483
M E+ + P ++T +SVLSACA G + G++ + ++ GF +G + ++D+ R
Sbjct: 491 QMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGF--DGFLPNAILDMYVR 547
Query: 484 AGKLTDA 490
G+ A
Sbjct: 548 CGRKVPA 554
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 180/345 (52%), Gaps = 22/345 (6%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
+ ++ ++L + +R +G + L+++S + LC+ + N+L
Sbjct: 96 EEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCV-----------------RLGNAL 138
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L+ + R G L +A VF +M E +D SWN +V Y + EAL L+ M+ ++ +
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSE-RDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+YT S+L + D+ G + HAH+I+ GF + +G+ LI +Y KC GD+ + +F
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKC-GDISNARMLF 256
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SP 349
+++P+ D + WN MISGY + + L F + + PD + V SAC L +
Sbjct: 257 DKMPKRDRISWNAMISGYFENGG-GLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG+ +H +K E + IS+NN+L+ MYS G LE+A +F RM + VS +MIA
Sbjct: 316 RLGRGVHGYVVKSEFGGD-ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
H + +A+ ++ M I P IT VSVLSACA G + G
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNR----IS 370
+QA+ + + + ++ +++ ++ C +P G +++ L + S++ +
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYEL-----VSSSKSCLCVR 133
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ NAL++M+ + GNL DA +F +M E + S N ++ GYA+ G EAL L+ ML
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P TF SVL CA +A G++ + + FGFE + + + +I + + G +++A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVI-RFGFESDVDVGNALITMYVKCGDISNA 252
Query: 491 ERLIEAMP 498
L + MP
Sbjct: 253 RMLFDKMP 260
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/710 (34%), Positives = 378/710 (53%), Gaps = 70/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLKTC G D+ GK +HA ++ + N I +Y KCG
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCG------------ 247
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I++AR LFD++P+ D +S+N +IS Y + G L LF
Sbjct: 248 -------------------DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFS 288
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE D D T++ + +A +N L + +H + F S+NNSL+ YS G
Sbjct: 289 MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+EA+ VF M E KD VSW +M+ + H+ +A++ ++ M + D TL S+L
Sbjct: 349 RLEEAETVFSRM-ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVL 407
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + L G++ H IK+G + + + LID+Y+KC + + ++VF I ++
Sbjct: 408 SACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKC-VDNALEVFRNISGKNV 466
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
V W ++I G + S +AL F+++ + P+ + + V+SAC+ + + GK+IHA
Sbjct: 467 VSWTSLILGL-RINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHA 524
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NA++ MY +CG A F+ + + + N ++ GYAQ G
Sbjct: 525 HALRTGVGFDGF-LPNAILDMYVRCGRKVPALNQFNSQKK-DVTAWNILLTGYAQQGQAK 582
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ LF+ MLE I P ITF+S+L AC+ +G V EG +YF++MK+ + P +HY+C+
Sbjct: 583 LAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACV 642
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+D+LGRAG+L DA I+ MP P + + AA + + +
Sbjct: 643 VDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSV 702
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA G W++V+ +R LMR+RG+ PG SW+E+K ++H F++ D SH K
Sbjct: 703 GYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSK 762
Query: 581 EIHNYLEEMSRKMKQAGY-----------VPDKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ L+ KMK+ G+ + HSE+ A+AFGL++T+ G PI
Sbjct: 763 EINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIW 822
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD--YW 677
V KNL +C CHN +KFIS I REI+VRD +H FKDG CSCGD YW
Sbjct: 823 VXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 227/427 (53%), Gaps = 13/427 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL+ + R + A +F ++ + D+ S+N L+ YA G + AL+L+ M
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ +T ++ A +++ K++H I GF+ V N+L+T Y + G + A+ +
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M + +D +SWN+M+ Y ++ GLE L+LF M L + D+ T+ ++ +A L++
Sbjct: 256 FDKMPK-RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G H +++KS F + + + LI +Y+ G + + VF + D+V W MI+
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSL-GRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 307 G-YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
S K + +A+ +K + G PD+ + V V+SAC+ + LG ++H + IK +
Sbjct: 374 SLVSHKLPF--KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ I V+N+L+ MYSKC +++A +F + N VS S+I G + EAL F
Sbjct: 432 VSHVI-VSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFR 490
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGR 483
M E+ + P ++T +SVLSACA G + G++ + ++ GF +G + ++D+ R
Sbjct: 491 QMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGF--DGFLPNAILDMYVR 547
Query: 484 AGKLTDA 490
G+ A
Sbjct: 548 CGRKVPA 554
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 180/345 (52%), Gaps = 22/345 (6%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
+ ++ ++L + +R +G + L+++S + LC+ + N+L
Sbjct: 96 EEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCV-----------------RLGNAL 138
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L+ + R G L +A VF +M E +D SWN +V Y + EAL L+ M+ ++ +
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSE-RDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+YT S+L + D+ G + HAH+I+ GF + +G+ LI +Y KC GD+ + +F
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKC-GDISNARMLF 256
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SP 349
+++P+ D + WN MISGY + + L F + + PD + V SAC L +
Sbjct: 257 DKMPKRDRISWNAMISGYFENGG-GLEGLELFSMMRELSVDPDLITMTTVASACELLDNE 315
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG+ +H +K E + IS+NN+L+ MYS G LE+A +F RM + VS +MIA
Sbjct: 316 RLGRGVHGYVVKSEFGGD-ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
H + +A+ ++ M I P IT VSVLSACA G + G
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNR----IS 370
+QA+ + + + ++ +++ ++ C +P G +++ L + S++ +
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYEL-----VSSSKSCLCVR 133
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ NAL++M+ + GNL DA +F +M E + S N ++ GYA+ G EAL L+ ML
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P TF SVL CA +A G++ + + FGFE + + + +I + + G +++A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVI-RFGFESDVDVGNALITMYVKCGDISNA 252
Query: 491 ERLIEAMP 498
L + MP
Sbjct: 253 RMLFDKMP 260
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/664 (34%), Positives = 359/664 (54%), Gaps = 53/664 (7%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
L A F+Q +V + +++ Y R R+ A LFD++P D+VS+N++IS +C
Sbjct: 51 LDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVEC 110
Query: 110 GDTESALSLFKDMREKRFDT-----DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA 164
GD ++A+ +F +M E+ + +G G++ + C + A
Sbjct: 111 GDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAW-------- 162
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
N+++ Y + G +D+A ++F +M K+ +SW +M+ Q+ EAL LF+ M+
Sbjct: 163 ---NAMVHGYLQFGKVDDALKLFKQMPR-KNVISWTTMICGLDQNERSGEALNLFKNMLR 218
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ T ++TA + G Q H +IKSGF ++ + LI LYA C
Sbjct: 219 CCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCK-RTE 277
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
D KVF E+ + +W ++SGYS ++ D AL F ++ R P+ +F +++C
Sbjct: 278 DSRKVFGEMVHEKVAVWTALLSGYSLNRKHED-ALNVFSEMIRNSILPNQSTFASGLNSC 336
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S L GK+IH + +K+ + + V N+LV MYS GN+ DA +F + + + VS
Sbjct: 337 SALGTLDWGKEIHGVAVKLGLGTVAF-VGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSW 395
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
NS+I G AQHG G A +F M+ N P ITF +LSAC+H G + +G+K F +
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISS 455
Query: 464 MFG-FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL---------------- 506
+ + +HY+CM+D+LGR G+L +AE+LIE+M P +
Sbjct: 456 GLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 507 -KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
KAA L+ ++ YV+L+NIYA++G+W V+ +R M+ +G+ KKPG SW+ ++ +
Sbjct: 516 EKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGK 575
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
H F + D H + I LE + K+K+ GYVPD KE+ L +HSE+L
Sbjct: 576 KHEFFSGDRPHCL--RIFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERL 633
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL++T G + VMKNLR+C DCH IK IS + G +I +RD RFH FK+G CSC
Sbjct: 634 AIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSC 693
Query: 674 GDYW 677
GDYW
Sbjct: 694 GDYW 697
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/654 (35%), Positives = 371/654 (56%), Gaps = 66/654 (10%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ +AR + +AR++F+ + + +V + +I+ Y G A+ LF M E F+ D
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKR 185
G+T+S +++A + + L +QLH L + G V+ L+ Y++ ++ A++
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARK 308
Query: 186 VFYEMGEIKDEVSWNSMVVAY----GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
VF M + +SW +++ Y GQ A++L EM++ + + T +S+L A
Sbjct: 309 VFKRM-PTHNVMSWTALISGYVQCGGQENN---AVELLCEMLNESIEPNHLTYSSLLKAC 364
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+L D G Q HA ++K+ + +G+ L+ +YA+ SG M + K F+++ + +L+
Sbjct: 365 ANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAE-SGCMEEARKAFDQLYERNLLST 423
Query: 302 NTMI-------SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGK 353
++ I + +S + E D + F +F ++SA + + P+ G+
Sbjct: 424 SSDIGETGRSNASWSSQIESMDVGVSTF-------------TFASLLSAAATVGLPTKGQ 470
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAGYAQ 412
Q+HAL+IK S++ ++N+LV+MYS+CG L+DA R FD M + HN +S S+I+ A+
Sbjct: 471 QLHALSIKTGFESDK-GISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAK 529
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG AL LF M+ + + P ++T+++VLSAC+H G V EG++YF M+ P E
Sbjct: 530 HGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRME 589
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQL 515
HY+CM+DLL R+G + +A I MP ++ K AA H + L
Sbjct: 590 HYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDL 649
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
EP + PYV+L+N+YA G W+EVA IR LMR R + K+ G SW+ V +H F A D S
Sbjct: 650 EPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTS 709
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
HP +EI+ L + R++K GYVPD KE+ L+ HSEK+AVAFGL++T
Sbjct: 710 HPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTL 769
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+PI + KNLR+C DCH+AIK+IS GREI +RD+ RFH KDG+CSCG+YW
Sbjct: 770 PTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 216/448 (48%), Gaps = 26/448 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLFKD 121
A+ N LL Y++ + +AR++FD + DLVS+ + G + AL L +
Sbjct: 77 ADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGE 136
Query: 122 MREKRFDTDGFTL--------SGLITASSNNLCLIKQLHCLAIYCGF-DHYASVNNSLLT 172
M E + FTL G + SS L AI GF SV +L+
Sbjct: 137 MLESGLRPNAFTLCAAAHACFPGELFRSSGGTVL-----GFAIKTGFWGTDVSVGCALID 191
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
++RNG L A++VF + E + V W M+ Y Q +A++LF M+ D Y
Sbjct: 192 MFARNGDLVAARKVFNGLVE-RTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGY 250
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVF 290
T++S+++A G Q H+ +++ G ++ + GL+D+Y K + M KVF
Sbjct: 251 TMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVF 310
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-P 349
+ +P +++ W +ISGY Q + A+ ++ P+ ++ ++ AC+NLS
Sbjct: 311 KRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQ 370
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G+QIHA +K I N V NALV+MY++ G +E+AR+ FD++ E N +S +S I
Sbjct: 371 DSGRQIHARVMKTSI-GNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGE 429
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+ + E M ++ + TF S+LSA A G +GQ+ ++ GFE
Sbjct: 430 TGRSNASWSS--QIESM---DVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKT-GFES 483
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + ++ + R G L DA R + M
Sbjct: 484 DKGISNSLVSMYSRCGYLDDACRAFDEM 511
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 171/321 (53%), Gaps = 23/321 (7%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
D A V NSLLT YS+ G + A+RVF M ++D VSW +M ++ EAL L
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134
Query: 220 QEMVSLQLGLDMYTLASILTA------FTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGL 272
EM+ L + +TL + A F S V G IK+GF + +G L
Sbjct: 135 GEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFA-----IKTGFWGTDVSVGCAL 189
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID++A+ +GD+ KVF + + +V+W MI+ Y Q + +A+ F + G+ P
Sbjct: 190 IDMFAR-NGDLVAARKVFNGLVERTVVVWTLMITRYVQG-GCAGKAVELFLGMLEDGFEP 247
Query: 333 DDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC---GNLEDA 388
D + ++SAC+ S LG+Q+H+L +++ + S+ V+ LV MY+K ++E A
Sbjct: 248 DGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSD-TCVSCGLVDMYTKLQMEQSMECA 306
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGME--ALRLFEWMLETNIPPTNITFVSVLSACA 446
R++F RMP HN +S ++I+GY Q G G E A+ L ML +I P ++T+ S+L ACA
Sbjct: 307 RKVFKRMPTHNVMSWTALISGYVQCG-GQENNAVELLCEMLNESIEPNHLTYSSLLKACA 365
Query: 447 HTGKVAEG-QKYFSMMKDMFG 466
+ G Q + +MK G
Sbjct: 366 NLSDQDSGRQIHARVMKTSIG 386
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 48/340 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C D +G+ +HA +K + + N + +Y++ GC+ A AF+Q
Sbjct: 356 TYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT-ESALSLF 119
N L+S +D G+T S S
Sbjct: 416 YERN-------------------------------------LLSTSSDIGETGRSNASWS 438
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ FT + L++A++ K QLH L+I GF+ ++NSL++ YSR
Sbjct: 439 SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRC 498
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G+LD+A R F EM + + +SW S++ A +H AL LF +M+ + + T ++
Sbjct: 499 GYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAV 558
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
L+A + + + G ++ + K + H ++DL A+ SG +++ ++ E+P
Sbjct: 559 LSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYAC-MVDLLAR-SGLVQEALEFINEMPC 616
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+ D ++W T++ Y + +G + + P D
Sbjct: 617 KADALVWKTLLGAC---RTYENIEIGEIAARHVIDLEPQD 653
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 248/716 (34%), Positives = 373/716 (52%), Gaps = 73/716 (10%)
Query: 31 PFSAYLSNHFILLYSKCGCLSAAH----HAFNQTQHANVFSFNVLL--AAYARQLRIASA 84
P+ + + L SKC + H H +F+ + L+ +A +R I+ A
Sbjct: 23 PYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYA 82
Query: 85 RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN- 143
LF+ I +P+L +N++I + AL F M + + +T L+ + +
Sbjct: 83 ISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKL 142
Query: 144 -NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG------------------------ 178
+ KQ+H + GF ++ SL+ Y+++G
Sbjct: 143 ASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALI 202
Query: 179 -------FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++D A+++F EM +KD VSWN+M+ Y Q EAL LF++M + +
Sbjct: 203 AGYALWGYMDRARQLFDEM-PVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNE 261
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ S+L+A L G + + G N + + LID+Y+KC GD++ ++F+
Sbjct: 262 STIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC-GDLQTARELFD 320
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
++ + D++ WN MI GY+ Y +AL F+++ G P + +F+ ++ +C++L
Sbjct: 321 DMLERDVISWNVMIGGYTHMCSYK-EALALFREMLASGVEPTEITFLSILPSCAHLGAID 379
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LGK IHA I S S++ +L+ +Y+KCGN+ AR++FD M + S N+MI G
Sbjct: 380 LGKWIHAY-INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGL 438
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A HG +A LF M I P ITFV +LSAC H G V GQ++FS M + P+
Sbjct: 439 AMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPK 498
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFL 513
+HY CMIDLLGRAG +AE L++ M P G + L A
Sbjct: 499 SQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLF 558
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+LEP N YV+L+NIYA +GKW++VA IR + DRG++K PG + IEV +H F+ D
Sbjct: 559 ELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGD 618
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
HP ++I+ LEE+ ++K G+V D KE L HHSEKLA+AFGL+S
Sbjct: 619 KVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLIS 678
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T G PI ++KNLR+C +CH+A K IS I REI RD RFH FKDG CSC DYW
Sbjct: 679 TKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/673 (35%), Positives = 365/673 (54%), Gaps = 71/673 (10%)
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-TESALSLFKDMREKRFDTDG 131
AA++ + AR++FDQIPQP+L S+N LI A A D +S L + + + F +
Sbjct: 181 AAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240
Query: 132 FTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
FT LI A + C + K +H +AI F V NSL+ Y+ G LD A VF E
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVF-E 299
Query: 190 M--GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
M G KD VSWNSMV + Q +AL LF+ M + + + T+ S+++A +L
Sbjct: 300 MIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNL 359
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG-----------DMRDCMK-------- 288
G + ++ ++ N ++ + ID++ KC + RD +
Sbjct: 360 TLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGY 419
Query: 289 -----------VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK--KLNRVGYHPDDC 335
+F+ +P+ D+ WN +ISGY Q +AL F+ +L + G PD
Sbjct: 420 AKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGR-PKEALAIFRELQLTKSGARPDQV 478
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ + +SAC+ L +G+ IH K I+ NR ++ +L+ MYSK G++E A +F
Sbjct: 479 TLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNR-NLATSLIDMYSKSGDVEKAIEVFHS 537
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ + ++MIAG A HG G A+ LF M ET + P ++TF ++L AC+H+G V EG
Sbjct: 538 IGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEG 597
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----------- 503
++ F M+ ++G P+ +HYSCM+D+LGRAG L +A + IE MP P +
Sbjct: 598 KRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACC 657
Query: 504 ------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
+A KA + L++EP N YV+L+N+YA +G WE V+ +R+ MRD G++K+ G
Sbjct: 658 IHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGC 717
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEK 604
S IE+ +H F+ D +HP+ ++I+ L+E+ +++ GYV + KEK
Sbjct: 718 SSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEK 777
Query: 605 RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L HSEK+A+AFGL+ + I ++KNLR+C DCH K +S + GR+I +RD YRFH
Sbjct: 778 ALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFH 837
Query: 665 CFKDGRCSCGDYW 677
F G CSC DYW
Sbjct: 838 HFSGGHCSCQDYW 850
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 183/390 (46%), Gaps = 53/390 (13%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF--LDEAKRVFYEMGEIKDEVSWNSMVVA 205
+KQ+H + H + L T + + F LD A++VF ++ + + SWN ++ A
Sbjct: 155 LKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQ-PNLYSWNILIRA 213
Query: 206 YGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+ ++++ +F M+ G + +T ++ A + G H IK+ F
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGD 273
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ + + LI YA C G + VFE I D+V WN+M++G+ Q Y D+AL F
Sbjct: 274 DVFVLNSLIHFYASC-GHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGG-YPDKALDLF 331
Query: 323 KKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
+++ G HP+ + V V+SAC+ ++ +LG+++ + E+ N ++V NA + M+ K
Sbjct: 332 ERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN-LNVCNATIDMFVK 390
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYA---QHGIGMEALRLFEWMLETNIP------ 432
CG +E AR LFD M + + VS ++I GYA +HGI A +F+ M +IP
Sbjct: 391 CGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI---ARDIFDSMPRKDIPAWNVLI 447
Query: 433 ---------------------------PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
P +T +S LSACA G + G+ +K
Sbjct: 448 SGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE- 506
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ + +ID+ ++G D E+ IE
Sbjct: 507 RIQLNRNLATSLIDMYSKSG---DVEKAIE 533
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 147/311 (47%), Gaps = 8/311 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C +L G+ + +N + + + N I ++ KCG + A F+
Sbjct: 345 TMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNM 404
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+ ++ YA+ AR +FD +P+ D+ ++N LIS Y G + AL++F+
Sbjct: 405 EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFR 464
Query: 121 DMREKRFDT--DGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+++ + D TL ++A + + + + +H ++ SL+ YS+
Sbjct: 465 ELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSK 524
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G +++A VF+ +G KD W++M+ H G A++LF +M Q+ + T +
Sbjct: 525 SGDVEKAIEVFHSIGN-KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTN 583
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L A + + G + + + G + S ++D+ + +G + + +K E +P
Sbjct: 584 LLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGR-AGHLEEALKFIEGMPL 642
Query: 295 QPDLVLWNTMI 305
P +W ++
Sbjct: 643 APSASVWGALL 653
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/712 (32%), Positives = 374/712 (52%), Gaps = 72/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L C L G +H L+ ++ I +Y+KCG + A +F +
Sbjct: 108 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+H +V S+ ++AA + + A AR L+ ++ P+ ++ T+ +AY D
Sbjct: 168 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGD-------- 219
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ ++G + L+++ + V NS + +
Sbjct: 220 --------PHYLSEGKFIYSLVSSRV-----------------MESDVRVMNSAMNMFGN 254
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L +A+R+F +M + +D V+WN ++ Y Q+ EA++LF + + + T
Sbjct: 255 AGLLGDARRLFEDMVD-RDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVL 313
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L +TSL L G H + ++G+ ++ + + L+ LY +C + K+F ++
Sbjct: 314 MLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQ-AWKIFVDMGSK 372
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D++ W M Y+Q + +AL F+++ G P + V V+ C++L+ G+QI
Sbjct: 373 DVITWTVMCVAYAQNG-FRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 431
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H+ I+ R + V AL+ MY KCG + +AR +F++M + + + NSM+ YAQHG
Sbjct: 432 HSHIIENGFRMEMV-VETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGY 490
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
E L+LF M ++FVSVLSA +H+G V +G +YF M F P E Y
Sbjct: 491 YDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYG 550
Query: 476 CMIDLLGRAGKLTDAERLIEAMP------------------FNPGSIALKAANHFLQLEP 517
C++DLLGRAG++ +A ++ + N A AA L+ +P
Sbjct: 551 CVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDP 610
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
S++ YV+L+N+YAA+G W+ V +R+LMR RGV+K+PG S IE+ ++H F+ D SHP
Sbjct: 611 SHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHP 670
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
I+ L+ ++ +M+ AGY+PD KE L +HSE+LA+AFGL+ST G
Sbjct: 671 RRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPG 730
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V+KNLR+C DCH A K+IS + GREI VRDT+RFH FKDGRCSC DYW
Sbjct: 731 TPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 224/468 (47%), Gaps = 15/468 (3%)
Query: 40 FILLYSKCGCLSAAHHAFNQTQHA-------NVFSFNVLLAAYARQLRIASARQLFDQIP 92
F+ L +C H H N L+ YA+ + A+Q+F+ +
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQ 150
+ D+ ++ +I Y GD + AL +F M+E+ T ++ AS+ +L +
Sbjct: 68 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+H + GF+ V +L+ Y++ G + A F + E +D VSW +M+ A QH
Sbjct: 128 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHD 186
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+ A L++ M + + TL ++ A+ L G ++ + + + +
Sbjct: 187 QFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMN 246
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
++++ +G + D ++FE++ D+V WN +I+ Y Q E + +A+ F +L + G
Sbjct: 247 SAMNMFGN-AGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG-EAVRLFGRLQQDGI 304
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
+D +FV +++ ++L S + GK IH L +K + V AL+++Y +C A
Sbjct: 305 KANDITFVLMLNVYTSLTSLAKGKVIHEL-VKEAGYDRDVVVATALMSLYGRCEAPGQAW 363
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
++F M + ++ M YAQ+G EAL+LF+ M PT+ T V+VL CAH
Sbjct: 364 KIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLA 423
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +G++ S + + GF E + +I++ G+ GK+ +A + E M
Sbjct: 424 ALQKGRQIHSHIIEN-GFRMEMVVETALINMYGKCGKMAEARSVFEKM 470
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 257/546 (47%), Gaps = 51/546 (9%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+S+ N+ +++H GF+ V L+ Y++ G + EA++VF E+ E KD +W
Sbjct: 16 SSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF-EILERKDVFAW 74
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
M+ Y Q + AL +F +M + T +IL A S E L G++ H +++
Sbjct: 75 TRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQ 134
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +G+ LI++Y KC G +R F+ + D+V W MI+ Q ++++ A
Sbjct: 135 QGFEGDVFVGTALINMYNKC-GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA-LAR 192
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP---SLGKQIHALTIKIEIRSNRISVNNALV 376
++++ G P+ + V +A + P S GK I++L + + + + V N+ +
Sbjct: 193 WLYRRMQLDGVVPNKITLYTVFNAYGD--PHYLSEGKFIYSL-VSSRVMESDVRVMNSAM 249
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
M+ G L DARRLF+ M + + V+ N +I Y Q+ EA+RLF + + I +I
Sbjct: 250 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDI 309
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TFV +L+ +A+G+ ++K+ G++ + + ++ L GR EA
Sbjct: 310 TFVLMLNVYTSLTSLAKGKVIHELVKEA-GYDRDVVVATALMSLYGRC----------EA 358
Query: 497 MPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
PG +A F+ + + + + ++ YA +G +E + + M+ G ++P
Sbjct: 359 ----PG----QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG--RRPT 408
Query: 557 -------------FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM---SRKMKQAGYVP 600
+ ++ +Q+H + E+G M + L M KM +A V
Sbjct: 409 SATLVAVLDTCAHLAALQKGRQIHSHIIENGFR-MEMVVETALINMYGKCGKMAEARSVF 467
Query: 601 DK-EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG--REITV 657
+K KR + + A+ Y E + + +++ G+ +A+ F+S ++ +V
Sbjct: 468 EKMAKRDILVWNSMLGAYA-QHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSV 526
Query: 658 RDTYRF 663
D Y++
Sbjct: 527 TDGYQY 532
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 163/342 (47%), Gaps = 22/342 (6%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D ++L +S +++ G + H H+ GF QN+ + LI +YA+C G + + +V
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQC-GSVPEAQQV 62
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLS 348
FE + + D+ W MI Y Q+ +Y D+ALG F ++ P ++V +++AC S S
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDY-DRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G +IH ++ + + V AL+ MY+KCG++ A F R+ + VS +MIA
Sbjct: 122 LKDGMEIHGQILQQGFEGD-VFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
QH A L+ M + P IT +V +A ++EG+ +S++ E
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV-ME 239
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAM---PFNPGSIAL----------KAANHFLQL 515
+ + +++ G AG L DA RL E M +I + +A F +L
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299
Query: 516 E----PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
+ +N + +V++ N+Y + + I L+++ G +
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 341
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 330 YHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
+ PD FV ++ CS+ + G+++H N + V L+ MY++CG++ +A
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNL-VCGHLIQMYAQCGSVPEA 59
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+++F+ + + + MI Y Q G AL +F M E ++ PT +T+V++L+ACA T
Sbjct: 60 QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ +G + + GFE + + +I++ + G + A
Sbjct: 120 ESLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGA 160
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/641 (36%), Positives = 349/641 (54%), Gaps = 36/641 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL Y +++FD++ +LVS+ +ISAYA G+ E A+ LF DM+
Sbjct: 126 NCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIR 185
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ L+ + + L L KQ+H I + +V ++ Y R G+L+ AK V
Sbjct: 186 PNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLV 245
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + ++ V+W ++V Y Q ++ AL+LF M + LD + + +L LED
Sbjct: 246 FDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLED 304
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G Q H+H++K G +G+ L+D Y KC GD+ + F I +P+ V W+ +IS
Sbjct: 305 WDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKC-GDIESAYRSFGRISEPNDVSWSALIS 363
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIR 365
G+SQ D + F L G + + V AC+ + ++G Q H IK +
Sbjct: 364 GFSQSGRLED-CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S + +A+V MYSKCG L+ ARR F+ + E + V+ ++I+GYA HG EAL F
Sbjct: 423 S-YLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + P +TF++VL+AC+H+G VAE ++Y M +G +P +HY CMID RAG
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 486 KLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLAN 528
L +A LI MPF P +++ K AA + +L+P + Y++L N
Sbjct: 542 LLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFN 601
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
+Y+A GKWEE +R+LM +R ++K+ SWI VK Q+H FV D HP + I++ LEE
Sbjct: 602 LYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEE 661
Query: 589 ------------MSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
++ + + + ++++L+ HSEKLA+AFGL+ST PILV KNLR
Sbjct: 662 FKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRA 721
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH K +S + GR+I VRD+ RFH FK G+CSC DYW
Sbjct: 722 CRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 173/364 (47%), Gaps = 9/364 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H +AN+ + Y R + A+ +FD + + V++ L+ Y E
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
AL LF M + + D F S ++ + + +Q+H + G + SV L+
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVD 332
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y + G ++ A R F + E D VSW++++ + Q + +++F + S + L+ +
Sbjct: 333 FYVKCGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
S+ A + +L G Q H IK G + S ++ +Y+KC G + + FE
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKC-GRLDYARRAFES 450
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPS 350
I +PD V W +ISGY+ + +ALG F+++ G P+ +F+ V++ACS+ L
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAA-EALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAE 509
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
+ + +++ ++ I + ++ YS+ G L++A L +RMP E + +S S++ G
Sbjct: 510 AKQYLGSMSRDYGVKPT-IDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
Query: 410 YAQH 413
H
Sbjct: 569 CWAH 572
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK C G D G+ +H+ +K + + Y KCG + +A+ +F +
Sbjct: 291 VFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S++ LIS ++ G E + +F
Sbjct: 351 SEPNDVSWS-------------------------------ALISGFSQSGRLEDCIKIFT 379
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R + + F + + A+ NL + Q H AI G Y ++++T YS+ G
Sbjct: 380 SLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCG 439
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD A+R F + E D V+W +++ Y H EAL F+ M S + + T ++L
Sbjct: 440 RLDYARRAFESIDE-PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVL 498
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
TA + + Q+ + + G +ID Y++ +G +++ +++ +P +P
Sbjct: 499 TACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSR-AGLLQEALELINRMPFEP 557
Query: 297 DLVLWNTMISG 307
D + W +++ G
Sbjct: 558 DAMSWKSLLGG 568
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 336 SFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
S+ C+ AC L S + G+ IH ++ +++ S+ N L+ MY CG+ D +++FD
Sbjct: 89 SYQCLFEACGKLRSLADGRLIHD-RLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDE 147
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
M N VS +I+ YA++G +A+RLF M + I P + ++S+L +C
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC 198
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 358/650 (55%), Gaps = 44/650 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A+ F + L Y R AR++FD +P PD V +NTL+ A +E+ + +
Sbjct: 156 ADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLL---AGLSGSEALEAFVRMA 212
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
D TL+ ++ A++ N + + +H CG + V L++ Y++ G +
Sbjct: 213 GAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDM 272
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+ A+ +F M E D V++N+++ Y + +++LF+E+V + L TL +++
Sbjct: 273 ECARHLFDRM-EGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPV 331
Query: 241 FTSL--EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ E L G L HAH++K+G N+ + + L LY + + DM + F+ +P+ +
Sbjct: 332 HSPFGHEPLAGCL--HAHVVKAGLDANAPVSTALTTLYCRFN-DMDSARRAFDAMPEKTM 388
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
WN MISGY+Q ++ A+ F+++ + P+ + +SAC+ L SLGK +H
Sbjct: 389 ESWNAMISGYAQNG-LTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHK 447
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ ++ N + V AL+ MY KCG++ +AR +FD M N VS N MI+GY HG G
Sbjct: 448 IIANEKLELN-VYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGA 506
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL+L++ M++ ++ PT+ TF+SVL AC+H G V EG F M +G P EH +CM
Sbjct: 507 EALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCM 566
Query: 478 IDLLGRAGKLTDAERLIEAMP---FNP---------------GSIALKAANHFLQLEPSN 519
+DLLGRAG+L +A LI P P G +A A+ +LEP N
Sbjct: 567 VDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPEN 626
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+L+N+Y + ++ E A +R+ + R + K PG + IE+ + HVF+A D +HP
Sbjct: 627 TGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQS 686
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLSTSYGEP 627
I+ YLE+++ KM +AGY PD E L HSEKLA+AFGLL+T G
Sbjct: 687 DAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTE 746
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLR+C DCHNA K IS + R I VRD RFH F+DG CSCGDYW
Sbjct: 747 IRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 207/433 (47%), Gaps = 27/433 (6%)
Query: 79 LRIASAR-------QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
LR AS R +L+ P+PD N+L+ + T A LF F
Sbjct: 65 LRYASLRSPPAHLLRLYRAFPRPDRFLRNSLLRSL----PTLRADLLFPSPDSFSFAFAA 120
Query: 132 FTLS-----GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+L+ G I+ S ++ LH LA+ GF V ++L Y ++A++V
Sbjct: 121 TSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKV 180
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLE 245
F + D V WN+++ G EAL+ F M + D TLAS+L A +
Sbjct: 181 FDAVPS-PDTVLWNTLLAGL----SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVA 235
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G HA K G Q+ H+ +GLI LYAKC GDM +F+ + PDLV +N +I
Sbjct: 236 NTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKC-GDMECARHLFDRMEGPDLVTYNALI 294
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEI 364
SGYS ++ FK+L +G P + V +I S L +HA +K +
Sbjct: 295 SGYSINGMVG-SSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGL 353
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+N V+ AL +Y + +++ ARR FD MPE S N+MI+GYAQ+G+ A+ LF+
Sbjct: 354 DAN-APVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQ 412
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M N+ P +T S LSACA G ++ G+ ++ + E + +ID+ +
Sbjct: 413 QMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANE-KLELNVYVMTALIDMYVKC 471
Query: 485 GKLTDAERLIEAM 497
G + +A + ++M
Sbjct: 472 GSIAEARCIFDSM 484
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 174/401 (43%), Gaps = 39/401 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL + G+ +HA K + ++ I LY+KCG + A H F++
Sbjct: 223 TLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRM 282
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ ++N L++ Y S N ++ S++ LFK
Sbjct: 283 EGPDLVTYNALISGY----------------------SINGMVG---------SSVELFK 311
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ TL LI S + L LH + G D A V+ +L T Y R
Sbjct: 312 ELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFN 371
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+R F M E K SWN+M+ Y Q+ A+ LFQ+M +L + + T++S L
Sbjct: 372 DMDSARRAFDAMPE-KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSAL 430
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G H + N ++ + LID+Y KC G + + +F+ + ++
Sbjct: 431 SACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKC-GSIAEARCIFDSMDNKNV 489
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V WN MISGY + + +AL +K + HP +F+ V+ ACS+ L
Sbjct: 490 VSWNVMISGYGLHGQGA-EALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFR 548
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
++T I I +V + + G L++A L P+
Sbjct: 549 SMTSDYGITPG-IEHCTCMVDLLGRAGQLKEAFELISEFPK 588
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 25/332 (7%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
GCL A H AN L Y R + SAR+ FD +P+ + S+N +IS YA
Sbjct: 342 GCLHA--HVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYA 399
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS 165
G TE A++LF+ M+ + T+S ++A + L L K +H + +
Sbjct: 400 QNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVY 459
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V +L+ Y + G + EA+ +F M + K+ VSWN M+ YG H +G EAL+L+++M+
Sbjct: 460 VMTALIDMYVKCGSIAEARCIFDSM-DNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDA 518
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------LIDLYAKC 279
L T S+L A + GGL + + I G ++DL +
Sbjct: 519 HLHPTSSTFLSVLYACSH-----GGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGR- 572
Query: 280 SGDMRDCMKVFEEIPQPDL--VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
+G +++ ++ E P+ + +W ++ G + D A +KL + P++ +
Sbjct: 573 AGQLKEAFELISEFPKSAVGPGIWGALL-GACMVHKDGDLAKLASQKLFEL--EPENTGY 629
Query: 338 VCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
++ SNL S + A ++ E +S ++
Sbjct: 630 YVLL---SNLYTSKKQYSEAAVVRQEAKSRKL 658
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 241 FTSLEDLVGGL-QFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
SL +G L Q A + SG + H S L+ YA ++++ P+PD
Sbjct: 30 LISLSSTLGHLDQLLAVSLASGHYTLDHAPASSLLLRYASLRSPPAHLLRLYRAFPRPDR 89
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF----VCVISACS--NLSPSLG 352
L N+++ ++L + + + PD SF + S+CS +SP
Sbjct: 90 FLRNSLL-----------RSLPTLRA-DLLFPSPDSFSFAFAATSLASSCSRGGISPPSA 137
Query: 353 -----KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+ +HAL + ++ V +AL +Y DAR++FD +P +TV N+++
Sbjct: 138 ASAALRPLHALAVASGFAADNF-VASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLL 196
Query: 408 AGYAQHGIGMEALRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQ 455
AG + G EAL F M ++ P + T SVL A A G+
Sbjct: 197 AGLS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGR 241
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/641 (35%), Positives = 355/641 (55%), Gaps = 37/641 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YA+ RI A +FD++PQ D++S+N++I A G + A+ LF M + +
Sbjct: 23 NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D TL ++ A S+ + +H ++ G S+ N+LL YS ++
Sbjct: 83 LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M E K+ VSW +M+ +Y + + LFQEM + D++ + S L AF E
Sbjct: 143 FRNM-EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNES 201
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G H + I++G + + + L+++Y KC G M + +F+ + + D + WNT+I
Sbjct: 202 LKHGKSVHGYAIRNGIEEVLPVANALMEMYVKC-GYMEEARFIFDHVTKKDTISWNTLIG 260
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
GYS + +++A F ++ + P+ + C++ A ++LS G+++HA ++
Sbjct: 261 GYS-RSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYL 318
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ V NALV MY KCG L ARRLFD + N +S MIAGY HG G +A+ LFE
Sbjct: 319 EDNF-VANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQ 377
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + I P +F ++L AC+H+G EG ++F+ M++ EP+ +HY+CM+DLL G
Sbjct: 378 MKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTG 437
Query: 486 KLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLAN 528
L +A IE MP P S +A K A +LEP N YV+LAN
Sbjct: 438 NLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLAN 497
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA + +WE V ++ + RG+++ G SWIEV+ + H+F AE+ +HP I +L++
Sbjct: 498 IYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDD 557
Query: 589 MSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
++R+M++ G+ P K ++ L HS KLAVAFG+L+ S G PI V KN R+
Sbjct: 558 VARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRV 617
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C CH A KFIS + GREI +RD+ RFH F++GRCSC YW
Sbjct: 618 CSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 198/408 (48%), Gaps = 27/408 (6%)
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+H + GF +V N+L++ Y+++ +++A VF EM + +D +SWNS++ +
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ-RDIISWNSIIGGCASNG 64
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTA-FTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+A++LF M LD TL S++ A S +GG+ H + +++G + +G
Sbjct: 65 LYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGV-VHGYSVRTGLISETSLG 123
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ L+D+Y+ CS D R K+F + Q ++V W MI+ Y++ + D+ G F+++ G
Sbjct: 124 NALLDMYSNCS-DWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHF-DKVAGLFQEMGLEG 181
Query: 330 YHPDDCSFVCVISA-CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
PD + + A N S GK +H I+ I + V NAL+ MY KCG +E+A
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEE-VLPVANALMEMYVKCGYMEEA 240
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R +FD + + +T+S N++I GY++ + EA LF ML + P +T +L A A
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASL 299
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ G++ + G+ + + ++D+ + G L A RL
Sbjct: 300 SSLERGREMHAYAVRR-GYLEDNFVANALVDMYVKCGALLLARRL--------------- 343
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
F L N + + ++ Y G+ + + M+ G+Q G
Sbjct: 344 ---FDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAG 388
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
GL H +L+K GF + + LI YAK S + D + VF+E+PQ D++ WN++I G +
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAK-SNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNR 368
Y D+A+ F ++ G D + + V+ AC S +G +H +++ + S
Sbjct: 62 SNGLY-DKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLIS-E 119
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
S+ NAL+ MYS C + ++F M + N VS +MI Y + G + LF+ M
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL 179
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQ 455
I P S L A A + G+
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGK 206
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 42/308 (13%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L G L GKS+H ++N + ++N + +Y KCG + A F+ +
Sbjct: 193 LDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDT 252
Query: 66 FSFNVLLAAYARQLRIASARQLFDQI---PQPDLVSYNTLISAYADCGDTESALSLFKDM 122
S+N L+ Y+R A LF+++ +P+ V+ ++ A A E
Sbjct: 253 ISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERG------- 305
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+++H A+ G+ V N+L+ Y + G L
Sbjct: 306 --------------------------REMHAYAVRRGYLEDNFVANALVDMYVKCGALLL 339
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA-- 240
A+R+F +M K+ +SW M+ YG H G +A+ LF++M + D + ++IL A
Sbjct: 340 ARRLF-DMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACS 398
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ L D G F+A + + ++DL +G++++ + E +P +PD
Sbjct: 399 HSGLRD-EGWRFFNAMRNEHRIEPKLKHYACMVDLLCH-TGNLKEAYEFIETMPIEPDSS 456
Query: 300 LWNTMISG 307
+W +++ G
Sbjct: 457 IWVSLLRG 464
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G +H +K + + +V NAL++ Y+K +EDA +FD MP+ + +S NS+I G A
Sbjct: 3 GLVVHGYLVKYGFGA-QCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT-----GKVAEGQKYFSMMKDMFG 466
+G+ +A+ LF M + T +SV+ AC + G V G + G
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRT------G 115
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
E + ++D+ ++ F +E N V + +
Sbjct: 116 LISETSLGNALLDMYSNCSDWRSTNKI------------------FRNMEQKNVVSWTAM 157
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKK-----------PGFSWIEVKKQMHVFVAEDGS 575
Y +G +++VA + + M G++ G ++ K +H + +G
Sbjct: 158 ITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGI 217
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSY 624
++ + N L EM K GY+ + H ++K +++ L Y
Sbjct: 218 EEVLP-VANALMEMYVK---CGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L L G+ +HA ++ +++N + +Y KCG L A F+
Sbjct: 288 TMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDML 347
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ N+ S+ +++A Y R A LF+Q+ QPD S++ ++ A + G +
Sbjct: 348 TNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGW 407
Query: 117 SLFKDMREK 125
F MR +
Sbjct: 408 RFFNAMRNE 416
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F N L+ Y + + AR+LFD + +L+S+ +I+ Y G A++LF+ M+
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 126 RFDTDGFTLSGLITASSNN---------LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
D + S ++ A S++ ++ H I HYA + + L C++
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEH--RIEPKLKHYACMVD--LLCHTG 437
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ--------LG 228
N L EA M D W S++ HR A ++ + + L+ L
Sbjct: 438 N--LKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLL 495
Query: 229 LDMYTLASILTAFTSLEDLVGG 250
++Y A A L++ VGG
Sbjct: 496 ANIYAEAERWEAVRKLKNKVGG 517
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/657 (35%), Positives = 359/657 (54%), Gaps = 65/657 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ I +P+L+ +NT+ +A D SAL L+ M + +T L+ A
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + G+D V+ SL++ Y +NG L++A++VF
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ +KD VSWN+M+ Y + EAL+LF+EM+ + D
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ ++++A + G Q H+ + GF N I + L+DLY+KC G++ +FE
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKC-GELETACGLFE 325
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 326 GLLYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGERPNDVTMLSILPACAHLGAID 384
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + +++ +N S+ +L+ MY+KCG++E A ++F+ + + S N+MI G
Sbjct: 385 IGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG A +F M + I P +ITFV +LSAC+ +G + G+ F M + P
Sbjct: 445 FAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITP 504
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDLLG +G +AE +I M P + LKA A +
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNL 564
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N YV+L+NIYA +G+W EVA IR L+ D+G++K PG S IE+ +H F+
Sbjct: 565 IKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFGL+
Sbjct: 625 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 684
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 685 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 37/279 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDL--YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S L++L + + + VFE I +P+L++WNTM G++
Sbjct: 52 IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F ++ +C+ G+QIH +K+ + +
Sbjct: 112 SSD-PVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLD-L 169
Query: 370 SVNNALVAMYSKCGNLEDARRLFDR-------------------------------MPEH 398
V+ +L+++Y + G LEDAR++FDR +P
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+MI+GYA+ G EAL LF+ M++TNI P T V+V+SACA +G + G++
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S + D GF + + ++DL + G+L A L E +
Sbjct: 290 SWIDD-HGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/709 (34%), Positives = 375/709 (52%), Gaps = 72/709 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L++ V + G+++HA ++ ++ P ++LSNH + +YSK L++A H + T
Sbjct: 12 LLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLR 71
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
V ++ L++ R +P AL F +MR
Sbjct: 72 TVVTWTSLISGCVHNRRF---------LP----------------------ALLHFTNMR 100
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ FT + AS+ + KQ+H LA+ G + V S Y + GF
Sbjct: 101 RDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRG 160
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A +F EM + ++ +WN+ + Q R L+A+ F+E + + + T + L A
Sbjct: 161 DACNMFDEMPQ-RNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNAC 219
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ L G Q HA +++ G+ ++ + +GLID Y KC GD+ VF I + ++V
Sbjct: 220 VDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKC-GDIVSAEMVFNRIGNRKNVVS 278
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W +M++ Q E ++A F + R P D V+SAC+ L LG+ +HAL
Sbjct: 279 WCSMLAALVQNHE-EERACMVFLQA-RKEVEPTDFMISSVLSACAELGGLELGRSVHALA 336
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K + N I V +ALV MY KCG++E+A ++F +PE N V+ N+MI GYA G A
Sbjct: 337 VKACVEDN-IFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMA 395
Query: 420 LRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
LRLFE M I P+ +T +S+LS C+ G V G + F M+ +G EP EH++C+
Sbjct: 396 LRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACV 455
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSNA 520
+DLLGR+G + A I+ M P G L AA +L+ ++
Sbjct: 456 VDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDS 515
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+N+ A++G+WEE +R+ M+D G++K G+SWI VK ++HVF A+D SH
Sbjct: 516 GNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNS 575
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI L ++ MK+AGYVPD K + +HSEK+A+AFGL++ G PI
Sbjct: 576 EIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPI 635
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLRICGDCH+AIKFIS I GREI VRD +RFH FKDG CSC DYW
Sbjct: 636 RITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 6/260 (2%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L S+L + S + G HAH+I++ S + + L+++Y+K + V
Sbjct: 9 LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLD-LLNSAQHVLSL 67
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSL 351
+V W ++ISG + AL F + R P+D +F CV A + + P
Sbjct: 68 THLRTVVTWTSLISGCVHNRRFL-PALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMT 126
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIH L +K + + + V + MY K G DA +FD MP+ N + N+ I+
Sbjct: 127 GKQIHGLALKGGMIYD-VFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q ++A+ F+ L + P +ITF + L+AC ++ G++ + + G++ +
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRC-GYKEDV 244
Query: 472 EHYSCMIDLLGRAGKLTDAE 491
+ +ID G+ G + AE
Sbjct: 245 SVANGLIDFYGKCGDIVSAE 264
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 167/380 (43%), Gaps = 49/380 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L CV L G+ LHA ++ ++N I Y KCG + +A FN
Sbjct: 211 TFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFN-- 268
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
RI + + ++VS+ ++++A + E A +F
Sbjct: 269 -------------------RIGN---------RKNVVSWCSMLAALVQNHEEERACMVFL 300
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R++ TD F +S +++A + L L + +H LA+ + V ++L+ Y + G
Sbjct: 301 QARKEVEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCG 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLAS 236
++ A++VF E+ E ++ V+WN+M+ Y + AL+LF+EM G+ TL S
Sbjct: 360 SIENAEQVFSELPE-RNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLIS 418
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
IL+ + + + G+Q F + + G + + ++DL + SG + + + +
Sbjct: 419 ILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGR-SGLVDRAYEFIQNMAI 477
Query: 295 QPDLVLWNTMISGYSQ--KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
QP + +W ++ K E A +L+ H D + V + SN+ S G
Sbjct: 478 QPTISVWGALLGACRMHGKTELGKIAAEKLFELD----HVDSGNHVVL----SNMLASAG 529
Query: 353 KQIHALTIKIEIRSNRISVN 372
+ A ++ E++ I N
Sbjct: 530 RWEEATVVRKEMKDIGIKKN 549
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 13/174 (7%)
Query: 331 HPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
HP + + SA S LG+ IHA I+ + ++N LV MYSK L A+
Sbjct: 4 HPQNLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQH 63
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH--- 447
+ V+ S+I+G + + AL F M N+ P + TF V A A
Sbjct: 64 VLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQI 123
Query: 448 --TGKVAEGQKY-FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
TGK G M+ D+F SC D+ + G DA + + MP
Sbjct: 124 PMTGKQIHGLALKGGMIYDVF------VGCSCF-DMYCKTGFRGDACNMFDEMP 170
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/656 (34%), Positives = 358/656 (54%), Gaps = 58/656 (8%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++L CV R +S+H ++ ++ N I +Y KCG L A F++
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NVFSFN +++ R + + LF +P+ D S+N++I+ +A E AL F
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M F + ++ ++A S +L L Q+H L + + + L+ YS+ G
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+RVF M E K+ VSWN ++ Y Q+ +EAL+ F M L D TLAS+++
Sbjct: 207 VGCARRVFDGMEE-KNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKC------------------- 279
A +L G+Q HA ++KS +N I G+ L+D+YAKC
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAV 325
Query: 280 -----------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
S ++ +F I Q D+V WN +I+GY+Q E +++ALG F+ L R
Sbjct: 326 SETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGE-NEEALGLFRMLKRE 384
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAMYSKC 382
P +F +++A +NL+ LG+Q H+ +K R I V N+L+ MY KC
Sbjct: 385 SVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKC 444
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G++E+ R+F+ M E + VS N+MI GYAQ+G GMEAL LF+ MLE+ P ++T + L
Sbjct: 445 GSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTL 504
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
AC+H G V EG++YF M G P +HY+CM+DLLGRAG L +A+ LIE+MP P
Sbjct: 505 CACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPD 564
Query: 503 SIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ + A +++P+++ PYV+LAN+Y+ G+W + ++R+L
Sbjct: 565 AVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKL 624
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
MR RGV K+PG SWI+++ +HVF+ +D HP KEI++ L+ +++ M+QAGYVPD
Sbjct: 625 MRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 46/366 (12%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--------- 280
D A +L L H LI++ F + I + LID+Y KC
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 281 ---------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
G + + +F +P+ D WN+MI+G++Q + + ++AL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRF-EEAL 141
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F +++R + +D SF +SACS L LG QIH L K + S + + + L+
Sbjct: 142 DWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKY-SLDVFMGSGLIDF 200
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
YSKCG + ARR+FD M E N VS N +I Y Q+G +EAL F M E P +T
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTL 260
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
SV+SACA EG + + + F + + ++D+ + G++ +A + + MP
Sbjct: 261 ASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Query: 499 FNPG------------SIALKAA-NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
S ++KAA + F ++ + V + L Y +G+ EE + R+
Sbjct: 321 VRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRM 380
Query: 546 MRDRGV 551
++ V
Sbjct: 381 LKRESV 386
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/708 (34%), Positives = 368/708 (51%), Gaps = 104/708 (14%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+A+Y+ A + IP P + S+++LI A ++ +F M D
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 131 GFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL------------------ 170
L L + A + KQ+HC+A G D A V SL
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 171 -------LTC------YSRNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLE 214
+TC Y+R G L+E R+ EM G + VSWN ++ + + E
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A+ +FQ+M L D T++S+L + E+L G Q H ++IK G ++ + S ++D
Sbjct: 236 AVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLD 295
Query: 275 LYAKCSGDMRDCMKVFEEIP-----------------------------------QPDLV 299
+Y K SG + +K+F+E + ++V
Sbjct: 296 MYGK-SGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVV 354
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W ++I+G +Q + +AL F+++ G P+ + ++ AC N++ G+ H
Sbjct: 355 SWTSIIAGCAQNGK-DIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+++ + + + V +AL+ MY+KCG ++ ++ +F+ MP N V NS++ GY+ HG E
Sbjct: 414 AVRVHLLDD-VHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKE 472
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+ +FE ++ T + P I+F S+LSAC G EG KYF+MM + +G +P EHYSCM+
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMV 532
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
+LLGRAGKL +A LI+ +PF P S +A AA LEP N
Sbjct: 533 NLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPG 592
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+++NIYAA G W EV +IR M G++K PG SWI+VK +++ +A D SHP I +
Sbjct: 593 TYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQ 652
Query: 582 IHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSEKLAVAFGLLSTSYGEPIL 629
I ++E+S +M+++G+ P+ + + L HSEKLAV FGLL+T G P+
Sbjct: 653 ITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQ 712
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLRICGDCH IKFIS+ AGREI +RDT RFH FKDG CSCGD+W
Sbjct: 713 VIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 203/434 (46%), Gaps = 45/434 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+ K C GK +H + + + A++ +Y +CG + A F++ +
Sbjct: 122 LFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKD 181
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFK 120
V + + LL YAR+ + ++ ++ +P++VS+N ++S + G + A+ +F+
Sbjct: 182 VVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQ 241
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCG------------------- 159
M F D T+S ++ S NL + +Q+H I G
Sbjct: 242 KMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSG 301
Query: 160 --------FDHY----ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE---VSWNSMVV 204
FD + V N+ +T SRNG +D+A +F E K E VSW S++
Sbjct: 302 HVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIA 361
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Q+ + +EAL+LF+EM + + T+ S+L A ++ L G H ++
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ H+GS LID+YAKC G ++ VF +P +LV WN++++GYS + + + + F+
Sbjct: 422 DVHVGSALIDMYAKC-GRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGK-AKEVMSIFES 479
Query: 325 LNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
L R PD SF ++SAC L+ K + ++ + I+ R+ + +V + +
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKP-RLEHYSCMVNLLGRA 538
Query: 383 GNLEDARRLFDRMP 396
G L++A L +P
Sbjct: 539 GKLQEAYDLIKEIP 552
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HA ++KSG + +I + LI Y+ + D + + IP P + ++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNC-FNDADLILQSIPDPTVYSFSSLIYALTKA 94
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+ +S Q++G F ++ G PD + C+ LS GKQIH + + +
Sbjct: 95 KLFS-QSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF- 152
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V +L MY +CG + DAR++FDRM E + V+ ++++ GYA+ G E +R+ M ++
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P +++ +LS +G E F M + GF P+ S ++ +G + L
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHL-GFCPDQVTVSSVLPSVGDSENLNMG 271
Query: 491 ERL 493
++
Sbjct: 272 RQI 274
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L G+S H ++ + ++ + I +Y+KCG + + FN
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMM 449
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N L+ Y+ + +F+ + +PD +S+ +L+SA G T+
Sbjct: 450 PTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 117 SLFKDMREK 125
F M E+
Sbjct: 510 KYFNMMSEE 518
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 252/770 (32%), Positives = 398/770 (51%), Gaps = 102/770 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F + ++ C R L K LH ++ + L+N I L+ KCG AA FN+ +
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N +S++ ++ AY RI AR LFD +P D ++N +I+AYA + A LF
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHG 129
Query: 122 MREKR------FDTDGFTLSGLITASS---NNLCLIKQLHCLAIYCGFDHY--------- 163
M R G+ + +S + L + C ++ G+ H
Sbjct: 130 MISGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQEL 189
Query: 164 -----------ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH--- 209
A+ N+++ Y +N +D A+ +F ++ ++++ SW+ +++ Y Q+
Sbjct: 190 FDRIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQI-KLRNAASWSLLLLTYAQNGHL 248
Query: 210 ------------REGLE------------ALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
R+ + L+ +EM+ +D+ ++L ++
Sbjct: 249 DLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSR-- 306
Query: 246 DLVGGLQFHAHLIKSGFHQN---SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
G L L + H+ + + L++LY KC G + D +V + +P V W
Sbjct: 307 --TGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKC-GRVDDARRVLDAMPVRTSVSWT 363
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
MI+ Y+Q + +A+ F+ ++ G P D + + V+ +C+ L SLGK+IHA
Sbjct: 364 AMIAAYAQNGNAA-EAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRS 422
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIGMEA 419
+ S + + NA++ MY KCGNLE AR +F+ +P + V+ +MI YAQ+G+G EA
Sbjct: 423 SPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEA 482
Query: 420 LRLFEWM-LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
+ LF+ M ++ P +TF+SVLSAC+H G++ + ++F M FG P G+HY C++
Sbjct: 483 IELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLV 542
Query: 479 DLLGRAGKLTDAERLI-----------------EAMPFNPGSI--ALKAANHFLQLEPSN 519
DLLGRAG+L +AE+L+ A N G + + +AA +LEP N
Sbjct: 543 DLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMN-GDLERSQRAAKRVSELEPEN 601
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
V+L+N+YAA G+ +VA IR M+ GV+K G SWIE+ ++H F+ D SHP
Sbjct: 602 VAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRK 661
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI++ LE + R++K+AGYVPD K + L +HSE+LA+A G++ST G
Sbjct: 662 LEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTT 721
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ V+KNLR+C DCH A KFIS I GR+I VRDT RFH FKDG CSCGDYW
Sbjct: 722 LRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/704 (35%), Positives = 384/704 (54%), Gaps = 61/704 (8%)
Query: 24 LYLKNLVPFSAYLSNHFILLYSKCG---CLSAAHHAFNQTQH----ANVFSFNVLLAAYA 76
++L+ L+P A F+ + S CG L A + + +V L+ Y
Sbjct: 224 MWLEGLLPNRA----SFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYG 279
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT--- 133
R + + +F+ + + VS+N +I+A+A CG +A +++ M+++ F + T
Sbjct: 280 RCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVT 339
Query: 134 -LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
L ++SS +L LH G + V +L+T Y G +D A+ F +
Sbjct: 340 ALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI-P 398
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
K+ VSWN+M+ AYG + EA++LF M L + S L ED+
Sbjct: 399 AKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK---VSYLAVLGCCEDVSEARS 455
Query: 253 FHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HA ++ +G F Q S I +G++ ++A+ SG + + M F+ D V WNT ++ S +
Sbjct: 456 IHAEVVGNGLFAQESSIANGVVRMFAR-SGSLEEAMAAFDATVVKDSVSWNTKVAALSAR 514
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA-LTIKIEIRSNRI 369
E+ A+ F + G+ PD + V V+ C++L LG+ I L+ IE+ + +
Sbjct: 515 EDLHG-AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERD-V 572
Query: 370 SVNNALVAMYSKCGN-LEDARRLFDRMPE--HNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
V +A++ M +KCG+ +++ RLF RMP+ + V+ N+MIA YAQHG G +AL+LF M
Sbjct: 573 VVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIM 632
Query: 427 LE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG-EHYSCMIDLLGRA 484
+ +++ P + TFVSVLS C+H G V +G F + +++ G E + EHY+C++D+LGR
Sbjct: 633 QQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRM 692
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G L +AE I MP S+ +AA F++L S++V YV+L+
Sbjct: 693 GYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLS 752
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKK-PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
NIYAA+G+WE+ +R M +R V+K+ PG S I VK ++H F A D SHP EI+ L
Sbjct: 753 NIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAEL 812
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
E + +++AGYVPD KE+ L +HSEKLA+AFGL+S + I V+KNL
Sbjct: 813 ERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNL 872
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCF-KDGRCSCGDYW 677
R+C DCH A KFI+ + REI VRD RFH F KDG CSCGDYW
Sbjct: 873 RVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 154/659 (23%), Positives = 268/659 (40%), Gaps = 104/659 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C+G DL G+ LH +K + + L N+ + +YSKC L A+ AF+
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 61 QHANVFSFNVLLAA----------YAR------------QLRI----------------- 81
+ + ++N L+AA Y R +L I
Sbjct: 86 RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSS 145
Query: 82 --ASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMR------------ 123
A AR + D I + DL L+ AY CG ESAL +F ++
Sbjct: 146 SRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIM 205
Query: 124 -----EKRFD-----TDGFTLSGLITASS------------NNLCLIKQLHCLAIYCGFD 161
++R D L GL+ + ++L L + +H GF
Sbjct: 206 ACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFL 265
Query: 162 HYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
V +L+T Y R G +DE+ VF M +++ VSWN+M+ A+ Q A ++
Sbjct: 266 GDVVVATALVTMYGRCGSVDESIAVFEAMA-VRNHVSWNAMIAAFAQCGHRSAAFAIYWR 324
Query: 222 MVSLQLGLDMYTLASILTAF--TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
M + T + L A +S +DL H + +G + +G+ L+ +Y
Sbjct: 325 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS- 383
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
+G + F+ IP ++V WN M++ Y + +A+ F + R P+ S++
Sbjct: 384 TGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGR-AREAMELFAAMKRQSLAPNKVSYLA 442
Query: 340 VISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
V+ C ++S + + IHA + + + S+ N +V M+++ G+LE+A FD +
Sbjct: 443 VLGCCEDVSEA--RSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKD 500
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
+VS N+ +A + A+ F M P T VSV+ CA G + G+
Sbjct: 501 SVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQ 560
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTD-AERLIEAMPFNPGSIALKAANHFLQLEPS 518
+ E + S +++++ + G D ERL MP + +
Sbjct: 561 QLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDL-------------- 606
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ-MHVFVAEDGSH 576
V + + YA G + + R+M+ R + +++ V H + EDG H
Sbjct: 607 --VAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIH 663
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 12/277 (4%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ + TLA +L DL G Q H ++K G +N +G+ L+ +Y+KC + D
Sbjct: 22 IPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRS-LDDANA 80
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNL 347
F + + WNT+I+ S D L KL R P+ + + V+ A ++
Sbjct: 81 AFSALRSRGIATWNTLIAAQSSPAAVFD--LYTRMKLEERAENRPNRLTIIAVLGAIASG 138
Query: 348 SPSLGK--QIHALTIKIEIRSNRIS----VNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
PS + A + +IR + + V AL+ Y KCG +E A +F R+ + +
Sbjct: 139 DPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 198
Query: 402 SLNSMIAGYAQHGIGME-ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
N+ I A + + AL L M + P +FV++LS+C + + +
Sbjct: 199 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 258
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++++ GF + + ++ + GR G + ++ + EAM
Sbjct: 259 VEEL-GFLGDVVVATALVTMYGRCGSVDESIAVFEAM 294
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 240/683 (35%), Positives = 370/683 (54%), Gaps = 44/683 (6%)
Query: 31 PFSAYLSNHFILL-YSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
P S+ S +F L + K L +A FN+ +V + LL AYA + A LF+
Sbjct: 53 PKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFN 112
Query: 90 QIPQ--PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCL 147
QIP D +S+N++I A C D +A+ LF +M ++ + + G ++ N
Sbjct: 113 QIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEA- 171
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
++ Y D + N+++ Y NG +++A R+F +M +D +SW S++V
Sbjct: 172 -ERFFNAMPY--VDKDVATWNAMVNGYCNNGRVNDALRLFCQMPS-RDVISWTSIIVGLD 227
Query: 208 QHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF--HQ 264
++ + +AL F+ MV +G+ TL L+A + D G+Q H + K GF
Sbjct: 228 RNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGL 287
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ + + L+ YA C M D KVF E ++V+W +++G +++ +AL F +
Sbjct: 288 DEFVSASLVTFYASCK-RMGDACKVFGETVCKNVVVWTALLTGCGLNDKHV-EALEVFSE 345
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ R P++ SF +++C L G+ IHA IK+ + N + N+LV MYSKCG
Sbjct: 346 MMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLE-NAVYTGNSLVVMYSKCG 404
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+ DA +F + E N VS NS+I G AQHG G AL LF+ ML + IT +LS
Sbjct: 405 FIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLS 464
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
AC+ +G + + + +F + EHY+CM+D+LGR G++ +AE L +MP S
Sbjct: 465 ACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANS 524
Query: 504 -----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+A +AA ++EP + YV+L+N+YA+S +W EVA IR M
Sbjct: 525 MVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKM 584
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK---- 602
+ G+ K+PG SWI +K H F++ D SHP+ +EI+ L + K+++ GY+PD+
Sbjct: 585 KHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFAL 644
Query: 603 --------EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
E+ L +HSE+LA+AFGLLST G I +MKNLR+CGDCH AI ++ I RE
Sbjct: 645 HDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNRE 704
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD+ RFH FK+G CSCGDYW
Sbjct: 705 IVVRDSSRFHHFKNGICSCGDYW 727
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 44/217 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L +CVG DL G+ +HA +K + + Y N +++YSKCG
Sbjct: 357 SFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCG------------ 404
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A +F I + ++VS+N++I A G AL LFK
Sbjct: 405 -------------------FIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFK 445
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG--------FDHYASVNNSLLT 172
+M + ++D TL+GL++A S + ++++ C Y +HYA + + L
Sbjct: 446 EMLREGVESDEITLTGLLSACSRS-GMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGR 504
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
C G ++EA+ + M + + W ++ A H
Sbjct: 505 C----GEVEEAEALATSMPVEANSMVWLVLLSACRVH 537
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/646 (35%), Positives = 359/646 (55%), Gaps = 36/646 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A+ F + L Y + R AR++FD +P PD + +NTL++ E+ + + D
Sbjct: 147 ADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMV-DA 205
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
R D+ S A ++++ + + +H + CG + V L++ YS+ G +D
Sbjct: 206 GRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDS 265
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M D V++N+++ Y + +++LF+E+ + + TL +++ ++
Sbjct: 266 AQFLFDRMDN-PDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYS 324
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+ HA ++K+ ++ + + L LY + + DM +F+ + + + WN
Sbjct: 325 PFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN-DMESARSIFDAMLEKTMESWN 383
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
MISGY+Q ++ A+ F+ + + P+ + +SAC++L SLGK +H + K
Sbjct: 384 AMISGYAQNG-LTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISK 442
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
++ N + V AL+ MY+KCG++ +AR +FDRM N VS N+MI+GY HG G EAL+
Sbjct: 443 EKLELN-VYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALK 501
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
L++ ML+ I PT+ TF+SV+ AC+H G V EGQK F +M + + P EH +CM+DLL
Sbjct: 502 LYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLL 561
Query: 482 GRAGKLTDAERLIEAMP---FNPG---------------SIALKAANHFLQLEPSNAVPY 523
GRAGKL +A LI P PG +A A+ +L+ NA Y
Sbjct: 562 GRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYY 621
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+Y + + E A +R+ + R + K PG + IE+ + HVF+A D HP + I+
Sbjct: 622 VLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIY 681
Query: 584 NYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
+YLE ++ KM +AGY P +KE + HSEKLA+AFGLLST G I ++
Sbjct: 682 SYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRII 741
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCHNA KFIS + R I VRD RFH F+DG CSCGDYW
Sbjct: 742 KNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 209/433 (48%), Gaps = 22/433 (5%)
Query: 74 AYARQLRIASAR-------QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
A A LR AS R +LF P PD N L+ + LF
Sbjct: 56 ATALLLRYASLRAPPSHLLRLFRAFPCPDRFLRNALLRSLPSL----RPHLLFPSPDSFS 111
Query: 127 FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
F +LS ++ N+ + LH L++ G+ V ++L Y + D+A++V
Sbjct: 112 FAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKV 171
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLE 245
F + D + WN+++ G EAL+ F MV ++ D TLAS L A
Sbjct: 172 FDTVPS-PDTILWNTLLAGL----PGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEAS 226
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G H + +K G ++ H+ +GL+ LY+KC GDM +F+ + PDLV +N +I
Sbjct: 227 HMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKC-GDMDSAQFLFDRMDNPDLVAYNALI 285
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEI 364
SGYS + ++ FK+L G+ P+ + V VI S L + +HA +K +
Sbjct: 286 SGYSVN-GMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARL 344
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
++ + V+ AL +Y + ++E AR +FD M E S N+MI+GYAQ+G+ A+ LF+
Sbjct: 345 DADAL-VSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQ 403
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M E N+ P IT S LSACAH G ++ G K+ + E + +ID+ +
Sbjct: 404 LMQELNVQPNPITISSTLSACAHLGALSLG-KWVHRIISKEKLELNVYVMTALIDMYAKC 462
Query: 485 GKLTDAERLIEAM 497
G + +A + + M
Sbjct: 463 GSIAEARSIFDRM 475
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 174/401 (43%), Gaps = 39/401 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L+ + G+ +H +K + ++ + LYSKCG + +A F++
Sbjct: 214 TLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRM 273
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ ++N L IS Y+ G ES++ LFK
Sbjct: 274 DNPDLVAYNAL-------------------------------ISGYSVNGMVESSVELFK 302
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + + TL +I S + L + LH + D A V+ +L T Y R
Sbjct: 303 ELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN 362
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+ +F M E K SWN+M+ Y Q+ A+ LFQ M L + + T++S L
Sbjct: 363 DMESARSIFDAMLE-KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTL 421
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G H + K N ++ + LID+YAKC G + + +F+ + ++
Sbjct: 422 SACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKC-GSIAEARSIFDRMDNKNV 480
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V WN MISGY + + +AL +K + P +F+ VI ACS+ L K
Sbjct: 481 VSWNAMISGYGLHGQGA-EALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFR 539
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
+T + I I +V + + G L +A L P+
Sbjct: 540 VMTNEYRITPG-IEHCTCMVDLLGRAGKLNEALELISEFPQ 579
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/568 (38%), Positives = 337/568 (59%), Gaps = 35/568 (6%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A S NL +++H F A ++NSL+ Y + G + EA++VF EM KD VSW
Sbjct: 62 AQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRR-KDMVSW 120
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
S++ Y Q+ EA+ L M+ + + +T AS+L A + D G Q HA +K
Sbjct: 121 TSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVK 180
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+H++ ++GS L+D+YA+C G M VF+++ + V WN +ISG+++K + + AL
Sbjct: 181 CDWHEDVYVGSALLDMYARC-GMMDMATAVFDKLDSKNGVSWNALISGFARKGD-GETAL 238
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ R G+ ++ V S+ + L GK +HA IK + + N L+ M
Sbjct: 239 MTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFA-GNTLLDM 297
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+K G++ DAR++FDR+ + + V+ N+M+ +AQ+G+G EA+ FE M ++ I +TF
Sbjct: 298 YAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTF 357
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +L+AC+H G V EG++YF MMK+ + EPE +H+ ++ LLGRAG L A I MP
Sbjct: 358 LCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMP 416
Query: 499 FNP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + AA+H +L+P ++ P V+L NIYA++G+W+ A
Sbjct: 417 IEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAAR 476
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
+RR+M+ GV+K+P SW+E++ +H+FVA D +HP +EI+ ++S+K+++ GYVPD
Sbjct: 477 VRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPD 536
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+E L +HSEKLA+AF L+ G I +MKN+RICGDCH+A K+IS
Sbjct: 537 MDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISK 596
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ GREI VRDT RFH F +G CSC DYW
Sbjct: 597 VFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 148/265 (55%), Gaps = 13/265 (4%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+ +TA ++L + HAHL S F ++ + + LI LY KC G + + KVF+E+ +
Sbjct: 56 TFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKC-GSVLEARKVFDEMRR 114
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQ 354
D+V W ++I+GY+Q + ++A+G + + + P+ +F ++ A + S +G+Q
Sbjct: 115 KDMVSWTSLIAGYAQ-NDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHAL +K + + + V +AL+ MY++CG ++ A +FD++ N VS N++I+G+A+ G
Sbjct: 174 IHALAVKCDWHED-VYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM----KDMFGFEPE 470
G AL F ML T+ T+ SV S+ A G + +G+ + M + M F
Sbjct: 233 DGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAG- 291
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIE 495
+ ++D+ ++G + DA ++ +
Sbjct: 292 ----NTLLDMYAKSGSMIDARKVFD 312
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 12 RRDLVTGKSLHALYLKNLVPFSA-----------YLSNHFILL--------YSKCGCLSA 52
R+D+V+ SL A Y +N +P A + N F ++ G
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 53 AHH-AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H A H +V+ + LL YAR + A +FD++ + VS+N LIS +A GD
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
E+AL F +M F+ FT S + + A L K +H I A N+
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNT 293
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
LL Y+++G + +A++VF + + KD V+WN+M+ A+ Q+ G EA+ F+EM + L
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDD-KDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352
Query: 230 DMYTLASILTA 240
+ T ILTA
Sbjct: 353 NQVTFLCILTA 363
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H Q F+ N LL YA+ + AR++FD++ DLV++NT+++A+A G +
Sbjct: 278 HMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKE 337
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN--SLLT 172
A+S F++MR+ + T ++TA S+ + + + +D +++ +++
Sbjct: 338 AVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVA 397
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G L+ A ++M W +++ A H+
Sbjct: 398 LLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHK 435
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 240/692 (34%), Positives = 370/692 (53%), Gaps = 76/692 (10%)
Query: 46 KCGCLSAAHHAFNQTQ-HANVFSFNVLLAAYARQLR-IASARQLFDQIPQPDLVSYNTLI 103
K G L + H ++T +V +L Y + + + SA + F+ + + +++T+I
Sbjct: 238 KPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTII 297
Query: 104 SAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFD 161
+A + G + A ++++ K + L+GL + L Q+H +
Sbjct: 298 AALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSW-- 355
Query: 162 HYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
N+++T Y +N +DEA+ +F M ++ +SW M+ Y ++ +AL Q
Sbjct: 356 ------NAMITGYMQNEMVDEAEDLFNRM-PFRNTISWAGMIAGYARNGRSEQALVSLQA 408
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK--C 279
+ + + +L S A +++E L G Q H+ +K+G NS++ + LI LY K
Sbjct: 409 LHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRS 468
Query: 280 SGDMR----------------------------DCMKVFEEIPQPDLVLWNTMISGYSQK 311
G +R + VF +P PD+V W T+IS +Q
Sbjct: 469 IGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQA 528
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRIS 370
++ ++A+ F+ + P+ ++ NL +P LG+QIH + IK+ + S +
Sbjct: 529 DQ-GNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLV- 586
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V NALV+MY KC + D+ ++FD M E + + N++I GYAQHG+G EA+R+++ M+
Sbjct: 587 VANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAG 645
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P +TFV +L AC+H+G V EG ++F M +G P EHY+CM+DLLGRAG + A
Sbjct: 646 VLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGA 705
Query: 491 ERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAAS 533
E I MP P S I +AA +EPSNA YVML+NIY++
Sbjct: 706 EHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQ 765
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
G W+EVA +R+LM++RGV K PG SW+++K +MH FV D H I+ I+ L E+ +
Sbjct: 766 GMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLL 825
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K GYVPD KE L++HSEKLAVA+GLL T G PI +MKNLRICGDCH
Sbjct: 826 KATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCH 885
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
IKF+S++ REI VRD RFH F++G CSC
Sbjct: 886 TFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 230/528 (43%), Gaps = 79/528 (14%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAY----------LSNHFILL--YSKCGCLSAAHHAFNQT 60
RD++ S+ Y N +P + L ILL Y++ G + A F+
Sbjct: 62 RDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVRDARRVFDGM 121
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N ++N ++ Y + I AR+LFD +P D+ S+NT+++ Y E A +LF+
Sbjct: 122 GVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFE 181
Query: 121 DMREKRFDTDGFTLSGLI--------------------TASSNNLC-------------L 147
M E+ + +SG + T NL +
Sbjct: 182 RMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGI 241
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRN-GFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
++ +H L GF+ V ++L Y+++ LD A + F+E ++E +W++++ A
Sbjct: 242 LESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVK-FFEGMAARNEYTWSTIIAAL 300
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q +A ++Q L + S ++ GL + + + +
Sbjct: 301 SQAGRIDDAFAVYQR--------------DPLKSVPSRTSMLTGLARYGRIDDAKILFDQ 346
Query: 267 HIGSGLIDLYAKCSGDMRDCM-----KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
++ A +G M++ M +F +P + + W MI+GY++ S+QAL
Sbjct: 347 IHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGR-SEQALVS 405
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ L+R G P S ACSN+ GKQ+H+L +K + N V NAL+ +Y
Sbjct: 406 LQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSY-VCNALITLYG 464
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP-PTNITFV 439
K ++ R++FDRM +TVS NS ++ Q+ + EA +F N+P P +++
Sbjct: 465 KYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVF-----NNMPSPDVVSWT 519
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+++SACA + E + F M E E + + LLG +G L
Sbjct: 520 TIISACAQADQGNEAVEIFRSML----HERELPNPPILTILLGLSGNL 563
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 7/301 (2%)
Query: 9 CVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSF 68
C L TGK +H+L +K F++Y+ N I LY K + + F++ + S+
Sbjct: 428 CSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSY 487
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N ++A + AR +F+ +P PD+VS+ T+ISA A A+ +F+ M +R
Sbjct: 488 NSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL 547
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ L+ L+ S N L +Q+H +AI G D V N+L++ Y + D K V
Sbjct: 548 PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLK-V 606
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M E +D +WN+++ Y QH G EA++++Q MVS + + T +L A +
Sbjct: 607 FDSMEE-RDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665
Query: 247 LVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
+ G QF + G + ++DL + +GD++ ++P +PD V+W+ +
Sbjct: 666 VDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGR-AGDVQGAEHFIYDMPIEPDSVIWSAL 724
Query: 305 I 305
+
Sbjct: 725 L 725
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 186/421 (44%), Gaps = 28/421 (6%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
+ G L A F+ ++ ++N ++ AY + R L D I +L + L+S
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS 165
YA G A +F DG + + ++ C ++ FD S
Sbjct: 105 YARAGRVRDARRVF----------DGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPS 154
Query: 166 VN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
+ N++LT Y + ++EA+ +F M E ++ VSW M+ Y + A +F+
Sbjct: 155 RDVSSWNTMLTGYCHSQLMEEARNLFERMPE-RNGVSWTVMISGYVLIEQHGRAWDMFRT 213
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M+ + + L S+L+A L H + K+GF ++ +G+ +++ Y K
Sbjct: 214 MLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVN 273
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
+ +K FE + + W+T+I+ SQ D A +++ + + P S + +
Sbjct: 274 MLDSAVKFFEGMAARNEYTWSTIIAALSQAGRI-DDAFAVYQR-DPLKSVPSRTSMLTGL 331
Query: 342 SACSNLSPS--LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+ + + L QIH N +S NA++ Y + +++A LF+RMP N
Sbjct: 332 ARYGRIDDAKILFDQIH--------EPNVVSW-NAMITGYMQNEMVDEAEDLFNRMPFRN 382
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
T+S MIAGYA++G +AL + + + P+ + S AC++ + G++ S
Sbjct: 383 TISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHS 442
Query: 460 M 460
+
Sbjct: 443 L 443
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
RS S +A + + G L +AR +FD MP + ++ NSMI Y +G+ L +
Sbjct: 29 RSPGTSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLAD 88
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
+ N+ I +LS A G+V + ++ F D G ++ M+ +
Sbjct: 89 AISGGNLRTGTI----LLSGYARAGRVRDARRVF----DGMGVR-NTVAWNAMVTCYVQN 139
Query: 485 GKLTDAERLIEAMP 498
G +T A +L +AMP
Sbjct: 140 GDITLARKLFDAMP 153
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 361/644 (56%), Gaps = 40/644 (6%)
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSLFKDM-RE 124
F L AAYAR + +A P + ++N L++A + G +AL +F+ +
Sbjct: 47 FPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSS 106
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
R D+ FTL+ A +L + + A G+ V ++LL YSR G + +A
Sbjct: 107 ARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAI 166
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
RVF M KD V+W++MV + +EAL ++ M + D + ++ A T
Sbjct: 167 RVFDGMPR-KDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLT 225
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ G H ++ G + I + L+D+YAK +G +VF +P + V WN +
Sbjct: 226 GNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAK-NGHFDVARQVFRMMPYRNAVSWNAL 284
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIK-I 362
ISG++Q ++D+AL F++++ G PD + V + AC+++ LGK IH ++ +
Sbjct: 285 ISGFAQNG-HADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRL 343
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
E + + A++ MYSKCG+LE AR+LF+++ + V N+MIA HG G +AL L
Sbjct: 344 EFQC---ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALAL 400
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F+ + ET I P + TF S+LSA +H+G V EG+ +F M FG EP +H C++DLL
Sbjct: 401 FQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLA 460
Query: 483 RAGKLTDAERLIEAM---PFNPGSIALKA--------------ANHFLQLEPSNAVPYVM 525
R+G + +A ++ +M P P +AL + A L+ +P + +
Sbjct: 461 RSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLAL 520
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
++N+YAA+ KW++V IR+LM+D G +K PG+S IEV H FV ED SHP +EI
Sbjct: 521 VSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKM 580
Query: 586 LEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
+ ++S +M++ GYVP KE+ L +HSE+LA+AFGLL+TS G ++++KN
Sbjct: 581 ISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKN 640
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH+AIK+IS I REI VRD RFH FKDG CSCGDYW
Sbjct: 641 LRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 44/310 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C + G S+H +L++ + ++ + +Y+K G A F + N
Sbjct: 218 VIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRN 277
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFK 120
S+N L++ +A+ A LF ++ QPD L+SA C D L L K
Sbjct: 278 AVSWNALISGFAQNGHADEALDLFREMSTSGLQPD---SGALVSALLACADV-GFLKLGK 333
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ GF L L + C+ + ++L YS+ G L
Sbjct: 334 SIH-------GFILRRL------------EFQCI-----------LGTAVLDMYSKCGSL 363
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+ A+++F ++ +D V WN+M+ G H G +AL LFQE+ + D T AS+L+A
Sbjct: 364 ESARKLFNKLSS-RDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSA 422
Query: 241 FTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPD 297
S LV G F + + G ++DL A+ SG + + ++ + +P
Sbjct: 423 L-SHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLAR-SGLVEEANEMLASMHTEPT 480
Query: 298 LVLWNTMISG 307
+ +W ++SG
Sbjct: 481 IPIWVALLSG 490
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/657 (35%), Positives = 351/657 (53%), Gaps = 67/657 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR+LFD+IP+P+L +NT+I Y+ + +SL+ +M + D +T L +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L +QLH + G + V+ +L+ Y G LD A+ VF ++ D ++WN
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF-DVCPKADVITWNM 210
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ AY + + E+ +LF M Q+ TL +L+A + L+DL G + H+++
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 270
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVF------------------------------- 290
N + + +ID+YA C G+M + +F
Sbjct: 271 VESNLVLENAMIDMYADC-GEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+++P+ D V W MI GY + + +AL F+ + PD+ + V V++AC++L
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFK-EALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 388
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG+ I + +I+ N + V NAL+ MY KCG+++ A +F M + + + +MI G
Sbjct: 389 ELGEWIRTYIDRNKIK-NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 447
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
A +G G +AL +F ML+ +I P IT++ VLSAC HTG V +G+KYF M G EP
Sbjct: 448 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEP 507
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHF 512
HY C++DLL RAG+L +A +IE MP SI A
Sbjct: 508 NIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 567
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+LEP N YV+L NIYAA +W ++ +R++M D+G++K PG S IE+ ++H FVA
Sbjct: 568 LELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAG 627
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLL 620
D SHP K I L++M++ +K AGY P DKE + HSEKLA+AFGL+
Sbjct: 628 DRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLI 687
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++ G I + KNLR+C DCHN K +S + RE+ VRD RFH FK G CSC DYW
Sbjct: 688 NSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 178/384 (46%), Gaps = 39/384 (10%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLT--CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
++Q+HC AI G + + N ++T C G A+R+F E+ E + WN+M+
Sbjct: 55 LQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE-PNLFIWNTMIRG 113
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + + L+ EM+ + D YT + FT L G Q H H++K G N
Sbjct: 114 YSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYN 173
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+ + L+ +Y C G + VF+ P+ D++ WN +IS Y++ ++ +++ F +
Sbjct: 174 VFVHTALVQMYLLC-GQLDTARGVFDVCPKADVITWNMIISAYNKVGKF-EESRRLFLVM 231
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
P + V V+SACS L GK++H+ ++ SN + + NA++ MY+ CG
Sbjct: 232 EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV-LENAMIDMYADCGE 290
Query: 385 LEDA-------------------------------RRLFDRMPEHNTVSLNSMIAGYAQH 413
++ A R FD+MPE + VS +MI GY +
Sbjct: 291 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 350
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
EAL LF M TN+ P T VSVL+ACAH G + G+ + D + +
Sbjct: 351 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE-WIRTYIDRNKIKNDLFV 409
Query: 474 YSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + G + AE + M
Sbjct: 410 RNALIDMYFKCGDVDKAESIFREM 433
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 182/390 (46%), Gaps = 38/390 (9%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H NVF L+ Y ++ +AR +FD P+ D++++N +ISAY G E
Sbjct: 164 HVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEE 223
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
+ LF M +K+ TL +++A S +L K++H C + + N+++
Sbjct: 224 SRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMID 283
Query: 173 CYSRNGFLDEAKRVFYEM------------------GEI------------KDEVSWNSM 202
Y+ G +D A +F M GEI KD VSW +M
Sbjct: 284 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 343
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ Y + EAL+LF+ M + + D +T+ S+LTA L L G ++ ++
Sbjct: 344 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 403
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ + + LID+Y KC GD+ +F E+ Q D W MI G + + ++AL F
Sbjct: 404 KNDLFVRNALIDMYFKC-GDVDKAESIFREMSQRDKFTWTAMIVGLAV-NGHGEKALDMF 461
Query: 323 KKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ + PD+ +++ V+SAC++ L K +T + I N I+ LV + +
Sbjct: 462 SNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN-IAHYGCLVDLLA 520
Query: 381 KCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
+ G L++A + + MP + N++ +++AG
Sbjct: 521 RAGRLKEAYEVIENMPIKANSIVWGALLAG 550
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 173/341 (50%), Gaps = 15/341 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C +DL TGK +H+ Y+KN V + L N I +Y+ CG + +A F
Sbjct: 242 TLVLVLSACSKLKDLRTGKKVHS-YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRS 300
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ ++ S+ +++ + I AR FD++P+ D VS+ +I Y + AL LF
Sbjct: 301 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 360
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSR 176
++M+ D FT+ ++TA + +L ++ + Y + + V N+L+ Y +
Sbjct: 361 RNMQATNVKPDEFTMVSVLTACA-HLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 419
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D+A+ +F EM + +D+ +W +M+V + G +AL +F M+ + D T
Sbjct: 420 CGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIG 478
Query: 237 ILTAFTSLEDLVGGLQFHAHLI-KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L+A T + G ++ + + G N +H G L+DL A+ +G +++ +V E +P
Sbjct: 479 VLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC-LVDLLAR-AGRLKEAYEVIENMP 536
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+ + ++W +++G E SD A K++ + PD+
Sbjct: 537 IKANSIVWGALLAGCRVYRE-SDMAEMVVKQI--LELEPDN 574
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 90/223 (40%), Gaps = 22/223 (9%)
Query: 330 YHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALV-AMYSKCGNLEDA 388
+ P + ++ C ++ +Q+H IK + +N + N + + G+ + A
Sbjct: 35 FSPPTHPLISLLETCESMDQL--QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 92
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RRLFD +PE N N+MI GY++ + L+ ML + P TF +
Sbjct: 93 RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 152
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ G++ + G + ++ ++ + G+L A + + P
Sbjct: 153 IALEYGRQLHGHVLK-HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP---------- 201
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
++ + + M+ + Y GK+EE + +M D+ V
Sbjct: 202 --------KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQV 236
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/661 (34%), Positives = 349/661 (52%), Gaps = 78/661 (11%)
Query: 90 QIPQPDLVS-------YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
QIP D S +N +I++Y +AL+++ +R+ F+ D F ++ A
Sbjct: 76 QIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACG 135
Query: 143 NN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
L K++H + G D V N+L+ Y ++ A+ VF +M E +D VSW+
Sbjct: 136 QVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME-RDVVSWS 194
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ + +++E AL+L +EM +Q+ + S++ F ++ G HA++I++
Sbjct: 195 TMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRN 254
Query: 261 GFHQNSHIG----SGLIDLYAKC------------------------------SGDMRDC 286
N H+G + L+D+YAKC S + +
Sbjct: 255 S--NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEA 312
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+F+ D+++W M+S Y+Q DQA F ++ G P + V ++S C+
Sbjct: 313 RALFDSTQNRDVMIWTAMLSAYAQAN-CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 371
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
LGK +H+ K + + I +N ALV MY+KCG++ A RLF + N+
Sbjct: 372 AGALDLGKWVHSYIDKERVEVDCI-LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 430
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+I G+A HG G EAL +F M + P +ITF+ +L AC+H G V EG+K F M F
Sbjct: 431 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 490
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------A 508
G P+ EHY CM+DLLGRAG L +A +I++MP P +I A
Sbjct: 491 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 550
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A L++EP N V+++NIYAA+ +W + A +R+ M+ G++K+PG S IEV +H
Sbjct: 551 ATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHE 610
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D SHP I+ I+ L EM RK+ +AGYVPD KE L +HSEKLA+A
Sbjct: 611 FLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMA 670
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL+ST+ PI ++KNLR+C DCH A K +S I GR I VRD RFH F++G CSCGDY
Sbjct: 671 FGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 730
Query: 677 W 677
W
Sbjct: 731 W 731
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 27/375 (7%)
Query: 18 GKSLHALYLKNL------VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVL 71
GK++HA ++N VP + L + +Y+KCG L A FN V S+ +
Sbjct: 244 GKAMHAYVIRNSNNEHMGVPTTTALLD----MYAKCGHLGLARQLFNGLTQKTVVSWTAM 299
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
+A R R+ AR LFD D++ + ++SAYA + A +LF MR
Sbjct: 300 IAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 359
Query: 132 FTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
T+ L++ A + L L K +H + +N +L+ Y++ G ++ A R+F E
Sbjct: 360 VTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 419
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
+D WN+++ + H G EAL +F EM + + T +L A + +
Sbjct: 420 AIS-RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 478
Query: 250 GLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
G + ++ + Q H G ++DL + +G + + ++ + +P +P+ ++W +++
Sbjct: 479 GKKLFEKMVHTFGLVPQIEHYGC-MVDLLGR-AGLLDEAHEMIKSMPIKPNTIVWGALVA 536
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS----ACSNLSPSLG--KQIHALTI 360
+ + LG + P++C + ++S A + S + G K + + +
Sbjct: 537 ACRL---HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 593
Query: 361 KIEIRSNRISVNNAL 375
K E + I VN +
Sbjct: 594 KKEPGHSVIEVNGTV 608
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HAH+IK+ FH I L D + S + WN +I+ Y+++
Sbjct: 61 QIHAHIIKTHFHHALQI--PLNDFPSGLSPSAQ----------------WNFVITSYTKR 102
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRIS 370
+ + AL + +L ++ + D+ V+ AC +S LGK+IH +K + + +
Sbjct: 103 NQPRN-ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRD-VF 160
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V NAL+ MY +C +E AR +FD+M E + VS ++MI +++ AL L M
Sbjct: 161 VGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ 220
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG-EHYSCMIDLLGRAGKLTD 489
+ P+ + VS+++ A T + G+ + + E G + ++D+ + G L
Sbjct: 221 VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGL 280
Query: 490 AERLIEAM 497
A +L +
Sbjct: 281 ARQLFNGL 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 89/231 (38%), Gaps = 46/231 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H+ K V L+ + +Y+KCG ++AA F
Sbjct: 361 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF--- 417
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A +R D+ +N +I+ +A G E AL +F
Sbjct: 418 -----------IEAISR-----------------DICMWNAIITGFAMHGYGEEALDIFA 449
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTC 173
+M + + T GL+ A S+ + K +H + +HY + + L
Sbjct: 450 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL--- 506
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG----LEALQLFQ 220
R G LDEA + M + + W ++V A H+ L A QL +
Sbjct: 507 -GRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE 556
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/656 (36%), Positives = 354/656 (53%), Gaps = 79/656 (12%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDT 112
H ++ F N ++ YAR I AR++FD+IP + + +N ++S Y
Sbjct: 120 HVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESE 179
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A LF M E+ T + ++T YA V +
Sbjct: 180 GQAQWLFDVMPERNV----ITWTAMVTG----------------------YAKVKD---- 209
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
L+ A+R F M E + VSWN+M+ Y Q+ EAL+LF EMV+ + D
Sbjct: 210 -------LEAARRYFDCMPE-RSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDET 261
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T ++++A +S D L + N + + L+D+YAK GD+ K+F
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKF-GDLDSARKLFNT 320
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-S 350
+P ++V WN+MI+GY+Q + S A+ FK++ PD+ + V VISAC +L
Sbjct: 321 MPGRNVVTWNSMIAGYAQNGQ-SAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALE 379
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LG + + +I+ + IS +NA++ MYS+CG++EDA+R+F M + VS N++I+G+
Sbjct: 380 LGNWVVRFLTENQIKLS-ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 438
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A HG G+EA+ L M E I P +TF+ VL+AC+H G + EG+K F +KD P
Sbjct: 439 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PA 493
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GS------------IALKAANHFL 513
+HY+CM+DLLGR G+L DA+R +E MP P GS + AAN
Sbjct: 494 IDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLF 553
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+LEP N+ +++L+NIYA++G+W++V IR M+ GV+K G+SW+E ++H F+ D
Sbjct: 554 ELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVAD 613
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLS 621
SH +I+ L E+ +KM++AGY+ DK L HSEKLA+ + LL
Sbjct: 614 RSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLV 673
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G I V+KNLR+C DCH AIK IS + GR I VRD RFHCF DG CSC DYW
Sbjct: 674 SEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 218/474 (45%), Gaps = 77/474 (16%)
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC 146
LF+ P++ + +++ Y+ D + +++ M+ D F LI ++
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS-WNSMVVA 205
H + G A V N+++ Y+R G + A++VF E+ + + +V+ WN+MV
Sbjct: 116 ---GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG 172
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + +A LF M ++ T +++T + ++DL ++
Sbjct: 173 YWKWESEGQAQWLFDVMPE----RNVITWTAMVTGYAKVKDLEAARRYF----------- 217
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
DCM P+ +V WN M+SGY+Q +++AL F ++
Sbjct: 218 -------------------DCM------PERSVVSWNAMLSGYAQN-GLAEEALRLFDEM 251
Query: 326 NRVGYHPDDCSFVCVISACSN-----LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
G PD+ ++V VISACS+ L+ SL + +H I++ V AL+ MY+
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLN-----CFVRTALLDMYA 306
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET-NIPPTNITFV 439
K G+L+ AR+LF+ MP N V+ NSMIAGYAQ+G A+ LF+ M+ + P +T V
Sbjct: 307 KFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMV 366
Query: 440 SVLSACAHTGKVAEGQKYFSMM-KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
SV+SAC H G + G + ++ G ++ MI + R G + DA+R+
Sbjct: 367 SVISACGHLGALELGNWVVRFLTENQIKLSISG--HNAMIFMYSRCGSMEDAKRV----- 419
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
F ++ + V Y L + +AA G E + M++ G++
Sbjct: 420 -------------FQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 460
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 58/306 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+ C R D SL + + + ++ + +Y+K G L +A FN
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTM 321
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-----QPDLVSYNTLISAYADCGDTESA 115
NV ++N ++A YA+ + A A +LF ++ PD V+ ++ISA G E
Sbjct: 322 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 381
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ + + E + ++SG +N+++ YS
Sbjct: 382 NWVVRFLTENQIK---LSISG------------------------------HNAMIFMYS 408
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
R G +++AKRVF EM +D VS+N+++ + H G+EA+ L M + D T
Sbjct: 409 RCGSMEDAKRVFQEMA-TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 467
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-------SGDMRDCMK 288
+LTA + HA L++ G I ID YA C G++ D +
Sbjct: 468 GVLTACS-----------HAGLLEEGRKVFESIKDPAIDHYA-CMVDLLGRVGELEDAKR 515
Query: 289 VFEEIP 294
E +P
Sbjct: 516 TMERMP 521
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 81/336 (24%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
L++ ++AS + F L Q HA +I + H +++ + LI+ +
Sbjct: 2 LELGSIASRVGNFNHLR------QLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHL 55
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F P++ ++ +M+ YS ++++ L ++++ G PD +FV I S +
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVL-MYEQMQGCGVRPD--AFVYPILIKSAGT 112
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR------------------ 390
+G HA +K+ S+ V NA++ MY++ G + AR+
Sbjct: 113 GGIG--FHAHVLKLGHGSDAF-VRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 391 ---------------LFDRMPEHN-------------------------------TVSLN 404
LFD MPE N VS N
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+M++GYAQ+G+ EALRLF+ M+ I P T+V+V+SAC+ G S+++ +
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAA---SLVRTL 286
Query: 465 FGFEPEGEHY--SCMIDLLGRAGKLTDAERLIEAMP 498
+ + + ++D+ + G L A +L MP
Sbjct: 287 HQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMP 322
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/657 (36%), Positives = 361/657 (54%), Gaps = 65/657 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ I +P+L+ +NT+ +A D SAL L+ M + +T L+ A
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + G+D V+ SL++ Y +NG L++A++VF
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ IKD VSWN+M+ Y + EAL+LF+EM+ + D
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ S+++A + G Q H+ + GF N I + LIDLY KC G++ +FE
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC-GEVETACGLFE 294
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 295 GLSYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIE 353
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + +++ +N S +L+ MY+KCG++E A+++FD + + S N+MI G
Sbjct: 354 IGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 413
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG A +F M + I P +ITFV +LSAC+H+G + G+ F MK+ + P
Sbjct: 414 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITP 473
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDLLG +G +AE +I M P + LKA A +
Sbjct: 474 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNL 533
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N YV+L+NIYA +G+W EVA IR L+ D+G++K PG S IE+ +H F+
Sbjct: 534 IKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFGL+
Sbjct: 594 DKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 653
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 654 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 143/281 (50%), Gaps = 37/281 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S LI+ + + + + VFE I +P+L++WNTM G++
Sbjct: 21 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F ++ +C+ G+QIH +K+ + +
Sbjct: 81 SSD-PVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD-L 138
Query: 370 SVNNALVAMYSKCGNLEDARRLFDR-------------------------------MPEH 398
V+ +L++MY + G LEDAR++FD+ +P
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+MI+GYA+ G EAL LF+ M++TN+ P T VSV+SACA + + G++
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S + D GF + + +IDL + G++ A L E + +
Sbjct: 259 SWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 298
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ YA+ I +A+Q+FD I L S+N +I +A G +A +F MR+ + D
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 438
Query: 131 GFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
T GL++A S++ L H I +HY ++ +G EA
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYG----CMIDLLGHSGLFKEA 494
Query: 184 KRVFYEMGEIKDEVSWNSMVVA 205
+ + M D V W S++ A
Sbjct: 495 EEMINTMEMEPDGVIWCSLLKA 516
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/657 (36%), Positives = 361/657 (54%), Gaps = 65/657 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ I +P+L+ +NT+ +A D SAL L+ M + +T L+ A
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + G+D V+ SL++ Y +NG L++A++VF
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ IKD VSWN+M+ Y + EAL+LF+EM+ + D
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ S+++A + G Q H+ + GF N I + LIDLY KC G++ +FE
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC-GEVETACGLFE 279
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 280 GLSYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIE 338
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + +++ +N S +L+ MY+KCG++E A+++FD + + S N+MI G
Sbjct: 339 IGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 398
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG A +F M + I P +ITFV +LSAC+H+G + G+ F MK+ + P
Sbjct: 399 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITP 458
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDLLG +G +AE +I M P + LKA A +
Sbjct: 459 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNL 518
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N YV+L+NIYA +G+W EVA IR L+ D+G++K PG S IE+ +H F+
Sbjct: 519 IKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 578
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFGL+
Sbjct: 579 DKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 638
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 639 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 143/281 (50%), Gaps = 37/281 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S LI+ + + + + VFE I +P+L++WNTM G++
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F ++ +C+ G+QIH +K+ + +
Sbjct: 66 SSD-PVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD-L 123
Query: 370 SVNNALVAMYSKCGNLEDARRLFDR-------------------------------MPEH 398
V+ +L++MY + G LEDAR++FD+ +P
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+MI+GYA+ G EAL LF+ M++TN+ P T VSV+SACA + + G++
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S + D GF + + +IDL + G++ A L E + +
Sbjct: 244 SWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 283
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/657 (35%), Positives = 351/657 (53%), Gaps = 67/657 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR+LFD+IP+P+L +NT+I Y+ + +SL+ +M + D +T L +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L +QLH + G + V+ +L+ Y G LD A+ VF ++ D ++WN
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF-DVCPKADVITWNM 189
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ AY + + E+ +LF M Q+ TL +L+A + L+DL G + H+++
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 249
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVF------------------------------- 290
N + + +ID+YA C G+M + +F
Sbjct: 250 VESNLVLENAMIDMYADC-GEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+++P+ D V W MI GY + + +AL F+ + PD+ + V V++AC++L
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFK-EALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 367
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LG+ I + +I+ N + V NAL+ MY KCG+++ A +F M + + + +MI G
Sbjct: 368 ELGEWIRTYIDRNKIK-NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 426
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
A +G G +AL +F ML+ +I P IT++ VLSAC HTG V +G+KYF M G EP
Sbjct: 427 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEP 486
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHF 512
HY C++DLL RAG+L +A +IE MP SI A
Sbjct: 487 NIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 546
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+LEP N YV+L NIYAA +W ++ +R++M D+G++K PG S IE+ ++H FVA
Sbjct: 547 LELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAG 606
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLL 620
D SHP K I L++M++ +K AGY P DKE + HSEKLA+AFGL+
Sbjct: 607 DRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLI 666
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++ G I + KNLR+C DCHN K +S + RE+ VRD RFH FK G CSC DYW
Sbjct: 667 NSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 178/384 (46%), Gaps = 39/384 (10%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLT--CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
++Q+HC AI G + + N ++T C G A+R+F E+ E + WN+M+
Sbjct: 34 LQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE-PNLFIWNTMIRG 92
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + + L+ EM+ + D YT + FT L G Q H H++K G N
Sbjct: 93 YSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYN 152
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+ + L+ +Y C G + VF+ P+ D++ WN +IS Y++ ++ +++ F +
Sbjct: 153 VFVHTALVQMYLLC-GQLDTARGVFDVCPKADVITWNMIISAYNKVGKF-EESRRLFLVM 210
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
P + V V+SACS L GK++H+ ++ SN + + NA++ MY+ CG
Sbjct: 211 EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV-LENAMIDMYADCGE 269
Query: 385 LEDA-------------------------------RRLFDRMPEHNTVSLNSMIAGYAQH 413
++ A R FD+MPE + VS +MI GY +
Sbjct: 270 MDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 329
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
EAL LF M TN+ P T VSVL+ACAH G + G+ + D + +
Sbjct: 330 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE-WIRTYIDRNKIKNDLFV 388
Query: 474 YSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + G + AE + M
Sbjct: 389 RNALIDMYFKCGDVDKAESIFREM 412
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 182/390 (46%), Gaps = 38/390 (9%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H NVF L+ Y ++ +AR +FD P+ D++++N +ISAY G E
Sbjct: 143 HVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEE 202
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
+ LF M +K+ TL +++A S +L K++H C + + N+++
Sbjct: 203 SRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMID 262
Query: 173 CYSRNGFLDEAKRVFYEM------------------GEI------------KDEVSWNSM 202
Y+ G +D A +F M GEI KD VSW +M
Sbjct: 263 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 322
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ Y + EAL+LF+ M + + D +T+ S+LTA L L G ++ ++
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 382
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ + + LID+Y KC GD+ +F E+ Q D W MI G + + ++AL F
Sbjct: 383 KNDLFVRNALIDMYFKC-GDVDKAESIFREMSQRDKFTWTAMIVGLAVN-GHGEKALDMF 440
Query: 323 KKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+ + PD+ +++ V+SAC++ L K +T + I N I+ LV + +
Sbjct: 441 SNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN-IAHYGCLVDLLA 499
Query: 381 KCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
+ G L++A + + MP + N++ +++AG
Sbjct: 500 RAGRLKEAYEVIENMPIKANSIVWGALLAG 529
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 173/341 (50%), Gaps = 15/341 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C +DL TGK +H+ Y+KN V + L N I +Y+ CG + +A F
Sbjct: 221 TLVLVLSACSKLKDLRTGKKVHS-YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRS 279
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ ++ S+ +++ + I AR FD++P+ D VS+ +I Y + AL LF
Sbjct: 280 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 339
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSR 176
++M+ D FT+ ++TA + +L ++ + Y + + V N+L+ Y +
Sbjct: 340 RNMQATNVKPDEFTMVSVLTACA-HLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 398
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D+A+ +F EM + +D+ +W +M+V + G +AL +F M+ + D T
Sbjct: 399 CGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIG 457
Query: 237 ILTAFTSLEDLVGGLQFHAHLI-KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L+A T + G ++ + + G N +H G L+DL A+ +G +++ +V E +P
Sbjct: 458 VLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC-LVDLLAR-AGRLKEAYEVIENMP 515
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+ + ++W +++G E SD A K++ + PD+
Sbjct: 516 IKANSIVWGALLAGCRVYRE-SDMAEMVVKQI--LELEPDN 553
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 91/223 (40%), Gaps = 22/223 (9%)
Query: 330 YHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYS-KCGNLEDA 388
+ P + ++ C ++ +Q+H IK + +N + N + + + G+ + A
Sbjct: 14 FSPPTHPLISLLETCESMDQL--QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 71
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RRLFD +PE N N+MI GY++ + L+ ML + P TF +
Sbjct: 72 RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 131
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ G++ + G + ++ ++ + G+L A + + P
Sbjct: 132 IALEYGRQLHGHVLK-HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP---------- 180
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
++ + + M+ + Y GK+EE + +M D+ V
Sbjct: 181 --------KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQV 215
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/568 (38%), Positives = 334/568 (58%), Gaps = 35/568 (6%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A S NL +++H F+ A ++NSL+ Y + G + EA +VF +M + KD VSW
Sbjct: 62 AQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRK-KDMVSW 120
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
S++ Y Q+ EA+ L M+ + + +T AS+L A + D G Q HA +K
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVK 180
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+H++ ++GS L+D+YA+C G M VF+++ + V WN +ISG+++K + + AL
Sbjct: 181 CDWHEDVYVGSALLDMYARC-GKMDMATAVFDKLDSKNGVSWNALISGFARKGD-GETAL 238
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ R G+ ++ + S + + GK +HA +K + V N ++ M
Sbjct: 239 MVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAF-VGNTMLDM 297
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+K G++ DAR++F+R+ + V+ NSM+ +AQ+G+G EA+ FE M ++ I ITF
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITF 357
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +L+AC+H G V EG+ YF M+K+ + EPE EHY ++DLLGRAG L A I MP
Sbjct: 358 LCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416
Query: 499 FNP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + AA+H QL+P ++ P V+L NIYA++G W+ A
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAAR 476
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
+R++M+ GV+K+P SW+E+ +H+FVA D +HP +EI+ +E+S K+++ GYVPD
Sbjct: 477 VRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+E L +HSEK+A+AF L+ G I +MKN+RICGDCH+A K+IS
Sbjct: 537 MDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISK 596
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ REI VRDT RFH F +G CSCGDYW
Sbjct: 597 VFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 34/274 (12%)
Query: 12 RRDLVTGKSLHALYLKNLVPFSA-----------YLSNHFILL--------YSKCGCLSA 52
++D+V+ SL A Y +N +P A + N F Y+ G
Sbjct: 114 KKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQ 173
Query: 53 AHH-AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H A H +V+ + LL YAR ++ A +FD++ + VS+N LIS +A GD
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
E+AL +F +M+ F+ FT S + + A L K +H + A V N+
Sbjct: 234 GETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNT 293
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+L Y+++G + +A++VF E KD V+WNSM+ A+ Q+ G EA+ F+EM + L
Sbjct: 294 MLDMYAKSGSMIDARKVF-ERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ T ILTA + H L+K G H
Sbjct: 353 NQITFLCILTACS-----------HGGLVKEGKH 375
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/644 (34%), Positives = 357/644 (55%), Gaps = 37/644 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NV N LL Y+ R A +F + + DL+S+N++++ Y G L + ++
Sbjct: 431 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 490
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + T + + A SN CLI K +H L I GF + V N+L+T Y + G +
Sbjct: 491 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 550
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EAK+V M + D V+WN+++ + ++ E EA++ ++ + + + T+ S+L A
Sbjct: 551 MEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 609
Query: 241 FTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
++ +DL+ G+ HAH++ +GF + ++ + LI +YAKC GD+ +F+ + +
Sbjct: 610 CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKC-GDLNSSNYIFDGLGNKSPI 668
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN M++ + ++AL F ++ VG + D SF ++A +NL+ G+Q+H L
Sbjct: 669 TWNAMVAANAH-HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGL 727
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK+ S+ + V NA + MY KCG + D ++ + + +S N +I+ +A+HG +
Sbjct: 728 VIKLGFESD-LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQK 786
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A F ML+ P ++TFVS+LSAC H G V EG Y+ M FG P EH C+I
Sbjct: 787 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 846
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAV 521
DLLGR+G+L+ AE I+ MP P +A K A H L+L+PS+
Sbjct: 847 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 906
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+ +N+ A SGKWE+V +R+ M ++K+P SW+++K ++H F + HP
Sbjct: 907 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 966
Query: 582 IHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
I L E+ + K+AGYVPD KE L +HSE+LA+AFGL++T +
Sbjct: 967 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1026
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
+ KNLR+CGDCH+ KF+S I GR+I +RD YRFH F G+CSC
Sbjct: 1027 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 239/477 (50%), Gaps = 14/477 (2%)
Query: 53 AHHAFNQTQHAN--VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCG 110
A HAF N +F N L+ Y++ I AR +FD++ + S++T++S Y G
Sbjct: 115 ALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVG 174
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYASVN 167
E A+ LF M + +GF ++ LITA S + + Q+H + G V
Sbjct: 175 LYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVG 234
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+L+ Y G + A+++F EM + + VSW S++V Y E L ++Q M +
Sbjct: 235 TALVHFYGSIGLVYNAQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 293
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T A++ ++ LED V G Q H+I+ GF + + + LI +++ S C
Sbjct: 294 SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACY 353
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+ + + D++ WN MIS Y+ ++L CF + + + + ++S CS++
Sbjct: 354 -VFDHMNECDIISWNAMISAYAH-HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 411
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+ IH L +K+ + SN + + N L+ +YS+ G EDA +F M E + +S NSM
Sbjct: 412 DNLKWGRGIHGLVVKLGLDSN-VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+A Y Q G ++ L++ +L+ ++TF S L+AC++ + E + +++ + G
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII-VAG 529
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA--ANHFLQLEPSNAV 521
F + ++ + G+ G + +A+++++ MP P + A H EP+ AV
Sbjct: 530 FHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHAENEEPNEAV 585
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 185/353 (52%), Gaps = 11/353 (3%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K LH I + N+L+ YS+ G ++ A+ VF EM ++E SW++M+ Y
Sbjct: 114 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH-RNEASWSTMLSGYV- 171
Query: 209 HREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG-GLQFHAHLIKSGFHQN 265
R GL EA+ LF +M L + + + +AS++TA + + G Q H ++K+G +
Sbjct: 172 -RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 230
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
++G+ L+ Y G + + K+FEE+P ++V W +++ GYS + L ++++
Sbjct: 231 VYVGTALVHFYGSI-GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN-PGEVLNVYQRM 288
Query: 326 NRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
+ G + +F V S+C L LG Q+ I+ + +SV N+L++M+S +
Sbjct: 289 RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE-DSVSVANSLISMFSSFSS 347
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E+A +FD M E + +S N+MI+ YA HG+ E+LR F WM + + T S+LS
Sbjct: 348 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 407
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
C+ + G+ ++ + G + + ++ L AG+ DAE + +AM
Sbjct: 408 CSSVDNLKWGRGIHGLVVKL-GLDSNVCICNTLLTLYSEAGRSEDAELVFQAM 459
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ LH L +K +++N + +Y KCG + Q + + S+N+L++A
Sbjct: 718 LEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISA 777
Query: 75 YARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
+AR AR+ F ++ P+PD V++ +L+SA G + L+ + M +
Sbjct: 778 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE----- 832
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
++ G +H + + L R+G L A+ EM
Sbjct: 833 -----------------------FGVFPGIEHCVCIIDLL----GRSGRLSHAEGFIKEM 865
Query: 191 GEIKDEVSWNSMVVA 205
++++W S++ A
Sbjct: 866 PVPPNDLAWRSLLAA 880
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 251/707 (35%), Positives = 387/707 (54%), Gaps = 66/707 (9%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+L T + R L +H + N +L N+ I LY+KCGCL+ A F+ T H
Sbjct: 147 HLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH 206
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F I V++ +LI+ + ALSLF MR
Sbjct: 207 ------------------------FKTI-----VTWTSLITHLSHFNMHLQALSLFNQMR 237
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ FT S +++AS+ + ++ +QLH L GFD V +L+ Y++ +
Sbjct: 238 CSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMH 297
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASILTA 240
A RVF +M E ++ VSWNSM+V + + A+ +F++++ + + + +++S+L+A
Sbjct: 298 SAVRVFDQMPE-RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
++ L G Q H ++K G +++ + L+D+Y KC + +K+F+ + D+V
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF-FDEGVKLFQCVGDRDVVT 415
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WN ++ G+ Q +++ ++A F + R G PD+ SF V+ + ++L+ G IH
Sbjct: 416 WNVLVMGFVQNDKF-EEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI 474
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK+ N + + +L+ MY+KCG+L DA ++F+ + +HN +S +MI+ Y HG +
Sbjct: 475 IKLGYVKN-MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 533
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ LFE ML I P+++TFV VLSAC+HTG+V EG +F+ MK + P EHY+CM+D
Sbjct: 534 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 593
Query: 480 LLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVP 522
LLGRAG L +A+R IE+MP P G++ + +AA ++EP N
Sbjct: 594 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 653
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+LAN+ SG+ EE +RRLM GV+K+PG SWI+VK VF A D SH EI
Sbjct: 654 YVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEI 713
Query: 583 HNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ LE++ + +K+ GYV ++E+ L +HSEKLA+AFGLL+ PI +
Sbjct: 714 YKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRI 773
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR CG CH +K S I REI VRD RFH F DG CSCGDYW
Sbjct: 774 KKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 220/471 (46%), Gaps = 50/471 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L ++ G+ LH+L K+ + ++ + +Y+KC + +A F+Q
Sbjct: 247 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQ- 305
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P+ +LVS+N++I + + A+ +FK
Sbjct: 306 ------------------------------MPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335
Query: 121 D-MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
D +REK + ++S +++A +N L +Q+H + + G V NSL+ Y +
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
F DE ++F +G+ +D V+WN +V+ + Q+ + EA F M + D + +++
Sbjct: 396 RFFDEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + SL L G H +IK G+ +N I LI +YAKC G + D +VFE I +
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKC-GSLVDAYQVFEGIEDHN 513
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
++ W MIS Y Q ++Q + F+ + G P +FVCV+SACS+ H
Sbjct: 514 VISWTAMISAY-QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHF 572
Query: 358 LTIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG----YAQ 412
++K N + A +V + + G L++A+R + MP T S+ + G Y
Sbjct: 573 NSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGN 632
Query: 413 HGIGMEAL-RLFEWMLETNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMM 461
+G EA RLFE + P N +V + + C +G++ E + +M
Sbjct: 633 LKMGREAAERLFE------MEPYNPGNYVLLANMCTRSGRLEEANEVRRLM 677
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L +L L Q H +I + + + + LI+LYAKC G + + +F
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKC-GCLNQALLLFSIT 203
Query: 294 PQ--PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+V W ++I+ S + QAL F ++ G +P+ +F ++SA + L
Sbjct: 204 HHHFKTIVTWTSLITHLSHFNMHL-QALSLFNQMRCSGPYPNQFTFSSILSASAATMMVL 262
Query: 352 -GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+Q+H+L K +N I V ALV MY+KC ++ A R+FD+MPE N VS NSMI G+
Sbjct: 263 HGQQLHSLIHKHGFDAN-IFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGF 321
Query: 411 AQHGIGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + A+ +F+ +L E + P ++ SVLSACA+ G + G++
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQ 368
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 372/711 (52%), Gaps = 70/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C G ++ G +H L +K + ++N + +YSKCG L+ A +F +
Sbjct: 250 TVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKN 309
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT+ISA++ GD A +L +
Sbjct: 310 NNKNV-------------------------------VSWNTMISAFSLEGDVNEAFNLLQ 338
Query: 121 DMR--EKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M+ + + T+ ++ A + L L +K+LH + F H ++N+ + Y++
Sbjct: 339 EMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAK 397
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+ A++VF+ +G+ K SWN+++ + Q+ + +AL L +M D +T++S
Sbjct: 398 CGALNSAEKVFHGIGD-KTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISS 456
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A L+ L G + H +++++G + +G+ L+ Y C G +F+ +
Sbjct: 457 LLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHC-GKASSARVLFDRMKDK 515
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+LV WN MISGYSQ ++L F+K G + + V V ACS LS LGK+
Sbjct: 516 NLVSWNAMISGYSQNG-LPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K +++ V +++ MY+K G ++++R++FD + + N S N++I + HG
Sbjct: 575 HGYVLK-ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGH 633
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EA+ L+E M + P T++ +L AC H G V EG KYF M++ EP+ EHY+
Sbjct: 634 GKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYA 693
Query: 476 CMIDLLGRAGKLTDAERLIEAMP-----------------FNPGSIALKAANHFLQLEPS 518
C+ID+L RAG+L DA RL+ MP F I K A L+LEP
Sbjct: 694 CLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPD 753
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
A YV+L+N+YA GKW+ V +R++M++ G+QK G SWIEV +++ FV D P
Sbjct: 754 KAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPK 813
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
EI + ++ + GY P +K L HSEKLA++FGLL T+ G
Sbjct: 814 SAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGT 873
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLRIC DCHNA K IS REI VRD RFH F+DG CSC DYW
Sbjct: 874 TLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 241/504 (47%), Gaps = 45/504 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C G D+ G+ +H + +K + ++ N + +Y KCG
Sbjct: 148 TFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGA----------- 196
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A ++FD +P+ +LVS+N++I A+++ G + + L
Sbjct: 197 --------------------VDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLM 236
Query: 121 DM-REKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M E+ D T+ + + A + + +H LA+ G VNN+++ YS+
Sbjct: 237 EMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKC 296
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM--VSLQLGLDMYTLA 235
G+L+EA+ F + K+ VSWN+M+ A+ + EA L QEM ++ + T+
Sbjct: 297 GYLNEAQMSFVKNNN-KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTIL 355
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L A L + H + + F Q+ + + I YAKC G + KVF I
Sbjct: 356 NVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKC-GALNSAEKVFHGIGD 413
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
+ WN +I G++Q + +AL ++ G PD + ++ AC++L S GK+
Sbjct: 414 KTVSSWNALIGGHAQNGD-PRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKE 472
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH ++ + ++ V +L++ Y CG AR LFDRM + N VS N+MI+GY+Q+G
Sbjct: 473 IHGYVLRNGLETD-FFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNG 531
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ E+L LF L I I VSV AC+ + G++ + + + E
Sbjct: 532 LPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV--LKALQTEDAFV 589
Query: 475 SC-MIDLLGRAGKLTDAERLIEAM 497
C +ID+ ++G + ++ ++ + +
Sbjct: 590 GCSIIDMYAKSGCIKESRKVFDGL 613
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 216/460 (46%), Gaps = 44/460 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ C ++D+ TG+ LH V S + N ++L T+
Sbjct: 49 LLQACGNQKDIETGRRLH-----KFVSDSTHYRNDYVL----------------NTR--- 84
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-R 123
L+ YA +R +FD + +L+ +N L+S Y G + +F D+
Sbjct: 85 ------LIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVS 138
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F D FT +I A ++ L + +H + I G V N+L+ Y + G +D
Sbjct: 139 DTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVD 198
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLASILT 239
EA +VF M E + VSWNSM+ A+ ++ ++ L EM+ + GL D+ T+ +IL
Sbjct: 199 EAMKVFDFMPE-TNLVSWNSMICAFSENGFSRDSFDLLMEMLG-EEGLLPDVVTVVTILP 256
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
++ G+ H +K G + + + ++ +Y+KC G + + F + ++V
Sbjct: 257 VCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKC-GYLNEAQMSFVKNNNKNVV 315
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVG--YHPDDCSFVCVISAC-SNLSPSLGKQIH 356
WNTMIS +S + + ++A +++ G ++ + + V+ AC L K++H
Sbjct: 316 SWNTMISAFSLEGDV-NEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELH 374
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ + + + ++NA + Y+KCG L A ++F + + S N++I G+AQ+G
Sbjct: 375 GYSFRHCFQ--HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDP 432
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+AL L M + P T S+L ACAH + G++
Sbjct: 433 RKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKE 472
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 136/258 (52%), Gaps = 6/258 (2%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+L A + +D+ G + H + S ++N ++ + LI +YA C G D VF+ +
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMC-GSPLDSRLVFDNMET 107
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQ 354
+L+ WN ++SGY++ Y D ++ + PD+ +F VI AC L LG+
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH + IK+ + + + V NALV MY KCG +++A ++FD MPE N VS NSMI ++++G
Sbjct: 168 IHGMVIKMGLVLD-VFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENG 226
Query: 415 IGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
++ L ML E + P +T V++L CA G+V G + + G E
Sbjct: 227 FSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKL-GLSEEVMV 285
Query: 474 YSCMIDLLGRAGKLTDAE 491
+ M+ + + G L +A+
Sbjct: 286 NNAMVYMYSKCGYLNEAQ 303
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/699 (33%), Positives = 356/699 (50%), Gaps = 98/699 (14%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
+A+ R+A AR +F ++P+ D VS+ ++ G A+ DM F FTL
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 135 SGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM-- 190
+ +++ A + + +++H + G V NS+L Y + G + A VF M
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 191 ----------------GEI------------KDEVSWNSMVVAYGQHREGLEALQLFQEM 222
G + + VSWN+M+ Y Q+ +AL+LF M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 223 V-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS- 280
+ + D +T+ S+L+A +L ++ G Q HA+++++ NS + + LI YAK
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 281 -------------------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
GDM ++F + D+V W MI GY
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNR 368
Q +D+A+ F+ + G P+ + V+S C++L+ GKQIH I+ + +
Sbjct: 302 QNGR-NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
SV+NA++ MY++ G+ ARR+FD++ T++ SMI AQHG G EA+ LFE ML
Sbjct: 361 -SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P IT+V VLSAC+H G V EG++Y+ +K+ PE HY+CM+DLL RAG
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
++A+ I MP P +IA AA L ++P+N+ Y +AN+Y
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
+A G+W + A I + +++ V+K+ GFSW ++ ++HVF A+D HP ++ M
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 599
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++K AG+VPD KE+ L HSEKLA+AFGL+ST + VMKNLR+C
Sbjct: 600 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH AIK IS + REI VRD RFH F+DG CSC DYW
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 39/255 (15%)
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
++AK SG + D VF E+P+ D V W M+ G ++ + +A+ + G+ P
Sbjct: 1 MFAK-SGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG-EAIKTLLDMTADGFTPTQ 58
Query: 335 CSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ V+S+C+ + ++G+++H+ +K+ + S + V N+++ MY KCG+ E A +F+
Sbjct: 59 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC-VPVANSVLNMYGKCGDSETATTVFE 117
Query: 394 R-------------------------------MPEHNTVSLNSMIAGYAQHGIGMEALRL 422
R MP+ + VS N+MIAGY Q+G+ +AL+L
Sbjct: 118 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 177
Query: 423 FEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDL 480
F ML E+++ P T SVLSACA+ G V G++ + +++ + + + +I
Sbjct: 178 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALIST 235
Query: 481 LGRAGKLTDAERLIE 495
++G + +A R+++
Sbjct: 236 YAKSGSVENARRIMD 250
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
M++K G L DAR +F MPE + VS M+ G + G EA++ M PT T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+VLS+CA T A G+K S + + G + ++++ G+ G A + E M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKL-GLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 498 P 498
P
Sbjct: 120 P 120
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 257/756 (33%), Positives = 386/756 (51%), Gaps = 110/756 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G S+HA+ + ++ ++ N + +Y +CG A F++
Sbjct: 128 TFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEM 187
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ V DLVS+N++++AY GD+ A+ +F+
Sbjct: 188 RERGV----------------------------GDLVSWNSIVAAYMQGGDSIRAMKMFE 219
Query: 121 DMREK-RFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E D +L ++ AS KQ+H A+ G V N+++ Y++
Sbjct: 220 RMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKC 279
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-------------HRE------------- 211
G ++EA +VF M ++KD VSWN+MV Y Q RE
Sbjct: 280 GMMEEANKVFERM-KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAV 338
Query: 212 ---------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
G EAL +F++M ++ TL S+L+ L+ G + H H IK
Sbjct: 339 IAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWIL 398
Query: 263 HQNSH-------IGSGLIDLYAKCSGDMRDCMKVFEEIPQPD--LVLWNTMISGYSQKEE 313
+ + + + + LID+Y+KC + +F+ IP D +V W +I G +Q E
Sbjct: 399 NLDENDPGDDLMVINALIDMYSKCKSP-KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGE 457
Query: 314 YSDQALGCFKKLNRVG--YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+++AL F ++ + P+ + C + AC+ L G+QIHA ++ S +
Sbjct: 458 -ANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLF 516
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N L+ MYSK G+++ AR +FD M + N VS S++ GY HG G EAL++F M +
Sbjct: 517 VANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVG 576
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P +TFV VL AC+H+G V +G YF+ M FG P EHY+CM+DLL RAG+L +A
Sbjct: 577 LVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEA 636
Query: 491 ERLIEAMPFNPGS---IAL--------------KAANHFLQLEPSNAVPYVMLANIYAAS 533
LI MP P +AL AAN L+LE N Y +L+NIYA +
Sbjct: 637 MELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANA 696
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
W++VA IR LM++ G++K+PG SW++ +K F A D SHPM ++I++ L ++ +++
Sbjct: 697 RCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRI 756
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K GYVPD K L HSEKLA+A+G+L+T+ G PI + KNLR CGDCH
Sbjct: 757 KALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCH 816
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+A +IS I EI VRD+ RFH FK+G CSC YW
Sbjct: 817 SAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 152/279 (54%), Gaps = 10/279 (3%)
Query: 197 VSWNSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
V W + ++ H LE LQL++ M L D YT +L A + G HA
Sbjct: 91 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 150
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ---PDLVLWNTMISGYSQKE 312
+ SGF N +G+GL+ +Y +C G + +VF+E+ + DLV WN++++ Y Q
Sbjct: 151 VVFASGFEWNVFVGNGLVSMYGRC-GAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 209
Query: 313 EYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+ S +A+ F+++ +G PD S V V+ AC+++ S GKQ+H ++ + + +
Sbjct: 210 D-SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFED-VF 267
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V NA+V MY+KCG +E+A ++F+RM + VS N+M+ GY+Q G +AL LFE + E
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
I +T+ +V++ A G E F M+ + G EP
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMR-LCGSEP 365
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 18/268 (6%)
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
T F + L H L+ G H +HI I +Y + + + P
Sbjct: 34 TLFHQCKSLASAELIHQQLLVQGLPHDPTHI----ISMYLTFNSPAKALSVLRRLHPSSH 89
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQI 355
V W + S + + L ++++ R+G+ PD +F V+ AC + PS G +
Sbjct: 90 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEI-PSFRCGASV 148
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH---NTVSLNSMIAGYAQ 412
HA+ N + V N LV+MY +CG E+AR++FD M E + VS NS++A Y Q
Sbjct: 149 HAVVFASGFEWN-VFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 413 HGIGMEALRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEP 469
G + A+++FE M E I P ++ V+VL ACA G + G++ +++ +F
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + ++D+ + G + +A ++ E M
Sbjct: 268 VG---NAVVDMYAKCGMMEEANKVFERM 292
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/540 (42%), Positives = 322/540 (59%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N ++ Y G L+ AK +F EM + ++ +WN+MV + EAL LF M L
Sbjct: 139 NIMIKAYLGMGNLESAKNLFDEMPD-RNVATWNAMVTGLTKFEMNEEALLLFSRMNELSF 197
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D Y+L S+L L L+ G Q HA+++K GF N +G L +Y K +G M D
Sbjct: 198 MPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMK-AGSMHDGE 256
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+V +P LV WNT++SG +QK Y + L + + G+ PD +FV VIS+CS L
Sbjct: 257 RVINWMPDCSLVAWNTLMSGKAQKG-YFEGVLDQYCMMKMAGFRPDKITFVSVISSCSEL 315
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ GKQIHA +K S SV ++LV+MYS+CG L+D+ + F E + V +SM
Sbjct: 316 AILCQGKQIHAEAVKAGASSEV-SVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSM 374
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IA Y HG G EA++LF M + N+P ITF+S+L AC+H G +G F MM +G
Sbjct: 375 IAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYG 434
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAA 509
+ +HY+C++DLLGR+G L +AE +I +MP IA + A
Sbjct: 435 LKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVA 494
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ L+++P ++ YV+LANIY+++ +W+ V+ +RR M+D+ V+K+PG SW+EVK Q+H F
Sbjct: 495 DEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQF 554
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D HP EI+ YLEE++ ++K+ GYVPD KE+ L HHSEKLA+AF
Sbjct: 555 HMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAF 614
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L++T G PI VMKNLR+C DCH AIK+IS I EI VRD+ RFH FK+G CSCGDYW
Sbjct: 615 ALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 230/475 (48%), Gaps = 13/475 (2%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L+ C+ + + GK LH+L + ++SNH + LYSK G L AA F++
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N+ S N+++ AY + SA+ LFD++P ++ ++N +++ E AL LF
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M E F D ++L ++ ++ L+ +Q+H + CGF+ V SL Y + G
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ + +RV M + V+WN+++ Q L + M D T S+++
Sbjct: 252 MHDGERVINWMPDC-SLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVIS 310
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ + L L G Q HA +K+G + S L+ +Y++C G ++D +K F E + D+V
Sbjct: 311 SCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC-GCLQDSIKTFLECKERDVV 369
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
LW++MI+ Y + ++A+ F ++ + ++ +F+ ++ ACS+ G + +
Sbjct: 370 LWSSMIAAYGFHGQ-GEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDM 428
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGM 417
+K R+ LV + + G LE+A + MP + + + ++++ H
Sbjct: 429 MVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAE 488
Query: 418 EALRLFEWMLETNIPPTNITFV---SVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
A R+ + +L + P + ++V ++ S+ V+E ++ +M M EP
Sbjct: 489 IARRVADEVLRID-PQDSASYVLLANIYSSANRWQNVSEVRR--AMKDKMVKKEP 540
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 36/195 (18%)
Query: 337 FVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK-------------- 381
F ++ AC L S SLGKQ+H+L S++ ++N L+ +YSK
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKF-ISNHLLNLYSKFGELQAAVALFDRM 130
Query: 382 -----------------CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
GNLE A+ LFD MP+ N + N+M+ G + + EAL LF
Sbjct: 131 PRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFS 190
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGR 483
M E + P + SVL CAH G + GQ+ + +MK GFE + + +
Sbjct: 191 RMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMK--CGFECNLVVGCSLAHMYMK 248
Query: 484 AGKLTDAERLIEAMP 498
AG + D ER+I MP
Sbjct: 249 AGSMHDGERVINWMP 263
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ +C L GK +HA +K + + + +YS+CGCL + F +
Sbjct: 304 TFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLEC 363
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
+ +V ++ ++AAY + A +LF+++ Q +L +++ +L+ A + CG + L
Sbjct: 364 KERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGL 423
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
LF DM K++ GL + CL+ L R
Sbjct: 424 GLF-DMMVKKY--------GLKARLQHYTCLVDLL-----------------------GR 451
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+G L+EA+ + M D + W +++ A H+ A ++ E++ +
Sbjct: 452 SGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRI 500
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/655 (36%), Positives = 370/655 (56%), Gaps = 45/655 (6%)
Query: 61 QHANVFSF--NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ ++FSF + L+ Y + I AR+LFD++P +V++N++IS++ G T+ A+ L
Sbjct: 29 KSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIEL 88
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFD-HYASVNNSLLTCYS 175
+ +M + D +T S + A S ++ H LA+ GF+ V ++ Y+
Sbjct: 89 YDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYA 148
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + +A+ VF + + KD V + +++V Y Q EAL++F++MV ++ + YTLA
Sbjct: 149 KFGKMKDARFVFDRVLD-KDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLA 207
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L + +L DLV G H ++KSG + L+ +Y+KC+ + D +KVF +
Sbjct: 208 SVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNM-VEDSIKVFNSLAY 266
Query: 296 PDLVLWNTMISGYSQ--KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
V W + I G Q +EE AL F+++ R P+ +F ++ ACS+L+ G
Sbjct: 267 ASHVTWTSFIVGLVQNGREEI---ALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAG 323
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+QIHA+T+K+ + N+ V+ AL+ +Y KCGN+E AR +F+ + E + VS+N+MI YAQ
Sbjct: 324 EQIHAVTVKLGVDGNKY-VDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQ 382
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+G G EAL LFE M + P +TF+S+L AC + G V EG + FS++++ E +
Sbjct: 383 NGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRD 442
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQL 515
HY+CMIDLLGRA + +A LIE NP I A K L
Sbjct: 443 HYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ 501
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
P + +++L NIYA++GKW+ V ++ RD ++K P SW+++ +++H F+A D S
Sbjct: 502 APRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLS 561
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD---------KEKR---LVHHSEKLAVAFGLLST- 622
HP EI L E+ K+ GY PD +EK+ L +HSEKLA+AF L T
Sbjct: 562 HPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTC 621
Query: 623 SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+CGDCH+ IKF+S + GR+I RD RFH FK G CSC DYW
Sbjct: 622 GKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 4/226 (1%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
M S++ FT+ + L H H++KSG S G LID Y KCS + + K+F
Sbjct: 1 MNCYTSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCS-VITEARKLF 58
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+E+P +V WN+MIS + + + + +A+ + + G PD +F + A S + S
Sbjct: 59 DEMPNRHIVTWNSMISSHVSRGK-TKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVS 117
Query: 351 L-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G++ H L + + + V +V MY+K G ++DAR +FDR+ + + V ++I G
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
Y Q G+ EAL +FE M+ + I P T SVL +C + G + G+
Sbjct: 178 YNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGK 223
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 50/317 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +C DLV GK +H L +K+ + + +YSKC + + FN
Sbjct: 205 TLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSL 264
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AYA V++ + I G E ALS+F+
Sbjct: 265 -------------AYASH------------------VTWTSFIVGLVQNGREEIALSMFR 293
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M + FT S ++ A S +L ++ +Q+H + + G D V+ +L+ Y +
Sbjct: 294 EMIRCSISPNHFTFSSILHACS-SLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKC 352
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +++A+ VF + E+ D VS N+M+ AY Q+ G EAL+LF+ M L ++ T SI
Sbjct: 353 GNVEKARSVFESLTEL-DVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISI 411
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--- 294
L A + + G Q + + +N+H D Y C D+ K FEE
Sbjct: 412 LLACNNAGLVEEGCQIFSLI------RNNHSIELTRDHYT-CMIDLLGRAKRFEEAAMLI 464
Query: 295 ----QPDLVLWNTMISG 307
PD++ W T+++
Sbjct: 465 EEGKNPDVIQWRTLLNA 481
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 316/542 (58%), Gaps = 39/542 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSL 225
N+LL Y++ G LD A VF ++ ++ V+W S++ AY REGL EA++LF EM
Sbjct: 37 NTLLDMYAKCGVLDGAILVF-DLMSVRTVVTWTSLIAAYA--REGLSDEAIRLFHEMDRE 93
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ D++T+ ++L A L G H ++ ++ N + + L+D+YAKC G M D
Sbjct: 94 GVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKC-GSMED 152
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF E+P D++ WNTMI GYS K ++AL F + + PD + C++ AC+
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYS-KNSLPNEALSLFGDM-VLEMKPDGTTLACILPACA 210
Query: 346 NL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+L S GK++H ++ S++ V NALV MY KCG AR LFD +P + ++
Sbjct: 211 SLASLDRGKEVHGHILRNGFFSDQ-QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWT 269
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
MIAGY HG G A+ F M + I P ++F+S+L AC+H+G + EG ++F++M+D
Sbjct: 270 VMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDE 329
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALK 507
+P+ EHY+C++DLL R+GKL A + I++MP P + +A K
Sbjct: 330 CNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEK 389
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
A H +LEP N YV+LAN YA + KWEEV +R+ + RG++K PG SWIEVK ++H
Sbjct: 390 VAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVH 449
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAV 615
+F+A + SHP K+I L+ + KMK+ GY P KE L HSEKLA+
Sbjct: 450 IFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAM 509
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AFG+L+ I V KNLR+CGDCH KFIS GREI +RD+ RFH FKDG C C
Sbjct: 510 AFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRG 569
Query: 676 YW 677
+W
Sbjct: 570 FW 571
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 146/267 (54%), Gaps = 8/267 (2%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ SIL A + D+ G H +K+ H + + L+D+YAKC G + + VF+ +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKC-GVLDGAILVFDLM 59
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLG 352
+V W ++I+ Y+ +E SD+A+ F +++R G PD + V+ AC+ N S G
Sbjct: 60 SVRTVVTWTSLIAAYA-REGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K +H + +++SN I V NAL+ MY+KCG++EDA +F MP + +S N+MI GY++
Sbjct: 119 KDVHNYIRENDMQSN-IFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEG 471
+ + EAL LF M+ + P T +L ACA + G++ ++++ GF +
Sbjct: 178 NSLPNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRN--GFFSDQ 234
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++D+ + G A L + +P
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIP 261
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 136/315 (43%), Gaps = 46/315 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H +N + + ++ N + +Y+KCG + A+ F +
Sbjct: 101 TITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM 160
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N ++ Y++ + +P ALSLF
Sbjct: 161 PVKDIISWNTMIGGYSK-----------NSLPN--------------------EALSLFG 189
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DM + DG TL+ ++ A ++ +L K++H + GF V N+L+ Y + G
Sbjct: 190 DMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCG 248
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ R+ ++M KD ++W M+ YG H G A+ F EM + D + SIL
Sbjct: 249 -VPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISIL 307
Query: 239 TAFTSLEDLVGGLQFHAHL-----IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
A + L G +F + +K + I +DL A+ SG + K + +
Sbjct: 308 YACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACI----VDLLAR-SGKLAMAYKFIKSM 362
Query: 294 P-QPDLVLWNTMISG 307
P +PD +W ++SG
Sbjct: 363 PIEPDATIWGALLSG 377
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/549 (38%), Positives = 318/549 (57%), Gaps = 35/549 (6%)
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+H + F H + N+LL Y++ G L+EA++VF +M + +D V+W +++ Y QH
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ-RDFVTWTTLISGYSQHD 140
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
+AL F +M+ + +TL+S++ A + G Q H +K GF N H+GS
Sbjct: 141 RPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGS 200
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
L+DLY + G M D VF+ + + V WN +I+G++++ +++AL F+ + R G+
Sbjct: 201 ALLDLYTR-YGLMDDAQLVFDALESRNDVSWNALIAGHARRSG-TEKALELFQGMLRDGF 258
Query: 331 HPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P S+ + ACS+ GK +HA IK + + N L+ MY+K G++ DAR
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GNTLLDMYAKSGSIHDAR 317
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
++FDR+ + + VS NS++ YAQHG G EA+ FE M I P I+F+SVL+AC+H+G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA- 508
+ EG Y+ +MK G PE HY ++DLLGRAG L A R IE MP P + KA
Sbjct: 378 LLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Query: 509 ----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
A H +L+P + P+V+L NIYA+ G+W + A +R+ M++ GV+
Sbjct: 437 LNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH---- 608
K+P SW+E++ +H+FVA D HP +EI EE+ K+K+ GYVPD +VH
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQ 556
Query: 609 --------HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
HSEK+A+AF LL+T G I + KN+R+CGDCH AIK S + GREI VRDT
Sbjct: 557 EREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDT 616
Query: 661 YRFHCFKDG 669
RFH FKD
Sbjct: 617 NRFHHFKDA 625
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L T + L+ G HAH+++S F + +G+ L+++YAKC G + + KVFE++PQ
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLEEARKVFEKMPQ 123
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLGKQ 354
D V W T+ISGYSQ + D AL F ++ R GY P++ + VI +A + G Q
Sbjct: 124 RDFVTWTTLISGYSQHDRPCD-ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K SN + V +AL+ +Y++ G ++DA+ +FD + N VS N++IAG+A+
Sbjct: 183 LHGFCVKCGFDSN-VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM----KDMFGFEPE 470
+AL LF+ ML P++ ++ S+ AC+ TG + +G+ + M + + F
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG- 300
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ ++G + DA ++ + +
Sbjct: 301 ----NTLLDMYAKSGSIHDARKIFDRL 323
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 12 RRDLVTGKSLHALYLKNLVPFSA-----------YLSNHFIL-------LYSKCGCLSAA 53
+RD VT +L + Y ++ P A Y N F L + GC
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 54 HHAF--NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H F +NV + LL Y R + A+ +FD + + VS+N LI+ +A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNS 169
TE AL LF+ M F F+ + L A S+ L K +H I G A N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
LL Y+++G + +A+++F + + +D VSWNS++ AY QH G EA+ F+EM + +
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ + S+LTA + L G ++ + K G + ++DL + +GD+ ++
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR-AGDLNRALRF 420
Query: 290 FEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
EE+P +P +W +++ + + LG + + PDD
Sbjct: 421 IEEMPIEPTAAIWKALLNACRM---HKNTELGAYAAEHVFELDPDD 463
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ + C L GK +HA +K+ A+ N + +Y+K G + A F++
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N LL AYA+ A F+++ +P+ +S+ ++++A + G +
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 117 SLFKDMRE 124
++ M++
Sbjct: 384 HYYELMKK 391
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 359/642 (55%), Gaps = 41/642 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YA+ I A +F+++P+ D +S+N++IS + G A+ LF M + +
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D TL ++ A + + + +H ++ G S+ N+LL YS ++
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F MG+ K+ VSW +M+ +Y R GL + L QEMV + D++ + S L AF
Sbjct: 576 FRSMGQ-KNVVSWTAMITSY--MRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGD 632
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
E L G H + I++G + + + L+++Y KC ++ + +F+ + D++ WNT+
Sbjct: 633 ESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCR-NVEEARLIFDRVTNKDVISWNTL 691
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I GYS + + +++ F + + + P+ + C++ A +++S G++IHA ++
Sbjct: 692 IGGYS-RNNFPNESFSLFSDM-LLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRG 749
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + +NALV MY KCG L AR LFDR+ + N +S MIAGY HG G A+ LF
Sbjct: 750 FLEDSYA-SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALF 808
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E M + I P +F ++L AC H+G AEG+++F M+ + EP+ +HY+C++DLL R
Sbjct: 809 EQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSR 868
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
G L +A IE+MP P S +A K A+ +LEP N YV+L
Sbjct: 869 TGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLL 928
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
ANIYA + +WE V ++ + RG+++ G+SWIEV+ ++HVF+A++ +HP I +L
Sbjct: 929 ANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFL 988
Query: 587 EEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
++++R+M+Q G+ P K ++ L HS KLAVAFG+L+ G PI V KN
Sbjct: 989 DDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNS 1048
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
++C CH A KFIS + REI +RD+ RFH F+ GRCSC Y
Sbjct: 1049 KVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 256/536 (47%), Gaps = 54/536 (10%)
Query: 71 LLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
L+ AY + + AR +FD +P D+ + +L+SAYA GD + A+SLF+ M+
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201
Query: 129 TDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D +S ++ +S +L + +H L G +V N+L+ YSR G +++A RV
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M +D +SWNSM+ + A+ LF +M S + T+ S+L A L
Sbjct: 262 FDSM-HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320
Query: 247 LVGGLQFHAHLIKSGFH----------QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ G H + +KSG ++ +GS L+ +Y KC GDM +VF+ +
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKC-GDMASARRVFDAMSSK 379
Query: 297 DLV-LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQ 354
V +WN ++ GY++ E+ +++L F +++ +G PD+ + C++ + LS + G
Sbjct: 380 GNVHVWNLIMGGYAKVGEF-EESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLV 438
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
H +K+ + + +V NAL++ Y+K + DA +F+RMP +T+S NS+I+G + +G
Sbjct: 439 AHGYIVKLGFGA-QCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNG 497
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHT-----GKVAEGQKYFSMMKDMFGFEP 469
+ EA+ LF M ++T +SVL ACA + G+V G +S+ + G
Sbjct: 498 LNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG---YSVKTGLIG--- 551
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANI 529
E + ++D+ ++ F + N V + +
Sbjct: 552 ETSLANALLDMYSNCSDWQSTNQI------------------FRSMGQKNVVSWTAMITS 593
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
Y +G +++VA + + M G++ V +H F A D S K +H Y
Sbjct: 594 YMRAGLFDKVAGLLQEMVLDGIRPDV----FAVTSALHAF-AGDESLKQGKSVHGY 644
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 189/400 (47%), Gaps = 16/400 (4%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y+R R+ A ++FD + D +S+N++I G +A+ LF M + +
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302
Query: 129 TDGFTLSGLITASSN-NLCLI-KQLHCLAIYC----GFDHY------ASVNNSLLTCYSR 176
T+ ++ A + LI K +H ++ G D A++ + L+ Y +
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A+RVF M + WN ++ Y + E E+L LF +M L + D + ++
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L T L GL H +++K GF + + LI YAK S + D + VF +P+
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAK-SNMIGDAVLVFNRMPRQ 481
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQI 355
D + WN++ISG S + +A+ F ++ G D + + V+ AC+ G+ +
Sbjct: 482 DTISWNSVISGCSSN-GLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVV 540
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H ++K + S+ NAL+ MYS C + + ++F M + N VS +MI Y + G+
Sbjct: 541 HGYSVKTGL-IGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGL 599
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ L + M+ I P S L A A + +G+
Sbjct: 600 FDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGK 639
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWNTMISGYSQKEEYSDQALGC 321
+ S +G L+ Y KC GD+ + VF+ +P D+ +W +++S Y++ ++ +A+
Sbjct: 134 KGSVLGKRLVLAYLKC-GDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDF-QEAVSL 191
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F+++ G PD + CV+ S+L S + G+ IH L K+ + +V NAL+A+YS
Sbjct: 192 FRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGL-GQACAVANALIAVYS 250
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
+CG +EDA R+FD M + +S NSMI G +G A+ LF M +++T +S
Sbjct: 251 RCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLS 310
Query: 441 VLSACAHTG 449
VL ACA G
Sbjct: 311 VLPACAGLG 319
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 42/303 (13%)
Query: 11 GRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNV 70
G L GKS+H ++N + ++N + +Y KC + A F++ + +V S+N
Sbjct: 631 GDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNT 690
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y+R + P + SLF DM + F +
Sbjct: 691 LIGGYSR-----------NNFPN--------------------ESFSLFSDMLLQ-FRPN 718
Query: 131 GFTLSGLI--TASSNNLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNGFLDEAKRV 186
T++ ++ AS ++L +++H A+ GF D YAS N+L+ Y + G L A RV
Sbjct: 719 AVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYAS--NALVDMYVKCGALLVA-RV 775
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
++ K+ +SW M+ YG H G A+ LF++M + D + ++IL A
Sbjct: 776 LFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGL 835
Query: 247 LVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
G +F + K + ++DL ++ +GD+++ ++ E +P +PD +W ++
Sbjct: 836 AAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSR-TGDLKEALEFIESMPIEPDSSIWVSL 894
Query: 305 ISG 307
+ G
Sbjct: 895 LHG 897
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L L G+ +HA L+ +Y SN + +Y KCG L A F++
Sbjct: 721 TMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRL 780
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ S+ +++A Y A LF+Q+ +PD S++ ++ A G
Sbjct: 781 TKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGR 840
Query: 117 SLFKDMREK 125
FK M+++
Sbjct: 841 RFFKAMQKE 849
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/711 (35%), Positives = 364/711 (51%), Gaps = 76/711 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+LK + + G+ +HA +K L P +L+N+ I +YSK H
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSK-------------LDHP 58
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
SAR + P ++VS+ +L+S A G +AL F +MR
Sbjct: 59 E------------------SARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMR 100
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + FT + A ++ + KQ+H LA+ CG V S Y + D
Sbjct: 101 REGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 182 EAKRVFYEMGEIKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+++F E+ E E +WN+ + V G+ +E +EA F E + + T L
Sbjct: 161 DARKLFDEIPERNLE-TWNAYISNSVTDGRPKEAIEA---FIEFRRIGGQPNSITFCGFL 216
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G+Q H + +SGF + + +GLID Y KC +R +F E+ +
Sbjct: 217 NACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCK-QIRSSEIIFAEMGMKNA 275
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W ++++ Y Q E ++A + + + D V+SAC+ ++ LG+ IHA
Sbjct: 276 VSWCSLVAAYVQNHE-DEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + N I V +ALV MY KCG +ED+ + FD MPE N V+LNS+I GYA G
Sbjct: 335 HAVKACVERN-IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVD 393
Query: 418 EALRLFEWMLETNI--PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
AL LFE M P +TFVS+LSAC+ G V G K F MK +G EP EHYS
Sbjct: 394 MALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYS 453
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPS 518
C++D+LGRAG + A I+ MP P + + AA + +L+P
Sbjct: 454 CIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPK 513
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ +V+L+N +AA+G+W E T+R M+ G++K G+SWI VK Q+H F A+D SH M
Sbjct: 514 DSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKM 573
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
KEI L ++ KM+ AGY PD K + HHSEKLA+AFGL++
Sbjct: 574 NKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSV 633
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI + KNLRICGDCH+ KF+S REI VRD RFH FKDG CSC DYW
Sbjct: 634 PIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 156/371 (42%), Gaps = 45/371 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L G +H L ++ + N I Y KC
Sbjct: 211 TFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKC------------- 257
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+Q+R S+ +F ++ + VS+ +L++AY + E A L+
Sbjct: 258 ----------------KQIR--SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R++ +T F +S +++A + L L + +H A+ + V ++L+ Y + G
Sbjct: 300 RSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCG 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG--LDMYTLAS 236
++++++ F EM E K+ V+ NS++ Y + AL LF++M G + T S
Sbjct: 360 CIEDSEQAFDEMPE-KNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVS 418
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G++ F + G + S ++D+ + +G + + +++P
Sbjct: 419 LLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGR-AGMVEQAFEFIKKMPI 477
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
+P + +W + + + LG N P D ++ SN + G+
Sbjct: 478 KPTISVWGALQNACRM---HGKPHLGILAAENLFKLDPKDSGNHVLL---SNTFAAAGRW 531
Query: 355 IHALTIKIEIR 365
A T++ E++
Sbjct: 532 AEANTVREEMK 542
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/633 (35%), Positives = 355/633 (56%), Gaps = 38/633 (6%)
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFDTDGFTLSGL 137
L + A +F D++++N+++ A+ + AL + +M E+ R D FT L
Sbjct: 26 LGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSL 85
Query: 138 ITASSNNL--CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ + L + K LH + + +LL Y+ G L A+ +F MG ++
Sbjct: 86 LKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGH-RN 144
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+V W SM+ Y ++ EAL L+++M D T+A++++A L+DL G++ H+
Sbjct: 145 KVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS 204
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
H+ + + +GS L+++YAKC GD++ +VF+++ D+ W+ +I GY K S
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKC-GDLKTARQVFDQLSDKDVYAWSALIFGYV-KNNRS 262
Query: 316 DQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+AL F+++ P++ + + VISAC+ L G+ +H + + + + +S+NN
Sbjct: 263 TEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ-KGHSVSLNN 321
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+L+ M+SKCG+++ A+R+FD M + +S NSM+ G A HG+G EAL F M T++ P
Sbjct: 322 SLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQP 381
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
ITF+ VL+AC+H G V EG+K F ++ ++G + EHY CM+DLL RAG L +A
Sbjct: 382 DEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREF 441
Query: 494 IEAMPFNP-----GS------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
I MP P GS + +AA L+LEP+N Y++L+NIYA W
Sbjct: 442 IRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMW 501
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
EV +R LM ++G+QK PG S + + H F+A D SHP I EI L ++ K+K
Sbjct: 502 NEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLV 561
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GYV D KE+ + HSEKLA+ +GLL + G I+++KNLR+C DCH I
Sbjct: 562 GYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLI 621
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K +S I R+IT+RD RFH FKDG CSC DYW
Sbjct: 622 KLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 207/450 (46%), Gaps = 61/450 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + GK LH +K ++ Y+ + +Y+ CG L +A
Sbjct: 81 TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA------- 133
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R LF+++ + V + ++IS Y AL L+K
Sbjct: 134 ------------------------RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYK 169
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E F D T++ L++A + +L + +LH A + ++L+ Y++ G
Sbjct: 170 KMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCG 229
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM----YTL 234
L A++VF ++ + KD +W++++ Y ++ EALQLF+E+ G +M T+
Sbjct: 230 DLKTARQVFDQLSD-KDVYAWSALIFGYVKNNRSTEALQLFREVAG---GSNMRPNEVTI 285
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++++A L DL G H ++ ++ + + + LID+++KC GD+ ++F+ +
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC-GDIDAAKRIFDSMS 344
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-----SP 349
DL+ WN+M++G + +AL F + PD+ +F+ V++ACS+
Sbjct: 345 YKDLISWNSMVNGLAL-HGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGK 403
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIA 408
L +I AL + ++S +V + + G L +AR MP + + SM+
Sbjct: 404 KLFYEIEAL-YGVRLKSEHYG---CMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLG 459
Query: 409 G---YAQHGIGMEALRLFEWMLETNIPPTN 435
Y +G EA R +LE + PTN
Sbjct: 460 ACRVYNNLELGEEAARC---LLE--LEPTN 484
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/711 (35%), Positives = 364/711 (51%), Gaps = 76/711 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+LK + + G+ +HA +K L P +L+N+ I +YSK H
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSK-------------LDHP 58
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
SAR + P ++VS+ +LIS A G +AL F +MR
Sbjct: 59 E------------------SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + FT A ++ + KQ+H LA+ CG V S Y + D
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 182 EAKRVFYEMGEIKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+++F E+ E E +WN+ + V G+ RE +EA F E + + T + L
Sbjct: 161 DARKLFDEIPERNLE-TWNAFISNSVTDGRPREAIEA---FIEFRRIDGHPNSITFCAFL 216
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G+Q H +++SGF + + +GLID Y KC +R +F E+ +
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK-QIRSSEIIFTEMGTKNA 275
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W ++++ Y Q E ++A + + + D V+SAC+ ++ LG+ IHA
Sbjct: 276 VSWCSLVAAYVQNHE-DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + I V +ALV MY KCG +ED+ + FD MPE N V+ NS+I GYA G
Sbjct: 335 HAVKACVERT-IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 418 EALRLFEWMLETNIPPTN--ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
AL LFE M PT +TFVS+LSAC+ G V G K F M+ +G EP EHYS
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYS 453
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPS 518
C++D+LGRAG + A I+ MP P + L AA + +L+P
Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ +V+L+N +AA+G+W E T+R ++ G++K G+SWI VK Q+H F A+D SH +
Sbjct: 514 DSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHIL 573
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
KEI L ++ +M+ AGY PD K + HHSEKLA+AFGLLS
Sbjct: 574 NKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSV 633
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI + KNLRICGDCH+ KF+S REI VRD RFH FKDG CSC DYW
Sbjct: 634 PIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 187/412 (45%), Gaps = 47/412 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF K R VTGK +HAL + KCG +
Sbjct: 110 TFPCAFKAVASLRLPVTGKQIHALAV-------------------KCGRI---------- 140
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+VF Y + AR+LFD+IP+ +L ++N IS G A+ F
Sbjct: 141 --LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ R + T + A S+ +L L QLH L + GFD SV N L+ Y +
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++ +F EMG K+ VSW S+V AY Q+ E +A L+ + + ++S+L
Sbjct: 259 QIRSSEIIFTEMG-TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + L G HAH +K+ + +GS L+D+Y KC G + D + F+E+P+ +L
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC-GCIEDSEQAFDEMPEKNL 376
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
V N++I GY+ + + D AL F+++ G P+ +FV ++SACS G +
Sbjct: 377 VTRNSLIGGYAHQGQV-DMALALFEEMAPRGCGPTPNYMTFVSLLSACSR----AGAVEN 431
Query: 357 ALTIKIEIRSNRISVNNA-----LVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ I +RS A +V M + G +E A +MP T+S+
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 483
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 156/371 (42%), Gaps = 45/371 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L G LH L L++ + N I Y KC
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC------------- 257
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+Q+R S+ +F ++ + VS+ +L++AY + E A L+
Sbjct: 258 ----------------KQIR--SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R+ +T F +S +++A + L L + +H A+ + V ++L+ Y + G
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG--LDMYTLAS 236
++++++ F EM E K+ V+ NS++ Y + AL LF+EM G + T S
Sbjct: 360 CIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G++ F + G + S ++D+ + +G + + +++P
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR-AGMVERAYEFIKKMPI 477
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
QP + +W + + + LG N P D ++ SN + G+
Sbjct: 478 QPTISVWGALQNACRM---HGKPQLGLLAAENLFKLDPKDSGNHVLL---SNTFAAAGRW 531
Query: 355 IHALTIKIEIR 365
A T++ E++
Sbjct: 532 AEANTVREELK 542
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/632 (37%), Positives = 362/632 (57%), Gaps = 44/632 (6%)
Query: 87 LFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF++ + + D+ S+N++I+ A GD+ AL F MR+ + I A S+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 CLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+ KQ H A G+ V+++L+ YS G L++A++VF E+ + +D VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RDIVSWTSMI 149
Query: 204 VAYGQHREGLEALQLFQEMVSLQ------LGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
Y + L+A+ LF++++ + + LD L S+++A + + H+ +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 258 IKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
IK GF + +G+ L+D YAK G + K+F++I D V +N+++S Y+Q S+
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSN 268
Query: 317 QALGCFKKL--NRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNA 374
+A F++L N+V +++ + + +GK IH I++ + + I V +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTS 327
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
++ MY KCG +E AR+ FDRM N S +MIAGY HG +AL LF M+++ + P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITFVSVL+AC+H G EG ++F+ MK FG EP EHY CM+DLLGRAG L A LI
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 495 EAMPFNPGSI---ALKAA--------------NHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ M P SI +L AA +L+ SN Y++L++IYA +G+W+
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V +R +M++RG+ K PGFS +E+ ++HVF+ D HP ++I+ +L E++RK+ +AG
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 598 YVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV +KE L HSEKLA+AFG+++T G + V+KNLR+C DCHN IK
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS I RE VRD RFH FKDG CSCGDYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 214/437 (48%), Gaps = 29/437 (6%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
AF +++F + L+ Y+ ++ AR++FD+IP+ D+VS+ ++I Y G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159
Query: 114 SALSLFKDMR-EKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYAS 165
A+SLFKD+ ++ D D L + S + C L + +H I GFD S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 166 VNNSLLTCYSRN--GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V N+LL Y++ G + A+++F ++ + KD VS+NS++ Y Q EA ++F+ +V
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 224 SLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ + + TL+++L A + L G H +I+ G + +G+ +ID+Y KC G
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC-GR 337
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ K F+ + ++ W MI+GY ++ +AL F + G P+ +FV V++
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGM-HGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 343 ACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHN 399
ACS+ L + +A+ + + + +V + + G L+ A L RM + +
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPG-LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 400 TVSLNSMIAGYAQHG----IGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEG 454
++ +S++A H + RLFE + +N + +LS A G+ +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFE------LDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 455 QKYFSMMKDMFGFEPEG 471
++ +MK+ +P G
Sbjct: 510 ERVRMIMKNRGLVKPPG 526
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L GK +H ++ + + I +Y KCG + A AF++ ++ NV S+ ++A
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 75 YARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
Y A A +LF D +P+ +++ ++++A + G F M+ +
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----- 417
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+ G +HY + + L R GFL +A + M
Sbjct: 418 -----------------------FGVEPGLEHYGCMVDLL----GRAGFLQKAYDLIQRM 450
Query: 191 GEIKDEVSWNSMVVAYGQHR 210
D + W+S++ A H+
Sbjct: 451 KMKPDSIIWSSLLAACRIHK 470
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/673 (35%), Positives = 367/673 (54%), Gaps = 68/673 (10%)
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLFKDMREKR 126
+ +L+ Y+ + + +F+ +P P +++ ++I Y G +LS F M
Sbjct: 42 LSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASG 101
Query: 127 FDTDGFTLSGLITASS--NNLCLIKQLH--CLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D ++ + + +L + +H + + GFD Y N+L+ YS+ L+E
Sbjct: 102 KYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC--NALMNMYSKFWSLEE 159
Query: 183 A---KRVF-------------------------YEMGEIKDEVSWNSMVVAYGQHREGLE 214
K+VF +EM +D VSWN+++ Q+ +
Sbjct: 160 VNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHED 219
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL + +EM + L D +TL+S+L F +L+ G + H + I++G+ + IGS LID
Sbjct: 220 ALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLID 279
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+YAKC+ + D +VF +PQ D + WN++I+G Q + D+ L F+++ P+
Sbjct: 280 MYAKCT-RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMF-DEGLKFFQQMLIAKIKPNH 337
Query: 335 CSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
SF ++ AC++L+ LGKQ+H I+ N + + +ALV MY+KCGN+ AR +FD
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN-VFIASALVDMYAKCGNIRTARWIFD 396
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+M ++ VS +MI GYA HG +A+ LF+ M + P + F++VL+AC+H G V E
Sbjct: 397 KMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDE 456
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI-------- 504
KYF+ M + P EHY+ + DLLGR G+L +A I M P GS+
Sbjct: 457 AWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAAC 516
Query: 505 --------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
A K + ++P N YV+L+NIY+A+G+W++ +R MRD+G++KKP
Sbjct: 517 RVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPA 576
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------KEKR- 605
SWIE+K ++H FVA D SHP I+ L+ + +M++ GYV D ++KR
Sbjct: 577 CSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRY 636
Query: 606 -LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L HSE+LA+ FG++ST G I V KNLR+C DCH A KFIS I GREI VRD RFH
Sbjct: 637 LLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFH 696
Query: 665 CFKDGRCSCGDYW 677
FKDG+CSCGD+W
Sbjct: 697 HFKDGKCSCGDFW 709
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 184/381 (48%), Gaps = 39/381 (10%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQLH + S+ +++L+ YS L ++ +F + ++W S++ Y
Sbjct: 25 KQLHAQILRTSLPS-PSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTS 83
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
H L +L F +M++ D S+L + T ++DL G H +I+ G + +
Sbjct: 84 HGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYT 143
Query: 269 GSGLIDLYAKC--------------SGDMRDCM--------------KVFEEIPQPDLVL 300
+ L+++Y+K G D KVFE +P+ D+V
Sbjct: 144 CNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVS 203
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALT 359
WNT+ISG +Q + D AL +++ PD + V+ + L GK+IH
Sbjct: 204 WNTVISGNAQNGMHED-ALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I+ ++ + + ++L+ MY+KC ++D+ R+F +P+H+ +S NS+IAG Q+G+ E
Sbjct: 263 IRNGYDAD-VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHY--SC 476
L+ F+ ML I P +++F S++ ACAH + G++ +++ F +G + S
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF----DGNVFIASA 377
Query: 477 MIDLLGRAGKLTDAERLIEAM 497
++D+ + G + A + + M
Sbjct: 378 LVDMYAKCGNIRTARWIFDKM 398
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
+A A+VF + L+ YA+ R+ + ++F +PQ D +S+N++I+ G +
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDE 320
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
L F+ M + + + S ++ A ++ L L KQLH I FD + ++L+
Sbjct: 321 GLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVD 380
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y++ G + A+ +F +M E+ D VSW +M++ Y H +A+ LF+ M + +
Sbjct: 381 MYAKCGNIRTARWIFDKM-ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYV 439
Query: 233 TLASILTA 240
++LTA
Sbjct: 440 AFMAVLTA 447
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
NVF + L+ YA+ I +AR +FD++ D+VS+ +I YA G A+SLFK M
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429
Query: 123 REKRFDTDGFTLSGLITASSNNLCL---IKQLHCLA----IYCGFDHYASVNNSLLTCYS 175
+ + ++TA S+ + K + + I G +HYA+V + L
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL----G 485
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G L+EA +M W++++ A H+
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHK 520
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/649 (35%), Positives = 361/649 (55%), Gaps = 49/649 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVS--YNTLISAYADCGDTESALSLFKDMRE-K 125
++L AA A + A LF P+P L + YN L+ A G E AL LF +M +
Sbjct: 54 SLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVA 113
Query: 126 RFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D T++ + S + +C + + + A+ G V +SL+ Y+ +
Sbjct: 114 SVCPDQHTVACALK-SCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAA 172
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F + E V WN+++ AY ++ +E +++F+ M+ + + D TL S++TA
Sbjct: 173 AQLLFDAVEE-NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACG 231
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+ D G ++ + G +N ++ + LID+YAKC G++ ++F+ + D+V W+
Sbjct: 232 RIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKC-GELGKARRLFDGMQSRDVVAWS 290
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
MISGY+Q ++ +AL F ++ P+D + V V+SAC+ L GK +H+
Sbjct: 291 AMISGYTQADQ-CREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSY--- 346
Query: 362 IEIRSNRISVN----NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IR R+S+ ALV Y+KCG ++DA F+ MP N+ + ++I G A +G G
Sbjct: 347 --IRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGR 404
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF M + +I PT++TF+ VL AC+H+ V EG+++F M +G +P EHY C+
Sbjct: 405 EALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCV 464
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
+DLLGRAG + +A + I MP P ++ + A + L PS++
Sbjct: 465 VDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHS 524
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L+NIYA+ G+W+ A IR+ M+DRG++K PG S IE+ + F AED HP +K
Sbjct: 525 GDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLK 584
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ +EEM ++K AGY+P +KE + HHSEKLA+AFGL+ G I
Sbjct: 585 EIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATI 644
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+C DCH+A K IS + REI VRD RFH FKDG CSC DYW
Sbjct: 645 RLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 182/375 (48%), Gaps = 12/375 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
+A + A+ F + L+ YA +A+A+ LFD + + +V +N +I+AY G+
Sbjct: 144 YAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWME 203
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
+ +FK M E D TL ++TA + L K + G ++ +L+
Sbjct: 204 VVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALID 263
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y++ G L +A+R+F M + +D V+W++M+ Y Q + EAL LF EM ++ +
Sbjct: 264 MYAKCGELGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDV 322
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T+ S+L+A L L G H+++ + +G+ L+D YAKC G + D ++ FE
Sbjct: 323 TMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKC-GCIDDAVEAFES 381
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPS 350
+P + W +I G + +AL F + + P D +F+ V+ ACS+ L
Sbjct: 382 MPVKNSWTWTALIKGMATNGR-GREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEE 440
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG 409
+ ++T I+ R +V + + G +++A + MP E N V ++++
Sbjct: 441 GRRHFDSMTQDYGIKP-RAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSS 499
Query: 410 YAQHG---IGMEALR 421
A H IG EAL+
Sbjct: 500 CAVHKNVEIGEEALK 514
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 44/234 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK +H+ + + + L + Y+KCGC+ A A
Sbjct: 323 TMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA---- 378
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F+ +P + ++ LI A G AL LF
Sbjct: 379 ---------------------------FESMPVKNSWTWTALIKGMATNGRGREALELFS 411
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ--------LHCLAIYCGFDHYASVNNSLLT 172
MR+ + T G++ A S++ CL+++ I +HY V + L
Sbjct: 412 SMRKASIEPTDVTFIGVLMACSHS-CLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLL-- 468
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
R G +DEA + M + V W +++ + H+ + +++VSL
Sbjct: 469 --GRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLN 520
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/541 (41%), Positives = 320/541 (59%), Gaps = 34/541 (6%)
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+N L+ + ++G LD A +VF EM E ++ +WN+MV Q L LF+EM L
Sbjct: 26 HNILINGHVQHGDLDSAIKVFDEMLE-RNVATWNAMVSGLIQFEFNENGLFLFREMHELG 84
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
D +TL S+L L G Q HA+++K G+ N +GS L +Y K SG + +
Sbjct: 85 FLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMK-SGSLGEG 143
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
KV + + ++V WNT+I+G +Q + + L + + G PD + V VIS+ +
Sbjct: 144 EKVIKAMRIRNVVAWNTLIAGNAQNGHF-EGVLDLYNMMKMSGLRPDKITLVSVISSSAE 202
Query: 347 LSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ G+QIHA IK S ++V ++L++MYSKCG LED+ + ++V +S
Sbjct: 203 LATLFQGQQIHAEAIKAGANS-AVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSS 261
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MIA Y HG G EA+ LFE M + + ++TF+S+L AC+H G +G +F +M + +
Sbjct: 262 MIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKY 321
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKA 508
G +P EHY+C++DLLGR+G L +AE +I +MP +A +
Sbjct: 322 GLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRT 381
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A L+L P ++ YV+L+NI+A++ +W++V+ +R MRDR V+K+PG SW+EVK ++
Sbjct: 382 AEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQ 441
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F D SHPM +EI YL+E+ +MK GYVPD KE LV+HSEKLA+A
Sbjct: 442 FSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIA 501
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL++ G PI VMKNLRIC DCH AIK IS I REI VRDT RFH FK G+CSCGDY
Sbjct: 502 FGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDY 561
Query: 677 W 677
W
Sbjct: 562 W 562
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 207/427 (48%), Gaps = 12/427 (2%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
+Y K G + A FN N+ S N+L+ + + + SA ++FD++ + ++ ++N +
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGF 160
+S E+ L LF++M E F D FTL ++ + KQ+H + G+
Sbjct: 61 VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ--HREGLEALQL 218
+ V +SL Y ++G L E ++V M I++ V+WN+++ Q H EG+ L L
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAM-RIRNVVAWNTLIAGNAQNGHFEGV--LDL 177
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
+ M L D TL S++++ L L G Q HA IK+G + + S LI +Y+K
Sbjct: 178 YNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSK 237
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G + D MK + PD VLW++MI+ Y ++A+ F+++ + G +D +F+
Sbjct: 238 C-GCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGR-GEEAVHLFEQMEQEGLGGNDVTFL 295
Query: 339 CVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP- 396
++ ACS N G L ++ R+ +V + + G L++A + MP
Sbjct: 296 SLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPL 355
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
E + V ++++ H A R E +L N P + T+V + + A + + K
Sbjct: 356 EADVVIWKTLLSACRIHRNADMATRTAEEILRLN-PQDSATYVLLSNIHASAKRWKDVSK 414
Query: 457 YFSMMKD 463
+ M+D
Sbjct: 415 VRTTMRD 421
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G R GK +HA LK F+ + + +Y K G L
Sbjct: 91 TLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAM 150
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV ++N TLI+ A G E L L+
Sbjct: 151 RIRNVVAWN-------------------------------TLIAGNAQNGHFEGVLDLYN 179
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ D TL +I++S+ L +Q+H AI G + +V +SL++ YS+ G
Sbjct: 180 MMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCG 239
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+++ + + E D V W+SM+ AYG H G EA+ LF++M LG + T S+L
Sbjct: 240 CLEDSMKALLDC-EHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLL 298
Query: 239 TAFTSLEDLVGGLQFHAHLI-KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + G+ F ++ K G + ++DL + SG + + + +P +
Sbjct: 299 YACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGR-SGCLDEAEAMIRSMPLEA 357
Query: 297 DLVLWNTMISG 307
D+V+W T++S
Sbjct: 358 DVVIWKTLLSA 368
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/768 (32%), Positives = 388/768 (50%), Gaps = 125/768 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G + H L N + ++ N + +YS+CG L
Sbjct: 119 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE--------- 169
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ---PDLVSYNTLISAYADCGDTESALS 117
A +FD+I Q D++S+N+++SA+ + +AL
Sbjct: 170 ----------------------EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 207
Query: 118 LFKDM----REKRFD--TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
LF M EK + +D ++ ++ A S + K++H AI G V N+
Sbjct: 208 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNA 267
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y++ G ++ A +VF M E KD VSWN+MV Y Q A +LF+ M + L
Sbjct: 268 LIDAYAKCGLMENAVKVF-NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL 326
Query: 230 DM-----------------------------------YTLASILTAFTSLEDLVGGLQFH 254
DM T+ S+L+A SL G++ H
Sbjct: 327 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 386
Query: 255 AHLIKS----------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWN 302
A+ +K+ G ++ + + LID+Y+KC + +F++IP + ++V W
Sbjct: 387 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR-SFKAARSIFDDIPLEERNVVTWT 445
Query: 303 TMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
MI G++Q + S+ AL F ++ G P+ + C++ AC++L+ +GKQIHA
Sbjct: 446 VMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 504
Query: 360 IK-IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ + S+ V N L+ MYSKCG+++ AR +FD M + + +S SM+ GY HG G E
Sbjct: 505 LRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 564
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F+ M + P +ITF+ VL AC+H G V +G YF M +G P EHY+ I
Sbjct: 565 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 624
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAV 521
DLL R G+L A + ++ MP P ++ A A N +++ N
Sbjct: 625 DLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 684
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
Y +++NIYA +G+W++VA IR LM+ G++K+PG SW++ +K F D SHP+ +
Sbjct: 685 SYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQ 744
Query: 582 IHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGEPIL 629
I+ LE + ++K GYVP D+E++ LV HSEKLA+A+GLL+T G PI
Sbjct: 745 IYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIR 804
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+A +IS I EI VRD RFH FK+G CSCG YW
Sbjct: 805 ITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 57/357 (15%)
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
V WN ++ + + A+ + M+ LD +TL +L A L G FH
Sbjct: 83 VWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGL 142
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ---PDLVLWNTMISGYSQKEE 313
+ +GF N I + L+ +Y++C G + + +F+EI Q D++ WN+++S + K
Sbjct: 143 ICCNGFESNVFICNALVAMYSRC-GSLEEASMIFDEITQRGIDDVISWNSIVSAHV-KSS 200
Query: 314 YSDQALGCFKKLNRVGYH------PDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRS 366
+ AL F K+ + + D S V ++ AC +L + K++H I+
Sbjct: 201 NAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFL 260
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + V NAL+ Y+KCG +E+A ++F+ M + VS N+M+AGY+Q G A LF+ M
Sbjct: 261 D-VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNM 319
Query: 427 LETNIP-----------------------------------PTNITFVSVLSACAHTGKV 451
+ NIP P +T +SVLSACA G
Sbjct: 320 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAF 379
Query: 452 AEGQK---------YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
++G + ++ D G + + Y+ +ID+ + A + + +P
Sbjct: 380 SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPL 436
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 241/713 (33%), Positives = 368/713 (51%), Gaps = 71/713 (9%)
Query: 1 TFRQVLKTCVGR-RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF +L GR R+L GK +H+ ++ + N + +Y KCG
Sbjct: 118 TFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCG----------- 166
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ A +FD I P++ S+ +I+AYA G L L
Sbjct: 167 --------------------DVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLL 206
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIY-CGFDHYASVNNSLLTCYSR 176
M + DG+T + ++ A + L K LH I G D A+V +L+ Y +
Sbjct: 207 SRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGK 266
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+EA VF ++ + KD VSW+SM+ A+ Q + A+QL M + + T +
Sbjct: 267 CGALEEAFGVFVQI-DNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVN 325
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A TSL+ G + HA ++++G+ + + S L+ +Y G + +FE +
Sbjct: 326 VLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNW-GWVETARSIFESSRER 384
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D+V W++MI+GYSQ E + +AL F+++ G P+ +FV I AC+ + G Q+
Sbjct: 385 DVVSWSSMIAGYSQNESPA-RALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQL 443
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H + + + + V ALV +Y KCG LE+A +F M + N ++ S+ Y Q+G
Sbjct: 444 HERVRCLGLDKD-VPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +L+L M + P I FV++L +C + G++++G Y+++M FG P EH
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCG 562
Query: 476 CMIDLLGRAGKLTDAERLIEAMPF----------------NPGSIALKAANHFLQLEPSN 519
CM+D+LGRAGKL AE+LI M F N + A +AA QLEP N
Sbjct: 563 CMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKN 622
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG--SHP 577
A PYV+L++++ A+G WE RR M RGVQ+ G S IE+ ++H FVA H
Sbjct: 623 ATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHH 682
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSY 624
++ EI LE++ R+M+ AGYVPD KE + +HSE LA+ G++ST
Sbjct: 683 LVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPA 742
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G P+ + KNLR+C DCH A KF+S + R I+VRD R H F++G CSCGDYW
Sbjct: 743 GTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 254/540 (47%), Gaps = 64/540 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLV-----PFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+L C R L GK +H L ++ + P + L N I +Y +CGC A
Sbjct: 16 ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLA------ 69
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+FD++ ++V++ +LISA+ G A+ LF
Sbjct: 70 -------------------------LDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLF 104
Query: 120 KDMREKRFDTDGFTLSGLI---TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ M D T + ++ + NL K++H + G++ V N ++ Y +
Sbjct: 105 RKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGK 164
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A VF + + + SW ++ AY Q+ +E L+L M + D YT +
Sbjct: 165 CGDVEQAGNVFDSIQD-PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTT 223
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+L A T++ L HA I S G +++ +G+ LI+LY KC G + + VF +I
Sbjct: 224 VLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKC-GALEEAFGVFVQIDN 282
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D+V W++MI+ ++Q + + A+ ++ G P++ +FV V+ A ++L GK+
Sbjct: 283 KDIVSWSSMIAAFAQSGQ-AKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKE 341
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHA ++ S+ + + +ALV MY G +E AR +F+ E + VS +SMIAGY+Q+
Sbjct: 342 IHARIVQAGY-SDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNE 400
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
AL LF M + P ++TFVS + ACA G + G + ++ G + +
Sbjct: 401 SPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVR-CLGLDKDVPVA 459
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ +++L G+ G+L +AE + FL ++ N + + +A Y +G
Sbjct: 460 TALVNLYGKCGRLEEAEAV------------------FLGMKKKNLLTWTSIAMAYGQNG 501
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 40/387 (10%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL-----IDLY 276
M + ++ ++ A+ILTA + L L G + H +++ Q+ L I +Y
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
+C G + VF+ + ++V W ++IS ++ + D A+ F+K+ G PD +
Sbjct: 61 LRC-GCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGD-AMVLFRKMLLSGVSPDRIT 118
Query: 337 FVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
F ++ S +L GK++H+ ++ +R+ V N +V MY KCG++E A +FD
Sbjct: 119 FTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRM-VMNLVVEMYGKCGDVEQAGNVFDS 177
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ + N S +IA YAQ+G ME LRL M + + P TF +VL AC G + E
Sbjct: 178 IQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEA 237
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQ 514
+ + G + + + +I+L G+ G L +A + F+Q
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGV------------------FVQ 279
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
++ + V + + +A SG+ + + LM GV+ +++ V + + A
Sbjct: 280 IDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPN-NVTFVNVLEAVTSLKA--- 335
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVPD 601
Y +E+ ++ QAGY D
Sbjct: 336 --------FQYGKEIHARIVQAGYSDD 354
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/641 (36%), Positives = 359/641 (56%), Gaps = 39/641 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR-EKRFDT 129
LL Y++ + AR LFD + +++S+N++I Y+ D A L + M+ E +
Sbjct: 340 LLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKV 398
Query: 130 DGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYAS-VNNSLLTCYSRNGFLDEAKRV 186
+ TL ++ + +K ++H A+ GF V N+ + Y++ G L A+ V
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M E K SWN+++ + Q+ +AL L+ M L D++T+AS+L+A L+
Sbjct: 459 FCGM-ESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKS 517
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G + H ++++GF + I L+ LY +C G + F+ + + +LV WNTMI+
Sbjct: 518 LSCGKEIHGSMLRNGFELDEFICISLVSLYVQC-GKILLAKLFFDNMEEKNLVCWNTMIN 576
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
G+SQ E + AL F ++ PD+ S + + ACS +S LGK++H +K +
Sbjct: 577 GFSQNE-FPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLT 635
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ V +L+ MY+KCG +E ++ +FDR+ V+ N +I GY HG G +A+ LF+
Sbjct: 636 EHSF-VTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKS 694
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M P ++TF+++L+AC H G VAEG +Y M+ +FG +P+ EHY+C++D+LGRAG
Sbjct: 695 MQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAG 754
Query: 486 KLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLAN 528
+L +A L+ +P P S I K AN L+L P A YV+++N
Sbjct: 755 RLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISN 814
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
YA GKW+EV +R+ M++ G+QK G SWIE+ ++ F+ D S +I E
Sbjct: 815 FYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIE 874
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ +K+ + GY PD K K L +HSEKLA++FGLL+T+ G + V KNLRI
Sbjct: 875 LEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRI 934
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCHNAIK +S I REI VRD RFH FK+G CSCGDYW
Sbjct: 935 CVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 243/505 (48%), Gaps = 50/505 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+K CVG D+ G+++H LK V
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVL----------------------------- 228
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++VF N L+A Y + + SA ++FD++PQ +LVS+N+++ A + G E + LFK
Sbjct: 229 --SDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFK 286
Query: 121 DMR--EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ ++ D T+ +I A + L H LA+ G VN+SLL YS+
Sbjct: 287 GLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSK 346
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLA 235
G+L EA RV ++ E K+ +SWNSM+ Y + R+ A +L ++M + ++ ++ TL
Sbjct: 347 CGYLCEA-RVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLL 404
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH-IGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L + + H + ++ GF Q+ + + + YAKC G + VF +
Sbjct: 405 NVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKC-GSLHYAEGVFCGME 463
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGK 353
+ WN +I G+ Q + +AL + + G PD + ++SAC+ L S S GK
Sbjct: 464 SKMVSSWNALIGGHVQN-GFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGK 522
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IH ++ + + +LV++Y +CG + A+ FD M E N V N+MI G++Q+
Sbjct: 523 EIHGSMLRNGFELDEF-ICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQN 581
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEG 471
+AL +F ML + I P I+ + L AC+ + G++ F++ + E
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHL----TEH 637
Query: 472 EHYSC-MIDLLGRAGKLTDAERLIE 495
+C +ID+ + G + ++ + +
Sbjct: 638 SFVTCSLIDMYAKCGCMEQSQNIFD 662
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 142/274 (51%), Gaps = 16/274 (5%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
WN+++ Y ++ +A+ +F EM+SL + D +TL ++ A + D+ G H
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFA 222
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+K+ + +G+ LI +Y K G + +KVF+++PQ +LV WN+++ + + ++
Sbjct: 223 LKTKVLSDVFVGNALIAMYGK-FGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF-EE 280
Query: 318 ALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
+ G FK L G PD + V VI C+ LG H L +K+ + + VN++
Sbjct: 281 SYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGL-CGELKVNSS 339
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LETNIPP 433
L+ MYSKCG L +AR LFD E N +S NSMI GY++ A L M +E +
Sbjct: 340 LLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKV 398
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+T ++VL C E + F +K++ G+
Sbjct: 399 NEVTLLNVLPVC-------EEEIQFLKLKEIHGY 425
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 250 GLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G + H + S QN + + L+ +Y+ C C+ VF + +L LWN ++SGY
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCL-VFNASRRKNLFLWNALLSGY 170
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN 367
+ + D + ++ + PD+ + CVI AC + LG+ +H +K ++ S+
Sbjct: 171 LRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSD 230
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ V NAL+AMY K G +E A ++FD+MP+ N VS NS++ ++G+ E+ LF+ +L
Sbjct: 231 -VFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289
Query: 428 --ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
+ + P T V+V+ CA G+V G + + + G E + S ++D+ + G
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL-GLCGELKVNSSLLDMYSKCG 348
Query: 486 KLTDAERLIEA 496
L +A L +
Sbjct: 349 YLCEARVLFDT 359
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 160/359 (44%), Gaps = 47/359 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C + L GK +H L+N ++ + LY +CG
Sbjct: 504 TIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCG------------ 551
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+I A+ FD + + +LV +NT+I+ ++ AL +F
Sbjct: 552 -------------------KILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFH 592
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + D ++ G + A S + L L K+LHC A+ ++ V SL+ Y++ G
Sbjct: 593 QMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCG 652
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++++ +F + +K EV+WN ++ YG H G +A++LF+ M + D T ++L
Sbjct: 653 CMEQSQNIFDRV-HLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALL 711
Query: 239 TAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
TA + GL++ + G + ++D+ + +G + + +++ E+P +P
Sbjct: 712 TACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGR-AGRLNEALELVNELPDKP 770
Query: 297 DLVLWNTMISGYSQKEEYSDQALG--CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
D +W++++S Y D +G KL +G PD +I SN LGK
Sbjct: 771 DSRIWSSLLSSC---RNYRDLDIGEKVANKLLELG--PDKAENYVLI---SNFYARLGK 821
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G++IH N + + LV MYS C + D+ +F+ N N++++GY
Sbjct: 111 IGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGY 170
Query: 411 AQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGF 467
++ + +A+ +F M+ T P N T V+ AC V G+ F++ +
Sbjct: 171 LRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSD 230
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G + +I + G+ G + A ++ + MP
Sbjct: 231 VFVG---NALIAMYGKFGFVESAVKVFDKMP 258
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/674 (34%), Positives = 373/674 (55%), Gaps = 61/674 (9%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
++ + GC+ A F+ + FS+ ++L+ YAR +++A+ +FD++P+ L S+ L
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL 60
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
+SA+A G E A +LF M+E+ D +T+ + A+ +N+ K FD
Sbjct: 61 LSAFALSGHHEEAKTLFDTMQER--DLIAWTIMLTVLATFSNIEDAKY--------HFDQ 110
Query: 163 YASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
+ ++L + G ++ A+ F +M E ++ SW S++ AYG+ + A ++
Sbjct: 111 MPERDLVAWTAMLAANAERGQMENARETFDQMPE-RNLFSWTSLLSAYGRSGDVKAAGRV 169
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F M L ++LT ++ L G + S ++ + ++ YA
Sbjct: 170 FDSMPEWNL----VAWTAMLTGYS----LSGDVVRAKRAFDSMPERDLIAWTAMLSAYA- 220
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR-----VGYHPD 333
+G +R ++F+ +P+ DL+ W TM++ + + +++ F ++ R G P+
Sbjct: 221 FNGHLRYTREIFQRMPERDLISWATMVAALVEND-LLEESKELFDRMPRHCALSKGMTPN 279
Query: 334 DCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+F+ ++ ACS L + G++IHA + ++ + V+NALV Y +CG L DA+ +F
Sbjct: 280 RVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLV-VSNALVNFYGRCGALGDAKIVF 338
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
D M + +S +SMI+ +AQ G EA+ L+ ML P +I F+SVL AC+++G V
Sbjct: 339 DGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVE 398
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-------- 504
+F + EP EHY+CM+D+LGRAGKL DAE L+ MPF+PG +
Sbjct: 399 ASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSA 458
Query: 505 ---------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
AA +L+P N+ PY+ LANIY+A+ + ++ A IR+LM +RG++KKP
Sbjct: 459 CKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKP 518
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KE 603
G SWIEV ++H F+A D HP EI+ ++ + R+MK+AGY D KE
Sbjct: 519 GCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKE 578
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
L +HSEKLA+AFGL+ST G P+ ++KNLR+C DCH A K IS + GREI VRDT RF
Sbjct: 579 NLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRF 638
Query: 664 HCFKDGRCSCGDYW 677
H F++G CSC DYW
Sbjct: 639 HHFQNGMCSCNDYW 652
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G+ +HA + +SN + Y +CG L A F+
Sbjct: 282 TFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGM 341
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S++ +++A+A++ R+ A +L+ ++ PD + + +++ A ++ G E++
Sbjct: 342 RRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASG 401
Query: 117 SLFKDM 122
F+ +
Sbjct: 402 DFFRSI 407
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 349/653 (53%), Gaps = 44/653 (6%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
VF N+L+ Y + RI AR LF+ + D VS+N+LI+ YA G E L L M
Sbjct: 145 VFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHH 204
Query: 125 KRFDTDGFTLSGLITAS----SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ FTL + + +N + K LH + G D V +LL Y++ G+L
Sbjct: 205 TGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYL 264
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----GLEALQLFQEMVSLQLGLDMYTLA 235
+A ++F ++ V +N+M+ + Q + EAL+LF +M + +T +
Sbjct: 265 GDAIQLF-RTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFS 323
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SI+ +E G Q HAH+ K + IGS LI+LY+ G D +K F P+
Sbjct: 324 SIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLL-GSTEDQLKCFNSTPK 382
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQ 354
D+V W TMI+GY+Q ++ + AL F +L G PD+ ++SAC++++ G+Q
Sbjct: 383 LDIVSWTTMIAGYAQNGQF-ESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQ 441
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K I + I V N+ ++MY+K GNL+ A+ F+ + + VS + MI AQHG
Sbjct: 442 VHGYAVKTGIGTLAI-VQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHG 500
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+A+ LFE M I P ITF+ VL+AC+H G V EG +Y+ MK + + +H
Sbjct: 501 HAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHC 560
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEP 517
+C++DLL RAG+L DA+ I F + + A ++L+P
Sbjct: 561 TCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDP 620
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ YV+L NIY +G IR LM+DRG++K+PG SWIEV ++H FV D SHP
Sbjct: 621 QESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHP 680
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPDKEKRLV-------------HHSEKLAVAFGLLSTSY 624
M + I+ LE M K ++ GY+ K + + HHSEKLAV+FG++S
Sbjct: 681 MSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPP 740
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ VMKNLR+C DCH +K IS + REI +RD+ RFH FK+G CSC DYW
Sbjct: 741 SAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 211/391 (53%), Gaps = 12/391 (3%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y++ + +A++LFD++ + ++SYN LIS Y G A+ LF + R D F+
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 135 SGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
+G+++A + L K +H LAI CG + N L+ Y + +D A R+ +E +
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHA-RLLFESSD 172
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL-TAFTSLEDLVG-G 250
D VSWNS++ Y + E L+L +M L L+ +TL S L + + +L ++V G
Sbjct: 173 ELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG 232
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
H + +K G + +G+ L+D+YAK +G + D +++F P ++V++N MI+G+ Q
Sbjct: 233 KTLHGYTVKQGLDLDIVVGTALLDMYAK-TGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 311 KE----EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
E E + +AL F ++ R G P D +F +I C+++ GKQIHA K I+
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + + L+ +YS G+ ED + F+ P+ + VS +MIAGYAQ+G AL LF
Sbjct: 352 SDEF-IGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYE 410
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+L + P ++LSACA G++
Sbjct: 411 LLASGKKPDEFIITTMLSACADVAAERSGEQ 441
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 17/253 (6%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
HAH+IK+ F+ + + ++LY+K G+M + K+F+ + + ++ +N +ISGY
Sbjct: 32 HAHMIKTAFNPCLFLLNNFLNLYSKW-GEMGNAQKLFDRMSERSVISYNILISGYGGMGF 90
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
Y +A+G F + D S+ V+SAC + +LGK IH L I + ++ +
Sbjct: 91 YH-KAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGL-GQQVFLT 148
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ MY KC ++ AR LF+ E + VS NS+I GYA+ G E L+L M T +
Sbjct: 149 NLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLR 208
Query: 433 PTNITFVSVLSAC-------AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
T S L +C GK G +++ + G + + + ++D+ + G
Sbjct: 209 LNAFTLGSALKSCYLNLNNMVSYGKTLHG---YTVKQ---GLDLDIVVGTALLDMYAKTG 262
Query: 486 KLTDAERLIEAMP 498
L DA +L P
Sbjct: 263 YLGDAIQLFRTSP 275
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 49/317 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C GK +HA K+ + ++ + I LYS G FN T
Sbjct: 321 TFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNST 380
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S+ ++A YA+ + SA LF ++ +PD T++SA AD S
Sbjct: 381 PKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSG- 439
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+Q+H A+ G A V NS ++ Y++
Sbjct: 440 --------------------------------EQVHGYAVKTGIGTLAIVQNSQISMYAK 467
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G LD AK F E+ D VSW+ M+ + QH +A+ LF+ M S + + T
Sbjct: 468 SGNLDSAKITFEEIKN-PDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLG 526
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKV-----F 290
+LTA + + GL+++ + K N + ++DL ++ +G + D F
Sbjct: 527 VLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSR-AGRLLDAKNFILNSGF 585
Query: 291 EEIPQPDLVLWNTMISG 307
+ P V+W T++SG
Sbjct: 586 GDHP----VMWRTLLSG 598
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/768 (32%), Positives = 388/768 (50%), Gaps = 125/768 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G + H L N + ++ N + +YS+CG L
Sbjct: 12 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE--------- 62
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ---PDLVSYNTLISAYADCGDTESALS 117
A +FD+I Q D++S+N+++SA+ + +AL
Sbjct: 63 ----------------------EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALD 100
Query: 118 LFKDM----REKRFD--TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
LF M EK + +D ++ ++ A S + K++H AI G V N+
Sbjct: 101 LFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNA 160
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y++ G ++ A +VF M E KD VSWN+MV Y Q A +LF+ M + L
Sbjct: 161 LIDAYAKCGLMENAVKVF-NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL 219
Query: 230 DM-----------------------------------YTLASILTAFTSLEDLVGGLQFH 254
DM T+ S+L+A SL G++ H
Sbjct: 220 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279
Query: 255 AHLIKS----------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWN 302
A+ +K+ G ++ + + LID+Y+KC + +F++IP + ++V W
Sbjct: 280 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS-FKAARSIFDDIPLEERNVVTWT 338
Query: 303 TMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
MI G++Q + S+ AL F ++ G P+ + C++ AC++L+ +GKQIHA
Sbjct: 339 VMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 397
Query: 360 IK-IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ + S+ V N L+ MYSKCG+++ AR +FD M + + +S SM+ GY HG G E
Sbjct: 398 LRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 457
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F+ M + P +ITF+ VL AC+H G V +G YF M +G P EHY+ I
Sbjct: 458 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 517
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAV 521
DLL R G+L A + ++ MP P ++ A A N +++ N
Sbjct: 518 DLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 577
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
Y +++NIYA +G+W++VA IR LM+ G++K+PG SW++ +K F D SHP+ +
Sbjct: 578 SYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQ 637
Query: 582 IHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGEPIL 629
I+ LE + ++K GYVP D+E++ LV HSEKLA+A+GLL+T G PI
Sbjct: 638 IYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIR 697
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+A +IS I EI VRD RFH FK+G CSCG YW
Sbjct: 698 ITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 200/496 (40%), Gaps = 102/496 (20%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
LD +TL +L A L G FH + +GF N I + L+ +Y++C G + +
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC-GSLEEASM 66
Query: 289 VFEEIPQ---PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH------PDDCSFVC 339
+F+EI Q D++ WN+++S + K + AL F K+ + + D S V
Sbjct: 67 IFDEITQRGIDDVISWNSIVSAHV-KSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 125
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
++ AC +L K++H I+ + + V NAL+ Y+KCG +E+A ++F+ M
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLD-VFVGNALIDAYAKCGLMENAVKVFNMMEFK 184
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP-------------------------- 432
+ VS N+M+AGY+Q G A LF+ M + NIP
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244
Query: 433 ---------PTNITFVSVLSACAHTGKVAEGQKYFS--------MMKDMFGFEPEGEH-Y 474
P +T +SVLSACA G ++G + + + + FG E E Y
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ +ID+ + A + + +P LE N V + ++ +A G
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIP----------------LEERNVVTWTVMIGGHAQYG 348
Query: 535 KWEEVATIRRLMRDRGVQKKPG-------------FSWIEVKKQMHVFVAE----DGSHP 577
+ + M P + I + KQ+H +V D S
Sbjct: 349 DSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAY 408
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVM 631
+ N L M K G V S+K A+++ + T YG E + +
Sbjct: 409 FVA---NCLINMYSK---CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 462
Query: 632 KNLRICGDCHNAIKFI 647
+R G + I F+
Sbjct: 463 DKMRKAGFVPDDITFL 478
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 317/537 (59%), Gaps = 39/537 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y + L++A ++F +M + ++ +SW +M+ AY + + +AL+L M+ +
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDGV 110
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
++YT +S+L A + D+ H +IK G + ++ S LID++AK G+ D +
Sbjct: 111 RPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKL-GEPEDAL 166
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+E+ D ++WN++I G++Q SD AL FK++ R G+ + + V+ AC+ L
Sbjct: 167 SVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELFKRMKRAGFIAEQATLTSVLRACTGL 225
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LG Q H +K + + +NNALV MY KCG+LEDARR+F++M E + ++ ++M
Sbjct: 226 ALLELGMQAHVHIVKYD---QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTM 282
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G AQ+G EAL+LFE M + P IT V VL AC+H G + +G YF MK ++G
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 342
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AA 509
P EHY CMIDLLG+AGKL DA +L+ M P ++ + AA
Sbjct: 343 INPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 402
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ L+P +A Y +L+NIYA S KW+ V IR+ MRD G++K+PG SWIEV KQ+H F
Sbjct: 403 KKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAF 462
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAF 617
+ D SHP I E++ L ++ ++ GYVP+ E L HHSEKLA+AF
Sbjct: 463 IIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 522
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
GL++ + I + KNLRICGDCH K S + R I +RD R+H F+DG+CSCG
Sbjct: 523 GLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 188/365 (51%), Gaps = 11/365 (3%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L H FN Q +F NVL+ Y + + A QLFDQ+PQ +++S+ T+ISAY+
Sbjct: 32 GNLICRHLYFNGHQ-PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 90
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
C + AL L M + +T S ++ A N + ++ LHC I G + V
Sbjct: 91 KCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA-CNGMSDVRMLHCGIIKEGLESDVYVR 149
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ +++ G ++A VF EM D + WNS++ + Q+ AL+LF+ M
Sbjct: 150 SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 208
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ TL S+L A T L L G+Q H H++K + Q+ + + L+D+Y KC G + D
Sbjct: 209 IAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC-GSLEDAR 265
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++ + D++ W+TMISG +Q YS +AL F+ + G P+ + V V+ ACS+
Sbjct: 266 RVFNQMKERDVITWSTMISGLAQN-GYSQEALKLFELMKSSGTKPNYITIVGVLFACSHA 324
Query: 348 SPSLGKQIHALTIK--IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLN 404
+ ++K I R ++ + K G L+DA +L + M E + V+
Sbjct: 325 GLLEDGWYYFRSMKKLYGINPGR-EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 383
Query: 405 SMIAG 409
+++
Sbjct: 384 TLLGA 388
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 48/234 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G H +K L+N + +Y KCG L A FNQ
Sbjct: 214 TLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQM 271
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V ++++T+IS A G ++ AL LF+
Sbjct: 272 KERDV-------------------------------ITWSTMISGLAQNGYSQEALKLFE 300
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL---------IKQLHCLAIYCGFDHYASVNNSLL 171
M+ + T+ G++ A S+ L +K+L+ I G +HY ++
Sbjct: 301 LMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY--GINPGREHYG----CMI 354
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ G LD+A ++ EM D V+W +++ A R + A +++++L
Sbjct: 355 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 408
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 328/544 (60%), Gaps = 39/544 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
++NSL+ Y + G + +A+RVF M +D SW S++ Y Q+ EAL L M+
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGM-PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +T AS+L A + G Q HA +K +H + ++GS L+D+YA+C G M
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARC-GRMDM 218
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+ VF+++ + V WN +I+G+++K + + L F ++ R G+ ++ V SA +
Sbjct: 219 AIAVFDQLESKNGVSWNALIAGFARKGD-GETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRIS--VNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+ GK +HA IK R+S V N ++ MY+K G++ DAR++FDR+ + + V+
Sbjct: 278 GIGALEQGKWVHAHMIK---SGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVT 334
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
NSM+ +AQ+G+G EA+ FE M + + ITF+S+L+AC+H G V EG++YF MMK
Sbjct: 335 WNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMK 394
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIA 505
+ + EPE +HY ++DLLGRAG L DA I MP P I
Sbjct: 395 E-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
AA+H +L+P + P V+L NIYA++G+W+ A +R++M+ GV+K+P SW+E++
Sbjct: 454 QFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENS 513
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKL 613
+H+FVA D +HP +EI+ EE+S ++++AGYVP +++ +L +HSEK+
Sbjct: 514 VHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKI 573
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AF L++ G I +MKN+RICGDCH+A ++IS + REI VRDT RFH F G CSC
Sbjct: 574 ALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSC 633
Query: 674 GDYW 677
GDYW
Sbjct: 634 GDYW 637
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 143/266 (53%), Gaps = 15/266 (5%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S++TA L HAHL S F + + + LI LY KC G + D +VF+ +P
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKC-GAVADARRVFDGMPA 127
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQ 354
D+ W ++I+GY+Q + D+ALG + R + P+ +F ++ A ++ S +G+Q
Sbjct: 128 RDMCSWTSLIAGYAQN-DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHALT+K + + + V +AL+ MY++CG ++ A +FD++ N VS N++IAG+A+ G
Sbjct: 187 IHALTVKYDWHDD-VYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G L +F M T+ T+ SV SA A G + +G+ + M GE
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK------SGERL 299
Query: 475 SC-----MIDLLGRAGKLTDAERLIE 495
S ++D+ ++G + DA ++ +
Sbjct: 300 SAFVGNTILDMYAKSGSMIDARKVFD 325
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 8/276 (2%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H +V+ + LL YAR R+ A +FDQ+ + VS+N LI+ +A GD E+ L +F +
Sbjct: 197 HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAE 256
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ F+ FT S + +A + L K +H I G A V N++L Y+++G
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 316
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A++VF + + KD V+WNSM+ A+ Q+ G EA+ F+EM + L+ T SILT
Sbjct: 317 MIDARKVFDRVDK-KDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
A + + G Q+ + + ++DL + +G + D + ++P +P
Sbjct: 376 ACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGR-AGLLNDALVFIFKMPMKPTA 434
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+W ++ + + +G F + PDD
Sbjct: 435 AVWGALLGSCRM---HKNAKIGQFAADHVFELDPDD 467
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 42/329 (12%)
Query: 340 VISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+I+AC+ S + IHA + + + ++N+L+ +Y KCG + DARR+FD MP
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQF-AGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ S S+IAGYAQ+ + EAL L ML P TF S+L A + G++
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
++ + + + S ++D+ R G++ A IA+ F QLE
Sbjct: 189 ALTVK-YDWHDDVYVGSALLDMYARCGRMDMA-------------IAV-----FDQLESK 229
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK-----------PGFSWIEVKKQMH 567
N V + L +A G E + M+ G + G +E K +H
Sbjct: 230 NGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVH 289
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG-- 625
+ + G + + N + +M K +G + D K +K V + + T++
Sbjct: 290 AHMIKSGER-LSAFVGNTILDMYAK---SGSMIDARKVFDRVDKKDVVTWNSMLTAFAQY 345
Query: 626 ----EPILVMKNLRICGDCHNAIKFISAI 650
E + + +R CG N I F+S +
Sbjct: 346 GLGREAVTHFEEMRKCGVHLNQITFLSIL 374
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 324/544 (59%), Gaps = 36/544 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ L+ Y + L +A+ VF M E ++ VSW +M+ AY Q +AL LF +M+
Sbjct: 95 LRTRLIVFYVKCDSLRDARHVFDVMPE-RNVVSWTAMISAYSQRGYASQALSLFVQMLRS 153
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A++LT+ V G Q H+H+IK + + ++GS L+D+YAK G + +
Sbjct: 154 GTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAK-DGKIHE 212
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+F+ +P+ D+V +ISGY+Q ++AL F++L R G + ++ V++A S
Sbjct: 213 ARGIFQCLPERDVVSCTAIISGYAQLG-LDEEALELFRRLQREGMQSNYVTYTSVLTALS 271
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ GKQ+H ++ E+ S + + N+L+ MYSKCGNL ARR+FD + E +S N
Sbjct: 272 GLAALDHGKQVHNHLLRSEVPSY-VVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWN 330
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQK-YFSMMK 462
+M+ GY++HG G E L LF M++ N + P ++T ++VLS C+H G +G ++ M
Sbjct: 331 AMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTS 390
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
+P+ +HY C++D+LGRAG++ A ++ MPF P + I
Sbjct: 391 GKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIG 450
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+ LQ+EP NA YV+L+N+YA++G+WE+V ++R LM + V K+PG SWIE+ +
Sbjct: 451 EFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQV 510
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D SHP +E+ ++E+S + K+AGYVPD KEK L+ HSEKL
Sbjct: 511 LHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKL 570
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+ FGL++T PI V+KNLRIC DCHN K+ S I GRE+++RD RFH G+CSC
Sbjct: 571 ALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSC 630
Query: 674 GDYW 677
GDYW
Sbjct: 631 GDYW 634
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 175/403 (43%), Gaps = 80/403 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C+G V G+ +H+ H
Sbjct: 161 TFATVLTSCIGSSGFVLGRQIHS-------------------------------HIIKLN 189
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A+V+ + LL YA+ +I AR +F +P+ D+VS +IS YA G E AL LF+
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + ++ T + ++TA S L KQ+H + Y + NSL+ YS+ G
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASI 237
L A+R+F + E + +SWN+M+V Y +H EG E L+LF M+ ++ D T+ ++
Sbjct: 310 NLTYARRIFDTLHE-RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAV 368
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L+ + GGL+ G+ Y SG + QPD
Sbjct: 369 LSGCSH-----GGLE----------------DKGMDIFYDMTSGKIS---------VQPD 398
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-----NLSPSLG 352
+ ++ + + + F+ + ++ + P + C++ ACS ++ +G
Sbjct: 399 SKHYGCVVDMLGR----AGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVG 454
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
Q+ L I+ E N + ++N +Y+ G ED R L + M
Sbjct: 455 HQL--LQIEPENAGNYVILSN----LYASAGRWEDVRSLRNLM 491
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+++HA IK + + L+ Y KC +L DAR +FD MPE N VS +MI+ Y+
Sbjct: 77 GQRVHAHMIKTHYLPC-VYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYS 135
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q G +AL LF ML + P TF +VL++C + G++ S + + +E
Sbjct: 136 QRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKL-NYEAHV 194
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
S ++D+ + GK+ +A + + +P + V + + YA
Sbjct: 195 YVGSSLLDMYAKDGKIHEARGIFQCLP------------------ERDVVSCTAIISGYA 236
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
G EE + R ++ G+Q ++ V + A D K++HN+L
Sbjct: 237 QLGLDEEALELFRRLQREGMQSNY-VTYTSVLTALSGLAALDHG----KQVHNHL 286
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/663 (35%), Positives = 371/663 (55%), Gaps = 56/663 (8%)
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR--EK 125
+N L+ Y + + A QLF++I + D+VS+N +I+A G+ E+AL LF+ M E
Sbjct: 262 WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEP 321
Query: 126 RFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ T L++A S + L +++H + S+ NSL+T YS+ + +A
Sbjct: 322 PVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKA 381
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT- 242
+ +F + ++D +SWNSM+ Y Q+ + +F+ M+ + D ++L I A +
Sbjct: 382 REIFERL-LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR 440
Query: 243 ---SLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L G + H ++++ + + + + ++ +YAK + + D K+F+ + D
Sbjct: 441 DSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFN-RIADAEKIFKGMKNRD 499
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIH 356
WN M+ GYS+ ++ D L F + + G+ D S ++++C L S LGKQ H
Sbjct: 500 SYSWNAMMDGYSRNAKFED-VLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFH 558
Query: 357 ALTIKI------EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
A+ K+ + + +S+NNAL++MYSKCG+++DA ++F +M + S +MI G
Sbjct: 559 AVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGC 618
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A HG+ +EAL+LFE M I P +TF+++L ACAH G V EG YF M + +G P
Sbjct: 619 AHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPS 678
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIE--AMPFNPG---------------------SIALK 507
EHY+CMIDL GR+G+ A+ L+E F P + ++
Sbjct: 679 IEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVE 738
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA L+LEP + Y++LAN+YA+SG WE+ +R+ MRD+G++K+ G SWI+ + H
Sbjct: 739 AATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRH 798
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAV 615
VFVA D HP KEI+ L +++ ++ GYVP +KE L HSEKLAV
Sbjct: 799 VFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAV 858
Query: 616 AFGLLSTSYGEPIL-VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+FGLL+ G ++ VMKNLR+C DCH+ +KF S + REI +RD+ RFH F+DG CSCG
Sbjct: 859 SFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCG 918
Query: 675 DYW 677
DYW
Sbjct: 919 DYW 921
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 243/442 (54%), Gaps = 22/442 (4%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L + + R+ A+QLFD P D++S++ LI+AY+ CG+ A LF+ M + +
Sbjct: 61 FLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPN 120
Query: 131 GFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
GF+L+ L ++ S+ + L +QLH +I GF + + + +T YSR G L++A+RVF
Sbjct: 121 GFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFD 180
Query: 189 EMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLED 246
E + D + WNS++ AY H +E L+LF +MVS+ + T AS++ A S +
Sbjct: 181 ETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGE 240
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G H +IK+G + +++ + L+ Y KC G+++ ++FE I + D+V WN MI+
Sbjct: 241 EKYGAMVHGRIIKAGL-EATNLWNSLVTFYGKC-GNLQHASQLFERISRKDVVSWNAMIA 298
Query: 307 GYSQKEEYSDQALGCFKKLNRV--GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
Q+ E + ALG F+++ +V P+ +F+ ++SA S LS G++IHA ++
Sbjct: 299 ANEQRGE-GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLS 357
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + S+ N+L+ YSKC + AR +F+R+ + +S NSM+AGY Q+ +F
Sbjct: 358 LEVD-TSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIF 416
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF-----EPEGEHYS--- 475
+ M+ + I P + + + +A + + + G YF K++ G+ P G S
Sbjct: 417 KRMMLSGIEPDSHSLTIIFNAAS---RDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSN 473
Query: 476 CMIDLLGRAGKLTDAERLIEAM 497
++ + + ++ DAE++ + M
Sbjct: 474 AILKMYAKFNRIADAEKIFKGM 495
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 167/357 (46%), Gaps = 41/357 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L G L G+ +HA + + ++N I YSKC + A F +
Sbjct: 329 TFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERL 388
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S+N +LA Y + + +F ++ +PD S + +A + S L
Sbjct: 389 LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAAS---RDSSGL 445
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ +E G+ L IT +L SV+N++L Y++
Sbjct: 446 IYFRRGKE----IHGYILR-RITPGGVSL-------------------SVSNAILKMYAK 481
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+ +A+++F M +D SWN+M+ Y ++ + + L +F +++ LD +L+
Sbjct: 482 FNRIADAEKIFKGMKN-RDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSI 540
Query: 237 ILTAFTSLEDLVGGLQFHAHLIK-----SGFHQNS--HIGSGLIDLYAKCSGDMRDCMKV 289
+LT+ L L G QFHA + K HQ+S I + LI +Y+KC G ++D +V
Sbjct: 541 LLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKC-GSIKDAAQV 599
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
F ++ + D+ W MI+G + + +AL F+++ G P+ +F+ ++ AC++
Sbjct: 600 FLKMERKDVFSWTAMITGCAH-HGLAVEALQLFERMKTDGIKPNQVTFLALLMACAH 655
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/655 (36%), Positives = 361/655 (55%), Gaps = 67/655 (10%)
Query: 85 RQLFDQIPQ-----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
+QL QI + P +++ +I YA G +L+ F +R D L+
Sbjct: 25 KQLHAQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLR 84
Query: 140 ASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-------------------NG 178
AS+ + L + LH I GF N+L+ YS+ N
Sbjct: 85 ASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNK 144
Query: 179 F---LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ +D +++F M ++D VSWN+++ Q+ EAL + +EM L D +TL+
Sbjct: 145 YSVKIDSVRKLFDRM-PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLS 203
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG-DMRDCMKVFEEIP 294
SIL FT ++ G + H + I+ GF ++ IGS LID+YAKC+ ++ C F +
Sbjct: 204 SILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVC--AFHLLS 261
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
D + WN++I+G Q + DQ LG F+++ + P SF VI AC++L+ +LGK
Sbjct: 262 NRDAISWNSIIAGCVQNGRF-DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGK 320
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR--MPEHNTVSLNSMIAGYA 411
Q+HA I++ N+ + ++L+ MY+KCGN++ AR +F++ M + + VS ++I G A
Sbjct: 321 QLHAYIIRLGFDDNKF-IASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCA 379
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG ++A+ LFE ML + P + F++VL+AC+H G V EG KYF+ M+ FG P
Sbjct: 380 MHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGL 439
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHFLQ 514
EHY+ + DLLGRAG+L +A I M P GS+ A K N L
Sbjct: 440 EHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILL 499
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
++P N +V+++NIY+A+ +W + A +R MR G++K P SWIEV ++H F+A D
Sbjct: 500 VDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDK 559
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLST 622
SHP +I+ L + +M++ GYV D K L HSE+LA+AFG++ST
Sbjct: 560 SHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIIST 619
Query: 623 SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G I V+KN+R+C DCH AIKF++ I GREI VRD RFH FK+G CSCGDYW
Sbjct: 620 TSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 179/349 (51%), Gaps = 16/349 (4%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L+ + +SLHA ++ F Y +N + +YSK + H F Q +
Sbjct: 79 FPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQAR 138
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H + ++V +I S R+LFD++P D+VS+NT+I+ A G E AL++ K+
Sbjct: 139 HNHNNKYSV---------KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKE 189
Query: 122 MREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M ++ D FTLS + I N+ K++H AI GFD + +SL+ Y++
Sbjct: 190 MGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQ 249
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ + F+ + +D +SWNS++ Q+ + L F+ M+ ++ + +S++
Sbjct: 250 VELSVCAFHLLSN-RDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIP 308
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPD 297
A L L G Q HA++I+ GF N I S L+D+YAKC G+++ +F +I D
Sbjct: 309 ACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKC-GNIKMARYIFNKIEMCDRD 367
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+V W +I G + D A+ F+++ G P +F+ V++ACS+
Sbjct: 368 MVSWTAIIMGCAMHGHALD-AVSLFEEMLVDGVKPCYVAFMAVLTACSH 415
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 36/244 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L ++ GK +H +++ ++ + I +Y+KC T
Sbjct: 201 TLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKC------------T 248
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q V L+ A F + D +S+N++I+ G + L F+
Sbjct: 249 Q--------VELSVCA-----------FHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFR 289
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M +++ + S +I A ++ L L KQLH I GFD + +SLL Y++ G
Sbjct: 290 RMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCG 349
Query: 179 FLDEAKRVF--YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+ A+ +F EM + +D VSW ++++ H L+A+ LF+EM+ + +
Sbjct: 350 NIKMARYIFNKIEMCD-RDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMA 408
Query: 237 ILTA 240
+LTA
Sbjct: 409 VLTA 412
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F V+ C L GK LHA ++ + ++++ + +Y+KCG + A + FN+
Sbjct: 302 SFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKI 361
Query: 61 Q--HANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTES 114
+ ++ S+ ++ A A LF+++ +P V++ +++A + G +
Sbjct: 362 EMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDE 421
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
F M+ + G +HYA+V + L
Sbjct: 422 GWKYFNSMQRD----------------------------FGVAPGLEHYAAVADLL---- 449
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
R G L+EA MGE W++++ A H+ ++L +++V+ L +D
Sbjct: 450 GRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKN----IELAEKVVNKILLVD 501
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/656 (34%), Positives = 368/656 (56%), Gaps = 59/656 (8%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++L +C+ R + +HA L ++ N I +Y KC CL A F++
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N F++N L++ + + A +LF +P+PD S+N+++S +A E +L F
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + F + ++ ++A + +L + Q+H L + + ++L+ YS+ G
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+ VF M E ++ V+WNS++ Y Q+ EAL++F M+ L D TLAS+++
Sbjct: 198 VACAEEVFSGMIE-RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVS 256
Query: 240 AFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCS------------------ 280
A SL L GLQ HA ++K+ F + +G+ L+D+YAKCS
Sbjct: 257 ACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVV 316
Query: 281 ------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
++ +F ++ Q ++V WN +I+GY+Q E +++AL F+ L R
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGE-NEEALRLFRLLKRE 375
Query: 329 GYHPDDCSFVCVISACSNLSPSL-GKQIHALTIK--IEIRS---NRISVNNALVAMYSKC 382
P +F ++SAC+NL+ L G+Q H +K E +S + I V N+L+ MY KC
Sbjct: 376 SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKC 435
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G++ED R+F++M E + VS N++I GYAQ+G G EAL++F ML P ++T + VL
Sbjct: 436 GSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 495
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
AC+H G V EG+ YF M++ G P +HY+CM+DLLGRAG L +A+ LIEAMP NP
Sbjct: 496 CACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPD 554
Query: 503 SIAL-----------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ AA L+++P N+ PYV+L+N+YA G+W +V +R+L
Sbjct: 555 AVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKL 614
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
MR +GV K+PG SWIEV+ ++HVF+ +D SHP K+I++ L+ ++ +MK+ GY+PD
Sbjct: 615 MRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 325 LNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
L R Y P+ F ++ +C + G ++ I + S I + N L+ +Y KC
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L+DAR+LFDRMP+ NT + NS+I+ + G EA RLF M E P ++ S++S
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSMVSG 121
Query: 445 CAHTGKVAEGQKYFSMM 461
A + E +YF M
Sbjct: 122 FAQHDRFEESLEYFVKM 138
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/657 (35%), Positives = 361/657 (54%), Gaps = 65/657 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F I +P+ + +NT++ YA D SAL L+ M + +T L+ A
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + G++ V+ SL++ Y++NG L++A +VF
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ +KD VSWN+M+ Y + EAL+LF+EM+ + D
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ ++L+A + G Q H+ + GF N I + LIDLY+KC G + +FE
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC-GQVETACGLFE 257
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D+V WNT+I GY+ Y +AL F+++ R G P+D + V ++ AC++L
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + K++ +N S+ +L+ MY+KCG++E A ++F+ M + S N+MI G
Sbjct: 317 IGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG LF M + I P +ITFV +LSAC+H+GK+ G+ F M + P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDLLG +G +A+ +I+ MP P + LKA A +
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N YV+L+NIYA +G+W+EVA +R L+ +G++K PG S IE+ ++H F+
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFGL+
Sbjct: 557 DKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 616
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + ++KNLR+C +CH A K +S I REI RD RFH F+DG CSC D+W
Sbjct: 617 STKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 251/746 (33%), Positives = 378/746 (50%), Gaps = 104/746 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +L C+ +L G +HAL +K +++N I LY KCGCL A H
Sbjct: 205 SFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIH----- 259
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LFD++PQ D+ S+NT+IS+ E AL LF+
Sbjct: 260 --------------------------LFDEMPQRDIASWNTMISSLVKGLSYEKALELFR 293
Query: 121 DMRE-KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + K F D FTLS L+TA + I +++H AI G ++ SV+N+++ Y+R
Sbjct: 294 VLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRC 353
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ----------------------------- 208
G L+ +F M ++D ++W M+ AY +
Sbjct: 354 GSLNHVAALFERM-PVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGF 412
Query: 209 --HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ EGL+AL LF MV L +TL ++ A L L Q H +IK GF N+
Sbjct: 413 CKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNA 472
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQP--DLVLWNTMISGYSQKEEYSDQALGCFKK 324
I + LID+ +KC G M D ++F+ + + ++ +MI GY+ + ++A+ F +
Sbjct: 473 CIEAALIDMCSKC-GRMDDADRMFQSLSTDGGNSIIQTSMICGYA-RNGLPEEAICLFYR 530
Query: 325 LNRVGYHP-DDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
G D+ +F ++ C L +GKQIH +K + + V N++++MYSKC
Sbjct: 531 CQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHA-ELGVGNSIISMYSKC 589
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
N++DA + F+ MP H+ VS N +IAG H G EAL ++ M + I P ITFV ++
Sbjct: 590 YNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIV 649
Query: 443 SACAHTGK--VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
SA T + E + F MK + EP EHY+ ++ +LG G L +AE LI MPF+
Sbjct: 650 SAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFD 709
Query: 501 P-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P SI + A H + +EP + YV+++N+YAASG+W +R
Sbjct: 710 PEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVR 769
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-- 601
MRDRG++K P SW+ +KKQ+H F A D SHP +I++ L+ + K +AGY PD
Sbjct: 770 ENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMS 829
Query: 602 ----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
K+ L +HS KLA +GLL T GEPI V+KN+ +C DCH +K+ + +
Sbjct: 830 FVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVT 889
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI RD FHCF +G+CSC YW
Sbjct: 890 QREIIFRDASGFHCFSNGQCSCKGYW 915
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 219/468 (46%), Gaps = 43/468 (9%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N ++AAY + + A ++F + PD+VSY+ LIS+++ A+ LF MR +
Sbjct: 141 NAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIE 200
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ ++ ++TA +L L Q+H LAI G+ V N+L+ Y + G LD A +
Sbjct: 201 PNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHL 260
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLE 245
F EM + +D SWN+M+ + + +AL+LF+ + + D +TL+++LTA
Sbjct: 261 FDEMPQ-RDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCH 319
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G + HA+ I+ G N + + +I Y +C G + +FE +P D++ W MI
Sbjct: 320 ARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRC-GSLNHVAALFERMPVRDIITWTEMI 378
Query: 306 SGYSQ------------------------------KEEYSDQALGCFKKLNRVGYHPDDC 335
+ Y + K +AL F ++ + G D
Sbjct: 379 TAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDF 438
Query: 336 SFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ VI+AC L + +QIH IK RSN + AL+ M SKCG ++DA R+F
Sbjct: 439 TLTGVINACGLLLKLEISRQIHGFIIKFGFRSNA-CIEAALIDMCSKCGRMDDADRMFQS 497
Query: 395 MPEH--NTVSLNSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKV 451
+ N++ SMI GYA++G+ EA+ LF E + + F S+L C G
Sbjct: 498 LSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFH 557
Query: 452 AEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G Q + +K GF E + +I + + + DA + MP
Sbjct: 558 EVGKQIHCQALKT--GFHAELGVGNSIISMYSKCYNIDDAIKAFNTMP 603
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 225/463 (48%), Gaps = 44/463 (9%)
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
L + LH + G D + + N+++ Y + G + +A VF M D VS+++++ ++
Sbjct: 122 LARALHASILKLGEDTH--LGNAVIAAYIKLGLVVDAYEVFMGMST-PDVVSYSALISSF 178
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ EA+QLF M + + Y+ +ILTA +L GLQ HA IK G+ Q
Sbjct: 179 SKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLV 238
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + LI LY KC G + + +F+E+PQ D+ WNTMIS + Y ++AL F+ LN
Sbjct: 239 FVANALIGLYGKC-GCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSY-EKALELFRVLN 296
Query: 327 R-VGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
+ G+ D + +++AC+ + G++IHA I+I + +N +SV+NA++ Y++CG+
Sbjct: 297 QNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENN-LSVSNAIIGFYTRCGS 355
Query: 385 LEDARRLFDR-------------------------------MPEHNTVSLNSMIAGYAQH 413
L LF+R MPE N+VS N+++ G+ ++
Sbjct: 356 LNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKN 415
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G++AL LF M++ T+ T V++AC K+ ++ + FGF
Sbjct: 416 NEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIK-FGFRSNACI 474
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ +ID+ + G++ DA+R+ +++ + G+ ++ + + N +P + Y
Sbjct: 475 EAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTS--MICGYARNGLPEEAICLFYRCQ 532
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
+ V GV GF EV KQ+H + G H
Sbjct: 533 SEGTMVLDEVAFTSILGVCGTLGFH--EVGKQIHCQALKTGFH 573
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/711 (35%), Positives = 367/711 (51%), Gaps = 50/711 (7%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAYLSN-HFILLYSKCGCLSAAH-HAFNQTQHANVFSFNV 70
R L G+++ L V + Y+ H + G A H H A++F
Sbjct: 59 RPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATS 118
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AY R AR LFDQ+P+ ++V++ LI+ Y AL +F +M E
Sbjct: 119 LVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPS 178
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+TL ++ A +SNN L Q+H I S+ NSL Y+++G L+ A R F
Sbjct: 179 HYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAF- 237
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
M K+ ++W +M+ A + E L LF +M+ + + +TL S+++ + DL
Sbjct: 238 RMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDL 297
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q A K G N + + + LY + G+ + M+ FEE+ ++ WN MISG
Sbjct: 298 NLGKQVQAFCFKIGCQTNIPVKNSTMYLYLR-KGETDEAMRFFEEMDDVSIITWNAMISG 356
Query: 308 YSQKEEYSD----------QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIH 356
Y+Q E + QAL F+ L R PD +F ++S CS++ + G+QIH
Sbjct: 357 YAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIH 416
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A TIK S+ + VN+ALV MY+KCG +EDA + F M V+ SMI+GY+QHG
Sbjct: 417 AQTIKTGFLSD-VVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRP 475
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EA++LFE M + P ITFV VLSAC++ G + + YF MMK+ + EP +HY C
Sbjct: 476 QEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGC 535
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
M+D+ R G+L DA I F P +A AA+ ++L P
Sbjct: 536 MVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKG 595
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+L N+Y ++ +W +VA +R+LM+ G+ SWI +K +++ F A D +H +
Sbjct: 596 IETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELS 655
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKEKRLV--------------HHSEKLAVAFGLLSTSYG 625
E++ LE + K K GY P + L HHSE+LAVA GLL T G
Sbjct: 656 DELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPG 715
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
+ V KN+ +C DCH++IKF S +A REI VRD+ R H FKDGRCSCGD+
Sbjct: 716 ATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G+ +HA +K +++ + +Y+KCGC+ A AF +
Sbjct: 395 TFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEM 454
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ ++ +++ Y++ R A QLF+ + +P+ +++ ++SA + G E A
Sbjct: 455 SIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAE 514
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+E+ + + ++ DHY ++ + R
Sbjct: 515 HYFDMMKEE------YKIEPIV----------------------DHYG----CMVDMFVR 542
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTL 234
G LD+A G +E W+S+V H A ++ L+ G++ Y L
Sbjct: 543 LGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVL 601
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/646 (37%), Positives = 361/646 (55%), Gaps = 44/646 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ IA A +F+ + + D VS+N+LIS +E A F MR
Sbjct: 426 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM 485
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FTL ++ AS + L +Q+HC + G D SV+N+LL Y+ G E +V
Sbjct: 486 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 545
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M E D+VSWNS++ A + +A++ F +M+ GL T +IL+A +SL
Sbjct: 546 FSLMPEY-DQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLS 604
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
Q HA ++K ++ IG+ L+ Y KC G+M +C K+F + + D V WN+M
Sbjct: 605 LHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC-GEMNECEKIFARMSETRDEVSWNSM 663
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY E +A+ + + G D +F ++SAC++++ G ++HA I+
Sbjct: 664 ISGYIHNE-LLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC 722
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG ++ A R F+ MP N S NSMI+GYA+HG G +AL+LF
Sbjct: 723 LESD-VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF 781
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M+ PP ++TFV VLSAC+H G V EG ++F M +++ P EH+SCM+DLLGR
Sbjct: 782 TRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGR 841
Query: 484 AGKLTDAERLIEAMPFNPG-------------------SIALKAANHFLQLEPSNAVPYV 524
AGKL + I +MP P + +AA L+LEP NAV YV
Sbjct: 842 AGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYV 901
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+LAN+YA+ KWE+VA R M++ V+K+ G SW+ +K +HVFVA D HP I++
Sbjct: 902 LLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYD 961
Query: 585 YLEEMSRKMKQAGYVPDKEKRLV------------HHSEKLAVAFGLLSTSYGEPILVMK 632
L E++RKM+ AGY+P + L +HSEK+AVAF +L+ PI +MK
Sbjct: 962 KLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMK 1020
Query: 633 NLRICGDCHNAIKFISAIA--GREITVRDTYRFHCFKDGRCSCGDY 676
NLR+CGDCH+A +IS I ++ ++ + + +C CGD+
Sbjct: 1021 NLRVCGDCHSAFGYISKIIFFFLKMAMKPSNNIW-IRRQQCPCGDW 1065
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 249/517 (48%), Gaps = 93/517 (17%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+ LH +K + +LSN I +Y + G L +A F++ + N+ ++ L++ Y +
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 78 QLRIASARQLFDQ------IPQ-----------------------------------PDL 96
+ A F IP D+
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 97 VSYNTLISAYADC--------------------------------GDTESALSLFKDMRE 124
V N LIS Y C GD SA LF M++
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 125 K----RFDTDGFTLSGLITASSNN----LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ F + +T LIT + ++ LC+++Q+ GF V+++L++ ++R
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G D+AK +F +MG +++ VS N ++V + ++G A ++F EM L +G++ +
Sbjct: 330 FGLTDDAKNIFEQMG-VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSYVV 387
Query: 237 ILTAFTSL----EDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFE 291
+L+AF+ E G + HAH+I++G + N IG+GL+++YAK SG + D VFE
Sbjct: 388 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK-SGAIADACSVFE 446
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PS 350
+ + D V WN++ISG Q E S+ A F ++ R G P + + + +S+C++L
Sbjct: 447 LMVEKDSVSWNSLISGLDQN-ECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIM 505
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LG+QIH +K+ + ++ +SV+NAL+A+Y++ G + ++F MPE++ VS NS+I
Sbjct: 506 LGEQIHCDGLKLGLDTD-VSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGAL 564
Query: 411 AQHGIGM-EALRLFEWMLETNIPPTNITFVSVLSACA 446
+ + +A++ F M+ + +TF+++LSA +
Sbjct: 565 SDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVS 601
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 227/456 (49%), Gaps = 29/456 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+F N L+ Y R + SA++LFD++ +LV++ LIS Y G + A + F+DM
Sbjct: 104 GNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM 163
Query: 123 REKRFDTDGFTLSGLITA---SSNNLC-LIKQLHCLAIYCGFDHYASVNNSLLTCY-SRN 177
F + + + A S + C L Q+H L + V N L++ Y S
Sbjct: 164 VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCL 223
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM----YT 233
++A+ VF +G I++ +SWNS++ Y + + + A LF M LG YT
Sbjct: 224 DSANDARSVFDGIG-IRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYT 282
Query: 234 LASILTAFTSLEDLVGGL----QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
S++T S D GL Q A + KSGF Q+ ++ S L+ +A+ G D +
Sbjct: 283 FGSLITTACSSVDF--GLCVLEQMLARVEKSGFLQDLYVSSALVSGFARF-GLTDDAKNI 339
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLS 348
FE++ ++V N ++ G K++ + A F ++ + VG + D S+V ++SA S S
Sbjct: 340 FEQMGVRNVVSMNGLMVGLV-KQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFS 396
Query: 349 -----PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
G+++HA I+ + N++++ N LV MY+K G + DA +F+ M E ++VS
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 456
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMK 462
NS+I+G Q+ +A F M T P+N T +S LS+CA G + G++ + +K
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 516
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G + + + ++ L G T+ ++ MP
Sbjct: 517 --LGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLR 80
+HAL LK + + N + Y KCG ++ F R
Sbjct: 612 IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF---------------------AR 650
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
++ R D VS+N++IS Y A+ L M +K D FT + +++A
Sbjct: 651 MSETR---------DEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSA 701
Query: 141 SSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
++ L + ++H I + V ++L+ YS+ G +D A R F+E+ +++ S
Sbjct: 702 CASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASR-FFELMPLRNVYS 760
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WNSM+ Y +H G +AL+LF M+ D T +L+A + + + G + H +
Sbjct: 761 WNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSM 819
Query: 259 KSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ + + S ++DL + +G + + +P +P++++W T++
Sbjct: 820 SEVYRLSPRVEHFSCMVDLLGR-AGKLDEVGDFINSMPMKPNVLIWRTVL 868
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G +HA ++ + + + + +YSKCG + A F
Sbjct: 694 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 753
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
NV+S+N +++ YAR A +LF ++ PD V++ ++SA + G E
Sbjct: 754 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF 813
Query: 117 SLFKDMRE 124
FK M E
Sbjct: 814 EHFKSMSE 821
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 318/521 (61%), Gaps = 35/521 (6%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
D++ + N ++ Y++ G LD+A+R+F EM KD V+W +++ + Q+ +AL LF
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFDEM-PTKDMVTWTALIAGFSQNNRPRDALLLF 177
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M+ L L + +TL+S+L A S L G Q HA +K G+ + ++GS L+D+YA+C
Sbjct: 178 PQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC 237
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G M F+ +P V WN +ISG+++K E + AL K+ R + P ++
Sbjct: 238 -GHMDAAQLAFDGMPTKSEVSWNALISGHARKGE-GEHALHLLWKMQRKNFQPTHFTYSS 295
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
V SAC+++ GK +HA IK ++ + N L+ MY+K G+++DA+R+FDR+ +
Sbjct: 296 VFSACASIGALEQGKWVHAHMIKSGLKLIAF-IGNTLLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+M+ G AQHG+G E L FE ML I P I+F+ VL+AC+H+G + EG YF
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF 414
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------------- 503
+MK + EP+ HY +DLLGR G L AER I MP P +
Sbjct: 415 ELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473
Query: 504 --IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
+ + AA +L+P ++ P ++L+NIYA++G+W +VA +R++M++ GV+K+P SW+E
Sbjct: 474 MELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHH 609
++ +H+FVA D +HP IKEI EE+S K+K+ GYVPD +E++L +H
Sbjct: 534 IENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYH 593
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
SEKLA+AF LL+T G PI + KN+R+CGDCH AIKF+S I
Sbjct: 594 SEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 160/290 (55%), Gaps = 13/290 (4%)
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
GL AL L Q SL ++Y+ +L T L + G HAHL+ S F N +
Sbjct: 71 GLYALDLIQRG-SLVPDYNLYS--KLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127
Query: 272 LI-DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
+I ++YAKC G + D ++F+E+P D+V W +I+G+SQ D AL F ++ R+G
Sbjct: 128 IIVNMYAKC-GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRD-ALLLFPQMLRLGL 185
Query: 331 HPDDCSFVCVISACSN---LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
P+ + ++ A + L P G Q+HA +K +S+ + V +ALV MY++CG+++
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDP--GTQLHAFCLKYGYQSS-VYVGSALVDMYARCGHMDA 242
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A+ FD MP + VS N++I+G+A+ G G AL L M N PT+ T+ SV SACA
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + +G+ + M G + + ++D+ +AG + DA+R+ + +
Sbjct: 303 IGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL 351
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 36/308 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +LK L G LHA LK S Y+ + + +Y++CG + AA AF+
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+N L++ +AR+ G+ E AL L
Sbjct: 251 PTKSEVSWNALISGHARK-------------------------------GEGEHALHLLW 279
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ K F FT S + + AS L K +H I G A + N+LL Y++ G
Sbjct: 280 KMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+AKRVF + + D VSWN+M+ QH G E L F++M+ + + + + +L
Sbjct: 340 SIDDAKRVFDRLVK-PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVL 398
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
TA + L GL + + K + +DL + G + + E+P +P
Sbjct: 399 TACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRV-GLLDRAERFIREMPIEPT 457
Query: 298 LVLWNTMI 305
+W ++
Sbjct: 458 AAVWGALL 465
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Query: 311 KEEYSDQALGCF--KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
++ SD G + + R PD + ++ C+ L G+ +HA + N
Sbjct: 62 RKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDN 121
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + N +V MY+KCG L+DARR+FD MP + V+ ++IAG++Q+ +AL LF ML
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P + T S+L A + G + + +G++ S ++D+ R G +
Sbjct: 182 RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHM 240
Query: 488 TDAERLIEAMP 498
A+ + MP
Sbjct: 241 DAAQLAFDGMP 251
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 37/214 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V C L GK +HA +K+ + A++ N + +Y+K G + A F++
Sbjct: 292 TYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL 351
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +L A+ F+Q+ +P+ +S+ +++A + G + L
Sbjct: 352 VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL 411
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M++ + + D HY + + L R
Sbjct: 412 YYFELMKKYKVEPD-----------------------------VPHYVTFVDLL----GR 438
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G LD A+R EM W +++ A H+
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHK 472
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/560 (40%), Positives = 330/560 (58%), Gaps = 36/560 (6%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLHC+ + GFD V ++L YS+ G L EA RVF +M + KD V+W +M+ Y ++
Sbjct: 62 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQ-KDAVAWTAMIDGYAKN 120
Query: 210 REGLEALQLFQEMVSLQL-GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
A+ F++M L G D + S+L+A L+D H + K+GF +
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ LID+YAK S D+ +V + P ++V +MI GY + + ++AL + +L R
Sbjct: 181 RNALIDMYAK-SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETD-CVEEALVIYVELRR 238
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P++ +F +I C+ + G Q+HA IK ++ + V + LV MY KCG +
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF-VGSTLVDMYGKCGLIS 297
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+ +LF+ + ++ N++I +AQHG G EA++ F+ M+ + I P +I FVS+L+AC+
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 357
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP----- 501
H G V EG KYF MK+ G EP+ EHYSC+ID GRAG+L +A + I MP P
Sbjct: 358 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 417
Query: 502 ----------GSIALK--AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
GS L AA + ++LEP N +V L+ IYA+ G+WE+V +R+LMRD
Sbjct: 418 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 477
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
++K PGFSW++ K+ HVF +ED SHP K+I+ LEE++ ++K+ GY+PD
Sbjct: 478 RIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNL 537
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KE+ L +HSE++AVAF L+S +PI+V KNLRIC DCH A KFI + R+I V
Sbjct: 538 EDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIV 597
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F +GRCSCGDYW
Sbjct: 598 RDNSRFHHFVNGRCSCGDYW 617
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 40/254 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C + L G LHA +K + +++ + + +Y KCG +S + FN+
Sbjct: 247 TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ ++N ++ +A+ A Q FD++ +P+ +++ +L++A + G + L
Sbjct: 307 EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 366
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+E I +HY+ + ++ Y R
Sbjct: 367 KYFYSMKEAH----------------------------GIEPKEEHYSCIIDT----YGR 394
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLDMYT 233
G LDEA + EM + W S++ A G G A Q ++ G+ + +
Sbjct: 395 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHV-S 453
Query: 234 LASILTAFTSLEDL 247
L+ I + ED+
Sbjct: 454 LSGIYASLGQWEDV 467
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 247/704 (35%), Positives = 383/704 (54%), Gaps = 61/704 (8%)
Query: 24 LYLKNLVPFSAYLSNHFILLYSKCG---CLSAAHHAFNQTQH----ANVFSFNVLLAAYA 76
++L+ L+P A F+ + S CG L A + + +V L+ Y
Sbjct: 228 MWLEGLLPNRA----SFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYG 283
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT--- 133
R + + +F+ + + VS+N +I+A+A CG +A +++ M+++ F + T
Sbjct: 284 RCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVT 343
Query: 134 -LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
L ++SS +L LH G + V +L+T Y G +D A+ F +
Sbjct: 344 ALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI-P 402
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
K+ VSWN+M+ AYG + EA++LF M L + S L ED+
Sbjct: 403 AKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK---VSYLAVLGCCEDVSEARS 459
Query: 253 FHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HA ++ +G F Q S I +G++ ++A+ SG + + + F+ D V WNT ++ S +
Sbjct: 460 IHAEVVGNGLFAQESSIANGVVRMFAR-SGSLEEAVAAFDATVVKDSVSWNTKVAALSAR 518
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA-LTIKIEIRSNRI 369
E+ A+ F + G+ PD + V V+ C++L LG+ I L+ IE+ + +
Sbjct: 519 EDLHG-AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERD-V 576
Query: 370 SVNNALVAMYSKCGN-LEDARRLFDRMPE--HNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
V +A++ M +KCG+ +++ RLF RMP+ + V+ N+MIA YAQHG G +AL+LF M
Sbjct: 577 VVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIM 636
Query: 427 LE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG-EHYSCMIDLLGRA 484
+ +++ P + TFVSVLS C+H G V +G F + +++ G E + EHY+C++D+LGR
Sbjct: 637 QQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRM 696
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G L +AE I MP S+ +AA F++L S++V YV+L+
Sbjct: 697 GYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLS 756
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKK-PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
NIYAA+G+WE+ +R M +R V+K+ PG S I VK ++H F A D SHP I+ L
Sbjct: 757 NIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAEL 816
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
E + +++AGYVPD KE+ L +HSEKLA+AFGL+S + I V+KNL
Sbjct: 817 ERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNL 876
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCF-KDGRCSCGDYW 677
R+C DCH A KFI+ + REI VRD RFH F KDG CSCGDYW
Sbjct: 877 RVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 152/663 (22%), Positives = 266/663 (40%), Gaps = 108/663 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C+G DL G+ LH +K + + L N+ + +YSKC L A+ AF+
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 61 QHANVFSFNVLLAAYA-------------------------------------------- 76
+ + ++N L+AA +
Sbjct: 86 RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSS 145
Query: 77 -RQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMR-------- 123
R IA AR + D I + DL L+ AY CG ESAL +F ++
Sbjct: 146 SRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 205
Query: 124 ---------EKRFD-----TDGFTLSGLITASS------------NNLCLIKQLHCLAIY 157
++R D L GL+ + ++L L + +H
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 265
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
GF V +L+T Y R G +DE+ VF M +++ VSWN+M+ A+ Q A
Sbjct: 266 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA-VRNHVSWNAMIAAFAQCGHRSAAFA 324
Query: 218 LFQEMVSLQLGLDMYTLASILTAF--TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
++ M + T + L A +S +DL H + +G + +G+ L+ +
Sbjct: 325 IYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTM 384
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y +G + F+ IP ++V WN M++ Y + +A+ F + R P+
Sbjct: 385 YGS-TGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGR-AREAMELFAAMKRQSLAPNKV 442
Query: 336 SFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
S++ V+ C ++S + + IHA + + + S+ N +V M+++ G+LE+A FD
Sbjct: 443 SYLAVLGCCEDVSEA--RSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDAT 500
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
++VS N+ +A + A+ F M P T VSV+ CA G + G+
Sbjct: 501 VVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGR 560
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD-AERLIEAMPFNPGSIALKAANHFLQ 514
+ E + S +++++ + G D ERL MP + +
Sbjct: 561 SIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDL---------- 610
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ-MHVFVAED 573
V + + YA G + + R+M+ R + +++ V H + ED
Sbjct: 611 ------VAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVED 664
Query: 574 GSH 576
G H
Sbjct: 665 GIH 667
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 16/281 (5%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ + TLA +L DL G Q H ++K G +N +G+ L+ +Y+KC + D
Sbjct: 22 IPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRS-LDDANA 80
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNL 347
F + + WNT+I+ S D L KL R P+ + + V+ A ++
Sbjct: 81 AFSALRSRGIATWNTLIAAQSSPAAVFD--LYTRMKLEERAENRPNKLTIIAVLGAIASG 138
Query: 348 SPSLGKQIHALTIKI------EIRSNRIS----VNNALVAMYSKCGNLEDARRLFDRMPE 397
PS A +I +IR + + V AL+ Y KCG +E A +F R+
Sbjct: 139 DPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV 198
Query: 398 HNTVSLNSMIAGYAQHGIGME-ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + N+ I A + + AL L M + P +FV++LS+C + +
Sbjct: 199 PDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS 258
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++++ GF + + ++ + GR G + ++ + EAM
Sbjct: 259 IHARVEEL-GFLGDVVVATALVTMYGRCGSVDESIAVFEAM 298
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/710 (33%), Positives = 375/710 (52%), Gaps = 66/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ +H + Y+S + +Y+KCG L A FN
Sbjct: 109 TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H + D+V++N +I+A++ +
Sbjct: 169 SHQD-----------------------------RDIVAWNAMIAAFSFHALHAQTIHSVA 199
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M++ + TL ++ +N L K +H I F + +LL Y++
Sbjct: 200 QMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCH 259
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASI 237
L A+++F + + K++V W++M+ Y H +AL L+ +M+ + L TLA++
Sbjct: 260 LLFYARKIFNTVNK-KNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATM 318
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A L DL G + H H+IKSG ++ +G+ LI +YAKC G M + + +E+ D
Sbjct: 319 LRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKC-GIMDNAVGFLDEMIAKD 377
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
V ++ +ISG Q Y+++AL F+++ G P + + ++ ACS+L+ G H
Sbjct: 378 TVSYSAIISGCVQ-NGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
T+ + +N S+ NA++ MYSKCG + +R +FDRM + +S N+MI GY HG+
Sbjct: 437 GYTV-VRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLC 495
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+EAL LF+ + + P ++T ++VLSAC+H+G V EG+ +FS M F +P HY C
Sbjct: 496 VEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYIC 555
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP-----GSIALKAANH------------FLQLEPSN 519
M+DLL RAG L +A I+ MPF P G++ H L P
Sbjct: 556 MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEG 615
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+V+++NIY++ G+W++ A IR + R G +K PG SW+E+ +HVF+ SHP
Sbjct: 616 TGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQS 675
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
I+ L+E+ +MK+ GY D KE+ L++HSEK+A+AFG+L+TS
Sbjct: 676 ASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSR 735
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ILV KNLRIC DCH+AIKFI+ + REITVRD RFH FKDG C+C D+W
Sbjct: 736 ILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 217/424 (51%), Gaps = 13/424 (3%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I AR +FDQIP+P +V +N +I YA G + ++ L+ M + FT L+ A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 141 SSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEV 197
S+ L L + +H A G V+ +LL Y++ G L +A+ +F + + +D V
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
+WN+M+ A+ H + + +M + + TL SIL L G HA+
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
I++ F N + + L+D+YAKC + K+F + + + V W+ MI GY + SD
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHL-LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISD- 294
Query: 318 ALGCFKKLNRV-GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
AL + + + G +P + ++ AC+ L+ GK++H IK + + +V N+L
Sbjct: 295 ALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLD-TTVGNSL 353
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
++MY+KCG +++A D M +TVS +++I+G Q+G +AL +F M + I P
Sbjct: 354 ISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYL 413
Query: 436 ITFVSVLSACAHTGKVAEGQ--KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
T +++L AC+H + G +++++ GF + + +ID+ + GK+T + +
Sbjct: 414 ETMIALLPACSHLAALQHGTCCHGYTVVR---GFTNDTSICNAIIDMYSKCGKITISREI 470
Query: 494 IEAM 497
+ M
Sbjct: 471 FDRM 474
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 27/379 (7%)
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
SRN + A+ VF ++ + V WN M+ Y +++ L+ M+ L + +T
Sbjct: 53 SRNE-IQLARHVFDQIPK-PSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTF 110
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L A +SL+ L G H H G + ++ + L+ +YAKC G + +F I
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKC-GHLYQAQTLFNSIS 169
Query: 295 QP--DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D+V WN MI+ +S ++ Q + ++ + G P+ + V ++ +
Sbjct: 170 HQDRDIVAWNAMIAAFSFHALHA-QTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ 228
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GK IHA I+ N + + AL+ MY+KC L AR++F+ + + N V ++MI GY
Sbjct: 229 GKAIHAYYIRNFFFDN-VVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYV 287
Query: 412 QHGIGMEALRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEP 469
H +AL L++ ML + PT T ++L ACA + G+K + M+K G +
Sbjct: 288 LHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS--GMDL 345
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM---------PFNPGSI----ALKAANHFLQLE 516
+ + +I + + G + +A ++ M G + A KA F Q++
Sbjct: 346 DTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQ 405
Query: 517 PSNAVPYV--MLANIYAAS 533
S PY+ M+A + A S
Sbjct: 406 SSGIAPYLETMIALLPACS 424
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/632 (37%), Positives = 362/632 (57%), Gaps = 44/632 (6%)
Query: 87 LFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF++ + + D+ S+N++I+ A GD+ AL F MR+ + I A S+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 CLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+ KQ H A G+ V+++L+ YS G L++A++VF E+ + ++ VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMI 149
Query: 204 VAYGQHREGLEALQLFQEMVSLQ------LGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
Y + L+A+ LF++++ + + LD L S+++A + + H+ +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 258 IKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
IK GF + +G+ L+D YAK G + K+F++I D V +N+++S Y+Q S+
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSN 268
Query: 317 QALGCFKKL--NRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNA 374
+A F++L N+V +++ + + +GK IH I++ + + I V +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTS 327
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
++ MY KCG +E AR+ FDRM N S +MIAGY HG +AL LF M+++ + P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITFVSVL+AC+H G EG ++F+ MK FG EP EHY CM+DLLGRAG L A LI
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 495 EAMPFNPGSI---ALKAA--------------NHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ M P SI +L AA +L+ SN Y++L++IYA +G+W+
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V +R +M++RG+ K PGFS +E+ ++HVF+ D HP ++I+ +L E++RK+ +AG
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 598 YVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV +KE L HSEKLA+AFG+++T G + V+KNLR+C DCHN IK
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS I RE VRD RFH FKDG CSCGDYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 214/437 (48%), Gaps = 29/437 (6%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
AF +++F + L+ Y+ ++ AR++FD+IP+ ++VS+ ++I Y G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 114 SALSLFKDMR-EKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYAS 165
A+SLFKD+ ++ D D L + S + C L + +H I GFD S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 166 VNNSLLTCYSRN--GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V N+LL Y++ G + A+++F ++ + KD VS+NS++ Y Q EA ++F+ +V
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 224 SLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ + + TL+++L A + L G H +I+ G + +G+ +ID+Y KC G
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC-GR 337
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ K F+ + ++ W MI+GY ++ +AL F + G P+ +FV V++
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGM-HGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 343 ACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHN 399
ACS+ L + +A+ + + + +V + + G L+ A L RM + +
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPG-LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 400 TVSLNSMIAGYAQHG----IGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEG 454
++ +S++A H + RLFE + +N + +LS A G+ +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFE------LDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 455 QKYFSMMKDMFGFEPEG 471
++ +MK+ +P G
Sbjct: 510 ERVRMIMKNRGLVKPPG 526
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L GK +H ++ + + I +Y KCG + A AF++ ++ NV S+ ++A
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 75 YARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
Y A A +LF D +P+ +++ ++++A + G F M+ +
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----- 417
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+ G +HY + + L R GFL +A + M
Sbjct: 418 -----------------------FGVEPGLEHYGCMVDLL----GRAGFLQKAYDLIQRM 450
Query: 191 GEIKDEVSWNSMVVAYGQHR 210
D + W+S++ A H+
Sbjct: 451 KMKPDSIIWSSLLAACRIHK 470
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/638 (36%), Positives = 351/638 (55%), Gaps = 48/638 (7%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--S 141
AR+LFD +P+ ++V++ L++ Y L +F +M E +TL + A +
Sbjct: 92 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
S ++ L KQ+H AI G + S+ NSL + Y++ G LD A R F+ + E K+ ++W +
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVITWTT 210
Query: 202 MVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
M+ A + E +E + LF +M+ + + +TL S+++ + DL G Q A K
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD---- 316
G N + + + LY + G+ + M++FE++ ++ WN MISGY+Q + +
Sbjct: 271 GCETNLPVKNSTMYLYLR-KGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329
Query: 317 ------QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRI 369
QAL F+ L R PD +F ++S CS + + G+QIHA TIK S+ +
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD-V 388
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
VN+ALV MY+KCG ++DA + F MP V+ SMI+GY+QHG EA++LFE M
Sbjct: 389 VVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 448
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P ITFVS+LSAC++ G V E + YF MMK + EP +HY CMID+ R G++ D
Sbjct: 449 GVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED 508
Query: 490 AERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAA 532
A I+ F P +A AA+ L+L+P Y++L N+Y +
Sbjct: 509 AFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYIS 568
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+ +W++VA +R+LM+ V SWI +K +++ F A D +HP E++ LE + K
Sbjct: 569 TERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEK 628
Query: 593 MKQAGYVP----------DKEK----RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
K GY P D EK L HHSE+LAVA GLL T G + V KN+ +C
Sbjct: 629 AKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCR 688
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
DCH++IK S + REI VRD+ R H FKDGRCSCGD+
Sbjct: 689 DCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 222/479 (46%), Gaps = 53/479 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C+ D+ GK +H +K + N LY+K G L +A AF +
Sbjct: 141 TLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR- 199
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-TESALSLF 119
IP+ +++++ T+ISA A+ + E +SLF
Sbjct: 200 ------------------------------IPEKNVITWTTMISACAEDEECVELGMSLF 229
Query: 120 KDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
DM + FTL+ +++ + +L L KQ+ + G + V NS + Y R
Sbjct: 230 IDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRK 289
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-----------HREGLEALQLFQEMVSLQ 226
G DEA R+F +M E ++WN+M+ Y Q G +AL +F+++
Sbjct: 290 GETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSV 348
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ D++T +SIL+ +++ L G Q HA IKSGF + + S L+++Y KC G ++D
Sbjct: 349 MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC-GCIQDA 407
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
K F E+P V W +MISGYSQ + +A+ F+++ G P++ +FV ++SACS
Sbjct: 408 NKAFLEMPTRTFVTWTSMISGYSQHGQ-PQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 466
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLN 404
+ + +K E + + ++ M+ + G +EDA R E N +
Sbjct: 467 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWS 526
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMMK 462
S++AG HG A + +LE + P I T++ +L+ T + + + +MK
Sbjct: 527 SLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILLLNMYISTERWQDVARVRKLMK 583
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG--CFKKLNRVGYHPDDCSFVCVI 341
RD ++F+ +P+ ++V W +++GY+ S ALG F ++ +G +P + +
Sbjct: 90 RDARRLFDGMPERNVVTWTALVTGYTLN---SQPALGLEVFVEMLEMGRYPSHYTLGATL 146
Query: 342 SAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
+AC ++ LGKQ+H IK S S+ N+L ++Y+K G+L+ A R F R+PE N
Sbjct: 147 NACLASCDVDLGKQVHGYAIKYGAES-ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV 205
Query: 401 VSLNSMIAGYAQHGIGME-ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY-- 457
++ +MI+ A+ +E + LF ML + P T SV+S C + G++
Sbjct: 206 ITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQA 265
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FS G E + + L R G+ +A RL E M
Sbjct: 266 FSF---KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQM 302
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
DARRLFD MPE N V+ +++ GY + L +F MLE P++ T + L+AC
Sbjct: 91 DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ V G++ +G E + + L + G L A R +P
Sbjct: 151 ASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 201
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/706 (33%), Positives = 373/706 (52%), Gaps = 68/706 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL++C G DLV G+ +HA ++ + N I +Y KCG
Sbjct: 137 TFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCG------------ 184
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR LFD++P D +S+N +IS Y + + L LF
Sbjct: 185 -------------------DVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFF 225
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE D D T++ +I+A + L QLH + +D SV NSL+ Y G
Sbjct: 226 RMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVG 285
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA+ VF M E +D VSW +++ + +AL+ ++ M D T+AS+L
Sbjct: 286 HWKEAESVFSGM-ECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVL 344
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A SL L G++ H ++G + + LID+Y+KC + +++F +IP D+
Sbjct: 345 SACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCK-RIEKALEIFHQIPDKDV 403
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+ W ++I+G + +AL F+K+ + P+ + + +SAC+ + + GK+IHA
Sbjct: 404 ISWTSVINGL-RINNRCFEALIFFRKM-ILKSKPNSVTLISALSACARVGALMCGKEIHA 461
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + + + NA++ +Y +CG + A F+ + E + + N ++ GYAQ G G
Sbjct: 462 HALKAGMGFDGF-LPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGA 519
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ LF+ M+E+ I P ++TF+S+L AC+ +G V EG +YF MK + P +HY+C+
Sbjct: 520 MVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACV 579
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLLGRAGKL +A IE MP P + AA H + + +
Sbjct: 580 VDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESI 639
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA SGKW+EVA +RR M++ G+ PG SW+EVK ++H F++ D HP ++
Sbjct: 640 GYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQ 699
Query: 581 EIHNYLEEMSRKMKQAGY-----------VPDKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ LE KMK +G+ K HSE+ A+A+ L++++ G PI
Sbjct: 700 EINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFCGHSERQAIAYSLINSAPGMPIW 759
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KNL +C CH+ +KFIS I REI+VRDT +FH FKDG CSCGD
Sbjct: 760 VTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 156/292 (53%), Gaps = 5/292 (1%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ N+LL+ + R G + A VF MGE +D SWN +V Y + EAL L+ ++
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGE-RDLFSWNVLVGGYTKAGFFDEALCLYHRILWA 129
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ D+YT S+L + DLV G + HAH+++ F + + + LI +Y KC GD+
Sbjct: 130 GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKC-GDVVS 188
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+F+++P D + WN MISGY + +E + L F ++ + PD + VISAC
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDE-CLEGLELFFRMRELSIDPDLMTMTSVISACE 247
Query: 346 NLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L LG Q+H+ ++ N ISV N+L+ MY G+ ++A +F M + VS
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGN-ISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWT 306
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
++I+G + + +AL ++ M T P +T SVLSACA G++ G K
Sbjct: 307 TIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMK 358
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
+QAL + V ++ FV +I C N S G+ + + + + + NA
Sbjct: 15 EQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNA 74
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++M+ + G++ +A +F RM E + S N ++ GY + G EAL L+ +L I P
Sbjct: 75 LLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPD 134
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
TF SVL +CA + G++ + + F F+ + + + +I + + G + A L
Sbjct: 135 VYTFPSVLRSCAGAMDLVRGREVHAHVVR-FDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 495 EAMP 498
+ MP
Sbjct: 194 DKMP 197
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/661 (35%), Positives = 351/661 (53%), Gaps = 67/661 (10%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
++ ARQ+FD IPQP L +NT+I Y+ ++ +S++ M D FT L+
Sbjct: 56 KMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLK 115
Query: 140 ASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
+ N+ L K L A+ GFD V + + +S +D A++VF +MG+ + V
Sbjct: 116 GFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVF-DMGDAWEVV 174
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
+WN M+ Y + ++ ++ LF EM + + TL +L+A + L+DL GG + ++
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDM------------RDCM------------------ 287
+N + + LID++A C G+M RD +
Sbjct: 235 NGGIVERNLILENVLIDMFAAC-GEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLA 293
Query: 288 -KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
K F++IP+ D V W MI GY + + +AL F+++ PD+ + V +++AC++
Sbjct: 294 RKYFDQIPERDYVSWTAMIDGYLRMNRFI-EALALFREMQMSNVKPDEFTMVSILTACAH 352
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L LG+ + K I+ N V NAL+ MY KCGN+ A+++F M + + +
Sbjct: 353 LGALELGEWVKTYIDKNSIK-NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTA 411
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI G A +G G EAL +F M+E +I P IT++ VL AC H G V +GQ +F M
Sbjct: 412 MIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQH 471
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKA 508
G +P HY CM+DLLGRAG+L +A +I MP P SI A A
Sbjct: 472 GIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMA 531
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A L+LEP N YV+L NIYAA +WE + +R+LM +RG++K PG S +E+ ++
Sbjct: 532 AKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYE 591
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVA 616
FVA D SHP KEI+ LE M + + +AGY P DKE L HSEKLA+A
Sbjct: 592 FVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIA 651
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
+ L+S+ G I ++KNLR+C DCH+ K +S RE+ VRD RFH F+ G CSC ++
Sbjct: 652 YALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNF 711
Query: 677 W 677
W
Sbjct: 712 W 712
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 200/427 (46%), Gaps = 40/427 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK L GK L +K+ + ++ FI ++S C + A F+
Sbjct: 109 TFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMG 168
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
V ++N++L+ Y R + ++ LF ++ + P+ V+ ++SA + D E
Sbjct: 169 DAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGK 228
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG--------FDHYASVN- 167
++K + G++ NL L L + CG FD+ + +
Sbjct: 229 HIYK-----------YINGGIV---ERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDV 274
Query: 168 ---NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
S++T ++ G +D A++ F ++ E +D VSW +M+ Y + +EAL LF+EM
Sbjct: 275 ISWTSIVTGFANIGQIDLARKYFDQIPE-RDYVSWTAMIDGYLRMNRFIEALALFREMQM 333
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ D +T+ SILTA L L G ++ K+ ++ +G+ LID+Y KC G++
Sbjct: 334 SNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKC-GNVG 392
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF+E+ D W MI G + + ++AL F + PD+ +++ V+ AC
Sbjct: 393 KAKKVFKEMHHKDKFTWTAMIVGLAI-NGHGEEALAMFSNMIEASITPDEITYIGVLCAC 451
Query: 345 SNLSPSLGKQ--IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
++ Q ++T++ I+ N ++ +V + + G LE+A + MP V
Sbjct: 452 THAGMVEKGQSFFISMTMQHGIKPN-VTHYGCMVDLLGRAGRLEEAHEVIVNMP----VK 506
Query: 403 LNSMIAG 409
NS++ G
Sbjct: 507 PNSIVWG 513
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 174/385 (45%), Gaps = 41/385 (10%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLT--CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+KQ+H I G ++ C +G + A++VF + + + WN+M+
Sbjct: 23 LKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFI-WNTMIKG 81
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + + ++ M++ + D +T +L FT L G H +K GF N
Sbjct: 82 YSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSN 141
Query: 266 SHIGSGLIDLYAKCSGDMRD-CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ I +++ C + D KVF+ ++V WN M+SGY++ +++ + F +
Sbjct: 142 LFVQKAFIHMFSLCR--LVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKM-LFIE 198
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ + G P+ + V ++SACS L GK I+ I I + + N L+ M++ CG
Sbjct: 199 MEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLILENVLIDMFAACG 257
Query: 384 NLED-------------------------------ARRLFDRMPEHNTVSLNSMIAGYAQ 412
+++ AR+ FD++PE + VS +MI GY +
Sbjct: 258 EMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLR 317
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+EAL LF M +N+ P T VS+L+ACAH G + G+ + D + +
Sbjct: 318 MNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE-WVKTYIDKNSIKNDTF 376
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + G + A+++ + M
Sbjct: 377 VGNALIDMYFKCGNVGKAKKVFKEM 401
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 155/313 (49%), Gaps = 10/313 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C +DL GK ++ +V + L N I +++ CG + A F+
Sbjct: 210 TLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNM 269
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ +V S+ ++ +A +I AR+ FDQIP+ D VS+ +I Y AL+LF+
Sbjct: 270 KNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFR 329
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSRN 177
+M+ D FT+ ++TA + +L ++ + Y + + V N+L+ Y +
Sbjct: 330 EMQMSNVKPDEFTMVSILTACA-HLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKC 388
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + +AK+VF EM KD+ +W +M+V + G EAL +F M+ + D T +
Sbjct: 389 GNVGKAKKVFKEMHH-KDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGV 447
Query: 238 LTAFTSLEDLVGGLQFHAHL-IKSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
L A T + G F + ++ G N +H G ++DL + +G + + +V +P
Sbjct: 448 LCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGC-MVDLLGR-AGRLEEAHEVIVNMPV 505
Query: 295 QPDLVLWNTMISG 307
+P+ ++W +++
Sbjct: 506 KPNSIVWGSLLGA 518
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 329/544 (60%), Gaps = 36/544 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
++ L+ Y++ L A+ VF EM E ++ VSW +M+ Y Q EAL LF +M+
Sbjct: 47 LSTRLIILYTKCECLGCARHVFDEMRE-RNVVSWTAMISGYSQRGFASEALHLFVQMLRS 105
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A++L++ T G Q H+H+ K + + +GS L+D+YAK +G + +
Sbjct: 106 DTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAK-AGRIHE 164
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VFE +P+ D+V +ISGY+Q ++AL F +L R G + ++ +++A S
Sbjct: 165 ARGVFECLPERDVVSCTAIISGYAQLG-LDEEALELFCRLQREGMSSNYVTYASLLTALS 223
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ GKQ+H+ ++ E+ + + N+L+ MYSKCGNL AR++F+ MP +S N
Sbjct: 224 GLAALDHGKQVHSHVLRCEL-PFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWN 282
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYF-SMMK 462
+M+ GY++HG G+E ++LF+ M E N + P ++TF++VLS C+H G +G + F MM
Sbjct: 283 AMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMN 342
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSIALKAANH------ 511
E EHY C+IDLLGRAG++ +A LI+ MPF P GS+ H
Sbjct: 343 GGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIG 402
Query: 512 ------FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
L++EP NA YV+L+N+YA++G+WE+V +R LM ++ V K+PG SWIE+ +
Sbjct: 403 EFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQT 462
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D SHP +E+ + E+ K K++GYVPD KEK L+ HSEKL
Sbjct: 463 IHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKL 522
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL+STS G P+ V+KNLRIC DCHN KF+S + GR++++RD RFH G CSC
Sbjct: 523 ALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSC 582
Query: 674 GDYW 677
GDYW
Sbjct: 583 GDYW 586
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 170/362 (46%), Gaps = 51/362 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C G G+ +H+ H F +
Sbjct: 113 TFATVLSSCTGFSGFELGRQIHS-------------------------------HIFKRN 141
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F + LL YA+ RI AR +F+ +P+ D+VS +IS YA G E AL LF
Sbjct: 142 YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFC 201
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + ++ T + L+TA S L KQ+H + C Y + NSL+ YS+ G
Sbjct: 202 RLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCG 261
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASI 237
L+ A+++F M ++ +SWN+M+V Y +H +G+E ++LF+ M ++ D T ++
Sbjct: 262 NLNYARKIFNNM-PVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAV 320
Query: 238 LTAFT--SLEDLVGGLQFHAHLIKSGFHQNS---HIGSGLIDLYAKCSGDMRDCMKVFEE 292
L+ + LED GL+ ++ G + H G +IDL + +G + + ++ ++
Sbjct: 321 LSGCSHGGLED--KGLEMFDEMMNGGDEIEAGIEHYGC-VIDLLGR-AGRVEEAFELIKK 376
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+P +P +W +++ +S+ +G F + P++ ++ SNL S
Sbjct: 377 MPFEPTAAIWGSLLGACRV---HSNTNIGEFVGCRLLEIEPENAGNYVIL---SNLYASA 430
Query: 352 GK 353
G+
Sbjct: 431 GR 432
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+++HA IK + ++ L+ +Y+KC L AR +FD M E N VS +MI+GY+
Sbjct: 29 GQRVHAHMIKT-CYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYS 87
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q G EAL LF ML ++ P TF +VLS+C G++ S + F+
Sbjct: 88 QRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHI-----FKRNY 142
Query: 472 EHY----SCMIDLLGRAGKLTDAERLIEAMP 498
E++ S ++D+ +AG++ +A + E +P
Sbjct: 143 ENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/693 (34%), Positives = 372/693 (53%), Gaps = 57/693 (8%)
Query: 37 SNHFILLYSKC---GCLSAAH----HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
S ++ L +C G L A H ++F L+ Y R AR LFD
Sbjct: 78 SAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFD 137
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLITA--SSNNLC 146
++P+ ++V++ LI+ Y AL +F +M + R+ +D +TL G+++A +S+N+
Sbjct: 138 EMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSD-YTLGGMLSACVASHNID 196
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
L KQ+H I G S+ NSL Y+++G L+ R F + + K+ ++W +M+ A
Sbjct: 197 LGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD-KNVITWTTMISAC 255
Query: 207 GQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
+ E L LF +M+ ++ + +TL S+++ + D+ G Q K G N
Sbjct: 256 AEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATN 315
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD--------- 316
+ + + LY + G+ + M++FEE+ ++ WN MISG++Q + +
Sbjct: 316 LPVKNSTMYLYLR-KGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRG 374
Query: 317 -QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNA 374
QAL F+ L R PD +F ++S CS + + G+QIHA TIK S+ + VN+A
Sbjct: 375 FQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSD-VVVNSA 433
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV MY+KCG +E A + F MP V+ SMI+GY+QHG +A++LFE M+ P
Sbjct: 434 LVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPN 493
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITFVS+LSAC++ G V E +YF MM++ + EP +HY CMID+ R G+L DA I
Sbjct: 494 EITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFI 553
Query: 495 EAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ F P +A AA+ L+L+P YV+L N+Y ++G+W
Sbjct: 554 KRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWR 613
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+VA +R+L + + SWI ++ +++ F A+D SHP E++ LE + K K G
Sbjct: 614 DVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIG 673
Query: 598 YVP-------DKEK-------RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
Y P D E+ L HHSE+LAVA GLL G + + KN+ +C DCH++
Sbjct: 674 YEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSS 733
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
IKF S +A REI VRD+ R H FKDGRCSCGD+
Sbjct: 734 IKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 215/473 (45%), Gaps = 65/473 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L CV ++ GK +H +K + N LY+K G L + AF
Sbjct: 181 TLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFK-- 238
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA-DCGDTESALSLF 119
+IP +++++ T+ISA A D TE L+LF
Sbjct: 239 -----------------------------RIPDKNVITWTTMISACAEDENYTELGLNLF 269
Query: 120 KDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLH--CLAIYCGFDHYASVNNSLLTCYS 175
DM + + FTL+ +++ +S ++ L KQ+ C I C + V NS + Y
Sbjct: 270 LDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATN--LPVKNSTMYLYL 327
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-----------HREGLEALQLFQEMVS 224
R G +EA R+F EM E ++WN+M+ + Q G +AL++F+++V
Sbjct: 328 RKGETEEAMRLFEEM-EDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVR 386
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ D++T +SIL+ +++ L G Q HA IK+GF + + S L+++Y KC G +
Sbjct: 387 SAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKC-GCIE 445
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
K F E+P LV W +MISGYSQ D A+ F+ + G P++ +FV ++SAC
Sbjct: 446 YATKAFVEMPTRTLVTWTSMISGYSQHGRPHD-AIQLFEDMILAGAKPNEITFVSLLSAC 504
Query: 345 SNLSPSLGKQIHALTIKIEIRSNRISVN------NALVAMYSKCGNLEDARRLFDRMP-E 397
S + ++ N + ++ M+ + G L+DA R E
Sbjct: 505 -----SYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFE 559
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
N +S++AG HG A + +LE P T+V +L+ TG+
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADRLLELK-PKVVETYVLLLNMYISTGR 611
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 14/248 (5%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA+ + +E S+Q MY +L L G H H++K+G + + + L+
Sbjct: 65 EAMAMLKEGQSVQSA--MYV--PLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLV 120
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
++Y +C G+ +D +F+E+P+ ++V W +I+GY+ + AL F ++ ++G +P
Sbjct: 121 NVYMRC-GNSQDARNLFDEMPEKNVVTWTALITGYTLNSQ-PVLALEVFVEMLKLGRYPS 178
Query: 334 DCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + ++SAC ++ + LGKQ+H TIK S S+ N+L +Y+K GNLE R F
Sbjct: 179 DYTLGGMLSACVASHNIDLGKQVHGYTIKYGAAS-ITSIGNSLCRLYTKSGNLESGIRAF 237
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGME-ALRLFEWMLETNIPPTNITFVSVLSACAHT--- 448
R+P+ N ++ +MI+ A+ E L LF ML+ + P T SV+S C +
Sbjct: 238 KRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDM 297
Query: 449 --GKVAEG 454
GK +G
Sbjct: 298 NLGKQVQG 305
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/661 (35%), Positives = 362/661 (54%), Gaps = 38/661 (5%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
CL A HA +N+F + L+ Y + R+A AR++FD++P D V +NT+I+
Sbjct: 124 CLHA--HAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVR 181
Query: 109 CGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASV 166
+ ++ +FKDM + D T++ ++ A + + + + CLA+ GF V
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
L++ +S+ +D A R+ + M D VS+N+++ + + E A++ F+E++
Sbjct: 242 LTGLISVFSKCEDVDTA-RLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T+ ++ + L +KSG + + L +Y++ + ++
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLN-EIDLA 359
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
++F+E + + WN MISGY+Q ++ A+ F+++ + P+ + ++SAC+
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSG-LTEMAISLFQEMMTTEFTPNPVTITSILSACAQ 418
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L S GK +H L IK + I V+ AL+ MY+KCGN+ +A +LFD E NTV+ N+
Sbjct: 419 LGALSFGKSVHQL-IKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNT 477
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI GY HG G EAL+LF ML P+++TF+SVL AC+H G V EG + F M + +
Sbjct: 478 MIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKY 537
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKA 508
EP EHY+CM+D+LGRAG+L A I MP PG ++A A
Sbjct: 538 RIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVA 597
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
+ +L+P N YV+L+NIY+ + + A++R ++ R + K PG + IEV HV
Sbjct: 598 SERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHV 657
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGY----------VPDKEKRLVH--HSEKLAVA 616
FV D SH I+ LEE++ KM++ GY V ++EK L+ HSEKLA+A
Sbjct: 658 FVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIA 717
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL++T G I ++KNLR+C DCH A KFIS I R I VRD RFH FKDG CSCGDY
Sbjct: 718 FGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDY 777
Query: 677 W 677
W
Sbjct: 778 W 778
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 222/419 (52%), Gaps = 19/419 (4%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR LF +P+PD+ +N LI ++ D S ++ D FT + I+AS +
Sbjct: 59 ARALFFSVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPD 118
Query: 144 N---LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+ +C LH A+ GFD V ++L+ Y + + A++VF +M + +D V WN
Sbjct: 119 DNLGMC----LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPD-RDTVLWN 173
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ ++ +++Q+F++MV+ + LD T+A++L A ++++ G+ +K
Sbjct: 174 TMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKL 233
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
GFH + ++ +GLI +++KC D+ +F I +PDLV +N +ISG+S E ++ A+
Sbjct: 234 GFHFDDYVLTGLISVFSKCE-DVDTARLLFGMIRKPDLVSYNALISGFSCNGE-TECAVK 291
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK-IEIRSNRI---SVNNALV 376
F++L G + V +I +S G A I+ ++S I SV+ AL
Sbjct: 292 YFRELLVSGQRVSSSTMVGLIP----VSSPFGHLHLACCIQGFCVKSGTILQPSVSTALT 347
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+YS+ ++ AR+LFD E + N+MI+GYAQ G+ A+ LF+ M+ T P +
Sbjct: 348 TIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPV 407
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
T S+LSACA G ++ G+ ++K E + +ID+ + G +++A +L +
Sbjct: 408 TITSILSACAQLGALSFGKSVHQLIKSK-NLEQNIYVSTALIDMYAKCGNISEASQLFD 465
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 15/259 (5%)
Query: 254 HAHLIKSGFHQN----SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
HA LI++G+ + + + L D+ G R +F +P+PD+ L+N +I G+S
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDV-----GATRHARALFFSVPKPDIFLFNVLIKGFS 82
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
+ S + L PD+ ++ ISA + +LG +HA + SN +
Sbjct: 83 FSPDASSISFYT-HLLKNTTLSPDNFTYAFAISASPD--DNLGMCLHAHAVVDGFDSN-L 138
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V +ALV +Y K + AR++FD+MP+ +TV N+MI G ++ +++++F+ M+
Sbjct: 139 FVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQ 198
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ + T +VL A A +V G + GF + + +I + + + D
Sbjct: 199 GVRLDSTTVATVLPAVAEMQEVKVGMG-IQCLALKLGFHFDDYVLTGLISVFSKCEDV-D 256
Query: 490 AERLIEAMPFNPGSIALKA 508
RL+ M P ++ A
Sbjct: 257 TARLLFGMIRKPDLVSYNA 275
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
+S +YS+ + A F+++ V ++N ++
Sbjct: 342 VSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMI----------------------- 378
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHC 153
S YA G TE A+SLF++M F + T++ +++A + L K +H
Sbjct: 379 --------SGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ 430
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
L + V+ +L+ Y++ G + EA ++F ++ K+ V+WN+M+ YG H G
Sbjct: 431 LIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKNTVTWNTMIFGYGLHGYGD 489
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSG 271
EAL+LF EM+ L T S+L A S LV G FHA + K + +
Sbjct: 490 EALKLFNEMLHLGFQPSSVTFLSVLYA-CSHAGLVREGDEIFHAMVNKYRIEPLAEHYAC 548
Query: 272 LIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
++D+ + +G + ++ ++P +P +W T++
Sbjct: 549 MVDILGR-AGQLEKALEFIRKMPVEPGPAVWGTLL 582
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GKS+H L + + Y+S I +Y+KCG +S A F+ T
Sbjct: 408 TITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLT 467
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N ++N ++ Y A +LF+++ QP V++ +++ A + G
Sbjct: 468 SEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGD 527
Query: 117 SLFKDMREK 125
+F M K
Sbjct: 528 EIFHAMVNK 536
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/663 (34%), Positives = 379/663 (57%), Gaps = 41/663 (6%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
L A H ++ + F + L+ Y + +A AR+LFD++P +V++N++IS++
Sbjct: 20 LRAVHTNVIKSGFSYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISH 79
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYAS- 165
G ++ A+ + +M + D +T S I+ + + L LI+ + H LA+ G +
Sbjct: 80 GKSKEAVEFYGNMLMEGVLPDAYTFSA-ISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGF 138
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V ++L+ Y++ + +A VF + E KD V + +++V Y QH EAL++F++MV+
Sbjct: 139 VASALVDMYAKFDKMRDAHLVFRRVLE-KDVVLFTALIVGYAQHGLDGEALKIFEDMVNR 197
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + YTLA IL +L DLV G H ++KSG + L+ +Y++C+ + D
Sbjct: 198 GVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNM-IED 256
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+KVF ++ + V W + + G Q + A+ F+++ R P+ + ++ ACS
Sbjct: 257 SIKVFNQLDYANQVTWTSFVVGLVQNGR-EEVAVSIFREMIRCSISPNPFTLSSILQACS 315
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+L+ +G+QIHA+T+K+ + N+ + AL+ +Y KCGN++ AR +FD + E + V++N
Sbjct: 316 SLAMLEVGEQIHAITMKLGLDGNKYA-GAALINLYGKCGNMDKARSVFDVLTELDVVAIN 374
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
SMI YAQ+G G EAL LFE + + P +TF+S+L AC + G V EG + F+ +++
Sbjct: 375 SMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNN 434
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALK 507
E +H++CMIDLLGR+ +L +A LIE + NP + A K
Sbjct: 435 HNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEK 493
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
+ L+L P + +++L N+YA++GKW +V ++ +RD ++K P SW++V +++H
Sbjct: 494 VMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVH 553
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAV 615
F+A D SHP EI L + +K+K GY P D+EK+ L +HSEKLA+
Sbjct: 554 TFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAI 613
Query: 616 AFGLLST-SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
A+ L T I + KNLR+CGDCH+ IKF+S + GR+I RD+ RFH FK G CSC
Sbjct: 614 AYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCK 673
Query: 675 DYW 677
DYW
Sbjct: 674 DYW 676
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 38/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C DLV G+ +H L +K+ + + +YS+C + + FNQ
Sbjct: 205 TLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQL 264
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+AN V++ + + G E A+S+F+
Sbjct: 265 DYANQ-------------------------------VTWTSFVVGLVQNGREEVAVSIFR 293
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + FTLS ++ A S+ L + +Q+H + + G D +L+ Y + G
Sbjct: 294 EMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCG 353
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+ VF + E+ D V+ NSM+ AY Q+ G EAL+LF+ + ++ L + T SIL
Sbjct: 354 NMDKARSVFDVLTEL-DVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISIL 412
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIPQP 296
A + + G Q A I++ + I + +IDL + S + + + EE+ P
Sbjct: 413 LACNNAGLVEEGCQIFAS-IRNNHNIELTIDHFTCMIDLLGR-SRRLEEAAMLIEEVRNP 470
Query: 297 DLVLWNTMIS 306
D+VLW T+++
Sbjct: 471 DVVLWRTLLN 480
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/641 (37%), Positives = 346/641 (53%), Gaps = 74/641 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ +YA R++FD++ ++V YN +I +Y + + L +F++M F D
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S NL +H + G D V N L+ Y + G L EA+RVF
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLED 246
EM KD VSWNSMV Y + +AL++ +EM D T+AS++ A TS E+
Sbjct: 179 EM-IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSEN 237
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ LY + K+F + + +L+ WN MI
Sbjct: 238 V---------------------------LYVE---------KIFVNLERKNLISWNVMIR 261
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIR 365
Y K QA+ + ++ + PD +F V+ AC +LS L G++IH K ++
Sbjct: 262 VY-MKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLC 320
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + N+L+ MY++CG L+DA+R+FDRM + S S+I+ Y G G A+ LF
Sbjct: 321 PNLL-LENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTE 379
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML + P +I FV++LSAC+H+G + EG+ YF M D + P EHY+C++DLLGRAG
Sbjct: 380 MLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAG 439
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
++ +A +I+ MP P I + AA++ LQL P + YV+L+N
Sbjct: 440 RVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSN 499
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G+W+EV IR +M+ + ++K PG S +E+ Q+H F+A D SHP KEI+ L
Sbjct: 500 IYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGV 559
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ KMK+ GYVP DKE L HSEKLA+ F LL+T + I + KNLR+
Sbjct: 560 LVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ-IRITKNLRV 618
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH A K IS I REI VRDT RFH FKDG CSCGDYW
Sbjct: 619 CGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 180/411 (43%), Gaps = 51/411 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C +L G +H LK + F+ ++ N I +Y KCGCL A F++
Sbjct: 121 TYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM 180
Query: 61 QHANVFSFNVLLAAYARQLRIASA----RQLFDQIPQPD--------------------- 95
+V S+N ++A YA +R A R++ D +PD
Sbjct: 181 IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLY 240
Query: 96 ------------LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
L+S+N +I Y A+ L+ M + R + D T + ++ A +
Sbjct: 241 VEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGD 300
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L +++H + NSL+ Y+R G LD+AKRVF M + +D SW S
Sbjct: 301 LSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRM-KFRDVASWTS 359
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ AYG +G A+ LF EM++ D +IL+A S L+ + + +
Sbjct: 360 LISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSA-CSHSGLLDEGRIYFKQMTDD 418
Query: 262 FHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQA 318
+ I + L+DL + +G + + + +++P +P+ +W T++S +++
Sbjct: 419 YRITPRIEHYACLVDLLGR-AGRVDEAYNIIKQMPIEPNERVWATLLSSC---RVFTNMD 474
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
+G N + P+ + ++ SN+ G+ I+ ++ +I
Sbjct: 475 IGILAADNLLQLAPEQSGYYVLL---SNIYAKAGRWKEVTEIRSVMKRKKI 522
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 232 YTLASILTAFTSL-------EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + ILT+F L D+ + H + HQN +G L+ YA C G+
Sbjct: 12 FFIQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAAC-GEPG 70
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF+E+ ++V +N MI Y Y D L F+++ G+ PD+ ++ CV+ AC
Sbjct: 71 LTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLL-VFREMVNGGFRPDNYTYPCVLKAC 129
Query: 345 SNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
S S +L G IH +K+ + N + V N L+AMY KCG L +ARR+FD M + VS
Sbjct: 130 S-CSENLRYGLLIHGDVLKVGLDFN-LFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVS 187
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
NSM+AGYA + +AL + M + P T S++ A A+T
Sbjct: 188 WNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANT 233
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/632 (37%), Positives = 360/632 (56%), Gaps = 44/632 (6%)
Query: 87 LFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF++ + + D+ S+N++I+ A GD+ AL F MR+ + I A S+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 146 CLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+ KQ H A G+ V+++L+ YS G L++A++VF E+ + ++ VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMI 149
Query: 204 VAYGQHREGLEALQLFQEMV------SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
Y + L+A+ LF++++ + LD + S+++A + + H+ +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFV 209
Query: 258 IKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
IK GF + +G+ L+D YAK G + K+F++I D V +N+++S Y+Q S+
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSN 268
Query: 317 QALGCFKKLNRVGYHPDDC-SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
+A F++L + +C + V+ A S+ +GK IH I++ + + I V +
Sbjct: 269 EAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTS 327
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
++ MY KCG +E AR FDRM N S +MIAGY HG +AL LF M+++ + P
Sbjct: 328 IIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITFVSVL+AC+H G G +F+ MK FG EP EHY CM+DLLGRAG L A LI
Sbjct: 388 YITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 495 EAMPFNPGSI---ALKAA--------------NHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ M P SI +L AA +L+PSN Y++L++IYA SG+W+
Sbjct: 448 QKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWK 507
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V +R M++RG+ K PGFS +E+ ++HVF+ D HP ++I+ +L E++RK+ +AG
Sbjct: 508 DVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 598 YVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV +KE L HSEKLA+AFG+++T G + V+KNLR+C DCHN IK
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS I RE VRD RFH FKDG CSCGDYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 212/437 (48%), Gaps = 29/437 (6%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
AF +++F + L+ Y+ ++ AR++FD+IP+ ++VS+ ++I Y G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 114 SALSLFKDMREKRFDTDG------FTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYAS 165
A+SLFKD+ + D D + +I+A S L + +H I GFD S
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219
Query: 166 VNNSLLTCYSR--NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V N+LL Y++ G + A+++F ++ + KD VS+NS++ Y Q EA +F+ ++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFDVFRRLI 278
Query: 224 SLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ + + TL+++L A + L G H +I+ G + +G+ +ID+Y KC G
Sbjct: 279 KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC-GR 337
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ F+ + ++ W MI+GY ++ +AL F + G P+ +FV V++
Sbjct: 338 VETARLAFDRMKNKNVRSWTAMIAGYGM-HGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 343 ACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHN 399
ACS+ L +A+ + + + +V + + G L+ A L +M E +
Sbjct: 397 ACSHAGLHDVGWHWFNAMKGRFGVEPG-LEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPD 455
Query: 400 TVSLNSMIAGYAQHG----IGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEG 454
++ +S++A H + RLFE + P+N + +LS A +G+ +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFE------LDPSNCGYYMLLSHIYADSGRWKDV 509
Query: 455 QKYFSMMKDMFGFEPEG 471
++ MK+ +P G
Sbjct: 510 ERVRMTMKNRGLVKPPG 526
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 36/200 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L GK +H ++ + + I +Y KCG + A AF++ ++ NV S+ ++A
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAG 362
Query: 75 YARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
Y A A +LF D +P+ +++ ++++A + G + F M+ +
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGR----- 417
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+ G +HY + + L R GFL +A + +M
Sbjct: 418 -----------------------FGVEPGLEHYGCMVDLL----GRAGFLQKAYDLIQKM 450
Query: 191 GEIKDEVSWNSMVVAYGQHR 210
D + W+S++ A H+
Sbjct: 451 KMEPDSIIWSSLLAACRIHK 470
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/661 (36%), Positives = 358/661 (54%), Gaps = 71/661 (10%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
CL A + Q ++F L+ YA ++ +R FDQIPQ D+ ++N++ISAY
Sbjct: 37 CLHALLVVAGKVQ--SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 109 CGDTESALSLFKDMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G A+ F + D +T ++ A L +++HC A GF V
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT-LVDGRKIHCWAFKLGFQWNVFVA 153
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
SL+ YSR GF A+ +F +M +D SWN+M+ Q+ +AL + EM +
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 212
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
++ T+ SIL F +D+YAK G +
Sbjct: 213 KMNFVTVVSILPVF-------------------------------VDMYAKL-GLLDSAH 240
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN 346
KVFE IP D++ WNT+I+GY+Q + +A+ +K + P+ ++V ++ A ++
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQNG-LASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 299
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+ G +IH IK + + + V L+ +Y KCG L DA LF ++P+ ++V+ N+
Sbjct: 300 VGALQQGMKIHGRVIKTNLHLD-VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 358
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+I+ + HG + L+LF ML+ + P ++TFVS+LSAC+H+G V EG+ F +M++ +
Sbjct: 359 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-Y 417
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--A 508
G +P +HY CM+DLLGRAG L A I+ MP P G+I L A
Sbjct: 418 GIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFA 477
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
++ +++ N YV+L+NIYA GKWE V +R L R+RG++K PG+S IEV +++ V
Sbjct: 478 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDV 537
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F + SHP KEI+ L ++ KMK GY+PD KE L HSE+LA+A
Sbjct: 538 FYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIA 597
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FG++ST PI + KNLR+CGDCHNA KFIS I REI VRD+ RFH FKDG CSCGDY
Sbjct: 598 FGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDY 657
Query: 677 W 677
W
Sbjct: 658 W 658
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 40 FILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-----P 94
F+ +Y+K G L +AH F +V S+N L+ YA+ + A +++ + + P
Sbjct: 226 FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 285
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL 154
+ ++ +++ AYA G + + + + + D F
Sbjct: 286 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVF---------------------- 323
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
V L+ Y + G L +A +FY++ + + V+WN+++ +G H +
Sbjct: 324 -----------VATCLIDVYGKCGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAEK 371
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN-SHIGSGLI 273
L+LF EM+ + D T S+L+A + + G + + G + H G ++
Sbjct: 372 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC-MV 430
Query: 274 DLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
DL + +G + +++P QPD +W ++
Sbjct: 431 DLLGR-AGYLEMAYDFIKDMPLQPDASIWGALL 462
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 41/197 (20%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G +H +K + +++ I +Y KCG
Sbjct: 303 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCG-------------------------- 336
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
R+ A LF Q+PQ V++N +IS + G E L LF +M ++ D T
Sbjct: 337 -----RLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 391
Query: 135 SGLITASSNNLCLIKQLHCL------AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
L++A S++ + + C I HY + + L R G+L+ A
Sbjct: 392 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLL----GRAGYLEMAYDFIK 447
Query: 189 EMGEIKDEVSWNSMVVA 205
+M D W +++ A
Sbjct: 448 DMPLQPDASIWGALLGA 464
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 338/628 (53%), Gaps = 57/628 (9%)
Query: 103 ISAYADCGDTESALSLFKDMREK---RFDTDGFTLSGLITASSNNL-CLIKQLHCLAIYC 158
I A A G A+SLF MR R + L + ++ L L LH LAI
Sbjct: 20 IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRS 79
Query: 159 GFDHYASVNNSLLTCYSRN--GFLDEA-----------------KRVFYEMGEIKDEVSW 199
G N+LL Y + +LD ++VF EM E +D VSW
Sbjct: 80 GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIE-RDVVSW 138
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
N++V+ + EAL ++M D +TL+++L F D+ GL+ H +
Sbjct: 139 NTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFR 198
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+GF + +GS LID+YA C+ +KVF+ +P D +LWN++++G +Q ++AL
Sbjct: 199 NGFDSDVFVGSSLIDMYANCT-RTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSV-EEAL 256
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
G F+++ + G P +F +I C NL S GKQ+HA I N + ++++L+ M
Sbjct: 257 GIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN-VFISSSLIDM 315
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KCG + A +FD+M + VS +MI GYA HG EAL LFE M N P +ITF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
++VL+AC+H G V +G KYF M + +G P EH++ + D LGRAG+L +A I M
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435
Query: 499 FNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + +A + A ++LEP + +V+L+N+Y+ASG+W E A
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
+R MR +G++K P SWIEVK ++HVFVA D SHP I + L S +M + G+VP+
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555
Query: 602 KEK------------RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
E L HSEKLA+ FG++ST G I VMKNLR+C DCH KFIS
Sbjct: 556 TEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISK 615
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+A REI VRD RFH FKDG CSCGD+W
Sbjct: 616 LADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C L GK LHA + + ++S+ I +Y KCG +S AH F++
Sbjct: 273 TFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKM 332
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S+ ++ YA A LF+++ +P+ +++ +++A + G +
Sbjct: 333 SSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGW 392
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M SN+ ++ L +H+A++ ++L R
Sbjct: 393 KYFKSM-------------------SNHYGIVPTL---------EHFAALADTL----GR 420
Query: 177 NGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LDEA +M +IK S W++++ A H+ + A ++ ++++ L+
Sbjct: 421 AGELDEAYNFISKM-QIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELE 470
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/658 (34%), Positives = 366/658 (55%), Gaps = 52/658 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ + N L+ Y + A ++FD +P+ ++VS++ L+S + GD + +LSLF +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 124 EKRFDTDGFTLS------GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + FT S GL+ A L Q+H + GF+ V NSL+ YS+
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGL----QIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM--VSLQLGLDMYTLA 235
G ++EA++VF + + + +SWN+M+ + G +AL F M +++ D +TL
Sbjct: 156 GRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A +S + G Q H L++SGFH ++ I L+DLY KC G + K F++I
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC-GYLFSARKAFDQI 273
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ ++ W+++I GY+Q+ E+ +A+G FK+L + D + +I ++ + G
Sbjct: 274 KEKTMISWSSLILGYAQEGEFV-EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
KQ+ AL +K+ SV N++V MY KCG +++A + F M + +S +I GY +
Sbjct: 333 KQMQALAVKLP-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG+G +++R+F ML NI P + +++VLSAC+H+G + EG++ FS + + G +P E
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQL 515
HY+C++DLLGRAG+L +A+ LI+ MP P G I L + L++
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ N YVM++N+Y +G W E R L +G++K+ G SW+E+++++H F + + S
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 571
Query: 576 HPMIKEIHNYLEEMSRKMKQA-GYV------------PDKEKRLVHHSEKLAVAFGLLS- 621
HP+ I L+E R++++ GYV KE+ L HSEKLA+ L +
Sbjct: 572 HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 631
Query: 622 --TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G+ I V KNLR+C DCH IK +S I VRD RFH F+DG CSCGDYW
Sbjct: 632 GLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLV--PFSAYLSNHFILLYSKCGCLSAAHHAFN 58
T +LK C + GK +H +++ P SA ++ + LY KCG L +A AF+
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q + + S++ L+ YA++ G+ A+ L
Sbjct: 272 QIKEKTMISWSSLILGYAQE-------------------------------GEFVEAMGL 300
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK ++E D F LS +I ++ L KQ+ LA+ SV NS++ Y +
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +DEA++ F EM ++KD +SW ++ YG+H G +++++F EM+ + D +
Sbjct: 361 CGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G + + L+++ G + ++DL + +G +++ + + +P
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR-AGRLKEAKHLIDTMPI 478
Query: 295 QPDLVLWNTMIS 306
+P++ +W T++S
Sbjct: 479 KPNVGIWQTLLS 490
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/713 (32%), Positives = 376/713 (52%), Gaps = 70/713 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C DL G+++HA HA
Sbjct: 101 TFPFVLKACSALADLCAGRTIHA-------------------------------HAAAVG 129
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H ++F L+ Y R R A +F ++P D+V++N +++ YA+ G A++
Sbjct: 130 LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLL 189
Query: 121 DMREKR-FDTDGFTLSGLITASSNNLCLIK----QLHCLAIYCG-FDHYASVNNSLLTCY 174
DM+++ + TL L+ + + L + +CL Y + + +LL Y
Sbjct: 190 DMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMY 249
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYT 233
++ L A RVF+ M +++EV+W++++ + EA LF++M V L +
Sbjct: 250 AKCKHLVYACRVFHGM-TVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+AS L SL DL G Q HA L KSG H + G+ L+ +YAK +G + + +F+EI
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAK-AGLINEATMLFDEI 367
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
D + + ++SGY Q + +++A FKK+ PD + V +I ACS+L+
Sbjct: 368 AIKDTISYGALLSGYVQNGK-AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG 426
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+ ++ I + S+ N+L+ MY+KCG ++ +R++FD+MP + VS N+MIAGY H
Sbjct: 427 RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIH 486
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EA LF M P ++TF+ +++AC+H+G V EG+ +F M +G P EH
Sbjct: 487 GLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEH 546
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y CM+DLL R G L +A + I++MP + + + +L
Sbjct: 547 YICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLG 606
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P +V+L+NI++A+G+++E A +R + + +G +K PG SWIE+ +H FV D SH
Sbjct: 607 PEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSH 666
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSEKLAVAFGLLSTSY 624
P +I++ L+ + +K+ GY D K L++HSEKLA+AFG+LS +
Sbjct: 667 PCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNE 726
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I V KNLR+CGDCH AIK+++ + R I VRD RFH FK+G+CSCGD+W
Sbjct: 727 DKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 217/428 (50%), Gaps = 15/428 (3%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
++A ARQ+FD+IP PD +YN LI AY+ G +A+ L++ M R + +T ++
Sbjct: 48 QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLK 107
Query: 140 ASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A S +LC + +H A G V+ +L+ Y R A VF +M ++D V
Sbjct: 108 ACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKM-PMRDVV 166
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
+WN+M+ Y H A+ +M L + TL S+L L G HA+
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 257 LIKSGFHQNSH---IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
+++ QN IG+ L+D+YAKC + C +VF + + V W+ +I G+ +
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYAC-RVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 314 YSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+ +A FK + G S + C++L+ +G Q+HAL K I ++ ++
Sbjct: 286 MT-EAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHAD-LTA 343
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N+L++MY+K G + +A LFD + +T+S ++++GY Q+G EA +F+ M N+
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403
Query: 432 PPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P T VS++ AC+H + G+ + S++ + G E + +ID+ + G++ +
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVI--IRGLALETSICNSLIDMYAKCGRIDLS 461
Query: 491 ERLIEAMP 498
++ + MP
Sbjct: 462 RQVFDKMP 469
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 172/379 (45%), Gaps = 25/379 (6%)
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A++VF + D ++N+++ AY A+ L++ M+ ++ + YT +
Sbjct: 47 GQLALARQVFDRI-PAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFV 105
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A ++L DL G HAH G H + + + LIDLY +C+ VF ++P D
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCA-RFGPAANVFAKMPMRD 164
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIH 356
+V WN M++GY+ Y +R G P+ + V ++ + G +H
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224
Query: 357 ALTIKIEIRSN--RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
A ++ + N ++ + AL+ MY+KC +L A R+F M N V+ +++I G+
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCD 284
Query: 415 IGMEALRLFEWMLETNIPPTNITFV-SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
EA LF+ ML + + T V S L CA + G + +++ G +
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS-GIHADLTA 343
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ ++ + +AG + +A L + IA+K + + Y L + Y +
Sbjct: 344 GNSLLSMYAKAGLINEATMLFD-------EIAIK-----------DTISYGALLSGYVQN 385
Query: 534 GKWEEVATIRRLMRDRGVQ 552
GK EE + + M+ VQ
Sbjct: 386 GKAEEAFLVFKKMQACNVQ 404
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 360/643 (55%), Gaps = 30/643 (4%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ +V N +L Y + A +LFD++ + VS T+ISAYA+ G + A+ LF
Sbjct: 112 ENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFS 171
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E + L+ + N L + +Q+H I G AS+ ++ Y + G
Sbjct: 172 RMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCG 231
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+L AKRVF +M +K V+W ++V Y Q +AL+LF ++++ + D + + +L
Sbjct: 232 WLVGAKRVFDQMA-VKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVL 290
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SLE+L G Q HA + K G +G+ L+D Y KCS C + F+EI +P+
Sbjct: 291 KACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESAC-RAFQEIREPND 349
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
V W+ +ISGY Q ++ ++A+ FK L ++ + ++ + ACS L+ ++G Q+H
Sbjct: 350 VSWSAIISGYCQMSQF-EEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVH 408
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A IK + ++ +AL+ MYSKCG L+DA +F+ M + V+ + I+G+A +G
Sbjct: 409 ADAIKRSLIGSQYG-ESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNA 467
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EALRLFE M+ + P ++TF++VL+AC+H G V +G+ Y M + P +HY C
Sbjct: 468 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDC 527
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSN 519
MID+ R+G L +A R ++ MPF P +++ K A QL+P +
Sbjct: 528 MIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPED 587
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+ N+Y +GKWEE A + +LM +R ++K+ SWI+ K ++H F+ D HP
Sbjct: 588 TAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQS 647
Query: 580 KEIHNYLEEMSRKMKQAGY---VPDKEKRLVHHSEKLAVAFGLLSTSYG--EPILVMKNL 634
+EI+ L+E M+ + + ++ ++L+ HSE+LA+AFGL+S + PI V KNL
Sbjct: 648 QEIYEKLKEFDGFMEGDMFQCSMTERREQLLDHSERLAIAFGLISVNGNARAPIKVFKNL 707
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R C DCH K +S + G EI +RD+ RFH FK+G+CSC DYW
Sbjct: 708 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 60/323 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK C +L GK +HA K + + + Y KC +A AF +
Sbjct: 285 VFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEI 344
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N S ++ +IS Y E A+ FK
Sbjct: 345 REPNDVS-------------------------------WSAIISGYCQMSQFEEAVKTFK 373
Query: 121 DMREKR-FDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+R K + FT + + A S + + Q+H AI ++L+T YS+
Sbjct: 374 SLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 433
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LD+A VF M D V+W + + + + EAL+LF++MVS + + T ++
Sbjct: 434 GCLDDAHEVFESMDN-PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 492
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH------QNSHIGSG------LIDLYAKCSGDMRD 285
LTA + HA L++ G H + ++ +ID+YA+ SG + +
Sbjct: 493 LTACS-----------HAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYAR-SGLLDE 540
Query: 286 CMKVFEEIP-QPDLVLWNTMISG 307
++ + +P +PD + W +SG
Sbjct: 541 ALRFMKNMPFEPDAMSWKCFLSG 563
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNA 374
++A F+++++ G S+ C+ AC L S S G+ +H +++ I + + + N
Sbjct: 63 NEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHN-RMRMGIENPSVLLQNC 121
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
++ MY +CG+LEDA +LFD M + N VS +MI+ YA+ G+ +A+ LF MLE+ P
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPP 181
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ + ++L + + + G++ + + G + ++++ + G L A+R+
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRA-GLCSNASIETGIVNMYVKCGWLVGAKRVF 240
Query: 495 EAM 497
+ M
Sbjct: 241 DQM 243
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 98/250 (39%), Gaps = 50/250 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ + + C D G +HA +K + S Y + I +YSKCGCL AH
Sbjct: 387 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAH------ 440
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F+ + PD+V++ IS +A G+ AL LF+
Sbjct: 441 -------------------------EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 475
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M + T ++TA S+ + + H L + DHY + ++
Sbjct: 476 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHY----DCMIDI 531
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-------GLEALQLFQE-MVSL 225
Y+R+G LDEA R M D +SW + H+ G E QL E
Sbjct: 532 YARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGY 591
Query: 226 QLGLDMYTLA 235
L ++YT A
Sbjct: 592 VLPFNLYTWA 601
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/735 (33%), Positives = 376/735 (51%), Gaps = 108/735 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL +C G+ +HA K+ ++ N I LY +CG A F H +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISA--------------- 105
+FN L++ +A+ A ++F+++ PD V+ ++L++A
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 106 --------------------YADCGDTESAL----------------------------- 116
Y CGD E+AL
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 117 --SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
LF M+ + FT ++ + + L +Q+H L++ GF+ V+ L+
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G+L++A+RV EM + KD VSW SM+ Y QH +AL F+EM + D
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
LAS ++ + + GLQ HA + SG+ + I + L++LYA+C G +R+ FEE
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC-GRIREAFSSFEE 506
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
I D + WN ++SG++Q + ++AL F ++++ G + +FV +SA +NL+
Sbjct: 507 IEHKDEITWNGLVSGFAQSGLH-EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQ 565
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIHA IK S V NAL+++Y KCG+ EDA+ F M E N VS N++I +
Sbjct: 566 GKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG G+EAL LF+ M + I P ++TF+ VL+AC+H G V EG YF M D +G P
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQ 514
+HY+C+ID+ GRAG+L A++ IE MP ++ + AA H L+
Sbjct: 685 DHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLE 744
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP ++ YV+L+N YA + KW +R++MRDRGV+K+PG SWIEVK +H F D
Sbjct: 745 LEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 804
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVP-------DKEKR------LVHHSEKLAVAFGLLS 621
HP+ ++I+N+L ++ ++ + GY DKE+ LV HSEKLAV FGL+S
Sbjct: 805 LHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV-HSEKLAVTFGLMS 863
Query: 622 TSYGEPILVMKNLRI 636
P+ V+KNLR+
Sbjct: 864 LPPCMPLRVIKNLRV 878
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/603 (27%), Positives = 290/603 (48%), Gaps = 47/603 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ Y++ + AR++F+++ D VS+ ++S YA G E AL L++ M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS ++++ + + +H GF V N+++T Y R G A+RV
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M +D V++N+++ + Q G AL++F+EM L D T++S+L A SL D
Sbjct: 201 FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L K+G + + L+DLY KC GD+ + +F + ++VLWN M+
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC-GDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIR 365
+ Q + + ++ F ++ G P+ ++ C++ C+ LG+QIH+L++K
Sbjct: 319 AFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK G LE ARR+ + + E + VS SMIAGY QH +AL F+
Sbjct: 378 SD-MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + I P NI S +S CA + +G + + + + G+ + ++ +++L R G
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCG 495
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ + A + F ++E + + + L + +A SG EE +
Sbjct: 496 RIRE------------------AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMR 537
Query: 546 MRDRGVQ-----------KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
M GV+ + I+ KQ+H V + G H E+ N L + K
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGK-- 594
Query: 595 QAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNAIKFIS 648
G D + SE+ V++ + TS E + + ++ G N + FI
Sbjct: 595 -CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIG 653
Query: 649 AIA 651
+A
Sbjct: 654 VLA 656
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 193/391 (49%), Gaps = 9/391 (2%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVN 167
D LSLF D + + + A N ++ ++H A+ G Y V
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVG 80
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ YS+NG + A+RVF E+ +D VSW +M+ Y Q+ G EAL L+++M +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGV 139
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
Y L+S+L++ T E G HA K GF +G+ +I LY +C G R
Sbjct: 140 VPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC-GSFRLAE 198
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++P D V +NT+ISG++Q + + AL F+++ G PD + +++AC++L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQC-GHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G Q+H+ K I S+ I + +L+ +Y KCG++E A +F+ N V N M
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLM 316
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ + Q ++ LF M I P T+ +L C T ++ G++ S+ G
Sbjct: 317 LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-G 375
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FE + +ID+ + G L A R++E +
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 328/563 (58%), Gaps = 32/563 (5%)
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
N+ IKQ+H G H V N LL +++ L A +F +M E +D VSW+ M+
Sbjct: 15 NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEE-RDPVSWSVMI 73
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ ++ + Q F+E++ D ++L ++ A L+ G H+ ++K+G H
Sbjct: 74 GGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLH 133
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
++ + S L+D+YAKC G + + ++F+ +P+ DLV MI+GY++ + +++ F
Sbjct: 134 LDNFVCSTLVDMYAKC-GMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK-PNESWVLFD 191
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
++ R G+ PD + V +++AC+ L ++ + S + + A++ MY+KCG
Sbjct: 192 QMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCG 251
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+++ +R +FDRM + N +S ++MI Y HG G EAL LF ML + I P ITF+S+L
Sbjct: 252 SIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLY 311
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG- 502
AC+H G V +G + FS+M +G P+ +HY+CM+DLLGRAG+L A RLIE M
Sbjct: 312 ACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDE 371
Query: 503 ----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+A KAA L L+ N Y++L+NIYA +G+W++VA IR LM
Sbjct: 372 GIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLM 431
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRL 606
R ++K PG++WIEV ++ F A D SH EI+ L+ +S+K++ AGYVPD L
Sbjct: 432 AKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVL 491
Query: 607 -----------VH-HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
+H HSEKLA+AFGL++T G PI + KNLR+CGDCH+ K +SAI R+
Sbjct: 492 HDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRD 551
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD RFH FK+G CSCGDYW
Sbjct: 552 IIVRDANRFHHFKEGICSCGDYW 574
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 141/304 (46%), Gaps = 43/304 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V+K C L+ G+ +H+ LKN + ++ + + +Y+KCG
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCG---------------- 150
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
I +A+QLFD++P+ DLV+ +I+ YA+CG + LF MR
Sbjct: 151 ---------------MIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR 195
Query: 125 KRFDTDGFTLSGLITASS-----NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
F D + ++ A + N L+ C Y D + +++ Y++ G
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRY-SLD--VELGTAMIDMYAKCGS 252
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D ++ +F M E K+ +SW++M+ AYG H +G EAL+LF M++ + + T S+L
Sbjct: 253 IDSSREIFDRM-EQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLY 311
Query: 240 AFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPD 297
A + + GLQ F + G + + ++DL + +G + +++ E + + D
Sbjct: 312 ACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGR-AGRLDQALRLIENMEVEKD 370
Query: 298 LVLW 301
+W
Sbjct: 371 EGIW 374
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/663 (35%), Positives = 349/663 (52%), Gaps = 75/663 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG--FTLSGLITAS 141
A+QLFD IPQPD + +TLISA+ G A+ L+ +R + F +
Sbjct: 85 AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGA 144
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
S + +K++H AI CG A + N+L+ Y + ++ A+RVF ++ +KD VSW S
Sbjct: 145 SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDL-VVKDVVSWTS 203
Query: 202 MVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
M Y G R GL +F EM + + TL+SIL A + L+DL G H +
Sbjct: 204 MSSCYVNCGLPRLGL---AVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAV 260
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY---- 314
+ G +N + S L+ LYA+C ++ VF+ +P D+V WN +++ Y EY
Sbjct: 261 RHGMIENVFVCSALVSLYARCL-SVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319
Query: 315 ------------------------------SDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+++A+ +K+ +G+ P+ + + AC
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379
Query: 345 SNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S L S +GK++H + + + ++ ALV MY+KCG+L +R +FD + + V+
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGD-LTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAW 438
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI A HG G E L LFE ML++ I P ++TF VLS C+H+ V EG + F+ M
Sbjct: 439 NTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGR 498
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA--------------- 508
EP+ HY+CM+D+ RAG+L +A I+ MP P + A A
Sbjct: 499 DHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAK 558
Query: 509 --ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AN ++EP+N YV L NI + W E + R LM++RG+ K PG SW++V ++
Sbjct: 559 ISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRV 618
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H FV D ++ +I+N+L+E+ KMK AGY PD K + L HSEKLA
Sbjct: 619 HTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLA 678
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
VAFG+L+ + I V KNLRICGDCHNAIK++S + G I VRD+ RFH F++G CSC
Sbjct: 679 VAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQ 738
Query: 675 DYW 677
D W
Sbjct: 739 DLW 741
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 199/485 (41%), Gaps = 79/485 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F V K C D K +H ++ + A+L N I Y KC C
Sbjct: 134 VFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKC----------- 182
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + D+VS+ ++ S Y +CG L++F
Sbjct: 183 --------------------VEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFC 222
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + TLS ++ A S +L + +H A+ G V ++L++ Y+R
Sbjct: 223 EMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCL 282
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS-------------- 224
+ +A+ VF M +D VSWN ++ AY +RE + L LF +M S
Sbjct: 283 SVKQARLVFDLMPH-RDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVI 341
Query: 225 ---------------------LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
L + T++S L A + LE L G + H ++ +
Sbjct: 342 GGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLI 401
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+ + L+ +YAKC GD+ VF+ I + D+V WNTMI + + L F+
Sbjct: 402 GDLTTMTALVYMYAKC-GDLNLSRNVFDMICRKDVVAWNTMIIANAMHGN-GREVLLLFE 459
Query: 324 KLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
+ + G P+ +F V+S CS+ G QI + + + +V ++S+
Sbjct: 460 SMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRA 519
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME-----ALRLFEWMLETNIPPTNIT 437
G L +A RMP T S + G + +E A +LFE +E N P ++
Sbjct: 520 GRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFE--IEPNNPGNYVS 577
Query: 438 FVSVL 442
++L
Sbjct: 578 LFNIL 582
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 17/240 (7%)
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
SH+G L+ A GD R ++F+ IPQPD +T+IS ++ + ++A+ + L
Sbjct: 66 SHLGLRLLK-AALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRG-LPNEAIRLYASL 123
Query: 326 NRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G P + F+ V AC ++ S K++H I+ + S+ + NAL+ Y KC
Sbjct: 124 RARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAF-LGNALIHAYGKCKC 182
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E ARR+FD + + VS SM + Y G+ L +F M + P ++T S+L A
Sbjct: 183 VEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPA 242
Query: 445 CAHTGKVAEGQKY------FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
C+ + G+ M++++F S ++ L R + A + + MP
Sbjct: 243 CSELKDLKSGRAIHGFAVRHGMIENVF-------VCSALVSLYARCLSVKQARLVFDLMP 295
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/735 (33%), Positives = 376/735 (51%), Gaps = 108/735 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL +C G+ +HA K+ ++ N I LY +CG A F H +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISA--------------- 105
+FN L++ +A+ A ++F+++ PD V+ ++L++A
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 106 --------------------YADCGDTESAL----------------------------- 116
Y CGD E+AL
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 117 --SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
LF M+ + FT ++ + + L +Q+H L++ GF+ V+ L+
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G+L++A+RV EM + KD VSW SM+ Y QH +AL F+EM + D
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
LAS ++ + + GLQ HA + SG+ + I + L++LYA+C G +R+ FEE
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC-GRIREAFSSFEE 506
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
I D + WN ++SG++Q + ++AL F ++++ G + +FV +SA +NL+
Sbjct: 507 IEHKDEITWNGLVSGFAQSGLH-EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQ 565
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIHA IK S V NAL+++Y KCG+ EDA+ F M E N VS N++I +
Sbjct: 566 GKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG G+EAL LF+ M + I P ++TF+ VL+AC+H G V EG YF M D +G P
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQ 514
+HY+C+ID+ GRAG+L A++ IE MP ++ + AA H L+
Sbjct: 685 DHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLE 744
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP ++ YV+L+N YA + KW +R++MRDRGV+K+PG SWIEVK +H F D
Sbjct: 745 LEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 804
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVP-------DKEKR------LVHHSEKLAVAFGLLS 621
HP+ ++I+N+L ++ ++ + GY DKE+ LV HSEKLAV FGL+S
Sbjct: 805 LHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV-HSEKLAVTFGLMS 863
Query: 622 TSYGEPILVMKNLRI 636
P+ V+KNLR+
Sbjct: 864 LPPCMPLRVIKNLRV 878
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 290/604 (48%), Gaps = 47/604 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ Y++ + AR++F+++ D VS+ ++S YA G E AL L++ M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS ++++ + + +H GF V N+++T Y R G A+RV
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M +D V++N+++ + Q G AL++F+EM L D T++S+L A SL D
Sbjct: 201 FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L K+G + + L+DLY KC GD+ + +F + ++VLWN M+
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC-GDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIR 365
+ Q + + ++ F ++ G P+ ++ C++ C+ LG+QIH+L++K
Sbjct: 319 AFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK G LE ARR+ + + E + VS SMIAGY QH +AL F+
Sbjct: 378 SD-MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + I P NI S +S CA + +G + + + + G+ + ++ +++L R G
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCG 495
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ + A + F ++E + + + L + +A SG EE +
Sbjct: 496 RIRE------------------AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMR 537
Query: 546 MRDRGVQ-----------KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
M GV+ + I+ KQ+H V + G H E+ N L + K
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGK-- 594
Query: 595 QAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNAIKFIS 648
G D + SE+ V++ + TS E + + ++ G N + FI
Sbjct: 595 -CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIG 653
Query: 649 AIAG 652
+A
Sbjct: 654 VLAA 657
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 193/391 (49%), Gaps = 9/391 (2%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVN 167
D LSLF D + + + A N ++ ++H A+ G Y V
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVG 80
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ YS+NG + A+RVF E+ +D VSW +M+ Y Q+ G EAL L+++M +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGV 139
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
Y L+S+L++ T E G HA K GF +G+ +I LY +C G R
Sbjct: 140 VPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC-GSFRLAE 198
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++P D V +NT+ISG++Q + + AL F+++ G PD + +++AC++L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQC-GHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G Q+H+ K I S+ I + +L+ +Y KCG++E A +F+ N V N M
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLM 316
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ + Q ++ LF M I P T+ +L C T ++ G++ S+ G
Sbjct: 317 LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-G 375
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FE + +ID+ + G L A R++E +
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/646 (34%), Positives = 359/646 (55%), Gaps = 36/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F + L+ AY+ ++ A +F+ I + D V + ++S Y++ E+A +F MR
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F L+ ++ A+ ++ L K +H AI D V +LL Y++ G +
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 315
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A R+ +EM D + + M+ Y Q + +A +LF ++ + + Y+L+S+L A
Sbjct: 316 DA-RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T++ L G Q H H IK G + +G+ L+D YAKC+ DM +K+F + + V W
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN-DMDSSLKIFSSLRDANEVSW 433
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTI 360
NT++ G+SQ ++AL F ++ ++ V+ AC S S QIH +I
Sbjct: 434 NTIVVGFSQ-SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC-SI 491
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ +N + N+L+ Y+KCG + DA ++F + E + +S N++I+GYA HG +AL
Sbjct: 492 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 551
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+ M ++N+ +ITFV++LS C+ TG V G F M+ G +P EHY+C++ L
Sbjct: 552 ELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPY 523
LGRAG+L DA + I +P P ++ +A A L++EP + Y
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTY 671
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YAA+G ++VA +R+ MR+ GV+K PG SW+E+K ++H F HP ++ I+
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVIN 731
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
LE ++ K + GY+PD K + L HSE+LA+A+GL+ T G PI ++
Sbjct: 732 AMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRIL 791
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR C DCH A IS I REI VRD RFH F+DG+CSCGDYW
Sbjct: 792 KNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 240/436 (55%), Gaps = 10/436 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F NVLL Y + +ASAR+LFD++P+ ++VS+ TL+ A+A GD E+A +LF+ +R
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + F L+ + + + + L +H A G DH A V + L+ YS +
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A+ VF + KD V W +MV Y ++ A ++F +M + + L S+L A
Sbjct: 215 DAEHVFNGIVR-KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAA 273
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L +V G H IK+ H+G L+D+YAKC GD++D FE IP D++L
Sbjct: 274 VCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC-GDIKDARLAFEMIPYDDVILL 332
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
+ MIS Y+Q + ++QA F +L R P++ S V+ AC+N+ GKQIH I
Sbjct: 333 SFMISRYAQSNQ-NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAI 391
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
KI S+ + V NAL+ Y+KC +++ + ++F + + N VS N+++ G++Q G+G EAL
Sbjct: 392 KIGHESD-LFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAE-GQKYFSMMKDMFGFEPEGEHYSCMID 479
+F M +P T +T+ SVL ACA T + GQ + S+ K F + + +ID
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST--FNNDTVIGNSLID 508
Query: 480 LLGRAGKLTDAERLIE 495
+ G + DA ++ +
Sbjct: 509 TYAKCGYIRDALKVFQ 524
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 19/306 (6%)
Query: 209 HREGLEA----LQLFQ-EMVSLQL-----GLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
HR G A LQ + E+ SL + G+D + A L + D GG H H++
Sbjct: 27 HRRGFAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVV 86
Query: 259 KSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+ G + + L+++Y K G + ++F+ +P+ ++V + T++ ++Q+ ++ +
Sbjct: 87 RRGGVGRLDLFCANVLLNMYGKL-GPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF-E 144
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVIS-ACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
A F++L G+ + ++ A + + L +H+ K+ N V + L
Sbjct: 145 AAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAF-VGSGL 203
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+ YS C + DA +F+ + + V +M++ Y+++ A R+F M + P
Sbjct: 204 IDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNP 263
Query: 436 ITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
SVL A V G+ + +K + EP ++D+ + G + DA
Sbjct: 264 FALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVG--GALLDMYAKCGDIKDARLAF 321
Query: 495 EAMPFN 500
E +P++
Sbjct: 322 EMIPYD 327
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C + +H K+ + N I Y+KCG + A F
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
++ S+N +++ YA + A A +LFD++ + ++ +++ L+S + G L
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGL 586
Query: 117 SLFKDMR 123
SLF MR
Sbjct: 587 SLFDSMR 593
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 355/645 (55%), Gaps = 65/645 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A + + + ++ S+N++I+ A GD+ AL F +R+ GLI S+
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKL----------GLIPTRSS 1144
Query: 144 NLCLIKQLHCL------------AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
C IK L A GF+ V+++L+ YS+ G L +A+ +F E+
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI- 1203
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ--------LGLDMYTLASILTAFTS 243
+++ VSW SM+ Y Q+ + AL LF++ + + + LD + S+L+A +
Sbjct: 1204 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+ H ++K GF + +G+ L+D YAKC G KVF+ + + D + WN+
Sbjct: 1264 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKC-GQPLVSKKVFDWMEEKDDISWNS 1322
Query: 304 MISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
MI+ Y+Q S +AL F + R VG + + V+ AC++ GK IH IK
Sbjct: 1323 MIAVYAQ-SGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 1381
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+++ N + V +++ MY KCG +E A++ FDRM E N S +M+AGY HG EAL
Sbjct: 1382 MDLEYN-VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALD 1440
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+F M+ + P ITFVSVL+AC+H G V EG +F+ MK + EP EHY CM+DL
Sbjct: 1441 IFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLF 1500
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYV 524
GRAG L +A LI+ M P + AA +L+P N YV
Sbjct: 1501 GRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYV 1560
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N+YA +G+W +V +R LM++R + K PGFS +E+K ++HVF+ D HP + I+
Sbjct: 1561 LLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYK 1620
Query: 585 YLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
YLE+++ ++++ GYVP +KE L HSEKLAVAFG+++++ G I ++K
Sbjct: 1621 YLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIK 1680
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCH IK IS + R+ VRD+ RFH FKDG CSCGDYW
Sbjct: 1681 NLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 189/376 (50%), Gaps = 38/376 (10%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
++Q+H I G + + L+ YS +G + A +FY++ + +WN ++ A
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-QNPCTFTWNLIIRANT 101
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ +AL L++ MV + D +T ++ A T+ + G H LIK GF +
Sbjct: 102 INGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVF 161
Query: 268 IGSGLIDLYAKCS------------------------------GDMRDCMKVFEEIPQPD 297
+ + LID Y KC GD+++ ++F+EIP +
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+V W MI+GY + ++ ++AL FK++ P++ + V +I AC+ + +LG+ IH
Sbjct: 222 VVSWTAMINGYIRNQQ-PEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH 280
Query: 357 ALTIK--IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IK IEI + + AL+ MYSKCG+++DA +F+ MP + + NSMI HG
Sbjct: 281 DYAIKNCIEIG---VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+G EAL LF M N+ P ITF+ VL AC H V EG YF+ M +G P EHY
Sbjct: 338 LGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHY 397
Query: 475 SCMIDLLGRAGKLTDA 490
CM +L R+ L +A
Sbjct: 398 ECMTELYARSNNLDEA 413
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 36/310 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y+ RIA A LF QI P ++N +I A G +E AL L+K+M + D
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 131 GFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCY-------------- 174
FT +I A +N L L K +H I GF V N+L+ Y
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 175 ---SRN--------------GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
RN G L EA+R+F E+ K+ VSW +M+ Y ++++ EAL+
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS-KNVVSWTAMINGYIRNQQPEEALE 243
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF+ M + + + YT+ S++ A T + L G H + IK+ ++G+ LID+Y+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC G ++D ++VFE +P+ L WN+MI+ +AL F ++ RV PD +F
Sbjct: 304 KC-GSIKDAIEVFETMPRKSLPTWNSMITSLGV-HGLGQEALNLFSEMERVNVKPDAITF 361
Query: 338 VCVISACSNL 347
+ V+ AC ++
Sbjct: 362 IGVLCACVHI 371
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 5/296 (1%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C + GK +H +K ++ N+ I Y KCG A F +
Sbjct: 127 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV S+ +++ + AR++FD+IP ++VS+ +I+ Y E AL LFK
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 246
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + + +T+ LI A + L L + +H AI + + +L+ YS+ G
Sbjct: 247 RMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCG 306
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A VF M K +WNSM+ + G H G EAL LF EM + + D T +L
Sbjct: 307 SIKDAIEVFETMPR-KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
A ++++ G + + + G + +LYA+ S ++ + K +E+
Sbjct: 366 CACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYAR-SNNLDEAFKSTKEV 420
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HA +I+SG + + LI LY+ G + + +F +I P WN +I +
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYST-HGRIAYAILLFYQIQNPCTFTWNLIIRA-NTI 102
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRIS 370
S+QAL +K + G D +F VI AC+N LS LGK +H IK S +
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF-SGDVF 161
Query: 371 VNNALVAMYSKCG-------------------------------NLEDARRLFDRMPEHN 399
V N L+ Y KCG +L++ARR+FD +P N
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
VS +MI GY ++ EAL LF+ M NI P T VS++ AC G + G+
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 460 -MMKDMFGFEPEGEHY-SCMIDLLGRAGKLTDAERLIEAMP 498
+K+ G + + +ID+ + G + DA + E MP
Sbjct: 282 YAIKNCIEI---GVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H +K + ++ + I +Y KCG + A F++
Sbjct: 1355 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++A Y R A +F ++ +P+ +++ ++++A + G E
Sbjct: 1415 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 1474
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+ K +D I G +HY ++ + R
Sbjct: 1475 HWFNAMKHK-YD---------------------------IEPGIEHYG----CMVDLFGR 1502
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G L+EA + M D V W S++ A H+
Sbjct: 1503 AGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHK 1536
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/634 (37%), Positives = 363/634 (57%), Gaps = 47/634 (7%)
Query: 87 LFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN-- 143
LF++ + D+ S+N+LI+ A GD+ +L F MR+ + T I + S
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+L KQ H A+ GF+ V+++L+ YS+ G L A+ +F E+ ++ V+W S++
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR-RNIVTWTSLI 155
Query: 204 VAYGQHREGLEALQLFQEMV---------SLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
Y Q+ + EAL +F+E + + +D + S+L+A + + + H
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
IK G + + + L+D YAKC G++ KVF+++ + D+V WN+MI+ Y+Q
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKC-GEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLS 274
Query: 315 SDQALGCFKKLNRVGYHP-DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+D A F + + G ++ + ++ AC++ +G +H IK+ +N I +
Sbjct: 275 TD-AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVI-MA 332
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
+++ MY KCG E AR FD M E N S +MIAGY HG EAL +F M+ +
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVK 392
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P ITF+SVL+AC+H G + EG ++F+ M + EP EHY CM+DLLGRAG + +A
Sbjct: 393 PNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYN 452
Query: 493 LIEAMPFNP-----GS------------IALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
LI++M GS +A +A +L+PSN YV+LANIYA +G+
Sbjct: 453 LIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGR 512
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
W++V +R L++DRG+ K PG+S +E+K ++HVF+ D HP ++I+ YLEE+S K+++
Sbjct: 513 WKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQE 572
Query: 596 AGYVP----------DKEKRLV--HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
AGYVP ++EK ++ HSEKLAVAFG++++ G I V+KNLR+CGDCH
Sbjct: 573 AGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTV 632
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IK IS I REI VRD RFH FKDG CSCGDYW
Sbjct: 633 IKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C + + +H + +K + + N + Y+KCG +S + F+ +
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKD 257
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V S+N ++A YA+ A ++F + + YN +
Sbjct: 258 VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEV---------------------- 295
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
TLS L+ A ++ L LH I G+ + + S++ Y + G +
Sbjct: 296 --------TLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEM 347
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ F M E K+ SW +M+ YG H EAL +F +M+ + + T S+L A +
Sbjct: 348 ARNAFDGMKE-KNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACS 406
Query: 243 SLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
L G ++ H + ++ G H G ++DL + +G +++ + + + +
Sbjct: 407 HAGFLEEGWRWFNAMSHEYNVEPGVE---HYGC-MVDLLGR-AGYIKEAYNLIKSMKVRR 461
Query: 297 DLVLWNTMISG 307
D VLW ++++
Sbjct: 462 DFVLWGSLLAA 472
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 40/228 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L G LH +K + ++ I +Y KCG A +AF+
Sbjct: 296 TLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGM 355
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++A Y A +F Q+ +P+ +++ ++++A + G E
Sbjct: 356 KEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGW 415
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M H + G +HY + + L R
Sbjct: 416 RWFNAMS----------------------------HEYNVEPGVEHYGCMVDLL----GR 443
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE----GLEALQLFQ 220
G++ EA + M +D V W S++ A H++ + A +LF+
Sbjct: 444 AGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFK 491
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 361/649 (55%), Gaps = 38/649 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N+ N LL+ Y+ R A +F ++P+ DL+S+N++++ Y G AL +F +M
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + + T + + A + K LH + G + N+L+T Y + +
Sbjct: 354 LWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKM 413
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASILT 239
EAK+VF M ++ D+V+WN+++ + + E EA+ F+ M G+D T+ +IL
Sbjct: 414 AEAKKVFQRMPKL-DKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILG 472
Query: 240 AFTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ + EDL+ G+ HAH + +GF + H+ S LI +YAKC GD+ +F+++
Sbjct: 473 SCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKC-GDLHSSSYIFDQLVFKTS 531
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
+WN +I+ + + + ++AL ++ G D +F +S ++L+ G+Q+H
Sbjct: 532 SVWNAIIAA-NARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHG 590
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
TIK+ + +N A+ MY KCG L+DA R+ + + + +S N++I+ A+HG
Sbjct: 591 STIKLGFELDHFIINAAM-DMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFH 649
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A F ML+ + P +++FV +LSAC+H G V EG Y++ M ++G +P EH CM
Sbjct: 650 KAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCM 709
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNA 520
IDLLGR+G+L +AE I MP P + KAA H L+L+PS+
Sbjct: 710 IDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDD 769
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+ +N++A G+WE+V +R M +QKKP SW++ K + +F D +HP ++
Sbjct: 770 SAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQME 829
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ L + + + +AGYVPD KE + HSE++A+AFGL++ G +
Sbjct: 830 QINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTV 889
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+ KF+S + GR+I +RD YRFH F +G CSC DYW
Sbjct: 890 RIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 214/428 (50%), Gaps = 9/428 (2%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y++ RI A+ +FD++ + + S+N ++S Y G A+ F+D+ GF +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 135 SGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+ L+TA + + + K Q H AI CG + V S + Y+ G + A+++F EM
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+ ++ VSW S++V+Y + E + ++ M + + +A ++++ L D++ G
Sbjct: 122 D-RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q H +K G + LI ++ C GD+ + +F E+ + D + WN++IS +Q
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGC-GDINEACSIFNEMNERDTISWNSIISANAQN 239
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRIS 370
+ +++ F + V + + ++S C ++ GK +H L +K + SN I
Sbjct: 240 TLH-EESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESN-IC 297
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ N L+++YS G +DA +F RMPE + +S NSM+A Y Q G + AL++F ML
Sbjct: 298 LCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK 357
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+TF S L+AC G K + G + E + +I G+ K+ +A
Sbjct: 358 KEINYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEA 416
Query: 491 ERLIEAMP 498
+++ + MP
Sbjct: 417 KKVFQRMP 424
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MYSK G + A+ +FDRM E N S N M++GY + G +EA+ F + I P+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S+++AC + +A+ F G + + + G +++A+++ M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 498 PFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
P N V + L Y+ +G +EV + MR G+
Sbjct: 121 P------------------DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGI 156
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 369/672 (54%), Gaps = 41/672 (6%)
Query: 43 LYSKCGCLSAA------HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
L+ CG L A H+ + ++N F N +L Y SA + FD+I DL
Sbjct: 98 LFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDL 157
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCL 154
S++T+ISAY + G + A+ LF M + + S LI + ++ L L KQ+H
Sbjct: 158 SSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQ 217
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
I GF S+ + Y + G+LD A+ +M K+ V+ ++V Y + +
Sbjct: 218 LIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTR-KNAVACTGLMVGYTKAARNRD 276
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL LF +M+S + LD + + IL A +L DL G Q H++ IK G +G+ L+D
Sbjct: 277 ALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 336
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
Y KC+ + FE I +P+ W+ +I+GY Q ++ D+AL FK + G +
Sbjct: 337 FYVKCA-RFEAARQAFESIHEPNDFSWSALIAGYCQSGQF-DRALEVFKAIRSKGVLLNS 394
Query: 335 CSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ + ACS +S + G QIHA IK + + +S +A+++MYSKCG ++ A + F
Sbjct: 395 FIYTNIFQACSAVSDLICGAQIHADAIKKGLVA-YLSGESAMISMYSKCGQVDYAHQAFL 453
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+ + +TV+ ++I +A HG EALRLF+ M + + P +TF+ +L+AC+H+G V E
Sbjct: 454 TIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKE 513
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK------ 507
G+K M D +G P +HY+CMID+ RAG L +A +I ++PF P ++ K
Sbjct: 514 GKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573
Query: 508 -----------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
AA++ +L+P ++ YV++ N+YA +GKW+E A R++M +R ++K+
Sbjct: 574 WSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVS 633
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-----------VPDKEKR 605
SWI VK ++H FV D HP ++I++ L+E++ K++ +++++
Sbjct: 634 CSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENALCDFTERKEQ 693
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
L+ HSE+LA+A+GL+ T+ PI+V KN R C DCH+ K +S + GRE+ VRD RFH
Sbjct: 694 LLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHH 753
Query: 666 FKDGRCSCGDYW 677
G CSC DYW
Sbjct: 754 INSGECSCRDYW 765
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 59/322 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +LK C DL TGK +H+ +K + + + Y KC AA AF
Sbjct: 295 VFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESI 354
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N FS++ L+A Y + G + AL +FK
Sbjct: 355 HEPNDFSWSALIAGYCQS-------------------------------GQFDRALEVFK 383
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R K + F + + A S ++L Q+H AI G Y S +++++ YS+ G
Sbjct: 384 AIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCG 443
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A + F + + D V+W +++ A+ H + EAL+LF+EM + + T +L
Sbjct: 444 QVDYAHQAFLTIDK-PDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLL 502
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG----------FHQNSHIG--SGLIDLYAKCSGDMRDC 286
A + H+ L+K G + N I + +ID+Y++ +G +++
Sbjct: 503 NACS-----------HSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSR-AGLLQEA 550
Query: 287 MKVFEEIP-QPDLVLWNTMISG 307
++V +P +PD++ W +++ G
Sbjct: 551 LEVIRSLPFEPDVMSWKSLLGG 572
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/653 (36%), Positives = 361/653 (55%), Gaps = 52/653 (7%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F+Q N SFN +++ Y + +A AR++FD +P+ ++VS+ +++ Y G E A
Sbjct: 75 FDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAE 134
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
LF +M + + + GL+ S + K+L + + V +++ Y +
Sbjct: 135 KLFWEMPRRNVVSWTVMIGGLLKESRIDDA--KKLFDMIP----EKDVVVVTNMIGGYCQ 188
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G LDEA+ +F EM ++++ +W +MV Y ++ A +LF+ M + + +
Sbjct: 189 VGRLDEARELFDEM-KVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTA 243
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+L +T + + F A +K N I L +G+M +FE + +
Sbjct: 244 MLMGYTQSGRMKEAFELFEAMPVKWIVACNEMI------LQFGLAGEMHRARMMFEGMKE 297
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
D WN MI + +K +ALG F ++ R G + S + V+S C++L S G+Q
Sbjct: 298 RDEGTWNAMIKVFERKG-LDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQ 356
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA ++ E + + V + L+ MY KCG+L A+ +F+R + V NSMI GY+QHG
Sbjct: 357 VHARLVRSEFDQD-LYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHG 415
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+G EAL +F M + + P +TF+ VLSAC+++GKV EG + F MK + EP EHY
Sbjct: 416 LGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHY 475
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----ANH------------FLQLEP 517
+CM+DLLGRAG++ +A L+E MP P +I A NH +LEP
Sbjct: 476 ACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEP 535
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SH 576
NA PYV+L+++YA G+W +V +R+ + +R V K PG SWIEV+K++H+F D SH
Sbjct: 536 KNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRRVIKFPGCSWIEVEKKVHMFTGGDSKSH 594
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P I LE++S +++AGY PD K L +HSE+LAVA+GLL
Sbjct: 595 PEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPE 654
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI VMKNLR+CGDCH+AIK I+ + GREI +RD RFH FKDG CSC D+W
Sbjct: 655 GMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 196/415 (47%), Gaps = 37/415 (8%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
+N+V +++ + Y + G + A F + NV S+ V++ ++ RI A++
Sbjct: 112 RNVVSWTSMVRG-----YVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKK 166
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT-----DGFTLSGLITAS 141
LFD IP+ D+V +I Y G + A LF +M+ + T G+ +G + +
Sbjct: 167 LFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVA 226
Query: 142 SNNLCLI---KQLHCLAIYCGFDHYASVN-----------------NSLLTCYSRNGFLD 181
++ ++ A+ G+ + N ++ + G +
Sbjct: 227 RKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMH 286
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+ +F M E +DE +WN+M+ + + LEAL LF M + L+ ++ S+L+
Sbjct: 287 RARMMFEGMKE-RDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVC 345
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
SL L G Q HA L++S F Q+ ++ S LI +Y KC GD+ +F D+V+W
Sbjct: 346 ASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKC-GDLVRAKGIFNRFLFKDVVMW 404
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQI-HALT 359
N+MI+GYSQ ++AL F + G PD+ +F+ V+SACS + G +I A+
Sbjct: 405 NSMITGYSQ-HGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
++ I +V + + G +++A L ++MP E + + +++ H
Sbjct: 464 CTYQVEPG-IEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNH 517
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 169/393 (43%), Gaps = 70/393 (17%)
Query: 72 LAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
++ Y R I +AR++FD P P + S+N ++SAY + AL LF M ++ +T
Sbjct: 26 ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR--NT 83
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
F N +++ Y +NG + +A++VF
Sbjct: 84 VSF-----------------------------------NGMISGYVKNGMVADARKVFDV 108
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M E ++ VSW SMV Y Q EA +LF EM + S ++G
Sbjct: 109 MPE-RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNV--------------VSWTVMIG 153
Query: 250 GLQFHAHL--IKSGF----HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
GL + + K F ++ + + +I Y + G + + ++F+E+ ++ W T
Sbjct: 154 GLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQV-GRLDEARELFDEMKVRNVFTWTT 212
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIE 363
M+SGY++ + + +KL V ++ S+ ++ + G+ A +
Sbjct: 213 MVSGYAK-----NGRVDVARKLFEVMPERNEVSWTAMLMGYTQ----SGRMKEAFELFEA 263
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ I N ++ + G + AR +F+ M E + + N+MI + + G+ +EAL LF
Sbjct: 264 MPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLF 323
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
M + + +SVLS CA + G++
Sbjct: 324 ARMQREGVALNFPSMISVLSVCASLASLDHGRQ 356
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 335 CSFVCVISACSNLSP-----SLGKQIHALTI--KIEIRSNRISVNNALVAMYSKCGNLED 387
C V S CSN S +G +A + + I+ NA+V+ Y + D
Sbjct: 11 CRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRD 70
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A LFD+MP+ NTVS N MI+GY ++G+ +A ++F+ M E N+ +++ S++
Sbjct: 71 ALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNV----VSWTSMVRGYVQ 126
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL- 506
G V E +K F M ++ MI L + ++ DA++L + +P +
Sbjct: 127 EGMVEEAEKLFWEMP-----RRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTN 181
Query: 507 ------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A F +++ N + + + YA +G+ + + +M +R
Sbjct: 182 MIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER 236
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 42/212 (19%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L G+ +HA +++ Y+++ I +Y KCG L A FN
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFN------ 394
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
R LF D+V +N++I+ Y+ G E AL++F DM
Sbjct: 395 --------------------RFLFK-----DVVMWNSMITGYSQHGLGEEALNVFHDMCS 429
Query: 125 KRFDTDGFTLSGLITASS------NNLCLIKQLHCL-AIYCGFDHYASVNNSLLTCYSRN 177
D T G+++A S + + + C + G +HYA + + L R
Sbjct: 430 SGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLL----GRA 485
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
G +DEA + +M D + W +++ A H
Sbjct: 486 GRVDEAMELVEKMPMEPDAIVWGALLGACRNH 517
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/640 (37%), Positives = 342/640 (53%), Gaps = 44/640 (6%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y++ SAR + P ++VS+ +LIS A G +AL F +MR + + FT
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 135 SGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
A ++ + KQ+H LA+ CG V S Y + D+A+++F E+ E
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 121
Query: 193 IKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
E +WN+ + V G+ RE +EA F E + + T + L A + L
Sbjct: 122 RNLE-TWNAFISNSVTDGRPREAIEA---FIEFRRIDGHPNSITFCAFLNACSDWLHLNL 177
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G+Q H +++SGF + + +GLID Y KC +R +F E+ + V W ++++ Y
Sbjct: 178 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK-QIRSSEIIFTEMGTKNAVSWCSLVAAYV 236
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
Q E ++A + + + D V+SAC+ ++ LG+ IHA +K +
Sbjct: 237 QNHE-DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT- 294
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
I V +ALV MY KCG +ED+ + FD MPE N V+ NS+I GYA G AL LFE M
Sbjct: 295 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 354
Query: 429 TNIPPTN--ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
PT +TFVS+LSAC+ G V G K F M+ +G EP EHYSC++D+LGRAG
Sbjct: 355 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 414
Query: 487 LTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANI 529
+ A I+ MP P + L AA + +L+P ++ +V+L+N
Sbjct: 415 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNT 474
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
+AA+G+W E T+R ++ G++K G+SWI VK Q+H F A+D SH + KEI L ++
Sbjct: 475 FAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 534
Query: 590 SRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
+M+ AGY PD K + HHSEKLA+AFGLLS PI + KNLRIC
Sbjct: 535 RNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRIC 594
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH+ KF+S REI VRD RFH FKDG CSC DYW
Sbjct: 595 GDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C G L G+S+HA +K V + ++ + + +Y KCGC+ + AF++ N
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI------PQPDLVSYNTLISAYADCGDTESALSL 118
+ + N L+ YA Q ++ A LF+++ P P+ +++ +L+SA + G E+ + +
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385
Query: 119 FKDMR 123
F MR
Sbjct: 386 FDSMR 390
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 156/371 (42%), Gaps = 45/371 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L G LH L L++ + N I Y KC
Sbjct: 161 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC------------- 207
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+Q+R S+ +F ++ + VS+ +L++AY + E A L+
Sbjct: 208 ----------------KQIR--SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 249
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R+ +T F +S +++A + L L + +H A+ + V ++L+ Y + G
Sbjct: 250 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 309
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG--LDMYTLAS 236
++++++ F EM E K+ V+ NS++ Y + AL LF+EM G + T S
Sbjct: 310 CIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 368
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G++ F + G + S ++D+ + +G + + +++P
Sbjct: 369 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR-AGMVERAYEFIKKMPI 427
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
QP + +W + + + LG N P D ++ SN + G+
Sbjct: 428 QPTISVWGALQNACRM---HGKPQLGLLAAENLFKLDPKDSGNHVLL---SNTFAAAGRW 481
Query: 355 IHALTIKIEIR 365
A T++ E++
Sbjct: 482 AEANTVREELK 492
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MYSK + E AR + P N VS S+I+G AQ+G AL F M + P + T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 438 FVSVLSACA 446
F A A
Sbjct: 61 FPCAFKAVA 69
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 362/708 (51%), Gaps = 108/708 (15%)
Query: 71 LLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDM-REKRF 127
L+AA A R+ A FD +P + D V +N ++SA+A A+S+F +
Sbjct: 98 LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157
Query: 128 DTDGFTLSGLITASS--NNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCY--------- 174
D ++ + LI+A +NL QLHC + G SV+N+L+ Y
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217
Query: 175 -------------------------SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
R G ++ A+ VF E+ + K +V WN+M+ Y Q
Sbjct: 218 WDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEV-DGKFDVVWNAMISGYVQS 276
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK--SGFHQNSH 267
+A +LF+ MVS ++ LD +T S+L+A + V G H +I+ F +
Sbjct: 277 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 336
Query: 268 --IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE------------- 312
+ + L+ LY+K G + ++F+ + D+V WNT++SGY
Sbjct: 337 LPVNNALVTLYSK-GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395
Query: 313 -----------------EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
S+ AL F ++ P D ++ I+AC L G+Q
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA ++ ++ S NAL+ MY+KCG + DAR +F MP ++VS N+MI+ QHG
Sbjct: 456 LHAHLVQCGFEASN-SAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 514
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G EAL LF+ M+ I P I+F+++L+AC H G V EG YF MK FG P +HY
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP 517
+ +IDLLGR+G++ +A LI+ MPF P AA+ ++ P
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ Y++L+N Y+A+G+W + A +R+LMRDRGV+K+PG SWIEV ++HVF+ D HP
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+E++ +LE + +M++ GYVPD KE L HSEKLAV FGLL G
Sbjct: 695 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 754
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
+ V+KNLRICGDCH A+ F+S GREI VRD RFH FKDG CSC
Sbjct: 755 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 161/327 (49%), Gaps = 34/327 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK---NLVPFSAY-LSNHFILLYSKCGCLSAAHHA 56
TF VL C V GKS+H ++ N VP +A ++N + LYSK G + A
Sbjct: 300 TFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRI 359
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F+ +V S+N +L+ Y + A ++F +P + +S+ ++S Y G +E AL
Sbjct: 360 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 419
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCY 174
LF MR + +T +G I A L +QLH + CGF+ S N+LLT Y
Sbjct: 420 KLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMY 479
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G +++A+ VF M + D VSWN+M+ A GQH G EAL+LF +MV+ + D +
Sbjct: 480 AKCGAVNDARLVFLVMPNL-DSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF 538
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFH------QNSHIGSG------LIDLYAKCS-- 280
+ILTA HA L+ GFH ++ I G LIDL +
Sbjct: 539 LTILTACN-----------HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 587
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISG 307
G+ RD +K P P +W ++SG
Sbjct: 588 GEARDLIKTMPFEPTPS--IWEAILSG 612
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 220/485 (45%), Gaps = 46/485 (9%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSA---AHHAFNQTQHANVFSFNVLLAAYAR 77
LH LK+ +SN I LY KC A A ++ + ++ ++ Y R
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
+ + +AR +F+++ V +N +IS Y G A LF+ M ++ D FT + +
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304
Query: 138 ITASSNNLCLI--KQLH--CLAIYCGFDHYAS--VNNSLLTCYSRNGFLDEAKRVFYEMG 191
++A +N + K +H + + F A+ VNN+L+T YS+ G + AKR+F M
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM- 363
Query: 192 EIKDEVSWNS-----------------------------MVVAYGQHREGL--EALQLFQ 220
+KD VSWN+ MV+ G GL +AL+LF
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
+M + + YT A + A L L G Q HAHL++ GF ++ G+ L+ +YAKC
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC- 482
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
G + D VF +P D V WN MIS Q + +AL F ++ G PD SF+ +
Sbjct: 483 GAVNDARLVFLVMPNLDSVSWNAMISALGQ-HGHGREALELFDQMVAEGIDPDRISFLTI 541
Query: 341 ISACSNLSPSLGKQIHAL-TIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMPEH 398
++AC N + + + H ++K + + + A L+ + + G + +AR L MP
Sbjct: 542 LTAC-NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 600
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
T S+ I + ME L IP + T++ + + + G+ + +
Sbjct: 601 PTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVR 660
Query: 459 SMMKD 463
+M+D
Sbjct: 661 KLMRD 665
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/666 (34%), Positives = 356/666 (53%), Gaps = 77/666 (11%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ A LFD+IP+PDL ++ LIS + G + A+ ++ + + D F L + A
Sbjct: 27 LKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKA 86
Query: 141 --SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
+S +L + K++H AI GF+ + N+L+ + + F++ A+ VF +M +KD VS
Sbjct: 87 CAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDM-VVKDVVS 145
Query: 199 WNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
W SM Y G R+G+ LF+EM + + T++SIL A L G + H
Sbjct: 146 WTSMTYCYVNCGMCRQGI---LLFREMGLNGIRANSLTVSSILPACADYIKL--GREVHG 200
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
++++ N ++ S L+++YA G ++ VF+ + D+V WN M++ Y +EY
Sbjct: 201 FILRNEMEGNVYVSSALVNMYASSLG-LKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYE 259
Query: 316 ----------------------------------DQALGCFKKLNRVGYHPDDCSFVCVI 341
+ ALG K+ G P+ + V +
Sbjct: 260 RGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSAL 319
Query: 342 SACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
C+NL S GK+IH + + +++ ALV +Y+KCG+LE +R +F+ MP +
Sbjct: 320 PGCTNLESLRGGKEIHGYVFRHWFIED-VTITTALVLLYAKCGDLELSRHVFNTMPRKDV 378
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
V+ N+MI + HG G E+L LF ML++ + P ++TF+ VLS C+H+ EG F+
Sbjct: 379 VAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNS 438
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------S 503
M P+ +HYSCM+D+L RAG+L +A I MP P
Sbjct: 439 MSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVE 498
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+ AA+ ++EP NA YV+L+NI + KW E + IR++MRD+G+ K PG SW++VK
Sbjct: 499 LGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVK 558
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSE 611
+++ FV D S+ I+ +L+E+ KM+ GY P D+E+R L HSE
Sbjct: 559 NKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSE 618
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
+LAVAFG+L++S + V KNLRICGDCHNAIK I+ I G +I VRD+ RFH F+DG C
Sbjct: 619 RLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYC 678
Query: 672 SCGDYW 677
+C D+W
Sbjct: 679 TCNDFW 684
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 273 IDLYAKC--SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
I L C SGD++ + +F++IP+PDL W +ISG++Q + +A+ + L
Sbjct: 15 IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQ-HGFPKKAIDIYSTLLSRNV 73
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PD + V AC+ + K+IH I+ + + + NAL+ M+ KC + AR
Sbjct: 74 RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLV-LGNALIDMFGKCKFVNGAR 132
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+FD M + VS SM Y G+ + + LF M I ++T S+L ACA
Sbjct: 133 CVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--- 189
Query: 450 KVAEGQKYFSMMKDMFGF----EPEGEHY--SCMIDLLGRAGKLTDAERLIEAM 497
Y + +++ GF E EG Y S ++++ + L A + ++M
Sbjct: 190 ------DYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM 237
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L G+ +H L+N + + Y+S+ + +Y+ L A F+
Sbjct: 180 TVSSILPACADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM 237
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
H ++ S+NV+L AY LF Q+ + + S+N IS G E AL
Sbjct: 238 YHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELAL 297
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ M++ + T+ + +N +L K++H F ++ +L+ Y
Sbjct: 298 GILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLY 357
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G L+ ++ VF M KD V+WN+M++A H +G E+L LF +M+ + + T
Sbjct: 358 AKCGDLELSRHVFNTMPR-KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTF 416
Query: 235 ASILTA 240
+L+
Sbjct: 417 IGVLSG 422
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 42/197 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C L GK +H ++ ++ +LLY+KCG L + H FN
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFN-- 371
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P+ D+V++NT+I A + G +L LF
Sbjct: 372 -----------------------------TMPRKDVVAWNTMIMANSMHGKGGESLILFN 402
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M + + + T G+++ S++ + L +I DHY+ + + L
Sbjct: 403 KMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVL--- 459
Query: 174 YSRNGFLDEAKRVFYEM 190
SR G L+EA +M
Sbjct: 460 -SRAGRLEEAYDFIRKM 475
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/625 (36%), Positives = 330/625 (52%), Gaps = 98/625 (15%)
Query: 149 KQLHCLAI-----------------YCGFDHYASVNN--------------SLLTCYSRN 177
KQ+HC A+ Y FDH N +L++ ++R
Sbjct: 94 KQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARK 153
Query: 178 GFLDEAKRVFYEMGEIKDE---VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
G + E K +FY+ ++ E VSWN M+ + + L+A+ +FQ M L D ++
Sbjct: 154 GRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSV 213
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-------------- 280
+S+L A L+ + G+Q H ++IK G + + S LID+Y KC+
Sbjct: 214 SSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDE 273
Query: 281 ----------------GDMRDCMKVFEEIPQPDL--VLWNTMISGYSQKEEYSDQALGCF 322
G + + ++VF++ DL V W +MI+ SQ + +AL F
Sbjct: 274 VDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGK-DMEALELF 332
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSK 381
+++ G P+ + C++ AC N++ L GK H +++ I N + V +AL+ MY+K
Sbjct: 333 REMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGI-FNDVYVGSALIDMYAK 391
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG + +R FD MP N VS NS++AGYA HG EA+ +FE M P +++F V
Sbjct: 392 CGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCV 451
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
LSAC G EG YF M G E EHYSCM+ LLGR+G+L +A +I+ MPF P
Sbjct: 452 LSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEP 511
Query: 502 GS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
S + AA +LEP N Y++L+NIYA+ W EV +R
Sbjct: 512 DSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRD 571
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---- 600
+MR RG++K PG+SWIE+K ++H+ +A D SHP + +I L +++ +MK++GYVP
Sbjct: 572 MMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDF 631
Query: 601 --------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
DKE+ L HSEKLAV GLL+T G P+ V+KNLRIC DCH IKFIS
Sbjct: 632 VLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEK 691
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
REI VRDT RFH FK G CSCGDYW
Sbjct: 692 REIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L+ GK+ H L+N + Y+ + I +Y+KCG + A+ F+
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMM 405
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ N+ S+N L+A YA + A +F+ + +PD VS+ ++SA G TE
Sbjct: 406 PNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGW 465
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + +HY+ ++T R
Sbjct: 466 FYFDSMSRNH----------------------------GVEARMEHYS----CMVTLLGR 493
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+G L+EA + +M D W +++
Sbjct: 494 SGRLEEAYAMIKQMPFEPDSCVWGALL 520
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/657 (36%), Positives = 352/657 (53%), Gaps = 70/657 (10%)
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--N 143
+LF+ I P +++ ++I Y G +L F M D ++ + +
Sbjct: 61 RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR-------VFYEMGEI--- 193
+L L + LH I G D N+L+ YS+ FL+E+ R VF EM E
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 194 ---------------------KDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLD 230
KD VSWN+++ G R GL E L++ +EM L D
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIA--GNARNGLYEETLRMIREMGGANLKPD 238
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+TL+S+L D+ G + H I+ G + ++ S LID+YAKC+ + D +VF
Sbjct: 239 SFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT-RVADSCRVF 297
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ + D + WN++I+G Q + D+ L F+++ P SF ++ AC++L+
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLF-DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTL 356
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LGKQ+H + N I + ++LV MY+KCGN+ A+++FDRM + VS +MI G
Sbjct: 357 HLGKQLHGYITRNGFDEN-IFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
A HG +A+ LFE M I P ++ F++VL+AC+H G V E KYF+ M FG P
Sbjct: 416 CALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAP 475
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHF 512
EHY+ + DLLGRAG+L +A I M P GSI A K AN
Sbjct: 476 GVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRI 535
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+++P+N Y++LANIY+A+ +W+E A R MR G++K P SWIEVK +++ F+A
Sbjct: 536 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAG 595
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD-----------KEKRLV-HHSEKLAVAFGLL 620
D SHP ++I +E + M++ GYVPD ++K LV HSE+LA+ FG++
Sbjct: 596 DESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII 655
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+T G I V KNLR+C DCH A KFIS I GREI VRD RFH FK+G CSCGDYW
Sbjct: 656 NTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 175/356 (49%), Gaps = 36/356 (10%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YS L ++ R+F + ++W S++ Y H ++L F M++ L D
Sbjct: 50 YSHINLLHDSLRLFNTI-HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC------------SG 281
S+L + L DL G H ++I+ G + + G+ L+++Y+K +G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 282 DMRDCM-------------------KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
++ D M K+FE +P+ DLV WNT+I+G ++ Y ++ L
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLY-EETLRMI 227
Query: 323 KKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
+++ PD + V+ + N+ S GK+IH +I+ + ++ I V ++L+ MY+K
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDAD-IYVASSLIDMYAK 286
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
C + D+ R+F + E + +S NS+IAG Q+G+ E LR F ML I P + +F S+
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ACAH + G++ + GF+ S ++D+ + G + A+++ + M
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F ++ C L GK LH +N + ++++ + +Y+KCG + A F++
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ ++ S+ ++ A + A +LF+Q+ +P+ V++ +++A + G + A
Sbjct: 402 RLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAW 461
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M I G +HYA+V++ L R
Sbjct: 462 KYFNSMTRD----------------------------FGIAPGVEHYAAVSDLL----GR 489
Query: 177 NGFLDEA 183
G L+EA
Sbjct: 490 AGRLEEA 496
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
S S +Q+HA +K + ++ + + L+++YS L D+ RLF+ + ++ S+I
Sbjct: 21 SRSQAQQLHAQVLKFQ--ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVI 78
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
Y HG+ ++L F ML + + P + F SVL +CA
Sbjct: 79 RCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 355/645 (55%), Gaps = 65/645 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A + + + ++ S+N++I+ A GD+ AL F +R+ GLI S+
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRK----------LGLIPTRSS 2017
Query: 144 NLCLIKQLHCL------------AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
C IK L A GF+ V+++L+ YS+ G L +A+ +F E+
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI- 2076
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ--------LGLDMYTLASILTAFTS 243
+++ VSW SM+ Y Q+ + AL LF++ + + + LD + S+L+A +
Sbjct: 2077 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 2136
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+ H ++K GF + +G+ L+D YAKC G KVF+ + + D + WN+
Sbjct: 2137 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKC-GQPLVSKKVFDWMEEKDDISWNS 2195
Query: 304 MISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
MI+ Y+Q S +AL F + R VG + + V+ AC++ GK IH IK
Sbjct: 2196 MIAVYAQ-SGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 2254
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+++ N + V +++ MY KCG +E A++ FDRM E N S +M+AGY HG EAL
Sbjct: 2255 MDLEYN-VCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALD 2313
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+F M+ + P ITFVSVL+AC+H G V EG +F+ MK + EP EHY CM+DL
Sbjct: 2314 IFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLF 2373
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYV 524
GRAG L +A LI+ M P + AA +L+P N YV
Sbjct: 2374 GRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYV 2433
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N+YA +G+W +V +R LM++R + K PGFS +E+K ++HVF+ D HP + I+
Sbjct: 2434 LLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYK 2493
Query: 585 YLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
YLE+++ ++++ GYVP +KE L HSEKLAVAFG+++++ G I ++K
Sbjct: 2494 YLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIK 2553
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+CGDCH IK IS + R+ VRD+ RFH FKDG CSCGDYW
Sbjct: 2554 NLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 190/380 (50%), Gaps = 38/380 (10%)
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
N ++Q+H I G + + L+ YS +G + A +FY++ + +WN ++
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-QNPCTFTWNLII 97
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
A + +AL L++ MV + D +T ++ A T+ + G H LIK GF
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 264 QNSHIGSGLIDLYAKCS------------------------------GDMRDCMKVFEEI 293
+ + + LID Y KC GD+++ ++F+EI
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
P ++V W MI+GY + ++ ++AL FK++ P++ + V +I AC+ + +LG
Sbjct: 218 PSKNVVSWTAMINGYIRNQQ-PEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 353 KQIHALTIK--IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+ IH IK IEI + + AL+ MYSKCG+++DA +F+ MP + + NSMI
Sbjct: 277 RGIHDYAIKNCIEIG---VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSL 333
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
HG+G EAL LF M N+ P ITF+ VL AC H V EG YF+ M +G P
Sbjct: 334 GVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPI 393
Query: 471 GEHYSCMIDLLGRAGKLTDA 490
EHY CM +L R+ L +A
Sbjct: 394 PEHYECMTELYARSNNLDEA 413
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 36/310 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y+ RIA A LF QI P ++N +I A G +E AL L+K+M + D
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 131 GFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCY-------------- 174
FT +I A +N L L K +H I GF V N+L+ Y
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 175 ---SRN--------------GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
RN G L EA+R+F E+ K+ VSW +M+ Y ++++ EAL+
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS-KNVVSWTAMINGYIRNQQPEEALE 243
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF+ M + + + YT+ S++ A T + L G H + IK+ ++G+ LID+Y+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC G ++D ++VFE +P+ L WN+MI+ +AL F ++ RV PD +F
Sbjct: 304 KC-GSIKDAIEVFETMPRKSLPTWNSMITSLGV-HGLGQEALNLFSEMERVNVKPDAITF 361
Query: 338 VCVISACSNL 347
+ V+ AC ++
Sbjct: 362 IGVLCACVHI 371
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 5/296 (1%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C + GK +H +K ++ N+ I Y KCG A F +
Sbjct: 127 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV S+ +++ + AR++FD+IP ++VS+ +I+ Y E AL LFK
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 246
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + + +T+ LI A + L L + +H AI + + +L+ YS+ G
Sbjct: 247 RMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCG 306
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A VF M K +WNSM+ + G H G EAL LF EM + + D T +L
Sbjct: 307 SIKDAIEVFETMPR-KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
A ++++ G + + + G + +LYA+ S ++ + K +E+
Sbjct: 366 CACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYAR-SNNLDEAFKSTKEV 420
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HA +I+SG + + LI LY+ G + + +F +I P WN +I +
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYS-THGRIAYAILLFYQIQNPCTFTWNLIIRA-NTI 102
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRIS 370
S+QAL +K + G D +F VI AC+N LS LGK +H IK S +
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF-SGDVF 161
Query: 371 VNNALVAMYSKCG-------------------------------NLEDARRLFDRMPEHN 399
V N L+ Y KCG +L++ARR+FD +P N
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
VS +MI GY ++ EAL LF+ M NI P T VS++ AC G + G+
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 460 -MMKDMFGFEPEGEHY-SCMIDLLGRAGKLTDAERLIEAMP 498
+K+ G + + +ID+ + G + DA + E MP
Sbjct: 282 YAIKNCIEI---GVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H +K + ++ + I +Y KCG + A F++
Sbjct: 2228 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++A Y R A +F ++ +P+ +++ ++++A + G E
Sbjct: 2288 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 2347
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+ H I G +HY ++ + R
Sbjct: 2348 HWFNAMK----------------------------HKYDIEPGIEHYG----CMVDLFGR 2375
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G L+EA + M D V W S++ A H+
Sbjct: 2376 AGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHK 2409
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/706 (33%), Positives = 377/706 (53%), Gaps = 68/706 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G +LV G+ +H ++ + N I +Y KCG
Sbjct: 209 TFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCG------------ 256
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +AR +FD++P D +S+N +IS Y + G L LF
Sbjct: 257 -------------------DVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFG 297
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + D D T++ +ITA + L +Q+H + F S++NSL+ YS G
Sbjct: 298 MMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVG 357
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA+ VF E +D VSW +M+ Y +AL+ ++ M + + D T+A +L
Sbjct: 358 LIEEAETVFSRT-ECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVL 416
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + L +L G+ H + G S + + LID+YAKC + +++F + ++
Sbjct: 417 SACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKC-IDKALEIFHSTLEKNI 475
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W ++I G + +AL F+++ R P+ + VCV+SAC+ + + GK+IHA
Sbjct: 476 VSWTSIILGL-RINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHA 533
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NA++ MY +CG +E A + F + +H S N ++ GYA+ G G
Sbjct: 534 HALRTGVSFDGF-MPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGA 591
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A LF+ M+E+N+ P +TF+S+L AC+ +G VAEG +YF+ MK + P +HY+C+
Sbjct: 592 HATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACV 651
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGR+GKL +A I+ MP P + AA + Q + ++
Sbjct: 652 VDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSV 711
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L+N+YA +GKW++VA +R++MR G+ PG SW+EVK +H F++ D HP IK
Sbjct: 712 GYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIK 771
Query: 581 EIHNYLEEMSRKMKQAGYV-PD----------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ LE +KMK+AG P+ K HSE+LA+ FGL+++ G PI
Sbjct: 772 EINALLERFYKKMKEAGVEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIW 831
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KNL +C CHN +KFIS REI+VRD +FH FK G CSC D
Sbjct: 832 VTKNLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 5/282 (1%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ N+LL+ + R G L +A VF M E ++ SWN +V Y + EAL L+ M+ +
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRM-EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWV 201
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ D+YT +L + +LV G + H H+I+ GF + + + LI +Y KC GD+
Sbjct: 202 GVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKC-GDVNT 260
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF+++P D + WN MISGY + + L F + + PD + VI+AC
Sbjct: 261 ARLVFDKMPNRDRISWNAMISGYFEN-GVCLEGLRLFGMMIKYPVDPDLMTMTSVITACE 319
Query: 346 NLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L LG+QIH ++ E + S++N+L+ MYS G +E+A +F R + VS
Sbjct: 320 LLGDDRLGRQIHGYVLRTEFGRDP-SIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWT 378
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+MI+GY + +AL ++ M I P IT VLSAC+
Sbjct: 379 AMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACS 420
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNA 374
D+A+ ++ + +D ++V +I C + G ++++ + I + + + NA
Sbjct: 88 DRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSY-VSISMSHLSLQLGNA 146
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++M+ + GNL DA +F RM + N S N ++ GYA+ G+ EAL L+ ML + P
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
TF VL C + G++ + +GFE + + + +I + + G + A +
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGRE-IHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVF 265
Query: 495 EAMP 498
+ MP
Sbjct: 266 DKMP 269
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/717 (32%), Positives = 380/717 (52%), Gaps = 76/717 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C DL TGK++HA+ + + + +LSN +Y+ CG
Sbjct: 105 TYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCG------------ 152
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + D VS+N+L+S Y G E L +F
Sbjct: 153 -------------------EMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFS 193
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + F L +I AS +++ + + +H + G D + ++++ Y++
Sbjct: 194 LMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAK 253
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL------EALQLFQEMVSLQLGLD 230
G L A +F + + + + +N+M+ + + + EAL L+ EM S +
Sbjct: 254 RGALTNAVALFKSVPD-PNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPS 312
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+T +SIL A + G Q H ++K FH + +IGS LIDLY+ SG M D + F
Sbjct: 313 EFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSD-SGCMEDGYRCF 371
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+P+ D+V W +MISG Q E + ++AL F++ G PD + V++AC++L+ +
Sbjct: 372 RSLPKQDIVTWTSMISGCVQNELF-EKALRLFQESICYGLKPDLFTMSSVMNACASLAVA 430
Query: 351 -LGKQIHALTIKIEIRSNRIS-VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G+QI L IK NR + + N+ + M ++ G+++ R F M + VS +++I+
Sbjct: 431 RTGEQIQCLAIKYGF--NRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVIS 488
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
+AQHG +ALR+F M+ + P +TF++VL+AC+H G V +G +Y+ +MK+ +G
Sbjct: 489 SHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLS 548
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANH 511
P +H +C++DLLGRAG+L DAE I F+ ++ ++ A+
Sbjct: 549 PTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQ 608
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
+ LEP+++ YV+L N+Y +G+ + R LM++RGV+K+PG SWIE++ +H FVA
Sbjct: 609 IMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVA 668
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQ----------AGYVPDKEKRLVH-HSEKLAVAFGLL 620
D SHP I+ L EM K+++ + + E+ LV HSEK+AVAFG++
Sbjct: 669 GDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSEQNLVGCHSEKIAVAFGMI 728
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCH+ +K IS REI +RD RFH F+ G CSCGDYW
Sbjct: 729 HLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/463 (30%), Positives = 236/463 (50%), Gaps = 23/463 (4%)
Query: 52 AAHHAFNQTQH--ANVFSFNVLLAAYARQLRIAS---ARQLFDQIPQPDLVSYNTLISAY 106
AA HA H A++F N LLAAY R L + + A +L D++P+ + VSYN LIS+Y
Sbjct: 19 AAVHAHIARAHPTASLFLRNSLLAAYCR-LGVGAPLHAARLIDEMPRRNAVSYNLLISSY 77
Query: 107 ADCGDTESALSLFKDMREKR-FDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHY 163
+ G AL F R D FT + + A S L L K +H + + G +
Sbjct: 78 SRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNG 137
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
++NSL + Y+ G + EA+RVF + E D+VSWNS++ Y + E L++F M
Sbjct: 138 VFLSNSLASMYASCGEMGEARRVF-DAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMC 196
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
LG + + L SI+ S D+ + H ++K+G + + S +ID+YAK G
Sbjct: 197 HHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAK-RG 255
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKE-----EYSDQALGCFKKLNRVGYHPDDCS 336
+ + + +F+ +P P+++++N MI+G+ + E E S +AL + ++ G P + +
Sbjct: 256 ALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFT 315
Query: 337 FVCVISACSNLSP--SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
F ++ AC NL+ GKQIH +K + + +AL+ +YS G +ED R F
Sbjct: 316 FSSILRAC-NLAGEFGFGKQIHGQVLKHSFHDDDY-IGSALIDLYSDSGCMEDGYRCFRS 373
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+P+ + V+ SMI+G Q+ + +ALRLF+ + + P T SV++ACA G
Sbjct: 374 LPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTG 433
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++ + +GF + I + R+G + R + M
Sbjct: 434 EQ-IQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEM 475
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 11/261 (4%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HAH+ ++ + + + L+ Y + G ++ +E+P+ + V +N +IS YS +
Sbjct: 22 HAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYS-RA 80
Query: 313 EYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRIS 370
+AL F + G D ++ ++ACS L GK +HA+T+ ++ N +
Sbjct: 81 GLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTV-LDGLGNGVF 139
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
++N+L +MY+ CG + +ARR+FD EH+ VS NS+++GY + G E L++F M
Sbjct: 140 LSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHG 199
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF---GFEPEGEHYSCMIDLLGRAGKL 487
+ + S++ CA V G+ + G + + S MID+ + G L
Sbjct: 200 LGWNSFALGSIIKCCASGSDV--GRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGAL 257
Query: 488 TDAERLIEAMPFNPGSIALKA 508
T+A L +++P +P I A
Sbjct: 258 TNAVALFKSVP-DPNVIVFNA 277
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/560 (39%), Positives = 335/560 (59%), Gaps = 37/560 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+Q+H I + + L+T Y R G LD+A+ V M E + VSW +M+ Y Q
Sbjct: 62 RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPE-RSVVSWTTMISGYSQ 120
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+EAL LF +M+ + YTLA++LT+ + + + G Q H+ L+K+ F + +
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 180
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+YAK S ++++ +VF+ +P+ D+V +ISGY+QK ++AL F++L
Sbjct: 181 GSSLLDMYAK-SENIQEARRVFDTLPERDVVSCTAIISGYAQKG-LDEEALDLFRQLYSE 238
Query: 329 GYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + +F +++A S L S GKQ+HAL ++ E+ +++ N+L+ MYSKCG L
Sbjct: 239 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL-PFFVALQNSLIDMYSKCGKLLY 297
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+RR+FD M E + VS N+M+ GY +HG+G E + LF+ L + P ++T ++VLS C+H
Sbjct: 298 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSH 356
Query: 448 TGKVAEGQKYF-SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP----- 501
G V EG F +++K+ G HY C+IDLLGR+G+L A LIE MPF
Sbjct: 357 GGLVDEGLDIFDTVVKEQSALLHTG-HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIW 415
Query: 502 ----GSIALKA--------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
G+ + A A L++EP NA YV+L+NIYAA+G W++V +R+LM ++
Sbjct: 416 GSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEK 475
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
V K+PG SWI + K +H F + + HP K+I+ ++E+ +K AG+VPD
Sbjct: 476 TVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDV 535
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KE+ L+ HSEKLA+ FGL++T G I VMKNLRIC DCHN KF+S + REI++
Sbjct: 536 DDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISL 595
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH G C+CGDYW
Sbjct: 596 RDKNRFHLLTHGNCTCGDYW 615
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 187/411 (45%), Gaps = 38/411 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ + C+ RR L G+ +HA + + +L + +Y +CG L A + ++
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+V S+ +++ Y++ R A LF ++ + A C E
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLR-------------AGCIPNE-------- 143
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+TL+ ++T+ S + KQ+H L + F+ + V +SLL Y+++
Sbjct: 144 ----------YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 193
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ EA+RVF + E +D VS +++ Y Q EAL LF+++ S + + T +++T
Sbjct: 194 IQEARRVFDTLPE-RDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVT 252
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + L L G Q HA +++ + + LID+Y+KC G + +VF+ + + +V
Sbjct: 253 ALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKC-GKLLYSRRVFDNMLERSVV 311
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
WN M+ GY + + + FK L++ PD + + V+S CS+ G I
Sbjct: 312 SWNAMLMGYG-RHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDT 369
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+K + ++ + + G LE A L + MP +T S+ + G
Sbjct: 370 VVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 420
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 40/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +C G + + GK +H+L +K N
Sbjct: 145 TLATVLTSCSGPQSIYQGKQVHSLLVKT-----------------------------NFE 175
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +F + LL YA+ I AR++FD +P+ D+VS +IS YA G E AL LF+
Sbjct: 176 SH--MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 233
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + T + L+TA S +L KQ+H L + + ++ NSL+ YS+ G
Sbjct: 234 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 293
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L ++RVF M E + VSWN+M++ YG+H G E + LF+++ ++ D TL ++L
Sbjct: 294 KLLYSRRVFDNMLE-RSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVL 351
Query: 239 TAFTSLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+ + + GL ++K S H G +IDL + SG + + + E +P +
Sbjct: 352 SGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGC-IIDLLGR-SGRLEKALNLIENMPFE 409
Query: 296 PDLVLWNTMI 305
+W +++
Sbjct: 410 STPSIWGSLL 419
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/560 (39%), Positives = 335/560 (59%), Gaps = 37/560 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+Q+H I + + L+T Y R G LD+A+ V M E + VSW +M+ Y Q
Sbjct: 30 RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPE-RSVVSWTTMISGYSQ 88
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+EAL LF +M+ + YTLA++LT+ + + + G Q H+ L+K+ F + +
Sbjct: 89 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 148
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+YAK S ++++ +VF+ +P+ D+V +ISGY+QK ++AL F++L
Sbjct: 149 GSSLLDMYAK-SENIQEARRVFDTLPERDVVSCTAIISGYAQKG-LDEEALDLFRQLYSE 206
Query: 329 GYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + +F +++A S L S GKQ+HAL ++ E+ +++ N+L+ MYSKCG L
Sbjct: 207 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL-PFFVALQNSLIDMYSKCGKLLY 265
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+RR+FD M E + VS N+M+ GY +HG+G E + LF+ L + P ++T ++VLS C+H
Sbjct: 266 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK-DLHKEVKPDSVTLLAVLSGCSH 324
Query: 448 TGKVAEGQKYF-SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP----- 501
G V EG F +++K+ G HY C+IDLLGR+G+L A LIE MPF
Sbjct: 325 GGLVDEGLDIFDTVVKEQSALLHTG-HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIW 383
Query: 502 ----GSIALKA--------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
G+ + A A L++EP NA YV+L+NIYAA+G W++V +R+LM ++
Sbjct: 384 GSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEK 443
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
V K+PG SWI + K +H F + + HP K+I+ ++E+ +K AG+VPD
Sbjct: 444 TVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDV 503
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KE+ L+ HSEKLA+ FGL++T G I VMKNLRIC DCHN KF+S + REI++
Sbjct: 504 DDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISL 563
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH G C+CGDYW
Sbjct: 564 RDKNRFHLLTHGNCTCGDYW 583
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 187/411 (45%), Gaps = 38/411 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ + C+ RR L G+ +HA + + +L + +Y +CG L A + ++
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+V S+ +++ Y++ R A LF ++ + A C E
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLR-------------AGCIPNE-------- 111
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+TL+ ++T+ S + KQ+H L + F+ + V +SLL Y+++
Sbjct: 112 ----------YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 161
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ EA+RVF + E +D VS +++ Y Q EAL LF+++ S + + T +++T
Sbjct: 162 IQEARRVFDTLPE-RDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVT 220
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + L L G Q HA +++ + + LID+Y+KC G + +VF+ + + +V
Sbjct: 221 ALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKC-GKLLYSRRVFDNMLERSVV 279
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
WN M+ GY + + + FK L++ PD + + V+S CS+ G I
Sbjct: 280 SWNAMLMGYG-RHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDT 337
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+K + ++ + + G LE A L + MP +T S+ + G
Sbjct: 338 VVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 388
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 40/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +C G + + GK +H+L +K N
Sbjct: 113 TLATVLTSCSGPQSIYQGKQVHSLLVKT-----------------------------NFE 143
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +F + LL YA+ I AR++FD +P+ D+VS +IS YA G E AL LF+
Sbjct: 144 SH--MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + T + L+TA S +L KQ+H L + + ++ NSL+ YS+ G
Sbjct: 202 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 261
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L ++RVF M E + VSWN+M++ YG+H G E + LF+++ ++ D TL ++L
Sbjct: 262 KLLYSRRVFDNMLE-RSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVL 319
Query: 239 TAFTSLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+ + + GL ++K S H G +IDL + SG + + + E +P +
Sbjct: 320 SGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGC-IIDLLGR-SGRLEKALNLIENMPFE 377
Query: 296 PDLVLWNTMI 305
+W +++
Sbjct: 378 STPSIWGSLL 387
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/632 (35%), Positives = 353/632 (55%), Gaps = 39/632 (6%)
Query: 81 IASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGL 137
++ A +LF P P SYN LI ++ G E AL LF +M + D T++
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 138 ITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ + S +L + + + A GF V NSL+ Y+ G + A +F+ + ++K
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV-QVKG 236
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
++WN+M+ Y ++ + E +++F+ M+ ++ D TL S+ TA L D G
Sbjct: 237 VIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAE 296
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
+ + G ++ ++ + L+D+YAKC G++ ++F+ + D+V W+ MISGY+Q +
Sbjct: 297 YAEEKGMLRSRNLATALVDMYAKC-GELDKARRLFDRMHSRDVVAWSAMISGYTQSDR-C 354
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
+AL F ++ +P+D + V V+SAC+ L GK +H+ + ++ I + A
Sbjct: 355 REALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVI-LGTA 413
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV Y+KCG ++DA + F+ MP NT + ++I G A +G EAL LF MLE NI PT
Sbjct: 414 LVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPT 473
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
++TF+ VL AC+H V EG+++F+ M +G P EHY CM+DLLGRAG + +A + I
Sbjct: 474 DVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFI 533
Query: 495 EAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWE 537
MP P ++ + A + L+P ++ Y++L+N YA+ G+W+
Sbjct: 534 RNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWK 593
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
A +R+ M+++GV+K PG S IE++ + F AED HP + EI+ + EM +K G
Sbjct: 594 NAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVG 653
Query: 598 YVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
Y+P +K+ + HHSEKLA+AFGL+ + G I + KNLR+C DCH+A K
Sbjct: 654 YIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATK 713
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + REI VRD RFH FKDG CSC DYW
Sbjct: 714 LISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 190/429 (44%), Gaps = 43/429 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +K+C DL G+ + A K ++ N I +Y+ CG + AAH F+
Sbjct: 173 TVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV 232
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q V ++N ++A Y + GD + + +FK
Sbjct: 233 QVKGVIAWNAMIAGYVKN-------------------------------GDWKEVVEMFK 261
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E R D TL + TA + L + + A G ++ +L+ Y++ G
Sbjct: 262 GMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCG 321
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A+R+F M +D V+W++M+ Y Q EAL +F EM ++ + T+ S+L
Sbjct: 322 ELDKARRLFDRMHS-RDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVL 380
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G H+++ + +G+ L+D YAKC G ++D +K FE +P +
Sbjct: 381 SACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKC-GCIKDAVKAFESMPVRNT 439
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
W +I G + S +AL F + P D +F+ V+ ACS+ L +
Sbjct: 440 WTWTALIKGMASNGR-SREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFT 498
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG- 414
++T I RI +V + + G +++A + MP E N V ++++ H
Sbjct: 499 SMTQDYGI-CPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKN 557
Query: 415 --IGMEALR 421
IG EAL+
Sbjct: 558 VEIGEEALK 566
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/563 (38%), Positives = 315/563 (55%), Gaps = 33/563 (5%)
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
N+ I+Q+H + G + N LL Y+++ +D+A +F + ++D +W+ MV
Sbjct: 15 NVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL-TMRDSKTWSVMV 73
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ + + F+E++ + D YTL ++ DL G H ++K G
Sbjct: 74 GGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLL 133
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+ + + L+D+YAKC + D ++FE + DLV W MI Y+ Y ++L F
Sbjct: 134 SDHFVCASLVDMYAKCIV-VEDAQRLFERMLSKDLVTWTVMIGAYADCNAY--ESLVLFD 190
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
++ G PD + V V++AC+ L + I S + + A++ MY+KCG
Sbjct: 191 RMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCG 250
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
++E AR +FDRM E N +S ++MIA Y HG G +A+ LF ML I P +TFVS+L
Sbjct: 251 SVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLY 310
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG- 502
AC+H G + EG ++F+ M + P+ +HY+CM+DLLGRAG+L +A RLIEAM
Sbjct: 311 ACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDE 370
Query: 503 ----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+A KAAN L+L+P N YV+L+NIYA +GKWE+VA R +M
Sbjct: 371 RLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMM 430
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
R ++K PG++WIEV + + F D SHP KEI+ L + +K++ AGYVPD
Sbjct: 431 TQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVL 490
Query: 602 -------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
K++ L HSEKLA+AFGL++ GEPI + KNLR+CGDCH K +S+I R
Sbjct: 491 QDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRS 550
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD RFH F DG CSCGDYW
Sbjct: 551 IIVRDANRFHHFNDGTCSCGDYW 573
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 148/311 (47%), Gaps = 38/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V++TC R DL G+ +H + LK+ LS+HF+ C S
Sbjct: 103 TLPFVIRTCRDRTDLQIGRVIHDVVLKH-----GLLSDHFV-------CAS--------- 141
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
L+ YA+ + + A++LF+++ DLV++ +I AYADC ES L LF
Sbjct: 142 ----------LVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYES-LVLFD 190
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHC--LAIYCGFDHYASVNNSLLTCYSRNG 178
MRE+ D + ++ A + + + + GF + +++ Y++ G
Sbjct: 191 RMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCG 250
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+ VF M E K+ +SW++M+ AYG H G +A+ LF M+S + + T S+L
Sbjct: 251 SVESAREVFDRMKE-KNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLL 309
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + + GL+F + + + + ++DL + +G + + +++ E + +
Sbjct: 310 YACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGR-AGRLDEALRLIEAMTVEK 368
Query: 297 DLVLWNTMISG 307
D LW+ ++
Sbjct: 369 DERLWSALLGA 379
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 365/660 (55%), Gaps = 65/660 (9%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
++ A +F+ I +P+L+ +NT+ +A D+ +AL L+ M + ++ L+ +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 141 SSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF----------- 187
+ + LI +Q+H + G+D VN SL++ Y++NG L++A +VF
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 188 -------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
++ +KD VSWN+M+ Y + EAL+L+++M+ +
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
D T+ ++++A + G Q H+ + GF N I + LIDLY+KC G++
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKC-GEVETACG 253
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F+ + + D++ WNT+I G++ Y +AL F+++ R G P+D + + V+ AC++L
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYK-EALLLFQEMLRSGESPNDVTMLSVLPACAHLG 312
Query: 349 P-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+G+ IH + +++ +N S+ +L+ MY+KCG++E A+++FD M + S N+M
Sbjct: 313 AIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 372
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G+A HG A LF M + I P +ITFV +LSAC+H+G + G+ F M +
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------A 509
P+ EHY CMIDLLG G +A+ +I MP P + LKA A
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYA 492
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ +++EP N YV+L+NIYA +G+W++VA IR L+ D+G++K PG S IE+ +H F
Sbjct: 493 QNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEF 552
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ D HP +EI+ LEEM M++ G+VPD KE L HHSEKLA+AF
Sbjct: 553 IIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 612
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST G + ++KNLR+C +CH A K IS I REI RD R H KDG SC DYW
Sbjct: 613 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 358/661 (54%), Gaps = 72/661 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ +P+L+ +NT++ A D S L ++ M + +T L+ A
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 142 SNNLCLIKQLHC--LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------ 187
S +Q+H + + C D YA + SL++ Y+RNG L++A++VF
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYA--HTSLISMYARNGRLEDARKVFDXSSQRDVVSCT 153
Query: 188 ------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ +D VSWN+M+ Y ++ EAL+LF+EM+ +
Sbjct: 154 ALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRP 213
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKS--GFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D TL S+L+A + G + H L+ GF + I + I LY+KC GD+
Sbjct: 214 DEGTLVSVLSACAQSGSIELGREIHT-LVDDHHGFGSSLKIVNAFIGLYSKC-GDVEIAS 271
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+FE + D+V WNT+I GY+ Y +AL F+++ R G P+D + + V+ AC++L
Sbjct: 272 GLFEGLSCKDVVSWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTMLSVLPACAHL 330
Query: 348 SP-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+G+ IH + +++ +N ++ +L+ MY+KCG++E A ++F+ M + S N+
Sbjct: 331 GAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNA 390
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI G+A HG A LF M + I P +IT V +LSAC+H+G + G+ F + +
Sbjct: 391 MIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDY 450
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA------------- 508
P+ EHY CMIDLLG AG +AE +I MP P + LKA
Sbjct: 451 NITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESF 510
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A +++EP N+ YV+L+NIYA +G+WE+VA IR ++ +G++K PG S IE+ +H
Sbjct: 511 AQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHE 570
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+A
Sbjct: 571 FIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 630
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL+ST G + V+KNLR+C +CH A K IS I REI RD RFH F+DG CSC DY
Sbjct: 631 FGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDY 690
Query: 677 W 677
W
Sbjct: 691 W 691
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 36/278 (12%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HA ++K+G H ++ S L++L + + VFE +P+L++WNTM+ G +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+ L + ++ G+ P+ +F ++ +C+ G+QIHA +K+ +R +
Sbjct: 62 SDLV-SPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 371 VNNALVAMYSKCGNLED-------------------------------ARRLFDRMPEHN 399
+ +L++MY++ G LED AR++FD + E +
Sbjct: 121 -HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
VS N+MI GY ++ EAL LF+ M+ TN+ P T VSVLSACA +G + G++ +
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++ D GF + + I L + G + A L E +
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGL 277
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/540 (39%), Positives = 312/540 (57%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L Y +NG L A+++F EM E ++ +WN+MV E+L F +M +
Sbjct: 173 NILFGGYIKNGDLGGARKLFDEMPE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM 231
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D + L S+ L D+V G Q HA++++SG ++ +GS L +Y +C G +++
Sbjct: 232 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC-GCLQEGE 290
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
V +P +V NT+I+G +Q + S+ AL F + VG D +FV IS+CS+L
Sbjct: 291 AVLRMLPSLSIVSCNTIIAGRTQNGD-SEGALEYFCMMRSVGVAADVVTFVSAISSCSDL 349
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + G+QIH +K + + V LV MYS+CG L D+ R+F +T L++M
Sbjct: 350 AALAQGQQIHGQVMKAGV-DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 408
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ Y HG G +A+ LF+ M+ P+++TF+++L AC+H+G EG F +M +G
Sbjct: 409 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 468
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAA 509
+P +HY+C++DLLGR+G L +AE LI +MP P + A + A
Sbjct: 469 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIA 528
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++L+P ++ YV+L+NI A S +W +V+ +R+ MRD V+K+PG SW+E+K +H F
Sbjct: 529 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 588
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D SHP KEI LEEM K++Q GY PD KE L HHSEKLA+AF
Sbjct: 589 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 648
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LS G PI VMKNLR+C DCH AIK +S + GREI VRD RFH FKDGRCSC DYW
Sbjct: 649 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
F + AC L P +Q+HA ++R + N+ ++A Y+ G+L AR LF+R+P
Sbjct: 109 FSHLFRACRALRPL--RQLHAFAATSGAATDRFTANHLMLA-YADLGDLTAARELFERIP 165
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
N +S N + GY ++G A +LF+ M E N+ N
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWN 204
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + +C L G+ +H +K V + + +YS+CGCL + F
Sbjct: 338 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 397
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ F + +++AY A +LF Q+ +P V++ L+ A + G E +
Sbjct: 398 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 457
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + T G S HY V + L R
Sbjct: 458 DCFELMTK----TYGMQPS------------------------VKHYTCVVDLL----GR 485
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+G LDEA+ + M D V W +++ A
Sbjct: 486 SGCLDEAEALILSMPLTPDGVIWKTLLSA 514
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 355/647 (54%), Gaps = 42/647 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + R+ A +FD++ + ++VS+ L+ + G+ +L LF M
Sbjct: 11 NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ FT S + A N L + +Q+H + + GFD V NS++ YS+ G ++EA +
Sbjct: 71 PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACM 130
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F E+ +++ +SWN+M+ Y +AL LFQ+M + LD +T S L A + L
Sbjct: 131 F-EVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGA 189
Query: 247 LVGGLQFHAHLIKSGF--HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ G Q HA LI GF N+ + LIDLY KC G + +VF I + ++ W +
Sbjct: 190 IKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKC-GKLFMARRVFSHIEEKHVISWTAL 248
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIE 363
I GY+Q+ + +++ F++L D ++ ++ + GKQ+HA IK+
Sbjct: 249 ILGYAQEGNLA-ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP 307
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ ISV N+++ MY KCG + +A RLF MP N +S MI GY +HG+G EA+RLF
Sbjct: 308 SGVD-ISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLF 366
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ M + P ++T+++VL C+H+G V +GQ+YFS + G + EHY+CM+DLLGR
Sbjct: 367 DEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGR 426
Query: 484 AGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVPYVML 526
AG+L +A+ L+++MP G + L + L+L+ N V YVM+
Sbjct: 427 AGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMM 486
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
+NIYA +G W+E IR L++ + ++K+ G SW+E+ K++H F D +HP+ ++IH L
Sbjct: 487 SNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEIL 546
Query: 587 EEMSRKMKQA-GYV------------PDKEKRLVHHSEKLAVAFGLLSTSYGEP---ILV 630
+EM R+MK+ GYV K L HSEKLA+ L+ E I V
Sbjct: 547 KEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRV 606
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH IK +S I VRD RFH F+DG CSC DYW
Sbjct: 607 FKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ ++N L+ MY KCG L A +FDRM + N VS +++ G+ Q+G +E+L LF M
Sbjct: 7 LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL 66
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ + P + TF + L AC + G++ + GF+ + +ID+ + G++
Sbjct: 67 SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKT-GFDMVNVVGNSIIDMYSKCGRIN 125
Query: 489 DAERLIEAMP 498
+A + E MP
Sbjct: 126 EAACMFEVMP 135
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
GK +HA +K + N + +Y KCG ++ A F++ NV S+ V++ Y +
Sbjct: 296 GKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGK 355
Query: 78 QLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLF 119
A +LFD++ +PD V+Y ++ + G E F
Sbjct: 356 HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYF 401
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 357/657 (54%), Gaps = 65/657 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +FD I +P L+ +NT+ +A D SAL L+ M + +T L+ + +
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV--------------- 186
+ +QLH + GFD ++ SL++ Y +NG L++A++V
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 187 ---------------FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ +KD VSWN+ + Y + EAL+LF++M+ + D
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ ++L+A + G Q H+ + GF N I + LIDLY+KC G++ +F+
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKC-GELETACGLFQ 294
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ Y +AL F+ + R G P+D + + ++SAC++L
Sbjct: 295 GLSNKDVISWNTLIGGYTHMNLYK-EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAID 353
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + +++ +N S+ +L+ MY+KCG++E A+++FD M + S N+MI G
Sbjct: 354 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFG 413
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG A +F M + I P +ITFV +LSAC+H+G + G+ F M + P
Sbjct: 414 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMP 473
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDL G +G +AE++I M P + LKA A +
Sbjct: 474 KLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNL 533
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N YV+L+NIYA + +W EVA R L+ D+G++K PG S IE+ +H F+
Sbjct: 534 IKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFGL+
Sbjct: 594 DKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 653
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 654 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 37/279 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S L++ + + + + VF+ I +P L++WNTM G++
Sbjct: 21 IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHAL 80
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F ++ +C+ + + G+Q+H +K + +
Sbjct: 81 SSD-PVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLD-L 138
Query: 370 SVNNALVAMYSKCGNLEDAR-------------------------------RLFDRMPEH 398
++ +L++MY + G LEDA+ ++FD +P
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+ I+GYA+ G EAL LF+ M++TN+ P T V+VLSACA +G + G++
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S + D GF + + +IDL + G+L A L + +
Sbjct: 259 SWIND-HGFGXNLKIVNALIDLYSKCGELETACGLFQGL 296
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/757 (32%), Positives = 372/757 (49%), Gaps = 135/757 (17%)
Query: 22 HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRI 81
HA LK+ Y+S I YS C + A ++SF+ L+ A +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA--- 94
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL--IT 139
+LF Q ++ +F M D L L +
Sbjct: 95 ----KLFTQ------------------------SIGVFSRMFSHGLIPDSHVLPNLFKVC 126
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNS------------------------------ 169
A + + KQ+HC++ G D A V S
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186
Query: 170 -LLTCYSRNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
LL Y+R G L+E R+ EM G + VSWN ++ + + EA+ +FQ++ L
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
D T++S+L + E L G H ++IK G ++ + S +ID+Y K SG +
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK-SGHVYG 305
Query: 286 CMKVF-----------------------------------EEIPQPDLVLWNTMISGYSQ 310
+ +F E+ + ++V W ++I+G +Q
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ +AL F+++ G P+ + ++ AC N++ G+ H +++ + N +
Sbjct: 366 NGK-DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-V 423
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V +AL+ MY+KCG + ++ +F+ MP N V NS++ G++ HG E + +FE ++ T
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P I+F S+LSAC G EG KYF MM + +G +P EHYSCM++LLGRAGKL +
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A LI+ MPF P S +A AA LEP N YV+L+NIYAA
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
G W EV +IR M G++K PG SWI+VK +++ +A D SHP I +I ++E+S++
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 593 MKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
M+++G+ P ++E+ L HSEKLAV FGLL+T G P+ V+KNLRICGDC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H IKFIS+ AGREI +RDT RFH FKDG CSCGD+W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 193/484 (39%), Gaps = 106/484 (21%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV--SWNSMVVAYG 207
Q H + G + ++ L+ YS ++A V + I D S++S++ A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLV---LQSIPDPTIYSFSSLIYALT 92
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ + +++ +F M S L D + L ++ L G Q H SG ++
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL--------------------------- 300
+ + +Y +C G M D KVF+ + D+V
Sbjct: 153 VQGSMFHMYMRC-GRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 301 --------WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
WN ++SG++ + Y +A+ F+K++ +G+ PD + V+ + + ++
Sbjct: 212 GIEANIVSWNGILSGFN-RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--------------- 396
G+ IH IK + ++ V +A++ MY K G++ LF++
Sbjct: 271 GRLIHGYVIKQGLLKDK-CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 397 --------------------EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
E N VS S+IAG AQ+G +EAL LF M + P ++
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 437 TFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
T S+L AC + + G+ F++ + G S +ID+ + G++ ++ +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG---SALIDMYAKCGRINLSQIVF 446
Query: 495 EAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI-RRLMRDRGVQK 553
MP N V + L N ++ GK +EV +I LMR R
Sbjct: 447 NMMP------------------TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR---L 485
Query: 554 KPGF 557
KP F
Sbjct: 486 KPDF 489
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 141/314 (44%), Gaps = 10/314 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL + L G+ +H +K + + + I +Y K G + FNQ
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
+ N + +R + A ++F +Q + ++VS+ ++I+ A G AL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCY 174
LF++M+ + T+ ++ A N L + H A+ V ++L+ Y
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMY 433
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G ++ ++ VF M K+ V WNS++ + H + E + +F+ ++ +L D +
Sbjct: 434 AKCGRINLSQIVF-NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L+A + G ++ + + G S +++L + +G +++ + +E+
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR-AGKLQEAYDLIKEM 551
Query: 294 P-QPDLVLWNTMIS 306
P +PD +W +++
Sbjct: 552 PFEPDSCVWGALLN 565
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 327/543 (60%), Gaps = 39/543 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
++NSL+ Y + G + +A+RVF M +D SW S++ Y Q+ EAL L M+
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGM-PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +T AS+L A + G Q HA +K +H + ++GS L+D+YA+C G M
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARC-GRMDM 218
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+ VF+++ + V WN +I+G+++K + + L F ++ R G+ ++ V SA +
Sbjct: 219 AIAVFDQLESKNGVSWNALIAGFARKGD-GETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRIS--VNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+ GK +HA IK R+S V N ++ MY+K G++ DAR++FDR+ + + V+
Sbjct: 278 GIGALEQGKWVHAHMIK---SGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVT 334
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
NSM+ +AQ+G+G EA+ FE M + + ITF+S+L+AC+H G V EG++YF MMK
Sbjct: 335 WNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMK 394
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIA 505
+ + EPE +HY ++DLLGRAG L DA I MP P I
Sbjct: 395 E-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
AA+H +L+P + P V+L NIYA++G+W+ A +R++M+ GV+K+P SW+E++
Sbjct: 454 QFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENS 513
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKL 613
+H+FVA D +HP +EI+ EE+S ++++AGYVP +++ +L +HSEK+
Sbjct: 514 VHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKI 573
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AF L++ G I +MKN+RICGDCH+A ++IS + REI VRDT RFH F G CSC
Sbjct: 574 ALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSC 633
Query: 674 GDY 676
GDY
Sbjct: 634 GDY 636
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 143/266 (53%), Gaps = 15/266 (5%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S++TA L HAHL S F + + + LI LY KC G + D +VF+ +P
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKC-GAVADARRVFDGMPA 127
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQ 354
D+ W ++I+GY+Q + D+ALG + R + P+ +F ++ A ++ S +G+Q
Sbjct: 128 RDMCSWTSLIAGYAQ-NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHALT+K + + + V +AL+ MY++CG ++ A +FD++ N VS N++IAG+A+ G
Sbjct: 187 IHALTVKYDWHDD-VYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G L +F M T+ T+ SV SA A G + +G+ + M GE
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK------SGERL 299
Query: 475 SC-----MIDLLGRAGKLTDAERLIE 495
S ++D+ ++G + DA ++ +
Sbjct: 300 SAFVGNTILDMYAKSGSMIDARKVFD 325
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 8/276 (2%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H +V+ + LL YAR R+ A +FDQ+ + VS+N LI+ +A GD E+ L +F +
Sbjct: 197 HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAE 256
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ F+ FT S + +A + L K +H I G A V N++L Y+++G
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 316
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A++VF + + KD V+WNSM+ A+ Q+ G EA+ F+EM + L+ T SILT
Sbjct: 317 MIDARKVFDRVDK-KDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
A + + G Q+ + + ++DL + +G + D + ++P +P
Sbjct: 376 ACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGR-AGLLNDALVFIFKMPMKPTA 434
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+W ++ + + +G F + PDD
Sbjct: 435 AVWGALLGSCRM---HKNAKIGQFAADHVFELDPDD 467
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 42/329 (12%)
Query: 340 VISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+I+AC+ S + IHA + + + ++N+L+ +Y KCG + DARR+FD MP
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQF-AGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ S S+IAGYAQ+ + EAL L ML P TF S+L A + G++
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
++ + + + S ++D+ R G++ A IA+ F QLE
Sbjct: 189 ALTVK-YDWHDDVYVGSALLDMYARCGRMDMA-------------IAV-----FDQLESK 229
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK-----------PGFSWIEVKKQMH 567
N V + L +A G E + M+ G + G +E K +H
Sbjct: 230 NGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVH 289
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG-- 625
+ + G + + N + +M K +G + D K +K V + + T++
Sbjct: 290 AHMIKSGER-LSAFVGNTILDMYAK---SGSMIDARKVFDRVDKKDVVTWNSMLTAFAQY 345
Query: 626 ----EPILVMKNLRICGDCHNAIKFISAI 650
E + + +R CG N I F+S +
Sbjct: 346 GLGREAVTHFEEMRKCGVHLNQITFLSIL 374
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/540 (39%), Positives = 311/540 (57%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L Y +NG L A+++F EM E ++ +WN+MV E+L F +M +
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM 169
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D + L S+ L D+V G Q HA++++SG ++ +GS L +Y +C G +++
Sbjct: 170 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC-GCLQEGE 228
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
V +P +V NT+I+G +Q + S+ AL F + VG D +FV IS+CS+L
Sbjct: 229 AVLRMLPSLSIVSCNTIIAGRTQNGD-SEGALEYFCMMRSVGVAADVVTFVSAISSCSDL 287
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + G+QIH +K + + V LV MYS+CG L D+ R+F +T L++M
Sbjct: 288 AALAQGQQIHGQVMKAGV-DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 346
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ Y HG G +A+ LF+ M+ P+++TF+++L AC+H+G EG F +M +G
Sbjct: 347 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 406
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------A 509
+P +HY+C++DLLGR+G L +AE LI +MP P + K A
Sbjct: 407 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIA 466
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++L+P ++ YV+L+NI A S +W +V+ +R+ MRD V+K+PG SW+E+K +H F
Sbjct: 467 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 526
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D SHP KEI LEEM K++Q GY PD KE L HHSEKLA+AF
Sbjct: 527 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 586
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LS G PI VMKNLR+C DCH AIK +S + GREI VRD RFH FKDGRCSC DYW
Sbjct: 587 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
F + AC L P +Q+HA ++R + N+ ++A Y+ G+L AR LF+R+P
Sbjct: 47 FSHLFRACRALRPL--RQLHAFAATSGAATDRFTANHLMLA-YADLGDLTAARELFERIP 103
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
N +S N + GY ++G A +LF+ M E N+ N
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWN 142
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + +C L G+ +H +K V + + +YS+CGCL + F
Sbjct: 276 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ F + +++AY A +LF Q+ +P V++ L+ A + G E +
Sbjct: 336 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 395
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + T G S HY V + L R
Sbjct: 396 DCFELMTK----TYGMQPS------------------------VKHYTCVVDLL----GR 423
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+G LDEA+ + M D V W +++ A
Sbjct: 424 SGCLDEAEALILSMPLTPDGVIWKTLLSA 452
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/628 (36%), Positives = 344/628 (54%), Gaps = 38/628 (6%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR+LF Q+ PD NT+I YA + A+SL+ M E+ D +T ++ A +
Sbjct: 64 ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ L ++ HC + GF V N+L+ Y G A VF E ++D V+WN
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE-STVRDVVTWNI 182
Query: 202 MVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
M+ A+ +A L EM L L D T+ S++ A L +L G H++ +
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G +N + + ++D+Y KC D+ +VF I + D++ W +M+SG + K Y +AL
Sbjct: 243 GLDENLRVNNAILDMYCKCD-DIESAQEVFNRIREKDVLSWTSMLSGLA-KSGYFQEALA 300
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F+K+ D+ + V V+SAC+ GK IH L K EI + + + ALV MY
Sbjct: 301 LFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLV-LETALVDMY 359
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+KCG+++ A ++F RM N + N++I G A HG G +A+ LF+ M + P ++TF+
Sbjct: 360 AKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFI 419
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
++L AC+H G V EG F MK+ F EP EHY C++DLL RA K+ DA IE MP
Sbjct: 420 ALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPI 479
Query: 500 NPGSI-------ALKAANHF----------LQLEPSNAVPYVMLANIYAASGKWEEVATI 542
S+ A ++ HF ++LEP + YVML+N+YA +W+ +
Sbjct: 480 KANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKL 539
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK-QAGYVP- 600
R+ M+++G++K PG SWIE+ +H FVA D SH ++I+ +EEM+R++ G+VP
Sbjct: 540 RKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPG 599
Query: 601 -----------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+KE L HSEKLA+A GL+ST G PI ++KNLR+C DCH+ +K S
Sbjct: 600 TANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSK 659
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ REI RD RFH FK+G CSC D+W
Sbjct: 660 VYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 6/245 (2%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HA L+++ N S LI A SGD+ K+F ++ PD + NTMI GY++
Sbjct: 29 QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRI 369
+ +A+ + + G D+ ++ V++AC+ L + LG++ H +K S+ +
Sbjct: 89 SQN-PYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD-L 146
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE- 428
V NAL+ Y CG+ A +FD + V+ N MI + G+ +A L + M +
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKL 206
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
N+ P +T VS++ ACA G + G+ S K++ G + + ++D+ + +
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL-GLDENLRVNNAILDMYCKCDDIE 265
Query: 489 DAERL 493
A+ +
Sbjct: 266 SAQEV 270
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 344 CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY--SKCGNLEDARRLFDRMPEHNTV 401
C+++S + KQ HAL ++ + N + ++ L++ S G+L AR+LF +M +
Sbjct: 21 CTSISKT--KQAHALLLRTHLLHNPL-FSSKLISFLALSHSGDLNYARKLFTQMQNPDPF 77
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SM 460
N+MI GYA+ EA+ L+ +M+E +P N T+ VL+ACA G V G+++ +
Sbjct: 78 ICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEV 137
Query: 461 MKDMFG 466
+K+ FG
Sbjct: 138 LKNGFG 143
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H L K + L + +Y+KCG + A F +
Sbjct: 316 TLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRM 375
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ NVF++N L+ A A LFDQ+ PD V++ L+ A + G + L
Sbjct: 376 RVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGL 435
Query: 117 SLFKDMREK 125
++F+ M+ K
Sbjct: 436 AMFQAMKNK 444
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/641 (36%), Positives = 346/641 (53%), Gaps = 76/641 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AYA +A+AR++FD+IP+ +++ N +I +Y + G + +F M D
Sbjct: 81 LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPD 140
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S N+ + K++H A G V N L++ Y + GFL EA+ V
Sbjct: 141 HYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 200
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLED 246
EM +D VSWNS+V Y Q++ +AL++ +EM S+++ D T+AS+L A T+ E+
Sbjct: 201 EMSR-RDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 259
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ +Y K DM F ++ + LV WN MI
Sbjct: 260 V---------------------------MYVK---DM------FFKMGKKSLVSWNVMIG 283
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y K +A+ + + G+ PD S V+ AC + S SLGK+IH + ++
Sbjct: 284 VY-MKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 342
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + NAL+ MY+KCG L+ AR +F+ M + VS +MI+ Y G G +A+ LF
Sbjct: 343 PNLL-LENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 401
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M ++ + P +I FV+ L+AC+H G + EG+ F +M D + P EH +CM+DLLGRAG
Sbjct: 402 MQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 461
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
K+ +A + I+ MP P I L AA+ QL P + YV+L+N
Sbjct: 462 KVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSN 521
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G+WEEV IR +M+ +G++K PG S +EV + +H F+ D SHP EI+ L+
Sbjct: 522 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDV 581
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE---PILVMKN 633
+ +KMK+ GYVP DKE L HSEKLA+ F L++T + I + KN
Sbjct: 582 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKN 641
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
LRICGDCH A K IS I REI +RDT RFH F+ G CSC
Sbjct: 642 LRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 118/235 (50%), Gaps = 12/235 (5%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+ L +L + L+ L H+ +I NS +G L+ YA D+ KVF+
Sbjct: 44 FMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLK-DVATARKVFD 99
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPS 350
EIP+ ++++ N MI Y Y + + F + PD +F CV+ ACS + +
Sbjct: 100 EIPERNVIIINVMIRSYVNNGFYR-EGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIV 158
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+GK+IH K+ + S+ + V N LV+MY KCG L +AR + D M + VS NS++AGY
Sbjct: 159 IGKKIHGSATKVGL-SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGY 217
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
AQ+ +AL + M I T S+L A ++T E Y +KDMF
Sbjct: 218 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMY---VKDMF 267
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 181/419 (43%), Gaps = 61/419 (14%)
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
G + + +L ++ +H I + +S+ L+ Y+ + A++VF E+ E ++
Sbjct: 47 GQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPE-RN 105
Query: 196 EVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
+ N M+ +Y G +REG+ Q+F M S + D YT +L A + ++V G +
Sbjct: 106 VIIINVMIRSYVNNGFYREGI---QVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKK 162
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
H K G +G+GL+ +Y KC G + + V +E+ + D+V WN++++GY+Q +
Sbjct: 163 IHGSATKVGLSSTLFVGNGLVSMYGKC-GFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQ 221
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN 372
+ D AL +++ V D + ++ A SN +
Sbjct: 222 RF-DDALEVCREMESVKISHDAGTMASLLPAVSNTTTE---------------------- 258
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N+ + +F +M + + VS N MI Y ++ + +EA+ L+ M
Sbjct: 259 -----------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFE 307
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P ++ SVL AC T ++ G+K + + P + +ID+ + G L A
Sbjct: 308 PDAVSITSVLPACGDTSALSLGKKIHGYI-ERKKLIPNLLLENALIDMYAKCGCLDRARD 366
Query: 493 LIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
+ E M + + V + + + Y SG+ + + M+D G+
Sbjct: 367 VFENM------------------KSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGL 407
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 152/358 (42%), Gaps = 67/358 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C ++V GK +H K + + ++ N + +Y KCG LS A ++
Sbjct: 143 TFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 202
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N L+A YA+ R A
Sbjct: 203 SRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 262
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--S 141
+ +F ++ + LVS+N +I Y A+ L+ M F+ D +++ ++ A
Sbjct: 263 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGD 322
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L L K++H + N+L+ Y++ G LD A+ VF M + +D VSW +
Sbjct: 323 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENM-KSRDVVSWTA 381
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ AYG G +A+ LF +M L D + L A + HA L++ G
Sbjct: 382 MISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACS-----------HAGLLEEG 430
Query: 262 FH-------------QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ H+ ++DL + +G +++ K +E+P +P+ +W ++
Sbjct: 431 RSCFKLMTDHYKITPRLEHLAC-MVDLLGR-AGKVKEAYKFIQEMPMEPNERVWGALL 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL C L GK +H + K L+P + L N I +Y+KCGCL A F
Sbjct: 312 SITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLDRARDVFEN 370
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESA 115
+ +V S+ +++AY R A LF ++ PD +++ T ++A + G E
Sbjct: 371 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEG 430
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
S FK M TD + ++ ++ L C+ G
Sbjct: 431 RSCFKLM------TDHYKITP----------RLEHLACMVDLLG---------------- 458
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG----LEALQLFQ 220
R G + EA + EM +E W +++ A H L A +LFQ
Sbjct: 459 RAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQ 507
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 310/540 (57%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y +NG L+ A+++F EM ++ +WN+MV E+L F M +
Sbjct: 4 NILIGGYVKNGDLETARKLFDEM-PARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 62
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D Y L S+ L D+V G Q HA++++SG ++ +GS L +Y +C G +RD
Sbjct: 63 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC-GFLRDGE 121
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+P ++V NT ISG +Q + ++ AL F + G + +FV +++CS+L
Sbjct: 122 AALRALPSLNIVSCNTTISGRTQNGD-AEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL 180
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + G+QIHAL IK + + V +LV MYS+CG L D+ R+ + V ++M
Sbjct: 181 AALAQGQQIHALAIKTGV-DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 239
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ Y HG G +A+ LF+ M+ P +TF+++L AC+H+G EG F +M +G
Sbjct: 240 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 299
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------A 509
+P +HY+C++DLLGR+G L +AE LI +MP P + K A
Sbjct: 300 LQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIA 359
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++L+P ++ YV+L+NI A S +WE+V+ +R MR++ V+K+PG SW+E+K Q+H F
Sbjct: 360 ERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQF 419
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D SH +EI LEEM +++Q GY PD KE L HHSEKLA+AF
Sbjct: 420 CTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAF 479
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LS G PI VMKNLR+C DCH AIK +S + GREI VRD RFH FKDG+CSCGDYW
Sbjct: 480 AFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 41/316 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+ + C G RD+V+G+ +HA +++ + + + +Y +CG L A
Sbjct: 72 LFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR------ 125
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+P ++VS NT IS GD E AL F MR
Sbjct: 126 -------------------------ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRG 160
Query: 125 KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + T +T+ S+ L +Q+H LAI G D V SL+ YSR G L +
Sbjct: 161 AGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGD 220
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA-- 240
++RV E D V ++M+ AYG H G +A+ LF++M++ + T ++L A
Sbjct: 221 SERVCLEYSGT-DLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACS 279
Query: 241 FTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
+ L+D G+ + K+ G + + ++DL + SG + + + +P QPD
Sbjct: 280 HSGLKD--EGMNCFELMTKTYGLQPSVKHYTCIVDLLGR-SGCLNEAEDLILSMPVQPDG 336
Query: 299 VLWNTMISGYSQKEEY 314
V+W T++S ++++
Sbjct: 337 VIWKTLLSACKTQKKF 352
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 91/232 (39%), Gaps = 42/232 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + +C L G+ +HAL +K V + + +YS+CGCL
Sbjct: 169 TFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCL---------- 218
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ + DLV + +ISAY G + A+ LFK
Sbjct: 219 ---------------------GDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFK 257
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC-------GFDHYASVNNSLLTC 173
M + + T L+ A S++ + ++C + HY + + L
Sbjct: 258 QMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLL--- 314
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R+G L+EA+ + M D V W +++ A ++ A ++ + ++ L
Sbjct: 315 -GRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 365
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/598 (35%), Positives = 337/598 (56%), Gaps = 73/598 (12%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSR-NGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
+KQ+H G + V LL ++ + +D R+ ++ E + W +++ Y
Sbjct: 55 VKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGY 114
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH-LIKSGFHQN 265
+E++ L+ M +G +T ++L A ++ D+ G Q H ++ GF +
Sbjct: 115 ALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSD 174
Query: 266 SHIGSGLIDLYAKCS------------------------------GDMRDCMKVFEEIPQ 295
++G+ LID+Y KC G+M ++F+ +P
Sbjct: 175 LYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPM 234
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
D+V W M++GY+Q +AL F+++ G D+ + V VISAC+ L G
Sbjct: 235 KDMVAWTAMVTGYAQNAR-PREALEVFERMQAAGVKTDEVTLVGVISACAQL----GAAK 289
Query: 356 HALTIKIEIR------SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+A ++ ++ + V +AL+ MY+KCG++EDA ++F+RM E N S +SMI G
Sbjct: 290 YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG+ A+ LF+ ML+T I P +TF+ VL+AC+H G V +GQ+ F+MM++ G P
Sbjct: 350 FAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP 409
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHF 512
+HY+CM+DLLGRAG+L +A L++ MP NP +A AA+H
Sbjct: 410 SEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHL 469
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ-MHVFVA 571
+LEP+ Y++L+NIYA++G+W++V+ +R+LMR +G++K PG SW+E KK +H F A
Sbjct: 470 FELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFA 529
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVP----------DKEKR--LVHHSEKLAVAFGL 619
D SHP +EI LE++ ++K GY P D+EK+ L+ HSEKLA+AFGL
Sbjct: 530 GDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGL 589
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+T+ G I ++KNLRIC DCH+ + S I GREI VRD RFH F+DGRCSCG++W
Sbjct: 590 LTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 9/312 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF +LK C D+ G+ +H L Y+ N I +Y KCGCL H F++
Sbjct: 141 TFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDE 200
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+ L+ AYA+ + +A +LFD +P D+V++ +++ YA AL +F
Sbjct: 201 MLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVF 260
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS--VNNSLLTCYS 175
+ M+ TD TL G+I+A + + +A GF ++ V ++L+ Y+
Sbjct: 261 ERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYA 320
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G +++A +VF M E ++ S++SM+V + H A++LF EM+ ++ + T
Sbjct: 321 KCGSVEDAYKVFERMEE-RNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFI 379
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+LTA + + G Q A + + G + + ++DL + +G + + + + + +P
Sbjct: 380 GVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGR-AGRLEEALNLVKMMP 438
Query: 295 -QPDLVLWNTMI 305
P +W ++
Sbjct: 439 MNPHGGVWGALL 450
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 48/353 (13%)
Query: 85 RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN- 143
R +F Q+ P+ + LI YA G ++ L+ MR + FT + L+ A S
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 144 -NLCLIKQLHCLAIYC-GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE--------- 192
++ L +Q+H I GF V N+L+ Y + G L RVF EM +
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 193 ---------------------IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
+KD V+W +MV Y Q+ EAL++F+ M + + D
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIK-----SGFHQNSH--IGSGLIDLYAKCSGDMR 284
TL +++A L G +A+ ++ SGF S+ +GS LID+YAKC G +
Sbjct: 273 VTLVGVISACAQL-----GAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKC-GSVE 326
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
D KVFE + + ++ +++MI G++ + A+ F ++ + P+ +F+ V++AC
Sbjct: 327 DAYKVFERMEERNVYSYSSMIVGFAM-HGLAGAAMELFDEMLKTEIKPNRVTFIGVLTAC 385
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
S+ G+Q+ A+ + + +V + + G LE+A L MP
Sbjct: 386 SHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMP 438
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 310/540 (57%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y +NG L+ A+++F EM ++ +WN+MV E+L F M +
Sbjct: 112 NILIGGYVKNGDLETARKLFDEM-PARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 170
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D Y L S+ L D+V G Q HA++++SG ++ +GS L +Y +C G +RD
Sbjct: 171 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC-GFLRDGE 229
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+P ++V NT ISG +Q + ++ AL F + G + +FV +++CS+L
Sbjct: 230 AALRALPSLNIVSCNTTISGRTQNGD-AEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL 288
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + G+QIHAL IK + + V +LV MYS+CG L D+ R+ + V ++M
Sbjct: 289 AALAQGQQIHALAIKTGV-DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 347
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ Y HG G +A+ LF+ M+ P +TF+++L AC+H+G EG F +M +G
Sbjct: 348 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 407
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------A 509
+P +HY+C++DLLGR+G L +AE LI +MP P + K A
Sbjct: 408 LQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIA 467
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++L+P ++ YV+L+NI A S +WE+V+ +R MR++ V+K+PG SW+E+K Q+H F
Sbjct: 468 ERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQF 527
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D SH +EI LEEM +++Q GY PD KE L HHSEKLA+AF
Sbjct: 528 CTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAF 587
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LS G PI VMKNLR+C DCH AIK +S + GREI VRD RFH FKDG+CSCGDYW
Sbjct: 588 AFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 327 RVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
R G + F + AC L L +Q+HA ++R + N+ L+A Y+ G+
Sbjct: 38 REGLWSEPGLFSHIFRACQALP--LLRQLHAFAATSGAAADRFTANHLLLA-YADLGDFP 94
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
AR LF+R+P+ N +S N +I GY ++G A +LF+ M N+ T+ ++++
Sbjct: 95 TARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVA----TWNAMVAGLT 150
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPE 470
++G E +F M+ G +P+
Sbjct: 151 NSGLNEESLGFFFAMRRE-GMQPD 173
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 91/232 (39%), Gaps = 42/232 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + +C L G+ +HAL +K V + + +YS+CGCL
Sbjct: 277 TFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCL---------- 326
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ + DLV + +ISAY G + A+ LFK
Sbjct: 327 ---------------------GDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFK 365
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC-------GFDHYASVNNSLLTC 173
M + + T L+ A S++ + ++C + HY + + L
Sbjct: 366 QMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLL--- 422
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R+G L+EA+ + M D V W +++ A ++ A ++ + ++ L
Sbjct: 423 -GRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 473
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/657 (34%), Positives = 361/657 (54%), Gaps = 52/657 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ + N L+ Y + A ++FD +P+ ++VS+ L+S + GD +LSLF +M
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 124 EKRFDTDGFTLS------GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + FT S GL+ A L Q+H + GF+ V NSL+ YS+
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGL----QIHGFCLKIGFEMMVEVGNSLVDMYSKC 518
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG--LDMYTLA 235
G ++EA++VF M + +SWN+M+ Y G AL F M ++ D +TL
Sbjct: 519 GRINEAEKVFRWMVG-RSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A +S + G Q H L++SGFH ++ I L+DLY KC G++ K F++I
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC-GNLFSARKAFDQI 636
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ ++ W+++I GY+Q+ ++ +A+G FK+L + D +I ++ + G
Sbjct: 637 KEKTMISWSSLILGYAQEGDFV-EAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQG 695
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
KQ+ AL +K+ SV+N+LV MY KCG +++A + F M + +S MI GY +
Sbjct: 696 KQMQALVVKLP-SGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGK 754
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG+G +A+ +F ML NI P + +++VLSAC+H+G + EG++ FS + + G +P E
Sbjct: 755 HGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVE 814
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQL 515
HY+C++DLLGRAG+L +A+ L++ MP P G I L + L++
Sbjct: 815 HYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 874
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ N YVM++N+Y +G W E R L +G+QK+ G SW+E+++++H F + + S
Sbjct: 875 DGKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDS 934
Query: 576 HPMIKEIHNYLEEMSRKMKQA-GYV------------PDKEKRLVHHSEKLAVAFGLLS- 621
HP+ I L+E+ R++++ GYV KE+ L HSEKLA+ L +
Sbjct: 935 HPLTLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 994
Query: 622 --TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
G+ I V KNLR+C DCH IK +S I VRD RFH F+DG CSCGDY
Sbjct: 995 GLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 149/312 (47%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN--LVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
T +LK C + GK +H +++ P SA ++ + LY KCG L +A AF+
Sbjct: 575 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFD 634
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q + + S++ L+ YA++ GD A+ L
Sbjct: 635 QIKEKTMISWSSLILGYAQE-------------------------------GDFVEAMGL 663
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK ++E D F LS +I ++ L KQ+ L + SV+NSL+ Y +
Sbjct: 664 FKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLK 723
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +DEA++ F EM ++KD +SW M+ YG+H G +A+ +F +M+ + D +
Sbjct: 724 CGLVDEAEKCFAEM-QLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLA 782
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G + + L+++ G + ++DL + +G +++ + + +P
Sbjct: 783 VLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGR-AGRLKEAKHLVDTMPI 841
Query: 295 QPDLVLWNTMIS 306
+P++ +W T++S
Sbjct: 842 KPNVGIWQTLLS 853
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 329/571 (57%), Gaps = 35/571 (6%)
Query: 137 LITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
L S +L +Q+H I G V + L+ YS+ + +VF E E K
Sbjct: 62 LSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEE-SERKSS 120
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
+W+S++ ++ Q+ E + A+Q F M+ L D + S A L G H
Sbjct: 121 TTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCL 180
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+IK+G+ + +GS L+D+YAKC GD+++ VF+E+P ++V W+ MI GY+Q E+ +
Sbjct: 181 VIKTGYDVDVFVGSSLVDMYAKC-GDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEH-E 238
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
+A+ FK+ G +D + VI C + + LGKQIH L K + V ++L
Sbjct: 239 EAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGF-VGSSL 297
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+++YSKCG +E A R+FD +P N N+M+ AQH EA LF M + P
Sbjct: 298 ISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNF 357
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
ITF+ VL AC+H G V EG+KYF++MK + EP +HY+ M+DLLGRAGKL +A +I+
Sbjct: 358 ITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIK 416
Query: 496 AMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
MP P +A AA+ +L ++ +VML+N YAA+G++E+
Sbjct: 417 GMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYED 476
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
A R+++RDRGV+K+ G SWIE ++H F A D H +KEI+ LE++ +M++AGY
Sbjct: 477 AAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGY 536
Query: 599 VPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
V D K + + +HSE+LA+AFGL+S G PI +MKNLR+CGDCHNAIKF
Sbjct: 537 VADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKF 596
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS ++GR I VRD RFH F+DG+CSC DYW
Sbjct: 597 ISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 134/272 (49%), Gaps = 13/272 (4%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ +L + T L+ G Q HAH+IKSG + LI+ Y+K + +VFEE
Sbjct: 57 ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSS-QVFEES 115
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ W+++IS ++Q EE A+ F ++ PDD F AC+ L +G
Sbjct: 116 ERKSSTTWSSVISSFAQNEE-PVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVG 174
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K +H L IK + + V ++LV MY+KCG++++AR +FD MP N VS + MI GY Q
Sbjct: 175 KSVHCLVIKTGYDVD-VFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQ 233
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY----FSMMKDMFGFE 468
G EA+RLF+ L + + T SV+ C + G++ F D+ GF
Sbjct: 234 LGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFV 293
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
S +I L + G + A R+ + +P
Sbjct: 294 G-----SSLISLYSKCGLIEGAYRVFDEVPIK 320
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 40/311 (12%)
Query: 2 FRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
F K C +GR D+ GKS+H L +K ++ + + +Y+KCG
Sbjct: 158 FPSATKACAILGRCDV--GKSVHCLVIKTGYDVDVFVGSSLVDMYAKCG----------- 204
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
I AR +FD++P ++VS++ +I Y G+ E A+ LF
Sbjct: 205 --------------------DIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLF 244
Query: 120 KDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
K+ + D + FTLS +I S+ L L KQ+H L +D V +SL++ YS+
Sbjct: 245 KEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKC 304
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ A RVF E+ IK+ WN+M++A QH EA LF +M + + + T +
Sbjct: 305 GLIEGAYRVFDEV-PIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCV 363
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
L A + + G ++ A + K + + ++DL + +G +++ + V + +P +P
Sbjct: 364 LYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGR-AGKLQEALSVIKGMPTEP 422
Query: 297 DLVLWNTMISG 307
+W I+G
Sbjct: 423 TESVWGAFITG 433
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 79/209 (37%), Gaps = 37/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V++ C L GK +H L K S ++ + I LYSKCG + A+ F++
Sbjct: 258 TLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEV 317
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N +L A A+ A LF ++ +P+ +++ ++ A + G E
Sbjct: 318 PIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGK 377
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M++ + G HYAS+ + L R
Sbjct: 378 KYFALMKKYEIEP-----------------------------GTQHYASMVDLL----GR 404
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G L EA V M E W + +
Sbjct: 405 AGKLQEALSVIKGMPTEPTESVWGAFITG 433
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 349/613 (56%), Gaps = 45/613 (7%)
Query: 102 LISAYADCGDTESALSLFKDM---REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC 158
+IS + E ++ +F DM RFD A L L Q+ CLAI C
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
GF + S+ L++ +S+ G ++ A+ +F E+ + KD +S N+M+ + + E ++++L
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRK-KDLISCNAMISGFTCNGETEDSVRL 119
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F+E++S + T+ ++ ++ H +K G +S + + L +Y +
Sbjct: 120 FKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
+ +M ++F+E + L WN MISG +Q +D A+ F+ + + +P+ +
Sbjct: 180 LN-EMIFARQLFDESAEKTLASWNAMISGCTQNG-LTDAAISLFQTMQKNNVNPNPVTVT 237
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNR----ISVNNALVAMYSKCGNLEDARRLFD 393
++SAC+ + SLG+ +H+L I+SNR + V+ AL+ MY+KCG++ AR LFD
Sbjct: 238 SILSACAQIGALSLGEWVHSL-----IKSNRFESNVYVSTALIDMYAKCGSITVARELFD 292
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
MPE N V+ N+MI+GY HG G EAL+LF ML +++ PT +TF+SVL AC+H G V E
Sbjct: 293 LMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKE 352
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG----------- 502
G F M FGFEP EHY+CM+D+LGRAG+L A I+AMP PG
Sbjct: 353 GDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGAC 412
Query: 503 ------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
++A A+ +L+P N YV+++NIY+ K+ + A++R++ + + + K PG
Sbjct: 413 MIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPG 472
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY----------VPDKEKRL 606
+ IE+ + HVF + D SHP K I+ L++++ KM +AG+ + ++EK L
Sbjct: 473 CTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKEL 532
Query: 607 VH--HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
HSEKLA+AFGL+ST G I ++KNLR+C DCHN KF+S I R I VRD RFH
Sbjct: 533 TMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFH 592
Query: 665 CFKDGRCSCGDYW 677
FKDG CSCGDYW
Sbjct: 593 HFKDGLCSCGDYW 605
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 142/278 (51%), Gaps = 5/278 (1%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L++ +++ + AR LF +I + DL+S N +IS + G+TE ++ LFK++
Sbjct: 72 LISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVS 131
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T+ GLI S + L +H + G ++SV+ +L T Y R + A+++F
Sbjct: 132 SSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFD 191
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
E E K SWN+M+ Q+ A+ LFQ M + + T+ SIL+A + L
Sbjct: 192 ESAE-KTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALS 250
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H+ + + F N ++ + LID+YAKC G + ++F+ +P+ + V WN MISGY
Sbjct: 251 LGEWVHSLIKSNRFESNVYVSTALIDMYAKC-GSITVARELFDLMPEKNEVTWNAMISGY 309
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ +AL F + P +F+ V+ ACS+
Sbjct: 310 GL-HGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSH 346
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 149/296 (50%), Gaps = 15/296 (5%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L +G+ + + + L+P + + ++ C C+ H++V + L
Sbjct: 124 LSSGERVSSSTIVGLIPVYSPFGHSYL-----CNCIHGFCVKLGIVSHSSVST--ALTTV 176
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y R + ARQLFD+ + L S+N +IS G T++A+SLF+ M++ + + T+
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236
Query: 135 SGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
+ +++A + L L + +H L F+ V+ +L+ Y++ G + A+ +F M E
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV--GG 250
K+EV+WN+M+ YG H G EAL+LF +M+S + T S+L A S LV G
Sbjct: 297 -KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYA-CSHAGLVKEGD 354
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
FH + GF + + ++D+ + +G ++ ++ + +P +P +W ++
Sbjct: 355 GIFHTMVHDFGFEPLAEHYACMVDILGR-AGQLKKALEFIKAMPVEPGPPVWGALL 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 36/215 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L G+ +H+L N + Y+S I +Y+KCG
Sbjct: 235 TVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCG------------ 282
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I AR+LFD +P+ + V++N +IS Y G + AL LF
Sbjct: 283 -------------------SITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFY 323
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ----LHCLAIYCGFDHYASVNNSLLTCYSR 176
DM G T ++ A S+ L+K+ H + GF+ A ++ R
Sbjct: 324 DMLSSSVKPTGLTFLSVLYACSHA-GLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGR 382
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
G L +A M W +++ A H++
Sbjct: 383 AGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKD 417
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/668 (35%), Positives = 366/668 (54%), Gaps = 49/668 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H + F L+ YA+ + +AR++FD++P+ ++VS+ TL++ Y E
Sbjct: 94 HIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPEL 153
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F++M E +TL ++ASS+ + L KQ+H +I + AS+ NSL +
Sbjct: 154 AVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCS 213
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G L+ A + F + + K+ +SW +++ A+G + E LQ F EM+S + + +
Sbjct: 214 LYSKCGSLECAVKAFRRIRD-KNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEF 272
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S L+ ++ L G Q H+ IK GF N I + ++ LY KC G + + K+F+E
Sbjct: 273 TLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKC-GWIHEAKKLFDE 331
Query: 293 IPQPDLVLWNTMISGYSQKEEYSD----------QALGCFKKLNRVGYHPDDCSFVCVIS 342
+ LV WN MI+G+++ +++ +AL F KLNR G PD +F V+S
Sbjct: 332 METISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLS 391
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
CS+L G+Q+HA TIK S+ + V ALV MY+KCG++E A + F M +
Sbjct: 392 VCSSLVALEQGEQVHAQTIKTGFLSD-VVVGTALVNMYNKCGSIERASKAFVEMSIRTLI 450
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S SMI GYAQ+G +AL LFE M + P ITFV VLSAC+H G V E YF MM
Sbjct: 451 SWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMM 510
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SI 504
K+ + P +HY+C+ID+ R G+L +A I+ M P +
Sbjct: 511 KNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLEL 570
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA L L+P + Y +L N+Y ++GKW+EV+ +R++M++ + + +SWI +K
Sbjct: 571 GFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKD 630
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE----------------KRLVH 608
+++ F SH E++ L + K K GY ++ +V+
Sbjct: 631 KIYSFKRNARSHAQSGEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVY 690
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLA+AFGLL+TS PI V K++ +C DCHN I+ IS ++ REI +RD+ R H F +
Sbjct: 691 HSEKLAIAFGLLNTSNAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFIN 750
Query: 669 GRCSCGDY 676
G CSCGD+
Sbjct: 751 GHCSCGDF 758
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C + L G +H+L +K + + N + LY KCG + A F++
Sbjct: 273 TLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEM 332
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ ++N ++A +AR + A + DL ++ CG TE ALS+F
Sbjct: 333 ETISLVTWNAMIAGHARMMDFA----------KDDLAAHQ--------CG-TE-ALSIFL 372
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ D FT S +++ S+ + L + Q+H I GF V +L+ Y++ G
Sbjct: 373 KLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCG 432
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A + F EM I+ +SW SM+ Y Q+ + +AL LF++M + + T +L
Sbjct: 433 SIERASKAFVEMS-IRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVL 491
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S +V + ++K+ + + + LID++ + G + + +E+ +
Sbjct: 492 SA-CSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRL-GRLDEAFDFIKEMDLE 549
Query: 296 PDLVLWNTMISG 307
P+ +W+ +I+G
Sbjct: 550 PNEFIWSILIAG 561
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/699 (34%), Positives = 372/699 (53%), Gaps = 62/699 (8%)
Query: 37 SNHFILLYSKC---GCLSAAH----HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
S ++ L +C G L AA H A++F L+ Y R AR+LFD
Sbjct: 76 SAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFD 135
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCL 147
+P ++V++ LI+ + + AL +F +M E +TL G+++A S + L
Sbjct: 136 GMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDL 195
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+Q+H +I G D S+ NSL Y ++G L+ R F + K+ ++W +M+ +
Sbjct: 196 GQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD-KNVITWTTMISSCA 254
Query: 208 QHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ L+ L LF +M+ + + +TL S+++ + D+ G Q A K G N
Sbjct: 255 EDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 314
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD---------- 316
+ + + LY + G+ + M++FEE+ ++ WN MISGY+Q + +
Sbjct: 315 PVKNSTMYLYLR-KGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGF 373
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNAL 375
QAL F+ L R PD +F ++S CS + + G+QIHA TIK S+ + VN+AL
Sbjct: 374 QALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSD-VVVNSAL 432
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
V MY+KCG++E A + F MP V+ SMI+GY+QHG +A++LFE M+ + P
Sbjct: 433 VNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNE 492
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
ITFVS+LSAC++ G V E ++YF MM++ + EP +HY CM+D+ R G+L DA I+
Sbjct: 493 ITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIK 552
Query: 496 AMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
F P +A AA+ L+L+P YV+L N+Y ++G+W +
Sbjct: 553 RTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRD 612
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
VA +R+L + V SWI ++ +++ F A+D +HP E++ LE + K K GY
Sbjct: 613 VARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGY 672
Query: 599 VP--------------DKEKR-------LVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
P D +K + HHSE+LAVA GLL T G + V KN+ +C
Sbjct: 673 EPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMC 732
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
DCH++IK+ S +A REI VRD+ R H FKDGRCSCGD+
Sbjct: 733 RDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C L G+ +HA +K +++ + +Y+KCG + A AF +
Sbjct: 393 TFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEM 452
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ +++ Y++ R A QLF+ + +P+ +++ +L+SA + G E A
Sbjct: 453 PTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAE 512
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR + + + L+ DHY ++ + R
Sbjct: 513 RYFDMMRNE------YHIEPLV----------------------DHYG----CMVDMFVR 540
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
G LD+A G +E W+S+V H
Sbjct: 541 LGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSH 573
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/660 (33%), Positives = 362/660 (54%), Gaps = 39/660 (5%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
L+ +H + ++ V N L+ Y + ++ AR+LFD +P+ ++VS++ L++ Y
Sbjct: 45 LTITNHNYRDSK---VNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQN 101
Query: 110 GDTESALSLFKDM--REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G+ LFK M ++ F + + + + S KQ H A+ G + + V
Sbjct: 102 GNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVK 161
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+L+ YS+ + A ++ Y + D +N +V QH EA+ + + ++S +
Sbjct: 162 NALIQLYSKCSDVGAAIQILYTVPG-NDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGI 220
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T +I SL+D+ G Q HA ++KS + +IGS +ID+Y KC G++
Sbjct: 221 EWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKC-GNVLSGR 279
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
F+ + ++V W ++I+ Y Q E + ++AL F K+ P++ + + ++ + L
Sbjct: 280 TFFDRLQSRNVVSWTSIIAAYFQNE-FFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGL 338
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S LG Q+HA K ++ N + V NAL+ MY K G++ A+ +F M N ++ N++
Sbjct: 339 SALCLGDQLHARAEKSGLKGN-VMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAI 397
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G++ HG+G EAL +F+ M+ T P +TF+ V+ ACAH V EG YF+ + F
Sbjct: 398 ITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFR 457
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAA 509
P EHY+C++ LL R+G+L +AE + + N ++ K A
Sbjct: 458 IVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIA 517
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ LQLEP + Y++L+N++A +W+ V IR+LMR+R V+K+PG SW+E++ HVF
Sbjct: 518 EYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVF 577
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ED HP I+ ++++ K++ GYVPD K L +HSEKLAVA+
Sbjct: 578 TSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAY 637
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ T G PI V+KNLR+C DCH AIK IS +A R I VRD RFH F++G CSCGDYW
Sbjct: 638 GLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 36/334 (10%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
V GK H LK+ + F Y+ N I LYSKC
Sbjct: 140 VEGKQCHGYALKSGLEFHQYVKNALIQLYSKCS--------------------------- 172
Query: 76 ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
+ +A Q+ +P D+ YN +++ A+ + K + + + + T
Sbjct: 173 ----DVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYV 228
Query: 136 GL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
+ + AS ++ L KQ+H + D + +S++ Y + G + + R F++ +
Sbjct: 229 TIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNV-LSGRTFFDRLQS 287
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
++ VSW S++ AY Q+ EAL LF +M + + YT+A + + L L G Q
Sbjct: 288 RNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQL 347
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
HA KSG N +G+ LI +Y K SGD+ VF + +++ WN +I+G+S
Sbjct: 348 HARAEKSGLKGNVMVGNALIIMYFK-SGDILAAQSVFSNMTCCNIITWNAIITGHSH-HG 405
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+AL F+ + G P+ +F+ VI AC++L
Sbjct: 406 LGKEALSMFQDMMATGERPNYVTFIGVILACAHL 439
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ + + C +D+ GK +HA LK+ + Y+ + I +Y KCG + + F++
Sbjct: 226 TYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRL 285
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q NV S+ ++AAY + + F E AL+LF
Sbjct: 286 QSRNVVSWTSIIAAYFQN-------EFF------------------------EEALNLFS 314
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + +T++ L +++ + LCL QLH A G V N+L+ Y ++G
Sbjct: 315 KMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSG 374
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ VF M + ++WN+++ + H G EAL +FQ+M++ + T ++
Sbjct: 375 DILAAQSVFSNM-TCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVI 433
Query: 239 TAFTSLEDLVGGLQFHAHLIK 259
A L+ + G + HL+K
Sbjct: 434 LACAHLKLVDEGFYYFNHLMK 454
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 331 HPDDCSFVCVISACSNLSPSLGKQIHA-LTI-KIEIRSNRISVNNALVAMYSKCGNLEDA 388
H D + V + NL G+ IHA LTI R ++++ N+L+ +Y KC + A
Sbjct: 19 HQDPIKLLKVAADAKNLK--FGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIA 76
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LETNIPPTNITFVSVLSACAH 447
R+LFD MP N VS ++++AGY Q+G +E LF+ M ++ NI P + +S+C
Sbjct: 77 RKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDS 136
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
V Q + +K G E + +I L + + A +++ +P N
Sbjct: 137 QMYVEGKQCHGYALKS--GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGN 187
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/661 (34%), Positives = 358/661 (54%), Gaps = 57/661 (8%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDT 112
H ++ F N ++ YAR I AR++FD+IP + + +N ++S Y
Sbjct: 120 HVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESE 179
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY--CGFDHYASVNNSL 170
A LF M E+ T + ++T + +K L Y C + N++
Sbjct: 180 GQAQWLFDVMPERNV----ITWTAMVTGYAK----VKDLEAARRYFDCMPERSVVSWNAM 231
Query: 171 LTCYSRNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
L+ Y++NG +E R+F EM G DE +W +++ A + A L + + Q+
Sbjct: 232 LSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQI 291
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
L+ + ++L + + + L G ++NS + +I Y + G++
Sbjct: 292 QLNCFVRTALLDMYAKCGSIGAARRIFDEL---GAYRNSVTWNAMISAYTRV-GNLDSAR 347
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSN 346
++F +P ++V WN+MI+GY+Q + S A+ FK++ PD+ + V VISAC +
Sbjct: 348 ELFNTMPGRNVVTWNSMIAGYAQNGQ-SAMAIELFKEMITAKKLTPDEVTMVSVISACGH 406
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L LG + + +I+ + IS +NA++ MYS+CG++EDA+R+F M + VS N+
Sbjct: 407 LGALELGNWVVRFLTENQIKLS-ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 465
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+I+G+A HG G+EA+ L M E I P +TF+ VL+AC+H G + EG+K F +KD
Sbjct: 466 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-- 523
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GS------------IALKA 508
P +HY+CM+DLLGR G+L DA+R +E MP P GS + A
Sbjct: 524 ---PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELA 580
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
AN +LEP N+ +++L+NIYA++G+W++V IR M+ GV+K G+SW+E ++H
Sbjct: 581 ANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHK 640
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVA 616
F+ D SH +I+ L E+ +KM++AGY+ DK L HSEKLA+
Sbjct: 641 FIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAIC 700
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
+ LL + G I V+KNLR+C DCH AIK IS + GR I VRD RFHCF DG CSC DY
Sbjct: 701 YALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDY 760
Query: 677 W 677
W
Sbjct: 761 W 761
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 26/306 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+ C R D SL + + + ++ + +Y+KCG + AA F++
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDEL 321
Query: 61 -QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ N ++N +++AY R + SAR+LF+ +P ++V++N++I+ YA G + A+ LF
Sbjct: 322 GAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 381
Query: 120 KDM-REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA---SVNNSLLTCYS 175
K+M K+ D T+ +I+A +L ++ + + + + S +N+++ YS
Sbjct: 382 KEMITAKKLTPDEVTMVSVISACG-HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYS 440
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
R G +++AKRVF EM +D VS+N+++ + H G+EA+ L M + D T
Sbjct: 441 RCGSMEDAKRVFQEMA-TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 499
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-------SGDMRDCMK 288
+LTA + HA L++ G I ID YA C G++ D +
Sbjct: 500 GVLTACS-----------HAGLLEEGRKVFESIKDPAIDHYA-CMVDLLGRVGELEDAKR 547
Query: 289 VFEEIP 294
E +P
Sbjct: 548 TMERMP 553
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 48/316 (15%)
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
G I + N ++QLH I+ H+ L+ +R + + +
Sbjct: 5 GSIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPN 64
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+ SM+ Y ++ + + +F+ M + D + ++ + + GG+ FHA
Sbjct: 65 VFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-----GGIGFHA 119
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLVLWNTMISGYSQKEE 313
H++K G ++ + + +ID+YA+ G + KVF+EIP + + WN M+SGY K E
Sbjct: 120 HVLKLGHGSDAFVRNAVIDMYARL-GPIGHARKVFDEIPDYERKVADWNAMVSGY-WKWE 177
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN 373
QA F + P+ +
Sbjct: 178 SEGQAQWLFDVM------PE---------------------------------RNVITWT 198
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
A+V Y+K +LE ARR FD MPE + VS N+M++GYAQ+G+ E LRLF+ M+ I P
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEP 258
Query: 434 TNITFVSVLSACAHTG 449
T+V+V+SAC+ G
Sbjct: 259 DETTWVTVISACSSRG 274
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 326/559 (58%), Gaps = 35/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+Q+H + + + L+ Y R G LD+A+ V M E ++ VSW +M+ Y Q
Sbjct: 61 RQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPE-RNVVSWTAMISGYSQ 119
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
EAL+LF M+ + +TLA++LT+ + + Q H+ ++K+ F + +
Sbjct: 120 SGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFV 179
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+Y K SG++++ KVF+ +P+ D V +ISGY+Q D+AL F++L
Sbjct: 180 GSSLLDMYGK-SGNIQEARKVFDMLPERDTVSCTAIISGYAQLG-LDDEALDLFRQLYSS 237
Query: 329 GYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + +F ++++ S L S + GKQ+H L ++ E+ I + N+L+ MYSKCG L
Sbjct: 238 GMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKEL-PFFIVLQNSLIDMYSKCGKLLY 296
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+RR+FD MP+ + +S N+M+ GY +HGIG E ++LF M E + P ++T ++VLS C+H
Sbjct: 297 SRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSH 355
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG----- 502
G V EG F ++ HY C+IDLLGR+G+L A LIE MPF P
Sbjct: 356 GGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWG 415
Query: 503 ------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
S+ A L +EP NA YV+L+NIYAA+G W++V +R+LM +
Sbjct: 416 SLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENT 475
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V K+P SWI + K +H F + + HP K+I+ ++E+ +K AG+VPD
Sbjct: 476 VTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVD 535
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE+ L+ HSEKLA+ FGL++T G I VMKNLRIC DCHN KF+S + GREI++R
Sbjct: 536 DEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLR 595
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFH KDG C+CGDYW
Sbjct: 596 DKNRFHLLKDGACTCGDYW 614
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 152/264 (57%), Gaps = 9/264 (3%)
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+TA + L G Q HAH++K+ + ++ + LI LY +C G + D V + +P+ +
Sbjct: 48 ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC-GALDDARNVLDGMPERN 106
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIH 356
+V W MISGYSQ ++ +AL F ++ R G ++ + V+++C + S +Q+H
Sbjct: 107 VVSWTAMISGYSQSGRHA-EALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVH 165
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+L +K S+ + V ++L+ MY K GN+++AR++FD +PE +TVS ++I+GYAQ G+
Sbjct: 166 SLVVKTNFESH-MFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLD 224
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHY 474
EAL LF + + + +TF ++L++ + + G++ ++ K++ F
Sbjct: 225 DEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVL---Q 281
Query: 475 SCMIDLLGRAGKLTDAERLIEAMP 498
+ +ID+ + GKL + R+ + MP
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMP 305
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 133/250 (53%), Gaps = 13/250 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+++F + LL Y + I AR++FD +P+ D VS +IS YA G + AL LF+ +
Sbjct: 175 SHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQL 234
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ T + L+T+ S +L KQ+H L + + + NSL+ YS+ G L
Sbjct: 235 YSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKL 294
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++RVF M + + +SWN+M++ YG+H G E +QLF+ M ++ D TL ++L+
Sbjct: 295 LYSRRVFDNMPQ-RSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSG 352
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNS--HIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+ + GL ++K QN+ HIG +IDL + SG ++ + + E +P +
Sbjct: 353 CSHGGLVDEGLDIFDLIVKE---QNAVIHIGHYGCVIDLLGR-SGQLQKALDLIEHMPFE 408
Query: 296 PDLVLWNTMI 305
P +W +++
Sbjct: 409 PTPAIWGSLL 418
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L + G L GK +H L L+ +PF L N I +YSKCG L + F+
Sbjct: 245 TFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNM 304
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ---PDLVSYNTLISAYADCGDTESALS 117
+ S+N +L Y R QLF + + PD V+ ++S + G + L
Sbjct: 305 PQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLD 364
Query: 118 LF 119
+F
Sbjct: 365 IF 366
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/644 (36%), Positives = 345/644 (53%), Gaps = 86/644 (13%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
V +AA R+ + A + F P+ +YN L++ YA AL D R
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYA------RALGRLADARHL--- 71
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAK 184
FD + + N+LL+C+ +G D A+
Sbjct: 72 -------------------------------FDRIPTPDAVSYNTLLSCHFASGDADGAR 100
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
R+F M ++D VSWN+MV + EA +F M + + ++++ F
Sbjct: 101 RLFASM-PVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR----NSVSWNAMVSGFACS 155
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
D+ ++ + + G ++ + + ++ Y G++ ++ FE +P +LV WN +
Sbjct: 156 RDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDI-GNVVKAIEYFEAMPVRNLVSWNAV 211
Query: 305 ISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
++GY K ++D AL F+ + R P+ + V+ CSNLS GKQIH +K+
Sbjct: 212 VAGYV-KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 270
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ N ++V +LV+MY KCG+L A +LF M + V+ N+MI+GYAQHG G EA+ L
Sbjct: 271 PLSRN-LTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINL 329
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
FE M + + P ITFV+VL+AC HTG G + F M++++G EP +HYSCM+DLL
Sbjct: 330 FERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLC 389
Query: 483 RAGKLTDAERLIEAMPFNP-----GSI------------ALKAANHFLQLEPSNAVPYVM 525
RAGKL A LI +MPF P G++ A AA ++ +P +A YV
Sbjct: 390 RAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQ 449
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
LANIYA + +W++V+ +RR M+D V K PG+SWIE+K MH F + D HP + IH
Sbjct: 450 LANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEK 509
Query: 586 LEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L +++ +MK GYVPD K + L+ HSEKLA++FGL+ST+ G + + KN
Sbjct: 510 LGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKN 569
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCHNA K IS I REI +RDT RFH F+ G CSCGDYW
Sbjct: 570 LRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 181/387 (46%), Gaps = 50/387 (12%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQL-RIASARQLFDQIPQPDLVSYNTLISAY 106
G L+ A AF T ++N LLA YAR L R+A AR LFD+IP PD VSYNTL+S +
Sbjct: 31 GDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCH 90
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGL-----------------ITASSNNLCLIK 149
GD + A LF M + + +SGL + S + ++
Sbjct: 91 FASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVS 150
Query: 150 QLHC----LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV----FYEMGEIKDEVSWNS 201
C A F + +++L +G++D V ++E +++ VSWN+
Sbjct: 151 GFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNA 210
Query: 202 MVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+V Y ++ +AL+LF+ MV + + TL+S+L ++L L G Q H +K
Sbjct: 211 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 270
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
+N +G+ L+ +Y KC GD+ K+F E+ D+V WN MISGY+Q + +A+
Sbjct: 271 PLSRNLTVGTSLVSMYCKC-GDLSSACKLFGEMHTRDVVAWNAMISGYAQHGD-GKEAIN 328
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIR-----------SNRI 369
F+++ G P+ +FV V++AC IH IR R+
Sbjct: 329 LFERMKDEGVEPNWITFVAVLTAC----------IHTGLCDFGIRCFEGMQELYGIEPRV 378
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMP 396
+ +V + + G LE A L MP
Sbjct: 379 DHYSCMVDLLCRAGKLERAVDLIRSMP 405
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLS--NHFILLYSKCGCLSAAHHAFN 58
T VL C L GK +H +K +P S L+ + +Y KCG LS+A F
Sbjct: 243 TLSSVLLGCSNLSALGFGKQIHQWCMK--LPLSRNLTVGTSLVSMYCKCGDLSSACKLFG 300
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTES 114
+ +V ++N +++ YA+ A LF+++ +P+ +++ +++A G +
Sbjct: 301 EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDF 360
Query: 115 ALSLFKDMRE 124
+ F+ M+E
Sbjct: 361 GIRCFEGMQE 370
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH-GIGMEALRLF 423
RS+ S++ VA + G+L A F P T + N ++AGYA+ G +A LF
Sbjct: 13 RSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLF 72
Query: 424 EWMLETNIP-PTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMIDL 480
+ IP P +++ ++LS +G ++ F+ M +D+ ++ M+
Sbjct: 73 D-----RIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS-------WNTMVSG 120
Query: 481 LGRAGKLTDAERLIEAMP 498
L ++G + +A+ + AMP
Sbjct: 121 LSKSGAVEEAKAVFLAMP 138
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/650 (34%), Positives = 356/650 (54%), Gaps = 63/650 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V ++C G G LH LK+ + + + + +Y+KC
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCE------------ 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ A ++F+ +P P SYN +I YA AL +F+
Sbjct: 289 -------------------RMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQ 329
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK------QLHCLAIYCGFDHYASVNNSLLTCY 174
++ D +LSG +TA S +IK QLH LA+ CG V N++L Y
Sbjct: 330 SLQRNNLGFDEISLSGALTACS----VIKRHLEGIQLHGLAVKCGLGFNICVANTILDMY 385
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G L EA +F EM E +D VSWN+++ A+ Q+ E ++ L LF M+ + D +T
Sbjct: 386 GKCGALMEACLIFEEM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S++ A + L G + H +IKSG + +GS L+D+Y KC G + + K+ +
Sbjct: 445 GSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKC-GMLMEAEKIHARLE 503
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ V WN++ISG+S +++ S+ A F ++ +G PD+ ++ V+ C+N++ LGK
Sbjct: 504 EKTTVSWNSIISGFSSQKQ-SENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGK 562
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIHA +K+++ S+ + + + LV MYSKCGN++D+R +F++ P+ + V+ ++MI YA H
Sbjct: 563 QIHAQILKLQLHSD-VYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYH 621
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G +A+ LFE M N+ P + F+SVL ACAH G V +G YF M +G +P+ EH
Sbjct: 622 GLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEH 681
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
YSCM+DLLGR+G++ +A +LIE+MPF +A KA N LQL+
Sbjct: 682 YSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P ++ YV+LAN+YA G W EVA +R +M++ ++K+PG SWIEV+ ++H F+ D +H
Sbjct: 742 PQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
P +EI+ + +MK AGYVPD + L E+ GL +T E
Sbjct: 802 PRSEEIYEQTHLLVDEMKWAGYVPDIDFMLDEEMEEQDPYEGLKTTVCSE 851
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 270/498 (54%), Gaps = 12/498 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF +L+ C + L GK +H + + VP + Y++N + Y K ++ A F++
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVP-TIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+N L+ YA + A+ LFD +P+ D+VS+N+L+S Y G ++ +F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR + D T + ++ A S + L Q+HCLAI GF++ ++L+ YS+
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
LD+A RVF EM E ++ V W++++ Y Q+ +E L+LF++M+ + +G+ T AS+
Sbjct: 187 KKLDDAFRVFREMPE-RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ L G Q H H +KS F +S IG+ +D+YAKC M D KVF +P P
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCE-RMFDAWKVFNTLPNPP 304
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIH 356
+N +I GY+++++ +AL F+ L R D+ S ++ACS + L G Q+H
Sbjct: 305 RQSYNAIIVGYARQDQ-GLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLH 363
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
L +K + N I V N ++ MY KCG L +A +F+ M + VS N++IA + Q+
Sbjct: 364 GLAVKCGLGFN-ICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYS 475
++ L LF ML + + P + T+ SV+ ACA + G + + ++K G + S
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG--S 480
Query: 476 CMIDLLGRAGKLTDAERL 493
++D+ G+ G L +AE++
Sbjct: 481 ALVDMYGKCGMLMEAEKI 498
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ Y+ GN+ A+ LFD MPE + VS NS+++ Y +G+ +++ +F M IP
Sbjct: 76 NTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIP 135
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
TF +L AC+ G + + M GFE + S ++D+ + KL DA R
Sbjct: 136 HDYATFAVILKACSGIEDYGLGLQVHCLAIQM-GFENDVVTGSALVDMYSKCKKLDDAFR 194
Query: 493 LIEAMP 498
+ MP
Sbjct: 195 VFREMP 200
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/663 (33%), Positives = 364/663 (54%), Gaps = 42/663 (6%)
Query: 51 SAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCG 110
S+ HH++ + N+ N L+ Y + ++ AR LFD++ +VSYN L+ Y G
Sbjct: 44 SSTHHSYREF---NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSG 100
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHC--LAIYCGFDHYASVNN 168
+ + LFK+M + + + + +++A +++ + + + C G + V +
Sbjct: 101 EHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKS 160
Query: 169 SLLTCYSRNGFLDEAKRVF-YEMGEI---KDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
SL+ YS+ +D A +V E G I D +NS++ A + EA+++ MV
Sbjct: 161 SLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVD 220
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ D T S++ + DL GLQ HA L+K G + +GS L+D++ KC GD+
Sbjct: 221 EGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKC-GDVL 279
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF+ + ++V+W ++++ Y Q E+ ++ L ++R G ++ +F +++A
Sbjct: 280 SARKVFDGLQNRNVVVWTSLMTAYLQNGEF-EETLNLLSCMDREGTMSNEFTFAVLLNAF 338
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ ++ G +HA K+ I+ NR+ V NAL+ MYSKCG ++ + +F M + ++
Sbjct: 339 AGMAALRHGDLLHARVEKLGIK-NRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITW 397
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI GY+QHG+G +AL LF+ ML P ++TFV VLSACAH V EG Y + +
Sbjct: 398 NAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMK 457
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA-----------------L 506
F EP EHY+C++ +L RAG L +AE + +A
Sbjct: 458 HFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGT 517
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
K A LQ++P + Y +L+N+YA + W+ V IR++MR+R V+K+PG SWIE++ +
Sbjct: 518 KIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAV 577
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
HVF ++ +HP +I+N ++ + +KQ GYVP+ KE L +HSEKLA
Sbjct: 578 HVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLA 637
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+A+GL+ PI V+KNLRIC DCH A+K IS + R I VRD RFH F+DG C+C
Sbjct: 638 IAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCT 697
Query: 675 DYW 677
D+W
Sbjct: 698 DHW 700
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+ C RDL G +HA LK + F ++ + + ++ KCG + +A F+
Sbjct: 229 TYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGL 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+ NV V + +L++AY G+ E L+L
Sbjct: 289 QNRNV-------------------------------VVWTSLMTAYLQNGEFEETLNLLS 317
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + ++ FT + L+ A + L LH G + V N+L+ YS+ G
Sbjct: 318 CMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCG 377
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D + VF++M +D ++WN+M+ Y QH G +AL LFQ+M+S + T +L
Sbjct: 378 CIDSSYDVFFDMRN-RDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVL 436
Query: 239 TAFTSLEDLVGGLQFHAHLIK 259
+A L + G + L+K
Sbjct: 437 SACAHLALVNEGFYYLNQLMK 457
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 359/673 (53%), Gaps = 51/673 (7%)
Query: 50 LSAAHHAFNQTQHANV-----------FSFNVLLAAYARQLRIASARQLFDQIPQPDLVS 98
LS + FNQ +H + + N++L ++ +F Q+ +P++
Sbjct: 22 LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81
Query: 99 YNTLISAYA--DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCL 154
+NT+I DC D A+ L+ MR F + FT+ ++ A + L L ++H L
Sbjct: 82 WNTMIRGLVSKDCFD--DAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSL 139
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
+ G+DH V SLL+ Y + D+A +VF ++ + K+ VSW +++ Y E
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD-KNVVSWTAIITGYISSGHFRE 198
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A+ F++++ + L D ++L +L A L D G ++ SG +N + + L+D
Sbjct: 199 AIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLD 258
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y KC G++ +F +P+ D+V W+TMI GY+ QAL F ++ PD
Sbjct: 259 MYVKC-GNLERANLIFSAMPEKDIVSWSTMIQGYAFNG-LPQQALDLFFQMQSENLKPDC 316
Query: 335 CSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ V V+SAC+ L LG +L + E SN + + AL+ MYSKCG++ A +F
Sbjct: 317 YTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV-LGTALIDMYSKCGSVTQAWEIFT 375
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
M + + V N+M+ G + +G LF + + I P TF+ +L C H G V E
Sbjct: 376 AMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNE 435
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI--------- 504
G+++F+ MK +F P EHY CM+DLLGRAG L +A +LI MP P ++
Sbjct: 436 GRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGC 495
Query: 505 --------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
A + ++LEP N+ YV L+NIY+ + +WEE IR M+++ +QK
Sbjct: 496 KLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRA 555
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEK 604
SWIE+ +H F+ D SH + ++I+ L+E+ R++K G+VP +KE
Sbjct: 556 CSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEH 615
Query: 605 RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L +HSEKLAVAFGL+++ I V+KNLR+CGDCH+AIK IS I REI +RDT RFH
Sbjct: 616 FLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFH 675
Query: 665 CFKDGRCSCGDYW 677
F DG CSC DYW
Sbjct: 676 TFIDGSCSCRDYW 688
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 203/467 (43%), Gaps = 39/467 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C + D+ G +H+L +K ++ + LY KC A F+
Sbjct: 116 TIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFD-- 173
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
IP ++VS+ +I+ Y G A+ FK
Sbjct: 174 -----------------------------DIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ E D F+L ++ A + + + + G V SLL Y + G
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ A +F M E KD VSW++M+ Y + +AL LF +M S L D YT+ +L
Sbjct: 265 NLERANLIFSAMPE-KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A +L L G+ + + ++ F N +G+ LID+Y+KC G + ++F + + D
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC-GSVTQAWEIFTAMKKKDR 382
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V+WN M+ G S ++ F + + G PD+ +F+ ++ C++ + G+Q
Sbjct: 383 VVWNAMMVGLSM-NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIG 416
++ + I +V + + G L +A +L + MP + N V +++ G H
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
A ++ + ++E P + +V + + + + E +K S MK+
Sbjct: 502 HLAEQVLKKLIELE-PWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 242/720 (33%), Positives = 382/720 (53%), Gaps = 87/720 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +++C +D + +H + + SAYL+N +L+ +K G L A F+
Sbjct: 46 SFAAAIRSC---KDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLF 119
QH N+FS+N++++AYA + ++A LF ++ P +++ T +SA + GD + +
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMTFATALSACSSLGDLQRGREIH 162
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
++ R G ++ ++ + Y++ G
Sbjct: 163 ARIKASR--------------------------------GIRPSVILDTAIFSMYAKCGD 190
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG-LEALQLFQEMVSLQLGLDMYTLASIL 238
L AK VF + K+ VSWN+++ AY Q +AL LF++M + T +L
Sbjct: 191 LSTAKSVFDRI-PAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVL 249
Query: 239 TA---FTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
A TSLE + HA ++++G ++ + + L+++YAKC G + +F +
Sbjct: 250 GACNDVTSLE------KIHARIVETGLQFDVRDVGVQNALLNMYAKC-GSLEVARDIFRK 302
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
+ + D V N MI+ ++Q + +++ F++++ G DD +F VI+ACS
Sbjct: 303 MQRRDQVSMNVMIATFAQ-QGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEF 361
Query: 352 GKQIHALTIKIEIRSN----RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
GK+IH ++ + + V ALV+MY KCG LE A+ +F M N+VS N+M+
Sbjct: 362 GKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAML 421
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
A A G G EA + + +F+SVL AC+H+G + +F +M F
Sbjct: 422 AACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDL 481
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AAN 510
P E+Y CM+DLL R+G+L DA+ L+ +MPF+P +IA + AA
Sbjct: 482 VPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAE 541
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK-KPGFSWIEVKKQMHVF 569
LEP N PY +L+++Y+A+GK +E+ +R M++RG++K PG S IEV ++H F
Sbjct: 542 QAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEF 601
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
VA D SHP I +I L+ ++ ++KQAG+VP DKE+ L HSEKLAVAF
Sbjct: 602 VAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAF 661
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST G P+LV+KNLR+C DCH AIK IS + R ITVRD RFH F+ G CSCGDYW
Sbjct: 662 GLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/644 (36%), Positives = 345/644 (53%), Gaps = 86/644 (13%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
V +AA R+ + A + F P+ +YN L++ YA AL D R
Sbjct: 70 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYA------RALGRLADARHL--- 120
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAK 184
FD + + N+LL+C+ +G D A+
Sbjct: 121 -------------------------------FDRIPTPDAVSYNTLLSCHFASGDADGAR 149
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
R+F M ++D VSWN+MV + EA +F M + + ++++ F
Sbjct: 150 RLFASM-PVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR----NSVSWNAMVSGFACS 204
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
D+ ++ + + G ++ + + ++ Y G++ ++ FE +P +LV WN +
Sbjct: 205 RDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDI-GNVVKAIEYFEAMPVRNLVSWNAV 260
Query: 305 ISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
++GY K ++D AL F+ + R P+ + V+ CSNLS GKQIH +K+
Sbjct: 261 VAGYV-KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 319
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ N ++V +LV+MY KCG+L A +LF M + V+ N+MI+GYAQHG G EA+ L
Sbjct: 320 PLSRN-LTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINL 378
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
FE M + + P ITFV+VL+AC HTG G + F M++++G EP +HYSCM+DLL
Sbjct: 379 FERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLC 438
Query: 483 RAGKLTDAERLIEAMPFNP-----GSI------------ALKAANHFLQLEPSNAVPYVM 525
RAGKL A LI +MPF P G++ A AA ++ +P +A YV
Sbjct: 439 RAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQ 498
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
LANIYA + +W++V+ +RR M+D V K PG+SWIE+K MH F + D HP + IH
Sbjct: 499 LANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEK 558
Query: 586 LEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L +++ +MK GYVPD K + L+ HSEKLA++FGL+ST+ G + + KN
Sbjct: 559 LGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKN 618
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCHNA K IS I REI +RDT RFH F+ G CSCGDYW
Sbjct: 619 LRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 181/387 (46%), Gaps = 50/387 (12%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQL-RIASARQLFDQIPQPDLVSYNTLISAY 106
G L+ A AF T ++N LLA YAR L R+A AR LFD+IP PD VSYNTL+S +
Sbjct: 80 GDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCH 139
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGL-----------------ITASSNNLCLIK 149
GD + A LF M + + +SGL + S + ++
Sbjct: 140 FASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVS 199
Query: 150 QLHC----LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV----FYEMGEIKDEVSWNS 201
C A F + +++L +G++D V ++E +++ VSWN+
Sbjct: 200 GFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNA 259
Query: 202 MVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+V Y ++ +AL+LF+ MV + + TL+S+L ++L L G Q H +K
Sbjct: 260 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 319
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
+N +G+ L+ +Y KC GD+ K+F E+ D+V WN MISGY+Q + +A+
Sbjct: 320 PLSRNLTVGTSLVSMYCKC-GDLSSACKLFGEMHTRDVVAWNAMISGYAQHGD-GKEAIN 377
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIR-----------SNRI 369
F+++ G P+ +FV V++AC IH IR R+
Sbjct: 378 LFERMKDEGVEPNWITFVAVLTAC----------IHTGLCDFGIRCFEGMQELYGIEPRV 427
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMP 396
+ +V + + G LE A L MP
Sbjct: 428 DHYSCMVDLLCRAGKLERAVDLIRSMP 454
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLS--NHFILLYSKCGCLSAAHHAFN 58
T VL C L GK +H +K +P S L+ + +Y KCG LS+A F
Sbjct: 292 TLSSVLLGCSNLSALGFGKQIHQWCMK--LPLSRNLTVGTSLVSMYCKCGDLSSACKLFG 349
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTES 114
+ +V ++N +++ YA+ A LF+++ +P+ +++ +++A G +
Sbjct: 350 EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDF 409
Query: 115 ALSLFKDMRE 124
+ F+ M+E
Sbjct: 410 GIRCFEGMQE 419
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH-GIGMEALRLF 423
RS+ S++ VA + G+L A F P T + N ++AGYA+ G +A LF
Sbjct: 62 RSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLF 121
Query: 424 EWMLETNIP-PTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMIDL 480
+ IP P +++ ++LS +G ++ F+ M +D+ ++ M+
Sbjct: 122 D-----RIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS-------WNTMVSG 169
Query: 481 LGRAGKLTDAERLIEAMP 498
L ++G + +A+ + AMP
Sbjct: 170 LSKSGAVEEAKAVFLAMP 187
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/653 (35%), Positives = 352/653 (53%), Gaps = 43/653 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
VF N L++ YAR + ARQ+FD + D VS+N L+S Y G + L +F MR
Sbjct: 148 GVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMR 207
Query: 124 EKRFDTDGFTLSGLIT--ASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ F L +I A S++ + + +H + GFD + ++++ Y++ G
Sbjct: 208 RSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGA 267
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL------EALQLFQEMVSLQLGLDMYT 233
L EA +F + + + V +N+M+ + + EAL L+ E+ S + +T
Sbjct: 268 LSEAVALFKSVLD-PNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFT 326
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+S++ A D+ G Q H ++K F + IGS LIDLY SG M D + F +
Sbjct: 327 FSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLN-SGCMEDGFRCFTSV 385
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LG 352
P+ D+V W MISG Q E + ++AL F +L G PD + V++AC++L+ + G
Sbjct: 386 PKQDVVTWTAMISGCVQNELF-ERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+QI K ++ N+ + MY++ G++ A R F M H+ VS +++I+ +AQ
Sbjct: 445 EQIQCFATKSGF-GRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQ 503
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG +ALR F M++ + P ITF+ VL+AC+H G V EG KY+ MK+ + P +
Sbjct: 504 HGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIK 563
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQL 515
H +C++DLLGRAG+L DAE I F+ + ++ A+ ++L
Sbjct: 564 HCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMEL 623
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+PS++ YV L NIY +G+ + IR +M++RGV+K+PG SWIE++ +H FVA D S
Sbjct: 624 QPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKS 683
Query: 576 HPMIKEIHNYLEEMSRKM-----------KQAGYVPDKEKRLVHHSEKLAVAFGLLSTSY 624
HP I++ L EM K+ K + +++ + HSEKLAVA GL+
Sbjct: 684 HPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQ 743
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCH +K IS REI +RD RFH F+DG CSC DYW
Sbjct: 744 SAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 235/463 (50%), Gaps = 25/463 (5%)
Query: 51 SAAHHAFNQTQHAN--VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
+AA HA H + +F N LLAAY R AR+L D++P+ + VS+N LI AY+
Sbjct: 33 AAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSR 90
Query: 109 CGDTESALSLFKDMREK---RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS 165
G E++L F R R D + + + + L K +H L++ G
Sbjct: 91 AGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVF 150
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V+NSL++ Y+R G + +A++VF + + +D+VSWN++V Y + + L++F M
Sbjct: 151 VSNSLVSMYARCGDMGQARQVF-DAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRS 209
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+GL+ + L S++ +D V + H ++K+GF + + S ++ +YAK G +
Sbjct: 210 GIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAK-KGAL 268
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKE-----EYSDQALGCFKKLNRVGYHPDDCSFV 338
+ + +F+ + P++V++N MI+G + E + +AL + ++ G P + +F
Sbjct: 269 SEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFS 328
Query: 339 CVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
VI AC NL+ + GKQIH +K + + + +AL+ +Y G +ED R F +P
Sbjct: 329 SVIRAC-NLAGDIEFGKQIHGQVLKHCFQGDDF-IGSALIDLYLNSGCMEDGFRCFTSVP 386
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + V+ +MI+G Q+ + AL LF +L + P T SV++ACA G++
Sbjct: 387 KQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQ 446
Query: 457 Y--FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F+ F G SC I + R+G + A R + M
Sbjct: 447 IQCFATKSGFGRFTAMGN--SC-IHMYARSGDVHAAVRRFQEM 486
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 209/465 (44%), Gaps = 35/465 (7%)
Query: 5 VLKTCVGRRDLV--TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
V+K C G D V ++H +K +L++ + +Y+K G LS A F
Sbjct: 221 VIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLD 280
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
NV FN ++A R D + T + ALSL+ ++
Sbjct: 281 PNVVVFNAMIAGLCR-----------------DEAAVGTDV--------LREALSLYSEV 315
Query: 123 REKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + + FT S +I A + ++ KQ+H + F + ++L+ Y +G +
Sbjct: 316 QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCM 375
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++ R F + + +D V+W +M+ Q+ AL LF E++ L D +T++S++ A
Sbjct: 376 EDGFRCFTSVPK-QDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNA 434
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
SL G Q KSGF + + +G+ I +YA+ SGD+ ++ F+E+ D+V
Sbjct: 435 CASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYAR-SGDVHAAVRRFQEMESHDIVS 493
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTI 360
W+ +IS ++Q D AL F ++ P++ +F+ V++ACS+ + T+
Sbjct: 494 WSAVISSHAQHGCARD-ALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETM 552
Query: 361 KIEIR-SNRISVNNALVAMYSKCGNLEDARRLF-DRMPEHNTVSLNSMIAGYAQHGIGME 418
K E S I +V + + G L DA D + V S++A H ME
Sbjct: 553 KEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHR-DME 611
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+L + P ++ ++V++ + G+++ K +MK+
Sbjct: 612 RGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKE 656
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V++ C D+ GK +H LK+ ++ + I LY GC+ F
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFT-- 383
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+P+ D+V++ +IS E AL+LF
Sbjct: 384 -----------------------------SVPKQDVVTWTAMISGCVQNELFERALTLFH 414
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
++ D FT+S ++ A + +L + + Q+ C A GF + ++ NS + Y+R+
Sbjct: 415 ELLGAGLKPDPFTISSVMNACA-SLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARS 473
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A R F EM E D VSW++++ ++ QH +AL+ F EMV ++ + T +
Sbjct: 474 GDVHAAVRRFQEM-ESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGV 532
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMK-VFEEIP 294
LTA + + GL+++ +K + + I + ++DL + +G + D + + I
Sbjct: 533 LTACSHGGLVDEGLKYY-ETMKEEYALSPTIKHCTCVVDLLGR-AGRLADAEAFIRDSIF 590
Query: 295 QPDLVLWNTMIS 306
+ V+W ++++
Sbjct: 591 HDEPVIWRSLLA 602
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 250/742 (33%), Positives = 366/742 (49%), Gaps = 141/742 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V++ C R GK +H LK Y+ N I +Y+ CG
Sbjct: 143 TYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCG------------ 190
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR+LFD+ P D VS+N++++ Y GD E A +F
Sbjct: 191 -------------------NMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFD 231
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M ++ I AS NS++ + G +
Sbjct: 232 QMPQRN-----------IVAS--------------------------NSMIVLLGKMGQV 254
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA ++F EM E KD VSW++++ Y Q+ EAL +F EM + + LD + S+L+A
Sbjct: 255 MEAWKLFNEMDE-KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 313
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD--------------- 285
L + G H +I+ G ++ + LI +Y+ SG++ D
Sbjct: 314 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSG-SGEIMDAQKLFNGSHNLDQIS 372
Query: 286 -------CMK---------VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
CMK +F+ +P+ D+V W+ +ISGY+Q + +S + L F ++
Sbjct: 373 WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFS-ETLALFHEMQLGQ 431
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN----NALVAMYSKCGN 384
PD+ V VISAC++L+ GK +HA IR N + VN L+ MY KCG
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAY-----IRKNGLKVNVILGTTLLDMYMKCGC 486
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E+A +F+ M E S N++I G A +G+ +L +F M + P ITF+ VL A
Sbjct: 487 VENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGA 546
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-- 502
C H G V EG+ +F+ M + G EP +HY CM+DLLGRAG L +AE+LIE+MP P
Sbjct: 547 CRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVA 606
Query: 503 ---------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ + ++L+P + +V+L+NI+A+ G WE+V +R +M+
Sbjct: 607 TWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMK 666
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------ 601
+GV K PG S IE +H F+A D +HP I ++ L EM++++K GY PD
Sbjct: 667 QQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSL 726
Query: 602 ------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
KE L HSEKLA+AFGLL+ S PI +MKNLRIC DCH A K IS REI
Sbjct: 727 DIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREI 786
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD +RFH FK+G CSC DYW
Sbjct: 787 VVRDRHRFHYFKEGACSCMDYW 808
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 172/366 (46%), Gaps = 47/366 (12%)
Query: 132 FTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF--LDEAKRVF 187
TLS L T N NL ++ I GF + LL + + F LD + ++F
Sbjct: 39 ITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF 98
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ E + WN+M+ AY Q +AL L++ MV +G D YT ++ A
Sbjct: 99 DRI-ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 157
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
GG + H H++K GF + ++ + LI++YA C G+MRD K+F+E P D V WN++++G
Sbjct: 158 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVC-GNMRDARKLFDESPVLDSVSWNSILAG 216
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSN 367
Y +K + + L I ++
Sbjct: 217 YVKKGDVEEAKL----------------------------------------IFDQMPQR 236
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
I +N+++ + K G + +A +LF+ M E + VS +++I+GY Q+G+ EAL +F M
Sbjct: 237 NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN 296
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + VSVLSACAH V G+ ++ M G E + +I + +G++
Sbjct: 297 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM-GIESYVNLQNALIHMYSGSGEI 355
Query: 488 TDAERL 493
DA++L
Sbjct: 356 MDAQKL 361
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L+ + ++FDR+ N N+M+ Y Q +AL L++ M++ N+ P N T+ V+ A
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
CA + G K GF+ + + +I++ G + DA +L + P
Sbjct: 151 CA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESP 203
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 358/673 (53%), Gaps = 51/673 (7%)
Query: 50 LSAAHHAFNQTQHANV-----------FSFNVLLAAYARQLRIASARQLFDQIPQPDLVS 98
LS + FNQ +H + + N++L ++ +F Q+ +P++
Sbjct: 22 LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81
Query: 99 YNTLISAYA--DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCL 154
+NT+I DC D A+ L+ MR F + FT+ ++ A + L L ++H L
Sbjct: 82 WNTMIRGLVSKDCFD--DAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSL 139
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
+ G+DH V SLL+ Y + D+A +VF ++ + K+ VSW +++ Y E
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD-KNVVSWTAIITGYISSGHFRE 198
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
A+ F++++ + L D ++L +L A L D G ++ SG +N + + L+D
Sbjct: 199 AIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLD 258
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y KC G++ +F +P+ D+V W+TMI GY+ QAL F ++ PD
Sbjct: 259 MYVKC-GNLERANLIFSAMPEKDIVSWSTMIQGYAFNG-LPQQALDLFFQMQSENLKPDC 316
Query: 335 CSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ V V+SAC+ L LG +L + E SN + + AL+ MYSKCG++ A +F
Sbjct: 317 YTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV-LGTALIDMYSKCGSVTQAWEIFT 375
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
M + V N+M+ G + +G LF + + I P TF+ +L C H G V E
Sbjct: 376 AMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNE 435
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI--------- 504
G+++F+ MK +F P EHY CM+DLLGRAG L +A +LI MP P ++
Sbjct: 436 GRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGC 495
Query: 505 --------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
A + ++LEP N+ YV L+NIY+ + +WEE IR M+++ +QK
Sbjct: 496 KLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRA 555
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEK 604
SWIE+ +H F+ D SH + ++I+ L+E+ R++K G+VP +KE
Sbjct: 556 CSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEH 615
Query: 605 RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L +HSEKLAVAFGL+++ I V+KNLR+CGDCH+AIK IS I REI +RDT RFH
Sbjct: 616 FLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFH 675
Query: 665 CFKDGRCSCGDYW 677
F DG CSC DYW
Sbjct: 676 TFIDGSCSCRDYW 688
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 203/467 (43%), Gaps = 39/467 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C + D+ G +H+L +K ++ + LY KC A F+
Sbjct: 116 TIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFD-- 173
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
IP ++VS+ +I+ Y G A+ FK
Sbjct: 174 -----------------------------DIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ E D F+L ++ A + + + + G V SLL Y + G
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ A +F M E KD VSW++M+ Y + +AL LF +M S L D YT+ +L
Sbjct: 265 NLERANLIFSAMPE-KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A +L L G+ + + ++ F N +G+ LID+Y+KC G + ++F + + D
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC-GSVTQAWEIFTAMKRKDR 382
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V+WN M+ G S ++ F + + G PD+ +F+ ++ C++ + G+Q
Sbjct: 383 VVWNAMMVGLSM-NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIG 416
++ + I +V + + G L +A +L + MP + N V +++ G H
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
A ++ + ++E P + +V + + + + E +K S MK+
Sbjct: 502 HLAEQVLKKLIELE-PWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 326/544 (59%), Gaps = 34/544 (6%)
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+++N L+ YS+ GF++ A++VF M E + VSWN+M+ Y ++R EAL +F EM
Sbjct: 98 VTLSNVLINAYSKCGFVELARQVFDGMLE-RSLVSWNTMIGLYTRNRMESEALDIFWEMR 156
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ +T++S+L+A + D + + H +K+ N ++G+ L+DLYAKC G +
Sbjct: 157 NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKC-GMI 215
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
D ++VFE + V W++M++GY Q + Y ++AL +++ R+ + + VI A
Sbjct: 216 NDAVQVFESMQDKSSVTWSSMVAGYVQSKNY-EEALLLYRRAQRMSLEQNQFTLSSVICA 274
Query: 344 CSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
CSNL+ + GKQ+HA+ K SN + V ++ V MY+KCG+L ++ +F + E N
Sbjct: 275 CSNLAALIEGKQMHAVIRKSGFGSN-VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIEL 333
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
N++I+G+A+H E + LFE M + + P +TF S+LS C HTG V EG+++F +M+
Sbjct: 334 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 393
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
+G P HYSCM+D+LGRAG L++A LI+++PF P + +A
Sbjct: 394 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELA 453
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
AA +LEP NA +V+L+NIYAA+ +WEE+A R+L+RD V+K G SWI++K +
Sbjct: 454 EVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDK 513
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H+F + SHP I+EI L+ + ++++ GY P KE+ L+ HSEKL
Sbjct: 514 VHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKL 573
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+ FGL+ G + +MKNLRIC DCH +K S R I VRD RFH F DG CSC
Sbjct: 574 ALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSC 633
Query: 674 GDYW 677
G++W
Sbjct: 634 GEFW 637
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 138/310 (44%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D + K LH L +K + + Y+ + LY+KCG ++ A F
Sbjct: 166 TISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESM 225
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q + V+++++++ Y + E AL L++
Sbjct: 226 QDKSS-------------------------------VTWSSMVAGYVQSKNYEEALLLYR 254
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + FTLS +I A SN LI KQ+H + GF V +S + Y++ G
Sbjct: 255 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCG 314
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L E+ +F E+ E E+ WN+++ + +H E + LF++M + + T +S+L
Sbjct: 315 SLRESYIIFSEVQEKNIEL-WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 373
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+ + G +F + + G N S ++D+ + +G + + ++ + IP +P
Sbjct: 374 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR-AGLLSEAYELIKSIPFEP 432
Query: 297 DLVLWNTMIS 306
+W ++++
Sbjct: 433 TASIWGSLLA 442
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 337 FVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
F+ ++ C+ N + K H T+++E++ + ++++N L+ YSKCG +E AR++FD M
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGD-VTLSNVLINAYSKCGFVELARQVFDGM 124
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
E + VS N+MI Y ++ + EAL +F M + T SVLSAC E +
Sbjct: 125 LERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECK 184
Query: 456 KYFSM-MKDMFGFEPEGEHY--SCMIDLLGRAGKLTDAERLIEAM 497
K + MK Y + ++DL + G + DA ++ E+M
Sbjct: 185 KLHCLSMKTSLDLNL----YVGTALLDLYAKCGMINDAVQVFESM 225
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 322/540 (59%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ YS+ GF++ A++VF M E + VSWN+M+ Y ++R EAL +F EM +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLE-RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGF 158
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+T++S+L+A D + + H +K+ N ++G+ L+DLYAKC G ++D +
Sbjct: 159 KFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC-GMIKDAV 217
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VFE + V W++M++GY Q + Y ++AL +++ R+ + + VI ACSNL
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNY-EEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 348 SPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + GKQ+HA+ K SN + V ++ V MY+KCG+L ++ +F + E N N++
Sbjct: 277 AALIEGKQMHAVICKSGFGSN-VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G+A+H E + LFE M + + P +TF S+LS C HTG V EG+++F +M+ +G
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 395
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
P HYSCM+D+LGRAG L++A LI+++PF+P + +A AA
Sbjct: 396 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAA 455
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+LEP NA +V+L+NIYAA+ +WEE+A R+L+RD V+K G SWI++K ++H F
Sbjct: 456 EKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTF 515
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ HP I+EI + L+ + K ++ GY P KE+ L+ HSEKLA+ F
Sbjct: 516 SVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 575
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ P+ +MKNLRIC DCH +K S R I VRD RFH F DG CSCGD+W
Sbjct: 576 GLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D + K LH L +K + + Y+ + LY+KCG + A F
Sbjct: 164 TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q + V+++++++ Y + E AL L++
Sbjct: 224 QDKSS-------------------------------VTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + FTLS +I A SN LI KQ+H + GF V +S + Y++ G
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L E+ +F E+ E E+ WN+++ + +H E + LF++M + + T +S+L
Sbjct: 313 SLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 371
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+ + G +F + + G N S ++D+ + +G + + ++ + IP P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR-AGLLSEAYELIKSIPFDP 430
Query: 297 DLVLWNTMIS 306
+W ++++
Sbjct: 431 TASIWGSLLA 440
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 235/697 (33%), Positives = 367/697 (52%), Gaps = 70/697 (10%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+++HAL + + + ++SN + +YSKCG
Sbjct: 125 LRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG-------------------------- 158
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
+ AR++FD + D VS+N+L+S Y G E + +F MR + F L
Sbjct: 159 -----EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFAL 213
Query: 135 SGLITASSN----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+I S + + + +H I G D + ++++ Y++ G L EA +F +
Sbjct: 214 GSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV 273
Query: 191 GEIKDEVSWNSMVVAYGQHREGL------EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
E + V +N+M+ + + + EAL L+ E+ S + +T +S+L A
Sbjct: 274 QE-PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLA 332
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G Q H +IK F ++ IGS LIDLY SG M D + F P+ D+V W M
Sbjct: 333 GYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFN-SGCMEDGFRCFRSSPKHDIVTWTAM 391
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIE 363
+SG Q E + ++AL F + G PD + V++AC++L+ + G+QI K
Sbjct: 392 VSGCVQNELH-EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG 450
Query: 364 IRSNRISV-NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+R +V N+ V MY++ G+++ A R F M H+ VS +++I+ +AQHG +AL
Sbjct: 451 F--DRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHF 508
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F+ M++ + P ITF+ VL+AC+H G V EG +Y+ M +G P +H +C++DLLG
Sbjct: 509 FDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLG 568
Query: 483 RAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVM 525
RAG+L DAE I F+ + ++ AN ++LEP+++ YV+
Sbjct: 569 RAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L N+Y +G+ + R LM+ RGV+K+PG SWIE+K +H FVA D SHP I+
Sbjct: 629 LYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTK 688
Query: 586 LEEMSRKMKQAGY----VPDKEKRLVH-HSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
LEEM ++++ + +E+ L++ HSEKLAVA G++ PI VMKNLR+C DC
Sbjct: 689 LEEMLSRIEKLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDC 748
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H+ +K IS REI +RD RFH F+DG CSC DYW
Sbjct: 749 HSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 230/446 (51%), Gaps = 16/446 (3%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A++F N LLAAY R AR+L D++P+ + VS+N LI AY+ G +L
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R D D F+ + + A S +L + +H LAI G V+NSL++ YS+ G +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA+RVF ++ E +D+VSWNS+V Y + E +++F M +GL+ + L S++
Sbjct: 161 GEARRVF-DVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKC 219
Query: 241 FTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ D + H +IK+G + + S +ID+YAK G + + +F + +P++
Sbjct: 220 CSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAK-KGALVEAAALFRSVQEPNV 278
Query: 299 VLWNTMISGYSQKE-----EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-- 351
V++NTMI+G+ + E E + +AL + ++ G P + +F V+ AC NL+ L
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRAC-NLAGYLEF 337
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIH IK + + + +AL+ +Y G +ED R F P+H+ V+ +M++G
Sbjct: 338 GKQIHGQVIKYTFQEDDF-IGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCV 396
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q+ + +AL LF L + P T SV++ACA VA + GF+
Sbjct: 397 QNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA-VARAGEQIQCFATKSGFDRFT 455
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + R+G + A R + M
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEM 481
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 161/346 (46%), Gaps = 32/346 (9%)
Query: 5 VLKTCVGRRD--LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
V+K C GR D + +++H +K + +L + I +Y+K G L A F Q
Sbjct: 216 VIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE 275
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
NV FN ++A + R T+I AL+L+ ++
Sbjct: 276 PNVVMFNTMIAGFCRT---------------------ETVIGKEV----ASEALTLYSEV 310
Query: 123 REKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + FT S ++ A + L KQ+H I F + ++L+ Y +G +
Sbjct: 311 QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCM 370
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++ R F + D V+W +MV Q+ +AL LF E + L D++T++S++ A
Sbjct: 371 EDGFRCFRSSPK-HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNA 429
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
SL G Q KSGF + + +G+ + +YA+ SGD+ + F+E+ D+V
Sbjct: 430 CASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYAR-SGDVDAATRRFQEMESHDVVS 488
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
W+ +IS ++Q D AL F ++ P++ +F+ V++ACS+
Sbjct: 489 WSAVISCHAQHGCARD-ALHFFDEMVDAKVVPNEITFLGVLTACSH 533
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 39/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+ C L GK +H +K ++ + I LY GC+ F +
Sbjct: 321 TFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSS 380
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
P+ D+V++ ++S E ALSLF
Sbjct: 381 -------------------------------PKHDIVTWTAMVSGCVQNELHEKALSLFH 409
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ D FT+S ++ A + +L + + Q+ C A GFD + + NS + Y+R+
Sbjct: 410 ESLGAGLKPDLFTISSVMNACA-SLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +D A R F EM E D VSW++++ + QH +AL F EMV ++ + T +
Sbjct: 469 GDVDAATRRFQEM-ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGV 527
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQ 295
LTA + + GL+++ + K G + ++DL + +G + D + I
Sbjct: 528 LTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGR-AGRLADAEAFISNSIFH 586
Query: 296 PDLVLWNTMIS 306
D V+W ++++
Sbjct: 587 ADPVIWRSLLA 597
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 33/291 (11%)
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ N L+A Y + G ARRL D MP N VS N +I Y++ G+ +L
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ ++ + L+AC+ G + G+ ++ + G + ++ + + G++ +A
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAI-LDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 491 ERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
R+ + E + V + L + Y +G EE+ + +MR RG
Sbjct: 164 RRVFDVA------------------EERDDVSWNSLVSGYVRAGAREEMVRVFAMMR-RG 204
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---KEKRLV 607
F+ V K DG+ + + +H + +AG D +
Sbjct: 205 GMGLNSFALGSVIKCCS--GRGDGTMDIAEAVHGCV-------IKAGLDSDVFLVSAMID 255
Query: 608 HHSEKLA-VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
+++K A V L S EP +VM N I G C +A +T+
Sbjct: 256 MYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/675 (34%), Positives = 360/675 (53%), Gaps = 69/675 (10%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESALSLFK 120
F+FN LL+ YAR + A+ LF + P +V++NT++S G A+ +
Sbjct: 201 FAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIY 260
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIY-CGFDHYASVNNSLLTCYSRN 177
DM + DG T + + A S L L +++H + + V ++L+ Y+ +
Sbjct: 261 DMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASH 320
Query: 178 GFLDEAKRVFYEM-GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTL 234
+ A+RVF + G + WN+MV Y Q EAL+LF M + + G+ T+
Sbjct: 321 ERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEA-EAGVVPSETTI 379
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A +L A E G H +++K G N + + L+DLYA+ GDM +F I
Sbjct: 380 AGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARL-GDMEAARWIFAAIE 438
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH------------------PDDCS 336
D+V WNT+I+G + D A +++ + G P++ +
Sbjct: 439 PRDVVSWNTLITGCVVQGHIHD-AFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVT 497
Query: 337 FVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
+ ++ C+ L+ P+ GK+IH ++ + S+ I+V +ALV MY+KCG L +R +FDR+
Sbjct: 498 LMTLLPGCAMLAAPAKGKEIHGYAMRHALDSD-IAVGSALVDMYAKCGCLALSRAVFDRL 556
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEG 454
P+ N ++ N +I Y HG+G EA+ LF+ M+ +N P +TF++ L+AC+H+G V G
Sbjct: 557 PKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRG 616
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFL- 513
+ F MK G +P + ++C +D+LGRAG+L +A +I +M PG + A + FL
Sbjct: 617 MELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSM--EPGEQQVSAWSSFLG 674
Query: 514 -------------------QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
QLEP A YV+L NIY+A+G WE+ + +R MR RGV K+
Sbjct: 675 ACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKE 734
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------K 602
PG SWIE+ +H F+A + +HP +H +++ + +M+ GY PD K
Sbjct: 735 PGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEK 794
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
L +HSEKLA+AFGLL T G I V KNLR+C DCH A KFIS + GREI +RD R
Sbjct: 795 AAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRR 854
Query: 663 FHCFKDGRCSCGDYW 677
FH F DG CSCGDYW
Sbjct: 855 FHHFVDGACSCGDYW 869
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 226/468 (48%), Gaps = 48/468 (10%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL AYAR + +A LF+ +P D V++N+LI+A AL +DM +
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 159
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGF----DHYASVNNSLLTCYSRNGFLD 181
FTL ++ A S+ +L L ++ H A+ GF + +A N+LL+ Y+R G +D
Sbjct: 160 LSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAF--NALLSMYARLGLVD 217
Query: 182 EAKRVFYEMGEIKDE----VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+A+ +F + V+WN+MV Q EA+++ +MV+ + D T AS
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277
Query: 238 LTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEIP 294
L A + LE L G + HA+++K S NS + S L+D+YA G R +VF+ +P
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVAR---RVFDMVP 334
Query: 295 --QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSL 351
L LWN M+ GY+Q ++AL F ++ G P + + V+ AC+
Sbjct: 335 GGHRQLGLWNAMVCGYAQA-GMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFA 393
Query: 352 GKQ-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
GK+ +H +K + N V NAL+ +Y++ G++E AR +F + + VS N++I G
Sbjct: 394 GKEAVHGYVLKRGMADNPF-VQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGC 452
Query: 411 AQHGIGMEALRLFEWML------------------ETNIPPTNITFVSVLSACAHTGKVA 452
G +A +L M E + P N+T +++L CA A
Sbjct: 453 VVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPA 512
Query: 453 EGQKY--FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+G++ ++M + + S ++D+ + G L + + + +P
Sbjct: 513 KGKEIHGYAMRH---ALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP 557
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 21/180 (11%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ YAR + +AR +F I D+VS+NTLI+ G A L ++M+
Sbjct: 410 NPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQ 469
Query: 124 EKRFDTDGFTLSGLITASS-----NNLCLI---------------KQLHCLAIYCGFDHY 163
++ TD T G+ NN+ L+ K++H A+ D
Sbjct: 470 QQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSD 529
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+V ++L+ Y++ G L ++ VF + + ++ ++WN +++AYG H G EA+ LF MV
Sbjct: 530 IAVGSALVDMYAKCGCLALSRAVFDRLPK-RNVITWNVLIMAYGMHGLGDEAIALFDRMV 588
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+V NAL+ Y++CG+L A LF+ MP + V+ NS+IA + AL ML
Sbjct: 97 AVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLE 156
Query: 430 NIPPTNITFVSVLSACAHTG---KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
P ++ T VSVL AC+H ++ F+ +K+ F E ++ ++ + R G
Sbjct: 157 GHPLSSFTLVSVLLACSHLAEDLRLGREAHAFA-LKNGFLDGDERFAFNALLSMYARLGL 215
Query: 487 LTDAERLIEAMPF--NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
+ DA+ L ++ +PG V + + ++ SG+ E +
Sbjct: 216 VDDAQMLFGSVDTTDSPG---------------GGVVTWNTMVSLLVQSGRCGEAIEVIY 260
Query: 545 LMRDRGVQKK--------PGFSWIE---VKKQMHVFVAED 573
M RGV+ P S +E + ++MH +V +D
Sbjct: 261 DMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKD 300
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 42/230 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+ + F++
Sbjct: 497 TLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRL 556
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
NV ++NVL+ AY A LFD++ +P+ V++ ++A + G +
Sbjct: 557 PKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRG 616
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ LF M+ ++ + LH A+
Sbjct: 617 MELFHSMKR-----------------NHGVQPTPDLHACAV---------------DILG 644
Query: 176 RNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHRE----GLEALQLFQ 220
R G LDEA + M + +VS W+S + A HR + A +LFQ
Sbjct: 645 RAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQ 694
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 342/610 (56%), Gaps = 40/610 (6%)
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL-----ITASSNNLCLIKQLHCLAIY 157
++A + C + SL KD R R D + +S + + A +L + K H LAI+
Sbjct: 27 LAARSFCNKLNHSSSL-KDRRLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIH 85
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G N L+ Y++ G D A+ VF ++ ++ VSWN+M+ Y E ++AL+
Sbjct: 86 FGLVTDTLTCNILINLYTKCGRNDCARLVF-DIMHVRSIVSWNTMIAGYTHSGEDVQALK 144
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF M + +TL+S + A + + Q H +K NS +G+ ++D+YA
Sbjct: 145 LFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYA 204
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC+ ++D VFE++P+ LV W+++ +GY Q + ++AL F+ R G + +
Sbjct: 205 KCNM-IKDACWVFEKMPERTLVTWSSLFAGYVQNGLH-EEALHLFRCAQREGVELTEFTL 262
Query: 338 VCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
++SAC++L+ + G Q+HA+ +K N V +LV +Y++CG +E A LF M
Sbjct: 263 SAILSACASLALKIEGIQLHAVILKCGFHGN-FFVAASLVDVYARCGQIEKAYALFAYME 321
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
N V N+MIA +++H EA+ LFE M + I P +T++SVLS C+H G V +G+
Sbjct: 322 HKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRH 381
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
YFS++ EP HYSCM+D+LGR+GK +A L+ MPF P +
Sbjct: 382 YFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNY 441
Query: 504 ----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+A AA QLEP N +V+L+N+YAASG WE V R+ ++D G +K+ G SW
Sbjct: 442 NNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSW 501
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG------------YVPDKEKRLV 607
IE K ++HVFV + HP I +I+N LEE+ +M++ + KE+ L
Sbjct: 502 IEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLK 561
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HHSEKLA++FGL+S PI++ KNLRICGDCH+ +K + I R + VRDT RFH FK
Sbjct: 562 HHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFK 621
Query: 668 DGRCSCGDYW 677
DG CSCGD+W
Sbjct: 622 DGSCSCGDFW 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 223/462 (48%), Gaps = 42/462 (9%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
Q L+ C R+ L+ GKS H L + + N I LY+KCG
Sbjct: 62 QRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCG--------------- 106
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
R AR +FD + +VS+NT+I+ Y G+ AL LF M
Sbjct: 107 ----------------RNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMH 150
Query: 124 EKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ FTLS I A + + KQLH +A+ D + V ++L Y++ +
Sbjct: 151 REGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIK 210
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A VF +M E + V+W+S+ Y Q+ EAL LF+ + L +TL++IL+A
Sbjct: 211 DACWVFEKMPE-RTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSAC 269
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
SL + G+Q HA ++K GFH N + + L+D+YA+C G + +F + ++V+W
Sbjct: 270 ASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARC-GQIEKAYALFAYMEHKNVVIW 328
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
N MI+ +S + +S +A+ F+K+ ++G P++ +++ V+S CS+ + + K H ++
Sbjct: 329 NAMIASFS-RHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSH-AGLVEKGRHYFSLL 386
Query: 362 IEIRSNRISV--NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ R+ +V + +V + + G ++A L ++MP T S+ + G ++ +
Sbjct: 387 MSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRL 446
Query: 420 LRLFE---WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
R+ + LE + ++ +V +A + V +KY
Sbjct: 447 ARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYL 488
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C + G LHA+ LK + +++ + +Y++CG + A+ F
Sbjct: 261 TLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYM 320
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+H NV +N ++A+++R A LF+++ Q P+ V+Y +++S + G E
Sbjct: 321 EHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGR 380
Query: 117 SLFKDMREKR 126
F + R
Sbjct: 381 HYFSLLMSDR 390
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/687 (34%), Positives = 365/687 (53%), Gaps = 75/687 (10%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFD-QIPQPDLVSYNTLISAYADCGDTESALSLF 119
H+ +FS L+A YA S+ +F P ++ +N++I A G ALSL+
Sbjct: 45 HHSVIFSAK-LIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLY 103
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + R D +T +I A + + + K +H + GF + N+L+ Y R
Sbjct: 104 SETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRF 163
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLE----ALQLFQEMVSLQLGLD 230
LD+A++VF EM ++D VSWNS++ Y G E LE +++LF EMV+ Q D
Sbjct: 164 NDLDKARKVFEEM-PLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVN-QFKPD 221
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC----------- 279
+ T+ SIL A L DL G H ++I SG+ ++ + LI++YAKC
Sbjct: 222 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 281
Query: 280 -------------------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
+G M D +KVFE + D++ WNT+I+ E+ + L
Sbjct: 282 GMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSED-CNLGLR 340
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMY 379
++ G PD + + ++ CS L+ GK+IH K+ + S+ + V N L+ MY
Sbjct: 341 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD-VPVGNVLIEMY 399
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
SKCG+L ++ ++F M + V+ ++I+ +G G +A+R F M I P ++ FV
Sbjct: 400 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 459
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+++ AC+H+G V EG YF MK + EP EHY+C++DLL R+ L AE I +MP
Sbjct: 460 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 519
Query: 500 NPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
P S IA + + ++L P + YV+++NIYAA GKW++V +I
Sbjct: 520 KPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSI 579
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-- 600
R+ ++ RG++K PG SW+E++ +++VF +E++ L ++ M + GY+
Sbjct: 580 RKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANL 639
Query: 601 --------DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+ EKR L HSE+LA+AFGLL+T G P+ VMKNLR+C DCH K+IS I
Sbjct: 640 QFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKI 699
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
RE+ VRD RFH FKDG CSCGDYW
Sbjct: 700 VQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 191/422 (45%), Gaps = 30/422 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C DL GK +H + + SN I +Y+KCG L A+ F+
Sbjct: 224 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 283
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S+N ++ Y + ++ + ++F+ + D++++NT+I++ D L +
Sbjct: 284 KCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMIS 343
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI------KQLHCLAIYCGFDHYASVNNSLLTCY 174
MR + D T+ ++ S L+ K++H G + V N L+ Y
Sbjct: 344 RMRTEGVTPDMATMLSILPVCS----LLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 399
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ G L + +VF M + KD V+W +++ A G + EG +A++ F EM + + D
Sbjct: 400 SKCGSLRNSFQVFKLM-KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 458
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEE 292
+I+ A + + GL + H +K + I + ++DL ++ S +
Sbjct: 459 VAIIFACSHSGLVEEGLNYF-HRMKKDYKIEPRIEHYACVVDLLSR-SALLDKAEDFILS 516
Query: 293 IP-QPDLVLWNTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
+P +PD +W ++S S E +++ +LN PDD + ++ SN+
Sbjct: 517 MPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN-----PDDTGYYVLV---SNIYA 568
Query: 350 SLGK--QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+LGK Q+ ++ I+ R + + + + +K + F++ E N L M+
Sbjct: 569 ALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVN--KLLGML 626
Query: 408 AG 409
AG
Sbjct: 627 AG 628
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/651 (35%), Positives = 351/651 (53%), Gaps = 65/651 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F I +P+ +S+NT+I +A D SAL+L+ M + +T L A
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S KQ+H + G V+ SL++ Y++NG +++A +VF
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ IKD VSWN+M+ Y + EAL+LF EM+ + + D
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+A++L+ T ++ G Q H+ + GF N + + LIDLY+KC G+M +FE
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC-GEMERAHGLFE 269
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ + +AL F+++ ++G P+D + + ++ AC++L
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHK-EALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + K++ S+ +L+ MY+KCGN+E A ++FD + + S N+MI G
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG A L M + I P +ITFV +LSAC+H G G+K F M + EP
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEP 448
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDLLGR+G +AE LI +M P + LKA A
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKL 508
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N YV+L+NIYA S +W++VA +R L+ D+G++K PG S IE+ +H F+
Sbjct: 509 MKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP KEI+ LEE+ + + G+V D KE L +HSEKLA+AFGL+
Sbjct: 569 DKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLI 628
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
ST G + ++KNLR+C +CH A K IS I REI RD RFH FKDG C
Sbjct: 629 STKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/660 (35%), Positives = 354/660 (53%), Gaps = 39/660 (5%)
Query: 53 AHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
AH T N + L A YA + A+ +FDQI + +N++I YA
Sbjct: 46 AHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSP 105
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSL 170
AL L+ M D FT ++ A + L + +++H L + G + V NS+
Sbjct: 106 SRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSI 165
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L+ Y + G + EA RV ++ ++D SWN+M+ + ++ E A ++F +M D
Sbjct: 166 LSMYFKFGDV-EAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGD 224
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIK---SGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
TL ++L+A + DL G + H ++++ SG N + + +ID+Y C +
Sbjct: 225 RTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCE-SVSCAR 283
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
K+FE + D+V WN++ISGY +K + QAL F ++ VG PD+ + + V++AC+ +
Sbjct: 284 KLFEGLRVKDVVSWNSLISGY-EKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQI 342
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S LG + + +K N + V AL+ MY+ CG+L A R+FD MPE N + M
Sbjct: 343 SALRLGATVQSYVVKRGYVVN-VVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ G+ HG G EA+ +F ML + P F +VLSAC+H+G V EG++ F M +
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYS 461
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAA 509
EP HYSC++DLLGRAG L +A +IE M P +A+ +A
Sbjct: 462 VEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISA 521
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+L P YV L+NIYAA +WE+V +R L+ R ++K P +S++E+ K +H F
Sbjct: 522 QKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQF 581
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D SH +I+ L++++ ++K+AGY PD KEK L HSE+LA+AF
Sbjct: 582 FVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAF 641
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L++T G I + KNLR+CGDCH IK IS + REI +RD RFH F+DG CSCG YW
Sbjct: 642 ALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 122/230 (53%), Gaps = 5/230 (2%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCM 287
D ++L + T+ + L LQ HAH+ G +N+++ + L YA C G M
Sbjct: 20 FDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVC-GHMPYAQ 78
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN- 346
+F++I + LWN+MI GY+ S +AL + K+ G PD+ ++ V+ AC +
Sbjct: 79 HIFDQIVLKNSFLWNSMIRGYACNNSPS-RALFLYLKMLHFGQKPDNFTYPFVLKACGDL 137
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
L +G+++HAL + + + + V N++++MY K G++E AR +FDRM + S N+M
Sbjct: 138 LLREMGRKVHALVVVGGLEED-VYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTM 196
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
++G+ ++G A +F M T +++LSAC + G++
Sbjct: 197 MSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKE 246
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/754 (33%), Positives = 377/754 (50%), Gaps = 117/754 (15%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQP- 94
L N + LY+K GC A + F++ +V S++ ++A YA A LF ++ +
Sbjct: 208 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 267
Query: 95 ----------------------------------DLVSYNTLISAYADCGDTESALSLFK 120
D+VS+ L+S YA G ++ +F+
Sbjct: 268 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFR 327
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC---GFDHYASVNNSLLTCYSRN 177
+M D + ++ ASS L + +Q CL Y GF+ V SL+ YS+
Sbjct: 328 NMLSDGIQPDAVAVVKILAASSE-LGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKC 386
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLA- 235
G L +A ++F M ++D V W+SM+ AYG H G EAL++F +M+ + G+ Y ++
Sbjct: 387 GSLGDAVKLFKGM-IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISM 445
Query: 236 ----------SILTAFTSLEDLVGGLQFHAH-------------------------LIKS 260
+ T T + V AH +
Sbjct: 446 QPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAY 505
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G +S I + +Y + + VFE+IP P LWN MI G++ + +L
Sbjct: 506 GLQYDSRILTKFAIMYVSFN-RIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFL-SSLE 563
Query: 321 CFKKLNRVGYHPDD-------CSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+ K+ G PD+ S + V+ AC NL G+ H+ I+ + I V
Sbjct: 564 LYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD-ILVA 622
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
A++ MYSKCG+L+ AR LFD + V ++MIA Y HG G +A+ LF+ M++ +
Sbjct: 623 TAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVR 682
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P+++TF VLSAC+H+G + EG+ YF +M + F + +Y+CM+DLLGRAG+L++A
Sbjct: 683 PSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVD 742
Query: 493 LIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
LIE MP P + +A K A+H L+P +A +V+L+NIYAA +
Sbjct: 743 LIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSR 802
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
W EV +R++M RG K GFS +E Q+H F D SHP ++++ LEE++ MK
Sbjct: 803 WNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKH 862
Query: 596 AGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GYVP KE L +HSE+LA+AFGL++TS G + + KNLRICGDCHNA
Sbjct: 863 LGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNA 922
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IK IS I R I VRD +RFH F+DG CSCGDYW
Sbjct: 923 IKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/579 (24%), Positives = 252/579 (43%), Gaps = 124/579 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T LK C G R L GK +H KN + ++ + + LYSKCG + A F +
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164
Query: 60 TQHAN----------------------VFS--------------FNVLLAAYARQLRIAS 83
Q + +FS N LL YA+
Sbjct: 165 FQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKI 224
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A LF ++P+ D++S++T+I+ YA+ AL+LF +M EKRF+ N
Sbjct: 225 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE-------------PN 271
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
++ ++ L A+ SRN L+E K++ +++ KD VSW +++
Sbjct: 272 SVTVVSALQACAV------------------SRN--LEEGKKI-HKIAVWKDVVSWVALL 310
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
Y Q+ +++ +F+ M+S + D + IL A + L L H ++++SGF+
Sbjct: 311 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 370
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
N +G+ LI+LY+KC G + D +K+F+ + D+V+W++MI+ Y +AL F
Sbjct: 371 SNVFVGASLIELYSKC-GSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR-GGEALEIFD 428
Query: 324 KLNRVGYHPDDCSFVCV---------ISACSNLSPSLGKQIHALTIKIEIR--------- 365
++ +V C + + I++C+ L+ + ++ A ++ R
Sbjct: 429 QMIQVMQGITSCYQISMQPQVQPPLAITSCT-LATHIPWKVKAFYMRAHFRWLGHFWEIF 487
Query: 366 ----------------------SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+RI A+ MY ++ A +F+ +P +
Sbjct: 488 PTYPFQAADMSKSNIFAYGLQYDSRILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLW 545
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTN-------ITFVSVLSACAHTGKVAEGQK 456
N MI G+A G + +L L+ M+E + P N ++ +SVL AC + G + +G+
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEW 605
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ S + GFE + + ++D+ + G L A L +
Sbjct: 606 FHSYVIQT-GFEFDILVATAIMDMYSKCGSLDLARCLFD 643
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 206/481 (42%), Gaps = 105/481 (21%)
Query: 3 RQVL----KTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
RQVL + C R + LH+ K + + + LY+KC L AA F+
Sbjct: 4 RQVLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60
Query: 59 QTQHANVFSFNVLLAAYARQ-----------LRIASARQLFDQIPQP------------- 94
+T H NV +N L +Y R+ L I +A + D P
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 95 -----------------DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
D+ + L+ Y+ CG AL +F++ +R DT +T +
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF--QRPDTVLWT--SM 176
Query: 138 ITASSNN------LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+T N L L Q+ + + C FD + NSLL Y++ G A +F +M
Sbjct: 177 VTGYQQNNDPEEALALFSQM--VMMDC-FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 233
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
E KD +SW++M+ Y + EAL LF EM+ + + T+ S L A +L G
Sbjct: 234 E-KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 292
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
+ H + V++ D+V W ++SGY+Q
Sbjct: 293 KIHK-------------------------------IAVWK-----DVVSWVALLSGYAQN 316
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ---IHALTIKIEIRSNR 368
+ +++G F+ + G PD + V +++A S L + +Q +H ++ SN
Sbjct: 317 -GMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL--GIFQQALCLHGYVVRSGFNSN- 372
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V +L+ +YSKCG+L DA +LF M + V +SMIA Y HG G EAL +F+ M++
Sbjct: 373 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432
Query: 429 T 429
Sbjct: 433 V 433
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 45/410 (10%)
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
MR ++ D F + NN + QLH G H L + Y++ L
Sbjct: 1 MRSRQVLVDLFQ-------ACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQ 53
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTA 240
A++VF E + WNS + +Y + ++ E L+LF M+ + D +T+ L A
Sbjct: 54 AARKVFDETPHPNVHL-WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKA 112
Query: 241 FTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
L L G H K+ + +GS L++LY+KC G M + +KVFEE +PD V
Sbjct: 113 CAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC-GQMGEALKVFEEFQRPDTV 171
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI------SACSNLSPSL-- 351
LW +M++GY Q + ++AL F ++ + D V + + C ++ +L
Sbjct: 172 LWTSMVTGYQQNND-PEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFS 230
Query: 352 ---GKQIHALTIKIEIRSNRISVNNAL------------------VAMYSKCG---NLED 387
K + + + I +N + N AL V+ C NLE+
Sbjct: 231 KMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEE 290
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+++ + VS ++++GYAQ+G+ +++ +F ML I P + V +L+A +
Sbjct: 291 GKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSE 350
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + + GF + +I+L + G L DA +L + M
Sbjct: 351 LGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGM 399
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L G+ H+ ++ F ++ + +YSKCG L A F++T +
Sbjct: 590 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 649
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ ++A+Y A LFDQ+ + P V++ ++SA + G E F+
Sbjct: 650 LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 709
Query: 121 DMREK 125
M E+
Sbjct: 710 LMTEE 714
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 235/697 (33%), Positives = 367/697 (52%), Gaps = 70/697 (10%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+++HAL + + + ++SN + +YSKCG
Sbjct: 125 LRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG-------------------------- 158
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
+ AR++FD + D VS+N+L+S Y G E + +F MR + F L
Sbjct: 159 -----EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFAL 213
Query: 135 SGLITASSN----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+I S + + + +H I G D + ++++ Y++ G L EA +F +
Sbjct: 214 GSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV 273
Query: 191 GEIKDEVSWNSMVVAYGQHREGL------EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
E + V +N+M+ + + + EAL L+ E+ S + +T +S+L A
Sbjct: 274 QE-PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLA 332
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G Q H +IK F ++ IGS LIDLY SG M D + F P+ D+V W M
Sbjct: 333 GYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFN-SGCMEDGFRCFRSSPKHDIVTWTAM 391
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIE 363
+SG Q E + ++AL F + G PD + V++AC++L+ + G+QI K
Sbjct: 392 VSGCVQNELH-EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG 450
Query: 364 IRSNRISV-NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+R +V N+ V MY++ G+++ A R F M H+ VS +++I+ +AQHG +AL
Sbjct: 451 F--DRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHF 508
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F+ M++ + P ITF+ VL+AC+H G V EG +Y+ M +G P +H +C++DLLG
Sbjct: 509 FDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLG 568
Query: 483 RAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVM 525
RAG+L DAE I F+ + ++ AN ++LEP+++ YV+
Sbjct: 569 RAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L N+Y +G+ + R LM+ RGV+K+PG SWIE+K +H FVA D SHP I+
Sbjct: 629 LYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTK 688
Query: 586 LEEMSRKMKQAGY----VPDKEKRLVH-HSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
LEEM ++++ + +E+ L++ HSEKLAVA G++ PI VMKNLR+C DC
Sbjct: 689 LEEMLSRIEKLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDC 748
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H+ +K IS REI +RD RFH F+DG CSC DYW
Sbjct: 749 HSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 230/446 (51%), Gaps = 16/446 (3%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A++F N LLAAY R AR+L D++P+ + VS+N LI AY+ G +L
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R D D F+ + + A S +L + +H LAI G V+NSL++ YS+ G +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA+RVF ++ E +D+VSWNS+V Y + E +++F M +GL+ + L S++
Sbjct: 161 GEARRVF-DVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKC 219
Query: 241 FTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ D + H +IK+G + + S +ID+YAK G + + +F + +P++
Sbjct: 220 CSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAK-KGALVEAAALFRSVQEPNV 278
Query: 299 VLWNTMISGYSQKE-----EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-- 351
V++NTMI+G+ + E E + +AL + ++ G P + +F V+ AC NL+ L
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRAC-NLAGYLEF 337
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIH IK + + + +AL+ +Y G +ED R F P+H+ V+ +M++G
Sbjct: 338 GKQIHGQVIKYTFQEDDF-IGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCV 396
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q+ + +AL LF L + P T SV++ACA VA + GF+
Sbjct: 397 QNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA-VARAGEQIQCFATKSGFDRFT 455
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + R+G + A R + M
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEM 481
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 161/346 (46%), Gaps = 32/346 (9%)
Query: 5 VLKTCVGRRD--LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
V+K C GR D + +++H +K + +L + I +Y+K G L A F Q
Sbjct: 216 VIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE 275
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
NV FN ++A + R T+I AL+L+ ++
Sbjct: 276 PNVVMFNTMIAGFCRT---------------------ETVIGKEV----ASEALTLYSEV 310
Query: 123 REKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + FT S ++ A + L KQ+H I F + ++L+ Y +G +
Sbjct: 311 QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCM 370
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++ R F + D V+W +MV Q+ +AL LF E + L D++T++S++ A
Sbjct: 371 EDGFRCFRSSPK-HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNA 429
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
SL G Q KSGF + + +G+ + +YA+ SGD+ + F+E+ D+V
Sbjct: 430 CASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYAR-SGDVDAATRRFQEMESHDVVS 488
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
W+ +IS ++Q D AL F ++ P++ +F+ V++ACS+
Sbjct: 489 WSAVISCHAQHGCARD-ALHFFDEMVDAKVVPNEITFLGVLTACSH 533
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 33/291 (11%)
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ N L+A Y + G ARRL D MP N VS N +I Y++ G+ +L
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ ++ + L+AC+ G + G+ ++ + G + ++ + + G++ +A
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAI-LDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 491 ERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
R+ + E + V + L + Y +G EE+ + +MR RG
Sbjct: 164 RRVFDVA------------------EERDDVSWNSLVSGYVRAGAREEMVRVFAMMR-RG 204
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---KEKRLV 607
F+ V K DG+ + + +H + +AG D +
Sbjct: 205 GMGLNSFALGSVIKCCS--GRGDGTMDIAEAVHGCV-------IKAGLDSDVFLVSAMID 255
Query: 608 HHSEKLA-VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
+++K A V L S EP +VM N I G C +A +T+
Sbjct: 256 MYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/562 (40%), Positives = 319/562 (56%), Gaps = 41/562 (7%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQLH GF + L+ Y L A+ +F + + + WN ++ Y
Sbjct: 95 KQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK-HNIFLWNVLIRGYAW 153
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ A+QL+ +M L D +T +L A +L + G + H H++++G+ ++ +
Sbjct: 154 NGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFV 213
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ LID+YAKC G + +VF++I D VLWN+M++ YSQ + D L ++
Sbjct: 214 GAALIDMYAKC-GCVGSAREVFDKILVRDAVLWNSMLAAYSQNG-HPDACLSLCSEMVLT 271
Query: 329 GYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G P + + V ISA + N + G+++H L+ + E S+ V ALV MY+KCG++
Sbjct: 272 GLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD-KVKTALVDMYAKCGSVRV 330
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
AR LF+R+ VS N+MI GYA HG EAL LFE M P +ITFV VLSAC+H
Sbjct: 331 ARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSH 389
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP------ 501
G + EG +F M + +P +HY+CM+DLLG +G+L +A LI M P
Sbjct: 390 GGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWG 449
Query: 502 --------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
G IAL+ ++LEP +A YV+L+NIYA +GKWE VA +R+LM
Sbjct: 450 ALLNSCKIHANVELGEIALE---RLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMT 506
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
DR ++K SWIEVK ++H F++ D SHP+ EI++ LE + MK+AGY P
Sbjct: 507 DRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFH 566
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+K + HSE+LA+AFGL+ST G +L+ KNLRIC DCH AIKFIS I REI
Sbjct: 567 DVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREI 626
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
TVRD R+H FKDG CSCGDYW
Sbjct: 627 TVRDVNRYHHFKDGVCSCGDYW 648
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L++C+ R+ + GK LHA F ++ + LY C LS+A F++
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N+F +NVL+ YA G E+A+ L+
Sbjct: 138 KHNIFLWNVLIRGYAWN-------------------------------GPYEAAVQLYYQ 166
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + D FT ++ A + L I +++H + G++ V +L+ Y++ G
Sbjct: 167 MFDYGLVPDNFTFPFVLKACA-ALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCG 225
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ VF ++ ++D V WNSM+ AY Q+ L L EMV L TL + +
Sbjct: 226 CVGSAREVFDKI-LVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L G + H + F + + + L+D+YAKC G +R +FE + +
Sbjct: 285 SASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKC-GSVRVARNLFERLGVKRV 343
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
V WN MI+GY+ ++ +AL F+++NRV PD +FV V+SACS+
Sbjct: 344 VSWNAMITGYAM-HGHATEALDLFEEMNRVA-KPDHITFVGVLSACSH 389
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C + G+ +H ++ ++ I +Y+KCGC+ +A F
Sbjct: 178 TFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVF--- 234
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
D+I D V +N++++AY+ G ++ LSL
Sbjct: 235 ----------------------------DKILVRDAVLWNSMLAAYSQNGHPDACLSLCS 266
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M TL I+AS++N L ++LH L+ F+ + V +L+ Y++ G
Sbjct: 267 EMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCG 326
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+ +F +G +K VSWN+M+ Y H EAL LF+EM + D T +L
Sbjct: 327 SVRVARNLFERLG-VKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVL 384
Query: 239 TAFTSLEDLVGGLQFHAHLIK 259
+A + L G F +I+
Sbjct: 385 SACSHGGLLEEGWMFFETMIR 405
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/661 (34%), Positives = 354/661 (53%), Gaps = 73/661 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT---- 139
A +F+ I +P+L+ +NT+ +A D SAL L+ M + +T L+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 140 --ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF---------- 187
AS L Q+H + G++ V+ SL++ Y +N L++A +VF
Sbjct: 76 LKASKEGL----QIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131
Query: 188 --------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++ +KD VSWN+M+ Y + EAL+LF+EM+ +
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D T+ ++++A + G Q H+ + GF N I + LID Y+KC G+M
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKC-GEMETAC 250
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F + D++ WN +I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 251 GLFLGLSYKDVISWNILIGGYTHLNLYK-EALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 348 SP-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+G+ IH + +++ +N S+ +L+ MYSKCG++E A ++F+ M + + N+
Sbjct: 310 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNA 369
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI G+A HG A +F M + I P +ITFV +LSAC+H G + G+ F M +
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNY 429
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KA 508
P+ EHY CMIDLLG +G +AE +I M P G++ L K
Sbjct: 430 KITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKF 489
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A + ++EP+N YV+L+NIYA +G+W EVA IR L+ D+G++K PG S IE+ +H
Sbjct: 490 AQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHE 549
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+A
Sbjct: 550 FIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIA 609
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL+ST + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DY
Sbjct: 610 FGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 669
Query: 677 W 677
W
Sbjct: 670 W 670
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 315/540 (58%), Gaps = 42/540 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N++L+CY RN ++ A+ F +M IKD SWN+M+ + Q+++ +A LF M +
Sbjct: 42 NTMLSCYVRNSNMERAQAFFEDM-PIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTK-- 98
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
++ T ++++ + DL L+ L + ++ + +I Y K G +
Sbjct: 99 --NVVTWNAMISGYVECGDLDSALK----LFEKAPFKSVVAWTAMITGYMKL-GRIGLAE 151
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
++FE++P+ +LV WN MI+GY + D + F+ + G P+ + + CS L
Sbjct: 152 RLFEKMPEKNLVTWNAMIAGYIENHRAED-GVKLFRTMVGFGIQPNSSTLSSALLGCSEL 210
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S LG+Q+H L K + + + +L++MY KCG LED +LF ++P + V+ N+M
Sbjct: 211 SALQLGRQVHQLVCKSPL-CDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAM 269
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+GYAQHG G +AL LF+ M+E + P ITFV+VL AC H G G KYF M +G
Sbjct: 270 ISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYG 329
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
+ +HY+CM+DLLGRAGKL +A LIE MPF P + +A A+
Sbjct: 330 LVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFAS 389
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
L L+P++A YV LAN+YAA+ +W+ VA +R+ M+ V K PG+SWIEVK H F
Sbjct: 390 QKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQF 449
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ D HP + IH L+E+ +KMK AGYVPD KE+ L+ HSEKLA+A+
Sbjct: 450 RSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAY 509
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ G PI V KNLR+CGDCH AIK+IS I REI VRDT RFH FKDG CSC DYW
Sbjct: 510 GLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 186/375 (49%), Gaps = 16/375 (4%)
Query: 24 LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIAS 83
+ LK V +++ L+ + K G L A F + + S+N +L+ Y R +
Sbjct: 1 MTLKTTVTWNSVLAG----MSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMER 56
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A+ F+ +P D S+NT+I+ +A + A LF M K T +SG +
Sbjct: 57 AQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDL 116
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+ L +L A + + +++T Y + G + A+R+F +M E K+ V+WN+M+
Sbjct: 117 DSAL--KLFEKAPFKSVVAW----TAMITGYMKLGRIGLAERLFEKMPE-KNLVTWNAMI 169
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
Y ++ + ++LF+ MV + + TL+S L + L L G Q H + KS
Sbjct: 170 AGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLC 229
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
++ G+ LI +Y KC G + D K+F ++P+ D+V WN MISGY+Q E +ALG F
Sbjct: 230 DDTTAGTSLISMYCKC-GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGE-GKKALGLFD 287
Query: 324 KLNRVGYHPDDCSFVCVISACSNLS-PSLG-KQIHALTIKIEIRSNRISVNNALVAMYSK 381
++ G PD +FV V+ AC++ LG K H++ + + + +V + +
Sbjct: 288 EMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVA-KPDHYTCMVDLLGR 346
Query: 382 CGNLEDARRLFDRMP 396
G L +A L ++MP
Sbjct: 347 AGKLVEAVDLIEKMP 361
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 24/317 (7%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ 86
KN+V ++A +S Y +CG L +A F + +V ++ ++ Y + RI A +
Sbjct: 98 KNVVTWNAMISG-----YVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAER 152
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NN 144
LF+++P+ +LV++N +I+ Y + E + LF+ M + TLS + S +
Sbjct: 153 LFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSA 212
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
L L +Q+H L + SL++ Y + G L++ ++F ++ +D V+WN+M+
Sbjct: 213 LQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR-RDVVTWNAMIS 271
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA-----FTSLEDLVGGLQFHAHLIK 259
Y QH EG +AL LF EM+ + D T ++L A FT L G FH+
Sbjct: 272 GYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDL----GVKYFHSMAKD 327
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG-----YSQKEE 313
G + ++DL + +G + + + + E++P +P ++ T++ ++ E
Sbjct: 328 YGLVAKPDHYTCMVDLLGR-AGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAE 386
Query: 314 YSDQALGCFKKLNRVGY 330
++ Q L + GY
Sbjct: 387 FASQKLLNLDPASATGY 403
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
S + +S GK A + ++I N +++ Y + N+E A+ F+ MP +T
Sbjct: 11 SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTP 70
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF--S 459
S N+MI G+AQ+ +A LF M N+ +T+ +++S G + K F +
Sbjct: 71 SWNTMITGFAQNQQMDKARDLFLIMPTKNV----VTWNAMISGYVECGDLDSALKLFEKA 126
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
K + ++ MI + G++ AERL E MP
Sbjct: 127 PFKSVVA-------WTAMITGYMKLGRIGLAERLFEKMP 158
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 28/200 (14%)
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
++ N+ L M K G L++A+ LF ++PE + VS N+M++ Y ++ A FE M
Sbjct: 7 VTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPI 66
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE--HYSCMIDLLGRAGK 486
+ P N A+ Q+ +D+F P ++ MI G
Sbjct: 67 KDTPSWNTMITG----------FAQNQQ-MDKARDLFLIMPTKNVVTWNAMISGYVECGD 115
Query: 487 LTDAERLIEAMPFNP--------------GSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
L A +L E PF G I L A F ++ N V + + Y
Sbjct: 116 LDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGL-AERLFEKMPEKNLVTWNAMIAGYIE 174
Query: 533 SGKWEEVATIRRLMRDRGVQ 552
+ + E+ + R M G+Q
Sbjct: 175 NHRAEDGVKLFRTMVGFGIQ 194
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 13/155 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C L G+ +H L K+ + I +Y KCG L F Q
Sbjct: 199 TLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQV 258
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+V ++N +++ YA+ A LFD++ + PD +++ ++ A G T+ +
Sbjct: 259 PRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGV 318
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL 151
F M + GL+ + C++ L
Sbjct: 319 KYFHSMAKDY---------GLVAKPDHYTCMVDLL 344
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/643 (36%), Positives = 346/643 (53%), Gaps = 78/643 (12%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AYA +ASAR++FD+IP+ +++ N +I +Y + G + +F M D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S + + +++H A G V N L++ Y + GFL EA+ V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLED 246
EM +D VSWNS+VV Y Q++ +AL++ +EM S+++ D T+AS+L A T+ E+
Sbjct: 200 EMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ +Y K DM F ++ + LV WN MI
Sbjct: 259 V---------------------------MYVK---DM------FFKMGKKSLVSWNVMIG 282
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y K +A+ + ++ G+ PD S V+ AC + S SLGK+IH + ++
Sbjct: 283 VY-MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + NAL+ MY+KCG LE AR +F+ M + VS +MI+ Y G G +A+ LF
Sbjct: 342 PNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
+ ++ + P +I FV+ L+AC+H G + EG+ F +M D + P EH +CM+DLLGRAG
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
K+ +A R I+ M P I L AA+ QL P + YV+L+N
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G+WEEV IR +M+ +G++K PG S +EV + +H F+ D SHP EI+ L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE-----PILVM 631
+ +KMK+ GYVP DKE L HSEKLA+ F L++T E I +
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
KNLRICGDCH A K IS I REI +RDT RFH F+ G CSC
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
++ L +L + + L H+ +I NS +G L+ YA D+ KVF
Sbjct: 42 VFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLK-DVASARKVF 97
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSP 349
+EIP+ ++++ N MI Y Y + + F + PD +F CV+ ACS + +
Sbjct: 98 DEIPERNVIIINVMIRSYVNNGFYG-EGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G++IH K+ + S+ + V N LV+MY KCG L +AR + D M + VS NS++ G
Sbjct: 157 VIGRKIHGSATKVGL-SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YAQ+ +AL + M I T S+L A ++T E Y +KDMF F+
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMY---VKDMF-FKM 269
Query: 470 EGE---HYSCMIDLLGRAGKLTDAERL---IEAMPFNPGSIALKAA------NHFLQL-- 515
+ ++ MI + + +A L +EA F P ++++ + L L
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 516 ------EPSNAVPYVMLAN----IYAASGKWEEVATIRRLMRDRGV 551
E +P ++L N +YA G E+ + M+ R V
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 40/279 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C +V G+ +H K + + ++ N + +Y KCG LS A ++
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N L+ YA+ R A
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--S 141
+ +F ++ + LVS+N +I Y A+ L+ M F+ D +++ ++ A
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L L K++H + N+L+ Y++ G L++A+ VF M +D VSW +
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVVSWTA 380
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
M+ AYG G +A+ LF ++ L D + L A
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 42/229 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL C L GK +H + K L+P + L N I +Y+KCGCL A F
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESA 115
+ +V S+ +++AY R A LF ++ PD +++ T ++A + G E
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
S FK M TD + ++ ++ L C+ G
Sbjct: 430 RSCFKLM------TDHYKITP----------RLEHLACMVDLLG---------------- 457
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG----LEALQLFQ 220
R G + EA R +M +E W +++ A H + L A +LFQ
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 325/566 (57%), Gaps = 40/566 (7%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQ+H + GFD V NS++ YS+ G + EA RVF + +++ +SWN+M+ Y
Sbjct: 24 KQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL-PVRNVISWNAMIAGYTN 82
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH--QNS 266
R G EAL LF+EM D YT +S L A + + G+Q HA LI+ GF S
Sbjct: 83 ERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQS 142
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ L+DLY KC M + KVF+ I + ++ W+T+I GY+Q E+ +A+ F++L
Sbjct: 143 AVAGALVDLYVKCR-RMAEARKVFDRIEEKSVMSWSTLILGYAQ-EDNLKEAMDLFRELR 200
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
+ D +I ++ + GKQ+HA TIK+ +SV N+++ MY KCG
Sbjct: 201 ESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLT 260
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+A LF M E N VS MI GY +HGIG +A+ LF M E I P ++T+++VLSAC
Sbjct: 261 VEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSAC 320
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---- 501
+H+G + EG+KYFS++ +P+ EHY+CM+DLLGR G+L +A+ LIE MP P
Sbjct: 321 SHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGI 380
Query: 502 -----------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
G + + + L+ E +N YVM++N+YA +G W+E IR ++
Sbjct: 381 WQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKR 440
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA-GYV-------- 599
+G++K+ G SW+E+ K++H+F DG HP+I+EIH L+EM +++K+ GYV
Sbjct: 441 KGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLH 500
Query: 600 ----PDKEKRLVHHSEKLAVAFGLLSTSY---GEPIL-VMKNLRICGDCHNAIKFISAIA 651
K + L HSEKLA+ L+ GE ++ + KNLR+CGDCH IK +S +
Sbjct: 501 DVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVL 560
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F++G CSCGDYW
Sbjct: 561 KIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 132/252 (52%), Gaps = 29/252 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + R+A AR++FD+I + ++S++TLI YA + + A+ LF+++RE R D
Sbjct: 148 LVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMD 207
Query: 131 GFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYA-SVNNSLLTCYSRNGFLDEAKRVF 187
GF LS +I ++ L KQ+H I + SV NS+L Y + G EA +F
Sbjct: 208 GFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALF 267
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
EM E ++ VSW M+ YG+H G +A++LF EM + D T ++L+A +
Sbjct: 268 REMLE-RNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACS----- 321
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSG------------LIDLYAKCSGDMRDCMKVFEEIP- 294
H+ LIK G S + S ++DL + G +++ + E++P
Sbjct: 322 ------HSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGR-GGRLKEAKNLIEKMPL 374
Query: 295 QPDLVLWNTMIS 306
+P++ +W T++S
Sbjct: 375 KPNVGIWQTLLS 386
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 6/267 (2%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L IL + L G Q H + K GF +G+ +ID+Y+KC G + + +VF +
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKC-GMVGEAARVFNTL 65
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
P +++ WN MI+GY+ E ++AL F+++ G PD ++ + ACS + G
Sbjct: 66 PVRNVISWNAMIAGYTN-ERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEG 124
Query: 353 KQIHALTIKIEIRS-NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
QIHA I+ + +V ALV +Y KC + +AR++FDR+ E + +S +++I GYA
Sbjct: 125 MQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYA 184
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPE 470
Q EA+ LF + E+ S++ A + +G++ + +K +G E
Sbjct: 185 QEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LE 243
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++D+ + G +A+ L M
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREM 270
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 15 LVTGKSLHALYLKNLVPFSAY---LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVL 71
L GK +HA +K VP+ ++N + +Y KCG A F + NV S+ V+
Sbjct: 224 LEQGKQMHAYTIK--VPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVM 281
Query: 72 LAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCG 110
+ Y + A +LF+++ +PD V+Y ++SA + G
Sbjct: 282 ITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSG 324
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/649 (34%), Positives = 361/649 (55%), Gaps = 37/649 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++NV + N L+ Y+ R A +F + + D++S+N++++ YA G+ AL L
Sbjct: 264 NSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLAT 323
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M R + T + + A S+ K LH L I+ G V N+L+T Y+++G
Sbjct: 324 MFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGL 383
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ EAK+VF M + +D V+WN+++ + E EAL+ F+ M + ++ T++++L
Sbjct: 384 MIEAKKVFQTMPK-RDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLG 442
Query: 240 AFTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + DL+ G+ HA +I +GF + ++ + LI +YAKC GD+ +F+ + +
Sbjct: 443 ACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKC-GDLNSSNNIFDRLTSKNA 501
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV-CVISACSNLSPSLGKQIHA 357
+ + + ++AL ++ R G + D+ SF C+ +A G+Q+H
Sbjct: 502 SA-WNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHG 560
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K+ SN V +A + MY KCG ++D R+ R + +S N + + +++HG
Sbjct: 561 LAVKLGCDSNPF-VASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFE 619
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+A F M+ + P ++TFVS+LSAC+H G V EG Y+ M FG + H C+
Sbjct: 620 KAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCI 679
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNA 520
IDLLGR+G+ +AE I+ MP +P G++ L KA + L+L+PS+
Sbjct: 680 IDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDD 739
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+ +NI A +GKWE+V IRR M ++KKP SW+++K ++ +F D SHP
Sbjct: 740 SAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQAS 799
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ LEE+ + +K+AGY+PD KE L +HSE+LA+A+GL+S+ G +
Sbjct: 800 EIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTL 859
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+CGDCH+ KF S I GR+I +RD YRFH F G+CSC DYW
Sbjct: 860 KIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 226/452 (50%), Gaps = 14/452 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H NV N L++ + + A +F + + D +S+N++I+AY G +
Sbjct: 156 HVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKE 215
Query: 115 ALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
+L F M + + TLS ++ S +NL + +H L + G++ +N+L+T
Sbjct: 216 SLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLIT 275
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS G ++A+ VF M E KD +SWNSM+ Y Q L+AL+L M ++ G +
Sbjct: 276 MYSDAGRCEDAELVFQGMVE-KDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYV 334
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T S L A + E G HA +I G H+N +G+ L+ LYAK SG M + KVF+
Sbjct: 335 TFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAK-SGLMIEAKKVFQT 393
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-- 350
+P+ D V WN +I G++ EE D+AL FK + G + + V+ AC L+P+
Sbjct: 394 MPKRDGVTWNALIGGHADSEE-PDEALKAFKLMREEGVPINYITISNVLGAC--LAPNDL 450
Query: 351 --LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G IHA I +S+ V N+L+ MY+KCG+L + +FDR+ N + N+M+A
Sbjct: 451 LEHGMPIHAFIILTGFQSDEY-VQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMA 509
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
A HG EAL+ M + +F L+A A + EGQ+ + + G +
Sbjct: 510 ANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKL-GCD 568
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
S +D+ G+ G++ D R+I P N
Sbjct: 569 SNPFVASATMDMYGKCGEIDDVLRII-PRPIN 599
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 225/438 (51%), Gaps = 7/438 (1%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++VF L+ Y A A ++F ++ ++VS+ L+ AY D G+ +++++ M
Sbjct: 63 SDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRM 122
Query: 123 REKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R + + T+S +I+ S N L Q+ I G + SV NSL++ + G +
Sbjct: 123 RSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSV 182
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+EA VF M E D +SWNSM+ AY ++ E+L+ F M + ++ TL+++L
Sbjct: 183 EEACYVFSGMDE-HDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
S+++L G H+ ++K G++ N + LI +Y+ +G D VF+ + + D++
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSD-AGRCEDAELVFQGMVEKDMIS 300
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WN+M++ Y+Q D AL + + + +F ++ACS+ + GK +HAL
Sbjct: 301 WNSMMACYAQDGNCLD-ALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I + + N I V NALV +Y+K G + +A+++F MP+ + V+ N++I G+A EA
Sbjct: 360 IHVGLHENVI-VGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEA 418
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L+ F+ M E +P IT +VL AC + E + GF+ + + +I
Sbjct: 419 LKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLIT 478
Query: 480 LLGRAGKLTDAERLIEAM 497
+ + G L + + + +
Sbjct: 479 MYAKCGDLNSSNNIFDRL 496
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 214/453 (47%), Gaps = 27/453 (5%)
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCG 159
+S + G ++ F +MR+ G ++ L+TA + ++ Q+H + G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
V SL+ Y G +A +VF EM K+ VSW +++VAY + E + ++
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEM-IYKNVVSWTALMVAYVDYGEPSMVMNIY 119
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+ M S + + T++S+++ SLE+ + G Q H+IK G N + + LI ++
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + + VF + + D + WN+MI+ Y + ++L CF + RV + +
Sbjct: 180 -GSVEEACYVFSGMDEHDTISWNSMIAAY-IRNGLCKESLRCFSWMFRVHKEINSTTLST 237
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+++ C ++ G+ IH+L +K SN + +N L+ MYS G EDA +F M E
Sbjct: 238 MLAGCGSVDNLKWGRGIHSLVLKFGWNSN-VCASNTLITMYSDAGRCEDAELVFQGMVEK 296
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ +S NSM+A YAQ G ++AL+L M +TF S L+AC+ EG+
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILH 356
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+++ + G + ++ L ++G + +A+++ + MP G
Sbjct: 357 ALVIHV-GLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDG---------------- 399
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
V + L +A S + +E +LMR+ GV
Sbjct: 400 --VTWNALIGGHADSEEPDEALKAFKLMREEGV 430
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 164/376 (43%), Gaps = 48/376 (12%)
Query: 1 TFRQVLKTCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C+ DL+ G +HA + Y+ N I +Y+KCG L+
Sbjct: 436 TISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLN-------- 487
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
S+ +FD++ + ++N +++A A G E AL
Sbjct: 488 -----------------------SSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFL 524
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+MR + D F+ S + A++ L +QLH LA+ G D V ++ + Y +
Sbjct: 525 LEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKC 584
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +D+ R+ + +SWN + ++ +H +A + F EM++L + D T S+
Sbjct: 585 GEIDDVLRIIPRPIN-RSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSL 643
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS--GLIDLYAKCSGDMRDCMKVFEEIP- 294
L+A + + GL ++ +IK F + IG +IDL + SG + +E+P
Sbjct: 644 LSACSHGGMVEEGLAYYDSMIKE-FGIPAKIGHCVCIIDLLGR-SGRFAEAETFIKEMPV 701
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP-DDCSFVCVISACSNLSPSLGK 353
P +W ++++ + + + LG N + P DD ++V SN+ + GK
Sbjct: 702 SPTDHVWRSLLAAC---KTHGNLELGRKAVENLLKLDPSDDSAYVLY----SNICATTGK 754
Query: 354 QIHALTIKIEIRSNRI 369
I+ ++ N+I
Sbjct: 755 WEDVEKIRRQMGLNKI 770
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 365/657 (55%), Gaps = 52/657 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ + N L+ Y + A ++FD +P+ ++VS++ L+S + GD + +LSLF +M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 124 EKRFDTDGFTLS------GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + FT S GL+ A L Q+H + GF+ V NSL+ YS+
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGL----QIHGFCLKIGFEMMVEVGNSLVDMYSKC 526
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM--VSLQLGLDMYTLA 235
G ++EA++VF + + + +SWN+M+ + G +AL F M +++ D +TL
Sbjct: 527 GRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 585
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A +S + G Q H L++SGFH ++ I L+DLY KC G + K F++I
Sbjct: 586 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC-GYLFSARKAFDQI 644
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ ++ W+++I GY+Q+ E+ +A+G FK+L + D + +I ++ + G
Sbjct: 645 KEKTMISWSSLILGYAQEGEFV-EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 703
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
KQ+ AL +K+ SV N++V MY KCG +++A + F M + +S +I GY +
Sbjct: 704 KQMQALAVKLP-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 762
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG+G +++R+F ML NI P + +++VLSAC+H+G + EG++ FS + + G +P E
Sbjct: 763 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 822
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQL 515
HY+C++DLLGRAG+L +A+ LI+ MP P G I L + L++
Sbjct: 823 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 882
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ N YVM++N+Y +G W E R L +G++K+ G SW+E+++++H F + + S
Sbjct: 883 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 942
Query: 576 HPMIKEIHNYLEEMSRKMKQA-GYV------------PDKEKRLVHHSEKLAVAFGLLS- 621
HP+ I L+E R++++ GYV KE+ L HSEKLA+ L +
Sbjct: 943 HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 1002
Query: 622 --TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
G+ I V KNLR+C DCH IK +S I VRD RFH F+DG CSCGDY
Sbjct: 1003 GLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLV--PFSAYLSNHFILLYSKCGCLSAAHHAFN 58
T +LK C + GK +H +++ P SA ++ + LY KCG L +A AF+
Sbjct: 583 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 642
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q + + S++ L+ YA++ G+ A+ L
Sbjct: 643 QIKEKTMISWSSLILGYAQE-------------------------------GEFVEAMGL 671
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK ++E D F LS +I ++ L KQ+ LA+ SV NS++ Y +
Sbjct: 672 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 731
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +DEA++ F EM ++KD +SW ++ YG+H G +++++F EM+ + D +
Sbjct: 732 CGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 790
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G + + L+++ G + ++DL + +G +++ + + +P
Sbjct: 791 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR-AGRLKEAKHLIDTMPI 849
Query: 295 QPDLVLWNTMIS 306
+P++ +W T++S
Sbjct: 850 KPNVGIWQTLLS 861
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 232/708 (32%), Positives = 363/708 (51%), Gaps = 69/708 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPF-SAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+F +L C L G+ +H+L L + + ++ + +Y KCG +S A F +
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKE 498
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+P LV++N ++ AYA ++ A
Sbjct: 499 MP-----------------------------LPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFD---HYASVNNSLLTCYSR 176
+M + D + + ++++ C Q + C + A + +L++ + R
Sbjct: 530 MEMLQGGVLPDALSFTSVLSS-----CYCSQEAQVLRMCILESGYRSACLETALISMHGR 584
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
L++A+ VF EM D VSW +MV A ++R+ E LF+ M + D +TLA+
Sbjct: 585 CRELEQARSVFNEMDH-GDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLAT 643
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L + L G HA + + G + + + L+++Y+ C GD R+ + FE +
Sbjct: 644 TLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNC-GDWREALSFFETMKAR 702
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQI 355
DLV WN M + Y+Q + +A+ F+++ G PD +F ++ + S GK
Sbjct: 703 DLVSWNIMSAAYAQAG-LAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLF 761
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HAL + + S+ +SV LV +Y+KCG L++A LF + V LN++I AQHG
Sbjct: 762 HALAAESGLDSD-VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGF 820
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA+++F M + + P T VS++SAC H G V EG F MK+ FG P EHY+
Sbjct: 821 SEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYA 880
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS 518
C +DLLGRAG+L AE++I MPF ++ + A L+L+P
Sbjct: 881 CFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPH 940
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N+ +V+L+NIY A+GKW++ R+ M D V+ PG SW E+ KQ+H FVA D SHP
Sbjct: 941 NSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPK 1000
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD---------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI+ L+++ M++AGY D KEK L +HSE++A+AFGL++T +
Sbjct: 1001 TDEIYVVLDKLELLMRRAGYEADKGLDVEDELKEKALGYHSERIAIAFGLIATPPETTLK 1060
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
++KNLR+CGDCH A K+IS + GREI VRD+ RFH F +G CSC D W
Sbjct: 1061 IVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 243/517 (47%), Gaps = 52/517 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L++CV DL GK H L + +L N I +Y +CG L AH F++ +
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV S + LISA A CG A +LF+
Sbjct: 88 ERNVVS-------------------------------WTALISANAQCGAFARAFALFRT 116
Query: 122 M-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS----VNNSLLTCY 174
M E + +TL ++ A +N +L + + +H + G + ++ V N+++ Y
Sbjct: 117 MLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMY 176
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYT 233
++ G L++A VF + E KD VSW +M AY Q R +AL++F+EM+ L ++ T
Sbjct: 177 AKCGSLEDAIAVFLAIPE-KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVIT 235
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ L A TSL D G H+ L ++ + + LI++Y KC GD VF+ +
Sbjct: 236 FITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKC-GDWEGAYSVFKAM 291
Query: 294 P---QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+ DLV WN MIS + + D A+ F++L G P+ + + +++A +
Sbjct: 292 ASRQELDLVSWNAMISASVEAGRHGD-AMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350
Query: 351 LG--KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMI 407
G + H + + + + NA+++MY+KCG A +F R+ + + +S N+M+
Sbjct: 351 FGAARGFHGRIWESGYLRD-VVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML 409
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+ + F ML I P ++F+++L+AC+++ + G+K S++
Sbjct: 410 GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRD 469
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
E + ++ + G+ G +++AE + + MP S+
Sbjct: 470 YVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSL 506
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 156/668 (23%), Positives = 277/668 (41%), Gaps = 121/668 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA----LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T +L C RDL G+S+HA L L+ + + N I +Y+KCG L A
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188
Query: 57 FNQTQHANVFSFNVLLAAYARQLR-----IASARQLFDQIPQPDLVSY------------ 99
F +V S+ + AYA++ R + R++ Q P+++++
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD 248
Query: 100 --------------------NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
N LI+ Y CGD E A S+FK M ++ + D + + +I+
Sbjct: 249 GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQ-ELDLVSWNAMIS 307
Query: 140 AS----------------------SNNLCLIKQLHCLAIYCGFDHYAS------------ 165
AS N++ LI L+ LA G D A+
Sbjct: 308 ASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA-SGVDFGAARGFHGRIWESGY 366
Query: 166 -----VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
+ N++++ Y++ GF A VF + D +SWN+M+ A + + + F
Sbjct: 367 LRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFH 426
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH-LIKSGFHQNSHIGSGLIDLYAKC 279
M+ + + + +IL A ++ E L G + H+ L + + S + + L+ +Y KC
Sbjct: 427 HMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKC 486
Query: 280 SGDMRDCMKVFEEIPQP--DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
G + + VF+E+P P LV WN M+ Y+Q + S +A G ++ + G PD SF
Sbjct: 487 -GSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDR-SKEAFGALMEMLQGGVLPDALSF 544
Query: 338 VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
V+S+C S Q+ + I +E + AL++M+ +C LE AR +F+ M
Sbjct: 545 TSVLSSC---YCSQEAQVLRMCI-LESGYRSACLETALISMHGRCRELEQARSVFNEMDH 600
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS +M++ A++ E LF M + P T + L C + + G+
Sbjct: 601 GDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVI 660
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEP 517
+ + ++ G E + + ++++ G +A E M +
Sbjct: 661 HACVTEI-GLEADIAVENALLNMYSNCGDWREALSFFETM------------------KA 701
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP-----------GFSWIEVKKQM 566
+ V + +++ YA +G +E + R M+ GV+ G + + K
Sbjct: 702 RDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLF 761
Query: 567 HVFVAEDG 574
H AE G
Sbjct: 762 HALAAESG 769
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 34/339 (10%)
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
V + D+ ++L + DL G H + +G Q+ +G+ LI++Y +C G
Sbjct: 17 VRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRC-GS 75
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK-LNRVGYHPDDCSFVCVI 341
+ + +F ++ + ++V W +IS +Q ++ +A F+ L P+ + V ++
Sbjct: 76 LEEAHAIFSKMEERNVVSWTALISANAQCGAFA-RAFALFRTMLLESSAAPNSYTLVAML 134
Query: 342 SACSNLSP-SLGKQIHALTIKIEIRSNRIS---VNNALVAMYSKCGNLEDARRLFDRMPE 397
+AC+N ++G+ IHA+ ++ + + V NA++ MY+KCG+LEDA +F +PE
Sbjct: 135 NACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPE 194
Query: 398 HNTVSLNSMIAGYAQH-GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ VS +M YAQ +ALR+F ML + P ITF++ L AC + +G
Sbjct: 195 KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTW 251
Query: 457 YFSMMKDM-FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG----------SIA 505
S++ + GF+P + +I++ G+ G A + +AM S +
Sbjct: 252 LHSLLHEASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISAS 309
Query: 506 LKAANH--------FLQLEP--SNAVPYVMLANIYAASG 534
++A H L+LE N+V + + N AASG
Sbjct: 310 VEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASG 348
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 361/674 (53%), Gaps = 48/674 (7%)
Query: 49 CLSAAH-HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
C A H HA + A++F LL Y + + A +F +P DLV++N +++ YA
Sbjct: 28 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 87
Query: 108 DCGDTESALS--LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY-CGFDH 162
G A++ L M+ R + TL L+ A L +H I C +
Sbjct: 88 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPN 147
Query: 163 YAS---------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
S + +LL Y++ G L A+RVF M ++EV+W++++ +
Sbjct: 148 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEVTWSALIGGFVLCSRMT 206
Query: 214 EALQLFQEMVSLQLG-LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
+A LF+ M++ L L ++AS L A SL+ L G Q HA L KSG H + G+ L
Sbjct: 207 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 266
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+ +YAK +G + + +F+E+ D V ++ ++SGY Q +++A FKK+ P
Sbjct: 267 LSMYAK-AGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEP 324
Query: 333 DDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + V +I ACS+L+ + ++ I ++ S+ NAL+ MY+KCG ++ +R++F
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+ MP + VS N+MIAGY HG+G EA LF M PP +TF+ +LSAC+H+G V
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---------- 502
EG+ +F +M +G P EHY CM+DLL R G L +A I++MP
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
Query: 503 -------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+ K + +L P +V+L+NIY+A+G+++E A +R + + +G +K P
Sbjct: 505 CRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSP 564
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------ 603
G SWIE+ +H FV D SHP EI+ L+ + +K+ GY PD
Sbjct: 565 GCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKE 624
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
K L+ HSEKLA+A+G+LS S + I V KNLR+CGDCH IK IS + R I VRD RF
Sbjct: 625 KALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRF 684
Query: 664 HCFKDGRCSCGDYW 677
H FK+G+CSCGD+W
Sbjct: 685 HHFKNGQCSCGDFW 698
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 40/347 (11%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M+ ++ + YT L A ++L D G H H I +G + + + L+D+Y KC+
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA---LGCFKKLNRVGYHPDDCSFV 338
+ D +F +P DLV WN M++GY+ Y L +++R+ P+ + V
Sbjct: 61 -LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRL--RPNASTLV 117
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNR---------ISVNNALVAMYSKCGNLEDA 388
++ + + G +HA I+ + NR + + AL+ MY+KCG+L A
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSAC 445
RR+FD MP N V+ +++I G+ +A LF+ ML + PT+I S L AC
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRAC 235
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA 505
A + G++ +++ G + + ++ + +AG + A IA
Sbjct: 236 ASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQA-------------IA 281
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
L F ++ + V Y L + Y +G+ EE + + M+ V+
Sbjct: 282 L-----FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 149/343 (43%), Gaps = 64/343 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ L+ C L G+ LHAL K+ V
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGV------------------------------ 256
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
HA++ + N LL+ YA+ I A LFD++ D VSY+ L+S Y G E A +FK
Sbjct: 257 -HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D T+ LI A S+ L + H I G S+ N+L+ Y++ G
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D +++VF M +D VSWN+M+ YG H G EA LF EM +L D T +L
Sbjct: 376 RIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 434
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------------LIDLYAKCSGDMRDC 286
+A + H+ L+ G H +G G ++DL ++ G + +
Sbjct: 435 SACS-----------HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR-GGFLDEA 482
Query: 287 MKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ + +P + D+ +W ++ Y + LG KK++R+
Sbjct: 483 YEFIQSMPLRADVRVWVALLGAC---RVYKNIDLG--KKVSRM 520
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 343/616 (55%), Gaps = 36/616 (5%)
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLH 152
+L+ +I+ Y + AL LFK M + D ++ A S L + +H
Sbjct: 267 ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIH 326
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
FD + + N+L+ Y + G L+EA VF M + +D +SWN+++ A+GQH +
Sbjct: 327 GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM-QHRDVISWNTIIAAHGQHSQH 385
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L M + D + + L + E L G H+ +++SG + + + +
Sbjct: 386 PEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAI 445
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+D+Y C D +VF + D V WN MI+ Y+ + S +AL F+++ G+ P
Sbjct: 446 LDMYGSCKS-TDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMP 504
Query: 333 DDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D SFV +SAC+ S + GK +H + + SN ++V NA++ MY+K G+L AR++
Sbjct: 505 DVISFVAALSACAAQASLAEGKLLHDRIRETGLESN-MTVANAVLNMYAKSGSLVLARKM 563
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F +MP + +S N MI+ +AQHG + LR F M P ++TFVSV+SAC+H G V
Sbjct: 564 FGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLV 623
Query: 452 AEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------ 504
+G Q + S++ D P EHY CM+DL+ RAGKL AE+ I A P P +
Sbjct: 624 KDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTML 683
Query: 505 -----------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A K+A H ++L P + YV+L+N+Y GK +E A IRRLM ++ ++K
Sbjct: 684 GASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRK 743
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
+P FS I VK+++H F D ++ EI LE +S +M +AGY PD
Sbjct: 744 EPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQ 803
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
K++ L +HSEKLA+AFGL+ST+ G + ++KNLR+CGDCH A KFIS I GREI VRD++
Sbjct: 804 KKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSH 863
Query: 662 RFHCFKDGRCSCGDYW 677
RFH F +G CSCGDYW
Sbjct: 864 RFHHFDNGTCSCGDYW 879
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 236/511 (46%), Gaps = 61/511 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L R L GK +HA K+ + ++ + + +Y CG L
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSL----------- 49
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A+ FD++P D +++ LI A+ GD+E AL LF+
Sbjct: 50 --------------------IDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRS 89
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGF--DHYASVNNSLLTCYSR 176
M+ + ++ A S + L+ +++H + DHY V+ +LL Y +
Sbjct: 90 MQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHY--VSTTLLHMYGK 147
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+++A++VF + K V WN+M+ AY Q +A+Q+F M+ + + T
Sbjct: 148 CSSVEDARKVFDGIRH-KRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIG 206
Query: 237 ILTAFTSLEDL-VGGL-------QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+L A + L+DL V L + H HL S F + L++ Y C GD+ +
Sbjct: 207 VLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF------ATALVNFYGSC-GDLEQAFR 259
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-L 347
F + +L+L MI+ Y+Q+E + D+AL FK + G D + + V++ACS
Sbjct: 260 AFSR-HRLELILATAMITQYTQRERW-DEALELFKVMLLEGVKLDRIACMAVLNACSGPR 317
Query: 348 SPSLGKQIHALTIKIEIRSNR-ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+ IH EIR +R ++ NAL+ MY KCG+LE+A +F M + +S N++
Sbjct: 318 GLEEGRMIHGFM--REIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTI 375
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IA + QH EAL L M + I+FV+ L CA + +A+G+ S + + G
Sbjct: 376 IAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVES-G 434
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + ++D+ G DA R+ AM
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 154/370 (41%), Gaps = 51/370 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C L G+ +H+ +++ + L N + +Y C A F
Sbjct: 406 SFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S+N ++ AYA Q R++S AL LF+
Sbjct: 466 KARDQVSWNAMITAYAAQPRLSS------------------------------EALLLFQ 495
Query: 121 DMREKRF--DTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ F D F + A+ +L K LH G + +V N++L Y+++G
Sbjct: 496 QMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSG 555
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+++F +M + D +SWN M+ A+ QH + L+ F+ M + T S++
Sbjct: 556 SLVLARKMFGKM-PLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVV 614
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------LIDLYAKCSGDMRDCMKVFEE 292
+A + + G+Q L+ H I ++DL A+ +G + K
Sbjct: 615 SACSHGGLVKDGVQLFVSLL----HDFPTISPRAEHYYCMVDLIAR-AGKLDAAEKFIAA 669
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
P +PD V+ +TM+ G S+ + ++A + L + PD + V+ SNL +
Sbjct: 670 APLKPDRVIHSTML-GASKVHKDVERARKSAEHLMELT--PDRSAAYVVL---SNLYDEV 723
Query: 352 GKQIHALTIK 361
GK+ I+
Sbjct: 724 GKKDEGAKIR 733
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/672 (34%), Positives = 348/672 (51%), Gaps = 74/672 (11%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQT--QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
+ FI L S A HH F A++FS ++ A A L D
Sbjct: 18 DEFIRLCSSGRLKDALHHPFRGVLWSDASLFS-HIFRACRAIPLLRQLHAFAATSGAAAD 76
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA 155
+ N L+ AYAD GD +A LF+ + ++ + + G I
Sbjct: 77 RFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCI----------------- 119
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
+NG L A+ +F +M ++ +WN+MV ++
Sbjct: 120 --------------------KNGDLGSARELFDKM-PTRNVATWNAMVAGLTNVGLDEDS 158
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
LQ F M + D + L S+ L D+V G Q HA++++SG + +G+ L +
Sbjct: 159 LQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHM 218
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y +C G + + V +P +V +NT I+G +Q + S+ AL F + V PD
Sbjct: 219 YMRC-GCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGD-SEGALEYFSMMRGVEVAPDVV 276
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+FV IS CS+L+ + G+Q+HA IK + + V +LV MYS+CG L D+ R++D
Sbjct: 277 TFVSAISCCSDLAALAQGQQVHAQVIKAGV-DKVVPVITSLVHMYSRCGCLGDSERVYDG 335
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ L++MI+ HG G +A+ LF+ M+ P +TF+++L AC+H+G EG
Sbjct: 336 YCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEG 395
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA------ 508
++F +M +GF+P +HY+C++DLLGR+G L +AE LI +MP + K
Sbjct: 396 LEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACK 455
Query: 509 -----------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
A ++ +P ++ PYV+L+NI A S +W +V +R++MR++ ++K+PG
Sbjct: 456 TQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGV 515
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKR 605
SW+E K Q+H F D SHP EI YL+EM K++Q GY PD KE
Sbjct: 516 SWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVS 575
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
L HHSEKLA+AF L+ G PI VMKNLR+C DCH AIK IS + GREI VRD RFH
Sbjct: 576 LTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHH 635
Query: 666 FKDGRCSCGDYW 677
F+DGRCSCGDYW
Sbjct: 636 FRDGRCSCGDYW 647
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + C L G+ +HA +K V + + +YS+CGCL + ++
Sbjct: 277 TFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGY 336
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++F + +++A + A +LF Q+ +P+ V++ L+ A + G + L
Sbjct: 337 CGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGL 396
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + T GF S +K +C+ G R
Sbjct: 397 EFFELMTK----TYGFQPS------------VKHYNCIVDLLG----------------R 424
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+G LDEA+ + M D V W +++ A
Sbjct: 425 SGCLDEAEALILSMPVRADGVIWKTLLSA 453
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/710 (33%), Positives = 374/710 (52%), Gaps = 68/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K C G DL G+ +H +K+ + Y+ N I++Y+K GC
Sbjct: 128 TYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGC----------- 176
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I SA +F ++P DLVS+N++IS Y GD +LS F+
Sbjct: 177 --------------------IESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFR 216
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D F++ G++ A S L K++HC + + V SL+ Y++ G
Sbjct: 217 EMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCG 276
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASI 237
+D A+R+F ++ + K V+WN+M+ Y + + E+ ++M +L D T+ ++
Sbjct: 277 RMDYAERLFDQITD-KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINL 335
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L LE ++ G H I++GF + + + L+D+Y +C G ++ +F ++ + +
Sbjct: 336 LPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGEC-GKLKPAECLFGQMNERN 394
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIH 356
L+ WN MI+ Y++ E + +A+ F+ L PD + ++ A + L S +QIH
Sbjct: 395 LISWNAMIASYTKNGE-NRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIH 453
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
K+++ SN V+N++V MY KCGNL AR +FDRM + +S N++I YA HG G
Sbjct: 454 GYVTKLKLDSNTF-VSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFG 512
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
++ LF M E P TFVS+L +C+ G V EG +YF+ MK + P EHY C
Sbjct: 513 RISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGC 572
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSN 519
++DL+GR G L A+ IE MP P G + L AA H L LE N
Sbjct: 573 ILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDN 632
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+L+N+YA +G+WE+V I+ M+ G++K G S +++ + FV +D S I
Sbjct: 633 TGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEI 692
Query: 580 KEIHNYLEEMSRKMKQAGYV--------PDKEKRLVH----HSEKLAVAFGLLSTSYGEP 627
+++ L+ +S+K+ + YV D EK+ + HS +LA+ FGL+ST+ G P
Sbjct: 693 NMVYDVLDIISKKIGEDVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNP 752
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+LV KN+RIC CH K IS REI VRD+ FH F G CSCGDYW
Sbjct: 753 VLVRKNIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 218/443 (49%), Gaps = 15/443 (3%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N S L++Y + + +A LF+ + Q D +N +I + D G A+ + M
Sbjct: 59 NSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRME 118
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
D FT +I A +L +++H I G D + NSL+ Y++ G ++
Sbjct: 119 FGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIE 178
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+ VF EM ++D VSWNSM+ Y +G +L F+EM + + LD +++ IL A
Sbjct: 179 SAEMVFREM-PVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ L G + H +++S + + + L+D+YAKC G M ++F++I +V W
Sbjct: 238 SLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKC-GRMDYAERLFDQITDKSIVAW 296
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSPS-LGKQIHALT 359
N MI GYS + S ++ +K+ G HPD + + ++ C+ L LGK +H
Sbjct: 297 NAMIGGYSLNAQ-SFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFA 355
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I+ + + + ALV MY +CG L+ A LF +M E N +S N+MIA Y ++G +A
Sbjct: 356 IRNGFLPHLV-LETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKA 414
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK---YFSMMKDMFGFEPEGEHYSC 476
+ LF+ + + P T S+L A A + E ++ Y + +K + +
Sbjct: 415 MTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLK----LDSNTFVSNS 470
Query: 477 MIDLLGRAGKLTDAERLIEAMPF 499
++ + G+ G L A + + M F
Sbjct: 471 IVFMYGKCGNLLRAREIFDRMTF 493
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 320/568 (56%), Gaps = 40/568 (7%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
NL ++Q+H A G V N L+ YS LD+A +F M ++D VSW+ M
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMC-VRDSVSWSVM 807
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
V + + + + F+E++ D YTL ++ A L++L G H + K G
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ + + L+D+Y KC ++ D +F+++ + DLV W MI GY++ ++++L F
Sbjct: 868 DLDHFVCAALVDMYGKCR-EIEDARFLFDKMXERDLVTWTVMIGGYAECGN-ANESLVLF 925
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAM 378
K+ G PD + V V+ AC+ L G A TI I+ + ++ A++ M
Sbjct: 926 DKMREEGVVPDKVAMVTVVFACAKL----GAMHKARTIDDYIQRKKFQLDVILGTAMIDM 981
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
++KCG +E AR +FDRM E N +S ++MIA Y HG G +AL LF ML + I P IT
Sbjct: 982 HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 1041
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
VS+L AC+H G V EG ++FS M + + + +HY+C++DLLGRAG+L +A +LI +M
Sbjct: 1042 VSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT 1101
Query: 499 FNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
+A KAA L+L+P N Y++L+NIYA +G+WE+VA
Sbjct: 1102 XEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAK 1161
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
IR LM R ++K PG++WIEV + H F D +HP KEI+ L+ + K++ GYVPD
Sbjct: 1162 IRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPD 1221
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
K L HSEKLA+AFGL++T PI ++KNLR+CGDCH K +SA
Sbjct: 1222 TNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSA 1281
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I GR I VRD RFH FK+G CSCGDYW
Sbjct: 1282 ITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/533 (35%), Positives = 295/533 (55%), Gaps = 34/533 (6%)
Query: 132 FTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
F +S L+ + NL ++Q+H A G V N L+ YS LD+A +F M
Sbjct: 64 FYISALV--NCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 121
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
++D VSW+ MV + + + + F+E++ D YTL ++ A L++L G
Sbjct: 122 -VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGR 180
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
H + K G + + + L+D+Y KC ++ D +F+++ + DLV W MI GY++
Sbjct: 181 LIHHIVYKFGLDLDHFVCAALVDMYVKCR-EIEDARFLFDKMQERDLVTWTVMIGGYAEC 239
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISV 371
+ ++++L F+K+ G PD + V V+ AC+ L +I I+ + + +
Sbjct: 240 GK-ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 298
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
A++ MY+KCG +E AR +FDRM E N +S ++MIA Y HG G +AL LF ML + +
Sbjct: 299 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGM 358
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P IT S+L AC+H G V EG ++FS M + + + +HY+C++DLLGRAG+L +A
Sbjct: 359 LPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEAL 418
Query: 492 RLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+LI++M +A KAA L+L+ N YV+L+NIYA +G
Sbjct: 419 KLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAG 478
Query: 535 KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
+WE+VA IR LM R ++K PG++WIEV + H F D +HP KEI+ L+ +S K++
Sbjct: 479 RWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLE 538
Query: 595 QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
GYVPD K L HSEKLA+AFGL++T PI ++KNLR
Sbjct: 539 LVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 160/336 (47%), Gaps = 8/336 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ N L+ Y+ + A LFD + D VS++ ++ +A GD + F+++
Sbjct: 769 NLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELI 828
Query: 124 EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
D +TL +I A + NL + + +H + G D V +L+ Y + ++
Sbjct: 829 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 888
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A+ +F +M E +D V+W M+ Y + E+L LF +M + D + +++ A
Sbjct: 889 DARFLFDKMXE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 947
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L + ++ + F + +G+ +ID++AKC G + ++F+ + + +++ W
Sbjct: 948 AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC-GCVESAREIFDRMEEKNVISW 1006
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
+ MI+ Y + +AL F + R G P+ + V ++ ACS+ + + + + +
Sbjct: 1007 SAMIAAYGYHGQ-GRKALDLFPMMLRSGILPNKITLVSLLYACSH-AGLVEEGLRFFSXM 1064
Query: 362 IEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRM 395
E S R V + +V + + G L++A +L M
Sbjct: 1065 WEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 125/247 (50%), Gaps = 8/247 (3%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F L+ Y + I AR LFD++ + DLV++ +I YA+CG +L LF+ MRE+
Sbjct: 196 FVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 255
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYC---GFDHYASVNNSLLTCYSRNGFLDE 182
D + ++ A + L + + + Y F + +++ Y++ G ++
Sbjct: 256 GVVPDKVAMVTVVFACA-KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 314
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M E K+ +SW++M+ AYG H +G +AL LF M+S + D TLAS+L A +
Sbjct: 315 AREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACS 373
Query: 243 SLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ GL+F + + + + + ++DL + +G + + +K+ + + + D L
Sbjct: 374 HAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGR-AGRLDEALKLIKSMTIEKDEGL 432
Query: 301 WNTMISG 307
W +
Sbjct: 433 WGAFLGA 439
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 116/261 (44%), Gaps = 38/261 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V++ C ++L G+ +H + K + ++ + +Y KC + A F++
Sbjct: 838 TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM 897
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ ++ V++ YA + LFD++ + PD V+ T++ A A G A
Sbjct: 898 XERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 957
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
++ ++ K+F D + +++ +++
Sbjct: 958 TIDDYIQRKKFQLD---------------------------------VILGTAMIDMHAK 984
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ A+ +F M E K+ +SW++M+ AYG H +G +AL LF M+ + + TL S
Sbjct: 985 CGCVESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 1043
Query: 237 ILTAFTSLEDLVGGLQFHAHL 257
+L A + + GL+F + +
Sbjct: 1044 LLYACSHAGLVEEGLRFFSXM 1064
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 42/198 (21%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-- 93
L I +Y+KCGC+ +A F++ + NV S++ ++AAY R+ D P
Sbjct: 298 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH---GQGRKALDLFPMML 354
Query: 94 -----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI 148
PD ++ +L+ A + G E L F M E
Sbjct: 355 SSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWED----------------------- 391
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
++ HY V + L R G LDEA ++ M KDE W + + A
Sbjct: 392 -----YSVRTDVKHYTCVVDLL----GRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRT 442
Query: 209 HREGLEALQLFQEMVSLQ 226
H++ + A + ++ LQ
Sbjct: 443 HKDVVLAEKAATSLLELQ 460
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 36/195 (18%)
Query: 36 LSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-- 93
L I +++KCGC+ +A F++ + NV S++ ++AAY + A LF + +
Sbjct: 974 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 1033
Query: 94 --PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL 151
P+ ++ +L+ A + G E L F M E
Sbjct: 1034 ILPNKITLVSLLYACSHAGLVEEGLRFFSXMWED-------------------------- 1067
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
++ HY V + L R G LDEA ++ M KDE W + + A H++
Sbjct: 1068 --YSVRXDVKHYTCVVDLL----GRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKD 1121
Query: 212 GLEALQLFQEMVSLQ 226
A + ++ LQ
Sbjct: 1122 VXLAEKAATSLLELQ 1136
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/706 (31%), Positives = 370/706 (52%), Gaps = 70/706 (9%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL+ C L G+ LHA LK+ + N +++Y+KCG
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTKCG---------------- 314
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
R+ SA ++F +I + D +S+N+++S Y G A+ +M
Sbjct: 315 ---------------RVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR 359
Query: 125 KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
F D + L +A + L+ K++H AI D V N+L+ Y + +++
Sbjct: 360 GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEY 419
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
+ VF M IKD +SW +++ Y Q +EAL++F+E + +D + SIL A +
Sbjct: 420 SAHVFDRM-RIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
LE ++ Q H + I++G + + + +ID+Y +C G++ +K+FE + Q D+V W
Sbjct: 479 GLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGEC-GEVYHSLKMFETVEQKDIVTWT 536
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
+MI+ Y+ ++AL F ++ PD + V ++ A LS + GK++H I+
Sbjct: 537 SMINCYANSG-LLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
++ ++LV MYS CG+L A ++F+ + + V +MI HG G +A+
Sbjct: 596 RNFHMEE-AIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAID 654
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF+ ML+T + P +++F+++L AC+H+ V EG+ Y MM + EP EHY+C++DLL
Sbjct: 655 LFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLL 714
Query: 482 GRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYV 524
GR+G+ +A I++MP P S+ A+ AAN L+LEP N YV
Sbjct: 715 GRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYV 774
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+++N++A GKW +R + +RG++K P SWIE+ +H F D SH + I+
Sbjct: 775 LVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINL 834
Query: 585 YLEEMSRKMKQAGYVPDKEKRLVH-------------HSEKLAVAFGLLSTSYGEPILVM 631
L E++ ++++ G + + ++H HSE+LA++FGL++T G P+ +
Sbjct: 835 KLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIA 894
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH K +S + R+I VRD RFH F G CSCGD+W
Sbjct: 895 KNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 247/526 (46%), Gaps = 47/526 (8%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR---EKRF 127
LL Y + R+A AR LFD + + S+N LI AY G AL +++ MR
Sbjct: 101 LLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGV 160
Query: 128 DTDGFTLSGLITASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
DG TL+ ++ AS + C ++H LA+ G D V N+L+ Y++ G LD A
Sbjct: 161 APDGCTLASVLKASGVEGDGRCGC-EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAM 219
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
RVF M + +D SWNSM+ Q+ L+AL LF+ M L ++ YT +L T L
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTEL 279
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G + HA L+KSG N + L+ +Y KC G + ++VF EI + D + WN+M
Sbjct: 280 AQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKC-GRVDSALRVFREIDEKDYISWNSM 337
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIE 363
+S Y Q Y+ +A+ ++ R G+ PD V + SA +L L GK++HA IK
Sbjct: 338 LSCYVQNGLYA-EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQR 396
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ V N L+ MY KC +E + +FDRM + +S ++I YAQ +EAL +F
Sbjct: 397 LDSD-TQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIF 455
Query: 424 EWMLETNIPPTNITFVSVLSACA--HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+ I + S+L AC+ T +A+ +++ + + +ID+
Sbjct: 456 REAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNR----IIDIY 511
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
G G++ + ++ E +E + V + + N YA SG E
Sbjct: 512 GECGEVYHSLKMFET------------------VEQKDIVTWTSMINCYANSGLLNEALV 553
Query: 542 IRRLMRDRGVQKKP-----------GFSWIEVKKQMHVFVAEDGSH 576
+ M+ VQ G S + K++H F+ H
Sbjct: 554 LFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFH 599
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/646 (34%), Positives = 356/646 (55%), Gaps = 63/646 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V ++C G G LH LK+ + + + + +Y+KC
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCD------------ 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R++ A ++F+ +P P SYN +I YA AL +F+
Sbjct: 289 -------------------RMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQ 329
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK------QLHCLAIYCGFDHYASVNNSLLTCY 174
++ D +LSG +TA S +IK QLH LA+ CG V N++L Y
Sbjct: 330 SLQRTYLSFDEISLSGALTACS----VIKGHLEGIQLHGLAVKCGLGFNICVANTILDMY 385
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G L EA +F +M E +D VSWN+++ A+ Q+ E ++ L LF M+ + D +T
Sbjct: 386 GKCGALVEACTIFDDM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S++ A + L G++ H ++KSG + +GS L+D+Y KC G + + K+ + +
Sbjct: 445 GSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC-GMLMEAEKIHDRLE 503
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ V WN++ISG+S +++ S+ A F ++ +G PD+ ++ V+ C+N++ LGK
Sbjct: 504 EKTTVSWNSIISGFSSQKQ-SENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGK 562
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIHA +K+ + S+ + + + LV MYSKCGN++D+R +F++ P+ + V+ ++MI YA H
Sbjct: 563 QIHAQILKLNLHSD-VYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYH 621
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G +A++LFE M N+ P + F+SVL ACAH G V +G YF +M+ +G +P EH
Sbjct: 622 GHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEH 681
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
YSCM+DLLGR+ ++ +A +LIE+M F +A KA N LQL+
Sbjct: 682 YSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P ++ YV+LAN+YA G W EVA IR +M++ ++K+PG SWIEV+ ++H F+ D +H
Sbjct: 742 PQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLST 622
P +EI+ + +MK AGYVPD + L E+ GL +T
Sbjct: 802 PRSEEIYEQTHLLVDEMKWAGYVPDIDSMLDEEVEEQDPYEGLKTT 847
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 271/498 (54%), Gaps = 12/498 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF +L+ C + L GK HA + + + VP + Y++N + Y K ++ A F++
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVP-TIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
H +V S+N ++ YA + A+ LFD +P+ D+VS+N+L+S Y G ++ +F
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR + D T S ++ A S + L Q+HCLAI GF++ ++L+ YS+
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
LD A R+F EM E ++ V W++++ Y Q+ +E L+LF++M+ + +G+ T AS+
Sbjct: 187 KKLDGAFRIFREMPE-RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ L G Q H H +KS F +S IG+ +D+YAKC M D KVF +P P
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCD-RMSDAWKVFNTLPNPP 304
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIH 356
+N +I GY+++++ +AL F+ L R D+ S ++ACS + L G Q+H
Sbjct: 305 RQSYNAIIVGYARQDQ-GLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
L +K + N I V N ++ MY KCG L +A +FD M + VS N++IA + Q+
Sbjct: 364 GLAVKCGLGFN-ICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFGFEPEGEHYS 475
++ L LF ML + + P + T+ SV+ ACA + G + + ++K G + S
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG--S 480
Query: 476 CMIDLLGRAGKLTDAERL 493
++D+ G+ G L +AE++
Sbjct: 481 ALVDMYGKCGMLMEAEKI 498
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 36/302 (11%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+T + IL ++L+ L G Q HA +I + F ++ + L+ Y K S +M KVF+
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCK-SSNMNYAFKVFD 65
Query: 292 EIPQPDLVLWNTMISGYSQ------------------------------KEEYSDQALGC 321
+P D++ WNTMI GY++ + +++
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F ++ + D +F V+ ACS + LG Q+H L I++ N + +ALV MYS
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFE-NDVVTGSALVDMYS 184
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KC L+ A R+F MPE N V +++IAGY Q+ +E L+LF+ ML+ + + T+ S
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 441 VLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
V +CA G Q + +K F ++ + +D+ + +++DA ++ +P
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCDRMSDAWKVFNTLPN 302
Query: 500 NP 501
P
Sbjct: 303 PP 304
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 232/660 (35%), Positives = 357/660 (54%), Gaps = 70/660 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM--REKRFDTDGFTLSGLITAS 141
A ++FDQIP+P+L ++NTLI A+A L +F M +RF + +T +I A+
Sbjct: 83 ACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRF-PNSYTFPFVIKAA 141
Query: 142 SNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+ L+ + +H + + F ++NSL+ YS G LD A VF ++ E KD VSW
Sbjct: 142 TEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVE-KDIVSW 200
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NSM+ + Q EALQLF+ M + T+ +L+A DL G ++ +
Sbjct: 201 NSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIER 260
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS---- 315
+G N + + ++D+Y KC G + D ++F+++ + D+V W TMI GY++ +Y
Sbjct: 261 NGIDINLILSNAMLDMYVKC-GSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 316 --------------------------DQALGCFKKLN-RVGYHPDDCSFVCVISACSNLS 348
+AL F++L P++ + ++AC+ L
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG IH K I+ N + +L+ MYSKCG+LE A +F + + ++MI
Sbjct: 380 AMDLGGWIHVYIKKQGIKLN-FHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMI 438
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
AG A HG G A+ LF M ET + P +TF ++L AC+H+G V EG+ +F+ M+ ++G
Sbjct: 439 AGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGV 498
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAAN 510
P +HY+CM+D+LGRAG L +A LIE MP P + +A A +
Sbjct: 499 VPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACS 558
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
L+ + +N YV+L+NIYA +GKW+ V+ +R+ M+ G++K+PG S IEV +H F+
Sbjct: 559 RLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFL 618
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAF 617
D SHP+ EI++ L+E+ ++K GYV D KE L HSEKLA+A+
Sbjct: 619 VGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAY 678
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ +PI ++KNLR+CGDCH+ K IS + R+I +RD YRFH F G CSC DYW
Sbjct: 679 GLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 177/379 (46%), Gaps = 41/379 (10%)
Query: 148 IKQLHCLAIYCG--FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+KQLH + G FD ++ S LD A +VF ++ + +WN+++ A
Sbjct: 46 LKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPR-PNLYTWNTLIRA 104
Query: 206 YGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+ + ++ L +F +M+ Q + YT ++ A T + L+ G H ++K+ F
Sbjct: 105 FASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGS 164
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ I + LI Y+ GD+ VF +I + D+V WN+MISG+ Q ++AL FK+
Sbjct: 165 DLFISNSLIHFYSSL-GDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGS-PEEALQLFKR 222
Query: 325 LNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ P+ + V V+SAC+ + G+ + I N I ++NA++ MY KCG
Sbjct: 223 MKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLI-LSNAMLDMYVKCG 281
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYA-------------------------------Q 412
+LEDARRLFD+M E + VS +MI GYA Q
Sbjct: 282 SLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQ 341
Query: 413 HGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G EAL +F E L N P +T S L+ACA G + G +K G +
Sbjct: 342 NGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ-GIKLNF 400
Query: 472 EHYSCMIDLLGRAGKLTDA 490
+ +ID+ + G L A
Sbjct: 401 HITTSLIDMYSKCGHLEKA 419
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 129/248 (52%), Gaps = 4/248 (1%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HAH++++G + + L A S D KVF++IP+P+L WNT+I ++
Sbjct: 48 QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFAS 107
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRI 369
+ L + L+ P+ +F VI A + +S L G+ IH + +K S+ +
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSD-L 166
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
++N+L+ YS G+L+ A +F ++ E + VS NSMI+G+ Q G EAL+LF+ M
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
N P +T V VLSACA + G ++ + G + + M+D+ + G L D
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFG-RWACDYIERNGIDINLILSNAMLDMYVKCGSLED 285
Query: 490 AERLIEAM 497
A RL + M
Sbjct: 286 ARRLFDKM 293
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 152/311 (48%), Gaps = 9/311 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R DL G+ +N + + LSN + +Y KCG L A F++
Sbjct: 234 TMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKM 293
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ S+ ++ YA+ +AR++FD +P+ D+ ++N LIS+Y G + AL++F+
Sbjct: 294 EEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFR 353
Query: 121 DMR-EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+++ K + TL+ + A + + L +H G + SL+ YS+
Sbjct: 354 ELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKC 413
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L++A VFY + E +D W++M+ H G A+ LF +M ++ + T ++
Sbjct: 414 GHLEKALEVFYSV-ERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNL 472
Query: 238 LTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
L A S LV G L F+ G S + ++D+ + +G + + +++ E++P
Sbjct: 473 LCA-CSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGR-AGCLEEAVELIEKMPI 530
Query: 295 QPDLVLWNTMI 305
P +W ++
Sbjct: 531 VPSASVWGALL 541
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 362/674 (53%), Gaps = 48/674 (7%)
Query: 49 CLSAAH-HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
C A H HA + A++F LL Y + + A +F +P DLV++N +++ YA
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 108 DCGDTESALS--LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY-CGFDH 162
G A++ L M+ R + TL L+ A L +H I C +
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSN 262
Query: 163 YAS---------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
S + +LL Y++ G L A+RVF M ++EV+W++++ +
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEVTWSALIGGFVLCSRMT 321
Query: 214 EALQLFQEMVSLQLG-LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
+A LF+ M++ L L ++AS L A SL+ L G Q HA L KSG H + G+ L
Sbjct: 322 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 381
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+ +YAK +G + + +F+E+ D V ++ ++SGY Q +++A FKK+ P
Sbjct: 382 LSMYAK-AGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEP 439
Query: 333 DDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + V +I ACS+L+ + ++ I ++ S+ NAL+ MY+KCG ++ +R++F
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+ MP + VS N+MIAGY HG+G EA LF M PP +TF+ +LSAC+H+G V
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---------- 502
EG+ +F +M+ +G P EHY CM+DLL R G L +A I++MP
Sbjct: 560 EGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619
Query: 503 -------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+ K + +L P +V+L+NIY+A+G+++E A +R + + +G +K P
Sbjct: 620 CRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSP 679
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------ 603
G SWIE+ +H FV D SHP EI+ L+ + +K+ GY PD
Sbjct: 680 GCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKE 739
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
K L+ HSEKLA+A+G+LS S + I V KNLR+CGDCH IK IS + R I VRD RF
Sbjct: 740 KALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRF 799
Query: 664 HCFKDGRCSCGDYW 677
H FK+G+CSCGD+W
Sbjct: 800 HHFKNGQCSCGDFW 813
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 221/438 (50%), Gaps = 27/438 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESA--LSLFKDMREKRFDTDGFTLSGLI 138
++ A LFDQIP PD+ +YN LI AY+ T +A L L++ M R + +T +
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 139 TASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
A S ++ C + +H AI+ G V+ +LL Y + L +A +F M +D
Sbjct: 133 KACSALADHHC-GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM-PARD 190
Query: 196 EVSWNSMVVAYGQHREGLEALQ--LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
V+WN+M+ Y H A+ L +M +L + TL ++L L G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 254 HAHLIKSGFHQNSH----------IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
HA+ I++ H N + +G+ L+D+YAKC G + +VF+ +P + V W+
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKC-GSLLYARRVFDAMPARNEVTWSA 309
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
+I G+ + QA FK + G S + AC++L +G+Q+HAL K
Sbjct: 310 LIGGFVLCSRMT-QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ ++ ++ N+L++MY+K G ++ A LFD M +TVS +++++GY Q+G EA
Sbjct: 369 SGVHAD-LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDL 480
+F+ M N+ P T VS++ AC+H + G+ + S++ + G E + +ID+
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI--IRGLASETSICNALIDM 485
Query: 481 LGRAGKLTDAERLIEAMP 498
+ G++ + ++ MP
Sbjct: 486 YAKCGRIDLSRQVFNMMP 503
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 181/394 (45%), Gaps = 43/394 (10%)
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE--GLEALQLFQEMVSLQLGLDMYTL 234
+G L A +F ++ D ++N ++ AY + L L++ M+ ++ + YT
Sbjct: 70 SGHLSRAHHLFDQIPS-PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
L A ++L D G H H I +G + + + L+D+Y KC+ + D +F +P
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC-LPDAAHIFATMP 187
Query: 295 QPDLVLWNTMISGYSQKEEYSDQA---LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
DLV WN M++GY+ Y L +++R+ P+ + V ++ + +
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQGALA 245
Query: 351 LGKQIHALTIKIEIRSNRIS---------VNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
G +HA I+ + SNR S + AL+ MY+KCG+L ARR+FD MP N V
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ +++I G+ +A LF+ ML + PT+I S L ACA + G++
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLH 363
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+++ G + + ++ + +AG + A IAL F ++
Sbjct: 364 ALLAKS-GVHADLTAGNSLLSMYAKAGLIDQA-------------IAL-----FDEMAVK 404
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ V Y L + Y +G+ EE + + M+ V+
Sbjct: 405 DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 438
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 44/328 (13%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ C L G+ LHAL K+ V HA++
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGV-------------------------------HADL 375
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+ N LL+ YA+ I A LFD++ D VSY+ L+S Y G E A +FK M+
Sbjct: 376 TAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC 435
Query: 126 RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ D T+ LI A S+ L + H I G S+ N+L+ Y++ G +D +
Sbjct: 436 NVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLS 495
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
++VF M +D VSWN+M+ YG H G EA LF EM +L D T +L+A +
Sbjct: 496 RQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGS--GLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
++ G + H+++ G+ + ++DL ++ G + + + + +P + D+ +
Sbjct: 555 SGLVIEGKHWF-HVMRHGYGLTPRMEHYICMVDLLSR-GGFLDEAYEFIQSMPLRADVRV 612
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRV 328
W ++ Y + LG KK++R+
Sbjct: 613 WVALLGAC---RVYKNIDLG--KKVSRM 635
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 86/232 (37%), Gaps = 45/232 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++ C L G+ H + + + N I +Y+KCG + + FN
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S +NT+I+ Y G + A +LF
Sbjct: 503 PSRDIVS-------------------------------WNTMIAGYGIHGLGKEATALFL 531
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
+M F DG T L++A S++ +I+ H + +HY + + L
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLL--- 588
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEM 222
SR GFLDEA M D W +++ A Y G + ++ QE+
Sbjct: 589 -SRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQEL 639
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/648 (35%), Positives = 361/648 (55%), Gaps = 37/648 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N F L+ AY+ + SAR +F+ I D+V + ++S Y + G E +L L M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRM 238
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
F + +T + AS K +H + ++ V LL Y++ G +
Sbjct: 239 GMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDM 298
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A +VF EM + D V W+ M+ + Q+ +A+ +F M + + +TL+SIL
Sbjct: 299 SDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNG 357
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ G Q H ++K GF + ++ + LID+YAKC M +K+F E+ ++V
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCE-KMDTAVKLFAELSSKNVVS 416
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WNT+I GY E +AL F++ R + +F + AC++L S LG Q+H L
Sbjct: 417 WNTVIVGYENLGE-GGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLA 475
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK + R++V+N+L+ MY+KCG+++ A+ +F+ M + S N++I+GY+ HG+G +A
Sbjct: 476 IKTN-NAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LR+F+ M ++ P +TF+ VLS C++ G + +GQ F M G EP EHY+CM+
Sbjct: 535 LRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVR 594
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVP 522
L GR+G+L A LIE +P+ P + A ++A L++ P +
Sbjct: 595 LFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEAT 654
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA + +W VA+IR+ M+++GV+K+PG SWIE + +H F HP +K I
Sbjct: 655 YVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLI 714
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLST-SYGEPIL 629
+ LE ++ K +AGYVPD K+KRL HSE+LA+A+GL+ S IL
Sbjct: 715 NGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRIL 774
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLRIC DCH+A+K IS+I R++ +RD RFH F G CSC D+W
Sbjct: 775 IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 228/499 (45%), Gaps = 41/499 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ +L+ C+ + D V+ K++H LK K CL
Sbjct: 51 AYGTMLRRCIRKNDSVSAKAIHCDILK------------------KGSCL---------- 82
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS-LF 119
++F+ N+LL AY + A LFD++P+ + VSY TL YA C D S L
Sbjct: 83 ---DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA-CQDPVGLYSRLH 138
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
++ E L ++ +C LH + G+D A V +L+ YS G
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICW--WLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D A+ VF E KD V W +V Y ++ ++LQL M + YT + L
Sbjct: 197 VDSARSVF-EGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALK 255
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L H ++K+ + + +G GL+ LY + GDM D KVF E+P+ D+V
Sbjct: 256 ASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQL-GDMSDAFKVFNEMPKNDVV 314
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHAL 358
W+ MI+ + Q + ++A+ F ++ P++ + +++ C+ LG+Q+H L
Sbjct: 315 PWSFMIARFCQN-GFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K+ + + V+NAL+ +Y+KC ++ A +LF + N VS N++I GY G G +
Sbjct: 374 VVKVGFDLD-VYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGK 432
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F L + T +TF S L ACA + G + + + S +I
Sbjct: 433 ALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNS-LI 491
Query: 479 DLLGRAGKLTDAERLIEAM 497
D+ + G + A+ + M
Sbjct: 492 DMYAKCGDIKVAQTVFNEM 510
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 200/443 (45%), Gaps = 39/443 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF LK +G KS+H LK + + LY++ G +S A FN
Sbjct: 249 TFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFN-- 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++P+ D+V ++ +I+ + G A+ +F
Sbjct: 307 -----------------------------EMPKNDVVPWSFMIARFCQNGFCNKAVDIFI 337
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE + FTLS ++ + C L +QLH L + GFD V+N+L+ Y++
Sbjct: 338 RMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCE 397
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A ++F E+ K+ VSWN+++V Y EG +AL +F+E + Q+ + T +S L
Sbjct: 398 KMDTAVKLFAELSS-KNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSAL 456
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL + G+Q H IK+ + + + LID+YAKC GD++ VF E+ D+
Sbjct: 457 GACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKC-GDIKVAQTVFNEMETIDV 515
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
WN +ISGYS QAL F + P+ +F+ V+S CSN G+
Sbjct: 516 ASWNALISGYST-HGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFE 574
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I + +V ++ + G L+ A L + +P +V + + + +
Sbjct: 575 SMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNE 634
Query: 418 E-ALRLFEWMLETNIPPTNITFV 439
E A R E +L+ N P T+V
Sbjct: 635 EFARRSAEEILKIN-PKDEATYV 656
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 32/313 (10%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
LD + ++L D V H ++K G + + L++ Y K D +D +
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD-KDALN 105
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F+E+P+ + V + T+ GY+ ++ +G + +L+R G+ + F + +L
Sbjct: 106 LFDEMPERNNVSYVTLTQGYACQD-----PVGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 349 PS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+ + +H+ +K+ SN V AL+ YS CG+++ AR +F+ + + V ++
Sbjct: 161 KAEICWWLHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIV 219
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMK 462
+ Y ++G ++L+L M P N TF + L A H K GQ ++K
Sbjct: 220 SCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQ----ILK 275
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN---PGSIAL----------KAA 509
+ +P ++ L + G ++DA ++ MP N P S + KA
Sbjct: 276 TCYELDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAV 333
Query: 510 NHFLQLEPSNAVP 522
+ F+++ VP
Sbjct: 334 DIFIRMREGFVVP 346
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 361/674 (53%), Gaps = 48/674 (7%)
Query: 49 CLSAAH-HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
C A H HA + A++F LL Y + + A +F +P DLV++N +++ YA
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 108 DCGDTESALS--LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY-CGFDH 162
G A++ L M+ R + TL L+ A L +H I C +
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPN 262
Query: 163 YAS---------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
S + +LL Y++ G L A+RVF M ++EV+W++++ +
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEVTWSALIGGFVLCSRMT 321
Query: 214 EALQLFQEMVSLQLG-LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
+A LF+ M++ L L ++AS L A SL+ L G Q HA L KSG H + G+ L
Sbjct: 322 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 381
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+ +YAK +G + + +F+E+ D V ++ ++SGY Q +++A FKK+ P
Sbjct: 382 LSMYAK-AGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEP 439
Query: 333 DDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + V +I ACS+L+ + ++ I ++ S+ NAL+ MY+KCG ++ +R++F
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+ MP + VS N+MIAGY HG+G EA LF M PP +TF+ +LSAC+H+G V
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---------- 502
EG+ +F +M +G P EHY CM+DLL R G L +A I++MP
Sbjct: 560 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619
Query: 503 -------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+ K + +L P +V+L+NIY+A+G+++E A +R + + +G +K P
Sbjct: 620 CRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSP 679
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------ 603
G SWIE+ +H FV D SHP EI+ L+ + +K+ GY PD
Sbjct: 680 GCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKE 739
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
K L+ HSEKLA+A+G+LS S + I V KNLR+CGDCH IK IS + R I VRD RF
Sbjct: 740 KALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRF 799
Query: 664 HCFKDGRCSCGDYW 677
H FK+G+CSCGD+W
Sbjct: 800 HHFKNGQCSCGDFW 813
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 221/438 (50%), Gaps = 27/438 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESA--LSLFKDMREKRFDTDGFTLSGLI 138
++ A LFDQIP PD+ +YN LI AY+ T +A L L++ M R + +T +
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 139 TASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
A S ++ C + +H AI+ G V+ +LL Y + L +A +F M +D
Sbjct: 133 KACSALADHHC-GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM-PARD 190
Query: 196 EVSWNSMVVAYGQHREGLEALQ--LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
V+WN+M+ Y H A+ L +M +L + TL ++L L G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 254 HAHLIKSGFHQNSH----------IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
HA+ I++ H N + +G+ L+D+YAKC G + +VF+ +P + V W+
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC-GSLLYARRVFDAMPARNEVTWSA 309
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
+I G+ + QA FK + G S + AC++L +G+Q+HAL K
Sbjct: 310 LIGGFVLCSRMT-QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ ++ ++ N+L++MY+K G ++ A LFD M +TVS +++++GY Q+G EA
Sbjct: 369 SGVHAD-LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDL 480
+F+ M N+ P T VS++ AC+H + G+ + S++ + G E + +ID+
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI--IRGLASETSICNALIDM 485
Query: 481 LGRAGKLTDAERLIEAMP 498
+ G++ + ++ MP
Sbjct: 486 YAKCGRIDLSRQVFNMMP 503
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 180/394 (45%), Gaps = 43/394 (10%)
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE--GLEALQLFQEMVSLQLGLDMYTL 234
+G L A +F ++ D ++N ++ AY + L L++ M+ ++ + YT
Sbjct: 70 SGHLSRAHHLFDQIPS-PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
L A ++L D G H H I +G + + + L+D+Y KC+ + D +F +P
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC-LPDAAHIFATMP 187
Query: 295 QPDLVLWNTMISGYSQKEEYSDQA---LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
DLV WN M++GY+ Y L +++R+ P+ + V ++ + +
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQGALA 245
Query: 351 LGKQIHALTIKIEIRSNRIS---------VNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
G +HA I+ + NR S + AL+ MY+KCG+L ARR+FD MP N V
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ +++I G+ +A LF+ ML + PT+I S L ACA + G++
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLH 363
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+++ G + + ++ + +AG + A L + M A+K
Sbjct: 364 ALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEM-------AVK----------- 404
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ V Y L + Y +G+ EE + + M+ V+
Sbjct: 405 DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 438
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 149/343 (43%), Gaps = 64/343 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ L+ C L G+ LHAL K+ V
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGV------------------------------ 371
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
HA++ + N LL+ YA+ I A LFD++ D VSY+ L+S Y G E A +FK
Sbjct: 372 -HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D T+ LI A S+ L + H I G S+ N+L+ Y++ G
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D +++VF M +D VSWN+M+ YG H G EA LF EM +L D T +L
Sbjct: 491 RIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------------LIDLYAKCSGDMRDC 286
+A + H+ L+ G H +G G ++DL ++ G + +
Sbjct: 550 SACS-----------HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR-GGFLDEA 597
Query: 287 MKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ + +P + D+ +W ++ Y + LG KK++R+
Sbjct: 598 YEFIQSMPLRADVRVWVALLGAC---RVYKNIDLG--KKVSRM 635
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/639 (34%), Positives = 354/639 (55%), Gaps = 41/639 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YA+ I +A +FD++P D +S+N++IS G A+ LF M + +
Sbjct: 449 NALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D TL ++ A S+ + + +H ++ G S+ N+LL YS ++
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F M + K+ VSW +M+ +Y R GL + L QEMV + D++ + S+L F
Sbjct: 569 FRNMAQ-KNVVSWTAMITSY--TRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGD 625
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
E L G H + I++G + + + L+++Y C +M + VF+ + D++ WNT+
Sbjct: 626 ESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCR-NMEEARLVFDHVTNKDIISWNTL 684
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I GYS + +++++ F + + + P+ + C++ A +++S G++IHA ++
Sbjct: 685 IGGYS-RNNFANESFSLFSDM-LLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRG 742
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + +NALV MY KCG L AR LFDR+ + N +S MIAGY HG G +A+ LF
Sbjct: 743 FLEDSYT-SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALF 801
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E M + + P +F ++L AC H+G AEG K+F+ M+ + EP+ +HY+C++DLL
Sbjct: 802 EQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSH 861
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
G L +A IE+MP P S +A K A+ +LEP N YV+L
Sbjct: 862 TGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLL 921
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
ANIYA + +WE V ++ + RG+++ G SWIEV+ ++HVF+A++ +HP I +L
Sbjct: 922 ANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFL 981
Query: 587 EEMSRKMKQAGYVPDKEKRL------VH------HSEKLAVAFGLLSTSYGEPILVMKNL 634
+ ++R+M++ G+ P K+ L VH HS KLAV FG+L G PI V KN
Sbjct: 982 DHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNS 1041
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
++C CH A KFIS + REI +RD+ RFH F+ GRCSC
Sbjct: 1042 KVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 269/565 (47%), Gaps = 63/565 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQ--PDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
L+ AY + + AR +FD++P D+ + +L+SAYA GD + +SLF+ M+
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 129 TDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D +S ++ AS ++ + +H L G +V N+L+ YSR G +++A +V
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M +D +SWNS + Y + A+ LF +M S + T+ S+L A L
Sbjct: 256 FDSM-HARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Query: 247 LVGGLQFHAHLIKSGFHQN---------SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ G H + +KSG + +GS L+ +Y KC GDM +VF+ +P
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKC-GDMGSARRVFDAMPSKG 373
Query: 298 LV-LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQI 355
V +WN ++ GY++ E+ +++L F++++ +G PD+ + C++ + LS + G
Sbjct: 374 NVHVWNLIMGGYAKAAEF-EESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVA 432
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K+ + +V NAL++ Y+K +++A +FDRMP +T+S NS+I+G +G+
Sbjct: 433 HGYLVKLGF-GTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGL 491
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHT-----GKVAEGQKYFSMMKDMFGFEPE 470
EA+ LF M + T +SVL ACA + G+V G +S+ + G E
Sbjct: 492 NSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHG---YSVKTGLIG---E 545
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
+ ++D+ ++ F + N V + + Y
Sbjct: 546 TSLANALLDMYSNCSDWHSTNQI------------------FRNMAQKNVVSWTAMITSY 587
Query: 531 AASGKWEEVATIRRLMRDRGVQKKP--------GFSWIEVKKQ---MHVFVAEDGSHPMI 579
+G +++VA + + M G++ GF+ E KQ +H + +G ++
Sbjct: 588 TRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLL 647
Query: 580 KEIHNYLEEM---SRKMKQAGYVPD 601
+ N L EM R M++A V D
Sbjct: 648 P-VANALMEMYVNCRNMEEARLVFD 671
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 146/633 (23%), Positives = 254/633 (40%), Gaps = 111/633 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK + G+ +H L K + + ++N I LYS+CGC+ A F+ +
Sbjct: 204 VLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARD 263
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQP------------------------------ 94
S+N ++ Y A LF ++
Sbjct: 264 AISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHG 323
Query: 95 ---------DLVSYNT---------LISAYADCGDTESALSLFKDMREK----------- 125
DL S + L+ Y CGD SA +F M K
Sbjct: 324 YSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMG 383
Query: 126 ------RFDTDGFTLSGL----ITASSNNL-CLIKQLHCLA------------IYCGFDH 162
F+ + IT + L CL+K + CL+ + GF
Sbjct: 384 GYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGT 443
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
+V N+L++ Y+++ +D A VF M +D +SWNS++ + EA++LF M
Sbjct: 444 QCAVCNALISFYAKSNMIDNAVLVFDRMPH-QDTISWNSVISGCTSNGLNSEAIELFVRM 502
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
LD TL S+L A G H + +K+G + + + L+D+Y+ CS D
Sbjct: 503 WMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCS-D 561
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
++F + Q ++V W MI+ Y++ + D+ G +++ G PD + V+
Sbjct: 562 WHSTNQIFRNMAQKNVVSWTAMITSYTRAGLF-DKVAGLLQEMVLDGIKPDVFAVTSVLH 620
Query: 343 A-CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+ S GK +H I+ + + V NAL+ MY C N+E+AR +FD + + +
Sbjct: 621 GFAGDESLKQGKSVHGYAIRNGME-KLLPVANALMEMYVNCRNMEEARLVFDHVTNKDII 679
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FS 459
S N++I GY+++ E+ LF ML P +T +L A A + G++ ++
Sbjct: 680 SWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYA 738
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSN 519
+ + GF + + ++D+ + G L A L F +L N
Sbjct: 739 LRR---GFLEDSYTSNALVDMYVKCGALLVARVL------------------FDRLTKKN 777
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + ++ Y G ++ + MR GV+
Sbjct: 778 LISWTIMIAGYGMHGCGKDAVALFEQMRGSGVE 810
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 130/244 (53%), Gaps = 14/244 (5%)
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ--PDLVLWNTMISGYSQKEEYSDQALGCFK 323
S +G L+ Y KC GD+ VF+E+P D+ +W +++S Y++ ++ + + F+
Sbjct: 130 SVLGKRLVLAYLKC-GDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDF-QEGVSLFR 187
Query: 324 KLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
++ G PD + CV+ ++L S + G+ IH L K+ + +V NAL+A+YS+C
Sbjct: 188 QMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGL-GEACAVANALIALYSRC 246
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G +EDA ++FD M + +S NS I+GY +G A+ LF M +++T +SVL
Sbjct: 247 GCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVL 306
Query: 443 SACAH-----TGKVAEGQKYFS-MMKDMFGFEPEGEHY--SCMIDLLGRAGKLTDAERLI 494
ACA GKV G S ++ D+ + + S ++ + + G + A R+
Sbjct: 307 PACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVF 366
Query: 495 EAMP 498
+AMP
Sbjct: 367 DAMP 370
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
VL G L GKS+H ++N + ++N + +Y C + A F+ +
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++ S+N L+ Y+R + +A+ + SLF DM
Sbjct: 677 DIISWNTLIGGYSR--------------------------NNFAN-----ESFSLFSDML 705
Query: 124 EKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+F + T++ ++ AS ++L +++H A+ GF + +N+L+ Y + G L
Sbjct: 706 -LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALL 764
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A RV ++ K+ +SW M+ YG H G +A+ LF++M + D + ++IL A
Sbjct: 765 VA-RVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYAC 823
Query: 242 TSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
G +F + K + ++DL + +G++++ + E +P +PD
Sbjct: 824 CHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSH-TGNLKEAFEFIESMPIEPDSS 882
Query: 300 LWNTMISG 307
+W +++ G
Sbjct: 883 IWVSLLHG 890
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L L G+ +HA L+ +Y SN + +Y KCG L A F++
Sbjct: 714 TMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRL 773
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ S+ +++A Y A LF+Q+ +PD S++ ++ A G T
Sbjct: 774 TKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGW 833
Query: 117 SLFKDMREK 125
F MR++
Sbjct: 834 KFFNAMRKE 842
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/643 (35%), Positives = 353/643 (54%), Gaps = 41/643 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A YA+ R A +FD +P D++S+N++IS G + A+ LF M + +
Sbjct: 235 NALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEE 294
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D TL ++ A + + L L + +H ++ GF S+ N LL YS ++
Sbjct: 295 LDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKI 354
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F M + K+ VSW +M+ +Y R GL + LFQEM D++ + S L AF
Sbjct: 355 FRNMVQ-KNVVSWTAMITSY--TRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGN 411
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
E L G H + I++G + + + L+++Y KC G+M + +F+ + D++ WNT+
Sbjct: 412 ELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKC-GNMEEAKLIFDGVVSKDMISWNTL 470
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I GYS + +++A F ++ + P+ + C++ A ++LS G+++HA ++
Sbjct: 471 IGGYS-RNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRG 528
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ V NAL+ MY KCG L ARRLFDR+ N +S M+AGY HG G +A+ LF
Sbjct: 529 YLEDDF-VANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALF 587
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E M + I P +F ++L AC+H+G EG ++F M+ EP +HY+CM+DLL
Sbjct: 588 EQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLIN 647
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
G L +A I++MP P S +A + A +LEP N YV+L
Sbjct: 648 TGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLL 707
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
ANIYA + +WE V ++ + RG+++ G SWIE K ++HVF+A++ +HP I +L
Sbjct: 708 ANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFL 767
Query: 587 EEMSRKMKQAGYVPDKEKRL------VH------HSEKLAVAFGLLSTSYGEPILVMKNL 634
E++++M++ G+ P K+ L VH HS KLAVAFG+L+ S G I V KN
Sbjct: 768 NEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNS 827
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+C CH A KFIS + REI +RD+ RFH F+ GRCSC YW
Sbjct: 828 RVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 251/562 (44%), Gaps = 70/562 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVP---FSAYLSNHFILLYSKCGCLSAAHHAF 57
++ VL+ C R L GK H L + + L +L+Y KCG L A F
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVF 152
Query: 58 NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESAL 116
D++PQ D+ + L+S YA GD +
Sbjct: 153 -------------------------------DEMPQVSDVRVWTALMSGYAKAGDLREGV 181
Query: 117 SLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
LF+ M D +T+S ++ A ++ + +H L GF +V N+L+ Y
Sbjct: 182 LLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFY 241
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMY 232
+++ +A VF M +D +SWNSM+ G GL +A++LF M LD
Sbjct: 242 AKSNRTKDAILVFDGMPH-RDVISWNSMI--SGCTSNGLYDKAIELFVRMWLEGEELDSA 298
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S+L A L L G H + +K+GF + + + L+D+Y+ CS D R K+F
Sbjct: 299 TLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCS-DWRSTNKIFRN 357
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSL 351
+ Q ++V W MI+ Y++ Y D+ G F+++ G PD + + A N
Sbjct: 358 MVQKNVVSWTAMITSYTRAGLY-DKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKH 416
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GK +H I+ + ++V NAL+ MY KCGN+E+A+ +FD + + +S N++I GY+
Sbjct: 417 GKSVHGYAIRNGM-EKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYS 475
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEP 469
++ + EA LF ML + P +T +L A A + G++ +++ + G+
Sbjct: 476 RNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRR---GYLE 531
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANI 529
+ + +ID+ + G L A RL F +L N + + ++
Sbjct: 532 DDFVANALIDMYVKCGALLLARRL------------------FDRLSNKNLISWTIMVAG 573
Query: 530 YAASGKWEEVATIRRLMRDRGV 551
Y G+ + + MR G+
Sbjct: 574 YGMHGRGRDAIALFEQMRVSGI 595
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 13/362 (3%)
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI 148
D +P D+ N I GD E AL L D + + + +L
Sbjct: 57 DWVPTSDV---NLHIQRLCRSGDLEEALGLLGS---DGVDDRSYGAVLQLCSEVRSLEGG 110
Query: 149 KQLHCL--AIYCGFDHYASV-NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
K+ H L A G D +V L+ Y + G L+ A+RVF EM ++ D W +++
Sbjct: 111 KRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSG 170
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + + E + LF++M + D YT++ +L L + G H L K GF
Sbjct: 171 YAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQ 230
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+G+ L+ YAK S +D + VF+ +P D++ WN+MISG + Y D+A+ F ++
Sbjct: 231 CAVGNALMAFYAK-SNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLY-DKAIELFVRM 288
Query: 326 NRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G D + + V+ AC+ L LG+ +H ++K S + S+ N L+ MYS C +
Sbjct: 289 WLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFIS-QTSLANVLLDMYSNCSD 347
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
++F M + N VS +MI Y + G+ + LF+ M P S L A
Sbjct: 348 WRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHA 407
Query: 445 CA 446
A
Sbjct: 408 FA 409
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L L G+ +HA L+ +++N I +Y KCG L A F++
Sbjct: 500 TMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRL 559
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ N+ S+ +++A Y R A LF+Q+ PD S++ ++ A + G +
Sbjct: 560 SNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGW 619
Query: 117 SLFKDMREK 125
F MR++
Sbjct: 620 RFFDAMRKE 628
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 361/648 (55%), Gaps = 37/648 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N F L+ AY+ + SAR +F+ I D+V + ++S Y + G E +L L M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R F + +T + AS K +H + + V LL Y++ G +
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A +VF EM + D V W+ M+ + Q+ EA+ LF M + + +TL+SIL
Sbjct: 299 SDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ G Q H ++K GF + ++ + LID+YAKC M +K+F E+ + V
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE-KMDTAVKLFAELSSKNEVS 416
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WNT+I GY E +A F++ R + +F + AC++L S LG Q+H L
Sbjct: 417 WNTVIVGYENLGE-GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK + +++V+N+L+ MY+KCG+++ A+ +F+ M + S N++I+GY+ HG+G +A
Sbjct: 476 IKTN-NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LR+ + M + + P +TF+ VLS C++ G + +GQ+ F M G EP EHY+CM+
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVP 522
LLGR+G+L A +LIE +P+ P + A ++A L++ P +
Sbjct: 595 LLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT 654
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+++N+YA + +W VA+IR+ M++ GV+K+PG SWIE + +H F HP +K I
Sbjct: 655 YVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLI 714
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLST-SYGEPIL 629
+ LE ++ K +AGYVPD K+KRL HSE+LA+A+GL+ S IL
Sbjct: 715 NGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRIL 774
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLRIC DCH+A+K IS+I R++ +RD RFH F G CSCGD+W
Sbjct: 775 IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 209/468 (44%), Gaps = 39/468 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF LK +G K +H LK + + LY++ G +S A FN
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN-- 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++P+ D+V ++ +I+ + G A+ LF
Sbjct: 307 -----------------------------EMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE + FTLS ++ + C L +QLH L + GFD V+N+L+ Y++
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A ++F E+ K+EVSWN+++V Y EG +A +F+E + Q+ + T +S L
Sbjct: 398 KMDTAVKLFAELSS-KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL + G+Q H IK+ + + + LID+YAKC GD++ VF E+ D+
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKC-GDIKFAQSVFNEMETIDV 515
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
WN +ISGYS QAL + P+ +F+ V+S CSN G++
Sbjct: 516 ASWNALISGYST-HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFE 574
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIG 416
I+ + +V + + G L+ A +L + +P +V + +M++
Sbjct: 575 SMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNE 634
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
A R E +L+ N P T+V V + A + A MK+M
Sbjct: 635 EFARRSAEEILKIN-PKDEATYVLVSNMYAGAKQWANVASIRKSMKEM 681
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 32/318 (10%)
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
S+ GLD + ++L D + H ++K G + + L++ Y K D
Sbjct: 42 SIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD- 100
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+D + +F+E+P+ + V + T+ GY+ ++ +G + +L+R G+ + F +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQD-----PIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 344 CSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+L + + +H+ +K+ SN V AL+ YS CG+++ AR +F+ + + V
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG-----KVAEGQKY 457
+++ Y ++G ++L+L M P N TF + L A G K GQ
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ-- 272
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN---PGSIAL-------- 506
++K + +P ++ L + G ++DA ++ MP N P S +
Sbjct: 273 --ILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 507 --KAANHFLQLEPSNAVP 522
+A + F+++ + VP
Sbjct: 329 CNEAVDLFIRMREAFVVP 346
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/713 (32%), Positives = 371/713 (52%), Gaps = 69/713 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +++ C + G+ + A L++ S L+ I LY +CG L
Sbjct: 262 TYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILD--------- 312
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A+ L + + Q D+V++N +++A A GD A+ L +
Sbjct: 313 ----------------------RAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLR 350
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF-DHYASVNNSLLTCYSRN 177
M + F + T ++ A +N L +++H + CG +V NS++T Y +
Sbjct: 351 RMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKC 410
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A VF M KD+VSWN+++ A + + +AL+LF M L + +TL S+
Sbjct: 411 GQTEAAMSVFEAMPR-KDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSL 469
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSH-IGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L A LEDL Q HA GF NS +G+ ++++YA+C G + D K F+ + +
Sbjct: 470 LEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARC-GSLLDAKKAFDSLEEK 528
Query: 297 DLVLWNTMISGYSQ-KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
LV W+ +++ Y+Q K+ +A F+++ G P + +FV + AC+ ++ G+
Sbjct: 529 GLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRS 588
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H + + N ++ MY KCG+ DA+ +FD+MPE +S NS+I YA +G
Sbjct: 589 MHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNG 648
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+EAL + ML P + T VS+L +H G + G ++F G EP
Sbjct: 649 HALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQL 708
Query: 475 SCMIDLLGRAGKLTDAERLIEAMP------------------FNPGSIALKAANHFLQLE 516
C++DLL R G L AE LI A P + ++ A +LE
Sbjct: 709 KCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELE 768
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P ++ +V+LAN+YA+ G+W + + IR++M V+K+PG SWIE+ +H F++ + H
Sbjct: 769 PQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKH 828
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P I+EI LE+++ +M++AGYVPD KE+ L HSE+LA+ FGL+ST
Sbjct: 829 PKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRP 888
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GE I V+KNLR+C DCH A K IS++ GREI VRD+ RFH FK G+CSCGD+W
Sbjct: 889 GETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 247/574 (43%), Gaps = 79/574 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F L C +L G+ +H+ + + + + +SN + +Y KC + A F+
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 61 QHANVFSFNVLLAAYAR----------------------------------QLRIAS-AR 85
+V S+ +LA YA+ +LR+ R
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 86 QLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMRE----------------- 124
++ +I +PD + N L+ Y CG + S+F M +
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 125 ---------KRFDTDGFTLSGLITASSNNLC----LIKQ---LHCLAIYCGFDHYASVNN 168
++ D +G + + S +C +K+ + + F +
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
SL++ Y + G LD AK + M + +D V+WN+MV A Q+ + EA+ L + M G
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQ-RDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCM 287
+ T S+L A +LE L G + HA ++ G Q +G+ +I +Y KC G M
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKC-GQTEAAM 417
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VFE +P+ D V WN +I+ ++ D AL F + G ++ + + ++ AC L
Sbjct: 418 SVFEAMPRKDDVSWNAVINASVGNSKFQD-ALELFHGMELEGLRSNEFTLLSLLEACGGL 476
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
L +QIHA N +V N++V MY++CG+L DA++ FD + E V+ + +
Sbjct: 477 EDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSII 536
Query: 407 IAGYAQ--HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+A YAQ G G A + F+ M I P +TFVS L ACA + G+
Sbjct: 537 LAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAAS 596
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
E + +I++ G+ G +DA+ + + MP
Sbjct: 597 GFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 630
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 214/427 (50%), Gaps = 7/427 (1%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK--RFDTDGF 132
Y + R+ A +FD I ++ S+ +++AY+ G AL LF M+ + R D F
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 133 TLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
++ A+S L +Q+H + G ++NSL+ Y + + A++VF M
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM-L 120
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
++D VSW +M+ Y Q+ +AL+ M + + + T +I+ L L G +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
H +I G + +G+ L+ +Y C G D VF + Q ++LW TMI+G SQ
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSC-GSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+Y ++ L F+K++ G ++ +++ ++ C NL G+ I A ++ S+ + +
Sbjct: 240 QY-EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL-L 297
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+L+++Y +CG L+ A+ L + M + + V+ N+M+ AQ+G EA+ L M
Sbjct: 298 ATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGF 357
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+T++SVL ACA+ +++G++ + + + E + +I + G+ G+ A
Sbjct: 358 GANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417
Query: 492 RLIEAMP 498
+ EAMP
Sbjct: 418 SVFEAMP 424
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y KC+ + D + VF+ I ++ W M++ YSQ Y +AL F ++ G PD
Sbjct: 1 MYGKCA-RVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYR-EALELFTRMQWEGTRPDK 58
Query: 335 CSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
FV + AC+ S L G+QIH+ + + SN I ++N+LV MY KC ++ A ++F
Sbjct: 59 VVFVIALDACAA-SGELDHGRQIHSSVVGSGLTSN-IIISNSLVNMYGKCQDVPCAEKVF 116
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
D M + VS +M+A YAQ+G +AL M + P +TFV+++ CA +
Sbjct: 117 DGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLD 176
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G+K + + G EP+G + ++ + G G D + + M
Sbjct: 177 LGRKIHHRIINE-GLEPDGILGNALVHMYGSCGSFDDMKSVFSRM 220
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/640 (36%), Positives = 356/640 (55%), Gaps = 72/640 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ YA AR +FD+I ++V +N +I +Y + + AL ++K M + F D
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ ASS ++L + Q+H + G D V N L+ Y + L EA++V
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT-SLEDL 247
E+ +D VSWNSMV Y Q+ +AL+L +EM +L L + T+AS+L A T + D
Sbjct: 180 EI-PCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDN 238
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
V LY K ++F ++ + ++ WN MI+
Sbjct: 239 V--------------------------LYVK---------EMFLKLTKKSVISWNVMIAM 263
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRS 366
Y +A+ + ++ G PD S V V+ A +LS SLG+++H + ++
Sbjct: 264 YVNNS-MPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLP 322
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
N + + NAL+ MY+KCG L DAR +F++M + VS S+I+ Y + G G +A+ +F M
Sbjct: 323 NLL-LENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEM 381
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ + P +I FVSVL+AC+H G + +G+ YF++M + G P+ EH++C++DLLGRAGK
Sbjct: 382 RNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GITPKLEHFACVVDLLGRAGK 440
Query: 487 LTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANI 529
+ +A I MP P +I + AA+ L L P ++ YV+L+NI
Sbjct: 441 IDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNI 500
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
YA +G+W +VA IR +M +G++K PG S +E+ +H F+A D SHP K+I+ L+ +
Sbjct: 501 YAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVL 560
Query: 590 SRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
KMK+ GY+P DKE L HSEKLAVAF +++T G PI V KNLR+C
Sbjct: 561 VGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVC 620
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH A K IS IA REI +RDT+RFH F++G CSCGDYW
Sbjct: 621 GDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 59/390 (15%)
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
SV L+ Y+ G A+ +F E+ + K+ V +N M+ +Y + +AL +++ M +
Sbjct: 55 SVGIKLMRVYAACGEPGLARHIFDEITD-KNVVFFNVMIRSYVNNHLYKDALLVYKTMYT 113
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
DMYT +L A + + L GLQ H ++K G N ++G+GLI +Y KC ++
Sbjct: 114 QGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKS-LK 172
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+ +V +EIP D+V WN+M+S Y+Q ++D AL +++ + P+DC+ ++ A
Sbjct: 173 EAQQVLDEIPCRDVVSWNSMVSVYAQNGRFND-ALELCREMEALNLKPNDCTMASLLPAV 231
Query: 345 SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+N + N+ + +F ++ + + +S N
Sbjct: 232 TNTTSD---------------------------------NVLYVKEMFLKLTKKSVISWN 258
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMK 462
MIA Y + + EA+ L+ M + P ++ VSVL A ++ G++ F+ K
Sbjct: 259 VMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERK 318
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVP 522
+ P + +ID+ + G L DA + M F + V
Sbjct: 319 KLL---PNLLLENALIDMYAKCGCLRDARAVFNQMQFR------------------DVVS 357
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + + Y G+ + + MR+ G+
Sbjct: 358 WTSIISAYGKCGQGRDAVAVFAEMRNSGLN 387
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
N +G L+ +YA C G+ +F+EI ++V +N MI Y Y D AL +K
Sbjct: 53 NPSVGIKLMRVYAAC-GEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKD-ALLVYKT 110
Query: 325 LNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
+ G+ PD ++ CV+ A S S SL G QIH +KI + N + V N L+AMY KC
Sbjct: 111 MYTQGFVPDMYTYPCVLKASSR-SDSLWVGLQIHGAVLKIGLDLN-LYVGNGLIAMYGKC 168
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
+L++A+++ D +P + VS NSM++ YAQ+G +AL L M N+ P + T S+L
Sbjct: 169 KSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLL 228
Query: 443 SACAHT 448
A +T
Sbjct: 229 PAVTNT 234
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 163/382 (42%), Gaps = 45/382 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK L G +H LK + + Y+ N I +Y KC L A ++
Sbjct: 122 TYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEI 181
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N +++ YA+ R A
Sbjct: 182 PCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLY 241
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+++F ++ + ++S+N +I+ Y + + A+ L+ M + D ++ ++ A +
Sbjct: 242 VKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGD 301
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L +++H A + N+L+ Y++ G L +A+ VF +M + +D VSW S
Sbjct: 302 LSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQM-QFRDVVSWTS 360
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ AYG+ +G +A+ +F EM + L D S+L A + L G + + + G
Sbjct: 361 IISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECG 420
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALG 320
+ ++DL + +G + + ++P +PD +W ++S YS+ +G
Sbjct: 421 ITPKLEHFACVVDLLGR-AGKIDEAYGFIRQMPLEPDERVWGPLLSAC---RVYSNMNIG 476
Query: 321 CFKKLNRVGYHPDDCSFVCVIS 342
+ +P+ + ++S
Sbjct: 477 ILAADKLLMLNPEHSGYYVLLS 498
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K++H + + SV L+ +Y+ CG AR +FD + + N V N MI Y
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEG 471
+ + +AL +++ M P T+ VL A + + + G Q + +++K G +
Sbjct: 98 NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLK--IGLDLNL 155
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +I + G+ L +A+++++ +P
Sbjct: 156 YVGNGLIAMYGKCKSLKEAQQVLDEIP 182
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 347/614 (56%), Gaps = 42/614 (6%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG 159
N LI + G+ + AL L E L L A N+L +H L + G
Sbjct: 42 NHLIQSLCKQGNLKQALYLLS--HESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGG 99
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
FD + L+ +S +D A++VF + + WN++ A G + L+L+
Sbjct: 100 FDQDPFLATKLINMFSELDTVDNARKVF-DKTRKRTIYVWNALFRALALAGRGNDVLELY 158
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ----FHAHLIKSGFHQNSHIGSGLIDL 275
M + + D +T +L A + E LV LQ HAH+++ G+ + H+ + L+D+
Sbjct: 159 PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 218
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK--LNRVGYHPD 333
YA+ G + VF+E+P ++V W+ MI+ Y+ K +AL F++ LN P+
Sbjct: 219 YARF-GCVSYASAVFDEMPVKNVVSWSAMIACYA-KNGKPYEALELFREMMLNTHDSVPN 276
Query: 334 DCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ V V+ AC+ + GK IHA ++ + S + V +AL+ MY++CG LE + +F
Sbjct: 277 SVTMVSVLQACAAFAALEQGKLIHAYILRRGLDS-ILPVISALITMYARCGKLESGQLIF 335
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
DRM + + V NS+I+ Y HG G +A+++FE M++ P++I+F+SVL AC+HTG V
Sbjct: 336 DRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVE 395
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---------- 502
EG+K F M G +P EHY+CM+DLLGRA +L +A ++IE + PG
Sbjct: 396 EGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGA 455
Query: 503 -------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+A +A+ +LEP+NA YV+LA+IYA + W+EV +++L+ R +QK P
Sbjct: 456 CRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVP 515
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKE 603
G SWIEV+++++ F + D +P +++H L +S +MKQ GY P +KE
Sbjct: 516 GRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKE 575
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
+ ++ HSEKLAVAFGL++TS G+ I + KNLR+C DCH+ KFIS A REI VRD RF
Sbjct: 576 RIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRF 635
Query: 664 HCFKDGRCSCGDYW 677
H FKDG CSCGDYW
Sbjct: 636 HHFKDGVCSCGDYW 649
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 128/259 (49%), Gaps = 8/259 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H A+V L+ YAR ++ A +FD++P ++VS++ +I+ YA G
Sbjct: 199 HILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYE 258
Query: 115 ALSLFKDMREKRFDT--DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
AL LF++M D+ + T+ ++ A + L K +H + G D V ++L
Sbjct: 259 ALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISAL 318
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+T Y+R G L+ + +F M + KD V WNS++ +YG H G +A+++F+EM+
Sbjct: 319 ITMYARCGKLESGQLIFDRMHK-KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPS 377
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ S+L A + + G + ++K G + + ++DL + + + + K+
Sbjct: 378 HISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGR-ANRLDEAAKI 436
Query: 290 FEEIP-QPDLVLWNTMISG 307
E++ +P +W +++
Sbjct: 437 IEDLRIEPGPKVWGSLLGA 455
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 244/717 (34%), Positives = 377/717 (52%), Gaps = 79/717 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C DL + +++H HA
Sbjct: 131 TFPFVLKACSALLDLRSARAVHC-------------------------------HAARAG 159
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCG---DTESALS 117
HA++F L+ YA+ A +F ++P D+V++N +++ YA G DT + L
Sbjct: 160 LHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLL 219
Query: 118 LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY-CGF-DHYASV--NNSLL 171
L +D + TL L+ A L + +H ++ C DH V +LL
Sbjct: 220 LMQDDHAP----NASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALL 275
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LD 230
Y++ G L A RVF M +++EV+W+++V + LEA LF++M++ L L
Sbjct: 276 DMYAKCGHLVYASRVFEAMA-VRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLS 334
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
++AS L A +L DL G Q HA L KSG H + G+ L+ +YAK +G + +F
Sbjct: 335 PTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAK-AGLIDQATTLF 393
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+++ D V ++ ++SGY Q + +D+A F+K+ PD + V +I ACS+L+
Sbjct: 394 DQMVVKDTVSYSALVSGYVQNGK-ADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAAL 452
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GK H I I S S+ NAL+ MY+KCG ++ +R++FD MP + VS N+MIAG
Sbjct: 453 QHGKCGHGSVIVRGIASE-TSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAG 511
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y HG+G EA LF M P ++TF+ ++SAC+H+G V EG+++F MM +G P
Sbjct: 512 YGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITP 571
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHF 512
EHY M+DLL R G L +A + I+ MP + + ++
Sbjct: 572 RMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMI 631
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
QL P +V+L+NI++A+G+++E A +R + +++G +K PG SWIE+ +H F+
Sbjct: 632 QQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGG 691
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSEKLAVAFGLL 620
D SH EI+ L+ + + + GY D K L++HSEKLA+AFG+L
Sbjct: 692 DRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVL 751
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ S + I V KNLR+CGDCH IK+++ + R I VRD RFH FK+G+CSCGD+W
Sbjct: 752 TLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 212/427 (49%), Gaps = 22/427 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
AR LFDQIP P + YN LI AY+ G + R + + +T ++ A S
Sbjct: 82 ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141
Query: 144 NLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L L + +HC A G V+ +L+ Y++ A VF M +D V+WN+
Sbjct: 142 LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM-PARDVVAWNA 200
Query: 202 MVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
M+ Y G++ + + L L Q+ + TL ++L L G HA+ +
Sbjct: 201 MLAGYALHGKYSDTIACLLLMQD----DHAPNASTLVALLPLLAQHGALSQGRAVHAYSV 256
Query: 259 KS-GFHQNSH---IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
++ H + +G+ L+D+YAKC G + +VFE + + V W+ ++ G+
Sbjct: 257 RACSLHDHKDGVLVGTALLDMYAKC-GHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315
Query: 315 SDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+A FK + G S + AC+NLS LGKQ+HAL K + ++ ++
Sbjct: 316 L-EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTD-LTAG 373
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N+L++MY+K G ++ A LFD+M +TVS +++++GY Q+G EA R+F M N+
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433
Query: 433 PTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P T VS++ AC+H + G+ + S++ + G E + +ID+ + G++ +
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVI--VRGIASETSICNALIDMYAKCGRIDLSR 491
Query: 492 RLIEAMP 498
++ + MP
Sbjct: 492 QIFDVMP 498
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 31/328 (9%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
YT +L A ++L DL H H ++G H + + + L+D+YAKC+ R VF
Sbjct: 130 YTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCA-SFRHAATVFR 188
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+P D+V WN M++GY+ +YSD + C L + + P+ + V ++ + S
Sbjct: 189 RMPARDVVAWNAMLAGYALHGKYSD-TIACL-LLMQDDHAPNASTLVALLPLLAQHGALS 246
Query: 351 LGKQIHALTIK---IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
G+ +HA +++ + + + V AL+ MY+KCG+L A R+F+ M N V+ ++++
Sbjct: 247 QGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALV 306
Query: 408 AGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
G+ G +EA LF+ ML + PT++ S L ACA+ + G++ +++
Sbjct: 307 GGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKS 364
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYV 524
G + + ++ + +AG + A L F Q+ + V Y
Sbjct: 365 -GLHTDLTAGNSLLSMYAKAGLIDQATTL------------------FDQMVVKDTVSYS 405
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQ 552
L + Y +GK +E + R M+ VQ
Sbjct: 406 ALVSGYVQNGKADEAFRVFRKMQACNVQ 433
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 37/312 (11%)
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
GD+ +F++IP P + +N +I YS + + R P++ +F V
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGP-ALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 341 ISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+ ACS L + +H + + ++ + V+ ALV +Y+KC + A +F RMP +
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHAD-LFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
V+ N+M+AGYA HG + + M + + P + T V++L A G +++G+ +
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNAS-TLVALLPLLAQHGALSQGRAVHA 253
Query: 460 MMKDMFGFEPEGEHY---SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLE 516
+ + ++D+ + G L A R+ EAM
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR---------------- 297
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG------------VQKKPGFSWIEVKK 564
N V + L + G+ E ++ + M +G ++ S + + K
Sbjct: 298 --NEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGK 355
Query: 565 QMHVFVAEDGSH 576
Q+H +A+ G H
Sbjct: 356 QLHALLAKSGLH 367
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG+L AR LFD++P N++I Y+ G + P N TF V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 442 LSACA 446
L AC+
Sbjct: 136 LKACS 140
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/646 (34%), Positives = 360/646 (55%), Gaps = 36/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F + L+ AY+ ++ AR +FD I D V++ ++S Y++ E AL+ F MR
Sbjct: 184 NAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMR 243
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F L+ ++ A+ ++ L K +H A+ D V +LL Y++ G+++
Sbjct: 244 MAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIE 303
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A+ VF E+ D + W+ ++ Y Q + +A ++F M+ + + ++L+ +L A
Sbjct: 304 DARTVF-EIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQAC 362
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
++ L G Q H +IK G+ +G+ L+D+YAKC +M + +++F + + V W
Sbjct: 363 ANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCR-NMENSLEIFRSLRDANEVSW 421
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTI 360
NT+I GY Q +++ AL F+++ +F V+ AC+N S QIH+L
Sbjct: 422 NTIIVGYCQSG-FAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIE 480
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K ++ I V N+L+ Y+KCG + DA ++F+ + + + VS N++I+GYA HG +AL
Sbjct: 481 KSTFNNDTI-VCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDAL 539
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF M +++ P ++TFV++LS C TG V +G F+ M +P +HY+C++ L
Sbjct: 540 ELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRL 599
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPY 523
LGRAG+L DA + I +P P + +A A L++EP + Y
Sbjct: 600 LGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTY 659
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YAA+G ++VA +R+ MR+ GV+K+ G SW+E+K ++H F HP ++ I+
Sbjct: 660 VLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIIN 719
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
LE ++ K + GYVPD K + L HSE+LA+A+GL T G PI +M
Sbjct: 720 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 779
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR C DCH K IS I REI VRD RFH F +G CSCGDYW
Sbjct: 780 KNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 255/498 (51%), Gaps = 39/498 (7%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++L+ C+ R D G+++HA ++
Sbjct: 52 RLLQRCIARGDARAGRAVHARVVQR-----------------------------GGVAQL 82
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ F NVLL YA+ +A+AR+LFD +P+ ++VS+ TL+ YA G E A LF+ ++
Sbjct: 83 DTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + F L+ + + + + L +H A G D A V +SL+ YS G +
Sbjct: 143 REGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVS 202
Query: 182 EAKRVFYEMGEI-KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ VF G I KD V+W +MV Y ++ +AL F +M + + L S+L A
Sbjct: 203 HARCVFD--GIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L V G H +K+ H+G L+D+YAKC G + D VFE IP D++L
Sbjct: 261 AVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKC-GYIEDARTVFEIIPHDDVIL 319
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
W+ +IS Y+Q + ++QA F ++ R P++ S V+ AC+N++ LG+QIH L
Sbjct: 320 WSFLISRYAQSYQ-NEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLV 378
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK+ S + V NAL+ +Y+KC N+E++ +F + + N VS N++I GY Q G +A
Sbjct: 379 IKLGYES-ELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDA 437
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L +F+ M ++ T +TF SVL ACA+T + + S+++ F + + +ID
Sbjct: 438 LSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKS-TFNNDTIVCNSLID 496
Query: 480 LLGRAGKLTDAERLIEAM 497
+ G + DA ++ E++
Sbjct: 497 TYAKCGCIRDALKVFESI 514
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 142/315 (45%), Gaps = 18/315 (5%)
Query: 33 SAYLSNHFILLYSKCGCLSAAHHAFNQTQH---------ANVFSFNVLLAAYARQLRIAS 83
S+ + N F L C + A Q H + +F N L+ YA+ + +
Sbjct: 346 SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMEN 405
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
+ ++F + + VS+NT+I Y G E ALS+F++MR + T S ++ A +N
Sbjct: 406 SLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACAN 465
Query: 144 NLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ Q+H L F++ V NSL+ Y++ G + +A +VF + + D VSWN+
Sbjct: 466 TASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQC-DVVSWNA 524
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKS 260
++ Y H +AL+LF M + T ++L+ S + GL F++ +
Sbjct: 525 IISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDH 584
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVLWNTMISGYSQKEEYSDQAL 319
+ + ++ L + +G + D +K +IP P ++W ++S + + AL
Sbjct: 585 RIKPSMDHYTCIVRLLGR-AGRLNDALKFIGDIPSTPSPMVWRALLSSCVV---HKNVAL 640
Query: 320 GCFKKLNRVGYHPDD 334
G F + P D
Sbjct: 641 GKFSAEKVLEIEPQD 655
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 13/291 (4%)
Query: 215 ALQ-LFQEMVSLQL-GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGS 270
ALQ L E+ SL L LD Y A +L + D G HA +++ G ++ +
Sbjct: 29 ALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCAN 88
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
L++LYAK G + ++F+ +P+ ++V + T++ GY+ + + ++A G F++L R G+
Sbjct: 89 VLLNLYAKL-GPLAAARRLFDGMPERNMVSFVTLVQGYALRGGF-EEAAGLFRRLQREGH 146
Query: 331 HPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
+ ++ + +P L IHA K+ N V ++L+ YS CG + AR
Sbjct: 147 EVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAF-VGSSLIDAYSLCGAVSHAR 205
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA--CAH 447
+FD + + V+ +M++ Y+++ I +AL F M P SVL A C
Sbjct: 206 CVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLS 265
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + +G + +K + EP ++D+ + G + DA + E +P
Sbjct: 266 SAVLGKG-IHGCAVKTLCDTEPHVG--GALLDMYAKCGYIEDARTVFEIIP 313
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+ C + +H+L K+ + N I Y+KCGC+ A F
Sbjct: 455 TFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI 514
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +++ YA R A +LF+++ +P+ V++ L+S G L
Sbjct: 515 IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGL 574
Query: 117 SLFKDM 122
SLF M
Sbjct: 575 SLFNSM 580
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 359/659 (54%), Gaps = 69/659 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F I +P+L+ +NT+ +A D SAL L+ M + +T ++ A
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 142 SNNLCLIKQLH--CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------ 187
S +Q+H L + C D Y V+ SL++ Y +NG L++A +VF
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLY--VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 188 ------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ +KD VSWN+M+ Y + EAL+LF++M+ +
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D T+ ++++A + G Q H + GF N I + LIDLY+KC G++ +
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-GELETACGL 323
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE +P D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 350 -SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+G+ IH + +++ +N S+ +L+ MY+KCG++E A ++F+ + + S N+MI
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
G+A HG + LF M + I P +ITFV +LSAC+H+G + G+ F M +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------AN 510
P+ EHY CMIDLLG +G +AE +I M P + LKA A
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ +++EP N YV+L+NIYA++G+W EVA R L+ D+G++K PG S IE+ +H F+
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFG
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 682
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 683 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 142/281 (50%), Gaps = 37/281 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK G H ++ S LI+ + + + + VF+ I +P+L++WNTM G++
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F V+ +C+ G+QIH +K+ + +
Sbjct: 112 SSD-PVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD-L 169
Query: 370 SVNNALVAMYSKCGNLED-------------------------------ARRLFDRMPEH 398
V+ +L++MY + G LED A++LFD +P
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+MI+GYA+ G EAL LF+ M++TN+ P T V+V+SACA +G + G++
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ D GF + + +IDL + G+L A L E +P+
Sbjct: 290 LWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 35/267 (13%)
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKC------GNLEDARRLFDRMPEHNTVSLNSMIA 408
IHA IKI + + N AL + C L A +F + E N + N+M
Sbjct: 52 IHAQMIKIGLHNT----NYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFR 107
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G+A + AL+L+ M+ + P + TF VL +CA + EGQ+ + + G +
Sbjct: 108 GHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL-GCD 166
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP-------------FNPGSIALKAANHFLQL 515
+ ++ +I + + G+L DA ++ + P + A F ++
Sbjct: 167 LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF-----------SWIEVKK 564
+ V + + + YA +G ++E + + M V+ IE+ +
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSR 591
Q+H+++ + G +K ++ ++ S+
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLYSK 313
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/600 (37%), Positives = 324/600 (54%), Gaps = 69/600 (11%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N L L Q+H + G A V + ++ Y+ +G +D + VF +GE + +NSM
Sbjct: 84 NMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGE-PSSLLFNSM 142
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ AY ++ + + M S D +T +L + L + G H +++ G
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGL 202
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVF-------------------------------E 291
+ ++ + LI LY KC G++ D KVF E
Sbjct: 203 QFDLYVATSLIILYGKC-GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 261
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR--VGYHPDDCSFVCVISACSNLSP 349
+P ++V W TMISGYSQ + QAL F ++ + G P+ + + V+ AC+ LS
Sbjct: 262 RMPWRNIVSWTTMISGYSQ-SGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST 320
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSM 406
G+QIH L ++ + SN SV AL AMY+KCG+L DAR FD++ E N ++ N+M
Sbjct: 321 LERGRQIHELACRMGLNSNA-SVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTM 379
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I YA +G G++A+ F M++ I P +ITF +LS C+H+G V G KYF+ M +
Sbjct: 380 ITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYS 439
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
P EHY+C+ DLLGRAG+L +A +L+ MP G +A AA
Sbjct: 440 INPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAA 499
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
LEP N YV+L+N+YA +G+W+EV +R +++ +G +K PG SWIE+ + H+F
Sbjct: 500 RKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMF 559
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ D SHP KEI+ +LE + KMK AGY PD KE L+ HSEKLAVAF
Sbjct: 560 LGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAF 619
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G+L+T + V KNLRICGDCH A+ FIS I GRE+ VRD RFH FK G CSCGDYW
Sbjct: 620 GILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 169/316 (53%), Gaps = 14/316 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK+ V + GK +H L L+ + F Y++ I+LY KCG ++ A F+
Sbjct: 173 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 232
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N LLA Y + I +A +F+++P ++VS+ T+IS Y+ G + ALSLF
Sbjct: 233 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 292
Query: 121 DM--REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M + + T+ ++ A + + L +Q+H LA G + ASV +L Y++
Sbjct: 293 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 352
Query: 177 NGFLDEAKRVFYEMGEI-KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G L +A+ F ++ K+ ++WN+M+ AY + GL+A+ F+EM+ + D T
Sbjct: 353 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 412
Query: 236 SILT--AFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFE 291
+L+ + + L D+ GL++ H+ + + N + + + DL + +G + + K+
Sbjct: 413 GLLSGCSHSGLVDV--GLKYFNHM-STTYSINPRVEHYACVADLLGR-AGRLAEASKLVG 468
Query: 292 EIPQP-DLVLWNTMIS 306
E+P P +W ++++
Sbjct: 469 EMPMPAGPSIWGSLLA 484
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 158/352 (44%), Gaps = 54/352 (15%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A + T L L G Q HAH++ G + +GS ++ YA SGD+ + VF I
Sbjct: 74 APVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYAS-SGDIDSSVSVFNGIG 132
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLGK 353
+P +L+N+MI Y+ + ++++ + + ++ G+ D +F V+ S+ LS +GK
Sbjct: 133 EPSSLLFNSMIRAYA-RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGK 191
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD-------------------- 393
+H L ++I ++ + + V +L+ +Y KCG + DA ++FD
Sbjct: 192 CVHGLILRIGLQFD-LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKS 250
Query: 394 -----------RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML--ETNIPPTNITFVS 440
RMP N VS +MI+GY+Q G+ +AL LF+ M+ ++ + P +T +S
Sbjct: 251 GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 310
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
VL ACA + G++ + M G + + + G L DA + + N
Sbjct: 311 VLPACAQLSTLERGRQIHELACRM-GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369
Query: 501 PGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
N + + + YA+ G + + R M G+Q
Sbjct: 370 ----------------EKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQ 405
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 342/616 (55%), Gaps = 36/616 (5%)
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLH 152
+L+ +I+ Y + AL LFK M + D ++ A S L + +H
Sbjct: 267 ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIH 326
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
FD + + N+L+ Y + G L+EA VF M + +D +SWN+++ A+GQH +
Sbjct: 327 GFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM-QHRDVISWNTIIAAHGQHSQH 385
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L M + D + + L + E L G H+ +++SG + + + +
Sbjct: 386 PEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAI 445
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+D+Y C D +VF + D V WN MI+ Y+ + S +AL F+++ G+ P
Sbjct: 446 LDMYGSCKS-TDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMP 504
Query: 333 DDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D SFV +SAC+ S + GK +H + + SN ++V NA++ MY+K G L AR++
Sbjct: 505 DVISFVAALSACAAQASLAEGKLLHDRIRETGLESN-MTVANAVLNMYAKSGTLVLARKM 563
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F +MP + +S N MI+ +AQHG + LR F M P ++TFVSV+SAC+H G V
Sbjct: 564 FGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLV 623
Query: 452 AEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------ 504
+G Q + S++ D P EHY CM+DL+ RAGKL AE+ I A P P +
Sbjct: 624 KDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTML 683
Query: 505 -----------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A K+A H ++L P + YV+L+N+Y GK +E A IRRLM ++ ++K
Sbjct: 684 GASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRK 743
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
+P FS I VK+++H F D ++ EI LE +S +M +AGY PD
Sbjct: 744 EPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQ 803
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
K++ L +HSEKLA+AFGL+ST+ G + ++KNLR+CGDCH A KFIS I GREI VRD++
Sbjct: 804 KKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSH 863
Query: 662 RFHCFKDGRCSCGDYW 677
RFH F +G CSCGDYW
Sbjct: 864 RFHHFDNGTCSCGDYW 879
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 236/511 (46%), Gaps = 61/511 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L R L GK +HA K+ + ++ + + +Y CG L
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSL----------- 49
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A+ FD++P D +++ LI A+ GD+E AL LF+
Sbjct: 50 --------------------IDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRS 89
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGF--DHYASVNNSLLTCYSR 176
M+ + ++ A S + L+ +++H + DHY V+ +LL Y +
Sbjct: 90 MQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHY--VSTTLLHMYGK 147
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+++A++VF + K V WN+M+ AY Q +A+Q+F M+ + + T
Sbjct: 148 CSSVEDARKVFDGIRH-KRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIG 206
Query: 237 ILTAFTSLEDL-VGGL-------QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+L A + L+DL V L + H HL S F + L++ Y C GD+ +
Sbjct: 207 VLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF------ATALVNFYGSC-GDLEQAFR 259
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-L 347
F + +L+L MI+ Y+Q+E + D+AL FK + G D + + V++ACS
Sbjct: 260 AFSR-HRLELILATAMITQYTQRERW-DEALELFKVMLLEGVKLDRIACMAVLNACSGPR 317
Query: 348 SPSLGKQIHALTIKIEIRSNR-ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+ IH EIR +R ++ NAL+ MY KCG+LE+A +F M + +S N++
Sbjct: 318 GLEEGRIIHGFM--REIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTI 375
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IA + QH EAL L M + I+FV+ L CA + +A+G+ S + + G
Sbjct: 376 IAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVES-G 434
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + ++D+ G DA R+ AM
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 154/370 (41%), Gaps = 51/370 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C L G+ +H+ +++ + L N + +Y C A F
Sbjct: 406 SFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S+N ++ AYA Q R++S AL LF+
Sbjct: 466 KVRDQVSWNAMITAYAAQPRLSS------------------------------EALLLFQ 495
Query: 121 DMREKRF--DTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ F D F + A+ +L K LH G + +V N++L Y+++G
Sbjct: 496 QMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSG 555
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+++F +M + D +SWN M+ A+ QH + L+ F+ M + T S++
Sbjct: 556 TLVLARKMFGKM-PLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVV 614
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------LIDLYAKCSGDMRDCMKVFEE 292
+A + + G+Q L+ H I ++DL A+ +G + K
Sbjct: 615 SACSHGGLVKDGVQLFVSLL----HDFPTISPRAEHYYCMVDLIAR-AGKLDAAEKFIAA 669
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
P +PD V+ +TM+ G S+ + ++A + L + PD + V+ SNL +
Sbjct: 670 APLKPDRVIHSTML-GASKVHKDVERARKSAEHLMELT--PDRSAAYVVL---SNLYDEV 723
Query: 352 GKQIHALTIK 361
GK+ I+
Sbjct: 724 GKKDEGAKIR 733
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 313/543 (57%), Gaps = 40/543 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-HREGLEALQLFQEMVS 224
V+NSL + Y++ G LD+A R+F M +++ V+W ++V A EAL+ M
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGM-PVRNVVTWTTVVAALASADGRKQEALRFLVAMRR 164
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + YT +S+L A T+ L HA +K+G + + S LID Y K GD+
Sbjct: 165 DGVAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKL-GDLD 220
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+VF+E+ DLV+WN++I+G++Q + A+ F ++ G+ + + V+ AC
Sbjct: 221 GGRRVFDEMVTRDLVVWNSIIAGFAQSGD-GVGAIELFMRMKDAGFSSNQGTLTSVLRAC 279
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ + G+Q+HA +K + + ++NAL+ MY KCG+LEDA LF RMP+ + +S
Sbjct: 280 TGMVMLEAGRQVHAHVLKYD---RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISW 336
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
++M++G AQ+G +EALR+F+ M + P ++T V VL AC+H G V +G YF MK
Sbjct: 337 STMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKR 396
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIAL 506
+FG +PE EH++CM+DLLGRAGKL +A I M P S+A
Sbjct: 397 LFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAA 456
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA L+LEP + V+L+N YA +W + + MRDRG++K+PG SWIE++K++
Sbjct: 457 YAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRV 516
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLA 614
HVF+A D SHP I L + ++K GYVP KE L +HSEK+A
Sbjct: 517 HVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMA 576
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+ FG + G+PI +MKNLRICGDCH K +S GR I +RD RFH F+DG CSCG
Sbjct: 577 IVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCG 636
Query: 675 DYW 677
DYW
Sbjct: 637 DYW 639
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 157/323 (48%), Gaps = 32/323 (9%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ-HANVFSFNVLLAAYARQLRIASAR 85
++ V +AY + + + G L+A H + + ++VF + L+ AY + + R
Sbjct: 164 RDGVAPNAYTFSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGR 223
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
++FD++ DLV +N++I+ +A GD A+ LF M++ F ++ TL+ ++ A + +
Sbjct: 224 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMV 283
Query: 146 CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
L A +D ++N+LL Y + G L++A +F+ M + +D +SW++MV
Sbjct: 284 MLEAGRQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQ-RDVISWSTMVSG 342
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH-- 263
Q+ + +EAL++F M S + + T+ +L A + HA L++ G+H
Sbjct: 343 LAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACS-----------HAGLVEDGWHYF 391
Query: 264 -----------QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQK 311
+ H + ++DL + +G + + ++ + +PD V+W T++
Sbjct: 392 RSMKRLFGIQPEREH-HNCMVDLLGR-AGKLDEAVEFIHGMSLEPDSVIWRTLLGACRM- 448
Query: 312 EEYSDQALGCFKKLNRVGYHPDD 334
+ + +L + + PDD
Sbjct: 449 --HKNASLAAYAAREILKLEPDD 469
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +HA LK L N + +Y KCG L A F++
Sbjct: 271 TLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRM 328
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFD----QIPQPDLVSYNTLISAYADCGDTESAL 116
+V S++ +++ A+ + A ++FD Q P+ V+ ++ A + G E
Sbjct: 329 PQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGW 388
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M+ L G+ ++ C++ L R
Sbjct: 389 HYFRSMKR---------LFGIQPEREHHNCMVDLL-----------------------GR 416
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LDEA + M D V W +++ A H+ A +E++ L+
Sbjct: 417 AGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLE 466
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 332/593 (55%), Gaps = 69/593 (11%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K+LHC I G D S++N+L+ Y + G + +A +F ++ +D +SW S++ A Q
Sbjct: 23 KKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPH-RDPISWASILTANNQ 81
Query: 209 HREGLEALQLFQEMVSLQLGL--DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
L +F M Q GL D Y A ++ A L + G Q HA I S +
Sbjct: 82 ANLPHLTLSMFPAMFK-QDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140
Query: 267 HIGSGLIDLYAKC------------------------------SGDMRDCMKVFEEIPQP 296
+ S L+D+YAKC SG D +++F+++P
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH-PDDCSFVCVISACSNLSP-SLGKQ 354
+L+ W +ISG Q + D + F ++ G D +I A +NL+ LGKQ
Sbjct: 201 NLLSWTALISGLVQSGNWVD-SFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQ 259
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH L I + S+ + V+NALV MY+KC ++ A+++F RM + + VS S+I G AQHG
Sbjct: 260 IHCLVILLGYESS-LFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHG 318
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKDMFGFEPEGEH 473
+ EAL L+ ML T + P +TFV ++ AC+H G V++G+ +F SM+KD +G P +H
Sbjct: 319 LAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKD-YGINPSLQH 377
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y+C++DLL R+G L +AE LI+AMPF P I ++ A+H L L+
Sbjct: 378 YTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLK 437
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + Y++L+NIYA++ WE V+ +RRLM V+K+PG+S I + K+ VF+A + SH
Sbjct: 438 PEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSH 497
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P +EI LEE+ +MK+ GY+PD KE++L HSE+LAVA+GLL
Sbjct: 498 PAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIP 557
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + ++KNLR+CGDCH +KFIS I REI VRD R+H FKDG+CSC ++W
Sbjct: 558 GMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 7/312 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F ++K C + GK +HA ++ + V + + + +Y+KCG F+
Sbjct: 107 VFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSI 166
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S+ +++ YA+ R A QLF ++P +L+S+ LIS G+ + LF
Sbjct: 167 SSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFM 226
Query: 121 DMREKRFD-TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+MR K D D F LS +I AS+N L L KQ+HCL I G++ V+N+L+ Y++
Sbjct: 227 EMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKC 286
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+ AK++F M + +D VSW S++V QH EAL L+ M+S L + T +
Sbjct: 287 SDVLAAKKIFGRMVQ-RDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGL 345
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+ A + + + G F +IK G + + + L+DL ++ SG + + + + +P +
Sbjct: 346 IYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSR-SGHLEEAENLIKAMPFK 404
Query: 296 PDLVLWNTMISG 307
PD W ++S
Sbjct: 405 PDEATWAALLSA 416
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 227/525 (43%), Gaps = 88/525 (16%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ C + GK LH +K + LSN+ I +Y KCG + A + FN
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFN------- 62
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
Q+P D +S+ ++++A LS+F M
Sbjct: 63 ------------------------QLPHRDPISWASILTANNQANLPHLTLSMFPAM--- 95
Query: 126 RFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
F DG + A C I KQ+H I V +SL+ Y++ G
Sbjct: 96 -FKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCG 154
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM--------VSLQLGL- 229
D + VF + K+ +SW +M+ Y Q L+A+QLFQ+M +L GL
Sbjct: 155 LPDIGRVVFDSISS-KNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLV 213
Query: 230 -----------------------DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
D + L+SI+ A +L L G Q H +I G+ +
Sbjct: 214 QSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSL 273
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + L+D+YAKCS D+ K+F + Q D+V W ++I G +Q +++AL + ++
Sbjct: 274 FVSNALVDMYAKCS-DVLAAKKIFGRMVQRDIVSWTSIIVGTAQ-HGLAEEALSLYNRML 331
Query: 327 RVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G P++ +FV +I ACS++ S G+ IK + + L+ + S+ G+L
Sbjct: 332 STGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHL 391
Query: 386 EDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWM--LETNIPPTNITFVSVL 442
E+A L MP + + + ++++ H + +R+ + + L+ P T I ++
Sbjct: 392 EEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIY 451
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
++ A V++ ++ + M+ EP YSC++ LG+ ++
Sbjct: 452 ASAAMWESVSKVRRLMAAME--VKKEPG---YSCIV--LGKESQV 489
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 30/324 (9%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + H H+IK+G Q + + LI++Y KC G ++D + +F ++P D + W ++++ +
Sbjct: 22 GKKLHCHIIKTGIDQCKSLSNNLINMYGKC-GLIQDALNLFNQLPHRDPISWASILTANN 80
Query: 310 QKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q L F + + G PD F C++ AC+ L GKQ+HA I + +
Sbjct: 81 Q-ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDD 139
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ V ++LV MY+KCG + R +FD + N++S +MI+GYAQ G ++A++LF+ M
Sbjct: 140 DV-VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP 198
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK-------------DMFGFEPE---- 470
N+ +++ +++S +G + F M+ + G
Sbjct: 199 VKNL----LSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVL 254
Query: 471 --GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLAN 528
G+ C++ LLG L + L++ + S L A F ++ + V + +
Sbjct: 255 GLGKQIHCLVILLGYESSLFVSNALVDM--YAKCSDVLAAKKIFGRMVQRDIVSWTSIIV 312
Query: 529 IYAASGKWEEVATIRRLMRDRGVQ 552
A G EE ++ M G++
Sbjct: 313 GTAQHGLAEEALSLYNRMLSTGLK 336
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 251/733 (34%), Positives = 380/733 (51%), Gaps = 98/733 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLH--ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
T+ + C ++ L G +LH L+ + +L+NH I +Y KCG
Sbjct: 92 TYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCG---------- 141
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+A AR +FDQ+ ++VS+ LIS +A G SL
Sbjct: 142 ---------------------HLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSL 180
Query: 119 FKDMREKRFDTDGFTLSGLITA-SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS-R 176
F + F + F + L++A +++ Q+H +A+ D V NSL+T YS R
Sbjct: 181 FSGLL-AHFRPNEFAFASLLSACEEHDIKCGMQVHAVALKISLDANVYVANSLITMYSKR 239
Query: 177 NGF-------LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+GF D+A +F M E ++ VSWNSM+ + G +A+ LF M +G
Sbjct: 240 SGFGGGYAQTPDDAWTMFKSM-EFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGF 298
Query: 230 DMYTLASILTAFTSLED----------LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
D A++L+ F+SL + L Q H IKSG + + LI YA
Sbjct: 299 DR---ATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANL 355
Query: 280 SGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
G + DC ++F + Q D+V W +IS +++++ +QA F +L+R Y PD +F
Sbjct: 356 GGHISDCYRIFHDTSSQLDIVSWTALISVFAERD--PEQAFLLFCQLHRQSYLPDWYTFS 413
Query: 339 CVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
+ AC+ ++ IH+ IK + + + + NAL+ Y++CG+L + ++F+ M
Sbjct: 414 IALKACAYFVTEQHAMAIHSQVIKKGFQEDTV-LCNALMHAYARCGSLALSEQVFNEMGC 472
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
H+ VS NSM+ YA HG +AL LF+ M N+ P + TFV++LSAC+H G V EG K
Sbjct: 473 HDLVSWNSMLKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVKL 529
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------------- 504
F+ M D G P+ +HYSCM+DL GRAGK+ +AE LI MP P S+
Sbjct: 530 FNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHG 589
Query: 505 ----ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
A AA+ F +LEP+N++ YV ++NIY++ G + + IR M D V+K+PG SW+
Sbjct: 590 ETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWV 649
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVH 608
E+ KQ+H F + HP I + LE + ++K+ GYVP+ KE +L H
Sbjct: 650 EIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQLKEMGYVPELSLALYDTEVEHKEDQLFH 709
Query: 609 HSEKLAVAFGLLSTSY----GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
HSEK+A+ F +++ G I +MKN+RIC DCHN +K S + +EI VRD+ RFH
Sbjct: 710 HSEKMALVFAIMNEGSLPCGGNVIKIMKNIRICVDCHNFMKLASYLFQKEIVVRDSNRFH 769
Query: 665 CFKDGRCSCGDYW 677
FK CSC DYW
Sbjct: 770 RFKYATCSCNDYW 782
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/559 (39%), Positives = 323/559 (57%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K++HCL + GF+ V SL+ YSR G + +A+++F +M +D SWN+M+ Y Q
Sbjct: 14 KKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDM-PARDRGSWNAMISGYCQ 72
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EAL + EM + +D T+AS+L + D++ G H ++IK G +
Sbjct: 73 NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFV 132
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ LI++YAK G + KVF + + D+V WNT+I+GY+Q S+
Sbjct: 133 SNALINMYAK-FGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEEHE 190
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
P+ ++V ++ A S++ G +IH IK + S+ + V L+ MY KCG L+D
Sbjct: 191 EIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSD-VFVGTCLIDMYGKCGKLDD 249
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A LF ++P N+V N+MI+ Y HG G +AL LF M + P +ITFVS+LSAC+H
Sbjct: 250 AISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSH 309
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP------ 501
+G V++ Q F+MM++ +G +P +HY CM+DL GRAG+L A I+ MP P
Sbjct: 310 SGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWG 369
Query: 502 ---------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
G+I L A+ +++ N YV+L+NIYA GKWE V +R L RDRG
Sbjct: 370 ALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRG 429
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
++K PG+S I + ++ VF + +HP +EI+ L +++ K+K GYVPD
Sbjct: 430 LRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVE 489
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE L+ HSE+LA+A+G++STS PI + KNLR+CGDCH KFIS I REI VR
Sbjct: 490 EDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVR 549
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D+ RFH FK G CSCGDYW
Sbjct: 550 DSSRFHHFKGGTCSCGDYW 568
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 223/470 (47%), Gaps = 56/470 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V+K C DL+ GK +H L LK + +++ + +YS+ G
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGL--------------- 44
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ AR+LFD +P D S+N +IS Y G+ AL + +MR
Sbjct: 45 ----------------VGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRL 88
Query: 125 KRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ D T++ + + A ++ K +H I G + V+N+L+ Y++ G L
Sbjct: 89 EGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGH 148
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS-LQLGLDMYTLASILTAF 241
A++VF + IKD VSWN+++ Y Q+ EA++++ M ++ + T SIL A+
Sbjct: 149 AQKVFGLL--IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAY 206
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ + L G++ H +IK+ + + +G+ LID+Y KC G + D + +F ++P+ + V W
Sbjct: 207 SHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKC-GKLDDAISLFYQVPRKNSVPW 265
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
N MIS Y + ++AL F+++ PD +FV ++SACS+ S + +
Sbjct: 266 NAMISCYGVHGD-GEKALELFREMKAERVKPDHITFVSLLSACSH-SGLVSDAQWCFNMM 323
Query: 362 IEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG---I 415
E + S+ + +V ++ + G LE A +MP + + + +++ HG +
Sbjct: 324 EEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIEL 383
Query: 416 GMEAL-RLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKD 463
G A RLFE + N+ + +LS A+ GK S+ +D
Sbjct: 384 GKHASERLFE------VDSENVGYYVLLSNIYANVGKWEGVDDVRSLARD 427
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 146/315 (46%), Gaps = 47/315 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D+++GK +H +K+ + F ++SN I +Y+K G L A F
Sbjct: 97 TVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL 156
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-----PDLVSYNTLISAYADCGDTESA 115
+V S+N L+ YA+ + A +++ + + P+ ++ +++ AY+ G +
Sbjct: 157 I-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQG 215
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ + + + +D F V L+ Y
Sbjct: 216 MRIHGQVIKNCLYSDVF---------------------------------VGTCLIDMYG 242
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G LD+A +FY++ K+ V WN+M+ YG H +G +AL+LF+EM + ++ D T
Sbjct: 243 KCGKLDDAISLFYQVPR-KNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFV 301
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQN---SHIGSGLIDLYAKCSGDMRDCMKVFEE 292
S+L+A S LV Q+ ++++ + H G ++DL+ + +G++ ++
Sbjct: 302 SLLSA-CSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGC-MVDLFGR-AGELEMAFNFIKK 358
Query: 293 IP-QPDLVLWNTMIS 306
+P QPD W +++
Sbjct: 359 MPIQPDASAWGALLN 373
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/735 (33%), Positives = 375/735 (51%), Gaps = 108/735 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL +C G+ +HA K+ ++ N I LY +CG A F H +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISA--------------- 105
+FN L++ +A+ A ++F+++ PD V+ ++L++A
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 106 --------------------YADCGDTESAL----------------------------- 116
Y CGD E+AL
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 117 --SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
LF M+ + FT ++ + + L +Q+H L++ GF+ V+ L+
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G+L++A+RV EM + KD VSW SM+ Y QH +AL F+EM + D
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
LAS ++ + + GLQ HA + SG+ + I + L++LYA+C G +R+ FEE
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC-GRIREAFSSFEE 506
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
+ D + N ++SG++Q + ++AL F ++++ G + +FV +SA +NL+
Sbjct: 507 MELKDGITGNGLVSGFAQSGLH-EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQ 565
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIHA IK S V NAL+++Y KCG+ EDA+ F M E N VS N++I +
Sbjct: 566 GKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG G+EAL LF+ M + I P ++TF+ VL+AC+H G V EG YF M D +G P
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQ 514
+HY+C+ID+ GRAG+L A++ IE MP ++ + AA H L+
Sbjct: 685 DHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLE 744
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP ++ YV+L+N YA + KW +R++MRDRGV+K+PG SWIEVK +H F D
Sbjct: 745 LEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 804
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVP-------DKEKR------LVHHSEKLAVAFGLLS 621
HP+ ++I+N+L ++ ++ + GY DKE+ LV HSEKLAV FGL+S
Sbjct: 805 LHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV-HSEKLAVTFGLMS 863
Query: 622 TSYGEPILVMKNLRI 636
P+ V+KNLR+
Sbjct: 864 LPPCMPLRVIKNLRV 878
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 164/603 (27%), Positives = 289/603 (47%), Gaps = 47/603 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ Y++ + AR++F+++ D VS+ ++S YA G E AL L++ M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS ++++ + + +H GF V N+++T Y R G A+RV
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M +D V++N+++ + Q G AL++F+EM L D T++S+L A SL D
Sbjct: 201 FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L K+G + + L+DLY KC GD+ + +F + ++VLWN M+
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKC-GDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIR 365
+ Q + + ++ F ++ G P+ ++ C++ C+ LG+QIH+L++K
Sbjct: 319 AFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK G LE ARR+ + + E + VS SMIAGY QH +AL F+
Sbjct: 378 SD-MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + I P NI S +S CA + +G + + + + G+ + ++ +++L R G
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCG 495
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ + A + F ++E + + L + +A SG EE +
Sbjct: 496 RIRE------------------AFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMR 537
Query: 546 MRDRGVQ-----------KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
M GV+ + I+ KQ+H V + G H E+ N L + K
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGK-- 594
Query: 595 QAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG------EPILVMKNLRICGDCHNAIKFIS 648
G D + SE+ V++ + TS E + + ++ G N + FI
Sbjct: 595 -CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIG 653
Query: 649 AIA 651
+A
Sbjct: 654 VLA 656
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 193/391 (49%), Gaps = 9/391 (2%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVN 167
D LSLF D + + + A N ++ ++H A+ G Y V
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVG 80
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ YS+NG + A+RVF E+ +D VSW +M+ Y Q+ G EAL L+++M +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGV 139
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
Y L+S+L++ T E G HA K GF +G+ +I LY +C G R
Sbjct: 140 VPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC-GSFRLAE 198
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++P D V +NT+ISG++Q + + AL F+++ G PD + +++AC++L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQC-GHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G Q+H+ K I S+ I + +L+ +Y KCG++E A +F+ N V N M
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLM 316
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ + Q ++ LF M I P T+ +L C T ++ G++ S+ G
Sbjct: 317 LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT-G 375
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FE + +ID+ + G L A R++E +
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/609 (36%), Positives = 348/609 (57%), Gaps = 37/609 (6%)
Query: 99 YNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY 157
+N L+SA++ G +AL +F+ + R ++ FTL+ A +L + + A
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFA 135
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G+ H V ++LL YSR G ++EA RVF M KD V+W++MV + +EAL
Sbjct: 136 AGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPR-KDRVAWSTMVAGFVTAGRPVEALA 194
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
++ M + D + ++ A S + G H L++ + + L+ +YA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
K +G + +VF +P + V W+ +ISG++Q + +AL F++L G P +
Sbjct: 255 K-NGHLDVACQVFRMMPYRNDVTWSALISGFAQNGR-AVEALDLFRELQADGLQPCSWAL 312
Query: 338 VCVISACSNLS-PSLGKQIHALTIK-IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V + AC+++ LGK IH ++ +E + + A++ MYSKCG+LE AR+LF+++
Sbjct: 313 VSALLACASVGFLKLGKSIHGFILRRLEWQC---ILGTAVLDMYSKCGSLESARKLFNKL 369
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ V N++IA HG G +AL LF+ + ET I P + TF S+LSA +H+G V EG+
Sbjct: 370 SSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 429
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL--------- 506
+F M FG EP +HY C++DLL R+G + +A ++ +M P +IA+
Sbjct: 430 FWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEP-TIAIWVILLSGCL 488
Query: 507 ---------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
A L+L P + +++N+YAA+ KW++V IR+LM+D G +K PG+
Sbjct: 489 NNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGY 548
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------DKEKRLVH 608
S IEVK H FV ED SHP +EI + +++ +M++ GYVP D+++ L +
Sbjct: 549 SLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQLLSY 608
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSE+LA+AFGLL+TS G ++++KNLR+CGDCH+AIK+IS I REI VRD RFH FKD
Sbjct: 609 HSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKD 668
Query: 669 GRCSCGDYW 677
G CSCGDYW
Sbjct: 669 GACSCGDYW 677
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 38/307 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C+ + G S+H L++ + + + +Y+K G L A F + N
Sbjct: 214 VIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRN 273
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN-TLISAYADCGDTESALSLFKDMR 123
+++ L++ +A+ R A LF ++ L + L+SA C L L K +
Sbjct: 274 DVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASV-GFLKLGKSIH 332
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
GF L L + C+ + ++L YS+ G L+ A
Sbjct: 333 -------GFILRRL------------EWQCI-----------LGTAVLDMYSKCGSLESA 362
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+++F ++ +D V WN+++ G H G +AL LFQE+ + D T AS+L+A S
Sbjct: 363 RKLFNKLSS-RDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSAL-S 420
Query: 244 LEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPDLVL 300
LV G F + + G ++DL A+ SG + + + + +P + +
Sbjct: 421 HSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLAR-SGLVEEANDMLASMQTEPTIAI 479
Query: 301 WNTMISG 307
W ++SG
Sbjct: 480 WVILLSG 486
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 324/559 (57%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K H + G +N L+ YS+ G +D A++VF EM + VSWN+M+ + Q
Sbjct: 84 KACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-RSLVSWNTMIGSLTQ 142
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ E EAL L +M +T++S+L A + L HA IK+ N +
Sbjct: 143 NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFV 202
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+D+YAKC G M+D + VFE +P +V W++M +GY Q E Y +QAL F+K
Sbjct: 203 ATALLDVYAKC-GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY-EQALALFRKAWET 260
Query: 329 GYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G D VI AC+ L+ + GKQ++AL K SN I V ++L+ MY+KCG +E+
Sbjct: 261 GLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSN-IFVASSLIDMYAKCGGIEE 319
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ ++F + + N V N+MI+G ++H +E + LFE M + + P ++TFVSVLSAC H
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---- 503
G V +GQKYF +M P HYSCM+D L RAG++ +A LI +PFN +
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439
Query: 504 -------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+A AA +EP N+ Y++L+N+YAA+GKW+EVA +R+L+++
Sbjct: 440 SLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESD 499
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K+ G SWIE+K ++H+F+ + +HP I EI++ L E+ ++++ GY +
Sbjct: 500 VKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVG 559
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
K++ L HHSEKLA GLL PI +MKNLRICGDCH+ +K S R++ VR
Sbjct: 560 ESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVR 619
Query: 659 DTYRFHCFKDGRCSCGDYW 677
DT RFH FK+G CSCGD+W
Sbjct: 620 DTNRFHHFKNGCCSCGDFW 638
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 205/415 (49%), Gaps = 38/415 (9%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++LK C R+ L+ GK+ HA L + SN I +YSKCG
Sbjct: 69 EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCG--------------- 113
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ ARQ+FD++P LVS+NT+I + G+ AL L M+
Sbjct: 114 ----------------SVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 124 EKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ FT+S ++ A + L + LH AI D V +LL Y++ G +
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A VF M + + V+W+SM Y Q+ +AL LF++ L D + ++S++ A
Sbjct: 218 DAVCVFESMPD-RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICAC 276
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L ++ G Q +A L KSGF N + S LID+YAKC G + + KVF ++ + ++VLW
Sbjct: 277 AGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGG-IEESYKVFRDVEKRNVVLW 335
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
N MISG S + S + + F+K+ ++G P+D +FV V+SAC ++ G++ L
Sbjct: 336 NAMISGLS-RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMT 394
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHG 414
K + + + +V S+ G + +A L ++P + + S+ S++A HG
Sbjct: 395 KEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V+ C G ++ GK ++AL K+ + ++++ I +Y+KCG + ++ F + N
Sbjct: 272 VICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRN 331
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
V +N +++ +R R LF+++ Q P+ V++ +++SA G + F
Sbjct: 332 VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFD 391
Query: 121 DM-REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M +E + F S ++ S I + + L F+ AS+ SLL +G
Sbjct: 392 LMTKEHHLAPNVFHYSCMVDTLSRA-GQIFEAYDLISKLPFNASASMWGSLLASCRTHGN 450
Query: 180 LDEAKRVFYEMGEIKDEVSWN-----SMVVAYGQHREGLEALQLFQE 221
L+ A+ ++ +I+ S N +M A G+ E + +L +E
Sbjct: 451 LELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKE 497
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 355/651 (54%), Gaps = 50/651 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + R+ A +FD++ + ++VS+ L+ Y G+ + +L+L +M
Sbjct: 43 NDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVK 102
Query: 129 TDGFTLS------GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ FT S G + N + Q+H + + GF+ + V N+ + YS+ G +
Sbjct: 103 PNEFTFSTSLKACGALGVVENGM----QIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGM 158
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A++VF +M ++ VSWN+M+ + G ++L LFQ M D +T S L A
Sbjct: 159 AEQVFNKM-PFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACG 217
Query: 243 SLEDLVGGLQFHAHLIKSGF--HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+L + GG Q HA LI GF + I S ++DLYAKC G + + KVF+ I Q +L+
Sbjct: 218 ALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKC-GYLFEAQKVFDRIEQKNLIS 276
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
W+ +I G++Q E +A+ F++L + D ++ ++L+ GKQ+H
Sbjct: 277 WSALIQGFAQ-EGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYI 335
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+K+ + ISV N+++ MY KCG E+A RLF M N VS MI GY +HG+G +A
Sbjct: 336 LKVPSGLD-ISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKA 394
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ LF M I + ++++LSAC+H+G + E Q+YFS + + +P EHY+CM+D
Sbjct: 395 IHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVD 454
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
+LGRAG+L +A+ LIE M P I + +++ N V
Sbjct: 455 ILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVN 514
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YVM++NIYA +G W+E +R+L++ +G++K+ G SW+E+ K++H F D +HP+ ++I
Sbjct: 515 YVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKI 574
Query: 583 HNYLEEMSRKMK-QAGYV------------PDKEKRLVHHSEKLAVAFGLLSTSY---GE 626
H L+EM R++K + GY KE+ L HSEKLA+ L+ G
Sbjct: 575 HEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGG 634
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLR+CGDCH IK +S I + VRD RFH F+DG CSCGDYW
Sbjct: 635 VIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G Q+HA + + + I +NN L+ MY KC ++ A +FDRM E N VS +++ GY
Sbjct: 23 GLQVHAAAVNMGFGFDLI-MNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYL 81
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q G +L L M + + P TF + L AC G V G + M GFE
Sbjct: 82 QEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKS-GFEWVS 140
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ ID+ + G++ AE++ MPF
Sbjct: 141 VVGNATIDMYSKCGRIGMAEQVFNKMPF 168
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 318/527 (60%), Gaps = 35/527 (6%)
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAF 241
A +VF ++ + + WN+++ Y + + A L++EM VS + D +T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T++ D+ G H+ +I+SGF ++ + L+ LYA C GD+ KVF+++P+ DLV W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAW 190
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N++I+G+++ + ++AL + ++N G PD + V ++SAC+ + +LGK++H I
Sbjct: 191 NSVINGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ + N + +N L+ +Y++CG +E+A+ LFD M + N+VS S+I G A +G G EA+
Sbjct: 250 KVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 421 RLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LF++M T + P ITFV +L AC+H G V EG +YF M++ + EP EH+ CM+D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
LL RAG++ A I++MP P + + A LQLEP+++
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA+ +W +V IR+ M GV+K PG S +EV ++H F+ D SHP I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 583 HNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+EM+ +++ GYVP +KE +V+HSEK+A+AF L+ST PI V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+C DCH AIK +S + REI VRD RFH FK+G CSC DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 65/350 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ ++K D+ G+++H++ +++ Y+ N + LY+ CG
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------ 170
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ASA ++FD++P+ DLV++N++I+ +A+ G E AL+L+
Sbjct: 171 -------------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K DGFT+ L++A + L L K++H I G +N LL Y+R G
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM-YTLASI 237
++EAK +F EM + K+ VSW S++V + G EA++LF+ M S + L T I
Sbjct: 272 RVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMR 284
L A + H ++K GF + H G ++DL A+ +G ++
Sbjct: 331 LYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGC-MVDLLAR-AGQVK 377
Query: 285 DCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+ + +P QP++V+W T++ + + D L F ++ + P+
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTV---HGDSDLAEFARIQILQLEPN 424
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/717 (33%), Positives = 377/717 (52%), Gaps = 87/717 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFIL------LYSKCGCLSAAHH 55
R++L +C R L LHAL + S+ S H IL Y++ G L+AA
Sbjct: 6 LRRLLSSCAALRTLT---RLHALLI-----VSSSASCHHILSSCLATAYARAGDLAAAES 57
Query: 56 --AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP---QPDLVSYNTLISAYADCG 110
A T +++ ++N LLAA++R A ++F +P +PD ++ +SA A G
Sbjct: 58 TLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPPAARPDSTTFTLALSACARLG 117
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
D + + + D F S S+
Sbjct: 118 DLATGEVVTDRASGAGYGNDIFVCS---------------------------------SV 144
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y++ G +D+A +VF M + +D V+W++MV + + ++A++++ M L D
Sbjct: 145 LNLYAKCGAMDDAVKVFDRMRK-RDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEAD 203
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ ++ A + D G H +L++ + I + L+D+YAK +G +VF
Sbjct: 204 EVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAK-NGLFDQARRVF 262
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
E +P + V W+ +IS +Q +D+ALG F+ + G HP+ V + ACS+L
Sbjct: 263 ELMPHRNDVSWSALISQLAQYGN-ADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLL 321
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LGK IH ++ + +R+ V A++ MYSKCG+L A+ LFD++ + +S N MIA
Sbjct: 322 KLGKSIHGFILRT-LELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIAC 379
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
HG G +AL LF+ M + P + TF S+LSA +H+G V EG+ +F+ M + +G EP
Sbjct: 380 CGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEP 439
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHF 512
+H C++DLL R+G + +A L+ ++ P L A A
Sbjct: 440 GEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKI 499
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+L+P + +++N+YAA+ W +V +R+LM+D G +K PG S IE++ +H FV E
Sbjct: 500 LELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVME 559
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D SHP ++I + ++ +M++ GY+P KE+ L HSE+LA AFGLL
Sbjct: 560 DQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLL 619
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+TS G ++V+KNLR+CGDCH+AIK++S IA REI VRD RFH FKDG CSCGDYW
Sbjct: 620 NTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/631 (38%), Positives = 339/631 (53%), Gaps = 83/631 (13%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-TDGFTLSGLITASS 142
AR+LF I PD+ YNTLI +D +AL LF +MR K D F+ + L+ A++
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 143 NNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
N L QLHCLA+ G D + V +L++ Y+ L A++VF EM E + V+WN
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIE-PNIVAWN 176
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
++V A + +A Q+F+ M L TS ++ G
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNL--------------TSWNIMLAG---------- 212
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
Y K +G+++ +VF ++P D V W+TMI G++ ++D A
Sbjct: 213 ---------------YTK-AGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFND-AFA 255
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK---IEIRSNRISVNNALV 376
F+++ R G P++ S V+SAC+ G+ +H K ++I ISVNNAL+
Sbjct: 256 FFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQI----ISVNNALI 311
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
YSKCGNL+ AR +FD M + VS +MIAG A HG G EA+RLF M E+NI P +I
Sbjct: 312 DTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSI 371
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TF+S+L AC+H G V G YFS M + +G EP EHY CM+DL GRAGKL A +
Sbjct: 372 TFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQ 431
Query: 497 MPFNPGSIALKA--------ANHFL---------QLEPSNAVPYVMLANIYAASGKWEEV 539
MP +P I + N +L +L+P N+ +V+L+NIYA +GKW++V
Sbjct: 432 MPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDV 491
Query: 540 ATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE-MSRKMKQAGY 598
A +RR M + ++K PG+S IEV + ++ FVA + + + E H L E MSR + GY
Sbjct: 492 AALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGY 551
Query: 599 VP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
VP +KE + HSEKLAVAFG+ G I V+KNLRIC DCH +K
Sbjct: 552 VPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKL 611
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + EI VRD RFH F G CSC DYW
Sbjct: 612 ISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 41/346 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +LK R L G LH L + + ++ I +Y++C CL A F++
Sbjct: 108 SFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM 167
Query: 61 QHANVF-------------------------------SFNVLLAAYARQLRIASARQLFD 89
N+ S+N++LA Y + + AR++F
Sbjct: 168 IEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFM 227
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCL 147
++P D VS++T+I +A G+ A + F+++R + + +L+G+++ A +
Sbjct: 228 KMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEF 287
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+ LH GF SVNN+L+ YS+ G LD A+ VF M + VSW +M+
Sbjct: 288 GRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLR-RSAVSWTAMIAGMA 346
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT--SLEDLVGGLQFHAHLIKS-GFHQ 264
H G EA++LF EM + D T SIL A + L DL G + + ++ + G
Sbjct: 347 MHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDL--GCSYFSRMVNTYGIEP 404
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYS 309
++DLY + +G ++ ++P P+ ++W T++ S
Sbjct: 405 VIEHYGCMVDLYGR-AGKLQQAYDFVCQMPISPNDIVWRTLLGACS 449
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 233/655 (35%), Positives = 359/655 (54%), Gaps = 69/655 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +FD I +P+L+ +NT+ +A D SAL L+ M + +T L+ A +
Sbjct: 56 AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115
Query: 144 NLCLI--KQLH--CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------ 187
+ +Q+H L + C D Y V+ SL+ Y +NG ++A++VF
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLY--VHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYT 173
Query: 188 ------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ +KD VSWN+++ Y + EAL+LF+EM+ +
Sbjct: 174 ALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKP 233
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D T+ ++L+A + G Q H+ + GF N I + LIDLY KC G++ +
Sbjct: 234 DESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC-GEVETASGL 292
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE + D++ WNT+I GY+ Y +AL F+++ R G P++ + + ++ AC++L
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351
Query: 350 -SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+G+ IH + +++ SN S+ +L+ MY+KCG++E A+++FD M + S N+MI
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
G+A HG A +F M + I P +ITFV +LSAC+H+G + G+ F M + +
Sbjct: 412 FGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKI 471
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------AN 510
P+ EHY CMIDLLG +G +AE +I +M +P + LKA A
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQ 531
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ +++EP N+ YV+L+NIYA +G+W EVA R L+ D+G++K PG S IE+ +H F+
Sbjct: 532 NLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFG
Sbjct: 592 IGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 651
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
L+ST G + ++KNLR+C +CH A K IS I REI RD RFH F DG CSC
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 37/281 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S LI+ + + VF+ I +P+L++WNTM G++
Sbjct: 21 IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F ++ AC+ G+QIH +K+ + +
Sbjct: 81 SSD-PVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLD-L 138
Query: 370 SVNNALVAMYSKCGNLEDARRLFDR-------------------------------MPEH 398
V+ +L+AMY K G EDAR++FD+ +P
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N++I+GYA+ G EAL LF+ M++TN+ P T V+VLSACA + + G++
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S + D GF + + +IDL + G++ A L E + +
Sbjct: 259 SWIDD-HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 310/554 (55%), Gaps = 64/554 (11%)
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
++ +++ + + WN+ + ++ + +A+ LF + + D YT + +L A + L
Sbjct: 67 KLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRL 126
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN-- 302
D+ G H ++ K G N + + ++ LYA C G++ KVF+++PQ D++ WN
Sbjct: 127 LDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALC-GEIGVARKVFDKMPQRDVITWNIM 185
Query: 303 -----------------------------TMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+MI GY+Q + S +A+ F ++ G P+
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGK-SKEAIDLFLEMEDAGLLPN 244
Query: 334 DCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ + V V+ AC+++ LG++IH + + N I V N L+ MY KCG LEDA R+F
Sbjct: 245 EVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN-IRVCNTLIDMYVKCGCLEDACRIF 303
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
D M E VS ++MIAG A HG +AL LF M+ T + P +TF+ +L AC+H G V
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-------- 504
+G+KYF+ M +G P EHY CM+DL RAG L +A I MP P +
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 505 ---------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
A +A H +L+P N YV+L+NIYA +G+WE+VA +R+LMRDRGV+K P
Sbjct: 424 CKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTP 483
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KE 603
G+S I V+ ++ FVA D +HP +EI E++ ++MK GYVP+ KE
Sbjct: 484 GWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKE 543
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
K L HSEKLAV FGL+ T+ G I +MKNLR+C DCH A+K IS ++ REI VRD RF
Sbjct: 544 KFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRF 603
Query: 664 HCFKDGRCSCGDYW 677
HCFK+G CSCGDYW
Sbjct: 604 HCFKNGSCSCGDYW 617
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 160/308 (51%), Gaps = 8/308 (2%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK C D+ GK +H K + + +L N + LY+ CG + A F++ +
Sbjct: 119 VLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRD 178
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V ++N+++A + A +LF ++P+ ++ S+ ++I YA CG ++ A+ LF +M +
Sbjct: 179 VITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ T+ ++ A ++ NL L +++H + G++ V N+L+ Y + G L++
Sbjct: 239 AGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A R+F M E + VSW++M+ H +AL LF +M++ + + T IL A +
Sbjct: 299 ACRIFDNMEE-RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACS 357
Query: 243 SLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ + G ++ A + + + H G ++DL+++ +G +++ + +P P+ V
Sbjct: 358 HMGMVEKGRKYFASMTRDYGIVPRIEHYGC-MVDLFSR-AGLLQEAHEFIMNMPIAPNGV 415
Query: 300 LWNTMISG 307
+W ++ G
Sbjct: 416 VWGALLGG 423
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 187/419 (44%), Gaps = 47/419 (11%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS- 142
A+ +F + ++ +NT + ++A+ A+SLF +RE D +T S ++ A S
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 143 --------------------NNLCLIKQLHCLAIYCG--------FDHYASVN----NSL 170
+N+ L + L CG FD + N +
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ + G + A ++F EM E ++ SW SM+ Y Q + EA+ LF EM L +
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPE-RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPN 244
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T+ ++L A + +LV G + H +SG+ +N + + LID+Y KC G + D ++F
Sbjct: 245 EVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKC-GCLEDACRIF 303
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-P 349
+ + + +V W+ MI+G + D AL F K+ G P+ +F+ ++ ACS++
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAED-ALALFNKMINTGVKPNAVTFIGILHACSHMGMV 362
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIA 408
G++ A + RI +V ++S+ G L++A MP N V +++
Sbjct: 363 EKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLG 422
Query: 409 GYAQH---GIGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKD 463
G H + EA R + + P N + VLS A G+ + + +M+D
Sbjct: 423 GCKVHKNIKLAEEATRHL-----SKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRD 476
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 49/298 (16%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC---SGDMRDCMKVFEEI 293
+L FTS +L Q HAHL+K+ NS + S + A + +F+ +
Sbjct: 21 LLHNFTSPFELK---QLHAHLLKT----NSPLSSLPLSRVASVCAFNSSFSYAKLIFQLL 73
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD--DCSFVCVISACSNL-SPS 350
++ WNT + +++ + +D A+ F +L PD CSFV + ACS L
Sbjct: 74 DASEVTHWNTCLRSFAEGDSPAD-AISLFYRLREFDISPDHYTCSFV--LKACSRLLDVR 130
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN------ 404
GK +H K+ ++SN + + N +V +Y+ CG + AR++FD+MP+ + ++ N
Sbjct: 131 NGKIVHGYVEKLGLQSN-MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARL 189
Query: 405 -------------------------SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
SMI GYAQ G EA+ LF M + + P +T V
Sbjct: 190 VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVV 249
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+VL ACA G + G++ + G+E + +ID+ + G L DA R+ + M
Sbjct: 250 AVLVACADMGNLVLGRRIHD-FSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM 306
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 42/217 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C +LV G+ +H ++ + + N I +Y KCGCL
Sbjct: 247 TVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLE--------- 297
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++FD + + +VS++ +I+ A G E AL+LF
Sbjct: 298 ----------------------DACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFN 335
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA-------IYCGFDHYASVNNSLLTC 173
M + T G++ A S+ + K A I +HY ++
Sbjct: 336 KMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC----MVDL 391
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+SR G L EA M + V W +++ H+
Sbjct: 392 FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 342/629 (54%), Gaps = 40/629 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL Y +++FD++ +LVS+ +ISAYA G+ E A+ LF DM+
Sbjct: 126 NCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIR 185
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ L+ + + L L KQ+H I + +V ++ Y R G+L+ AK V
Sbjct: 186 PNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLV 245
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + ++ V+W ++V Y Q ++ AL+LF M + LD + + +L LED
Sbjct: 246 FDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLED 304
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G Q H+H++K G +G+ L+D Y KC GD+ + F I +P+ V W+ +IS
Sbjct: 305 WDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKC-GDIESAYRSFGRISEPNDVSWSALIS 363
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIR 365
G+SQ D + F L G + + V AC+ + ++G Q H IK +
Sbjct: 364 GFSQSGRLED-CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S + +A+V MYSKCG L+ ARR F+ + E + V+ ++I+GYA HG EAL F
Sbjct: 423 S-YLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + P +TF++VL+AC+H+G VAE ++Y M +G +P +HY CMID RAG
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 486 KLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLAN 528
L +A LI MPF P +++ K AA + +L+P + Y++L N
Sbjct: 542 LLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFN 601
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
+Y+A GKWEE +R+LM +R ++K+ SWI VK Q+H P+ + N ++
Sbjct: 602 LYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH--------RPV--RLLNEEDD 651
Query: 589 MSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+S + P ++++L+ HSEKLA+AFGL+ST PILV KNLR C DCH K +S
Sbjct: 652 VSCSL------PARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVS 705
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ GR+I VRD+ RFH FK G+CSC DYW
Sbjct: 706 MVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK C D GK +H+ +K + + Y KCG + +A+ +F +
Sbjct: 291 VFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S++ LIS ++ G E + +F
Sbjct: 351 SEPNDVSWS-------------------------------ALISGFSQSGRLEDCIKIFT 379
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R + + F + + A+ NL + Q H AI G Y ++++T YS+ G
Sbjct: 380 SLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCG 439
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD A+R F + E D V+W +++ Y H EAL F+ M S + + T ++L
Sbjct: 440 RLDYARRAFESIDE-PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVL 498
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
TA + + Q+ + + G +ID Y++ +G + + +++ +P +P
Sbjct: 499 TACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSR-AGLLXEALELINRMPFEP 557
Query: 297 DLVLWNTMISG 307
D + W +++ G
Sbjct: 558 DAMSWKSLLGG 568
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 336 SFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
S+ C+ AC L S + G+ IH ++ +++ S+ N L+ MY CG+ D +++FD
Sbjct: 89 SYQCLFEACGKLRSLADGRLIHD-RLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDE 147
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
M N VS +I+ YA++G +A+RLF M + I P + ++S+L +C
Sbjct: 148 MLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC 198
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/616 (34%), Positives = 342/616 (55%), Gaps = 70/616 (11%)
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL 151
P P + Y+++I+A A + A ++ + R DGF L
Sbjct: 60 PTPRV--YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLL----------------- 100
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
NSL+ Y + G + +A+ VF + +D VSW ++ Y Q+
Sbjct: 101 ----------------NSLIHMYCKCGAVSDARHVFDGI-PTRDVVSWTYLITGYAQNDM 143
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EAL L +M+ + +T S L A + G Q HA +K ++ ++GS
Sbjct: 144 PAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSA 203
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+D+YA+C M ++VF+ + + V WN +I+G+++K + + L F ++ R G+
Sbjct: 204 LLDMYARCQ-QMDMAIRVFDWLDSKNEVSWNALIAGFARKGD-GETTLMKFAEMQRNGFG 261
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
++ V SA + + G+ +HA IK + V N ++ MY+K G++ DAR+
Sbjct: 262 ATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAF-VANTILGMYAKSGSMVDARK 320
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FDR+ + + V+ N+M+ +AQ+G+G EA+ FE + + I ITF+SVL+AC+H G
Sbjct: 321 VFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGL 380
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP--------- 501
V EG++YF MMKD + EPE +HY +DLLGRAG L +A + MP P
Sbjct: 381 VKEGKQYFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 439
Query: 502 --------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
I AA+H +L+P + P V+L NIYA++G+W++ A +R++M+ GV+K
Sbjct: 440 GACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKK 499
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------D 601
+P SW+E++ +H+FVA+D +HP +EI+ EE++ ++K+AGYVP +
Sbjct: 500 EPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQE 559
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
+E +L +HSEK+A+AF L++ G I +MKN+RICGDCH+A +++S + REI VRDT
Sbjct: 560 RETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTN 619
Query: 662 RFHCFKDGRCSCGDYW 677
RFH F +G CSCGDYW
Sbjct: 620 RFHHFSNGSCSCGDYW 635
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 125/245 (51%), Gaps = 5/245 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V+ + LL YAR ++ A ++FD + + VS+N LI+ +A GD E+ L F +M+
Sbjct: 197 DVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQ 256
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F FT S + +A + L + +H I G A V N++L Y+++G +
Sbjct: 257 RNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMV 316
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A++VF + + +D V+WN+M+ A+ Q+ G EA+ F+E+ + L+ T S+LTA
Sbjct: 317 DARKVFDRVDQ-RDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTAC 375
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ + G Q+ + +DL + +G +++ + ++P +P +
Sbjct: 376 SHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGR-AGLLKEALIFVFKMPMEPTAAV 434
Query: 301 WNTMI 305
W ++
Sbjct: 435 WGALL 439
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H Q F N +L YA+ + AR++FD++ Q DLV++NT+++A+A G +
Sbjct: 289 HMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKE 348
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ-------LHCLAIYCGFDHYASVN 167
A++ F+++R+ + T ++TA S+ L+K+ + + DHY S
Sbjct: 349 AVAHFEEIRKYGIQLNQITFLSVLTACSHG-GLVKEGKQYFDMMKDYNVEPEIDHYVSFV 407
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+ L R G L EA ++M W +++ A H+
Sbjct: 408 DLL----GRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 446
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 254/725 (35%), Positives = 376/725 (51%), Gaps = 94/725 (12%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQ--------HANVFSFNVLLAAYARQLRIASARQLFD 89
N F+ L ++ L H NQT H ++ + L + I A LF
Sbjct: 11 NLFLTLINRVSTL----HQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFS 66
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR-FDTDGFTLSGLITASSNNLCLI 148
IP PDL YN LI A++ SA+SL+ +R+ + D FT + +I+ +S+ +
Sbjct: 67 TIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGL 126
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+I GF V ++++ CY + + A++VF M E +D V WN+MV +
Sbjct: 127 LLHA-HSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE-RDTVLWNTMVSGLVK 184
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ +F +MV +G D T+A++L L+DL G+ +K GFH ++++
Sbjct: 185 NSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+GL LY+KC G++ +F +I QPDLV +N MISGY+ E ++ ++ FK+L
Sbjct: 245 ITGLACLYSKC-GEIETARLLFGQIGQPDLVSYNAMISGYTCNNE-TESSVRLFKELLVS 302
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + S V +I L + IH K + SN SV+ AL +YS+ +E
Sbjct: 303 GEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNS-SVSTALTTVYSRLNEIES 361
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE----------------------- 424
AR LFD E + S N+MI+GYAQ+G+ +A+ LF+
Sbjct: 362 ARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQ 421
Query: 425 -----------------------WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ML + + PT +TF+SVL AC+H G V EG + F M
Sbjct: 422 LGALSLGKWVHDLINRESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSM 481
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SI 504
GFEP EHY+CM+DLLGRAG L A I MP PG ++
Sbjct: 482 VHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANL 541
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A A++ +L+P N YV+L+NIY+A + E A++R +++ R + K PG + IEV
Sbjct: 542 ARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVAN 601
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY----------VPDKEKRLVH--HSEK 612
+H+F + D SHP I+ LE+++ KM++AG+ V ++EK L+ HSEK
Sbjct: 602 TLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEK 661
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AFGL+++ G I ++KNLR+C DCHNA KFIS I R I VRD RFH FKDG CS
Sbjct: 662 LAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICS 721
Query: 673 CGDYW 677
CGDYW
Sbjct: 722 CGDYW 726
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 44/305 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +DL G + L +K AY+ LYSKCG + A F Q
Sbjct: 209 TVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQI 268
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N +IS Y +TES++ LFK
Sbjct: 269 GQPDLVSYN-------------------------------AMISGYTCNNETESSVRLFK 297
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + ++ GLI +L L + +H G +SV+ +L T YSR
Sbjct: 298 ELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN 357
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+ +F E E K SWN+M+ Y Q+ +A+ LFQEM ++ + T+ SIL
Sbjct: 358 EIESARLLFDESSE-KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSIL 416
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQN--------SHIGSGLIDLYAKCS--GDMRDCMK 288
+A L L G H + + F N S G + + CS G +R+ +
Sbjct: 417 SACAQLGALSLGKWVHDLINRESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDE 476
Query: 289 VFEEI 293
+F +
Sbjct: 477 IFRSM 481
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/646 (35%), Positives = 354/646 (54%), Gaps = 36/646 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F L+ AY+ + AR +FD I D V++ ++S Y++ E AL+ F MR
Sbjct: 182 NAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMR 241
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
F + F L+ + A+ ++ L K +H ++ +D V +LL Y++ G ++
Sbjct: 242 MTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIE 301
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A +F EM D + W+ ++ Y Q + +A ++F M+ + + ++L+ +L A
Sbjct: 302 DAHAIF-EMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQAC 360
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
++ L G Q H IK G+ +G+ L+D+YAKC +M + +++F + + V W
Sbjct: 361 ANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCR-NMENSLEIFSSLQDANEVSW 419
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
NT+I GY Q +++ AL F ++ +F V+ AC+N S QIH+L
Sbjct: 420 NTIIVGYCQSG-FAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIE 478
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K ++ I V N+L+ Y+KCG + DA ++F+ + E + VS NS+I+ YA HG AL
Sbjct: 479 KSTFNNDTI-VCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNAL 537
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+ M +++I ++TFVS+LS C TG V +G F+ M +P EHY+C++ L
Sbjct: 538 ELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRL 597
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPY 523
LGRAG+LTDA + I +P P + + AA L +EP + Y
Sbjct: 598 LGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTY 657
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YAA+G +EVA R+ MR+ GV+K+ G SW+E+K ++H F HP ++ I+
Sbjct: 658 VLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIIN 717
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
LE ++ K + GYVPD K + L HSE+LA+A+GL T G PI +M
Sbjct: 718 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 777
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR C DCH K IS I REI VRD RFH F++G CSCGDYW
Sbjct: 778 KNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 237/437 (54%), Gaps = 8/437 (1%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ F NVLL YA+ +A+AR+LFD +P+ + VS+ TL+ YA G+ E AL LF+ ++
Sbjct: 81 DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + F L+ + + + + L +H A G D A V +L+ YS G +
Sbjct: 141 REGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVC 200
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+ VF + KD V+W +MV Y ++ AL F +M + + L S L A
Sbjct: 201 HARCVFDGIVG-KDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAA 259
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L + G H +K+ + H+G L+D+YAKC GD+ D +FE IP D++LW
Sbjct: 260 VCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKC-GDIEDAHAIFEMIPHDDVILW 318
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
+ +IS Y+Q + ++QA F ++ R P++ S V+ AC+N++ LG+QIH L I
Sbjct: 319 SFLISRYAQSCQ-NEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAI 377
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ S + V NAL+ MY+KC N+E++ +F + + N VS N++I GY Q G +AL
Sbjct: 378 KLGYES-ELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDAL 436
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+F M ++ T +TF SVL ACA+T + + S+++ F + + +ID
Sbjct: 437 SVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKS-TFNNDTIVCNSLIDT 495
Query: 481 LGRAGKLTDAERLIEAM 497
+ G + DA ++ E++
Sbjct: 496 YAKCGFIRDALKVFESI 512
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 6/248 (2%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ +F N L+ YA+ + ++ ++F + + VS+NT+I Y G E ALS+F +M
Sbjct: 383 SELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEM 442
Query: 123 REKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R + T S ++ A +N + Q+H L F++ V NSL+ Y++ GF+
Sbjct: 443 RAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFI 502
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A +VF + E D VSWNS++ AY H AL+LF M + + T S+L+
Sbjct: 503 RDALKVFESIVEC-DVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSV 561
Query: 241 FTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDL 298
S + GL F++ ++ + + ++ L + +G + D +K +IP P
Sbjct: 562 CGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGR-AGRLTDALKFIGDIPSTPSP 620
Query: 299 VLWNTMIS 306
++W ++S
Sbjct: 621 MVWRALLS 628
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+ C + +H+L K+ + N I Y+KCG + A F
Sbjct: 453 TFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI 512
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
+V S+N +++AYA R +A +LFD++ + D+ V++ +L+S G L
Sbjct: 513 VECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGL 572
Query: 117 SLFKDM 122
LF M
Sbjct: 573 WLFNSM 578
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/688 (34%), Positives = 361/688 (52%), Gaps = 67/688 (9%)
Query: 44 YSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLI 103
++K + H +H + N L +QL R F+ Q VS++
Sbjct: 31 FTKTPQNPSPQHQNKHQKHPSFTPNNHLCLDQTQQLHAHITRTHFNHAQQ---VSFSPFE 87
Query: 104 SAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFD 161
S AL+ + MR+ + D F + ++ A S + K++H ++ G
Sbjct: 88 S------HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLV 141
Query: 162 HYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL-------- 213
V N+L+ YS G L A+ +F +M E +D VSW++M+ AY G
Sbjct: 142 SDVFVVNALMQMYSECGSLVSARLLFDKMSE-RDVVSWSTMIRAYITLFYGFSQRSIVSW 200
Query: 214 --------------EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
E +LF M+ + + T+ S++ + + + G + HA++++
Sbjct: 201 TAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILR 260
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+GF + + + L+D+Y KC G++R +F+ + D++ W MIS Y+Q D A
Sbjct: 261 NGFGMSLALATALVDMYGKC-GEIRSARAIFDSMKNKDVMTWTAMISAYAQAN-CIDYAF 318
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ G P++ + V ++S C+ N + +GK HA K + + I + AL+ M
Sbjct: 319 QLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVI-LKTALIDM 377
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+KCG++ A+RLF + + + N M+AGY HG G +AL+LF M + P +ITF
Sbjct: 378 YAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITF 437
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ L AC+H G V EG+ F M FG P+ EHY CM+DLLGRAG L +A ++IE+MP
Sbjct: 438 IGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMP 497
Query: 499 FNP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P ++ AA L LEP N V+++NIYAA+ +W +VA
Sbjct: 498 VTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAG 557
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
+R+ ++D G++K+PG S IEV +H F D +HP+I++I L EMS+K+K+AGY+PD
Sbjct: 558 MRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPD 617
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
KE L +HSEKLA+AFGL+ST+ G PI V+KNLRIC DCH K +S
Sbjct: 618 TSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSK 677
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I R I VRD RFH F++G CSCG YW
Sbjct: 678 IYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 196/413 (47%), Gaps = 16/413 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK C GK +H +KN + ++ N + +YS+CG L +A F++ +
Sbjct: 115 VLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERD 174
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
V S++ ++ AY LF Q +VS+ +I+ Y C D E LF M E
Sbjct: 175 VVSWSTMIRAYI---------TLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIE 225
Query: 125 KRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + T+ LI + + L K+LH + GF ++ +L+ Y + G +
Sbjct: 226 ENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRS 285
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M KD ++W +M+ AY Q A QLF +M + + T+ S+L+
Sbjct: 286 ARAIFDSMKN-KDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCA 344
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
L G FHA++ K G + + + LID+YAKC GD+ ++F E D+ WN
Sbjct: 345 VNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKC-GDISGAQRLFSEAIDRDICTWN 403
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIK 361
M++GY Y ++AL F ++ +G P+D +F+ + ACS+ + GK + I
Sbjct: 404 VMMAGYGM-HGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIH 462
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQH 413
++ +V + + G L++A ++ + MP +++ +M+A H
Sbjct: 463 DFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 42/233 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK HA K V L I +Y+KCG +S A F++
Sbjct: 335 TMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEA 394
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ ++NV++A Y G E AL LF
Sbjct: 395 IDRDICTWNVMMAGYGMH-------------------------------GYGEKALKLFT 423
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTC 173
+M + T G + A S+ ++ K +H + +HY + + L
Sbjct: 424 EMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLL--- 480
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
R G LDEA ++ M + W +M+ A H+ +E+++L+
Sbjct: 481 -GRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALE 532
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 324/559 (57%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K H + G +N L+ YS+ G +D A++VF EM + VSWN+M+ + Q
Sbjct: 84 KACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-RSLVSWNTMIGSLTQ 142
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ E EAL L +M +T++S+L A + L HA IK+ N +
Sbjct: 143 NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFV 202
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+D+YAKC G M+D + VFE +P +V W++M +GY Q E Y +QAL F+K
Sbjct: 203 ATALLDVYAKC-GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY-EQALALFRKAWET 260
Query: 329 GYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G D VI AC+ L+ + GKQ++AL K SN I V ++L+ MY+KCG +E+
Sbjct: 261 GLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSN-IFVASSLIDMYAKCGGIEE 319
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ ++F + + N V N+MI+G ++H +E + LFE M + + P ++TFVSVLSAC H
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---- 503
G V +GQKYF +M P HYSCM+D L RAG++ +A LI +PFN +
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439
Query: 504 -------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+A AA +EP N+ Y++L+N+YAA+GKW+EVA +R+L+++
Sbjct: 440 SLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESD 499
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K+ G SWIE+K ++H+F+ + +HP I EI++ L E+ ++++ GY +
Sbjct: 500 VKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVG 559
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
K++ L HHSEKLA GLL PI +MKNLRICGDCH+ +K S R++ VR
Sbjct: 560 ESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVR 619
Query: 659 DTYRFHCFKDGRCSCGDYW 677
DT RFH FK+G CSCGD+W
Sbjct: 620 DTNRFHHFKNGCCSCGDFW 638
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 205/415 (49%), Gaps = 38/415 (9%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++LK C R+ L+ GK+ HA L + SN I +YSKCG
Sbjct: 69 EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCG--------------- 113
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ ARQ+FD++P LVS+NT+I + G+ AL L M+
Sbjct: 114 ----------------SVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157
Query: 124 EKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ FT+S ++ A + L + LH AI D V +LL Y++ G +
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A VF M + + V+W+SM Y Q+ +AL LF++ L D + ++S++ A
Sbjct: 218 DAVCVFESMPD-RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICAC 276
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L ++ G Q +A L KSGF N + S LID+YAKC G + + KVF ++ + ++VLW
Sbjct: 277 AGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGG-IEESYKVFRDVEKRNVVLW 335
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
N MISG S + S + + F+K+ ++G P+D +FV V+SAC ++ G++ L
Sbjct: 336 NAMISGLS-RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMT 394
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHG 414
K + + + +V S+ G + +A L ++P + + S+ S++A HG
Sbjct: 395 KEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V+ C G ++ GK ++AL K+ + ++++ I +Y+KCG + ++ F + N
Sbjct: 272 VICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRN 331
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
V +N +++ +R R LF+++ Q P+ V++ +++SA G F
Sbjct: 332 VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFD 391
Query: 121 DM-REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M +E + F S ++ S I + + L F+ AS+ SLL +G
Sbjct: 392 LMTKEHHLAPNVFHYSCMVDTLSRA-GQIFEAYDLISKLPFNASASMWGSLLASCRTHGN 450
Query: 180 LDEAKRVFYEMGEIKDEVSWN-----SMVVAYGQHREGLEALQLFQE 221
L+ A+ ++ +I+ S N +M A G+ E + +L +E
Sbjct: 451 LELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKE 497
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 306/541 (56%), Gaps = 63/541 (11%)
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
SWNS++ + + +EAL+ F M L L + T + + ++L DL G Q H
Sbjct: 43 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 102
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE---- 313
+ GF + + S L+D+Y+KC G++RD +F+EI ++V W +MI+GY Q ++
Sbjct: 103 LIFGFEPDLFVSSALVDMYSKC-GELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRA 161
Query: 314 --------------------------YSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN 346
S +++ F ++ + G + + + V+ AC++
Sbjct: 162 LRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 221
Query: 347 L-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
S LGK IH IK+ + SN + V +++ MY KCG +E AR+ FDRM E N S ++
Sbjct: 222 SGSQRLGKCIHDQVIKMGLESN-VFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 280
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
M+AGY HG EAL +F M + P ITFVSVL+AC+H G + EG +F M F
Sbjct: 281 MVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEF 340
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA----------------- 508
EP EHY CM+DLLGRAG L +A LI+ M P + A
Sbjct: 341 DVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEIS 400
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A +L+P N YV+L+NIYA +G+WE+V +R LM++ G+ K PGFS +++K ++HV
Sbjct: 401 ARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHV 460
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D HP ++I+ YLE++S K+++ GYVPD KE L HSEKLAVA
Sbjct: 461 FLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVA 520
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FG+++T G I ++KNLR+CGDCH AIKFIS I REI VRD+ RFH F+DG CSCGDY
Sbjct: 521 FGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDY 580
Query: 677 W 677
W
Sbjct: 581 W 581
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 171/359 (47%), Gaps = 34/359 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K+C DL +G+ H L ++S+ + +YSKCG L A F++
Sbjct: 78 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 137
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H N+ S+ ++ Y + A ++FD + + D++S+N++I+ YA G + ++ +F
Sbjct: 138 SHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 197
Query: 121 DM-REKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M ++ + + TLS ++ A S + L K +H I G + V S++ Y +
Sbjct: 198 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 257
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ A++ F M E K+ SW++MV YG H EAL++F EM + + T S+
Sbjct: 258 GKVEMARKAFDRMRE-KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 316
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQ-------------NSHIGSGLIDLYAKCSGDMR 284
L A + HA L++ G+H H G ++DL + +G ++
Sbjct: 317 LAACS-----------HAGLLEEGWHWFKAMSHEFDVEPGVEHYGC-MVDLLGR-AGYLK 363
Query: 285 DCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ + + + +PD V+W ++ G + + D +KL + P +C + ++S
Sbjct: 364 EAFDLIKGMKLRPDFVVWGALL-GACRMHKNVDLGEISARKLFELD--PKNCGYYVLLS 419
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 133/333 (39%), Gaps = 60/333 (18%)
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+T +I R S N L +++K + + N S NS+IA A+ G
Sbjct: 10 VITFSWKIYRRRYSNNPNLTTLFNK------------YVDKTNVFSWNSVIAELARSGDS 57
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFEPEG 471
+EALR F M + ++ P TF + +C+ H+G+ A Q +FGFEP+
Sbjct: 58 VEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQAL------IFGFEPDL 111
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMP-------------FNPGSIALKAANHFLQLEPS 518
S ++D+ + G+L DA L + + + A +A F +
Sbjct: 112 FVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAER 171
Query: 519 NAVPYVMLANIYAASG-KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ + + + +YA +G E + R+++D + ++ + + + + A GS
Sbjct: 172 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN----YNAVTLSAVL-LACAHSGSQR 226
Query: 578 MIKEIHNYLEEMSRKMK------------QAGYVPDKEKRLVHHSEKLAVAFGLLSTSYG 625
+ K IH+ + +M + + G V K EK ++ + YG
Sbjct: 227 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 286
Query: 626 ------EPILVMKNLRICGDCHNAIKFISAIAG 652
E + V + + G N I F+S +A
Sbjct: 287 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 319
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/710 (32%), Positives = 364/710 (51%), Gaps = 73/710 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPF-SAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+F +L C L G+ +H+L L + + ++ + +Y KCG
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCG----------- 487
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALS 117
IA A +F ++P P LV++N ++ AYA ++ A
Sbjct: 488 --------------------SIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527
Query: 118 LFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFD---HYASVNNSLLTCY 174
+M + D + + ++++ C Q + C + A + +L++ +
Sbjct: 528 ALMEMLQGGVLPDALSFTSVLSS-----CYCSQEAQVLRMCILESGYRSACLETALISMH 582
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
R L++A+ VF EM D VSW +MV A ++R+ E LF+ M + D +TL
Sbjct: 583 GRCRELEQARSVFDEMDH-GDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTL 641
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A+ L L G HA + + G + + + L+++Y+ C GD R+ + FE +
Sbjct: 642 ATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNC-GDWREALSFFETMK 700
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGK 353
DLV WN M + Y+Q + +A+ F+ + G PD +F ++ + S GK
Sbjct: 701 ARDLVSWNIMSAAYAQAG-LAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGK 759
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
H L + + S+ +SV LV +Y+KCG L++A LF + V LN++I AQH
Sbjct: 760 LFHGLAAESGLDSD-VSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQH 818
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G EA+++F M + + P T VS++SAC H G V EG F MK+ FG P EH
Sbjct: 819 GFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEH 878
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLE 516
Y+C +DLLGRAG+L AE++I MPF ++ + A L+L+
Sbjct: 879 YACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELD 938
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ +V+L+NIY A+GKW++ R+ + D+ V+ PG SW+E+ KQ+H FVA D SH
Sbjct: 939 PHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSH 998
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD---------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
P EI+ L+++ M++AGY D KEK L +HSE++A+AFGL++T
Sbjct: 999 PQTDEIYVVLDKLELLMRRAGYEADKGLDAEDELKEKALGYHSERIAIAFGLIATPPDTT 1058
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ ++KNLR+CGDCH A K+IS I GREI VRD+ RFH F +G CSC D W
Sbjct: 1059 LKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 245/517 (47%), Gaps = 52/517 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L++CV DL GK H L + +L N I +Y +CG L AH
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAH------- 80
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+F ++ + ++VS+ LISA A G A +LF+
Sbjct: 81 ------------------------AIFSKMEERNVVSWTALISANAQSGAFARAFALFRT 116
Query: 122 M-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS----VNNSLLTCY 174
M E + +TL ++ A +N +L + + +H + G + ++ V N+++ Y
Sbjct: 117 MLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMY 176
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYT 233
++ G ++A VF + E KD VSW +M AY Q R +AL++F+EM+ L ++ T
Sbjct: 177 AKCGSPEDAIAVFLTIPE-KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVIT 235
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ L A TSL D G H+ L ++G + G+ LI++Y KC GD VF+ +
Sbjct: 236 FITALGACTSLRD---GTWLHSLLHEAGLGFDPLAGNALINMYGKC-GDWEGAYGVFKAM 291
Query: 294 P---QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+ DLV WN MIS + + D A+ F++L G P+ + + +++A +
Sbjct: 292 ASRQELDLVSWNAMISASVEAGRHGD-AMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350
Query: 351 LG--KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMI 407
G ++ H + + + V NA+++MY+KCG A +F R+ + + +S N+M+
Sbjct: 351 FGAARKFHGRIWESGYLRD-VVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTML 409
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+ + F ML I P ++F+++L+AC+++ + G+K S++
Sbjct: 410 GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRD 469
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
E + ++ + G+ G + +AE + + MP S+
Sbjct: 470 YVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSL 506
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 150/635 (23%), Positives = 267/635 (42%), Gaps = 110/635 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA----LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T +L C RDL G+S+HA L L+ + + N I +Y+KCG A
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188
Query: 57 FNQTQHANVFSFNVLLAAYARQLR-----IASARQLFDQIPQPDLVSY------------ 99
F +V S+ + AYA++ R + R++ Q P+++++
Sbjct: 189 FLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD 248
Query: 100 --------------------NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
N LI+ Y CGD E A +FK M ++ + D + + +I+
Sbjct: 249 GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQ-ELDLVSWNAMIS 307
Query: 140 AS----------------------SNNLCLIKQLHCLAIYCGFDHYAS------------ 165
AS N++ LI L+ LA G D A+
Sbjct: 308 ASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA-SGVDFGAARKFHGRIWESGY 366
Query: 166 -----VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
V N++++ Y++ GF A VF + D +SWN+M+ A + + + F
Sbjct: 367 LRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFH 426
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH-LIKSGFHQNSHIGSGLIDLYAKC 279
M+ + + + +IL A ++ E L G + H+ L + + S + + L+ +Y KC
Sbjct: 427 HMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKC 486
Query: 280 SGDMRDCMKVFEEIPQP--DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
G + + VF+E+P P LV WN M+ Y+Q + S +A G ++ + G PD SF
Sbjct: 487 -GSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDR-SKEAFGALMEMLQGGVLPDALSF 544
Query: 338 VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
V+S+C S Q+ + I +E + AL++M+ +C LE AR +FD M
Sbjct: 545 TSVLSSC---YCSQEAQVLRMCI-LESGYRSACLETALISMHGRCRELEQARSVFDEMDH 600
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS +M++ A++ E LF M + P T + L C + + G+
Sbjct: 601 GDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKII 660
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEP 517
+ + ++ G E + + ++++ G +A E M +
Sbjct: 661 HACVTEI-GLEADIAVENALLNMYSNCGDWREALSFFETM------------------KA 701
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ V + +++ YA +G +E + R M+ GV+
Sbjct: 702 RDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVK 736
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
RV D + ++ +C + + + GK+ H L + + + + N L+ MY +CG+L
Sbjct: 18 RVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQH-LFLGNCLINMYVRCGSL 76
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LETNIPPTNITFVSVLSA 444
E+A +F +M E N VS ++I+ AQ G A LF M LE++ P + T V++L+A
Sbjct: 77 EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS----CMIDLLGRAGKLTDAERLIEAMP 498
CA++ +A G+ +M+ ++ G E E + MI++ + G DA + +P
Sbjct: 137 CANSRDLAIGRSIHAMIWEL-GLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP 193
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 362/672 (53%), Gaps = 41/672 (6%)
Query: 43 LYSKCGCLSAA------HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
L+ CG L A H+ + ++N F N +L Y +A + FD+I DL
Sbjct: 86 LFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDL 145
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCL 154
S+ T+ISAY + G + A+ LF M + + S LI A + L L KQ+H
Sbjct: 146 SSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQ 205
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
I F S+ + Y + G+LD A+ +M K V+ ++V Y Q +
Sbjct: 206 LIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTR-KSAVACTGLMVGYTQAARNRD 264
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL LF +M+S + LD + + IL A +L DL G Q H++ IK G +G+ L+D
Sbjct: 265 ALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 324
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
Y KC+ + FE I +P+ W+ +I+GY Q ++ D+AL FK + G +
Sbjct: 325 FYVKCA-RFEAARQAFESIHEPNDFSWSALIAGYCQSGKF-DRALEVFKTIRSKGVLLNS 382
Query: 335 CSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ + ACS +S + G QIHA IK + + +S +A++ MYSKCG ++ A + F
Sbjct: 383 FIYNNIFQACSAVSDLICGAQIHADAIKKGLVA-YLSGESAMITMYSKCGKVDYAHQAFL 441
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
+ + +TV+ ++I +A HG EALRLF+ M + + P +TF+ +L+AC+H+G V E
Sbjct: 442 AIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKE 501
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK------ 507
G+++ M D +G P +HY+CMID+ RAG L +A +I +MPF P ++ K
Sbjct: 502 GKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGC 561
Query: 508 -----------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
AA++ +L+P ++ YV++ N+YA +GKW+E A R++M +R ++K+
Sbjct: 562 WSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVS 621
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-----------VPDKEKR 605
SWI VK ++H FV D HP ++I++ L+E++ K+ +++ +
Sbjct: 622 CSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKDQ 681
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
L+ HSE+LA+A+GL+ T+ PI+V KN R C DCH K +S + GRE+ VRD RFH
Sbjct: 682 LLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHH 741
Query: 666 FKDGRCSCGDYW 677
G CSC DYW
Sbjct: 742 INSGECSCRDYW 753
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +LK C DL TGK +H+ +K + + + Y KC AA AF
Sbjct: 283 VFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESI 342
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N FS++ L+A Y + G + AL +FK
Sbjct: 343 HEPNDFSWSALIAGYCQS-------------------------------GKFDRALEVFK 371
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R K + F + + A S ++L Q+H AI G Y S ++++T YS+ G
Sbjct: 372 TIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCG 431
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A + F + + D V+W +++ A+ H + EAL+LF+EM + ++ T +L
Sbjct: 432 KVDYAHQAFLAIDK-PDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLL 490
Query: 239 TAFTSLEDLVGGLQFHAHLI-KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + + G QF + K G + + +ID+Y++ +G + + ++V +P +P
Sbjct: 491 NACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSR-AGLLLEALEVIRSMPFEP 549
Query: 297 DLVLWNTMISG 307
D++ W +++ G
Sbjct: 550 DVMSWKSLLGG 560
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 345/576 (59%), Gaps = 36/576 (6%)
Query: 134 LSGLITASSNNLCLIKQLHCLA--IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
L L+ +S+ N I+ + C A I G +N L+ YS+ G ++ A+++F EM
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEM- 108
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
++ VSWN+MV ++ Q+ + +AL LF +M +T++S++ A + +
Sbjct: 109 PVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK 168
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q H +K+ N +G+ L+D+YAKC G ++D VFE +P+ V W++M++GY Q
Sbjct: 169 QLHGFALKTALDSNVFVGTALLDVYAKC-GLVKDANLVFECMPERSDVTWSSMVAGYVQN 227
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRIS 370
E Y ++AL F + +G + + +SAC+ + + GKQ+ A++ K I SN I
Sbjct: 228 ELY-EEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN-IF 285
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V ++L+ MY+KCG +E+A +F + E N V N++++G+++H +EA+ FE M +
Sbjct: 286 VISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG 345
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P +IT++SVLSAC+H G V +G+KYF +M + P HYSCM+D+LGRAG L +A
Sbjct: 346 ICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 405
Query: 491 ERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ I+ MPF+ + +A AA H ++EP NA +V+L+NIYAA+
Sbjct: 406 KDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAAN 465
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
+WEEVA R L+++ +K+ G SWIE+K ++H F+ + +HP I EI+ LE++ +M
Sbjct: 466 DRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEM 525
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K+ GY K++ L HHSEKLA+ FG++ +G PI +MKNLRICGDCH
Sbjct: 526 KKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCH 585
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +K S+I REI VRDT RFH FK+G CSCG++W
Sbjct: 586 SFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 194/344 (56%), Gaps = 6/344 (1%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A+ + N+L+ Y++ + SAR+LFD++P LVS+NT++ ++ GD E AL LF M
Sbjct: 80 ADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQM 139
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+++ FT+S ++ A + C+ KQLH A+ D V +LL Y++ G +
Sbjct: 140 QKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLV 199
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A VF M E + +V+W+SMV Y Q+ EAL LF ++ L + +T++S L+A
Sbjct: 200 KDANLVFECMPE-RSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 258
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L+ G Q A K+G N + S LID+YAKC G + + VF + + ++VL
Sbjct: 259 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKC-GIIEEAYTVFSSVEEKNVVL 317
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WN ++SG+S + S +A+ F+K+ ++G P+D +++ V+SACS+L G++ L
Sbjct: 318 WNAILSGFS-RHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLM 376
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
I++ S + + +V + + G L +A+ DRMP T S+
Sbjct: 377 IRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASM 420
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 3/206 (1%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A +NVF LL YA+ + A +F+ +P+ V+++++++ Y E A
Sbjct: 174 ALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEA 233
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTC 173
L LF + + + FT+S ++A + LI KQ+ ++ G V +SL+
Sbjct: 234 LVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDM 293
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G ++EA VF + E K+ V WN+++ + +H LEA+ F++M + + + T
Sbjct: 294 YAKCGIIEEAYTVFSSVEE-KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIK 259
S+L+A + L + G ++ +I+
Sbjct: 353 YISVLSACSHLGLVEKGRKYFDLMIR 378
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+ GK + A+ K + + ++ + I +Y+KCG + A+ F+ + NV +N +L+ +
Sbjct: 266 IEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGF 325
Query: 76 ARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDM 122
+R +R A F+++ Q P+ ++Y +++SA + G E F M
Sbjct: 326 SRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLM 376
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 312/545 (57%), Gaps = 44/545 (8%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ---HREGLEALQLFQEM 222
V+NSL++ Y++ G LD+A R+F M E ++ V+W ++V A +E EAL+ M
Sbjct: 117 VSNSLVSMYAKFGLLDDALRLFDRMPE-RNVVTWTTVVAALANADGRKE--EALRFLVAM 173
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ + YT +S+L A + L HA +K G + + S LID Y K GD
Sbjct: 174 WRDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKL-GD 229
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +VF+E+ DLV+WN++I+G++Q + A+ F ++ G+ + + V+
Sbjct: 230 LDGGRRVFDEMVTRDLVVWNSIIAGFAQSGD-GVGAIELFMRMKDAGFSANQGTLTSVLR 288
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
AC+ + G+Q+HA +K E + ++NAL+ MY KCG+LEDA LF RMP+ + +
Sbjct: 289 ACTGMVMLEAGRQVHAHVLKYE---RDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVI 345
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S ++MI+G AQ+G EALR+F+ M + P IT V VL AC+H G V +G YF M
Sbjct: 346 SWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSM 405
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSI 504
K +FG +PE EH++CM+DLLGRAGKL +A I M P G++
Sbjct: 406 KKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNL 465
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AA L+LEP + V+L+N YA +W + + MRDRG++K+PG SWIE++K
Sbjct: 466 AAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEK 525
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEK 612
+HVF+A D SHP I L + ++ GYVP KE L +HSEK
Sbjct: 526 HVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEK 585
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
+A+AFG + G+PI +MKNLRICGDCH K +S GR I +RD RFH F+DG CS
Sbjct: 586 MAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACS 645
Query: 673 CGDYW 677
CGDYW
Sbjct: 646 CGDYW 650
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 146/288 (50%), Gaps = 6/288 (2%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ-HANVFSFNVLLAAYARQL 79
L A++ + P +AY + + G L+A H + + ++VF + L+ AY +
Sbjct: 170 LVAMWRDGVAP-NAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLG 228
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
+ R++FD++ DLV +N++I+ +A GD A+ LF M++ F + TL+ ++
Sbjct: 229 DLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLR 288
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A + + L A ++ ++N+LL Y + G L++A+ +F+ M + +D +SW
Sbjct: 289 ACTGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQ-RDVISW 347
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
++M+ Q+ + EAL++F M S + + T+ +L A + + G + + K
Sbjct: 348 STMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKK 407
Query: 260 S-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
G + ++DL + +G + + ++ ++ +PD V+W T++
Sbjct: 408 LFGIQPEREHHNCMVDLLGR-AGKLDEAVEFIRDMNLEPDAVIWRTLL 454
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +HA LK L N + +Y KCG L A F++
Sbjct: 282 TLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRM 339
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+V S++ +++ A+ + A A ++FD + P+ ++ ++ A + G E
Sbjct: 340 PQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGW 399
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M++ L G+ ++ C++ L R
Sbjct: 400 YYFRSMKK---------LFGIQPEREHHNCMVDLL-----------------------GR 427
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LDEA +M D V W +++ A H+ G A +E++ L+
Sbjct: 428 AGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLE 477
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/710 (34%), Positives = 362/710 (50%), Gaps = 67/710 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D+ G+ + + ++ I L++KCGCL A F
Sbjct: 70 TLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRS- 128
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + R D++S +I AY G + AL +
Sbjct: 129 --------------------MGAMR---------DIISVTAMIGAYVRHGKNDLALDTYW 159
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA--SVNNSLLTCYSRNG 178
MR + + D FT + ++ A S+ L+ H H+ SV N+L+T Y++ G
Sbjct: 160 KMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCG 219
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L ++K +F M ++KD VSWN+M+ AY + +A LF M +L D+YT +SIL
Sbjct: 220 SLKDSKSLFLTM-DVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSIL 278
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A S + L G H + GF ++ + + LI ++ +C G + + F I + +L
Sbjct: 279 GACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRC-GSLESARRYFYSIEKKEL 337
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
WNTM++ Y+Q ++ D AL +K + G+ PD +F V+ +C++L GK IH
Sbjct: 338 GAWNTMLAAYAQFDKGKD-ALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE 396
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ + I + ALV MY+KCG+L DA++ FD + + VS ++MIA AQHG
Sbjct: 397 CSTSCGFEKDVI-LGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAE 455
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L M I +T SVL AC+H G++ EG YF + FG E + E+
Sbjct: 456 EALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGF 515
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIAL----------------KA-ANHFLQLEPSNA 520
IDLLGRAG L +AE ++ MPF +AL KA + LEP N
Sbjct: 516 IDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENP 575
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L N+YAA+G+W++VA +RR MR +GV+++ G S IE + +++ F D S+P
Sbjct: 576 GSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNL 635
Query: 581 EIHNYLEEMSRKMK-QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI LE + +MK + GYVPD KE+ L HSEK+A+ FGL+++ G
Sbjct: 636 EIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGST 695
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ ++KNLR+C DCH K S I GR I VRD RFH F+ G CSCGDYW
Sbjct: 696 LRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 231/438 (52%), Gaps = 9/438 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ F N+++ Y + ARQ+FD+I Q + S++ L+ Y + AL ++K+M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
K D +TLS ++ A + L + + + A GF+ V SL+ +++ G L+
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+ VF MG ++D +S +M+ AY +H + AL + +M S L D +T A+IL A
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+S + L+ G H H+++S N + + LI +YAKC G ++D +F + D+V W
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKC-GSLKDSKSLFLTMDVKDVVSW 239
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK 361
N MI+ Y+ D A F ++ +G+ PD +F ++ AC+ SP + L ++
Sbjct: 240 NAMIAAYTLYGHDKD-AFSLFHRMCTLGHTPDIYTFSSILGACA--SPKRLEDGRMLHVR 296
Query: 362 IEIR--SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
I R ++ N L++M+++CG+LE ARR F + + + N+M+A YAQ G +A
Sbjct: 297 ITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDA 356
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L L++ ML P TF SV+ +CA G + EG K+ GFE + + +++
Sbjct: 357 LFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVN 415
Query: 480 LLGRAGKLTDAERLIEAM 497
+ + G L DA++ + +
Sbjct: 416 MYAKCGSLADAKKSFDGI 433
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 345/576 (59%), Gaps = 36/576 (6%)
Query: 134 LSGLITASSNNLCLIKQLHCLA--IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
L L+ +S+ N I+ + C A I G +N L+ YS+ G ++ A+++F EM
Sbjct: 23 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEM- 81
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
++ VSWN+MV ++ Q+ + +AL LF +M +T++S++ A + +
Sbjct: 82 PVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK 141
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q H +K+ N +G+ L+D+YAKC G ++D VFE +P+ V W++M++GY Q
Sbjct: 142 QLHGFALKTALDSNVFVGTALLDVYAKC-GLVKDANLVFECMPERSDVTWSSMVAGYVQN 200
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRIS 370
E Y ++AL F + +G + + +SAC+ + + GKQ+ A++ K I SN I
Sbjct: 201 ELY-EEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN-IF 258
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V ++L+ MY+KCG +E+A +F + E N V N++++G+++H +EA+ FE M +
Sbjct: 259 VISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG 318
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P +IT++SVLSAC+H G V +G+KYF +M + P HYSCM+D+LGRAG L +A
Sbjct: 319 ICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 378
Query: 491 ERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ I+ MPF+ + +A AA H ++EP NA +V+L+NIYAA+
Sbjct: 379 KDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAAN 438
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
+WEEVA R L+++ +K+ G SWIE+K ++H F+ + +HP I EI+ LE++ +M
Sbjct: 439 DRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEM 498
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K+ GY K++ L HHSEKLA+ FG++ +G PI +MKNLRICGDCH
Sbjct: 499 KKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCH 558
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +K S+I REI VRDT RFH FK+G CSCG++W
Sbjct: 559 SFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 194/344 (56%), Gaps = 6/344 (1%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A+ + N+L+ Y++ + SAR+LFD++P LVS+NT++ ++ GD E AL LF M
Sbjct: 53 ADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQM 112
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+++ FT+S ++ A + C+ KQLH A+ D V +LL Y++ G +
Sbjct: 113 QKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLV 172
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A VF M E + +V+W+SMV Y Q+ EAL LF ++ L + +T++S L+A
Sbjct: 173 KDANLVFECMPE-RSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 231
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L+ G Q A K+G N + S LID+YAKC G + + VF + + ++VL
Sbjct: 232 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKC-GIIEEAYTVFSSVEEKNVVL 290
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WN ++SG+S + S +A+ F+K+ ++G P+D +++ V+SACS+L G++ L
Sbjct: 291 WNAILSGFS-RHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLM 349
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
I++ S + + +V + + G L +A+ DRMP T S+
Sbjct: 350 IRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASM 393
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 3/206 (1%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A +NVF LL YA+ + A +F+ +P+ V+++++++ Y E A
Sbjct: 147 ALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEA 206
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTC 173
L LF + + + FT+S ++A + LI KQ+ ++ G V +SL+
Sbjct: 207 LVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDM 266
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G ++EA VF + E K+ V WN+++ + +H LEA+ F++M + + + T
Sbjct: 267 YAKCGIIEEAYTVFSSVEE-KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIK 259
S+L+A + L + G ++ +I+
Sbjct: 326 YISVLSACSHLGLVEKGRKYFDLMIR 351
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+ GK + A+ K + + ++ + I +Y+KCG + A+ F+ + NV +N +L+ +
Sbjct: 239 IEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGF 298
Query: 76 ARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDM 122
+R +R A F+++ Q P+ ++Y +++SA + G E F M
Sbjct: 299 SRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLM 349
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/650 (34%), Positives = 359/650 (55%), Gaps = 55/650 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGC----LSAAHHA 56
TF VLK+C D G +H L +K + + +Y+KC L
Sbjct: 160 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLEL 219
Query: 57 FNQTQHANVFSFNV----LLAAYARQLRIASA---------------RQLFDQIPQPDLV 97
F + Q A V + + L + + I +A QLF+ +P +L
Sbjct: 220 FKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQ 279
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK------QL 151
SYN +I YA AL +F+ +++ D +LSG A + +IK Q+
Sbjct: 280 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA----VIKGDLEGLQV 335
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
H L++ V N++L Y + G L EA VF EM +D VSWN+++ A+ Q+
Sbjct: 336 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGN 394
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
+ L LF M+ + D +T S+L A + L G++ H +IKS +S +G
Sbjct: 395 EEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA 454
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
LID+Y+KC G M K+ + + + +V WN +ISG+S +++ S++A F K+ +G
Sbjct: 455 LIDMYSKC-GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQ-SEEAQKTFSKMLEMGVD 512
Query: 332 PDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
PD+ ++ ++ C+NL + LGKQIHA IK E++S+ +++ LV MYSKCGN++D +
Sbjct: 513 PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY-ISSTLVDMYSKCGNMQDFQL 571
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+F++ P + V+ N+M+ GYAQHG+G EAL++FE+M N+ P + TF++VL AC H G
Sbjct: 572 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 631
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------- 503
V +G YF M +G +P+ EHYSC++D++GR+G+++ A LIE MPF +
Sbjct: 632 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 691
Query: 504 ----------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
+A KAA LQLEP ++ YV+L+NIYA +G W EV +R++MR G++K
Sbjct: 692 SXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKK 751
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE 603
+PG SWIE+K ++H F+ D +HP KEI+ L+ ++ +MK GY+PD +
Sbjct: 752 EPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTD 801
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/575 (25%), Positives = 253/575 (44%), Gaps = 52/575 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + + C R+ L GK HA + + +++N I +Y KC L A F+
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-------------------DLVSYNT 101
+ S+N +L YA + I A++LFD +P D ++
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS----------NNLCLIK-- 149
++ + + D + + + FD D T S L+ + L L K
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 150 --------QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
QLH A+ F + + L Y + L + + + S+N+
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++V Y + +G+EAL +F+ + LGLD +L+ A ++ + GLQ H +KS
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
N + + ++D+Y KC + C+ VFEE+ D V WN +I+ + Q ++ L
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACL-VFEEMVSRDAVSWNAIIAAHEQNGN-EEKTLSL 401
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F + + G PD+ ++ V+ AC+ + G +IH IK + + V AL+ MYS
Sbjct: 402 FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSF-VGIALIDMYS 460
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG +E A +L DR+ E VS N++I+G++ EA + F MLE + P N T+ +
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY--SCMIDLLGRAGKLTDAERLIEAMP 498
+L CA+ V G++ + + E + + Y S ++D+ + G + D + + E P
Sbjct: 521 ILDTCANLVTVELGKQIHA---QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
Query: 499 ----FNPGSIALKAANHFLQLEPSNAVPYVMLANI 529
++ A H L E Y+ L N+
Sbjct: 578 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 612
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 326/557 (58%), Gaps = 35/557 (6%)
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
H I G + +N L+ YS+ +D A++ F EM +K VSWN+++ A Q+ E
Sbjct: 66 HAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEM-PVKSLVSWNTVIGALTQNAE 124
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EAL+L +M + +T++S+L ++ +Q HA IK+ N +G+
Sbjct: 125 DREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTA 184
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+ +YAKCS ++D ++FE +P+ + V W++M++GY Q + ++AL F+ +G+
Sbjct: 185 LLHVYAKCSS-IKDASQMFESMPEKNAVTWSSMMAGYVQNG-FHEEALLIFRNAQLMGFD 242
Query: 332 PDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D +SAC+ L+ + GKQ+HA++ K SN I V+++L+ MY+KCG + +A
Sbjct: 243 QDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSN-IYVSSSLIDMYAKCGCIREAYL 301
Query: 391 LFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+F + E ++ L N+MI+G+A+H EA+ LFE M + P ++T+V VL+AC+H G
Sbjct: 302 VFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMG 361
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------ 503
EGQKYF +M P HYSCMID+LGRAG + A LIE MPFN S
Sbjct: 362 LHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSL 421
Query: 504 -----------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
A AA + ++EP+NA +++LANIYAA+ KW+EVA R+L+R+ V+
Sbjct: 422 LASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVR 481
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K+ G SWIE+K ++H F + +HP I +I+ L+ + ++K+ Y D
Sbjct: 482 KERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEEN 541
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
K+ L HHSEKLA+ FGL+ PI ++KNLRICGDCH +K +S REI VRDT
Sbjct: 542 RKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDT 601
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FKDG CSCG++W
Sbjct: 602 NRFHHFKDGFCSCGEFW 618
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 215/402 (53%), Gaps = 14/402 (3%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++ + N+L+ Y++ + SAR+ F+++P LVS+NT+I A + AL L M+
Sbjct: 77 DILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQ 136
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + FT+S ++ + +++ QLH +I D V +LL Y++ +
Sbjct: 137 REGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIK 196
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A ++F M E K+ V+W+SM+ Y Q+ EAL +F+ + D + ++S ++A
Sbjct: 197 DASQMFESMPE-KNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSAC 255
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVL 300
L L+ G Q HA KSGF N ++ S LID+YAKC G +R+ VF+ + + +VL
Sbjct: 256 AGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKC-GCIREAYLVFQGVLEVRSIVL 314
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WN MISG++ + + +A+ F+K+ + G+ PDD ++VCV++ACS++ G++ L
Sbjct: 315 WNAMISGFA-RHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLM 373
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHG---- 414
++ S + + ++ + + G + A L +RMP + T S+ S++A +G
Sbjct: 374 VRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEF 433
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ A LFE +E N +I ++ +A +VA +K
Sbjct: 434 AEIAAKYLFE--MEPNNAGNHILLANIYAANKKWDEVARARK 473
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 5/200 (2%)
Query: 46 KCGCLSAAH-HAFN--QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
KC L HAF+ +N F LL YA+ I A Q+F+ +P+ + V+++++
Sbjct: 157 KCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSM 216
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGF 160
++ Y G E AL +F++ + FD D F +S ++A + LI KQ+H ++ GF
Sbjct: 217 MAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGF 276
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
V++SL+ Y++ G + EA VF + E++ V WN+M+ + +H EA+ LF+
Sbjct: 277 GSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFE 336
Query: 221 EMVSLQLGLDMYTLASILTA 240
+M D T +L A
Sbjct: 337 KMQQRGFFPDDVTYVCVLNA 356
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA-N 64
+ C G L+ GK +HA+ K+ + Y+S+ I +Y+KCGC+ A+ F +
Sbjct: 252 VSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
+ +N +++ +AR R A LF+++ Q PD V+Y +++A + G E F
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371
Query: 121 DM 122
M
Sbjct: 372 LM 373
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/657 (35%), Positives = 358/657 (54%), Gaps = 65/657 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ I +P+ + +NT+I +A D S+L+L+ M + +T L+ A
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + GFD V+ SL++ Y +N L++A +VF
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ +KD VSWN+M+ Y + EAL+LF+EM+ + + D
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T ++L+A + G Q H+ + GF N I + LIDLY+KC G++ +F+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKC-GEVETACGLFQ 255
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ Y +AL F+++ R G P+D + + V+ AC++L
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G+ IH + +++ +N S+ +L+ MY+KCG++E A ++F+ M + S N+MI G
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+A HG + LF M + I P +ITFV +LSAC+H+G + G+ F M + P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANHF 512
+ EHY CMIDLLG +G +AE +I M P + LKA A +
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+++EP N Y++L+NIYA++G+WE+VA IR L+ + ++K PG S IEV + FV
Sbjct: 495 IKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFGL+
Sbjct: 555 DKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 614
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + ++KNLR+C +CH A K +S I REI RD RFH F+DG CSC DYW
Sbjct: 615 STKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 355/650 (54%), Gaps = 44/650 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V+ N L+A Y R ++ A +F + D+V++N++++ + G AL F D++
Sbjct: 194 DVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQ 253
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
D ++ +I AS L+ K++H AI GFD V N+L+ Y++ +
Sbjct: 254 NADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMS 313
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
R F M KD +SW + Y Q++ L+AL+L +++ + +D + SIL A
Sbjct: 314 YGGRAFDLMAH-KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLAC 372
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L L + H + I+ G + + + +ID+Y +C G + +++FE I D+V W
Sbjct: 373 RGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGEC-GIIDYAVRIFESIECKDVVSW 430
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
+MIS Y +++AL F + G PD + V ++SA +LS GK+IH I
Sbjct: 431 TSMISCYVHNG-LANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFII 489
Query: 361 KIEIRSNRI---SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
R I S++N LV MY++CG++EDA ++F N + +MI+ Y HG G
Sbjct: 490 ----RKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGE 545
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ LF M + I P +ITF+++L AC+H+G V EG+ + +MK + EP EHY+C+
Sbjct: 546 AAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCL 605
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGR L +A +++++M P I AA L+L+ N
Sbjct: 606 VDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNP 665
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+++N++AA+G+W++V +R M+ G+ K PG SWIEV ++H F++ D HP
Sbjct: 666 GNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECD 725
Query: 581 EIHNYLEEMSRKMK-QAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEP 627
+I+ L +++ K+K + GYV +K + L HSE+LA+A+GLL+T+ G P
Sbjct: 726 KIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTP 785
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLR+CGDCH+ +S RE+ VRD RFH FKDG CSCGD+W
Sbjct: 786 IRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 248/503 (49%), Gaps = 53/503 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C DL G +H L +K ++ N + LY+KC ++ A F++
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Y R D+VS+N++ISAY+ G AL LF
Sbjct: 120 --------------YVRN----------------DVVSWNSIISAYSGNGMCTEALCLFS 149
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + T+ +T + + A S+ + L Q+H + G V N+L+ Y R G
Sbjct: 150 EMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFG 209
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EA +F + E KD V+WNSM+ + Q+ EAL+ F ++ + L D ++ SI+
Sbjct: 210 KMPEAAVIFGNL-EGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISII 268
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM----KVFEEIP 294
A L L+ G + HA+ IK+GF N +G+ LID+YAKC CM + F+ +
Sbjct: 269 VASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCC-----CMSYGGRAFDLMA 323
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG-- 352
DL+ W T +GY+Q + Y QAL ++L G D ++ AC L+ LG
Sbjct: 324 HKDLISWTTAAAGYAQNKCYL-QALELLRQLQMEGMDVDATMIGSILLACRGLN-CLGKI 381
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K+IH TI+ + + N ++ +Y +CG ++ A R+F+ + + VS SMI+ Y
Sbjct: 382 KEIHGYTIRGGLSDPVL--QNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVH 439
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPE 470
+G+ +AL +F M ET + P +T VS+LSA + +G++ F + K GF E
Sbjct: 440 NGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRK---GFILE 496
Query: 471 GEHYSCMIDLLGRAGKLTDAERL 493
G + ++D+ R G + DA ++
Sbjct: 497 GSISNTLVDMYARCGSVEDAYKI 519
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 237/505 (46%), Gaps = 35/505 (6%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y + + A +FD++ + + ++N ++ Y G+ AL ++++MR D +T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 135 SGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
L+ A +L ++H LAI G D + V NSL+ Y++ ++ A+++F M
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
D VSWNS++ AY + EAL LF EM+ + + YT A+ L A + G+Q
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HA ++KSG + ++ + L+ +Y + G M + +F + D+V WN+M++G+ Q
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVR-FGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISV 371
YS +AL F L PD S + +I A L L GK+IHA IK SN I V
Sbjct: 241 LYS-EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN-ILV 298
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N L+ MY+KC + R FD M + +S + AGYAQ+ ++AL L + +
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE-----HYSCMIDLLGRAGK 486
S+L AC G +K++ G+ G + +ID+ G G
Sbjct: 359 DVDATMIGSILLAC-------RGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGI 411
Query: 487 LTDAERLIEAMP-------------FNPGSIALKAANHFLQLEPSNAVP-YVMLANIYAA 532
+ A R+ E++ + +A KA F ++ + P YV L +I +A
Sbjct: 412 IDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSA 471
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGF 557
++T+++ G + GF
Sbjct: 472 VCS---LSTLKKGKEIHGFIIRKGF 493
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY KCG++ DA +FD+M E + + N+M+ GY +G + AL ++ M + + T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 438 FVSVLSACA 446
F +L AC
Sbjct: 61 FPVLLKACG 69
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L L GK +H ++ +SN + +Y++CG + A+ F T
Sbjct: 464 TLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCT 523
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
++ N+ + +++AY +A +LF D+ PD +++ L+ A + G
Sbjct: 524 KNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGK 583
Query: 117 SLFKDMR 123
S + M+
Sbjct: 584 SFLEIMK 590
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/634 (35%), Positives = 356/634 (56%), Gaps = 42/634 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAH------ 54
++ ++ CV DL G L K V S + F ++ C LSA
Sbjct: 242 SWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS---QSTFASVFRSCAGLSALRLGSQLH 298
Query: 55 -HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
HA +V L Y + ++ A++LF+ +P +L SYN +I YA
Sbjct: 299 GHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGI 358
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK------QLHCLAIYCGFDHYASVN 167
AL +F+ +++ D +LSG A + +IK Q+H L++ V
Sbjct: 359 EALGMFRLLQKSGLGLDEVSLSGAFRACA----VIKGDLEGLQVHGLSMKSLCQSNICVA 414
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N++L Y + G L EA VF EM +D VSWN+++ A+ Q+ + L LF M+ +
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 473
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D +T S+L A + L G++ H +IKS +S +G LID+Y+KC G M
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKC-GMMEKAE 532
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
K+ + + + +V WN +ISG+S +++ S++A F K+ +G PD+ ++ ++ C+NL
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQ-SEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 591
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LGKQIHA IK E++S+ +++ LV MYSKCGN++D + +F++ P + V+ N+M
Sbjct: 592 VTVELGKQIHAQIIKKELQSDAY-ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAM 650
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ GYAQHG+G EAL++FE+M N+ P + TF++VL AC H G V +G YF M +G
Sbjct: 651 VCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYG 710
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
+P+ EHYSC++D++GR+G+++ A LIE MPF + +A KAA
Sbjct: 711 LDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAA 770
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
LQLEP ++ YV+L+NIYA +G W EV +R++MR G++K+PG SWIE+K ++H F
Sbjct: 771 YSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAF 830
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE 603
+ D +HP KEI+ L+ ++ +MK GY+PD +
Sbjct: 831 LVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTD 864
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 259/497 (52%), Gaps = 10/497 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + + C R+ L GK HA + + +++N I +Y KC L A F+
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+N +L YA + I A++LFD +P+ D+VS+N+LIS Y GD + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 121 DMRE--KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M FD F + +S + Q+H LA+ GFD ++LL Y++
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD + + F+ M E K+ VSW++++ Q+ + L+LF+EM +G+ T AS+
Sbjct: 224 KLDCSIQFFHSMPE-KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ L L G Q H H +K+ F + IG+ +D+Y KC+ ++ D K+F +P +L
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCN-NLSDAQKLFNSLPNHNL 341
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+N +I GY++ ++ +ALG F+ L + G D+ S AC+ + L G Q+H
Sbjct: 342 QSYNAIIVGYARSDK-GIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 400
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L++K +SN I V NA++ MY KCG L +A +F+ M + VS N++IA + Q+G
Sbjct: 401 LSMKSLCQSN-ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEE 459
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSC 476
+ L LF WML++ + P T+ SVL ACA + G + + ++K G +
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG--IA 517
Query: 477 MIDLLGRAGKLTDAERL 493
+ID+ + G + AE+L
Sbjct: 518 LIDMYSKCGMMEKAEKL 534
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/715 (32%), Positives = 380/715 (53%), Gaps = 70/715 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C TG+++H L +K+ + +SN + +Y+KCG ++ A AF +
Sbjct: 167 TLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEA 226
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ R ++VS+N ++ YA G+ +A L +
Sbjct: 227 PPG-------------------AGR---------NVVSWNVMLGGYARNGEAGAAFGLLR 258
Query: 121 DMR--EKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCYS 175
+M+ E+ D T+ ++ S L +++LH + G V N+L+ Y
Sbjct: 259 EMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYG 318
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTL 234
R G L A RVF + K SWN+++ A+ Q+ E A++LF+EM + D +++
Sbjct: 319 RCGCLLHACRVFDGICS-KMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSI 377
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A +L+ L+ G H ++++G ++S I L+ +Y +C G +F+ +
Sbjct: 378 GSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQC-GRESLARVLFDAVE 436
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN--RVGYHPDDCSFVCVISACSNLSP-SL 351
+ D V WNTMI+GYSQ ++L F+++ + G+ P + + ACS L L
Sbjct: 437 EKDEVSWNTMIAGYSQNG-LPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRL 495
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GK++H +K ++ + ++++++ MYSKCG+++DAR FDR+ + VS MI GYA
Sbjct: 496 GKEMHCFALKADLCEDSF-LSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYA 554
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G G EA+ L++ M + P T++ +L AC H G + +G +F M+++ E +
Sbjct: 555 VNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKL 614
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQ 514
EHY+C+I +L RAG+ DA L+E MP P G + L K A+ L+
Sbjct: 615 EHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLE 674
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP A YV+ +N+YA S +W+E+ +R+++RD GV K+PG SWI++ +++ FVA +
Sbjct: 675 LEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGEN 734
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSEKLAVAFGLLST 622
S P + ++ + K++ AGY PD + L HSEK A+AFGLL T
Sbjct: 735 SLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRT 794
Query: 623 SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + V KN+R+C DCHNA K IS +A REI VRD RFH F+DG CSCGDYW
Sbjct: 795 AGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 252/529 (47%), Gaps = 45/529 (8%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ F N L++ Y R R+ A ++F+ + +LVS+N L++A A D L LF+D
Sbjct: 97 GDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRRGLELFRDC 153
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI-----KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
E T + L+T L + +H LA+ G+D V+N L+ Y++
Sbjct: 154 LEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKC 213
Query: 178 GFLDEAKRVFYEM--GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYT 233
G + +A+ F E G ++ VSWN M+ Y ++ E A L +EM + G+ D T
Sbjct: 214 GEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEIT 273
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFH-QNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+ S+L + L +L + HA +++ G H + + LI Y +C + C +VF+
Sbjct: 274 MLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHAC-RVFDG 332
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSPSL 351
I + WN +I ++Q E S A+ F+++ N G PD S ++ AC NL L
Sbjct: 333 ICSKMVSSWNALIGAHAQNGEAS-AAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLL 391
Query: 352 -GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
GK H ++ + + + +L+++Y +CG AR LFD + E + VS N+MIAGY
Sbjct: 392 HGKAAHGFILRNGLEKDSF-IRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGY 450
Query: 411 AQHGIGMEALRLFEWMLETNIP--PTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFG 466
+Q+G+ E+L+LF M P+ + S L AC+ V G++ F++ D+
Sbjct: 451 SQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLC- 509
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
+ S +ID+ + G + DA F +L+ +AV + ++
Sbjct: 510 --EDSFLSSSIIDMYSKCGSVDDARVF------------------FDRLKAKDAVSWTVM 549
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM-HVFVAEDG 574
YA +G+ +E + M G++ GF+++ + H + EDG
Sbjct: 550 ITGYAVNGRGKEAVGLYDKMGREGMEPD-GFTYLGLLMACGHAGMLEDG 597
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 177/375 (47%), Gaps = 22/375 (5%)
Query: 96 LVSYNTLISAYADCGDTESALSLFKDM--REKRFDTDGFTLSGLITASSNNLCLIKQLHC 153
L +N L++ + G AL++ + D FTL + + + +Q+H
Sbjct: 30 LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDDG--RQVHA 87
Query: 154 LAIYCGF-DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
+A G D V NSL++ Y R G +D+A++VF M ++ VSWN+++ A R G
Sbjct: 88 VAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAG-RNLVSWNALMAAVADPRRG 146
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
LE + E + D TL ++L +L G H +KSG+ + + L
Sbjct: 147 LELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVL 206
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQP---DLVLWNTMISGYSQKEEYSDQALGCFK--KLNR 327
+D+YAKC G+M D F E P ++V WN M+ GY++ E + A G + ++
Sbjct: 207 VDMYAKC-GEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGE-AGAAFGLLREMQMEE 264
Query: 328 VGYHPDDCSFVCVISACSNLSPSLGK--QIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G D+ + + V+ CS L P L K ++HA ++ + V NAL+A Y +CG L
Sbjct: 265 RGVPADEITMLSVLPVCSGL-PELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCL 323
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET-NIPPTNITFVSVLSA 444
A R+FD + S N++I +AQ+G A+ LF M P + S+L A
Sbjct: 324 LHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLA 383
Query: 445 CAHT-----GKVAEG 454
C + GK A G
Sbjct: 384 CGNLKHLLHGKAAHG 398
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 45/306 (14%)
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRV--GYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
WN +++ S+ ++D AL +L G PD + + +C G+Q+HA+
Sbjct: 33 WNGLLADLSRAGRHAD-ALAILPRLLAASDGVAPDRFTLPPALKSCRGDD---GRQVHAV 88
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
K+ + V N+LV+MY +CG ++DA ++F+ M N VS N+++A A G+E
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFEPEGEH 473
R L P T V+VL CA TG+ G S G++
Sbjct: 149 LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKS------GWDAAPRV 202
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ ++D+ + G++ DAE P G N V + ++ YA +
Sbjct: 203 SNVLVDMYAKCGEMADAECAFLEAPPGAG---------------RNVVSWNVMLGGYARN 247
Query: 534 GKWEEVATIRRLMR--DRGVQKK-----------PGFSWIEVKKQMHVFVAEDGSHPMIK 580
G+ + R M+ +RGV G + +++H FV G H
Sbjct: 248 GEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGD 307
Query: 581 EIHNYL 586
+ N L
Sbjct: 308 MVPNAL 313
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/530 (40%), Positives = 308/530 (58%), Gaps = 38/530 (7%)
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASI 237
+D +++F M E KD VSWN+++ G R GL E L + +EM L D +TL+S+
Sbjct: 250 VDSVRKIFEMMPE-KDLVSWNTIIA--GNARNGLYGETLTMVREMGGANLKPDSFTLSSV 306
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L D+ G + H I+ G ++ S LID+YAKC+ + D +VF + + D
Sbjct: 307 LPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCT-RVVDSYRVFTLLTERD 365
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+ WN++I+G Q + D+ L F+++ P SF ++ AC++L+ LGKQ+H
Sbjct: 366 GISWNSIIAGCVQNGLF-DEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLH 424
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ N I + ++LV MY+KCGN+ AR++FDRM + VS +MI G A HG
Sbjct: 425 GYITRNGFDEN-IFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHA 483
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
++A+ LFE M I P + F++VL+AC+H G V E KYF+ M FG P EHY+
Sbjct: 484 LDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAA 543
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHFLQLEPSN 519
+ DLLGRAG+L +A I MP P GS+ A K AN L+++P N
Sbjct: 544 VSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKN 603
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
Y++LANIY+A+ +W+E A R +R G++K P SWIEV+ +++ F+A D SHP
Sbjct: 604 TGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCY 663
Query: 580 KEIHNYLEEMSRKMKQAGYVPD-----------KEKRLV-HHSEKLAVAFGLLSTSYGEP 627
++I +E + M++ GYVPD ++K LV HSE+LA+ FG+++T G
Sbjct: 664 EKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTT 723
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLR+C DCH A KFIS I GREI VRD RFH FK+G CSCGDYW
Sbjct: 724 IRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 191/428 (44%), Gaps = 44/428 (10%)
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN-- 143
+LF+ + P +++ ++I Y G +L F M D ++ A +
Sbjct: 63 RLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLM 122
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV-----S 198
+L L + LH I G D N+L+ YS+ FL ++ R ++ DE+ S
Sbjct: 123 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRS 182
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+ V G + ++ F VS + +F A ++
Sbjct: 183 VRTASVLVGNQGRKVSDIEAFNYDVSCR-----------------------SREFEAQVL 219
Query: 259 KSGFHQNS--------HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
+ + S ++G + D+ S D K+FE +P+ DLV WNT+I+G ++
Sbjct: 220 EIDYKPRSEYREMEACNLGQQIKDISHSMSVD--SVRKIFEMMPEKDLVSWNTIIAGNAR 277
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRI 369
Y + L +++ PD + V+ + N+ S GK+IH +I+ + + +
Sbjct: 278 NGLYG-ETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAE-V 335
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V ++L+ MY+KC + D+ R+F + E + +S NS+IAG Q+G+ E L+ F ML
Sbjct: 336 YVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMA 395
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
I P + +F S++ ACAH + G++ + GF+ S ++D+ + G +
Sbjct: 396 KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRT 454
Query: 490 AERLIEAM 497
A ++ + M
Sbjct: 455 ARQIFDRM 462
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
+ Q A V+ + L+ YA+ R+ + ++F + + D +S+N++I+ G +
Sbjct: 326 SIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEG 385
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
L F+ M + ++ S ++ A ++ L L KQLH GFD + +SL+
Sbjct: 386 LKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 445
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ G + A+++F M ++D VSW +M++ H L+A++LF++M + + +
Sbjct: 446 YAKCGNIRTARQIFDRM-RLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVA 504
Query: 234 LASILTA 240
++LTA
Sbjct: 505 FMAVLTA 511
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 148/336 (44%), Gaps = 46/336 (13%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YS L ++ R+F + ++W S++ Y H ++L F M++ L D
Sbjct: 52 YSHINLLHDSLRLFNTL-HFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-----SGDMR-DCM 287
S+L A L DL G H ++I+ G + + G+ L+++Y+K SG R
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSD-----QALGCFKK-----LNRVGYHPDDCSF 337
+V +E+ + + + +Q + SD + C + + + Y P S
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPR--SE 228
Query: 338 VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
+ AC+ LG+QI + S+ +SV++ R++F+ MPE
Sbjct: 229 YREMEACN-----LGQQIKDI-------SHSMSVDSV--------------RKIFEMMPE 262
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS N++IAG A++G+ E L + M N+ P + T SVL A +++G++
Sbjct: 263 KDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEI 322
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
G + E S +ID+ + ++ D+ R+
Sbjct: 323 HGCSIRQ-GLDAEVYVASSLIDMYAKCTRVVDSYRV 357
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 52/195 (26%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F ++ C L GK LH +N + ++++ + +Y+KCG
Sbjct: 403 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCG------------ 450
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I +ARQ+FD++ D+VS+ +I A G A+ LF+
Sbjct: 451 -------------------NIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFE 491
Query: 121 DMREKRFDTDGFTLSGLITASS------------NNLCLIKQLHCLAIYCGFDHYASVNN 168
M+ + + + ++TA S N++ L I G +HYA+V++
Sbjct: 492 QMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLD-----FGIAPGVEHYAAVSD 546
Query: 169 SLLTCYSRNGFLDEA 183
L R G L+EA
Sbjct: 547 LL----GRAGRLEEA 557
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
S S +Q+HA +K + ++ + + L+++YS L D+ RLF+ + ++ S+I
Sbjct: 23 SRSQAQQLHAQVLKFQ--ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVI 80
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
Y HG+ ++L F ML + + P + F SVL ACA
Sbjct: 81 RCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/610 (38%), Positives = 337/610 (55%), Gaps = 53/610 (8%)
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
++A GD A F + K T L+G AS LI+ ++ H
Sbjct: 19 VAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASG----LIRLADARRLFDSIPH 74
Query: 163 YASVN-NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
+V+ N+LL+C+ G +D A+RVF M +KD SWN+MV ++ EA +F+
Sbjct: 75 PDTVSYNTLLSCHFACGDIDGARRVFSTM-PVKDVTSWNTMVSGLSKNGASEEAAAMFRI 133
Query: 222 MVSLQLGLDMYTLASILTA---FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
M ++ + + + L + EDL F K+ + + SG +D
Sbjct: 134 M-PVRNAVSWNAMVAALACSGDMGAAEDL-----FRNAPEKTDAILWTAMVSGYMD---- 183
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSF 337
+G+++ M+ F +P +LV WN +++GY K +D AL FK + P+ +
Sbjct: 184 -TGNVQKAMEFFGAMPVRNLVSWNAVVAGYV-KNSRADDALRVFKTMVEDSIVQPNASTL 241
Query: 338 VCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
V+ CSNLS G+Q+H +K+ + N ++V +L++MY KCG+L DA ++FD M
Sbjct: 242 SSVLLGCSNLSALGFGRQVHQWCMKLPLSRN-VTVGTSLLSMYCKCGDLNDACKVFDEMS 300
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ V+ N+MI+GYAQHG GM+A++LFE M + + P IT ++VL+AC HTG G +
Sbjct: 301 TKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQ 360
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI------- 504
F M++ + EP+ +HYSCM+DLL RAG L A +I +MPF P G++
Sbjct: 361 CFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVY 420
Query: 505 -----ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
A AA ++ +P NA YV LANIYA + KW +V+ +RR M+D V K PG+SW
Sbjct: 421 KNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSW 480
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLV 607
+E+K H F + D HP + IH+ L+ + MK GYVPD K + L+
Sbjct: 481 MEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLM 540
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+AFGL+STS G + + KNLRICGDCHNA K IS I REI +RDT RFH F+
Sbjct: 541 RHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFR 600
Query: 668 DGRCSCGDYW 677
G CSCGDYW
Sbjct: 601 GGHCSCGDYW 610
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 174/347 (50%), Gaps = 33/347 (9%)
Query: 28 NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ---LRIASA 84
+L+ + LS + + G L+ A AF TQ ++N LLA YA+ +R+A A
Sbjct: 6 SLLAVARPLSTVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADA 65
Query: 85 RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASS 142
R+LFD IP PD VSYNTL+S + CGD + A +F M K + +SGL AS
Sbjct: 66 RRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASE 125
Query: 143 NNLCLIKQL----------HCLAIYCGFDHYASVN--------------NSLLTCYSRNG 178
+ + + A+ C D A+ + ++++ Y G
Sbjct: 126 EAAAMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTG 185
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASI 237
+ +A F M +++ VSWN++V Y ++ +AL++F+ MV + + TL+S+
Sbjct: 186 NVQKAMEFFGAM-PVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSV 244
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L ++L L G Q H +K +N +G+ L+ +Y KC GD+ D KVF+E+ D
Sbjct: 245 LLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKC-GDLNDACKVFDEMSTKD 303
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+V WN MISGY+Q QA+ F+K+ G PD + + V++AC
Sbjct: 304 IVAWNAMISGYAQHGG-GMQAIKLFEKMKDEGVVPDWITLLAVLTAC 349
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 13 RDLVTGKSLHALYLKN------------LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
R+LV+ ++ A Y+KN +V S N L GC + + F +
Sbjct: 200 RNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQ 259
Query: 61 QHA---------NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H NV LL+ Y + + A ++FD++ D+V++N +IS YA G
Sbjct: 260 VHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGG 319
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNN-------LCLIKQLHCLAIYCGFDHYA 164
A+ LF+ M+++ D TL ++TA + C I DHY+
Sbjct: 320 GMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYS 379
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEM 190
+ + L C R G L+ A + + M
Sbjct: 380 CMVD--LLC--RAGLLERAVNMIHSM 401
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G+ +H +K + + + + +Y KCG L+ A F++
Sbjct: 240 TLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEM 299
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ ++N +++ YA+ A +LF+++ PD ++ +++A G + +
Sbjct: 300 STKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGI 359
Query: 117 SLFKDMRE 124
F+ M+E
Sbjct: 360 QCFETMQE 367
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/658 (34%), Positives = 353/658 (53%), Gaps = 67/658 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +F+ I +P+L+ +NT+ +A D SA+ L+ M + +T L+ + +
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 144 NLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------- 187
L + K Q+H + G++ V+ SL++ Y +NG +A +VF
Sbjct: 116 -LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTA 174
Query: 188 -----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
++ +KD VSWN+++ Y EAL LF+EM+ + D
Sbjct: 175 LITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPD 234
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T+ ++++A + G Q H+ + G N I + LIDLY+KC G++ +F
Sbjct: 235 ESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKC-GEVETACGLF 293
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ + D++ WNTMI GY+ Y +AL F+++ R G +P+D + + ++ AC+ L
Sbjct: 294 QGLSNKDVISWNTMIGGYTHLNLYK-EALLLFQEMLRSGENPNDVTMLSILPACAQLGAI 352
Query: 350 SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
G+ IH + +I+ +N S+ +L+ MY+KCG++E A ++F+ M + N+MI
Sbjct: 353 DFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIF 412
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G+A HG A +F M + I P +ITFV +LSAC+H+G + G++ F M +
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKIT 472
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------ANH 511
P+ EHY CMIDLLG G +AE +I M P + LKA A
Sbjct: 473 PKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQK 532
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
+++EP N YV+L+NIYA +G+W EVA IR L+ D+G++K PG S IE+ +H F+
Sbjct: 533 LIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
D HP +EI+ LEEM +++AG+VPD K+ L HHSEKLA+AFGL
Sbjct: 593 GDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGL 652
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 653 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 37/279 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S L++ + + + + VFE I +P+L++WNTM G++
Sbjct: 21 IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRI 369
+ A+ + + +G P+ +F ++ +C+ L S G+QIH +K+ + +
Sbjct: 81 SSD-PVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELD-L 138
Query: 370 SVNNALVAMYSKCGN-------------------------------LEDARRLFDRMPEH 398
V+ +L++MY K G +E A+++FD +P
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N++I+GYA G EAL LF+ M++TN+ P T V+V+SACA +G + G++
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S + D G + + +IDL + G++ A L + +
Sbjct: 259 SWIDD-HGLGSNLKIVNALIDLYSKCGEVETACGLFQGL 296
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/676 (34%), Positives = 355/676 (52%), Gaps = 71/676 (10%)
Query: 66 FSFNVLLAAYARQLRIASARQLF--DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F FN LL+ YAR + A++LF DLV++NT+IS G E A+ + DM
Sbjct: 193 FPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMV 252
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSRNG 178
DG T + + A S L + +++H + D A+ V ++L+ Y+ N
Sbjct: 253 ALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK--DDDLAANSFVASALVDMYASNE 310
Query: 179 FLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGL--EALQLFQEM-VSLQLGLDMYTL 234
+ A+RVF + E ++ WN+M+ Y QH G+ EA++LF M T+
Sbjct: 311 QVSHARRVFDMVPEHGRQLGMWNAMICGYAQH-GGMDEEAIELFSRMEAEAGCAPSETTM 369
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
A +L A E G H +++K N + + L+D+YA+ G M + +F I
Sbjct: 370 AGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARL-GRMDEAHTIFAMID 428
Query: 295 QPDLVLWNTMISG-------------------YSQKEEYSDQALGCFKKLNRVGYHPDDC 335
D+V WNT+I+G S G ++ P++
Sbjct: 429 LRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNI 488
Query: 336 SFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ + ++ C+ L+ P+ GK+IH ++ + S+ ++V +ALV MY+KCG L AR +FDR
Sbjct: 489 TLMTLLPGCAVLAAPARGKEIHGYAVRHALESD-LAVGSALVDMYAKCGCLALARAVFDR 547
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAE 453
+P N ++ N +I Y HG+G EAL LF+ M+ P +TF++ L+AC+H+G V
Sbjct: 548 LPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDR 607
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---------- 503
G + F MK +GFEP ++C++D+LGRAG+L +A +I +M PG
Sbjct: 608 GLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMA--PGEHQVSAWSTML 665
Query: 504 ----------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
+ AA +LEP A YV+L NIY+A+G WE +R +MR RGV K
Sbjct: 666 GACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAK 725
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
+PG SWIE+ +H F+A + +HP ++H +++ + +M++ GYVPD
Sbjct: 726 EPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAE 785
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
K L +HSEKLA+AFGLL G I V KNLR+C DCH A KFIS + GREI +RD
Sbjct: 786 KAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVR 845
Query: 662 RFHCFKDGRCSCGDYW 677
RFH F+DG CSCGDYW
Sbjct: 846 RFHHFRDGTCSCGDYW 861
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 228/466 (48%), Gaps = 41/466 (8%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDL---VSYNTLISAYADCGDTESALSLFKDMREK 125
N LL AYAR + +A LF P PDL VSYN+LISA AL +DM
Sbjct: 89 NALLTAYARCGDLDAALALFAATP-PDLRDAVSYNSLISALCLFRRWGHALDALRDMLAD 147
Query: 126 RFDTDGFTLSGLITASSN----NLCLIKQLHCLAIYCGFDHYASVN---NSLLTCYSRNG 178
+ FTL ++ A S+ L ++ H A+ GF N+LL+ Y+R G
Sbjct: 148 H-EVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLG 206
Query: 179 FLDEAKRVFYEMGE-IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+D+A+R+F+ G + D V+WN+M+ Q EA+Q+ +MV+L + D T AS
Sbjct: 207 LVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASA 266
Query: 238 LTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ- 295
L A + LE L G + HA ++K NS + S L+D+YA + + +VF+ +P+
Sbjct: 267 LPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYAS-NEQVSHARRVFDMVPEH 325
Query: 296 -PDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLGK 353
L +WN MI GY+Q ++A+ F ++ G P + + V+ AC+ GK
Sbjct: 326 GRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGK 385
Query: 354 Q-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H +K ++ SNR V NAL+ MY++ G +++A +F + + VS N++I G
Sbjct: 386 EAVHGYVVKRDMASNRF-VQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIV 444
Query: 413 HGIGMEALRLF------------EWMLE---TNIP-----PTNITFVSVLSACAHTGKVA 452
G+ EA +L E MLE T++ P NIT +++L CA A
Sbjct: 445 QGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPA 504
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G++ E + S ++D+ + G L A + + +P
Sbjct: 505 RGKEIHGYAV-RHALESDLAVGSALVDMYAKCGCLALARAVFDRLP 549
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 173/344 (50%), Gaps = 27/344 (7%)
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEM-GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+V+N+LLT Y+R G LD A +F +++D VS+NS++ A R AL ++M+
Sbjct: 86 AVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML 145
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVG--GLQFHAHLIKSGF---HQNSHIGSGLIDLYAK 278
+ + +TL S+L A + L D G + HA +K GF + + L+ +YA+
Sbjct: 146 A-DHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYAR 204
Query: 279 CSGDMRDCMKVF--EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
G + D ++F DLV WNTMIS Q ++A+ + +G PD +
Sbjct: 205 L-GLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGR-CEEAVQVLYDMVALGVRPDGVT 262
Query: 337 FVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
F + ACS L +G+++HA +K + + V +ALV MY+ + ARR+FD +
Sbjct: 263 FASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMV 322
Query: 396 PEHNTV--SLNSMIAGYAQHGIGM--EALRLFEWM-LETNIPPTNITFVSVLSACAH--- 447
PEH N+MI GYAQHG GM EA+ LF M E P+ T VL ACA
Sbjct: 323 PEHGRQLGMWNAMICGYAQHG-GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEV 381
Query: 448 -TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
TGK E + + +DM + ++D+ R G++ +A
Sbjct: 382 FTGK--EAVHGYVVKRDMASNRFV---QNALMDMYARLGRMDEA 420
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 153/324 (47%), Gaps = 37/324 (11%)
Query: 55 HAF---NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ--PDLVSYNTLISAYADC 109
HAF + AN F + L+ YA +++ AR++FD +P+ L +N +I YA
Sbjct: 283 HAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQH 342
Query: 110 GDT-ESALSLFKDMR-EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYAS 165
G E A+ LF M E T++G++ A + + + +H +
Sbjct: 343 GGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRF 402
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEM- 222
V N+L+ Y+R G +DEA +F M +++D VSWN+++ G +GL EA QL +EM
Sbjct: 403 VQNALMDMYARLGRMDEAHTIF-AMIDLRDIVSWNTLIT--GCIVQGLISEAFQLVREMQ 459
Query: 223 --VSLQLGLDMY-----------------TLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
S G M TL ++L L G + H + ++
Sbjct: 460 LPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALE 519
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+ +GS L+D+YAKC G + VF+ +P+ +++ WN +I Y D+AL F
Sbjct: 520 SDLAVGSALVDMYAKC-GCLALARAVFDRLPRRNVITWNVLIMAYGM-HGLGDEALALFD 577
Query: 324 KLNRVG-YHPDDCSFVCVISACSN 346
++ G P++ +F+ ++ACS+
Sbjct: 578 RMVANGEATPNEVTFIAALAACSH 601
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 38/216 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+ A F++
Sbjct: 489 TLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRL 548
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
NV ++NVL+ AY A LFD++ P+ V++ ++A + G +
Sbjct: 549 PRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRG 608
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF+ M+ GF+ ++ ++
Sbjct: 609 LELFQGMKRDY--------------------------------GFEPTPYLHACVVDVLG 636
Query: 176 RNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHR 210
R G LDEA + M + +VS W++M+ A HR
Sbjct: 637 RAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHR 672
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIAG---YAQHGIGMEALRLFE 424
+V+NAL+ Y++CG+L+ A LF P + VS NS+I+ + + G ++ALR +
Sbjct: 86 AVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALR--D 143
Query: 425 WMLETNIPPTNITFVSVLSACAHTG----KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+ + + ++ T VSVL AC+H ++ F++ E ++ ++ +
Sbjct: 144 MLADHEV--SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSM 201
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
R G + DA+RL F+ G+ + V + + ++ G+ EE
Sbjct: 202 YARLGLVDDAQRLF----FSSGAGV------------GDLVTWNTMISLLVQGGRCEEAV 245
Query: 541 TIRRLMRDRGVQKK--------PGFSWIE---VKKQMHVFVAED 573
+ M GV+ P S +E V +++H FV +D
Sbjct: 246 QVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKD 289
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/621 (38%), Positives = 336/621 (54%), Gaps = 58/621 (9%)
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLH 152
Q + N +I+ GD + AL +F MR K + T + L+ S + + + H
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAH 113
Query: 153 CLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
L FD + N +L+CY RN ++A+ F M KD SWN+M+ Y +
Sbjct: 114 QL-----FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM-PFKDAASWNTMITGYAR 167
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
E +A +LF M+ + + ++++ + G L+ +H K +
Sbjct: 168 RGEMEKARELFYSMMEK----NEVSWNAMISGYIE----CGDLEKASHFFKVAPVRGVVA 219
Query: 269 GSGLIDLYAKCSG-DMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ +I Y K ++ + M F+++ +LV WN MISGY + D L F+ +
Sbjct: 220 WTAMITGYMKAKKVELAEAM--FKDMTVNKNLVTWNAMISGYVENSRPED-GLKLFRAML 276
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G P+ + CS LS LG+QIH + K + N ++ +L++MY KCG L
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGEL 335
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
DA +LF+ M + + V+ N+MI+GYAQHG +AL LF M++ I P ITFV+VL AC
Sbjct: 336 GDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC 395
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-- 503
H G V G YF M + EP+ +HY+CM+DLLGRAGKL +A +LI +MPF P +
Sbjct: 396 NHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAV 455
Query: 504 ---------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
+A AA LQL NA YV LANIYA+ +WE+VA +R+ M++
Sbjct: 456 FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKE 515
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
V K PG+SWIE++ ++H F + D HP + IH L+E+ +KMK AGY P+
Sbjct: 516 SNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHN 575
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KEK L+ HSEKLAVAFG + G I V KNLRICGDCH AIKFIS I REI
Sbjct: 576 VEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREII 635
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRDT RFH FKDG CSCGDYW
Sbjct: 636 VRDTTRFHHFKDGSCSCGDYW 656
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 196/403 (48%), Gaps = 30/403 (7%)
Query: 4 QVLKTCVGRRDLVTG-KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+++ CV D+ + H + KN + +++ L I + + AH F++
Sbjct: 66 KIIARCVRSGDIDGALRVFHGMRAKNTITWNSLL----IGISKDPSRMMEAHQLFDEIPE 121
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ FS+N++L+ Y R + A+ FD++P D S+NT+I+ YA G+ E A LF M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN-----NSLLTCYSRN 177
EK + +SG I L K H F A V +++T Y +
Sbjct: 182 MEKNEVSWNAMISGYIECGD----LEKASH-------FFKVAPVRGVVAWTAMITGYMKA 230
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
++ A+ +F +M K+ V+WN+M+ Y ++ + L+LF+ M+ + + L+S
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + L L G Q H + KS + + LI +Y KC G++ D K+FE + + D
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC-GELGDAWKLFEVMKKKD 349
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
+V WN MISGY+Q +D+AL F+++ PD +FV V+ AC++ ++G
Sbjct: 350 VVAWNAMISGYAQHGN-ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 357 ALTI---KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ K+E + + + +V + + G LE+A +L MP
Sbjct: 409 ESMVRDYKVEPQPDHYT---CMVDLLGRAGKLEEALKLIRSMP 448
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 326/544 (59%), Gaps = 36/544 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ L+ Y++ L +A+ +F EM + ++ VSW +M+ AY Q EAL LF EM+
Sbjct: 99 LRTRLIVLYNKCDCLGDARGMFDEMPQ-RNVVSWTAMISAYSQRGFAFEALNLFVEMLRS 157
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A+ILT+ G Q H+ IK + + +GS L+D+YAK SG + D
Sbjct: 158 DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAK-SGRICD 216
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF +P+ D+V +ISGY+Q ++AL F++L G + + ++ V++A S
Sbjct: 217 AHGVFHCLPERDVVACTAIISGYAQMG-LDEEALKLFRQLQIEGMNSNSVTYASVLTALS 275
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ + GKQ+H+ ++ + + + + N+L+ MYSKCGN+ ARR+FD MPE +S N
Sbjct: 276 GLAALNHGKQVHSHVLR-SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWN 334
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEG-QKYFSMMK 462
+M+ GY++HG+ E L LF+ M E N + P +IT+++VLS C+H G + +++M+
Sbjct: 335 AMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVN 394
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
G EP+ HY C++DLLGRAG++ +A I+ MPF P + I
Sbjct: 395 GKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIG 454
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+ L+LEP NA YV+L+N+YA++GKWE++ IR LM+++ V K+PG SW+E+ +
Sbjct: 455 IIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQI 514
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D +HP +E+ N ++E+S K K+ GYVPD KEK L+ HSEKL
Sbjct: 515 VHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKL 574
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL++T G I V+KNLRIC DCH+ KF+S + R + +RD RFH G CSC
Sbjct: 575 ALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSC 634
Query: 674 GDYW 677
GDYW
Sbjct: 635 GDYW 638
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 168/362 (46%), Gaps = 51/362 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L +C G TG+ +H++ +K +
Sbjct: 165 TFATILTSCYGSLGFETGRQIHSIAIK-------------------------------RN 193
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++F + LL YA+ RI A +F +P+ D+V+ +IS YA G E AL LF+
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + +++ T + ++TA S L KQ+H + G Y + NSL+ YS+ G
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASI 237
+ A+R+F M E + +SWN+M+V Y +H E L+LF+ M ++ D T ++
Sbjct: 314 NVCYARRIFDSMPE-RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAV 372
Query: 238 LTAFT--SLEDLVGGLQFHAHLI--KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L+ + LED+ GL+ +++ K G + H G ++DL + +G + + ++
Sbjct: 373 LSGCSHGQLEDM--GLEIFYNMVNGKDGIEPDIGHYGC-VVDLLGR-AGRVEEAFDFIKK 428
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+P P +W +++ +SD +G + P++ ++ SNL S
Sbjct: 429 MPFVPTAAIWGSLLGSC---RVHSDVEIGIIVGQKLLELEPENAGNYVIL---SNLYASA 482
Query: 352 GK 353
GK
Sbjct: 483 GK 484
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+++H IK + + + L+ +Y+KC L DAR +FD MP+ N VS +MI+ Y+
Sbjct: 81 GQRVHTHMIKTCYLPS-VYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYS 139
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
Q G EAL LF ML ++ P + TF ++L++C + G++ S+ +E
Sbjct: 140 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKR-NYESHM 198
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMP 498
S ++D+ ++G++ DA + +P
Sbjct: 199 FVGSSLLDMYAKSGRICDAHGVFHCLP 225
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 322/545 (59%), Gaps = 38/545 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ LL Y + L++A++V EM E K+ VSW +M+ Y Q EAL +F EM+
Sbjct: 88 LRTRLLIFYGKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALSVFAEMMRS 146
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A++LT+ L G Q H ++K + + +GS L+D+YAK +G + +
Sbjct: 147 DGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAK-AGQIEE 205
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++FE +P+ D+V +I+GY+Q ++AL F++L G P+ ++ +++A S
Sbjct: 206 AREIFECLPERDVVSCTAIIAGYAQLG-LDEEALEMFQRLQSEGMRPNYVTYASLLTALS 264
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ GKQ H ++ E+ + + N+L+ MYSKCGNL A+RLFD MPE +S N
Sbjct: 265 GLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWN 323
Query: 405 SMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEG--QKYFSMM 461
+M+ GY++HG+G E L LF M E + P +T ++VLS C+H GK+ + Y M+
Sbjct: 324 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH-GKMEDTGLSIYDGMV 382
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA------------- 508
+G +P+ EHY C++D+LGRAG++ +A I+ MP P + L +
Sbjct: 383 AGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 442
Query: 509 ----ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
+ +++EP NA YV+L+N+YA++G+WE+V +R +M + V K+PG SWI+ ++
Sbjct: 443 GEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQ 502
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
+H F A D +HP +E+ ++E+S KMKQAGYVPD KEK L+ HSEK
Sbjct: 503 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEK 562
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+ FGL++T G PI V KNLRIC DCHN K S + RE+++RD RFH G CS
Sbjct: 563 LALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICS 622
Query: 673 CGDYW 677
CGDYW
Sbjct: 623 CGDYW 627
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 178/344 (51%), Gaps = 25/344 (7%)
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
EMV L + + ++L A L G + HAH+IK+ + +++ + L+ Y KC
Sbjct: 41 EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 100
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
+ D KV +E+P+ ++V W MIS YSQ +S +AL F ++ R P++ +F V
Sbjct: 101 C-LEDARKVLDEMPEKNVVSWTAMISRYSQT-GHSSEALSVFAEMMRSDGKPNEFTFATV 158
Query: 341 ISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+++C S +LGKQIH L +K S+ I V ++L+ MY+K G +E+AR +F+ +PE +
Sbjct: 159 LTSCIRASGLALGKQIHGLIVKWNYDSH-IFVGSSLLDMYAKAGQIEEAREIFECLPERD 217
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYF 458
VS ++IAGYAQ G+ EAL +F+ + + P +T+ S+L+A + + G Q +
Sbjct: 218 VVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHC 277
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+++ F + + +ID+ + G L+ A+RL + MP
Sbjct: 278 HVLRRELPFYAVLQ--NSLIDMYSKCGNLSYAQRLFDNMP------------------ER 317
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
A+ + + Y+ G EV + RLMRD K + + V
Sbjct: 318 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 361
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 49/418 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L C+ +R L G+ +HA +K + YL ++ Y KC CL A ++
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV S + +IS Y+ G + ALS+F +
Sbjct: 114 EKNVVS-------------------------------WTAMISRYSQTGHSSEALSVFAE 142
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + FT + ++T+ ++ L L KQ+H L + +D + V +SLL Y++ G
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 202
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++EA+ +F + E +D VS +++ Y Q EAL++FQ + S + + T AS+LT
Sbjct: 203 IEEAREIFECLPE-RDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLT 261
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + L L G Q H H+++ + + + LID+Y+KC G++ ++F+ +P+ +
Sbjct: 262 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC-GNLSYAQRLFDNMPERTAI 320
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSPSLGK-QIHA 357
WN M+ GYS K + L F+ + + PD + + V+S CS+ GK +
Sbjct: 321 SWNAMLVGYS-KHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH-----GKMEDTG 374
Query: 358 LTIKIEIRSNRISVN------NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
L+I + + + +V M + G +++A RMP T + + G
Sbjct: 375 LSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 432
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 37/244 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C+ L GK +H L +K +N
Sbjct: 154 TFATVLTSCIRASGLALGKQIHGLIVK-----------------------------WNYD 184
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +F + LL YA+ +I AR++F+ +P+ D+VS +I+ YA G E AL +F+
Sbjct: 185 SH--IFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQ 242
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
++ + + T + L+TA S L L+ KQ HC + YA + NSL+ YS+
Sbjct: 243 RLQSEGMRPNYVTYASLLTALS-GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 301
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLAS 236
G L A+R+F M E + +SWN+M+V Y +H G E L+LF+ M ++ D TL +
Sbjct: 302 GNLSYAQRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 360
Query: 237 ILTA 240
+L+
Sbjct: 361 VLSG 364
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L G L GK H L+ +PF A L N I +YSKCG LS A F+
Sbjct: 255 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNM 314
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF-----DQIPQPDLVSYNTLISAYADCGDTESA 115
S+N +L Y++ +LF ++ +PD V+ ++S + ++
Sbjct: 315 PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTG 374
Query: 116 LSLFKDM 122
LS++ M
Sbjct: 375 LSIYDGM 381
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 325/544 (59%), Gaps = 36/544 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ L+ Y++ L +A+ +F EM + K+ VSW +M+ AY Q EAL LF EM+
Sbjct: 127 LRTRLIVLYNKCDCLGDAREMFDEMPQ-KNVVSWTAMISAYSQRGFAFEALNLFVEMLRS 185
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A+ILT+ G Q H+ IK + + +GS L+D+YAK SG + D
Sbjct: 186 DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAK-SGRICD 244
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF +P+ D+V +ISGY+Q ++AL F++L G + + ++ V++A S
Sbjct: 245 AHGVFHCLPERDVVACTAIISGYAQMG-LDEEALKLFRQLQIEGMNSNSVTYASVLTALS 303
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ + GKQ+H+ ++ + + + + N+L+ MYSKCGN+ ARR+FD MPE +S N
Sbjct: 304 GLAALNHGKQVHSHVLR-SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWN 362
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEG-QKYFSMMK 462
+M+ GY++HG+ E L LF+ M E N + P +IT+++VLS C+H G + +++M+
Sbjct: 363 AMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVN 422
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
G EP+ HY C++DLLGRAG++ +A I+ MPF P + I
Sbjct: 423 GKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIG 482
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+ L+LEP NA YV+L+N+YA++GKWE++ IR LM+++ V K+PG SW+E+ +
Sbjct: 483 IIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQI 542
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D +HP +E+ ++E+S K K+ GYVPD KEK L+ HSEKL
Sbjct: 543 VHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKL 602
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL++T G I V+KNLRIC DCH+ KF+S + R + +RD RFH G CSC
Sbjct: 603 ALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSC 662
Query: 674 GDYW 677
GDYW
Sbjct: 663 GDYW 666
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 181/364 (49%), Gaps = 43/364 (11%)
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
GQ +E L + + V + G D +IL S + G + H H+IK+ + +
Sbjct: 72 GQLKEALLQMAILGREVKFE-GYD-----TILNECVSQRAIREGQRVHTHMIKTCYLPSV 125
Query: 267 HIGSGLIDLYAKCS--GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
++ + LI LY KC GD R+ +F+E+PQ ++V W MIS YSQ+ ++ +AL F +
Sbjct: 126 YLRTRLIVLYNKCDCLGDARE---MFDEMPQKNVVSWTAMISAYSQR-GFAFEALNLFVE 181
Query: 325 LNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ R P+ +F ++++C +L G+QIH++ IK S+ + V ++L+ MY+K G
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESH-MFVGSSLLDMYAKSG 240
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+ DA +F +PE + V+ ++I+GYAQ G+ EAL+LF + + ++T+ SVL+
Sbjct: 241 RICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLT 300
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEH-----YSCMIDLLGRAGKLTDAERLIEAMP 498
A + + G++ S + G++ + +ID+ + G + A R+ ++MP
Sbjct: 301 ALSGLAALNHGKQVHSHVLR------SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 354
Query: 499 FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
+ + + Y+ G EV + +LMR+ K +
Sbjct: 355 ------------------ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 396
Query: 559 WIEV 562
++ V
Sbjct: 397 YLAV 400
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 168/362 (46%), Gaps = 51/362 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L +C G TG+ +H++ +K +
Sbjct: 193 TFATILTSCYGSLGFETGRQIHSIAIK-------------------------------RN 221
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++F + LL YA+ RI A +F +P+ D+V+ +IS YA G E AL LF+
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + +++ T + ++TA S L KQ+H + G Y + NSL+ YS+ G
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASI 237
+ A+R+F M E + +SWN+M+V Y +H E L+LF+ M ++ D T ++
Sbjct: 342 NVCYARRIFDSMPE-RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAV 400
Query: 238 LTAFT--SLEDLVGGLQFHAHLI--KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L+ + LED+ GL+ +++ K G + H G ++DL + +G + + ++
Sbjct: 401 LSGCSHGQLEDM--GLEIFYNMVNGKDGIEPDIGHYGC-VVDLLGR-AGRVEEAFDFIKK 456
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+P P +W +++ +SD +G + P++ ++ SNL S
Sbjct: 457 MPFVPTAAIWGSLLGSC---RVHSDVEIGIIVGQKLLELEPENAGNYVIL---SNLYASA 510
Query: 352 GK 353
GK
Sbjct: 511 GK 512
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/665 (36%), Positives = 347/665 (52%), Gaps = 71/665 (10%)
Query: 81 IASARQLFDQI--PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI 138
++ A LF I P++ +NTLI A++ S+L LF M + T L
Sbjct: 75 LSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLF 134
Query: 139 T--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-------------------- 176
A S KQLH A+ + V+ SL+ YS+
Sbjct: 135 KSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAV 194
Query: 177 -----------NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
G +D+A+R+F E+ KD VSWN+M+ Y Q EAL F M
Sbjct: 195 SFTALITGYVSEGHVDDARRLFDEI-PAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA 253
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + T+ S+L+A L L G + + GF +N + + L+D+Y+KC G++
Sbjct: 254 DVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKC-GEIGT 312
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
K+F+ + D++LWNTMI GY Y ++AL F+ + R P+D +F+ V+ AC+
Sbjct: 313 ARKLFDGMEDKDVILWNTMIGGYCHLSLY-EEALVLFEVMLRENVTPNDVTFLAVLPACA 371
Query: 346 NLSP-SLGKQIHAL---TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+L LGK +HA +K N +S+ +++ MY+KCG +E A ++F M +
Sbjct: 372 SLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLA 431
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S N+MI+G A +G AL LFE M+ P +ITFV VLSAC G V G +YFS M
Sbjct: 432 SWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM 491
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI---ALKA--------- 508
+G P+ +HY CMIDLL R+GK +A+ L+ M P G+I L A
Sbjct: 492 NKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEF 551
Query: 509 ----ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A +LEP N+ YV+L+NIYA +G+W++VA IR + D+G++K PG + IE+
Sbjct: 552 GEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDG 611
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
+H F+ D HP + I L+E+ R +++ G+VPD KE L HSEK
Sbjct: 612 VVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEK 671
Query: 613 LAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
LA+AFGL+ST G I ++KNLR+C +CH+A K IS I REI RD RFH FKDG CS
Sbjct: 672 LAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCS 731
Query: 673 CGDYW 677
C D W
Sbjct: 732 CNDRW 736
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 164/342 (47%), Gaps = 36/342 (10%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLT--CYSRNGFLDEAKRVFYEMGEIKDEV-SWNSMVV 204
+KQ+H L I G + + L+ S + L A +F+ + + WN+++
Sbjct: 41 LKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIR 100
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
A+ +L LF +M+ L + +T S+ + + Q HAH +K H
Sbjct: 101 AHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL 160
Query: 265 NSHIGSGLIDLYAKCS------------------------------GDMRDCMKVFEEIP 294
+ H+ + LI +Y++ G + D ++F+EIP
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGK 353
D+V WN MI+GY Q + ++AL CF ++ P+ + V V+SAC +L S LGK
Sbjct: 221 AKDVVSWNAMIAGYVQSGRF-EEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGK 279
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
I + N + + NALV MYSKCG + AR+LFD M + + + N+MI GY
Sbjct: 280 WIGSWVRDRGFGKN-LQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHL 338
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ EAL LFE ML N+ P ++TF++VL ACA G + G+
Sbjct: 339 SLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGK 380
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 38/281 (13%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYA-KCSGDMRDCMKVFEEI--PQPDLVLWNTMISGY 308
Q H+ +IKSG H S LI+ A S D+ + +F I P++ +WNT+I +
Sbjct: 43 QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSN 367
S + +L F ++ G +P+ +F + +C+ + KQ+HA +K+ + +
Sbjct: 103 SLTPTPT-SSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161
Query: 368 RISVNNALVAMYSKCGNL-------------------------------EDARRLFDRMP 396
V+ +L+ MYS+ G L +DARRLFD +P
Sbjct: 162 P-HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ VS N+MIAGY Q G EAL F M E ++ P T VSVLSAC H + G+
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S ++D GF + + ++D+ + G++ A +L + M
Sbjct: 281 IGSWVRDR-GFGKNLQLVNALVDMYSKCGEIGTARKLFDGM 320
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/478 (42%), Positives = 293/478 (61%), Gaps = 40/478 (8%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+T ++ILTA + V + HA IK + ++ +G+ L+D Y K G++ + KVF+
Sbjct: 11 FTYSTILTA----QPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVK-RGNVDEASKVFQ 65
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
I + D+V W+ MI GY+Q + ++ A+ F ++ + P++ +F +I+AC+ + +
Sbjct: 66 RIEEKDIVAWSAMICGYAQIGD-TEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGV 124
Query: 352 --GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GKQ+HA +IK +N + V++AL+ MYSK G++E A +F R E + VS NS+I+G
Sbjct: 125 EQGKQLHAWSIKSRF-NNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISG 183
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YAQHG G +AL +FE M N+ +TF+ V+SAC HTG EGQ+YF +M EP
Sbjct: 184 YAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEP 243
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------------IALKAANH 511
EHYSCM+DL GRAG L A +I MPF P S + AA+
Sbjct: 244 RMEHYSCMVDLYGRAGMLVKAMEIINEMPF-PASANVWRTLLAASCIHRNLEVGKLAADK 302
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
+ L+P N YV+L N+YA+ G W+E A +R+LM ++ V+K G+SWIEVK + + F+A
Sbjct: 303 LISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLA 362
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
D SHP+ +I+ LEE+S ++K AGY PD KE L HSE+LA+AFGL
Sbjct: 363 GDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGL 422
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ T G P+ ++KNLR+CGDCH+ IK IS + GR+I VRD+ RFH FK G CSCGDYW
Sbjct: 423 IGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 171/345 (49%), Gaps = 9/345 (2%)
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
M + + FT S ++TA ++H AI + SV +LL Y + G +D
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPF--EMHAQAIKRNYVKSPSVGTALLDAYVKRGNVD 58
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA +VF + E KD V+W++M+ Y Q + A+++F +M ++ + YT + I+ A
Sbjct: 59 EASKVFQRIEE-KDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINAC 117
Query: 242 TSLEDLV-GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ V G Q HA IKS F+ + S L+ +Y+K GD+ +VF+ + DLV
Sbjct: 118 AAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSK-RGDIESAFEVFKRQRERDLVS 176
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
WN++ISGY+Q Y +AL F+++ R D +F+ VISAC++ + G++ +
Sbjct: 177 WNSIISGYAQ-HGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIM 235
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGME 418
+K R+ + +V +Y + G L A + + MP + ++ +++A H +E
Sbjct: 236 VKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHR-NLE 294
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+L L + P ++V + + A G E K +M++
Sbjct: 295 VGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEE 339
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 135/247 (54%), Gaps = 17/247 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL AY ++ + A ++F +I + D+V+++ +I YA GDTE A+ +F M +++ +
Sbjct: 47 LLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPN 106
Query: 131 GFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
+T SG+I A + + KQLH +I F++ V+++LLT YS+ G ++ A VF
Sbjct: 107 EYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVF 166
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
E +D VSWNS++ Y QH G +AL++F+EM L +D T +++A T
Sbjct: 167 KRQRE-RDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLA 225
Query: 248 VGGLQFHAHLIKSGFHQNSHIG------SGLIDLYAKCSGDMRDCMKVFEEIPQPDLV-L 300
G ++ ++K + HI S ++DLY + +G + M++ E+P P +
Sbjct: 226 NEGQRYFDIMVK-----DHHIEPRMEHYSCMVDLYGR-AGMLVKAMEIINEMPFPASANV 279
Query: 301 WNTMISG 307
W T+++
Sbjct: 280 WRTLLAA 286
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ LL Y+++ I SA ++F + + DLVS+N++IS YA G AL +F++M+ + +
Sbjct: 147 SALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLE 206
Query: 129 TDGFTLSGLITASSNNL----------CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DG T G+I+A ++ ++K H I +HY+ ++ Y R G
Sbjct: 207 MDGVTFIGVISACTHTGLANEGQRYFDIMVKDHH---IEPRMEHYS----CMVDLYGRAG 259
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE-MVSLQ 226
L +A + EM W +++ A HR LE +L + ++SLQ
Sbjct: 260 MLVKAMEIINEMPFPASANVWRTLLAASCIHR-NLEVGKLAADKLISLQ 307
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/667 (34%), Positives = 356/667 (53%), Gaps = 49/667 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H F + L+ YA+ + +AR++FD +P+ ++V + TL++ Y E
Sbjct: 5 HVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEV 64
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F DM E FTLS + A S+ ++ L KQ H I H +S+ N+L +
Sbjct: 65 AVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCS 124
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G LD + + F E GE KD +SW +++ A G + L+LF EM+ + + +
Sbjct: 125 LYSKFGSLDSSVKAFRETGE-KDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDF 183
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S+L+ ++++ G+Q H+ K G N I + L+ LY KC G + + +F
Sbjct: 184 TLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKC-GCIDEAKNLFNR 242
Query: 293 IPQPDLVLWNTMISGYSQ-----KEEYSDQ-----ALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +L+ WN MI+G++Q K+ +S Q ALG + KLNR G PD + +++
Sbjct: 243 MEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILT 302
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
CS L+ G+QIHA TIK S+ + V ALV MY KCG++E AR+ F M +
Sbjct: 303 VCSRLAALEQGEQIHAQTIKSGFLSD-VVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S SMI +A+HG AL+LFE M P ITFV VL+AC+H G V E +YF +M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SI 504
+ + +P +HY C++D+ R G+L +A +I+ M P +
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA L+L+P + YV+L N+Y ++ +WE+V+ +RRLM++ V K +S I +K
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-------VPDKE---------KRLVH 608
++H F + H E+H L ++ + K GY V D E V+
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVY 601
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLAV FGLL+T G PI V+K++ +C DCH+ +K +S+ R I ++D R H F +
Sbjct: 602 HSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVN 661
Query: 669 GRCSCGD 675
G+CSC D
Sbjct: 662 GQCSCAD 668
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 212/465 (45%), Gaps = 64/465 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L C + GK HA +K + + + N LYSK G L ++ AF +T
Sbjct: 83 TLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRET 142
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ D++S+ T+ISA D G L LF
Sbjct: 143 -------------------------------GEKDVISWTTIISACGDNGRAGMGLRLFI 171
Query: 121 DMREKRFDTDGFTLSGLI----TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M + + + FTL+ ++ T S++L + Q+H L+ G + + NSL+ Y +
Sbjct: 172 EMLFENVEPNDFTLTSVLSLCSTIQSSDLGM--QVHSLSTKLGHESNLRITNSLVYLYLK 229
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-----------HREGLEALQLFQEMVSL 225
G +DEAK +F M E K+ ++WN+M+ + Q + G EAL ++ ++
Sbjct: 230 CGCIDEAKNLFNRM-EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRS 288
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
D++TL+SILT + L L G Q HA IKSGF + +G+ L+D+Y KC G +
Sbjct: 289 GRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKC-GSIER 347
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
K F ++ L+ W +MI+ +++ + S AL F+ + G+ P+ +FV V++ACS
Sbjct: 348 ARKAFLDMSTRTLISWTSMITSFARHGQ-SQHALQLFEDMRLAGFRPNQITFVGVLAACS 406
Query: 346 NLSPSLGKQIHALTIKIEIRSNRISVN------NALVAMYSKCGNLEDARRLFDRMP-EH 398
+ G AL EI + LV M+ + G L++A + RM E
Sbjct: 407 H----AGMVDEALEY-FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEP 461
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
N +IAG HG E +L+ P + T+V +L+
Sbjct: 462 NEFIWLLLIAGCRNHGNEELGFYAAEQLLKLK-PRSTETYVVLLN 505
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 136/247 (55%), Gaps = 5/247 (2%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
HAH+IK+G H+ + S L+++YAKC G M + KVF+ +P+ ++V+W T+++GY Q +
Sbjct: 3 HAHVIKTGTHEEFFVMSFLVNVYAKC-GVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN 372
+ A+ F + G P + + ++ACS+L S +LGKQ HA IK I S+ S+
Sbjct: 62 -PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRI-SHDSSIG 119
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
NAL ++YSK G+L+ + + F E + +S ++I+ +G LRLF ML N+
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVE 179
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P + T SVLS C+ G + S+ + G E + ++ L + G + +A+
Sbjct: 180 PNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKL-GHESNLRITNSLVYLYLKCGCIDEAKN 238
Query: 493 LIEAMPF 499
L M +
Sbjct: 239 LFNRMEY 245
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/643 (34%), Positives = 356/643 (55%), Gaps = 30/643 (4%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ +V N +L Y + A +LFD++ + + VS T+ISAYA+ G + A+ LF
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + L+ + N L +Q+H I G S+ ++ Y + G
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+L AKRVF +M +K V+ ++V Y Q +AL+LF ++V+ + D + + +L
Sbjct: 234 WLVGAKRVFDQMA-VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SLE+L G Q HA + K G +G+ L+D Y KCS C + F+EI +P+
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC-RAFQEIREPND 351
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
V W+ +ISGY Q ++ ++A+ FK L ++ + ++ + ACS L+ ++G Q+H
Sbjct: 352 VSWSAIISGYCQMSQF-EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A IK + ++ +AL+ MYSKCG L+DA +F+ M + V+ + I+G+A +G
Sbjct: 411 ADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EALRLFE M+ + P ++TF++VL+AC+H G V +G+ M + P +HY C
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSN 519
MID+ R+G L +A + ++ MPF P +++ K A QL+P +
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPED 589
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+ N+Y +GKWEE A + +LM +R ++K+ SWI+ K ++H F+ D HP
Sbjct: 590 TAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQT 649
Query: 580 KEIHNYLEEMSRKMKQAGY---VPDKEKRLVHHSEKLAVAFGLLST--SYGEPILVMKNL 634
+EI+ L+E M+ + + ++ ++L+ HSE+LA+AFGL+S + PI V KNL
Sbjct: 650 QEIYEKLKEFDGFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNL 709
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R C DCH K +S + G EI +RD+ RFH FK+G+CSC DYW
Sbjct: 710 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 169/379 (44%), Gaps = 28/379 (7%)
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
++ ++ G+++ N +V+ +HR+ EA + QEM + + Y+ + A L
Sbjct: 42 KISHKQGQVE-----NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACREL 96
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G H + + + + + ++ +Y +C + D K+F+E+ + + V TM
Sbjct: 97 RSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRS-LEDADKLFDEMSELNAVSRTTM 155
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIE 363
IS Y++ + D+A+G F + G P + ++ + N + G+QIHA I+
Sbjct: 156 ISAYAE-QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ SN S+ +V MY KCG L A+R+FD+M V+ ++ GY Q G +AL+LF
Sbjct: 215 LCSN-TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
++ + + F VL ACA ++ G++ + + + G E E + ++D +
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL-GLESEVSVGTPLVDFYIK 332
Query: 484 AGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
A R F ++ N V + + + Y ++EE
Sbjct: 333 CSSFESACRA------------------FQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 544 RLMRDRGVQKKPGFSWIEV 562
+ +R + F++ +
Sbjct: 375 KSLRSKNASILNSFTYTSI 393
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 60/323 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK C +L GK +HA K + + + Y KC +A AF +
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N S ++ +IS Y E A+ FK
Sbjct: 347 REPNDVS-------------------------------WSAIISGYCQMSQFEEAVKTFK 375
Query: 121 DMREKRFDT-DGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+R K + FT + + A S + + Q+H AI ++L+T YS+
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LD+A VF M D V+W + + + + EAL+LF++MVS + + T ++
Sbjct: 436 GCLDDANEVFESMDN-PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH------QNSHIGSG------LIDLYAKCSGDMRD 285
LTA + HA L++ G H + ++ +ID+YA+ SG + +
Sbjct: 495 LTACS-----------HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR-SGLLDE 542
Query: 286 CMKVFEEIP-QPDLVLWNTMISG 307
+K + +P +PD + W +SG
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 50/250 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ + + C D G +HA +K + S Y + I +YSKCGCL A+
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN------ 442
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F+ + PD+V++ IS +A G+ AL LF+
Sbjct: 443 -------------------------EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 477
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M + T ++TA S+ + + HCL + DHY + ++
Sbjct: 478 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY----DCMIDI 533
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-------GLEALQLFQE-MVSL 225
Y+R+G LDEA + M D +SW + H+ G E QL E
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGY 593
Query: 226 QLGLDMYTLA 235
L ++YT A
Sbjct: 594 VLPFNLYTWA 603
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/685 (34%), Positives = 350/685 (51%), Gaps = 101/685 (14%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA + +V+ N L+ YA + SAR++F++ P DLVS+NTL++ Y G+ E
Sbjct: 130 HAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEE 189
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
A +F+ M E+ +NS++ +
Sbjct: 190 AERVFEGMPERN-------------------------------------TIASNSMIALF 212
Query: 175 SRNGFLDEAKRVFYEM-GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
R G +++A+R+F + G +D VSW++MV Y Q+ G EAL LF EM + +D
Sbjct: 213 GRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVV 272
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS------------- 280
+ S L+A + + ++ G H +K G + + LI LY+ C
Sbjct: 273 VVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGG 332
Query: 281 ------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
G ++D +F +P+ D+V W+ MISGY+Q E +S +AL F
Sbjct: 333 ELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFS-EALALF 391
Query: 323 KKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
+++ G PD+ + V ISAC++L+ LGK IHA + +++ N I ++ L+ MY K
Sbjct: 392 QEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVI-LSTTLIDMYMK 450
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG +E+A +F M E + N++I G A +G ++L +F M +T P ITF+ V
Sbjct: 451 CGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGV 510
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
L AC H G V +G+ YF+ M E +HY CM+DLLGRAG L +AE LI++MP P
Sbjct: 511 LGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAP 570
Query: 502 -----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
+ + +QL+P + +V+L+NIYA+ G W V IR
Sbjct: 571 DVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRG 630
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---- 600
+M GV K PG S IE +H F+A D +HP I +I + L+ ++ K+K GYVP
Sbjct: 631 IMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSE 690
Query: 601 --------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
+KE L HSEKLAVAFGL++ S PI V KNLRIC DCH +K IS
Sbjct: 691 VSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFD 750
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
R+I VRD +RFH FK G CSC D+W
Sbjct: 751 RDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 206/468 (44%), Gaps = 79/468 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L+ C R G+ LHA + + Y+ N + LY+ CG + +A F ++
Sbjct: 107 TYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEES 166
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP---------------------------- 92
++ S+N LLA Y + + A ++F+ +P
Sbjct: 167 PVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFN 226
Query: 93 -----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NL 145
+ D+VS++ ++S Y E AL LF +M+ D + ++A S N+
Sbjct: 227 GVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNV 286
Query: 146 CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI------------ 193
+ + +H LA+ G + Y S+ N+L+ YS G + +A+R+F + GE+
Sbjct: 287 EMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISG 346
Query: 194 -------------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
KD VSW++M+ Y QH EAL LFQEM + D L
Sbjct: 347 YLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETAL 406
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S ++A T L L G HA++ ++ N + + LID+Y KC G + + ++VF +
Sbjct: 407 VSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKC-GCVENALEVFYAME 465
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS---- 350
+ + WN +I G + +Q+L F + + G P++ +F+ V+ AC ++
Sbjct: 466 EKGVSTWNAVILGLAMNGSV-EQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGR 524
Query: 351 --LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
IH I+ I+ +V + + G L++A L D MP
Sbjct: 525 HYFNSMIHEHKIEANIKH-----YGCMVDLLGRAGLLKEAEELIDSMP 567
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 196/455 (43%), Gaps = 87/455 (19%)
Query: 39 HFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVS 98
HF L S+ + ++ N S + L + LRI F+ + P+ +
Sbjct: 18 HFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI------FNHLRNPNTFT 71
Query: 99 YNTLISAYADCGDT-ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLA 155
+NT++ A+ ++ AL +K D +T L+ + + +QLH A
Sbjct: 72 WNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHA 131
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
+ GFD V N+L+ Y+ G + A+RVF E + D VSWN+++ Y Q E EA
Sbjct: 132 VSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEE-SPVLDLVSWNTLLAGYVQAGEVEEA 190
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
++F+ M +N+ + +I L
Sbjct: 191 ERVFEGMPE---------------------------------------RNTIASNSMIAL 211
Query: 276 YAKCSGDMRDCMKVFEEI--PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+ + G + ++F + + D+V W+ M+S Y Q E ++AL F ++ G D
Sbjct: 212 FGR-KGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQN-EMGEEALVLFVEMKGSGVAVD 269
Query: 334 DCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ V +SACS L+ +G+ +H L +K+ + + +S+ NAL+ +YS CG + DARR+F
Sbjct: 270 EVVVVSALSACSRVLNVEMGRWVHGLAVKVGVE-DYVSLKNALIHLYSSCGEIVDARRIF 328
Query: 393 D--------------------------------RMPEHNTVSLNSMIAGYAQHGIGMEAL 420
D MPE + VS ++MI+GYAQH EAL
Sbjct: 329 DDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEAL 388
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
LF+ M + P VS +SAC H + G+
Sbjct: 389 ALFQEMQLHGVRPDETALVSAISACTHLATLDLGK 423
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 169/367 (46%), Gaps = 25/367 (6%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ-TQHAN 64
L C ++ G+ +H L +K V L N I LYS CG + A F+ + +
Sbjct: 277 LSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLD 336
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ S+N +++ Y R I A LF +P+ D+VS++ +IS YA AL+LF++M+
Sbjct: 337 LISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQL 396
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D L I+A ++ L L K +H ++ +L+ Y + G ++
Sbjct: 397 HGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVEN 456
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A VFY M E K +WN++++ + ++L +F +M + T +L A
Sbjct: 457 ALEVFYAMEE-KGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACR 515
Query: 243 SLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-P 296
+ + G + H H I++ H G ++DL + +G +++ ++ + +P P
Sbjct: 516 HMGLVNDGRHYFNSMIHEHKIEANI---KHYGC-MVDLLGR-AGLLKEAEELIDSMPMAP 570
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNR--VGYHPDDCSFVCVISACSNLSPSLGKQ 354
D+ W ++ G +K + D +G ++L R + PD F ++ SN+ S G
Sbjct: 571 DVATWGALL-GACRK--HRDNEMG--ERLGRKLIQLQPDHDGFHVLL---SNIYASKGNW 622
Query: 355 IHALTIK 361
+ L I+
Sbjct: 623 GNVLEIR 629
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-S 345
+++F + P+ WNT++ + + QAL +K PD ++ ++ C +
Sbjct: 58 LRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAA 117
Query: 346 NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+S G+Q+HA + + + V N L+ +Y+ CG++ ARR+F+ P + VS N+
Sbjct: 118 RVSEFEGRQLHAHAVSSGFDGD-VYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
++AGY Q G EA R+FE M E N +N S+++ G V + ++ F+ ++
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPERNTIASN----SMIALFGRKGCVEKARRIFNGVR--- 229
Query: 466 GFEPEGEHYSCMI 478
G E + +S M+
Sbjct: 230 GRERDMVSWSAMV 242
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/723 (33%), Positives = 379/723 (52%), Gaps = 81/723 (11%)
Query: 23 ALYLKNLV---PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY---- 75
+L+LK ++ P +++ + LL + C + + +QT + S ++ L
Sbjct: 19 SLFLKRMISNTPLHSFVKSPISLLET-CNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFC 77
Query: 76 --ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
+ AR++FD+IPQP + +NT+I Y+ +ES +SL+K M DGFT
Sbjct: 78 CTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFT 137
Query: 134 LSGLITASSNNLCLI--KQLHCLAIYCGF-DHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
L+ + ++ L K L A+ GF D V + +S G ++ A+++F +M
Sbjct: 138 FPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIF-DM 196
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL--QLGLDMYTLASILTAFTSLEDLV 248
G+ + V+WN ++ Y + + E+ +LF EM + + TL +L+A + L+DLV
Sbjct: 197 GDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLV 256
Query: 249 GGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDM------------RDCM-------- 287
GG + IK G + N + + LID++A C G+M RD +
Sbjct: 257 GGKCIYNKYIKEGIVEPNLILENALIDMFASC-GEMDAARGVFDEMKTRDVISWTSIVTG 315
Query: 288 -----------KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
K F+++P+ D V W MI GY + + + L F+ + PD+ +
Sbjct: 316 FANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFK-EVLTLFRDMQMSNVKPDEFT 374
Query: 337 FVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V +++AC++L LG+ K +I+ N + NAL+ MY KCGN+E A+++F+ M
Sbjct: 375 MVSILTACAHLGALELGEWAKTYIDKNKIK-NDTFIGNALIDMYFKCGNVEKAKKIFNEM 433
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ + + +MI G A +G G EAL +F +MLE ++ P IT++ V+ AC H G VA+G+
Sbjct: 434 QKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGK 493
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI----------- 504
+FS M G +P HY CM+DLLGRAG L +A +I MP P SI
Sbjct: 494 HFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRV 553
Query: 505 ------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
A AAN L+LEP N YV+L NIYAA KW+ + +R++M +RG++K PG S
Sbjct: 554 HKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCS 613
Query: 559 WIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRL 606
+E+ ++ FVA D SHP KEI+ LE M + + AGY P DKE L
Sbjct: 614 LMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETAL 673
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
HSEKLA+A+ L+S+ G I ++KNLR+C DCH+ +S + RE+ VRD RFH F
Sbjct: 674 YMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHF 733
Query: 667 KDG 669
+ G
Sbjct: 734 RHG 736
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 166/314 (52%), Gaps = 11/314 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T +L C +DLV GK ++ Y+K +V + L N I +++ CG + AA F++
Sbjct: 241 TLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDE 300
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ +V S+ ++ +A RI AR+ FDQ+P+ D VS+ +I Y + L+LF
Sbjct: 301 MKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF 360
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSR 176
+DM+ D FT+ ++TA + +L ++ Y + + + N+L+ Y +
Sbjct: 361 RDMQMSNVKPDEFTMVSILTACA-HLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFK 419
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++AK++F EM + KD+ +W +M+V + G EAL +F M+ + D T
Sbjct: 420 CGNVEKAKKIFNEMQK-KDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIG 478
Query: 237 ILTAFTSLEDLVGGLQFHAHL-IKSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++ A T + + G F +++ ++ G N +H G ++DL + +G +++ ++V +P
Sbjct: 479 VMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGC-MVDLLGR-AGHLKEALEVIMNMP 536
Query: 295 -QPDLVLWNTMISG 307
+P+ ++W +++
Sbjct: 537 VKPNSIVWGSLLGA 550
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/656 (34%), Positives = 339/656 (51%), Gaps = 65/656 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A +F+ IP+P+ N + + + E L +++ MR + D F+ L+ A S
Sbjct: 75 ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSR 134
Query: 144 NLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
L++ ++H LA GFD V L+ Y+ G + EA+ +F +M +D V+W+
Sbjct: 135 VKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFH-RDVVTWSI 193
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Y Q +AL LF+EM + + D L+++L+A +L G H ++++
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253
Query: 262 FHQNSHIGSGLIDLYAKCS------------------------------GDMRDCMKVFE 291
+ H+ S L+ +YA C G + + VF
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
++ + DLV W+ MISGY++ + +AL F ++ +G PD + + VI+AC++L
Sbjct: 314 QMVKKDLVCWSAMISGYAESDS-PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALD 372
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
K IH K + +NNAL+ MY+KCG+LE ARR+FD+MP N +S MI+ +
Sbjct: 373 QAKWIHLFVDKNGF-GGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAF 431
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A HG ALR F M + NI P ITFV VL AC+H G V EG+K F M + P+
Sbjct: 432 AMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPK 491
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFL 513
HY CM+DL GRA L +A L+EAMP P G I L AA L
Sbjct: 492 HVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLL 551
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+L+P + +V L+NIYA + +WE+V +R+LM+ +G+ K+ G S E+ ++H F+ D
Sbjct: 552 ELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVAD 611
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLS 621
SH EI+ L E+ K+K GY P+ LV HSEKLA+ +GL+
Sbjct: 612 RSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMR 671
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I ++KNLR+C DCH IK S + REI VRD RFH +KDG CSC DYW
Sbjct: 672 DGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 158/307 (51%), Gaps = 6/307 (1%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C +L GK +H ++N + +L + + +Y+ CG + A + F + N
Sbjct: 229 VLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKN 288
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ + ++ Y++ +I +AR +F+Q+ + DLV ++ +IS YA+ + AL+LF +M+
Sbjct: 289 LVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQS 348
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D T+ +ITA ++ L K +H GF +NN+L+ Y++ G L+
Sbjct: 349 LGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLER 408
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+R+F +M K+ +SW M+ A+ H + AL+ F +M + + T +L A +
Sbjct: 409 ARRIFDKMPR-KNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACS 467
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSG-LIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ G + +I H+ G ++DL+ + + +R+ +++ E +P P++++
Sbjct: 468 HAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGR-ANLLREALELVEAMPLAPNVII 526
Query: 301 WNTMISG 307
W ++++
Sbjct: 527 WGSLMAA 533
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 132/358 (36%), Gaps = 90/358 (25%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L K +H KN + ++N I +Y+KCG L A F++
Sbjct: 357 TMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKM 416
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV S+ +++A+A GD SAL F
Sbjct: 417 PRKNVISWTCMISAFAMH-------------------------------GDAGSALRFFH 445
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M ++ + +G T G++ A S+ G +
Sbjct: 446 QMEDENIEPNGITFVGVLYACSH---------------------------------AGLV 472
Query: 181 DEAKRVFYEM----GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+E +++FY M V + MV +G+ EAL+L + M L ++ S
Sbjct: 473 EEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM---PLAPNVIIWGS 529
Query: 237 ILTAFTSLEDLVGGLQFHAH--LIKSGFHQNSHIGSGLIDLYAKCS-----GDMRDCMK- 288
++ A ++ G +F A L H +H+ L ++YAK G +R MK
Sbjct: 530 LMAACRVHGEIELG-EFAAKRLLELDPDHDGAHV--FLSNIYAKARRWEDVGQVRKLMKH 586
Query: 289 --VFEEIPQPDLVLWNT----MISGYSQK--EEYSDQALGCFKKLNRVGYHPDDCSFV 338
+ +E L N +++ S K +E ++ KL VGY P+ CS +
Sbjct: 587 KGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSIL 644
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/548 (38%), Positives = 309/548 (56%), Gaps = 34/548 (6%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
D ++N L+ Y + G L EAKRVF M + K+ SW ++ + Q G+EA+QLF
Sbjct: 72 LDRPRFLSNLLVDMYGKCGSLVEAKRVFDAM-QHKNVFSWTMLMAGFVQSGRGVEAIQLF 130
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
M D L + + + + L G + H+ G + + +I++Y KC
Sbjct: 131 HRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKC 190
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + + VF +P+ +++ W+TMI+ + Q E +D+AL FK + + G D ++V
Sbjct: 191 -GSIGEAFAVFTRMPEKNVISWSTMIAAFCQNE-LADEALLFFKLMQQEGMELDRITYVS 248
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
V+ A +++ LGK +H + + ++ I V N LV MY KCG+ +DAR +FD M E
Sbjct: 249 VLDAYTSVGALELGKALHVRIVYAGLDTS-IVVGNTLVNMYGKCGSPDDARDVFDSMVEK 307
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
N VS N+M+A Y Q+G EAL LF+ M + P +ITFV++L C+H+GK + +F
Sbjct: 308 NVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHF 367
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---------- 508
M+ FG P H+ C+ID+LGR+GKL +AE LI+AMP ++ +
Sbjct: 368 VEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKD 427
Query: 509 -------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
A Q EP A Y+ML+N+YAA KW+E A +R+ M GV+K+ G SWIE
Sbjct: 428 EDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIE 487
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHH 609
+ KQ+H FVA D HP I L+ + +M+ GY PD K++ L +H
Sbjct: 488 IDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYH 547
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEKLAVAFG+ ST P+ ++KNLR+C DCH+AIKFIS + GR ITVRD+ RFH F G
Sbjct: 548 SEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRG 607
Query: 670 RCSCGDYW 677
CSCGDYW
Sbjct: 608 ECSCGDYW 615
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 189/404 (46%), Gaps = 49/404 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
Q+++ C G + L G+ +H + +LSN + +Y KCG L A F+ Q
Sbjct: 44 LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQ 103
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALS 117
H NVFS+ +L+A + + R A QLF ++ Q PD V+ I + CG
Sbjct: 104 HKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDS---CG------- 153
Query: 118 LFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
++ L +++H A CG D N+++ Y +
Sbjct: 154 -----------------------AAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKC 190
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + EA VF M E K+ +SW++M+ A+ Q+ EAL F+ M + LD T S+
Sbjct: 191 GSIGEAFAVFTRMPE-KNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSV 249
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A+TS+ L G H ++ +G + +G+ L+++Y KC G D VF+ + + +
Sbjct: 250 LDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKC-GSPDDARDVFDSMVEKN 308
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
+V WN M++ Y Q S +AL F ++ G P+D +FV ++ CS+ GK A
Sbjct: 309 VVSWNAMLAAYGQNGR-SREALALFDSMDLEGVRPNDITFVTILYCCSH----SGKFKDA 363
Query: 358 LTIKIEIRSN-----RISVNNALVAMYSKCGNLEDARRLFDRMP 396
++ +E+R + R L+ M + G LE+A L MP
Sbjct: 364 VSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMP 407
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 242/761 (31%), Positives = 384/761 (50%), Gaps = 97/761 (12%)
Query: 6 LKTCVGRRDLVTGKSLHALYLK--NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
L+ C+ R D G+++H ++ + + +N + +Y K G L++A F++
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 64 NVFSFNVLLAAYARQLRIASARQLF-------DQIPQPDLVSY----------------- 99
N+ SF L+ A+A++ +A LF ++ Q L +
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185
Query: 100 ---------------NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN 144
+ LI AY+ C A +F + K D + +++ S N
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK----DAVVWTAMVSCYSEN 241
Query: 145 LCLIKQLHC------LAIYCGF------------DHYASVNNSLLTCYSRNGFLDEAKRV 186
C C LAI C D V +LL Y++ G + +A R+
Sbjct: 242 DCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA-RL 300
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
+EM D + + M+ Y Q + +A +LF ++ + + Y+L+S+L A T++
Sbjct: 301 AFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQ 360
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H H IK G + +G+ L+D YAKC+ DM +K+F + + V WNT++
Sbjct: 361 LDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN-DMDSSLKIFSSLRDANEVSWNTIVV 419
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIR 365
G+SQ ++AL F ++ ++ V+ AC S S QIH +I+
Sbjct: 420 GFSQSG-LGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC-SIEKSTF 477
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+N + N+L+ Y+KCG + DA ++F + E + +S N++I+GYA HG +AL LF+
Sbjct: 478 NNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDR 537
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M ++N+ +ITFV++LS C TG V G F M+ G +P EHY+C++ LLGRAG
Sbjct: 538 MNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAG 597
Query: 486 KLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLAN 528
+L DA + I +P P ++ +A A L++EP + YV+L+N
Sbjct: 598 RLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSN 657
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
+YAA+G ++VA +R+ MR+ GV+K PG SW+E+K ++H F HP ++ I+ LE
Sbjct: 658 MYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEW 717
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
++ K + GY+PD K + L HSE+LA+A+GL+ T G PI ++KNLR
Sbjct: 718 LNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRS 777
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH A IS I REI VRD RFH F+DG+CSCGDYW
Sbjct: 778 CLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 40/338 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ VL+ C L GK +H +K ++ N + Y+KC + ++ F+
Sbjct: 347 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AN VS+NT++ ++ G E ALS+F
Sbjct: 407 RDANE-------------------------------VSWNTIVVGFSQSGLGEEALSVFC 435
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ + T S ++ A ++ + Q+HC F++ + NSL+ Y++ G
Sbjct: 436 EMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCG 495
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ +A +VF + E +D +SWN+++ Y H + +AL+LF M + + T ++L
Sbjct: 496 YIRDALKVFQHLME-RDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 554
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-P 296
+ S + GL F + I G + + ++ L + +G + D ++ +IP P
Sbjct: 555 SVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR-AGRLNDALQFIGDIPSAP 613
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
++W ++S + + ALG F + P D
Sbjct: 614 SAMVWRALLSSCII---HKNVALGRFSAEKILEIEPQD 648
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 132/295 (44%), Gaps = 32/295 (10%)
Query: 215 ALQLFQ-EMVSLQL-----GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNS 266
ALQ + E+ SL + G+D + A L + D GG H H+++ G +
Sbjct: 37 ALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDL 96
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ L+++Y K G + ++F+ +P+ ++V + T++ ++Q+ ++ + A F++L
Sbjct: 97 FCANVLLNMYGKL-GPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF-EAAAALFRRLR 154
Query: 327 RVGYHPDDCSFVCVIS-ACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G+ + ++ A + + L +H+ K+ N V + L+ YS C +
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAF-VGSGLIDAYSLCSLV 213
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
DA +F+ + + V +M++ Y+++ A R + + + +++ +C
Sbjct: 214 SDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQ----------SCSLLAI--SC 261
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
A G + +K + EP ++D+ + G + DA E +P++
Sbjct: 262 ARQG------IHGCAIKTLNDTEPHVG--GALLDMYAKCGDIKDARLAFEMIPYD 308
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 317/544 (58%), Gaps = 36/544 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ LL Y + L++A++V EM E K+ VSW +M+ Y Q EAL +F EM+
Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A++LT+ L G Q H ++K + + +GS L+D+YAK +G +++
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK-AGQIKE 206
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++FE +P+ D+V +I+GY+Q ++AL F +L+ G P+ ++ +++A S
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLG-LDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ GKQ H ++ E+ + + N+L+ MYSKCGNL ARRLFD MPE +S N
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 405 SMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMK 462
+M+ GY++HG+G E L LF M E + P +T ++VLS C+H G F M+
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
+G +P EHY C++D+LGRAG++ +A I+ MP P + I
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 444
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+++EP NA YV+L+N+YA++G+W +V +R +M + V K+PG SWI+ ++
Sbjct: 445 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQT 504
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D +HP +E+ ++E+S KMKQAGYVPD KEK L+ HSEKL
Sbjct: 505 LHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKL 564
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+ FGL++T G PI V KNLRIC DCHN K S + RE+++RD RFH DG CSC
Sbjct: 565 ALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSC 624
Query: 674 GDYW 677
GDYW
Sbjct: 625 GDYW 628
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 174/344 (50%), Gaps = 25/344 (7%)
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
EM L + + ++L A L G + HAH+IK+ + +++ + L+ Y KC
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
+ D KV +E+P+ ++V W MIS YSQ +S +AL F ++ R P++ +F V
Sbjct: 102 C-LEDARKVLDEMPEKNVVSWTAMISRYSQT-GHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 341 ISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+++C S LGKQIH L +K S+ I V ++L+ MY+K G +++AR +F+ +PE +
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSH-IFVGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYF 458
VS ++IAGYAQ G+ EAL +F + + P +T+ S+L+A + + G Q +
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+++ F + + +ID+ + G L+ A RL + MP
Sbjct: 279 HVLRRELPFYAVLQ--NSLIDMYSKCGNLSYARRLFDNMP------------------ER 318
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
A+ + + Y+ G EV + RLMRD K + + V
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 37/244 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C+ L GK +H L +K +N
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVK-----------------------------WNYD 185
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +F + LL YA+ +I AR++F+ +P+ D+VS +I+ YA G E AL +F
Sbjct: 186 SH--IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + + T + L+TA S L L+ KQ HC + YA + NSL+ YS+
Sbjct: 244 RLHSEGMSPNYVTYASLLTALS-GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLAS 236
G L A+R+F M E + +SWN+M+V Y +H G E L+LF+ M ++ D TL +
Sbjct: 303 GNLSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 237 ILTA 240
+L+
Sbjct: 362 VLSG 365
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 44/192 (22%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L G L GK H L+ +PF A L N I +YSKCG LS
Sbjct: 256 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLS--------- 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
YAR+L FD +P+ +S+N ++ Y+ G L LF+
Sbjct: 307 --------------YARRL--------FDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCL--------AIYCGFDHYASVNNSLL 171
MR EKR D TL +++ S+ L+ G +HY + + L
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML- 403
Query: 172 TCYSRNGFLDEA 183
R G +DEA
Sbjct: 404 ---GRAGRIDEA 412
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/510 (39%), Positives = 300/510 (58%), Gaps = 33/510 (6%)
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
+WN+M+ Y + + AL+L+++M + D +T +L A L D+ G + H+
Sbjct: 107 TWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIA 166
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
I++GF + + L+ +YA C G K+FE + + +LV WN++I+GY+ ++
Sbjct: 167 IRNGFESLVFVQNTLVHMYAAC-GHAESAHKLFELMAERNLVTWNSVINGYALNGR-PNE 224
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
AL F+++ G PD + V ++SAC+ L +LG++ H +K+ + N + NAL+
Sbjct: 225 ALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGN-LHAGNALL 283
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
+Y+KCG++ A ++FD M E + VS S+I G A +G G EAL LF+ + + P+ I
Sbjct: 284 DLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEI 343
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TFV VL AC+H G V EG YF MK+ +G P+ EHY CM+DLLGRAG + A I+
Sbjct: 344 TFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQN 403
Query: 497 MPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
MP P ++ + A LQLEP ++ YV+L+N+YA+ +W +V
Sbjct: 404 MPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDV 463
Query: 540 ATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV 599
+RR M GV+K PG S +E++ ++H FV D SHP +EI+ L E+++ +K GYV
Sbjct: 464 HKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYV 523
Query: 600 P------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFI 647
P +KE L +HSEK+A+AF L++T+ G PI V+KNLR+C DCH AIK I
Sbjct: 524 PHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLI 583
Query: 648 SAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
S + REI VRD RFH FKDG CSC DYW
Sbjct: 584 SKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 252 QFHAHLIKSGFH-QNSHIGSGLI-DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
Q HA I+ G N +G LI L + CS M ++F +I P++ WNTMI GY+
Sbjct: 58 QIHAFSIRHGVPLTNPDMGKYLIFTLLSFCS-PMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNR 368
+ E AL +++++ PD ++ ++ A + L G+++H++ I+ S
Sbjct: 117 ESEN-PMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES-L 174
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V N LV MY+ CG+ E A +LF+ M E N V+ NS+I GYA +G EAL LF M
Sbjct: 175 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 234
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ P T VS+LSACA G +A G++ M + G + + ++DL + G +
Sbjct: 235 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV-GLDGNLHAGNALLDLYAKCGSIR 293
Query: 489 DAERLIEAM 497
A ++ + M
Sbjct: 294 QAHKVFDEM 302
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK D+ G+ +H++ ++N ++ N + +Y+ CG
Sbjct: 142 TYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACG------------ 189
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
HA SA +LF+ + + +LV++N++I+ YA G AL+LF+
Sbjct: 190 -HAE------------------SAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFR 230
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + + DGFT+ L++A + L L ++ H + G D N+LL Y++ G
Sbjct: 231 EMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCG 290
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A +VF EM E K VSW S++V + G EAL+LF+E+ L T +L
Sbjct: 291 SIRQAHKVFDEMEE-KSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVL 349
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + G + + + + H G ++DL + +G ++ + + +P Q
Sbjct: 350 YACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGC-MVDLLGR-AGLVKQAHEFIQNMPMQ 407
Query: 296 PDLVLWNTMISG 307
P+ V+W T++
Sbjct: 408 PNAVVWRTLLGA 419
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 353 KQIHALTIKIEIRSNRISVNNALV-AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
+QIHA +I+ + + L+ + S C + A ++F ++ N + N+MI GYA
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+ M AL L+ M + I P T+ +L A A V EG+K S+ GFE
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRN-GFESLV 175
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
+ ++ + G A +L E M N V + + N YA
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELMA------------------ERNLVTWNSVINGYA 217
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
+G+ E T+ R M RGV+ GF+ + + AE G+ + + H Y+
Sbjct: 218 LNGRPNEALTLFREMGLRGVEPD-GFTMVSLLSA----CAELGALALGRRAHVYM 267
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+ + N LL YA+ I A ++FD++ + +VS+ +LI A G + AL LFK++
Sbjct: 274 GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKEL 333
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS------------L 170
K T G++ A S HC + GFD++ + +
Sbjct: 334 ERKGLMPSEITFVGVLYACS---------HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCM 384
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+ R G + +A M + V W +++ A H
Sbjct: 385 VDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/656 (35%), Positives = 346/656 (52%), Gaps = 65/656 (9%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
ARQ+FD+I Q + S++ L+ Y + AL ++K+M + D +TLS ++ A +
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG---------- 191
L + + + A GF+ V SL+ +++ G L+EA+ VF MG
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120
Query: 192 -------------------EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
++KD VSWN+M+ AY + +A LF M +L D+Y
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T +SIL A S + L G H + GF ++ + + LI +Y +C G + + F
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRC-GSLESARRYFYS 239
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
I + +L WNTM++ Y+Q ++ D AL +K + G+ PD +F V+ +C++L
Sbjct: 240 IEKKELGAWNTMLAAYAQFDKGKD-ALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 298
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GK IH + + I + ALV MY+KCG+L DA++ FD + + VS ++MIA A
Sbjct: 299 GKFIHECSTSCGFEKDVI-LGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASA 357
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG EAL L M I +T SVL AC+H G++ EG YF + FG E +
Sbjct: 358 QHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDE 417
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL----------------KA-ANHFLQ 514
E+ IDLLGRAG L +AE ++ MPF +AL KA +
Sbjct: 418 ENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVA 477
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP N YV+L N+YAA+G+W++VA +RR MR +GV+++ G S IE + +++ F D
Sbjct: 478 LEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDT 537
Query: 575 SHPMIKEIHNYLEEMSRKMK-QAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
S+P EI LE + +MK + GYVPD KE+ L HSEK+A+ FGL++
Sbjct: 538 SNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLIT 597
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G + ++KNLR+C DCH K S I GR I VRD RFH F+ G CSCGDYW
Sbjct: 598 SPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C + L G+ LH + N+ I +Y++CG L +A F
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + ++N +LAAYA+ FD+ + AL L+K
Sbjct: 241 EKKELGAWNTMLAAYAQ----------FDK---------------------GKDALFLYK 269
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + F D FT S ++ AS L K +H + CGF+ + +L+ Y++ G
Sbjct: 270 NMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCG 329
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +AK+ F + KD VSW++M+ A QH EAL+L M + + T +S+L
Sbjct: 330 SLADAKKSFDGISN-KDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 388
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + L G+ + L + G ++ G IDL + +G +++ V +P +
Sbjct: 389 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGR-AGWLKEAEHVLHTMPFKV 447
Query: 297 DLVLWNTMISG 307
V T++ G
Sbjct: 448 SFVALVTLLGG 458
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 264/803 (32%), Positives = 383/803 (47%), Gaps = 135/803 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA------LYLKNLVPFSA-YLSNHFILLYSKCGCLSAA 53
++ ++LK C DL GK LHA L L + A +L N + +Y KCG A
Sbjct: 16 SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASA----------------------------- 84
AF+ H N+FS+ +L AY A A
Sbjct: 76 QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135
Query: 85 ----------RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK--DMRE-------- 124
RQ+ D++ DL N L+S Y CG + A LF +M+
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195
Query: 125 -------KRFDTDGFTLSGLITASSNNLCLIKQL-----------------HCLAIYCGF 160
+R +T G S + + L+ L H + G
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV--SWNSMVVAYGQHREGLEALQL 218
D A V +LL+ ++R G +D+A+ +F ++ + +V WN+M+ AY EAL L
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
+ + + T S L A +SL+D G H + +SGF + + + L+ +Y +
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGR 372
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV----GYHPDD 334
C G + D K+F E+ + DL WN+ I+ ++ Y ++ C K L+++ G P
Sbjct: 373 C-GSLLDSAKLFSEMAEKDLASWNSAIAAHA----YHGRSDECIKLLDQMRGEGGLEPSS 427
Query: 335 CSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFD 393
+ V +SAC L+ PS K++H ++ + S V N LV MY K G+++ AR +FD
Sbjct: 428 VTLVTAMSACGGLADPSSSKRVHERARELGLESE-TCVANGLVDMYGKAGDVDTARYIFD 486
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
R N + N+M Y Q G+ L L M P ++TFVS+LS C H+G + E
Sbjct: 487 RALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEE 546
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF-----NPGSIALKA 508
+ F M+ FG +P +HYSC+IDLL RAG+L AE I + +P +AL
Sbjct: 547 ARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLG 606
Query: 509 ANHFL------------------QLEPSN----AVPYVMLANIYAASGKWEEVATIRRLM 546
A L ++EP + + +V LANI AASG W+E +IR+ M
Sbjct: 607 ACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAM 666
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV------- 599
++G++K+PG S I VK ++H FVA D HP +EI+ L + R M GYV
Sbjct: 667 AEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVT 726
Query: 600 -----PDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
DK L HSEKLAVAFG+LST G + ++KNLR CGDCH AIK ISAI GRE
Sbjct: 727 HNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGRE 786
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD+ RFH F++G CSCGDYW
Sbjct: 787 IVVRDSNRFHHFRNGSCSCGDYW 809
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 333 DDC-SFVCVISACSNLSP-SLGKQIHA------LTIKIEIRSNRISVNNALVAMYSKCGN 384
D C S+ ++ C L + GK++HA L + S + N LV MY KCG
Sbjct: 12 DACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGR 71
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
++A+R FD + N S S++ Y G+ +AL F M++ + P + F++ L+
Sbjct: 72 TDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNV 131
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
C ++ +G ++D + + E + ++ + G+ G+L A++L +
Sbjct: 132 CGILKRLEDGAGIHRQIQDKL-LDSDLEIGNALVSMYGKCGRLDLAKQLFDC-------- 182
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
LE N + + +L +++A +G+ E + R M G++
Sbjct: 183 ----------LEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIK 220
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/603 (38%), Positives = 328/603 (54%), Gaps = 72/603 (11%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N + L +Q H + G A + ++ Y+ +G LD A VF + + + +NS+
Sbjct: 91 NFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRI-DNPSSLLYNSI 149
Query: 203 VVAYGQH---REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
+ AY +H L+ + M L L D +TL +L + L + G H ++
Sbjct: 150 IRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLR 209
Query: 260 SGFHQNSHIGSGLIDLYAKCS--GDMR---DCMKV------------------------- 289
G + ++G+ LID+Y KC GD R D M V
Sbjct: 210 VGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDL 269
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG--YHPDDCSFVCVISACSNL 347
FE + ++V W MISGY+Q +++QALG F ++ + G P+ + V V+ AC+
Sbjct: 270 FERMEHRNIVSWTAMISGYTQNG-FAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ- 327
Query: 348 SPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH--NTVSL 403
S +L G++IH I + N SV AL MY+KC +L +AR FD + ++ N ++
Sbjct: 328 SAALERGRRIHDFANGIGLHLNS-SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAW 386
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI YA HG G+EA+ +FE ML + P +TF+ +LS C+H+G + G +F+ M
Sbjct: 387 NTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGT 446
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIAL 506
+ EP EHY+C++DLLGRAG+L +A+ LI MP G IA
Sbjct: 447 IHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAE 506
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA LEP N+ YV+L+N+YA +G WEEV +R L++ +G++K PG SWIE+ +
Sbjct: 507 LAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKS 566
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H+F+ D SHP KEI+ +LE + K+K AGY+PD KE L HSEKLA
Sbjct: 567 HLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLA 626
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGLL+T G + V KNLRICGDCH A KFIS I REI VRD RFHCFKDG CSCG
Sbjct: 627 IAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCG 686
Query: 675 DYW 677
DYW
Sbjct: 687 DYW 689
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 52/444 (11%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCG---DTESALSLFK 120
N F ++A YA + SA +FD+I P + YN++I AY G L +
Sbjct: 111 NAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYA 170
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M D FTL ++ + ++ +C+ + +H + G + V SL+ Y + G
Sbjct: 171 RMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCG 230
Query: 179 FLDEAKRVFYEM------------------GEI------------KDEVSWNSMVVAYGQ 208
+ +A+++F +M GEI ++ VSW +M+ Y Q
Sbjct: 231 VIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQ 290
Query: 209 HREGLEALQLFQEMVSLQLGLDM----YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+ +AL LF EM LQ G +M T+ S+L A L G + H G H
Sbjct: 291 NGFAEQALGLFDEM--LQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHL 348
Query: 265 NSHIGSGLIDLYAKCSG--DMRDCMKVFEEIPQ--PDLVLWNTMISGYSQKEEYSDQALG 320
NS + + L +YAKC + R C F+ I Q +L+ WNTMI+ Y+ +A+
Sbjct: 349 NSSVQTALAGMYAKCYSLVEARCC---FDMIAQNGKNLIAWNTMITAYA-SHGCGVEAVS 404
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS--NRISVNNALVAM 378
F+ + R G PD +F+ ++S CS+ S + ++ I S R+ +V +
Sbjct: 405 IFENMLRAGVQPDAVTFMGLLSGCSH-SGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDL 463
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
+ G L +A+ L +MP S+ + + +E L L P + +
Sbjct: 464 LGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNY 523
Query: 439 VSVLSACAHTGKVAEGQKYFSMMK 462
V + + A G E +K +++K
Sbjct: 524 VLLSNLYAEAGMWEEVKKLRALLK 547
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 153/325 (47%), Gaps = 30/325 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK+C + G+ +H L+ + Y+ I +Y KCG + A F++
Sbjct: 183 TLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM 242
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N L+A Y ++ I A LF+++ ++VS+ +IS Y G E AL LF
Sbjct: 243 IVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFD 302
Query: 121 DMRE--KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M + + T+ ++ A + + L +++H A G +SV +L Y++
Sbjct: 303 EMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAK 362
Query: 177 NGFLDEAKRVFYEMGEI-KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
L EA+ F + + K+ ++WN+M+ AY H G+EA+ +F+ M+ + D T
Sbjct: 363 CYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFM 422
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS------------GLIDLYAKCSGDM 283
+L+ + H+ LI +G + + +G+ ++DL + +G +
Sbjct: 423 GLLSGCS-----------HSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGR-AGRL 470
Query: 284 RDCMKVFEEIP-QPDLVLWNTMISG 307
+ ++ ++P Q +W +++
Sbjct: 471 VEAKELISQMPMQAGPSVWGALLAA 495
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 235/676 (34%), Positives = 346/676 (51%), Gaps = 75/676 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDT 129
+L + R+ R AR +FD+ P + IS A G + F +M E
Sbjct: 51 VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110
Query: 130 DGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
+ F L+ ++ A ++ K++H + G + N++L Y++ G + A+RVF
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE-------------------------- 221
M E +D VSWN + A Q + L ++QLF E
Sbjct: 171 GAMAE-RDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229
Query: 222 -----MVSLQLGLDMYTLAS--ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
M + + YT ++ +L L DL G Q H ++ + ++ + S L+D
Sbjct: 230 SHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDL--GRQLHGRVLIAALEGDAFVRSSLMD 287
Query: 275 LYAKCSGDMRDCMKVFEE---IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
+Y KC G + VF+ + + W+TM++GY Q ++AL F+++ R G
Sbjct: 288 MYCKC-GLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGR-EEEALDLFRRMLREGVA 345
Query: 332 PDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D + V +AC+N+ G+Q+H K+ + + + +A+V MY+KCGNLEDAR
Sbjct: 346 ADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLD-APLASAIVDMYAKCGNLEDARS 404
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FDR N SM+ YA HG G A+ LFE M + P IT V VLSAC+H G
Sbjct: 405 IFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGL 464
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK--- 507
V+EG+ YF M++ +G P EHY+C++DL GR+G L A+ IE N +I K
Sbjct: 465 VSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLL 524
Query: 508 --------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A+ +QLE +A YVML+NIYA + KW + +R M++R V+K
Sbjct: 525 SACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRK 584
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------D 601
+PG SWI +K +H FVA D SHP EI+ YLE++ ++K+ GY
Sbjct: 585 QPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQ 644
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
+E L HSEKLA+AFG++ST G P+ + KNLR+C DCH AIK+IS GREI VRD Y
Sbjct: 645 RETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLY 704
Query: 662 RFHCFKDGRCSCGDYW 677
RFH FKD CSC D+W
Sbjct: 705 RFHHFKDASCSCEDFW 720
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 39/362 (10%)
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QL 227
S+L + R +A+ VF E V W + + + ++ F EM++ +
Sbjct: 50 SVLRFWVRRRRFHDARGVFDERPTRTAPV-WTLTISGCARRGRYADGMRAFAEMLAEGEA 108
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-------- 279
+ + LA+++ + D+ G + H ++++G H + + + ++D+YAKC
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 280 ----------------------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
SGD+ M++F+E P D WNT+ISG + +D
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAAD- 227
Query: 318 ALGCFKKLNRVGYHPDDCSF-VCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALV 376
AL +++ + G + ++ + A L P LG+Q+H + + + V ++L+
Sbjct: 228 ALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAF-VRSSLM 286
Query: 377 AMYSKCGNLEDARRLFDR---MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
MY KCG LE A +FD + + ++M+AGY Q+G EAL LF ML +
Sbjct: 287 DMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAA 346
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
T SV +ACA+ G V +G++ ++ ++ ++ + S ++D+ + G L DA +
Sbjct: 347 DRFTLTSVAAACANVGMVEQGRQVHGCVEKLW-YKLDAPLASAIVDMYAKCGNLEDARSI 405
Query: 494 IE 495
+
Sbjct: 406 FD 407
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 36/230 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V C + G+ +H K A L++ + +Y+KCG L A F++
Sbjct: 350 TLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA 409
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ + +L +YA + A +LF+++ P+ ++ ++SA + G
Sbjct: 410 CTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGE 469
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M+E+ I +HY N ++ Y R
Sbjct: 470 LYFKQMQEE----------------------------YGIVPSIEHY----NCIVDLYGR 497
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+G LD+AK E + + W +++ A H+ A +++V L+
Sbjct: 498 SGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLE 547
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/478 (41%), Positives = 291/478 (60%), Gaps = 39/478 (8%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+T + ILTA ++ + HA ++K+ + ++S +G+ L+D Y K G + + KVF
Sbjct: 2 FTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKL-GKVEEAAKVFS 56
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSP 349
I D+V W+ M++GY+Q E ++ A+ F +L + G P++ +F +++ C +N S
Sbjct: 57 GIDDKDIVAWSAMLAGYAQTGE-TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 115
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GKQ H IK + S+ + V++AL+ MY+K GN+E A +F R E + VS NSMI+G
Sbjct: 116 GQGKQFHGFAIKSRLDSS-LCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 174
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YAQHG M+AL +F+ M + + +TF+ V +AC H G V EG+KYF +M P
Sbjct: 175 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 234
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHF 512
EH SCM+DL RAG+L A ++IE MP GS + AA
Sbjct: 235 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 294
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+ ++P ++ YV+L+N+YA SG W+E A +R+LM +R V+K+PG+SWIEVK + + F+A
Sbjct: 295 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 354
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D SHP+ +I+ LE++S ++K GY PD KE L HSE+LA+AFGL+
Sbjct: 355 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLI 414
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF-KDGRCSCGDYW 677
+T G P+L++KNLR+CGDCH IK I+ I REI VRD+ RFH F DG CSCGD+W
Sbjct: 415 ATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 131/244 (53%), Gaps = 7/244 (2%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
LL AY + ++ A ++F I D+V+++ +++ YA G+TE+A+ +F ++ +
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 129 TDGFTLSGLI---TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+ FT S ++ A++ ++ KQ H AI D V+++LLT Y++ G ++ A+
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
VF E KD VSWNSM+ Y QH + ++AL +F+EM ++ +D T + A T
Sbjct: 156 VFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 214
Query: 246 DLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNT 303
+ G ++ +++ S ++DLY++ +G + MKV E +P P +W T
Sbjct: 215 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR-AGQLEKAMKVIENMPNPAGSTIWRT 273
Query: 304 MISG 307
+++
Sbjct: 274 ILAA 277
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 168/339 (49%), Gaps = 17/339 (5%)
Query: 132 FTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
FT S ++TA L +I ++H + ++ ++V +LL Y + G ++EA +VF
Sbjct: 2 FTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
+ + KD V+W++M+ Y Q E A+++F E+ + + +T +SIL + +G
Sbjct: 58 IDD-KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116
Query: 250 -GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G QFH IKS + + S L+ +YAK G++ +VF+ + DLV WN+MISGY
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAK-KGNIESAEEVFKRQREKDLVSWNSMISGY 175
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNR 368
+Q + + +AL FK++ + D +F+ V +AC++ + + I +R +
Sbjct: 176 AQHGQ-AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY---FDIMVRDCK 231
Query: 369 ISV----NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
I+ N+ +V +YS+ G LE A ++ + MP ++ I + E RL
Sbjct: 232 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 291
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+ P + +V + + A +G E K +M +
Sbjct: 292 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 330
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+ LL YA++ I SA ++F + + DLVS+N++IS YA G AL +FK+M++++
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 197
Query: 129 TDGFTLSGLITASSNNLCL---IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
DG T G+ A ++ + K + C N+ ++ YSR G L++A +
Sbjct: 198 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 257
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHRE 211
V M W +++ A H++
Sbjct: 258 VIENMPNPAGSTIWRTILAACRVHKK 283
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 335/560 (59%), Gaps = 39/560 (6%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLH + G V+++L+ YS+ + +VF E + K +W+S++ A+ Q+
Sbjct: 46 QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPK-KSSTTWSSVISAFAQN 104
Query: 210 REGLEALQLFQEMVSLQLGLD--MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
L ALQ F+ M++ + D +Y A+ F D+ G H +K+G++ +
Sbjct: 105 EAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDV--GKSVHCLAVKTGYYCDVF 162
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+GS L+D+YAKC G++ D +F+E+P+ ++V W+ MI GY+Q ++ +AL FK+
Sbjct: 163 VGSSLVDMYAKC-GEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD-GVEALTLFKQALI 220
Query: 328 VGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+D +F VI CS+ + LGK IH L +K+ S+ V +AL+++YSKCG +E
Sbjct: 221 EDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSF-VGSALISLYSKCGVIE 279
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A ++FD +P N NSM+ AQH LFE M + P I+F+SVL AC+
Sbjct: 280 GAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACS 339
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
H G V +G++YFS+M+D +G EPE EHY+ ++DLLGRAGKL +A +I+ MP P
Sbjct: 340 HAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A A+ L+++ S++ +V+L+N YAA+G++EE A +R+++RDR
Sbjct: 399 GALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
GV+K+ G SW+E ++H F A D SH EI+ LEE+ +M++AGYV D
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
K + + +HSE+LA+AFGL++ G PI VMKNLR+CGDCH AIKF+S GR + V
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F+DG+CSCGDYW
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 211/422 (50%), Gaps = 32/422 (7%)
Query: 62 HANVFSFNV---------LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
HA++ F + L+ Y++ + Q+FD+ P+ +++++ISA+A
Sbjct: 48 HAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAP 107
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYAS 165
AL F +R DG I S+ C + K +HCLA+ G+
Sbjct: 108 LLALQFF-----RRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V +SL+ Y++ G + +A+ +F EM E ++ VSW+ M+ Y Q +G+EAL LF++ +
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPE-RNVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ ++ +T +S++ +S L G H +K F +S +GS LI LY+KC G +
Sbjct: 222 DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC-GVIEG 280
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+VF+EIP +L LWN+M+ +Q ++ + G F+++ VG P+ SF+ V+ ACS
Sbjct: 281 AYQVFDEIPTRNLGLWNSMLIACAQ-HAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACS 339
Query: 346 NLS-PSLGKQIHALT--IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+ G++ +L IE + + +LV + + G L++A + +MP T S
Sbjct: 340 HAGLVEKGREYFSLMRDYGIEPETEHYA---SLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 403 L-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ +++ G H A + + +LE + + + V + +A A G+ E + M+
Sbjct: 397 VWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGL-HVLLSNAYAAAGRYEEAARMRKML 455
Query: 462 KD 463
+D
Sbjct: 456 RD 457
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 5/266 (1%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ ++L +FT L GLQ HAH++K G + LI+LY+K + ++VF+E
Sbjct: 28 ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFS-LQVFDET 86
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LG 352
P+ W+++IS ++Q E AL F+++ G PDD + AC L S +G
Sbjct: 87 PKKSSTTWSSVISAFAQNEA-PLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVG 145
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K +H L +K + + V ++LV MY+KCG + DAR LFD MPE N VS + MI GYAQ
Sbjct: 146 KSVHCLAVKTGYYCD-VFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G+EAL LF+ L ++ + TF SV+ C+ + + G+ + M F+
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKM-SFDSSSF 263
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMP 498
S +I L + G + A ++ + +P
Sbjct: 264 VGSALISLYSKCGVIEGAYQVFDEIP 289
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 7 KTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
K C R GKS+H L +K ++ + + +Y+KCG + A H F++ NV
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV- 192
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
VS++ +I YA D AL+LFK +
Sbjct: 193 ------------------------------VSWSGMIYGYAQLDDGVEALTLFKQALIED 222
Query: 127 FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
D + FT S +I +SS L L K +H L + FD + V ++L++ YS+ G ++ A
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
+VF E+ ++ WNSM++A QH LF+EM ++ + + + S+L A +
Sbjct: 283 QVFDEI-PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHA 341
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNT 303
+ G ++ + + G + + L+DL + +G +++ + V +++P +P +W
Sbjct: 342 GLVEKGREYFSLMRDYGIEPETEHYASLVDLLGR-AGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 304 MISG 307
+++G
Sbjct: 401 LLTG 404
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V++ C L GK +H L LK S+++ + I LYSKCG + A+ F++
Sbjct: 229 TFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N +L A A+ LF+++ +P+ +S+ +++ A + G E
Sbjct: 289 PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGR 348
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ + + +HYA SL+ R
Sbjct: 349 EYFSLMRDYGIEPET-----------------------------EHYA----SLVDLLGR 375
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
G L EA V +M E W +++ H++
Sbjct: 376 AGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 410
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 314/573 (54%), Gaps = 35/573 (6%)
Query: 138 ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY--EMGEIKD 195
I + N L + QLH I GF + V + S + A + + E + D
Sbjct: 13 ILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYD 72
Query: 196 EVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+++++ AY + + A+ + M+ + + Y +L A L DL G H
Sbjct: 73 AFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVH 132
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
L+K GF + + + ++ +Y CSG M K+F+E+P+ D V W MI GY++ +
Sbjct: 133 GSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQ- 191
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
S A+G F+K+ G PDD + V V+SAC++L LGK I + I+ E + ++N
Sbjct: 192 SAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESY-IEKERVLKTVELSN 250
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV M++KCG+++ A LF M + VS S+I G A HG G+EA+ LFE M + + P
Sbjct: 251 ALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVP 310
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+I F+ +LSAC+H+G V G++YFS M FG P+ EHY CM+DLL RAG +T+A
Sbjct: 311 EDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEF 370
Query: 494 IEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKW 536
+E MP P I + + ++ EP + YV+L+NIY W
Sbjct: 371 VERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDW 430
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
E+ + IR M +G+QK PG + IE+ ++H F+ D SH EI + EM R+MK+A
Sbjct: 431 EKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRA 490
Query: 597 GYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY P DKE L HSEKLA+AF LL+T G PI + KNLR+CGDCH+A
Sbjct: 491 GYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSAS 550
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KFIS I REI +RD RFH F+DG+CSCGD+W
Sbjct: 551 KFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 144/311 (46%), Gaps = 38/311 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VLK C G RDL GK++H +K ++ N + +Y C C A
Sbjct: 112 FPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMY--CCCSGGMEFA----- 164
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
R+LFD++P+ D V++ +I YA G + A+ LF+
Sbjct: 165 -----------------------RKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRK 201
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D T+ +++A ++ L L K + ++N+L+ +++ G
Sbjct: 202 MQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGD 261
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D+A +F M + + VSW S++V H GLEA+ LF+EM + + + +L+
Sbjct: 262 VDKALGLFRNMSK-RTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLS 320
Query: 240 AFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + + G Q+ + + + + H G ++DL ++ +G + + ++ E +P +P
Sbjct: 321 ACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGC-MVDLLSR-AGLVTEALEFVERMPIEP 378
Query: 297 DLVLWNTMISG 307
+ ++W T+IS
Sbjct: 379 NPIIWRTLISA 389
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 77/215 (35%), Gaps = 36/215 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK + + K V + LSN + +++KCG + A F
Sbjct: 213 TMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNM 272
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ S+ ++ A R A LF+++ P+ +++ L+SA + G E
Sbjct: 273 SKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGR 332
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F +M + I +HY + + L SR
Sbjct: 333 QYFSEMTRQ----------------------------FGIVPKIEHYGCMVDLL----SR 360
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
G + EA M + + W +++ A H E
Sbjct: 361 AGLVTEALEFVERMPIEPNPIIWRTLISACRVHGE 395
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/573 (37%), Positives = 329/573 (57%), Gaps = 33/573 (5%)
Query: 57 FNQTQHA---------NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
F Q HA +VF + LL Y + + AR++FD++P+ + V++ T+IS YA
Sbjct: 129 FGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYA 188
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYAS 165
A +F+ MR + D + F + +++A + + KQ+HCLA+ G + S
Sbjct: 189 IQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLS 248
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ N+L+T Y++ G LD++ +VF EM K+ ++W++M+ Y Q + +AL+LF M
Sbjct: 249 ILNALVTMYAKCGSLDDSLQVF-EMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFA 307
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +TL +L A + + G Q H +L+K GF +I + L+D+YAK SG D
Sbjct: 308 GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAK-SGVTED 366
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
K F + QPDLVLW +MI+GY Q E D AL + ++ G P++ + V+ ACS
Sbjct: 367 ARKGFNYLQQPDLVLWTSMIAGYVQNGENED-ALSLYCRMQMEGILPNELTMASVLKACS 425
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
NL+ G+QIHA TIK + +++ +AL MY+KCGNLE+ +F RMPE + +S N
Sbjct: 426 NLAAFDQGRQIHARTIKYGL-GLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWN 484
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI+G +Q+G G EAL LFE M + + P ++TFV+VLSAC+H G V G YF MM D
Sbjct: 485 AMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDE 544
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALK 507
FG P+ EHY+CM+D+L RAGKL +A+ IE+ + G +
Sbjct: 545 FGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAY 604
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
A ++L + YV+L+ IY A G+ E+V +R +M+ RGV K+PG SWIE+K +H
Sbjct: 605 AGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVH 664
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
VFV D HP I EI + +S++MK GY P
Sbjct: 665 VFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQP 697
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 237/441 (53%), Gaps = 14/441 (3%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA--LSLFKDM 122
++ N L+ YA+ + A+ +FD+I D++S+N LI+ Y+ G T S+ + LF+ M
Sbjct: 43 IYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRM 102
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAI--YCGFDHYASVNNSLLTCYSRNG 178
R + T SG+ TA+SN ++ +Q H +AI C +D + V +SLL Y + G
Sbjct: 103 RADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVF--VGSSLLNMYCKAG 160
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L EA+ VF M E ++EV+W +M+ Y R EA ++F+ M + ++ + S+L
Sbjct: 161 LLFEAREVFDRMPE-RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVL 219
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A E + G Q H +K+G I + L+ +YAKC G + D ++VFE +
Sbjct: 220 SALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKC-GSLDDSLQVFEMSNDKNS 278
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
+ W+ MI+GY+Q + S +AL F +++ G +P + + V V++ACS+ + GKQ+H
Sbjct: 279 ITWSAMITGYAQSGD-SHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHN 337
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K+ S ++ + ALV MY+K G EDAR+ F+ + + + V SMIAGY Q+G
Sbjct: 338 YLLKLGFES-QLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENE 396
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL L+ M I P +T SVL AC++ +G++ + +G E S +
Sbjct: 397 DALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIK-YGLGLEVTIGSAL 455
Query: 478 IDLLGRAGKLTDAERLIEAMP 498
+ + G L + + MP
Sbjct: 456 STMYAKCGNLEEGNIVFRRMP 476
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 170/350 (48%), Gaps = 40/350 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL + +GK +H L +K L+ F + L N + +Y+KCG L + F +
Sbjct: 215 FTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSIL-NALVTMYAKCGSLDDSLQVFEMS 273
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N + ++ +I+ YA GD+ AL LF
Sbjct: 274 NDKNSIT-------------------------------WSAMITGYAQSGDSHKALKLFS 302
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + FTL G++ A S+ C + KQ+H + GF+ + +L+ Y+++
Sbjct: 303 RMHFAGINPSEFTLVGVLNACSDA-CAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKS 361
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++A++ F + + D V W SM+ Y Q+ E +AL L+ M + + T+AS+
Sbjct: 362 GVTEDARKGFNYLQQ-PDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASV 420
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A ++L G Q HA IK G IGS L +YAKC G++ + VF +P+ D
Sbjct: 421 LKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKC-GNLEEGNIVFRRMPERD 479
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
++ WN MISG SQ Y +AL F+++ + PDD +FV V+SACS++
Sbjct: 480 IISWNAMISGLSQN-GYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHM 528
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 49/333 (14%)
Query: 331 HPDD-CSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
HP + SF ++ S G+ +HA IK+ S+ I + N+L+ Y+KC +L A+
Sbjct: 4 HPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAK 63
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEA--LRLFEWMLETNIPPTNITFVSVLSACAH 447
+FDR+ + +S N +I GY+Q G + + LF+ M NI P TF + +A ++
Sbjct: 64 LVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASN 123
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
+ GQ+ ++ M F S ++++ +AG L +A + + MP
Sbjct: 124 LSSIFFGQQAHAVAIKMACFYDVFVG-SSLLNMYCKAGLLFEAREVFDRMP--------- 173
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV----- 562
N V + + + YA E + LMR R + F++ V
Sbjct: 174 ---------ERNEVTWATMISGYAIQRLAGEAFEVFELMR-REEEDVNEFAFTSVLSALA 223
Query: 563 -------KKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAV 615
KQ+H + G + I N L M K G + D + ++K ++
Sbjct: 224 VPEFVDSGKQIHCLAVKTGLLVFLS-ILNALVTMYAK---CGSLDDSLQVFEMSNDKNSI 279
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+ + T Y + GD H A+K S
Sbjct: 280 TWSAMITGYAQS----------GDSHKALKLFS 302
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 42/192 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G+ +HA +K + + + +Y+KCG L
Sbjct: 416 TMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNL---------- 465
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N+ +F ++P+ D++S+N +IS + G + AL LF+
Sbjct: 466 EEGNI---------------------VFRRMPERDIISWNAMISGLSQNGYGKEALELFE 504
Query: 121 DMREKRFDTDGFTLSGLITASSN-NLCLIKQLHCLAIYCGF------DHYASVNNSLLTC 173
+MR++ D T +++A S+ L L+ ++ F +HYA + + L
Sbjct: 505 EMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVL--- 561
Query: 174 YSRNGFLDEAKR 185
SR G L EAK
Sbjct: 562 -SRAGKLYEAKE 572
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/713 (33%), Positives = 366/713 (51%), Gaps = 71/713 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R++ GK +H L +K + ++N + +YSKCGC++ A F
Sbjct: 291 TLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLN 350
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT++ ++ GD L +
Sbjct: 351 NNKNV-------------------------------VSWNTMVGGFSAAGDIHKTFDLLR 379
Query: 121 DMREKRFD--TDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYAS-VNNSLLTCYS 175
M D D T+ + L +K+LHC ++ F H V N+ + Y+
Sbjct: 380 QMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYA 439
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L A RVF + K SWN+++ Y Q + +L + +M S L D++T+
Sbjct: 440 KCGSLSYAHRVFCSI-RSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVC 498
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L+A + ++ L G + H +I++ ++S + L+ LY C G++ +F+ +
Sbjct: 499 SLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHC-GELSTAHVLFDAMED 557
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
LV WNTM++GY Q + ++AL F+++ G P + S + V ACS L S LG++
Sbjct: 558 KTLVSWNTMVNGYLQNG-FPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGRE 616
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
H +K + N + +++ MY+K G++ ++ ++F+ + E + S N+M+ GY HG
Sbjct: 617 AHGYALKCLLEDNAF-IACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHG 675
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
EA++LFE M T P +TF+ VL+AC H+G V EG Y MK +FG P +HY
Sbjct: 676 RAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHY 735
Query: 475 SCMIDLLGRAGKLTDAERL-IEAMPFNPG-----------------SIALKAANHFLQLE 516
+C+ID+L RAGKL +A ++ E M PG + K A E
Sbjct: 736 ACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSE 795
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P YV+L+N+YA SGKW+EV +R+ M++ ++K G SWIE+ ++ FVA + S
Sbjct: 796 PEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSL 855
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
+EI + + R++ + GY PD K ++L HSEKLA+ +GL+ TS
Sbjct: 856 DGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSE 915
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V KNLRIC DCHNA K IS + REI VRD RFH FK+G CSCGDYW
Sbjct: 916 GTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 223/478 (46%), Gaps = 50/478 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C G ++ G ++H L +K + ++SN + Y G
Sbjct: 186 TFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNG------------ 233
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ A ++F +P+ +LVS+N++I ++D G +E L
Sbjct: 234 -------------------SVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLG 274
Query: 121 DMREK----RFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
M EK F D TL+ + + A + + K +H LA+ D VNN+L+ Y
Sbjct: 275 QMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMY 334
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQLGLDMY 232
S+ G +++A+ V +++ K+ VSWN+MV + + + L ++M++ L D
Sbjct: 335 SKCGCINDAQ-VIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEV 393
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ + + L + H + +K F H N + + + YAKC G + +VF
Sbjct: 394 TILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKC-GSLSYAHRVFC 452
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
I + WN +I GYSQ + +L + ++ G PD + ++SACS + S
Sbjct: 453 SIRSKTVNSWNALIGGYSQSSD-PRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLK 511
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LGK++H L I+ + + V +L+++Y CG L A LFD M + VS N+M+ GY
Sbjct: 512 LGKEVHGLIIRNRLERDSF-VYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGY 570
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKD 463
Q+G AL LF M+ + P I+ +SV AC+ G+ A G +++D
Sbjct: 571 LQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLED 628
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 171/380 (45%), Gaps = 47/380 (12%)
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+D+ G + H + +S N + + +I +Y+ C G D VF+ + + +L WN
Sbjct: 95 KDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMC-GSPDDSRSVFDALRKKNLFQWNA 153
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
+IS YS+ E Y + K + G PD+ +F CV+ AC+ +S +G +H L +K
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ + + V+NALV+ Y G++ DA R+F MPE N VS NSMI ++ +G+ E L
Sbjct: 214 RLVED-VFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLL 272
Query: 423 FEWMLETN----IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
M+E + P T +VL CA ++ G+ + + + E + ++
Sbjct: 273 LGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKL-SLDKEVVVNNALM 331
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
D+ + G + DA+ + K N+ N V + + ++A+G +
Sbjct: 332 DMYSKCGCINDAQ------------VIFKLNNN------KNVVSWNTMVGGFSAAGDIHK 373
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA-EDGSHPMIKEIHNYLEEMSRKMKQAG 597
+ R M G + EV V V E+ P +KE+H Y +KQ
Sbjct: 374 TFDLLRQMLAGGGDLRAD----EVTILNAVPVCFEESVLPNLKELHCY------SLKQ-- 421
Query: 598 YVPDKEKRLVHHSEKLAVAF 617
VH++E +A AF
Sbjct: 422 -------EFVHNNELVANAF 434
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/440 (43%), Positives = 284/440 (64%), Gaps = 33/440 (7%)
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + L+D+YAK G VFE++ D++ W ++++G Y ++AL F ++
Sbjct: 4 VNNALVDMYAK-XGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY-EEALRLFCEMRI 61
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+G HPD V+SAC+ L+ GKQ+HA +K + S+ +SV+N+LV+MY+KCG +E
Sbjct: 62 MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSS-LSVDNSLVSMYAKCGCIE 120
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
DA ++FD M + ++ ++I GYAQ+G G E+L + M+ + + P ITF+ +L AC+
Sbjct: 121 DANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACS 180
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP----- 501
H G V G+ YF M++++G +P EHY+CMIDLLGR+GKL +A+ L+ M P
Sbjct: 181 HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVW 240
Query: 502 ----------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
G++ L +AAN+ +LEP NAVPYV+L+N+Y+A+GKWEE A RRLM+ R
Sbjct: 241 KALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLR 300
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
GV K+PG SWIE+ ++H F++ED SHP EI++ ++E+ +K+AGYVPD
Sbjct: 301 GVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDM 360
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KE L +HSEKLAVAFGLL+ G PI + KNLRICGDCH A+K++S + R + +
Sbjct: 361 DEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVIL 420
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD+ FH F++G CSC DYW
Sbjct: 421 RDSNCFHHFREGACSCSDYW 440
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L GK +HA +LK+ + S + N + +Y+KCGC+ A+ F+ + +
Sbjct: 74 VLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQD 133
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFK 120
V ++ L+ YA+ R + ++ + +PD +++ L+ A + G E S F+
Sbjct: 134 VITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQ 193
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M E I G +HYA + + L R+G L
Sbjct: 194 SMEE----------------------------VYGIKPGPEHYACMIDLL----GRSGKL 221
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
EAK + +M D W +++ A H
Sbjct: 222 MEAKELLNQMAVQPDATVWKALLAACRVH 250
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 362/653 (55%), Gaps = 41/653 (6%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H ++F L+ Y R R AR +F ++P D+V++N +++ YA+ G A++ D
Sbjct: 132 HTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLD 191
Query: 122 MREKR-FDTDGFTLSGLITASSNNLCLIK----QLHCL-AIYCGFDHYASVNNSLLTCYS 175
M++ + TL L+ + + L + +CL A + + +LL Y+
Sbjct: 192 MQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYA 251
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTL 234
+ L A RVF+ M ++++V+W++++ + EA LF++M+ L L ++
Sbjct: 252 KCKQLVYACRVFHGM-PVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSV 310
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
AS L SL DL G Q HA + KSG H + + L+ +YAK +G + + F+EI
Sbjct: 311 ASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAK-AGLINEATMFFDEIA 369
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
D + + ++SG Q + +++A FKK+ PD + V +I ACS+L+ GK
Sbjct: 370 VKDTISYGALLSGCVQNGK-AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
H I I + S+ N+L+ MY+KCG ++ +R++FD+MP + VS N+MIAGY H
Sbjct: 429 CSHGSVI-IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIH 487
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EA LF M P ++TF+ +++AC+H+G V EG+ +F M +G P EH
Sbjct: 488 GLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEH 547
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y CM+DLL R G L +A + I++MP + + + +L
Sbjct: 548 YICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLG 607
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P +V+L+NI++A+G+++E A +R + + +G +K PG+SWIE+ +H FV D SH
Sbjct: 608 PEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSH 667
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSEKLAVAFGLLSTSY 624
P ++I++ L+ + +K+ GY D K L++HSEKLA+AFG+LS +
Sbjct: 668 PCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNE 727
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I V KNLR+CGDCH AIK+++ + R I VRDT RFH FK+G+CSCG++W
Sbjct: 728 DKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 217/428 (50%), Gaps = 15/428 (3%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
++A ARQ+FD+IP PD +YN LI AY+ G +A+ L++ M R + +T ++
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108
Query: 140 ASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A S +L + +H A G V+ +L+ Y R A+ VF +M ++D V
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM-PMRDVV 167
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
+WN+M+ Y H A+ +M L + TL S+L L G HA+
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 257 LIKSGFHQNSH---IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
+++ QN IG+ L+D+YAKC + C +VF +P + V W+ +I G+ +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYAC-RVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 314 YSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+ +A FK + G S + C++L+ +G Q+HAL K I ++ ++
Sbjct: 287 MT-EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD-LTA 344
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+N+L++MY+K G + +A FD + +T+S ++++G Q+G EA +F+ M N+
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404
Query: 432 PPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P T VS++ AC+H + G+ + S++ + G E + +ID+ + GK+ +
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVI--IRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 491 ERLIEAMP 498
++ + MP
Sbjct: 463 RQVFDKMP 470
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 11/319 (3%)
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A++VF + D ++N+++ AY A+ L++ M+ ++ + YT +
Sbjct: 48 GQLALARQVFDRI-PAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFV 106
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEIPQ 295
L A ++L DL G HAH +G H + + + LIDLY +C+ G R+ VF ++P
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN---VFAKMPM 163
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQ 354
D+V WN M++GY+ Y + G P+ + V ++ + G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 355 IHALTIK--IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
IHA ++ +E ++ + AL+ MY+KC L A R+F MP N V+ +++I G+
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFV-SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
EA LF+ ML + + T V S L CA + G + +++ G +
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS-GIHADL 342
Query: 472 EHYSCMIDLLGRAGKLTDA 490
+ ++ + +AG + +A
Sbjct: 343 TASNSLLSMYAKAGLINEA 361
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 126/305 (41%), Gaps = 39/305 (12%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ C DL G LHAL K+ + SN + +Y+K G
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL---------------- 357
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
I A FD+I D +SY L+S G E A +FK M+
Sbjct: 358 ---------------INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402
Query: 126 RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ D T+ LI A S+ L K H I G S+ NSL+ Y++ G +D +
Sbjct: 403 NMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
++VF +M +D VSWN+M+ YG H G EA LF M + D T ++ A S
Sbjct: 463 RQVFDKM-PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA-CS 520
Query: 244 LEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
LV G F K G ++DL A+ G + + + + +P + D+ +
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR-GGLLDEAYQFIQSMPLKADVRV 579
Query: 301 WNTMI 305
W ++
Sbjct: 580 WGALL 584
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++ C L GK H + + + N I +Y+KCG + + F++
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
+V S+N ++A Y A LF +Q PD V++ LI+A + G
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M K G++ + +C++ L +R
Sbjct: 530 HWFDTMTHK---------YGILPRMEHYICMVDLL-----------------------AR 557
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G LDEA + M D W +++ A H+
Sbjct: 558 GGLLDEAYQFIQSMPLKADVRVWGALLGACRIHK 591
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 359/659 (54%), Gaps = 60/659 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++L +CV + + + +HA +K ++ N + Y KCG A F++
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N FS+N +L+ + ++ A +F +P+PD S+N ++S +A E AL F D
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + F + ++ ++A + +L + Q+H L + + ++L+ YS+ G
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+R F M +++ VSWNS++ Y Q+ +AL++F M+ + D TLAS+++
Sbjct: 202 VACAQRAFDGMA-VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVS 260
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIP---- 294
A S + GLQ HA ++K ++N + G+ L+D+YAKC + + VF+ +P
Sbjct: 261 ACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCR-RVNEARLVFDRMPLRNV 319
Query: 295 ---------------------------QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ ++V WN +I+GY+Q E +++A+ F L R
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGE-NEEAVRLFLLLKR 378
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI-----RSNRISVNNALVAMYSK 381
P +F +++AC+NL+ LG+Q H +K + I V N+L+ MY K
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMK 438
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG +ED +F+RM E + VS N+MI GYAQ+G G AL +F ML + P ++T + V
Sbjct: 439 CGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGV 498
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
LSAC+H G V EG++YF M+ G P +H++CM+DLLGRAG L +A LI+ MP P
Sbjct: 499 LSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQP 558
Query: 502 ---------------GSIALK--AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
G+I L A ++++P N+ PYV+L+N+YA G+W++V +R+
Sbjct: 559 DNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRK 618
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE 603
MR RGV K+PG SWIE++ ++HVF+ +D HP+ K+IH L+ ++ +MK AGYVP+ +
Sbjct: 619 QMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEAD 677
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 46/376 (12%)
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
Q++V LD A +L + + + + HA +IK+ F I + L+D Y KC
Sbjct: 8 QKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKC 67
Query: 280 S------------------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + + VF+ +P+PD WN M+SG++
Sbjct: 68 GYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFA 127
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
Q + + ++AL F ++ + ++ SF +SAC+ L+ ++G QIHAL K +
Sbjct: 128 QHDRF-EEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLD- 185
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ + +ALV MYSKCG + A+R FD M N VS NS+I Y Q+G +AL +F M++
Sbjct: 186 VYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMD 245
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ P IT SV+SACA + EG + + + + + + ++D+ + ++
Sbjct: 246 NGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVN 305
Query: 489 DAERLIEAMPFN------------PGSIALKAAN-HFLQLEPSNAVPYVMLANIYAASGK 535
+A + + MP + ++KAA F + N V + L Y +G+
Sbjct: 306 EARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGE 365
Query: 536 WEEVATIRRLMRDRGV 551
EE + L++ +
Sbjct: 366 NEEAVRLFLLLKRESI 381
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/714 (34%), Positives = 371/714 (51%), Gaps = 95/714 (13%)
Query: 50 LSAAH-HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
L A H H F + + S N LL Y + + A +LFD+I + ++ LIS +A
Sbjct: 51 LRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFAR 110
Query: 109 -CGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS 165
G +E SLF++M+ + +TLS ++ S NN+ K +H + G
Sbjct: 111 AAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVV 170
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF-----Q 220
+ NS+L Y + + A+ F M E KD VSWN M+ AY + + ++L++F +
Sbjct: 171 LENSILDLYLKCKEFEYAESFFELMIE-KDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK 229
Query: 221 EMVSLQLGLD----------------------------MYTLASILTAFTSLEDLVGGLQ 252
++VS +D +++A IL + SL ++ G Q
Sbjct: 230 DVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEV--GRQ 287
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI----------------PQP 296
H ++ G + + +I S L+++Y KC G M + +++ P+
Sbjct: 288 LHGRVLTFGLNSDGYIRSSLVEMYGKC-GRMDKASTILKDVPLNFLRKGNFGVTCKEPKA 346
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+V W++M+SGY +Y D + F+ + D + +ISAC+N GKQI
Sbjct: 347 RMVSWSSMVSGYVWNGKYED-GMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQI 405
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA KI +R + V ++L+ MYSK G+L+DA +F+++ E N V SMI+G A HG
Sbjct: 406 HAYIQKIGLRIDAY-VGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQ 464
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EA+ LFE ML I P +TFV VL+AC+H G + EG +YF MMKD + PE EHY+
Sbjct: 465 GKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYT 524
Query: 476 CMIDLLGRAGKLTDAERLIEAMP--------------------FNPGSIALKAANHFLQL 515
M++L GRAG L +A+ I FN G + LQ
Sbjct: 525 SMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGK---SVSEMLLQS 581
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
PS+ Y++L+N+ +++ +W+E A +R LM RGV+K+PG SW+++K Q+H F D S
Sbjct: 582 APSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRS 641
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAFGLLSTS 623
HP KEI++YL+ + ++K+ GY D E + HHSEKLA+ F +++TS
Sbjct: 642 HPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTS 701
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI +MKNLRIC DCHN K+ S + REI VRDT+RFH FK CSCG+YW
Sbjct: 702 PRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 56/386 (14%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S L + TS+ H H K G Q + + L+ LY K S ++ K+F+EI
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVK-SSNLDHAHKLFDEITH 95
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
+ W +ISG+++ S+ F+++ G P+ + V+ CS + GK
Sbjct: 96 KNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKG 155
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IHA ++ + + + + N+++ +Y KC E A F+ M E + VS N MI Y + G
Sbjct: 156 IHAWILRNGVGGD-VVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREG 214
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG--------KVAEGQKY----FSMMK 462
++L +F ++ N T + L C + VA G ++ FS+
Sbjct: 215 DVEKSLEMFRNFPNKDVVSWN-TIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIAL 273
Query: 463 DM-------------------FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
+ FG +G S ++++ G+ G++ A +++ +P N
Sbjct: 274 ILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLN--- 330
Query: 504 IALKAANHFLQLEPSNA--VPYVMLANIYAASGKWEE-------------VATIRRLMRD 548
L+ N + + A V + + + Y +GK+E+ V IR +
Sbjct: 331 -FLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATI 389
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDG 574
G +E KQ+H ++ + G
Sbjct: 390 ISACANAGI--LEFGKQIHAYIQKIG 413
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/627 (36%), Positives = 338/627 (53%), Gaps = 43/627 (6%)
Query: 87 LFDQIP-QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--N 143
+F + P + YNT+I +A+ L+ M + D FT S ++ A + N
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
L +H L GFD V +++ YS+ GFL +A +VF +M +K+ VSW M+
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDM-VVKNVVSWTGMI 177
Query: 204 ---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+ +G+ RE A+ LF+ ++ L D + + +L A L DL G + +
Sbjct: 178 CGCIEFGKFRE---AVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC 234
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G +N + + L+D+Y KC G M + VF+ + + D+V W+ MI GY+ +A+
Sbjct: 235 GLSRNVFVATSLVDMYTKC-GSMEEARFVFDGMVEKDIVCWSAMIQGYASNG-LPREAIE 292
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ +V PD + V +S+C++L LG L E SN + + +L+ Y
Sbjct: 293 LFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPV-LGTSLIDFY 351
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+KCG++E+A ++ M E + V N++I+G A +G A +F M + IPP TFV
Sbjct: 352 AKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFV 411
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+L C H G V +G+ YF+ M F P EHY CM+DLL RAG L +A LI+ MP
Sbjct: 412 GLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPM 471
Query: 500 NPGSIAL-------------KAANHFL----QLEPSNAVPYVMLANIYAASGKWEEVATI 542
I + A H L +LEP N+ YV+L+NIY+AS +W+E I
Sbjct: 472 KANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKI 531
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-- 600
R + ++G+QK PG+SW+EV +H F+ D SHP+ ++I+ LE + + +K+AGY P
Sbjct: 532 RSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTT 591
Query: 601 ----------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+KE L HSEKLAVAF L+ST I V+KNLR+CGDCH AIK IS +
Sbjct: 592 EFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKV 651
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
GREI +RD RFHCF DG CSC DYW
Sbjct: 652 TGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 185/418 (44%), Gaps = 40/418 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G +H+L K ++ + + YSKCG L
Sbjct: 106 TFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLR--------- 156
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++FD + ++VS+ +I + G A+ LF+
Sbjct: 157 ----------------------DAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFR 194
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ E DGF + ++ A + +L + + CG V SL+ Y++ G
Sbjct: 195 GLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCG 254
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA+ VF M E KD V W++M+ Y + EA++LF EM + + D Y + L
Sbjct: 255 SMEEARFVFDGMVE-KDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGAL 313
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ SL L G + F N +G+ LID YAKC G M + + V++ + + D
Sbjct: 314 SSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKC-GSMEEALGVYKMMKEKDR 372
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V++N +ISG + + A G F ++ + G P++ +FV ++ C++ L +
Sbjct: 373 VVFNAVISGLAMYGQVG-AAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFN 431
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+++ + + I +V + ++ G L++A L MP + N + S++ G H
Sbjct: 432 SMSHDFSV-TPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLH 488
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 239/694 (34%), Positives = 360/694 (51%), Gaps = 78/694 (11%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIAS------ARQLFDQIPQPDLVSYNTLISAYAD 108
H ++ + ++ + LL AYA I+S A+ +F+QIPQP+L +NTLI YA
Sbjct: 94 HMLRTSRFCDPYTASKLLTAYA----ISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149
Query: 109 CGDTESALSLFKDMREKRFD-TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS 165
D + +F M + + FT L A+S L L LH + I
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLF 209
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ NSL+ Y +G D A RVF M KD VSWN+M+ A+ +AL LFQEM
Sbjct: 210 ILNSLINFYGSSGAPDLAHRVFTNMPG-KDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ ++ T+ S+L+A DL G +++ +GF ++ + + ++D+Y KC G + D
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKC-GCIND 327
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ---------------------------- 317
+F ++ + D+V W TM+ G+++ Y +
Sbjct: 328 AKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKP 387
Query: 318 --ALGCFKKLN-RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
AL F ++ PD+ + +C + A + L G IH K +I N +
Sbjct: 388 RVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLN-CHLAT 446
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+L+ MY+KCGNL A +F + + ++MI A +G G AL LF MLE I P
Sbjct: 447 SLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKP 506
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+TF ++L AC H G V EG++ F M+ ++G P+ +HY C++D+ GRAG L A
Sbjct: 507 NAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASF 566
Query: 494 IEAMPFNP---------------GSIALK--AANHFLQLEPSNAVPYVMLANIYAASGKW 536
IE MP P G++ L A + L+LEP N +V+L+NIYA +G W
Sbjct: 567 IEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDW 626
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
E+V+ +R+LMRD V+K+P S I+V +H F+ D SHP ++I++ L+E+S K K
Sbjct: 627 EKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPI 686
Query: 597 GYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GY PD E+ L HSEKLA+AFGL+ST+ +PI ++KN+RICGDCH
Sbjct: 687 GYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAF 746
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K +S + R+I +RD YRFH F+ G+CSC DYW
Sbjct: 747 AKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 4/248 (1%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQPDLVLWNTMISGYSQ 310
Q HAH++++ + + S L+ YA S K VF +IPQP+L WNT+I GY+
Sbjct: 90 QIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYAS 149
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ + L L+ P+ +F + A S L LG +H + IK + S+ +
Sbjct: 150 SSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSD-L 208
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+ N+L+ Y G + A R+F MP + VS N+MI +A G+ +AL LF+ M
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
++ P IT VSVLSACA + G+ S +++ GF + M+D+ + G + D
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN-GFTEHLILNNAMLDMYVKCGCIND 327
Query: 490 AERLIEAM 497
A+ L M
Sbjct: 328 AKDLFNKM 335
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 35/329 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C + DL G+ + + N L+N + +Y KCGC++ A FN+
Sbjct: 276 TMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKM 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+ +L +A+ A +FD +P ++N LISAY G ALSLF
Sbjct: 336 SEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFH 395
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN----NSLLTCYS 175
+M+ K D TL + AS+ L I H + +Y H ++N SLL Y+
Sbjct: 396 EMQLSKDAKPDEVTLICALCASA-QLGAIDFGHWIHVYIK-KHDINLNCHLATSLLDMYA 453
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L++A VF+ + E KD W++M+ A + +G AL LF M+ + + T
Sbjct: 454 KCGNLNKAMEVFHAV-ERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFT 512
Query: 236 SILTA-------------FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+IL A F +E L G + H + ++D++ + +G
Sbjct: 513 NILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYV------------CVVDIFGR-AGL 559
Query: 283 MRDCMKVFEEIP-QPDLVLWNTMISGYSQ 310
+ E++P P +W ++ S+
Sbjct: 560 LEKAASFIEKMPIPPTAAVWGALLGACSR 588
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 330/591 (55%), Gaps = 36/591 (6%)
Query: 119 FKDMREKRFDTDGFT-LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
F+ + FDT + + + S L ++Q+H I G S+ L++
Sbjct: 77 FQHPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTA 136
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A+R+F + D ++S++ + ++ + ++ M+ YT S+
Sbjct: 137 GSITYARRLFPTVPN-PDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSV 195
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ A L L G + H+H++ G+ + ++ + LI LYAK S DM+ KVF+ +PQ
Sbjct: 196 IKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKAS-DMKVAKKVFDAMPQRT 254
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
++ WN++ISGY Q +++G F + G+ PD + V ++S+CS L G +H
Sbjct: 255 IIAWNSLISGYDQNG-LPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLH 313
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
N + + +L+ MY++CGN+ AR +FD M E N V+ +MI+GY HG G
Sbjct: 314 DYADGNGFDLN-VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYG 372
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+A+ LF M P NITFV+VLSACAH+G + +G++ FS MK+ +G P EH C
Sbjct: 373 RQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVC 432
Query: 477 MIDLLGRAGKLTDAERLIEA-MPFNPG-----------------SIALKAANHFLQLEPS 518
M+D+ GRAG L DA + I+ +P PG + +K A H L +EP
Sbjct: 433 MVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPE 492
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YVML+NIYA +G+ + V +R +M R ++K+ G+S IE+ ++ ++F D SHP
Sbjct: 493 NPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQ 552
Query: 579 IKEIHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGE 626
I+ YL+E+ + ++GYVP ++E+R L +HSEKLA+AFGLL T+ GE
Sbjct: 553 TNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGE 612
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRIC DCH+AIK IS IA REI VRD +RFH FKDG CSC DYW
Sbjct: 613 TIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 15/295 (5%)
Query: 24 LYLKNLVPFSAYLSNH-FILLYSKCGCLSAAHHAFNQTQHANVFSFN-------VLLAAY 75
L+ + ++ A SN+ F + C LSA H V + L+A Y
Sbjct: 175 LFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALY 234
Query: 76 ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
A+ + A+++FD +PQ ++++N+LIS Y G + ++ LF M E F D T+
Sbjct: 235 AKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIV 294
Query: 136 GLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
L+++ S L LH A GFD + SL+ Y+R G + +A+ VF M E
Sbjct: 295 SLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKE- 353
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
++ V+W +M+ YG H G +A++LF EM + + T ++L+A + G +
Sbjct: 354 RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV 413
Query: 254 HAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE-IP-QPDLVLWNTMI 305
+ + ++ G ++D++ + +G + D + ++ IP +P +W +M+
Sbjct: 414 FSSMKEAYGLVPGVEHNVCMVDMFGR-AGLLNDAYQFIKKFIPKEPGPAVWTSML 467
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 362/653 (55%), Gaps = 41/653 (6%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H ++F L+ Y R R AR +F ++P D+V++N +++ YA+ G A++ D
Sbjct: 132 HTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLD 191
Query: 122 MREKR-FDTDGFTLSGLITASSNNLCLIK----QLHCL-AIYCGFDHYASVNNSLLTCYS 175
M++ + TL L+ + + L + +CL A + + +LL Y+
Sbjct: 192 MQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYA 251
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTL 234
+ L A RVF+ M ++++V+W++++ + EA LF++M+ L L ++
Sbjct: 252 KCKQLVYACRVFHGM-PVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSV 310
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
AS L SL DL G Q HA + KSG H + + L+ +YAK +G + + F+EI
Sbjct: 311 ASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAK-AGLINEATMFFDEIA 369
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
D + + ++SG Q + +++A FKK+ PD + V +I ACS+L+ GK
Sbjct: 370 VKDTISYGALLSGCVQNGK-AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
H I I + S+ N+L+ MY+KCG ++ +R++FD+MP + VS N+MIAGY H
Sbjct: 429 CSHGSVI-IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIH 487
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+G EA LF M P ++TF+ +++AC+H+G V EG+ +F M +G P EH
Sbjct: 488 GLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEH 547
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y CM+DLL R G L +A + I++MP + + + +L
Sbjct: 548 YICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLG 607
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P +V+L+NI++A+G+++E A +R + + +G +K PG+SWIE+ +H FV D SH
Sbjct: 608 PEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSH 667
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSEKLAVAFGLLSTSY 624
P ++I++ L+ + +K+ GY D K L++HSEKLA+AFG+LS +
Sbjct: 668 PCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNE 727
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I V KNLR+CGDCH AIK+++ + R I VRDT RFH FK+G+CSCG++W
Sbjct: 728 DKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 217/428 (50%), Gaps = 15/428 (3%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
++A ARQ+FD+IP PD +YN LI AY+ G +A+ L++ M R + +T ++
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLK 108
Query: 140 ASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A S +L + +H A G V+ +L+ Y R A+ VF +M ++D V
Sbjct: 109 ACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM-PMRDVV 167
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
+WN+M+ Y H A+ +M L + TL S+L L G HA+
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 257 LIKSGFHQNSH---IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
+++ QN IG+ L+D+YAKC + C +VF +P + V W+ +I G+ +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYAC-RVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 314 YSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+ +A FK + G S + C++L+ +G Q+HAL K I ++ ++
Sbjct: 287 MT-EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD-LTA 344
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+N+L++MY+K G + +A FD + +T+S ++++G Q+G EA +F+ M N+
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404
Query: 432 PPTNITFVSVLSACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P T VS++ AC+H + G+ + S++ + G E + +ID+ + GK+ +
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVI--IRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 491 ERLIEAMP 498
++ + MP
Sbjct: 463 RQVFDKMP 470
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 11/319 (3%)
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A++VF + D ++N+++ AY A+ L++ M+ ++ + YT +
Sbjct: 48 GQLALARQVFDRI-PAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFV 106
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEIPQ 295
L A ++L DL G HAH +G H + + + LIDLY +C+ G R+ VF ++P
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN---VFAKMPM 163
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQ 354
D+V WN M++GY+ Y + G P+ + V ++ + G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 355 IHALTIK--IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
IHA ++ +E ++ + AL+ MY+KC L A R+F MP N V+ +++I G+
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFV-SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
EA LF+ ML + + T V S L CA + G + +++ G +
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS-GIHADL 342
Query: 472 EHYSCMIDLLGRAGKLTDA 490
+ ++ + +AG + +A
Sbjct: 343 TASNSLLSMYAKAGLINEA 361
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 126/305 (41%), Gaps = 39/305 (12%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ C DL G LHAL K+ + SN + +Y+K G
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL---------------- 357
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
I A FD+I D +SY L+S G E A +FK M+
Sbjct: 358 ---------------INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402
Query: 126 RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ D T+ LI A S+ L K H I G S+ NSL+ Y++ G +D +
Sbjct: 403 NMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
++VF +M +D VSWN+M+ YG H G EA LF M + D T ++ A S
Sbjct: 463 RQVFDKM-PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA-CS 520
Query: 244 LEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
LV G F K G ++DL A+ G + + + + +P + D+ +
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR-GGLLDEAYQFIQSMPLKADVRV 579
Query: 301 WNTMI 305
W ++
Sbjct: 580 WGALL 584
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 42/217 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T ++ C L GK H + + + N I +Y+KCG + + F++
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S +NT+I+ Y G + A +LF
Sbjct: 470 PARDVVS-------------------------------WNTMIAGYGIHGLGKEATTLFL 498
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M+ + F D T LI A S++ + + H I +HY + + L
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLL--- 555
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+R G LDEA + M D W +++ A H+
Sbjct: 556 -ARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHK 591
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 334/560 (59%), Gaps = 39/560 (6%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLH + G V+++L+ YS+ + +VF E + K +W+S++ A+ Q+
Sbjct: 46 QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPK-KSSTTWSSVISAFAQN 104
Query: 210 REGLEALQLFQEMVSLQLGLD--MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
L ALQ F+ M++ + D +Y A+ F D+ G H +K+G++ +
Sbjct: 105 EAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDV--GKSVHCLAVKTGYYCDVF 162
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+GS L+D+YAKC G++ D +F+E+P+ ++V W+ MI GY+Q ++ +AL FK+
Sbjct: 163 VGSSLVDMYAKC-GEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD-GVEALTLFKQALI 220
Query: 328 VGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+D +F VI CS+ + LGK IH L +K+ S+ V +AL+++YSKCG +E
Sbjct: 221 EDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSF-VGSALISLYSKCGVIE 279
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A ++FD +P N NSM+ AQH LFE M + P I F+SVL AC+
Sbjct: 280 GAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACS 339
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
H G V +G++YFS+M+D +G EPE EHY+ ++DLLGRAGKL +A +I+ MP P
Sbjct: 340 HAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A A+ L+++ S++ +V+L+N YAA+G++EE A +R+++RDR
Sbjct: 399 GALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
GV+K+ G SW+E ++H F A D SH EI+ LEE+ +M++AGYV D
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
K + + +HSE+LA+AFGL++ G PI VMKNLR+CGDCH AIKF+S GR + V
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F+DG+CSCGDYW
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 210/422 (49%), Gaps = 32/422 (7%)
Query: 62 HANVFSFNV---------LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
HA++ F + L+ Y++ + Q+FD+ P+ +++++ISA+A
Sbjct: 48 HAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAP 107
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYAS 165
AL F +R DG I S+ C + K +HCLA+ G+
Sbjct: 108 LLALQFF-----RRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V +SL+ Y++ G + +A+ +F EM E ++ VSW+ M+ Y Q +G+EAL LF++ +
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPE-RNVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ ++ +T +S++ +S L G H +K F +S +GS LI LY+KC G +
Sbjct: 222 DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC-GVIEG 280
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+VF+EIP +L LWN+M+ +Q ++ + G F+++ VG P+ F+ V+ ACS
Sbjct: 281 AYQVFDEIPTRNLGLWNSMLIACAQ-HAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACS 339
Query: 346 NLS-PSLGKQIHALT--IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+ G++ +L IE + + +LV + + G L++A + +MP T S
Sbjct: 340 HAGLVEKGREYFSLMRDYGIEPETEHYA---SLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 403 L-NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ +++ G H A + + +LE + + + V + +A A G+ E + M+
Sbjct: 397 VWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGL-HVLLSNAYAAAGRYEEAARMRKML 455
Query: 462 KD 463
+D
Sbjct: 456 RD 457
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 5/266 (1%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ ++L +FT L GLQ HAH++K G + LI+LY+K + ++VF+E
Sbjct: 28 ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFS-LQVFDET 86
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LG 352
P+ W+++IS ++Q E AL F+++ G PDD + AC L S +G
Sbjct: 87 PKKSSTTWSSVISAFAQNEA-PLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVG 145
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K +H L +K + + V ++LV MY+KCG + DAR LFD MPE N VS + MI GYAQ
Sbjct: 146 KSVHCLAVKTGYYCD-VFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G+EAL LF+ L ++ + TF SV+ C+ + + G+ + M F+
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKM-SFDSSSF 263
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMP 498
S +I L + G + A ++ + +P
Sbjct: 264 VGSALISLYSKCGVIEGAYQVFDEIP 289
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 7 KTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
K C R GKS+H L +K ++ + + +Y+KCG + A H F++ NV
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV- 192
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
VS++ +I YA D AL+LFK +
Sbjct: 193 ------------------------------VSWSGMIYGYAQLDDGVEALTLFKQALIED 222
Query: 127 FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
D + FT S +I +SS L L K +H L + FD + V ++L++ YS+ G ++ A
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
+VF E+ ++ WNSM++A QH LF+EM ++ + + S+L A +
Sbjct: 283 QVFDEI-PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHA 341
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNT 303
+ G ++ + + G + + L+DL + +G +++ + V +++P +P +W
Sbjct: 342 GLVEKGREYFSLMRDYGIEPETEHYASLVDLLGR-AGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 304 MISG 307
+++G
Sbjct: 401 LLTG 404
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 37/215 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V++ C L GK +H L LK S+++ + I LYSKCG + A+ F++
Sbjct: 229 TFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N +L A A+ LF+++ +P+ + + +++ A + G E
Sbjct: 289 PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGR 348
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ + + +HYA SL+ R
Sbjct: 349 EYFSLMRDYGIEPET-----------------------------EHYA----SLVDLLGR 375
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
G L EA V +M E W +++ H++
Sbjct: 376 AGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 410
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 320/540 (59%), Gaps = 35/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSL+ Y + G + +A+ VF +M +D VSW ++ Y Q+ EA+ L +M+ +
Sbjct: 99 NSLIHMYCKCGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARF 157
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ +T S+L A + G Q HA +K + ++ ++GS L+D+YA+C M +
Sbjct: 158 RPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCE-QMDMAI 216
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+ + + V WN +I+G+++K + + L F ++ R G+ ++ + SA + +
Sbjct: 217 MVFDRLVSKNEVSWNALIAGFARKAD-GETTLMKFAEMQRNGFGATHFTYSSMFSAFARI 275
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G+ +HA IK + V N ++ MY+K G++ DAR++FDRM + + V+ N+M
Sbjct: 276 GALEQGRWVHAHLIKSGQKLTAF-VGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTM 334
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ AQ+G+G EA+ FE + + I ITF+SVL+AC+H G V EG+ YF MMKD +
Sbjct: 335 LTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YN 393
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAA 509
+PE +HY +DLLGRAG L +A + MP P + AA
Sbjct: 394 VQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAA 453
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+H +L+P + P V+L NIYA++GKW + A +R++M+ GV+K+P SW++++ +H+F
Sbjct: 454 DHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMF 513
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
VA+D +HP +I+ EE++ ++K+AGYVP ++E +L +HSEK+A+AF
Sbjct: 514 VADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAF 573
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L++ G I +MKN+RICGDCH+A K++S + REI VRDT RFH F +G CSCGDYW
Sbjct: 574 ALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 137/263 (52%), Gaps = 5/263 (1%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SI+ A ++L G HAHL +S ++ + + LI +Y KC G + D VF+++P
Sbjct: 65 SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKC-GAVSDARHVFDKMPS 123
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
D+V W +I+GY+Q +A+G + R + P+ +F ++ A S+G+Q
Sbjct: 124 RDVVSWTYLIAGYAQ-NYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ 182
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HAL +K + + V +AL+ MY++C ++ A +FDR+ N VS N++IAG+A+
Sbjct: 183 MHALAVKYNWDED-VYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKA 241
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
G L F M T+ T+ S+ SA A G + +G+ + + G +
Sbjct: 242 DGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS-GQKLTAFVG 300
Query: 475 SCMIDLLGRAGKLTDAERLIEAM 497
+ M+ + ++G + DA ++ + M
Sbjct: 301 NTMLGMYAKSGSMVDARKVFDRM 323
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 45/265 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK G+ +HAL +K Y+ + + +Y++C + A F++
Sbjct: 163 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 222
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S+N L+A +AR+ D E+ L F
Sbjct: 223 VSKNEVSWNALIAGFARK-------------------------------ADGETTLMKFA 251
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ F FT S + +A + L + +H I G A V N++L Y+++G
Sbjct: 252 EMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSG 311
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A++VF M + +D V+WN+M+ A Q+ G EA+ F+E+ + L+ T S+L
Sbjct: 312 SMVDARKVFDRMDK-RDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVL 370
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH 263
TA + H L+K G H
Sbjct: 371 TACS-----------HGGLVKEGKH 384
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H Q F N +L YA+ + AR++FD++ + DLV++NT+++A A G +
Sbjct: 287 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKE 346
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGF------DHYASVNN 168
A++ F+++R+ + T ++TA S+ + + H + + DHY S +
Sbjct: 347 AVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVD 406
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
L R G L EA ++M W +++ A H+
Sbjct: 407 LL----GRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 444
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 330/591 (55%), Gaps = 36/591 (6%)
Query: 119 FKDMREKRFDTDGFT-LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
F+ + FDT + + + S L ++Q+H I G S+ L++
Sbjct: 13 FQHPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTA 72
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + A+R+F + D ++S++ + ++ + ++ M+ YT S+
Sbjct: 73 GSITYARRLFPTVPN-PDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSV 131
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ A L L G + H+H++ G+ + ++ + LI LYAK S DM+ KVF+ +PQ
Sbjct: 132 IKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKAS-DMKVAKKVFDAMPQRT 190
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
++ WN++ISGY Q +++G F + G+ PD + V ++S+CS L G +H
Sbjct: 191 IIAWNSLISGYDQNG-LPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLH 249
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
N + + +L+ MY++CGN+ AR +FD M E N V+ +MI+GY HG G
Sbjct: 250 DYADGNGFDLN-VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYG 308
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+A+ LF M P NITFV+VLSACAH+G + +G++ FS MK+ +G P EH C
Sbjct: 309 RQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVC 368
Query: 477 MIDLLGRAGKLTDAERLIEA-MPFNPG-----------------SIALKAANHFLQLEPS 518
M+D+ GRAG L DA + I+ +P PG + +K A H L +EP
Sbjct: 369 MVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPE 428
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YVML+NIYA +G+ + V +R +M R ++K+ G+S IE+ ++ ++F D SHP
Sbjct: 429 NPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQ 488
Query: 579 IKEIHNYLEEMSRKMKQAGYVP---------DKEKR---LVHHSEKLAVAFGLLSTSYGE 626
I+ YL+E+ + ++GYVP ++E+R L +HSEKLA+AFGLL T+ GE
Sbjct: 489 TNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGE 548
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRIC DCH+AIK IS IA REI VRD +RFH FKDG CSC DYW
Sbjct: 549 TIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 38/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C L GK +H+ H ++ CG S
Sbjct: 127 TFTSVIKACADLSALRLGKEIHS---------------HVMV----CGYGS--------- 158
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++ L+A YA+ + A+++FD +PQ ++++N+LIS Y G + ++ LF
Sbjct: 159 ---DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFH 215
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E F D T+ L+++ S L LH A GFD + SL+ Y+R G
Sbjct: 216 LMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCG 275
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ VF M E ++ V+W +M+ YG H G +A++LF EM + + T ++L
Sbjct: 276 NVSKAREVFDSMKE-RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVL 334
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE-IP-Q 295
+A + G + + + ++ G ++D++ + +G + D + ++ IP +
Sbjct: 335 SACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGR-AGLLNDAYQFIKKFIPKE 393
Query: 296 PDLVLWNTMI 305
P +W +M+
Sbjct: 394 PGPAVWTSML 403
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/724 (33%), Positives = 374/724 (51%), Gaps = 83/724 (11%)
Query: 1 TFRQVLKTCV--GRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF VL +CV G L +++H + + A++ + Y K G L A F
Sbjct: 114 TFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF- 172
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
LR + D+ P LV+ + +ISA G + +L L
Sbjct: 173 --------------------LRKS------DEEPSTSLVTCSAMISACWQNGWPQESLRL 206
Query: 119 FKDMREKRFDTDGFTLSGLITASS-----NNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
F M + G TL ++ A S + + + + D+ + +LLT
Sbjct: 207 FYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNV--LGTTLLTT 264
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y+R+ L A+ F + + D VSWN+M AY QH EAL LF+ M+ + + T
Sbjct: 265 YARSNDLSRARATFDAI-QSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVAT 323
Query: 234 LASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ LTA + G + + L ++G ++ + + +++YAKC G + D VF
Sbjct: 324 FITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC-GSLADARAVF 382
Query: 291 EEIP--QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISA-CSN 346
E I + D + WN+M++ Y +A F+ + P+ +FV V+ A S
Sbjct: 383 ERISPTRRDCITWNSMLAAYGH-HGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSR 441
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLN 404
S + G++IHA + S+ + + NAL+ MY+KCG+L+DA+ +FD+ + + ++
Sbjct: 442 TSIAQGREIHARVVSNGFESDTV-IQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWT 500
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
S++AGYAQ+G AL+LF M + + P +ITF+S L+AC H GK+ +G + S M
Sbjct: 501 SLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPD 560
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIE-------------------AMPFNPGSIA 505
G P +H+SC++DLLGR G+L +AE+L+E + G
Sbjct: 561 HGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKNSKELERGE-- 618
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+ A +QL+P A Y++LA++YAA+G+W E ATIR+ M D+G++ PG S +EV ++
Sbjct: 619 -RCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQE 677
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D SHP +EI+ LE + +K AGYV D KE+ L+ HSEKL
Sbjct: 678 LHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKL 737
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL+ST G P+ V+KNLR+C DCH A K IS + GR+I +RD+ R+H F G CSC
Sbjct: 738 AIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSC 797
Query: 674 GDYW 677
GDYW
Sbjct: 798 GDYW 801
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 254/547 (46%), Gaps = 62/547 (11%)
Query: 40 FILLYSKCGCL---SAAHHAFNQTQ----HANVFSFNVLLAAYARQLRIASARQLFDQIP 92
I L + C CL +A +Q N N L++ Y++ + A+Q FD++P
Sbjct: 10 LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 69
Query: 93 QP---DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF----------TLSGLIT 139
+ D+V++N +ISA+ G AL LF+DM D DG L +
Sbjct: 70 RASKRDVVTWNAMISAFLRNGSAREALQLFRDM-----DHDGAPPPNSVTFVSVLDSCVE 124
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE--- 196
A +L ++ +H + G + A V +L+ Y + G LD+A VF + +
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF--- 253
V+ ++M+ A Q+ E+L+LF M TL S+L A + L VG
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP--VGSATAFVL 242
Query: 254 -HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
A + S N +G+ L+ YA+ S D+ F+ I PD+V WN M + Y Q
Sbjct: 243 EQAMEVVSATRDNV-LGTTLLTTYAR-SNDLSRARATFDAIQSPDVVSWNAMAAAYLQHH 300
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP----SLGKQIHALTIKIEIRSNR 368
+AL F+++ G P +F+ ++AC+ P ++GK+I +L + + +
Sbjct: 301 R-PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD- 358
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+V NA + MY+KCG+L DAR +F+R+ + ++ NSM+A Y HG+G EA LF+ M
Sbjct: 359 TAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAM 418
Query: 427 -LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
E + P +TFV+VL A +A+G++ + + GFE + + ++++ + G
Sbjct: 419 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCG 477
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
L DA+ + + N + + + L YA G+ E +
Sbjct: 478 SLDDAQAIFDKSSSN----------------QEDVIAWTSLVAGYAQYGQAERALKLFWT 521
Query: 546 MRDRGVQ 552
M+ +GV+
Sbjct: 522 MQQQGVR 528
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 14/226 (6%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+ L +++ A + L +L G + H+ + F +NS +G+ LI +Y+KC G + D + F+
Sbjct: 8 HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKC-GSLIDAKQAFD 66
Query: 292 EIPQP---DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY-HPDDCSFVCVISACSN- 346
+P+ D+V WN MIS + + + +AL F+ ++ G P+ +FV V+ +C
Sbjct: 67 RLPRASKRDVVTWNAMISAF-LRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEA 125
Query: 347 --LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF----DRMPEHNT 400
LS + IH + I V ALV Y K G+L+DA +F D P +
Sbjct: 126 GLLSLEDVRAIHGRIVGAGIEREAF-VRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
V+ ++MI+ Q+G E+LRLF M P+ +T VSVL+AC+
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ + + +++ACS L + G++IH+ + N + + NAL++MYSKCG+L DA+
Sbjct: 4 RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSV-LGNALISMYSKCGSLIDAK 62
Query: 390 RLFDRMP---EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN-ITFVSVLSAC 445
+ FDR+P + + V+ N+MI+ + ++G EAL+LF M PP N +TFVSVL +C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 446 AHTGKVA-EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
G ++ E + G E E + ++D G+ G L DA
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDA 168
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 323/574 (56%), Gaps = 40/574 (6%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A N+L +H + GFD + L+ Y G +D A++VF E E + W
Sbjct: 89 AQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRE-RTIYVW 147
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT----SLEDLVGGLQFHA 255
N++ A G E L L+ +M + + D +T +L A S+ L G + HA
Sbjct: 148 NALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHA 207
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
H+++ G+ N H+ + L+D+YAK G + VF +P + V W+ MI+ ++ K E
Sbjct: 208 HILRHGYEANIHVMTTLLDVYAK-FGSVSYANSVFCAMPTKNFVSWSAMIACFA-KNEMP 265
Query: 316 DQALGCFKKLNRVGYH--PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+AL F+ + + P+ + V V+ AC+ L+ GK IH ++ + S + V
Sbjct: 266 MKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDS-ILPVL 324
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
NAL+ MY +CG + +R+FD M + VS NS+I+ Y HG G +A+++FE M+
Sbjct: 325 NALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSS 384
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P+ I+F++VL AC+H G V EG+ F M + P EHY+CM+DLLGRA +L +A +
Sbjct: 385 PSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 444
Query: 493 LIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
LIE M F PG +A +A+ +LEP NA YV+LA+IYA +
Sbjct: 445 LIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKM 504
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
W E ++ +L+ RG+QK PG SWIEVK++++ FV+ D +P I+EIH L ++S +MK
Sbjct: 505 WSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKA 564
Query: 596 AGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GYVP +KE+ ++ HSEKLAVAFGL++T GE I + KNLR+C DCH
Sbjct: 565 QGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAV 624
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KFIS A REI VRD RFH FKDG CSCGDYW
Sbjct: 625 TKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 10/258 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H AN+ LL YA+ ++ A +F +P + VS++ +I+ +A
Sbjct: 208 HILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMK 267
Query: 115 ALSLFKDMREKRFDT--DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
AL LF+ M + D+ + T+ ++ A + L K +H + G D V N+L
Sbjct: 268 ALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNAL 327
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+T Y R G + +RVF M +D VSWNS++ YG H G +A+Q+F+ M+
Sbjct: 328 ITMYGRCGEILMGQRVFDNMKN-RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386
Query: 231 MYTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ ++L A S LV G + F + L K H + ++DL + + + + +K
Sbjct: 387 YISFITVLGA-CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR-ANRLDEAIK 444
Query: 289 VFEEIP-QPDLVLWNTMI 305
+ E++ +P +W +++
Sbjct: 445 LIEDMHFEPGPTVWGSLL 462
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 81/207 (39%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L GK +H L+ + + N I +Y +CG + F+
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNM 347
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFD----QIPQPDLVSYNTLISAYADCGDTESAL 116
++ +V S+N L++ Y A Q+F+ Q P +S+ T++ A + G E
Sbjct: 348 KNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
LF+ M K I+ G +HYA + + L R
Sbjct: 408 ILFESMLSK----------------------------YRIHPGMEHYACMVDLL----GR 435
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
LDEA ++ +M W S++
Sbjct: 436 ANRLDEAIKLIEDMHFEPGPTVWGSLL 462
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/627 (37%), Positives = 340/627 (54%), Gaps = 74/627 (11%)
Query: 121 DMRE--KRFDTDGFTLSGLIT------ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
++RE +RF + FT + L T + +L KQLHCL + GF + N L++
Sbjct: 28 NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMS 87
Query: 173 CYS-------------------------------RNGFLDEAKRVFYEMGEIKDEVSWNS 201
YS R G L A++VF EM + K +WN+
Sbjct: 88 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRK-LTTWNA 146
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Q E L LF+EM L D YTL S+ + L + G Q H + IK G
Sbjct: 147 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 206
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+ + S L +Y + +G ++D V +P +LV WNT+I G +Q + L
Sbjct: 207 LELDLVVNSSLAHMYMR-NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYL 264
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+K + G P+ +FV V+S+CS+L+ G+QIHA IKI S +V ++L++MYS
Sbjct: 265 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV-AVVSSLISMYS 323
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFV 439
KCG L DA + F + + V +SMI+ Y HG G EA+ LF M E TN+ + F+
Sbjct: 324 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 383
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
++L AC+H+G +G + F MM + +GF+P +HY+C++DLLGRAG L AE +I +MP
Sbjct: 384 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 443
Query: 500 NP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
+A + LQ++P+++ YV+LAN++A++ +W +V+ +
Sbjct: 444 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEV 503
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD- 601
R+ MRD+ V+K+ G SW E K ++H F D S KEI++YL+E++ +MK GY PD
Sbjct: 504 RKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDT 563
Query: 602 -----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
KE LV HSEKLAVAF L+ G PI ++KNLR+C DCH A K+IS I
Sbjct: 564 ASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVI 623
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
REIT+RD RFH F +G+CSCGDYW
Sbjct: 624 KNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 213/435 (48%), Gaps = 10/435 (2%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +++C R+ L +GK LH L + + ++ NH + +YSK G +A + + +
Sbjct: 47 FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMR 106
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N S N+L+ Y R + +AR++FD++P L ++N +I+ E LSLF++
Sbjct: 107 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 166
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M F D +TL + + S+ ++ + +Q+H I G + VN+SL Y RNG
Sbjct: 167 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 226
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L + + V M +++ V+WN++++ Q+ L L++ M + T ++L+
Sbjct: 227 LQDGEIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 285
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ + L G Q HA IK G + S LI +Y+KC G + D K F E D V
Sbjct: 286 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC-GCLGDAAKAFSEREDEDEV 344
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
+W++MIS Y + D+A+ F + + ++ +F+ ++ ACS+ S K +
Sbjct: 345 MWSSMISAYGFHGQ-GDEAIELFNTMAEQTNMEINEVAFLNLLYACSH-SGLKDKGLELF 402
Query: 359 TIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
+ +E + + + +V + + G L+ A + MP + + V ++++ H
Sbjct: 403 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 462
Query: 416 GMEALRLFEWMLETN 430
A R+F+ +L+ +
Sbjct: 463 AEMAQRVFKEILQID 477
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C G+ +HA +K + + I +YSKCGCL A AF++
Sbjct: 279 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 338
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-----DLVSYNTLISAYADCGDTESA 115
+ + ++ +++AY + A +LF+ + + + V++ L+ A + G +
Sbjct: 339 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF M EK GF G HY V + L
Sbjct: 399 LELFDMMVEKY----GFKP------------------------GLKHYTCVVDLL----G 426
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LD+A+ + M D V W +++ A H+ A ++F+E++ +
Sbjct: 427 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 476
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/606 (37%), Positives = 334/606 (55%), Gaps = 72/606 (11%)
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
+S Y+ GD SA++L++ MR+K F +
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMS--------------------------------- 27
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
+N L+ Y R G L A++VF EM + K +WN+M+ Q E L LF+EM
Sbjct: 28 ----SNILINGYVRAGDLVSARKVFDEMPDRK-LTTWNAMIAGLIQFEYNEEGLSLFREM 82
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
L D YTL S+ + L + G Q H + IK G + + S L +Y + +G
Sbjct: 83 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMR-NGK 141
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
++D V +P +LV WNT+I G +Q + L +K + G P+ +FV V+S
Sbjct: 142 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLS 200
Query: 343 ACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+CS+L+ G+QIHA IKI S +V ++L++MYSKCG L DA + F + + V
Sbjct: 201 SCSDLAIRGQGQQIHAEAIKIGASSVV-AVVSSLISMYSKCGCLGDAAKAFSEREDEDEV 259
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
+SMI+ Y HG G EA++LF M E T + + F+++L AC+H+G +G + F M
Sbjct: 260 MWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDM 319
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI---------------- 504
M + +GF+P +HY+C++DLLGRAG L AE +I++MP P +
Sbjct: 320 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAE 379
Query: 505 -ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
A K L+++P+++ YV+LAN++A++ +W +V+ +R+ MRD+ V+K+ G SW E K
Sbjct: 380 MAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHK 439
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSE 611
++H F D S KEI++YL+E++ +MK GY PD KE LV HSE
Sbjct: 440 GEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSE 499
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLAVAF L+ G PI ++KNLR+C DCH A K+IS I REIT+RD RFH F +G+C
Sbjct: 500 KLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKC 559
Query: 672 SCGDYW 677
SCGDYW
Sbjct: 560 SCGDYW 565
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C G+ +HA +K + + I +YSKCGCL A AF++
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-----DLVSYNTLISAYADCGDTESA 115
+ + ++ +++AY + A +LF+ + + + V++ L+ A + G +
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKG 313
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF M EK GF G HY V + L
Sbjct: 314 LELFDMMVEKY----GFK------------------------PGLKHYTCVVDLL----G 341
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LD+A+ + M D V W +++ A H+ A ++F+E++ +
Sbjct: 342 RAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEI 391
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/710 (34%), Positives = 370/710 (52%), Gaps = 75/710 (10%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L++ V R + G+++HA L+ P ++L NH + +YSK
Sbjct: 14 LESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSK------------------ 55
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLFKDMR 123
L + ++ QL + P +V++ +LIS SAL F +MR
Sbjct: 56 --------------LDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMR 101
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + FT + AS++ + KQLH LA+ G V S YS+ G
Sbjct: 102 RECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRP 161
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+ +F EM ++ +WN+ + Q L+A+ F++ + + + T + L A
Sbjct: 162 EARNMFDEMPH-RNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNAC 220
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP--QPDLV 299
+ L G Q H +++S + ++ + +GLID Y KC GD+ VF I + ++V
Sbjct: 221 ADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKC-GDIVSSELVFSRIGSGRRNVV 279
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W ++++ Q E ++A F + R P D V+SAC+ L LG+ +HAL
Sbjct: 280 SWCSLLAALVQNHE-EERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHAL 337
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K + N I V +ALV +Y KCG++E A ++F MPE N V+ N+MI GYA G
Sbjct: 338 ALKACVEEN-IFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDM 396
Query: 419 ALRLFEWMLETN--IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
AL LF+ M + I + +T VSVLSAC+ G V G + F M+ +G EP EHY+C
Sbjct: 397 ALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYAC 456
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSN 519
++DLLGR+G + A I+ MP P G L AA +L+P +
Sbjct: 457 VVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDD 516
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ +V+ +N+ A++G+WEE +R+ MRD G++K G+SW+ VK ++HVF A+D H
Sbjct: 517 SGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKN 576
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI L ++ +MK+AGYVPD K + +HSEK+A+AFGL++ G P
Sbjct: 577 SEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVP 636
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLRIC DCH+AIKFIS I GREI VRD RFH FKDG CSC DYW
Sbjct: 637 IRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 38/212 (17%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
VL C L G+S+HAL LK V + ++ + + LY KCG + A F +
Sbjct: 317 SVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPER 376
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDL---VSYNTLISAYADC---GDTESALS 117
N+ ++N ++ YA + A LF ++ +SY TL+S + C G E L
Sbjct: 377 NLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQ 436
Query: 118 LFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+F+ MR + I G +HYA V + L R+
Sbjct: 437 IFESMRGR----------------------------YGIEPGAEHYACVVDLL----GRS 464
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
G +D A M + W +++ A H
Sbjct: 465 GLVDRAYEFIKRMPILPTISVWGALLGACKMH 496
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/620 (36%), Positives = 343/620 (55%), Gaps = 54/620 (8%)
Query: 100 NTLISAYADCGDTESALSLF---KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
N LI + G+ + AL L + ++ F+ ++ A N+L +H +
Sbjct: 51 NQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYS-----CAQKNSLSYGLDVHRCLV 105
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
GFD + L+ Y G +D A +VF E E + WN++ A G E L
Sbjct: 106 DSGFDQDPFLATKLINMYYELGSIDRALKVFDETRE-RTIYVWNALFRALAMVGHGKELL 164
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFT----SLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
L+ +M + D +T +L A S+ L G + HAH+++ G+ N H+ + L
Sbjct: 165 DLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTL 224
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-----NR 327
+D+YAK G + VF +P + V W+ MI+ ++ K E +AL F+ + N
Sbjct: 225 LDVYAK-FGSVSYANSVFCAMPTKNFVSWSAMIACFA-KNEMPMKALELFQLMMFEACNS 282
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
V P+ + V ++ AC+ L+ GK IH ++ ++ S + V NAL+ MY +CG +
Sbjct: 283 V---PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDS-ILPVLNALITMYGRCGEVL 338
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+R+FD M + + VS NS+I+ Y HG G +A+++FE M+ + P+ I+F++VL AC+
Sbjct: 339 MGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACS 398
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---- 502
H G V EG+ F M + P EHY+CM+DLLGRA +L +A +LIE M F PG
Sbjct: 399 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVW 458
Query: 503 -------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A +A+ +LEP NA YV+LA+IYA + W E ++ +L+ R
Sbjct: 459 GSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEAR 518
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--------- 600
G+QK PG SWIEVK++++ FV+ D +P I+EIH L ++S +MK GYVP
Sbjct: 519 GLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDL 578
Query: 601 ---DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
+KE+ ++ HSEKLAVAFGL++T+ GE I + KNLR+C DCH KFIS A REI V
Sbjct: 579 DEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILV 638
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F+DG CSCGDYW
Sbjct: 639 RDVNRFHHFRDGVCSCGDYW 658
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H AN+ LL YA+ ++ A +F +P + VS++ +I+ +A
Sbjct: 208 HILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMK 267
Query: 115 ALSLFKDMREKRFDT--DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
AL LF+ M + ++ + T+ ++ A + L K +H + D V N+L
Sbjct: 268 ALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNAL 327
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+T Y R G + +RVF M + +D VSWNS++ YG H G +A+Q+F+ M+ +
Sbjct: 328 ITMYGRCGEVLMGQRVFDNMKK-RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPS 386
Query: 231 MYTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ ++L A S LV G + F + L K H + ++DL + + + + +K
Sbjct: 387 YISFITVLGA-CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR-ANRLGEAIK 444
Query: 289 VFEEIP-QPDLVLWNTMI 305
+ E++ +P +W +++
Sbjct: 445 LIEDMHFEPGPTVWGSLL 462
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C G L GK +H L+ + + N I +Y +CG + F+
Sbjct: 288 TMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNM 347
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFD----QIPQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N L++ Y A Q+F+ Q P +S+ T++ A + G E
Sbjct: 348 KKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407
Query: 117 SLFKDMREK 125
LF+ M K
Sbjct: 408 ILFESMLSK 416
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/640 (35%), Positives = 365/640 (57%), Gaps = 39/640 (6%)
Query: 71 LLAAYARQLRIASARQ-LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFD 128
L AAYAR +A+A L + ++N +I+A++ G SAL +F+ + R D
Sbjct: 48 LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPAARPD 107
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ FTL+ A +L + + A G+ V +SLL Y+R G + +A +VF
Sbjct: 108 STTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFV 167
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M +D V+W++MV + + L+A+Q+++ M + D + ++ A T+ ++
Sbjct: 168 RMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H HL++ G + + L+D+YAK +G + +VF + + V W+ MISG+
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAK-NGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSN 367
+Q + SD+AL F+ + G PD + V + ACSN+ LG+ +H ++ N
Sbjct: 286 AQNGQ-SDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFN 343
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
I + A + MYSKCG+L A+ LF+ + + + + N+MIA HG G +AL LF+ M
Sbjct: 344 CI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
ET + P + TF S+LSA +H+G V EG+ +F M + F P +HY C++DLL R+G +
Sbjct: 403 ETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLV 462
Query: 488 TDAERLIEAMPFNPGSIAL------------------KAANHFLQLEPSNAVPYVMLANI 529
+A L+ +M P ++A+ A++ L+L+P + +++N+
Sbjct: 463 EEASDLLTSMKAEP-TVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
YAA+ KW++V +R+LM+D G +K PG S IE++ HVFV ED SHP +EI + + ++
Sbjct: 522 YAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKL 581
Query: 590 SRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
+M++ GY+P KE++L +HSE+LA+AFGLL+T G ++++KNLR+C
Sbjct: 582 DLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVC 641
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH+AIK+IS IA REI VRD RFH FKDG CSC DYW
Sbjct: 642 GDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 172/352 (48%), Gaps = 18/352 (5%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+ +LH L I + + +SL Y+R G L A+ +WN+++ A+
Sbjct: 27 LARLHALLIVSSSASHTLI-SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ AL++F+ + D T L+A L DL GG +G+ +
Sbjct: 86 RRGSPASALRVFRALPPAARP-DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ S L+ LYA+ G M D +KVF +P+ D V W+TM++G+ + D A+ ++++
Sbjct: 145 VCSSLLHLYARW-GAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLD-AIQMYRRMRE 202
Query: 328 VGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G D+ + VI AC+ + +G +H ++ +R + ++ + LV MY+K G L+
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATS-LVDMYAKNGLLD 261
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A R+F M N VS ++MI+G+AQ+G EALRLF M + I P + VS L AC+
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACS 321
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM-----IDLLGRAGKLTDAERL 493
+ G + + + + GF ++C+ ID+ + G L A+ L
Sbjct: 322 NIG-------FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQML 366
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 146/348 (41%), Gaps = 53/348 (15%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C R++ G S+H L++ + + + +Y+K G L A F H N
Sbjct: 215 VIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRN 274
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
S+ + +IS +A G ++ AL LF++M+
Sbjct: 275 DVSW-------------------------------SAMISGFAQNGQSDEALRLFRNMQA 303
Query: 125 KRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D L + A SN L L + +H I FD + + + YS+ G L
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGF-IVRRFDFNCILGTAAIDMYSKCGSLAS 362
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F + + +D + WN+M+ G H G +AL LFQEM + D T AS+L+A
Sbjct: 363 AQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSAL- 420
Query: 243 SLEDLV--GGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-P 294
S LV G L F H + + H L+DL A+ SG + + + +
Sbjct: 421 SHSGLVEEGKLWFGRMVNHFKITPAEKHYVC-----LVDLLAR-SGLVEEASDLLTSMKA 474
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+P + +W ++SG ++ LG N + PDD + ++S
Sbjct: 475 EPTVAIWVALLSGCLNNKKLE---LGESIADNILELQPDDVGVLALVS 519
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 349/631 (55%), Gaps = 55/631 (8%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ V ++C G L G LHA LK + + +Y+KCG L+ A FN
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN--TLISAYADCGDTESALSLF 119
++ +N ++ R + A Q F + + L +N +L A++ C +
Sbjct: 340 KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGL-GFNEISLSGAFSACASIKG----- 393
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D DG +QLH L++ V NS+L Y +
Sbjct: 394 --------DLDG-----------------RQLHSLSVKSTLRSNICVANSILDMYGKCEA 428
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L EA +F EM E +D VSWN+++ A+ Q+ E L LF M+ L++ D +T S+L
Sbjct: 429 LSEACCMFDEM-ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLK 487
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A +S + L G++ H +IKSG +S +G LID+Y KC G + + K+ + I Q +V
Sbjct: 488 ACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKC-GMIEEAKKIHDRIEQQTMV 546
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHAL 358
WN +I+G++ + +S+ A F ++ ++ PD+ ++ V+ AC+NL S LGKQIH
Sbjct: 547 SWNAIIAGFTLLK-HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQ 605
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK+E+ S+ + + + LV MYSKCGN++D+ +F++ P + V+ N+MI GYAQHG+G E
Sbjct: 606 IIKLELHSD-VYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEE 664
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL FE M N+ P + TFVS+L ACAH G + +G YF+ M +G EP+ EHYSCMI
Sbjct: 665 ALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMI 724
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
D++GR+G++++A +LI+ MPF + IA KA N LQLEP ++
Sbjct: 725 DIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSS 784
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
++L+NIYA +G W +V+ +R++MR ++K+PG SWIEVK ++H F+ + +HP +E
Sbjct: 785 ACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEE 844
Query: 582 IHNYLEEMSRKMKQAGYVPDKEKRLVHHSEK 612
I+ L + +MK GY+PD + + SE+
Sbjct: 845 IYKILSVLLDEMKWIGYIPDIDFLIDEESEE 875
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 264/499 (52%), Gaps = 13/499 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF +++ C L GK HA + + +P Y+SN + +Y +C L+ A+ F +
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIP-DVYISNCLMKMYLRCSHLNYAYKVFEK 103
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+N +++ YA + A + F P+ D+VS+N+++S + G+ ++ +F
Sbjct: 104 MSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVF 163
Query: 120 KDM-REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
DM R + D T + ++ A S + L Q+H L + GF ++LL Y++
Sbjct: 164 LDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAK 223
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
LD++ ++F E+ +K+ V W++++ Q+ E + L+LF+EM + +G+ AS
Sbjct: 224 CKRLDDSLKIFSEI-PVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ + L L G Q HAH +K F + +G+ +D+YAKC G + D ++F +P+
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKC-GSLADAQRIFNSLPKH 341
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQI 355
L +N +I G + E+ +AL F+ L + G ++ S SAC+++ L G+Q+
Sbjct: 342 SLQCYNAIIVGCVRNEK-GFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H+L++K +RSN I V N+++ MY KC L +A +FD M + VS N++IA + Q+G
Sbjct: 401 HSLSVKSTLRSN-ICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHY 474
E L LF ML + P T+ SVL AC+ + G + + ++K G +
Sbjct: 460 EEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG-- 517
Query: 475 SCMIDLLGRAGKLTDAERL 493
+ID+ + G + +A+++
Sbjct: 518 GALIDMYCKCGMIEEAKKI 536
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C ++ L +G +H +K+ + +++ I +Y KCG + A
Sbjct: 481 TYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEA------- 533
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++ D+I Q +VS+N +I+ + +E A S F
Sbjct: 534 ------------------------KKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFY 569
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + D FT + ++ A +N ++ L KQ+H I + ++L+ YS+ G
Sbjct: 570 EMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCG 629
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++ VF E KD V+WN+M+ Y QH G EAL F+ M + + T SIL
Sbjct: 630 NMQDSALVF-EKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSIL 688
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + + GL F+A L + G S +ID+ + SG + + +K+ +E+P +
Sbjct: 689 RACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGR-SGRISEALKLIQEMPFEA 747
Query: 297 DLVLWNTMIS 306
D V+W T++S
Sbjct: 748 DAVIWRTLLS 757
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/560 (37%), Positives = 319/560 (56%), Gaps = 30/560 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF + L+ Y + AR++FD +P+ + VS+ T+IS YA AL LF+ MR
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 124 EKRFDTDGFTLSGLITASS-----NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + F + +++A + NN KQ+HC+A+ G SV N+L+T Y++ G
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNN---GKQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A + F E K+ ++W++M+ Y Q + +AL+LF M + +T ++
Sbjct: 259 SLDDALQTF-ETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G Q H +L+K GF ++ + L+D+YAKCS + D K F+ + +PD+
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS-SIVDARKGFDYLQEPDI 376
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
VLW +MI GY Q E D AL + ++ G P++ + V+ ACS+L+ GKQIHA
Sbjct: 377 VLWTSMIGGYVQNGENED-ALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHA 435
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
T+K + + +AL MY+KCG L+D +F RMP + +S N+MI+G +Q+G G
Sbjct: 436 RTVKYGF-GLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LFE M P +TFV++LSAC+H G V G YF MM D FG +P EHY+CM
Sbjct: 495 EALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACM 554
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+D+L RAGKL +A E+ + G + A ++L +
Sbjct: 555 VDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQES 614
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L++IY+A G+WE+V +RR+M+ RGV K+PG SWIE+K +HVFV +D HP I
Sbjct: 615 SAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIG 674
Query: 581 EIHNYLEEMSRKMKQAGYVP 600
+IH L ++S++MK GY P
Sbjct: 675 DIHVELRQLSKQMKDEGYEP 694
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 240/454 (52%), Gaps = 14/454 (3%)
Query: 52 AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
A H ++ + V+ N L+ YA+ R+ A+ +F++I D+VS+N +I+ Y+ G
Sbjct: 27 ALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGP 86
Query: 112 TESA--LSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVN 167
+ S+ + LF+ MR + + T +G+ TA+S + + H +AI V
Sbjct: 87 SGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVG 146
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+SL+ Y + G EA++VF M E ++ VSW +M+ Y + EAL LF+ M +
Sbjct: 147 SSLMNMYCKAGLTPEARKVFDTMPE-RNSVSWATMISGYASQKLAAEALGLFRLMRREEE 205
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
G + + S+L+A T E + G Q H +K+G +G+ L+ +YAKC G + D +
Sbjct: 206 GENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC-GSLDDAL 264
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+ FE + + W+ MI+GY+Q + SD+AL F ++ G P + +FV VI+ACS+L
Sbjct: 265 QTFETSSDKNSITWSAMITGYAQSGD-SDKALKLFSSMHLSGIRPSEFTFVGVINACSDL 323
Query: 348 SPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ GKQ+H +K+ S +I V ALV MY+KC ++ DAR+ FD + E + V SM
Sbjct: 324 GAAWEGKQVHDYLLKLGFES-QIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSM 382
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMF 465
I GY Q+G +AL L+ M I P +T SVL AC+ + +G Q + +K F
Sbjct: 383 IGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGF 442
Query: 466 GFE-PEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G E P G S M + G L D + MP
Sbjct: 443 GLEVPIGSALSTM---YAKCGCLKDGTLVFRRMP 473
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 161/349 (46%), Gaps = 36/349 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL + GK +H + +KN + + N + +Y+KCG L A F +
Sbjct: 211 VFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETS 270
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N + ++ +I+ YA GD++ AL LF
Sbjct: 271 SDKNSIT-------------------------------WSAMITGYAQSGDSDKALKLFS 299
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M FT G+I A S+ KQ+H + GF+ V +L+ Y++
Sbjct: 300 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A++ F + E D V W SM+ Y Q+ E +AL L+ M + + T+AS+L
Sbjct: 360 SIVDARKGFDYLQE-PDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVL 418
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A +SL L G Q HA +K GF IGS L +YAKC G ++D VF +P D+
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC-GCLKDGTLVFRRMPARDV 477
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+ WN MISG SQ +AL F+++ G PD +FV ++SACS++
Sbjct: 478 ISWNAMISGLSQN-GCGKEALELFEEMQLEGTKPDYVTFVNILSACSHM 525
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 141/334 (42%), Gaps = 62/334 (18%)
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
F ++ N S GK +HA IK S+ + + N+LV +Y+KC L +A+ +F+R+
Sbjct: 10 FTALLQYTHNRSLQKGKALHAQIIKSS--SSCVYIANSLVNLYAKCQRLREAKFVFERIQ 67
Query: 397 EHNTVSLNSMIAGYAQHGIGMEA--LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ VS N +I GY+QHG + + LF+ M N P TF V +A + A G
Sbjct: 68 NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGG 127
Query: 455 QKYFSMM------KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ ++ +D+F S ++++ +AG +A ++ + MP
Sbjct: 128 RLAHAVAIKMDSCRDVF-------VGSSLMNMYCKAGLTPEARKVFDTMP---------- 170
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV------ 562
N+V + + + YA+ E + RLMR R + + F + V
Sbjct: 171 --------ERNSVSWATMISGYASQKLAAEALGLFRLMR-REEEGENEFVFTSVLSALTL 221
Query: 563 ------KKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVA 616
KQ+H ++G ++ + N L M K G + D + S+K ++
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVS-VGNALVTMYAK---CGSLDDALQTFETSSDKNSIT 277
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+ + T Y + GD A+K S++
Sbjct: 278 WSAMITGYAQS----------GDSDKALKLFSSM 301
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C L GK +HA +K + + +Y+KCGCL F +
Sbjct: 413 TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +++ ++ A +LF+++ +PD V++ ++SA + G E
Sbjct: 473 PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGW 532
Query: 117 SLFKDM 122
F+ M
Sbjct: 533 GYFRMM 538
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/727 (33%), Positives = 373/727 (51%), Gaps = 89/727 (12%)
Query: 1 TFRQVLKTCV--GRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF VL +CV G L +++H + + A++ + Y K G L A F
Sbjct: 248 TFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF- 306
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
LR D+ P LV+ + +ISA G + +L L
Sbjct: 307 --------------------LRKG------DEEPSTSLVTCSAMISACWQNGWPQESLRL 340
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN--------NSL 170
F M + +G SG+ S N C + Q+ + V+ +L
Sbjct: 341 FFAM-----NLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTL 395
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
LT Y+R+ L A+ F + + D VSWN+M AY QH EAL LF+ M+ +
Sbjct: 396 LTTYARSNDLPRARATFDAI-QSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPS 454
Query: 231 MYTLASILTAFTSLEDLVG---GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T + LTA + G + + L ++G ++ + + +++YAKC G + D
Sbjct: 455 VATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC-GSLADAR 513
Query: 288 KVFEEI--PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISA- 343
VFE I + D + WN+M++ Y +A F+ + P+ +FV V+ A
Sbjct: 514 AVFERISPARRDCITWNSMLAAYGH-HGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDAS 572
Query: 344 CSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTV 401
S S + G++IHA + S+ + + NAL+ MY+KCG+L+DA+ +FD+ + + +
Sbjct: 573 TSRTSIAQGREIHARVVSNGFESDTV-IQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVI 631
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ S+IAGYAQ+G AL+LF M + + P ++TF+S L+AC H GK+ +G + S M
Sbjct: 632 AWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGM 691
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE-------------------AMPFNPG 502
G P +H+SC++DLLGR G+L +AE+L+E + G
Sbjct: 692 TPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKNSKELERG 751
Query: 503 SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
+ A +QL+P A Y++LA++YAA+G+W E ATIR+ M D+G++ PG S +EV
Sbjct: 752 E---RCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEV 808
Query: 563 KKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHS 610
+++H F A D SHP +EI+ LE + +K AGYV D KE+ L+ HS
Sbjct: 809 NQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHS 868
Query: 611 EKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
EKLA+AFGL+ST G P+ V+KNLR+C DCH A K IS + GR+I +RD+ R+H F G
Sbjct: 869 EKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGT 928
Query: 671 CSCGDYW 677
CSCGDYW
Sbjct: 929 CSCGDYW 935
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 239/520 (45%), Gaps = 72/520 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFS--AYLSNHFILLYSKCGCLSAAHHAFN 58
T+ +L+ C R L G+ LHA L + ++L++ I++++KCG L+ A +
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALS 117
+ A+V+S ++ A+ R A +LFD++ +P+ + L++A + G
Sbjct: 105 R--FASVYSCTAMIRAWMEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLG------- 155
Query: 118 LFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
NL +++H F+ + + N+L++ YS+
Sbjct: 156 --------------------------NLAAGRRIHSQISDRDFEENSVLGNALISMYSKC 189
Query: 178 GFLDEAKRVFYEM--GEIKDEVSWNSMVVAYGQHREGLEALQLFQEM----------VSL 225
G L +AK+ F + +D V+WN+M+ A+ ++ EALQLF++M V+
Sbjct: 190 GSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTF 249
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
LD A +L SLED+ H ++ +G + + + + L+D Y K G + D
Sbjct: 250 VSVLDSCVEAGLL----SLEDVRA---IHGRIVGAGIEREAFVRTALVDSYGKL-GSLDD 301
Query: 286 CMKVF----EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
+VF +E P LV + MIS Q + ++L F +N G P + V V+
Sbjct: 302 AWEVFLRKGDEEPSTSLVTCSAMISACWQN-GWPQESLRLFFAMNLEGTKPSGVTLVSVL 360
Query: 342 SACSNLSPSLGKQI---HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+ACS L A+ + R N + L+ Y++ +L AR FD +
Sbjct: 361 NACSMLQVGSATAFVLEQAMEVVSATRDNVLGTT--LLTTYARSNDLPRARATFDAIQSP 418
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH---TGKVAEGQ 455
+ VS N+M A Y QH EAL LFE ML + P+ TF++ L+ACA A G+
Sbjct: 419 DVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGK 478
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ S++++ G E + + +++ + G L DA + E
Sbjct: 479 RIQSLLEEA-GLEGDTAVANATLNMYAKCGSLADARAVFE 517
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 349/617 (56%), Gaps = 42/617 (6%)
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
+S N LI + G + A+ + +E + L L ++L ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLS--QESSPSQQTYELLILCCGHRSSLSDALRVHRHIL 104
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G D + L+ YS G +D A++VF + + WN++ A G E L
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVF-DKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLE----DLVGGLQFHAHLIKSGFHQNSHIGSGL 272
L+ +M + + D +T +L A + E L+ G + HAHL + G+ + +I + L
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR--VGY 330
+D+YA+ G + VF +P ++V W+ MI+ Y+ K + +AL F+++ R
Sbjct: 224 VDMYARF-GCVDYASYVFGGMPVRNVVSWSAMIACYA-KNGKAFEALRTFREMMRETKDS 281
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ + V V+ AC++L+ GK IH ++ + S + V +ALV MY +CG LE +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI-LPVISALVTMYGRCGKLEVGQ 340
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
R+FDRM + + VS NS+I+ Y HG G +A+++FE ML PT +TFVSVL AC+H G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG------- 502
V EG++ F M G +P+ EHY+CM+DLLGRA +L +A ++++ M PG
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 503 ----------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+A +A+ LEP NA YV+LA+IYA + W+EV +++L+ RG+Q
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------ 600
K PG W+EV+++M+ FV+ D +P++++IH +L +++ MK+ GY+P
Sbjct: 521 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 580
Query: 601 DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+KE+ ++ HSEKLA+AFGL++TS GEPI + KNLR+C DCH KFIS +EI VRD
Sbjct: 581 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 640
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FK+G CSCGDYW
Sbjct: 641 NRFHRFKNGVCSCGDYW 657
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 139/316 (43%), Gaps = 45/316 (14%)
Query: 1 TFRQVLKTCVGRR----DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T+ VLK CV L+ GK +HA + Y+ + +Y++ GC+ A +
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F NV S++ ++A YA+ G AL
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKN-------------------------------GKAFEAL 268
Query: 117 SLFKDMREKRFDT--DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLT 172
F++M + D+ + T+ ++ A ++ L K +H + G D V ++L+T
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y R G L+ +RVF M + +D VSWNS++ +YG H G +A+Q+F+EM++
Sbjct: 329 MYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387
Query: 233 TLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T S+L A S E LV G F G + ++DL + + + + K+
Sbjct: 388 TFVSVLGA-CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR-ANRLDEAAKMV 445
Query: 291 EEI-PQPDLVLWNTMI 305
+++ +P +W +++
Sbjct: 446 QDMRTEPGPKVWGSLL 461
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/712 (32%), Positives = 375/712 (52%), Gaps = 74/712 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C D+ TGK++HA+ + + +LSN +Y++CG
Sbjct: 104 TYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCG------------ 151
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD + D VS+N L+S Y G E L +F
Sbjct: 152 -------------------EMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFS 192
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC-----------LIKQLHCLAIYCGFDHYASVNNS 169
M + F L +I +++ + + +H + G D + ++
Sbjct: 193 LMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASA 252
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG---LEALQLFQEMVSLQ 226
++ Y++ G L A +F + + + + N+M+ + + EAL L+ E+ S
Sbjct: 253 MIDMYAKRGALTNAVALFKSVPD-PNVIVLNAMIAGFCREEAADVAREALGLYSELQSRG 311
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ ++ +SIL A + G Q H ++K F + +IGS LIDLY+ SG M D
Sbjct: 312 MQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSG-SGCMEDG 370
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+ F +P+ D+V+W ++ISG Q E + ++AL F++ R G PD + V++AC++
Sbjct: 371 YRCFRSLPKQDVVIWTSVISGCVQNELF-EEALRLFQESVRCGLRPDVFAMSSVMNACAS 429
Query: 347 LSPS-LGKQIHALTIKIEIRSNRIS-VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ + G+QI L +K NR + + N+ + M ++ G+++ A R F M + VS +
Sbjct: 430 LAVARTGEQIQCLAVKSGF--NRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWS 487
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNI-PPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
++I+ +A HG +AL +F ML+ + PP ITF+S+L+AC+H G V EG +Y+ +M D
Sbjct: 488 AVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMND 547
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA--------------- 508
+G P +H +C++DLLGRAG+L DAE I F+ ++ ++
Sbjct: 548 EYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQ 607
Query: 509 --ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
A+ + LEP+++ YV+L N+Y +G+ + R LM++RGV+K+PG SWIE+ +
Sbjct: 608 LVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGV 667
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH-HSEKLAVAFGLLSTSYG 625
H FVA D SHP K I+ + EM K+ AG + +E+ L HSEKLAVAFG++
Sbjct: 668 HSFVAGDKSHPESKAIYRKVAEMVSKV--AG-ISSREQDLAGCHSEKLAVAFGMIHLPQS 724
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCH+ ++ IS REI +RD RFH F+DG CSCG YW
Sbjct: 725 APIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFRDGSCSCGGYW 776
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 247/480 (51%), Gaps = 28/480 (5%)
Query: 40 FILLYSKCGCLS--AAHHAFNQTQHAN--VFSFNVLLAAYARQLRIAS---ARQLFDQIP 92
++ L C L AA HA H N +F N LLA+Y R L + + A +L D++P
Sbjct: 5 YLHLLRSCAALPHVAAVHAHLARAHPNASLFLRNCLLASYCR-LGVGAPLHAARLLDEMP 63
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQ 150
+ + VSYN +I AY+ G +L+ F R D FT + + A S L + K
Sbjct: 64 RRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKA 123
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+H + + G + ++NS+ + Y+R G + EA+RVF + E +D+VSWN+++ Y +
Sbjct: 124 VHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVF-DAAEERDDVSWNALLSGYVRAG 182
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASIL------TAFTSLEDLVGGL---QFHAHLIKSG 261
E L++F M LG + + L SI+ +++ + D+ GG H ++K+G
Sbjct: 183 AREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAG 242
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE--EYSDQAL 319
+ + S +ID+YAK G + + + +F+ +P P++++ N MI+G+ ++E + + +AL
Sbjct: 243 LDADLFLASAMIDMYAK-RGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREAL 301
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP--SLGKQIHALTIKIEIRSNRISVNNALVA 377
G + +L G P + SF ++ AC NL+ GKQIH +K + + + + +AL+
Sbjct: 302 GLYSELQSRGMQPSEFSFSSILRAC-NLAGEFGFGKQIHGQVLKHSFQGD-VYIGSALID 359
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
+YS G +ED R F +P+ + V S+I+G Q+ + EALRLF+ + + P
Sbjct: 360 LYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFA 419
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
SV++ACA G++ + GF + I + R+G + A R + M
Sbjct: 420 MSSVMNACASLAVARTGEQ-IQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEM 478
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 19/268 (7%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HAHL ++ + + + + L+ Y + G ++ +E+P+ + V +N +I YS +
Sbjct: 22 HAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYS-RA 80
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISV 371
+L F + D ++ ++ACS L GK +HA+ + + + + +
Sbjct: 81 GLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNG-LFL 139
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+N++ +MY++CG + +ARR+FD E + VS N++++GY + G E L +F M +
Sbjct: 140 SNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGL 199
Query: 432 PPTNITFVSVLSACAHT-----------GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+ S++ CA + G++AE + ++K G + + S MID+
Sbjct: 200 GWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAV-HGCVVKA--GLDADLFLASAMIDM 256
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ G LT+A L +++P +P I L A
Sbjct: 257 YAKRGALTNAVALFKSVP-DPNVIVLNA 283
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 339/602 (56%), Gaps = 41/602 (6%)
Query: 43 LYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
++ C LSA+ HA ++V L YA+ ++ A +LF +P +
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK------ 149
L SYN +I YA A LF +++ F D +LSG ++A++ +IK
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAA----VIKGHSEGL 379
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLH LAI V N++L Y + G L EA +F EM EI+D VSWN+++ A Q+
Sbjct: 380 QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM-EIRDPVSWNAIITACEQN 438
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+ L F M+ ++ D +T S+L A G++ H +IKSG +G
Sbjct: 439 ESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG 498
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS-QKEEYSDQALGCFKKLNRV 328
S L+D+Y+KC G M + K+ + + +V WN +ISG+S QK+ Q F + +
Sbjct: 499 SALVDMYSKC-GMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRF--FSHMLEM 555
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD+ ++ V+ C+NL+ LGKQIHA IK+E+ S+ + + + LV MYSKCGN+ D
Sbjct: 556 GVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSD-VYITSTLVDMYSKCGNMHD 614
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ +F + P+ ++V+ N+MI G+A HG+G EAL LFE ML NI P + TFVSVL AC+H
Sbjct: 615 SLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSH 674
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI--- 504
G +G YF M ++ EP+ EHYSCM+D+LGR+G++ +A RLI+ MPF +I
Sbjct: 675 VGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWR 734
Query: 505 --------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
A KAA+ L+L+P ++ Y +L+NIYA +G W++V+ IR+ MR
Sbjct: 735 TLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHN 794
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHS 610
++K+PG SWIEVK ++H F+ D +HP + I++ L+ + M+++G P+ + V
Sbjct: 795 LKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEV 854
Query: 611 EK 612
E+
Sbjct: 855 EE 856
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 260/509 (51%), Gaps = 33/509 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF + + C RR L GK HA + L P + +++N I +Y KC L A+ F +
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTP-TVFVTNCLIQMYVKCCALEYAYKVFEE 84
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSL 118
++ S+N ++ A R+ A+ +F+ +P D+VS+N+LIS Y GD + ++++
Sbjct: 85 MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144
Query: 119 FKDMRE--KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ FD +S I + + L Q+H +A+ GFD+ ++L+ Y++
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
L+++ VF E+ + K+ +SW++ + Q+ + L L+LF+EM +G+ T AS
Sbjct: 205 CNSLEDSLDVFSELPD-KNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ + L G Q H H +K+ F + +G+ +D+YAKC +M D K+F +P
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCD-NMSDAYKLFSLLPDH 322
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+L +N MI GY++ E+ QA F +L + + D+ S +SA + + S G Q+
Sbjct: 323 NLQSYNAMIIGYARNEQ-GFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H L IK + SN I V NA++ MY KCG L +A LFD M + VS N++I Q+
Sbjct: 382 HGLAIKSNLSSN-ICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY- 474
+ L F ML + + P T+ SVL ACA GQ+ FS G E G
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACA-------GQRAFSN-----GMEVHGRIIK 488
Query: 475 ----------SCMIDLLGRAGKLTDAERL 493
S ++D+ + G + +AE++
Sbjct: 489 SGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 192/383 (50%), Gaps = 32/383 (8%)
Query: 131 GFTLSGLITASSNNLCLIKQ-LHCLAIYCGFDHY--------ASVNNSLLTCYSRNGFLD 181
GFT + +T CLI+ + C A+ + + S N + C + G ++
Sbjct: 54 GFTPTVFVTN-----CLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGC-AGAGRME 107
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+ VF M D VSWNS++ Y Q+ + +++ +F +M L + D TLA L
Sbjct: 108 LAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKIC 167
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ LED V G+Q H ++ GF + GS L+D+YAKC+ + D + VF E+P + + W
Sbjct: 168 SLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNS-LEDSLDVFSELPDKNWISW 226
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTI 360
+ I+G Q ++ + L FK++ R G ++ V +C+ LS S LG Q+H +
Sbjct: 227 SAAIAGCVQNDQLL-RGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHAL 285
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K + S+ I V A + MY+KC N+ DA +LF +P+HN S N+MI GYA++ G +A
Sbjct: 286 KTDFGSDVI-VGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAF 344
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS----- 475
+LF + + + ++ LSA A +EG + + G + S
Sbjct: 345 KLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ-------LHGLAIKSNLSSNICVA 397
Query: 476 -CMIDLLGRAGKLTDAERLIEAM 497
++D+ G+ G L +A L + M
Sbjct: 398 NAILDMYGKCGALVEASGLFDEM 420
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 169/376 (44%), Gaps = 49/376 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C G+R G +H +K+ + ++ + + +YSKCG + A +
Sbjct: 462 TYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL 521
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S+N +++ ++ Q + +E + F
Sbjct: 522 EEQTMVSWNAIISGFSLQKK-------------------------------SEDSQRFFS 550
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E + D FT + ++ +N + L KQ+H I + ++L+ YS+ G
Sbjct: 551 HMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCG 610
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++ +F + + +D V+WN+M+ + H G EAL+LF+ M+ + + T S+L
Sbjct: 611 NMHDSLLMFRKAPK-RDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVL 669
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + + GL F+ + S + + S ++D+ + SG + + +++ +++P +
Sbjct: 670 RACSHVGNAKKGL-FYFQKMASIYALEPQLEHYSCMVDILGR-SGQVEEALRLIQDMPFE 727
Query: 296 PDLVLWNTMIS--GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
D ++W T++S E +++A KL+ P+D S ++ SN+ G
Sbjct: 728 ADAIIWRTLLSICKIQGNVEVAEKAASSLLKLD-----PEDSSAYTLL---SNIYADAGM 779
Query: 354 QIHALTIKIEIRSNRI 369
I+ +RS+ +
Sbjct: 780 WQQVSKIRQTMRSHNL 795
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/629 (37%), Positives = 339/629 (53%), Gaps = 78/629 (12%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFDTDGFTLSGLITASS 142
AR+LF P PD+ +NTLI A+ +++L F +MR + D F+ + L+ A++
Sbjct: 58 ARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAA 117
Query: 143 NNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+ L QLHC AI G D + V +L++ YS GF+ AK+VF EM E + V+WN
Sbjct: 118 SYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFE-PNVVAWN 176
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
++V A + + A +F M L TS ++ G
Sbjct: 177 AVVTACFRCGDVKGADMMFNRMPFRNL--------------TSWNVMLAG---------- 212
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
Y K +G++ K+F E+P D V W+TMI G++ + +A G
Sbjct: 213 ---------------YTK-AGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFY-EAFG 255
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F++L +VG P++ S +SAC++ GK +H K +SVNNAL+ Y
Sbjct: 256 FFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLW-MVSVNNALLDTY 314
Query: 380 SKCGNLEDARRLFDRMPEHNT-VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
SKCGN+ AR +F+RMPE + VS SMIAG A HG G EA++LF M E+ I P I F
Sbjct: 315 SKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAF 374
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+S+L AC+H G + +G +YF MKD++ EP EHY CM+DL GRAG+L A I MP
Sbjct: 375 ISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMP 434
Query: 499 FNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P +I A + +L+P+N+ +V+L+NIYA +GKW++VA
Sbjct: 435 VLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAA 494
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG-YVP 600
+RR M D+ + K PG+S IEV K M+ FVA + + + +E + L+E+ K++ G Y+P
Sbjct: 495 VRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIP 554
Query: 601 ------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+KE + HSEKLAVAFG+ G I ++KNLR+C DCH +K IS
Sbjct: 555 EVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLIS 614
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G EI VRD RFH FK G CSC DYW
Sbjct: 615 KVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 34/307 (11%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
K ++ N+V ++A ++ F +CG + A FN+ N+ S+NV+LA Y +
Sbjct: 162 KVFEEMFEPNVVAWNAVVTACF-----RCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKA 216
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI 138
+ AR+LF ++P D VS++T+I +A G A F+++++ + +L+G +
Sbjct: 217 GELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGAL 276
Query: 139 TASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
+A ++ + K LH GF SVNN+LL YS+ G + A+ VF M E +
Sbjct: 277 SACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSI 336
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
VSW SM+ H G EA+QLF EM + D SIL A + HA
Sbjct: 337 VSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACS-----------HAG 385
Query: 257 LIKSGFH-------------QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVLWN 302
LI+ G+ H G ++DLY + +G + + +P P ++W
Sbjct: 386 LIEKGYEYFYKMKDIYNIEPAIEHYGC-MVDLYGR-AGQLDKAYEFIIHMPVLPTAIIWR 443
Query: 303 TMISGYS 309
T++ S
Sbjct: 444 TLLGACS 450
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 69/328 (21%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMKVFEEI 293
+S+LT SL++L Q HA++ K+G + I L+ A D D ++F
Sbjct: 9 SSLLTNCRSLKNLK---QVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHF 65
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLG 352
P PD+ + NT+I G ++ + + + + R+ D SF ++ +A S S G
Sbjct: 66 PNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESG 125
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYS-------------------------------K 381
Q+H I + + V LV+MYS +
Sbjct: 126 IQLHCQAI-VHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFR 184
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGY------------------------------- 410
CG+++ A +F+RMP N S N M+AGY
Sbjct: 185 CGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGF 244
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A +G EA F + + + P ++ LSACA G + G+ ++ GF
Sbjct: 245 AHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKS-GFLWM 303
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++D + G + A + E MP
Sbjct: 304 VSVNNALLDTYSKCGNVGMARLVFERMP 331
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
N LL Y++ + AR +F+++P+ +VS+ ++I+ A G E A+ LF +M E
Sbjct: 308 NALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGI 367
Query: 128 DTDGFTL---------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DG +GLI +K ++ I +HY ++ Y R G
Sbjct: 368 RPDGIAFISILYACSHAGLIEKGYEYFYKMKDIY--NIEPAIEHYGC----MVDLYGRAG 421
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
LD+A M + + W +++ A H
Sbjct: 422 QLDKAYEFIIHMPVLPTAIIWRTLLGACSIH 452
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/601 (37%), Positives = 329/601 (54%), Gaps = 43/601 (7%)
Query: 111 DTESALSLFKDMR--EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN 168
DT + L ++ ++ E ++ T G S T + + +K+ H G + + +
Sbjct: 700 DTGAVLQFWQRIKATESKYKTIG---SAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILT 756
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVS--WNSMVVAYGQHREGLEALQLFQEMVSLQ 226
Y +D A VF + I + S WN M+ + L +L+L+ +M+
Sbjct: 757 KFAIMYVSFNRIDAASIVFED---IPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKG 813
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
L D + L + L DL G H HL+ G + + + L+D+YAKC GD+
Sbjct: 814 LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC-GDIEAA 872
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
VF+++ DLV W +MISGY+ Y+ + LG F + G P+ S + V+ AC N
Sbjct: 873 RLVFDKMAVRDLVSWTSMISGYAHNG-YNSETLGFFDLMRSSGVIPNRVSILSVLLACGN 931
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L G+ H+ I+ + I V A++ MYSKCG+L+ AR LFD + V ++
Sbjct: 932 LGALRKGEWFHSYVIQTGFEFD-ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSA 990
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MIA Y HG G +A+ LF+ M++ + P+++TF VLSAC+H+G + EG+ YF +M + F
Sbjct: 991 MIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEF 1050
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKA 508
+ +Y+CM+DLLGRAG+L++A LIE MP P + +A K
Sbjct: 1051 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKI 1110
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A+H L+P +A +V+L+NIYAA +W EV +R++M RG K GFS +E Q+H
Sbjct: 1111 ADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHK 1170
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVA 616
F D SHP ++++ LEE++ MK GYVP KE L +HSE+LA+A
Sbjct: 1171 FGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIA 1230
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL++TS G + + KNLRICGDCHNAIK IS I R I VRD +RFH F+DG CSCGDY
Sbjct: 1231 FGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDY 1290
Query: 677 W 677
W
Sbjct: 1291 W 1291
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 199/626 (31%), Positives = 320/626 (51%), Gaps = 62/626 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T LK C G R L GK +H KN + ++ + + LYSKCG
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCG----------- 153
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
++ A ++F++ +PD V + ++++ Y D E AL+LF
Sbjct: 154 --------------------QMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF 193
Query: 120 KDMREKR-FDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M D TL +++A + N+ +H L I FD + NSLL Y++
Sbjct: 194 SQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAK 253
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G A +F +M E KD +SW++M+ Y + EAL LF EM+ + + T+ S
Sbjct: 254 TGCEKIAANLFSKMPE-KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVS 312
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L A +L G + H + GF + + + LID+Y KCS + + +F+ +P+
Sbjct: 313 ALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP-DEAVDLFQRLPKK 371
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ-- 354
D+V W ++SGY+Q + +++G F+ + G PD + V +++A S L + +Q
Sbjct: 372 DVVSWVALLSGYAQNG-MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG--IFQQAL 428
Query: 355 -IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+H ++ SN + V +L+ +YSKCG+L DA +LF M + V +SMIA Y H
Sbjct: 429 CLHGYVVRSGFNSN-VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIH 487
Query: 414 GIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G EAL +F+ M++ + + P N+TF+S+LSAC+H G V EG K F M + P+ E
Sbjct: 488 GRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSE 547
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQL 515
H+ M+DLLGR G+L A +I MP G + AA + L
Sbjct: 548 HFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWL 607
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+PS+A Y++L+NIYA GKW+ VA +R +++RG++K G S +EV+ +H F+A D
Sbjct: 608 DPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRF 667
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD 601
HP ++I+ L ++ +M + Y+PD
Sbjct: 668 HPDSQKIYELLRKLEAQMGKEVYIPD 693
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 231/443 (52%), Gaps = 17/443 (3%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ F L + YA+ + +AR++FD+ P P++ +N+ + +Y E L LF M
Sbjct: 35 DTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMI 94
Query: 124 EKRFDT-DGFTLSGLITASSN--NLCLIKQLHCLAIY---CGFDHYASVNNSLLTCYSRN 177
+ D FT+ + A + L L K +H A G D + V ++L+ YS+
Sbjct: 95 CTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF--VGSALVELYSKC 152
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLAS 236
G + EA +VF E + D V W SMV Y Q+ + EAL LF +MV + + LD TL S
Sbjct: 153 GQMGEALKVFEEF-QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVS 211
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+++A L ++ G H +I+ F + + + L++LYAK +G + +F ++P+
Sbjct: 212 VVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAK-TGCEKIAANLFSKMPEK 270
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQ 354
D++ W+TMI+ Y+ E +++AL F ++ + P+ + V + AC+ +S +L GK+
Sbjct: 271 DVISWSTMIACYANNEA-ANEALNLFHEMIEKRFEPNSVTVVSALQACA-VSRNLEEGKK 328
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH + + + SV+ AL+ MY KC ++A LF R+P+ + VS ++++GYAQ+G
Sbjct: 329 IHKIAVWKGFELD-FSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNG 387
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ +++ +F ML I P + V +L+A + G + + GF
Sbjct: 388 MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVG 446
Query: 475 SCMIDLLGRAGKLTDAERLIEAM 497
+ +I+L + G L DA +L + M
Sbjct: 447 ASLIELYSKCGSLGDAVKLFKGM 469
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 208/435 (47%), Gaps = 34/435 (7%)
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
MR ++ D F + NN + QLH G H L + Y++ L
Sbjct: 1 MRSRQVLVDLFQ-------ACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQ 53
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTA 240
A++VF E + WNS + +Y + ++ E L+LF M+ + D +T+ L A
Sbjct: 54 AARKVFDETPHPNVHL-WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKA 112
Query: 241 FTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
L L G H K+ + +GS L++LY+KC G M + +KVFEE +PD V
Sbjct: 113 CAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC-GQMGEALKVFEEFQRPDTV 171
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN-LSPSLGKQIHA 357
LW +M++GY Q + ++AL F ++ + D + V V+SAC+ L+ G +H
Sbjct: 172 LWTSMVTGYQQNND-PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHG 230
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L I+ E + + + N+L+ +Y+K G + A LF +MPE + +S ++MIA YA +
Sbjct: 231 LVIRREFDGD-LPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 289
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF M+E P ++T VS L ACA + + EG+K + GFE + + +
Sbjct: 290 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV-WKGFELDFSVSTAL 348
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
ID+ + S +A + F +L + V +V L + YA +G
Sbjct: 349 IDMYMKC------------------SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAY 390
Query: 538 EVATIRRLMRDRGVQ 552
+ + R M G+Q
Sbjct: 391 KSMGVFRNMLSDGIQ 405
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 39/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F LK+C G DL GK +H H + CGC +
Sbjct: 820 AFPFALKSCAGLSDLQRGKVIH---------------QHLVC----CGCSN--------- 851
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F L+ YA+ I +AR +FD++ DLVS+ ++IS YA G L F
Sbjct: 852 ---DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFD 908
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + ++ ++ A N L K H I GF+ V +++ YS+ G
Sbjct: 909 LMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 968
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD A+ +F E KD V W++M+ +YG H G +A+ LF +MV + T +L
Sbjct: 969 SLDLARCLFDETAG-KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVL 1027
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S L+ + + L+ F + + ++DL + +G + + + + E +P +
Sbjct: 1028 SA-CSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGR-AGQLSEAVDLIENMPVE 1085
Query: 296 PDLVLWNTMI 305
PD +W +++
Sbjct: 1086 PDASIWGSLL 1095
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 338/626 (53%), Gaps = 37/626 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A + F ++ +PD++ +N +I Y ++ + ++ DM+ + + FT ++ A
Sbjct: 53 AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG 112
Query: 144 NLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ KQ+H GF V NSL++ Y++ G + A+ VF ++ + + VSW S
Sbjct: 113 TSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD-RTVVSWTS 171
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ Y Q+ + +EAL +F+EM + D L S++TA+T++EDL G H + K G
Sbjct: 172 IISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLG 231
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
I L +YAK G + F + +P+L+LWN MISGY+ Y ++A+
Sbjct: 232 LEFEPDIVISLTTMYAK-RGLVEVARFFFNRMEKPNLILWNAMISGYANNG-YGEEAIKL 289
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F+++ D + + A + + S L + + K E R + VN L+ MY+
Sbjct: 290 FREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF-VNTGLIDMYA 348
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG++ AR +FDR+ + + V + MI GY HG G EA+ L+ M + + P + TF+
Sbjct: 349 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 408
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
+L+AC ++G V EG + F +M D G EP +HYSC++DLLGRAG L A I +MP
Sbjct: 409 LLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 467
Query: 501 PG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
PG + AA L+P N YV L+N+YA++ W VA +R
Sbjct: 468 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVR 527
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--- 600
+M +G+ K G S IE+ + F D SHP KEI L+ + +++K AGYVP
Sbjct: 528 LMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHME 587
Query: 601 ---------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
+ E+ L HHSE+LAVA+G++ST+ G + + KNLR C +CH+AIK IS +
Sbjct: 588 SVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLV 647
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD RFH FKDG CSCGD+W
Sbjct: 648 DREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 27/304 (8%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKC--SGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
Q + LI SG H+ + +I C GD+ K F E+ +PD++LWN +I GY+
Sbjct: 20 QVYVQLIVSGLHKCRFL---MIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 76
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNR 368
QK D + + + HP+ +F+ V+ AC S +GKQIH T K SN
Sbjct: 77 QK-NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN- 134
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V N+LV+MY+K G + AR +FD++ + VS S+I+GY Q+G MEAL +F+ M +
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
N+ P I VSV++A + + +G+ ++ + G E E + + + + G
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKL-GLEFEPDIVISLTTMYAKRG--- 250
Query: 489 DAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
L+E F F ++E N + + + + YA +G EE + R M
Sbjct: 251 ----LVEVARF-----------FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 295
Query: 549 RGVQ 552
+ ++
Sbjct: 296 KNIR 299
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ YA+ I AR +FD++ D+V ++ +I Y G + A+ L+ +M++ +
Sbjct: 343 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 402
Query: 131 GFTLSGLITASSNNLCLIKQ----LHCL---AIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
T GL+TA N+ L+K+ H + I HY+ V + L R G+L++A
Sbjct: 403 DGTFIGLLTACKNS-GLVKEGWELFHLMPDHGIEPHHQHYSCVVDLL----GRAGYLNQA 457
Query: 184 KRVFYEMGEIKDEVS-WNSMVVAYGQHRE----GLEALQLF 219
M IK VS W +++ A HR+ + A QLF
Sbjct: 458 YDFIMSM-PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLF 497
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 243/713 (34%), Positives = 357/713 (50%), Gaps = 73/713 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL C L G+ +H ++ + +++ + +Y +CG L A
Sbjct: 130 VFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA------- 182
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N L R L D+V +N +I+A + G AL +F
Sbjct: 183 --------NALFGHLERHL---------------DVVLWNAMITANSQNGSPREALEIFY 219
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL----IKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + D T + A S++ L +K H G V +L+ Y+R
Sbjct: 220 RMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYAR 279
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D A++ F EM E ++ VSW SM+ A+ Q L A++ F M+ L + T ++
Sbjct: 280 CGEIDCARKFFAEMPE-RNAVSWTSMIAAFTQIGH-LLAVETFHAML---LEGVVPTRST 334
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF--EEIP 294
+ A EDL A + G + I + L+ YA+C G D ++VF E
Sbjct: 335 LFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQ-EDAIRVFSAREEG 393
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ D L MI+ Y+Q + + R G PD ++ + AC++L+ S G+
Sbjct: 394 EWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER-GISPDRILYITALDACASLAALSEGR 452
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIHA +++ NA+V+MY +CG+L DAR FD MP + +S N+M++ AQH
Sbjct: 453 QIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQH 512
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G + LF ML+ I F+++LSACAH G V G ++FS M G P EH
Sbjct: 513 GRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEH 572
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS---IALK--------------AANHFLQLE 516
Y CM+DLLGR G+L DA +++AMP P + +AL AA L+L
Sbjct: 573 YGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELR 632
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
+ YV L NIY+A+G+W++ A +R++M D G++K PG S IE++ ++H FV D SH
Sbjct: 633 ADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSH 692
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSY 624
P + I+ LE + +++AGY KE+ L HSEKLA+AFG++ST
Sbjct: 693 PQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQ 752
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V+KNLR+C DCHNA KFIS + GREI VRD RFH FKDG CSCGDYW
Sbjct: 753 GSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 210/436 (48%), Gaps = 16/436 (3%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y R + SA +F +I +V + LISAY G + +A++LF + ++ D
Sbjct: 68 LVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALD 127
Query: 131 GFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+++A S+ L + +H A+ G V ++L++ Y R G L +A +F
Sbjct: 128 AIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFG 187
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL- 247
+ D V WN+M+ A Q+ EAL++F M+ L + D+ T S+ A +S L
Sbjct: 188 HLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLR 247
Query: 248 ---VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
V G FHA L ++G + + + L++ YA+C G++ K F E+P+ + V W +M
Sbjct: 248 ASQVKG--FHACLDETGLGSDVVVATALVNAYARC-GEIDCARKFFAEMPERNAVSWTSM 304
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
I+ ++Q A+ F + G P + + C +L + + + A+ +I +
Sbjct: 305 IAAFTQIGHL--LAVETFHAMLLEGVVPTRSTLFAALEGCEDL--RVARLVEAIAQEIGV 360
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH--NTVSLNSMIAGYAQHGIGMEALRL 422
++ +++ LV Y++C EDA R+F E + + +MIA YAQ +L
Sbjct: 361 VTD-VAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKL 419
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
+ +E I P I +++ L ACA ++EG++ + + + + + ++ + G
Sbjct: 420 WGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYG 479
Query: 483 RAGKLTDAERLIEAMP 498
+ G L DA + MP
Sbjct: 480 QCGSLRDARDAFDGMP 495
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 333 DDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + V ++ C++++ GK +H+ S + ++LV MY +CG+LE A +F
Sbjct: 28 DSAAAVRLVRECNSIAR--GKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVF 85
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
++ + V +I+ Y G A+ LF +L+ I I FVSVLSAC+ +A
Sbjct: 86 HKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLA 145
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
G+ + G + S ++ + GR G L DA L
Sbjct: 146 AGRLIHRCAVEA-GLGLQEIVASALVSMYGRCGSLRDANAL 185
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/657 (36%), Positives = 347/657 (52%), Gaps = 77/657 (11%)
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--N 143
+LF+ I P +++ ++I Y G +L F M D ++ + +
Sbjct: 61 RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR-------VFYEMGEI--- 193
+L L + LH I G D N+L+ YS+ FL+E+ R VF EM E
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 194 ---------------------KDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLD 230
KD VSWN+++ G R GL E L++ +EM L D
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIA--GNARNGLYEETLRMIREMGGANLKPD 238
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+TL+S+L D+ G + H I+ G + ++ S LID+YAKC+ + D +VF
Sbjct: 239 SFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT-RVADSCRVF 297
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ + D + WN++I+G Q + D+ L F+++ P SF ++ AC++L+
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLF-DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTL 356
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
LGKQ+H + N I + ++LV MY+KCGN+ A+++FDRM + VS +MI G
Sbjct: 357 HLGKQLHGYITRNGFDEN-IFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
A HG +A+ LFE M I +VL+AC+H G V E KYF+ M FG P
Sbjct: 416 CALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAP 468
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHF 512
EHY+ + DLLGRAG+L +A I M P GSI A K AN
Sbjct: 469 GVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRI 528
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+++P+N Y++LANIY+A+ +W+E A R MR G++K P SWIEVK +++ F+A
Sbjct: 529 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAG 588
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD-----------KEKRLV-HHSEKLAVAFGLL 620
D SHP ++I +E + M++ GYVPD ++K LV HSE+LA+ FG++
Sbjct: 589 DESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII 648
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+T G I V KNLR+C DCH A KFIS I GREI VRD RFH FK+G CSCGDYW
Sbjct: 649 NTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 175/356 (49%), Gaps = 36/356 (10%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YS L ++ R+F + ++W S++ Y H ++L F M++ L D
Sbjct: 50 YSHINLLHDSLRLFNTI-HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC------------SG 281
S+L + L DL G H ++I+ G + + G+ L+++Y+K +G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 282 DMRDCM-------------------KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
++ D M K+FE +P+ DLV WNT+I+G ++ Y ++ L
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLY-EETLRMI 227
Query: 323 KKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK 381
+++ PD + V+ + N+ S GK+IH +I+ + ++ I V ++L+ MY+K
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDAD-IYVASSLIDMYAK 286
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
C + D+ R+F + E + +S NS+IAG Q+G+ E LR F ML I P + +F S+
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ ACAH + G++ + GF+ S ++D+ + G + A+++ + M
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 49/190 (25%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F ++ C L GK LH +N + ++++ + +Y+KCG
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCG------------ 389
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I +A+Q+FD++ D+VS+ +I A G A+ LF+
Sbjct: 390 -------------------NIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK-------QLHCLAIYCGFDHYASVNNSLLTC 173
M +T+G + ++TA S+ + + I G +HYA+V++ L
Sbjct: 431 QM-----ETEG--IKAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL--- 480
Query: 174 YSRNGFLDEA 183
R G L+EA
Sbjct: 481 -GRAGRLEEA 489
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
S S +Q+HA +K + ++ + + L+++YS L D+ RLF+ + ++ S+I
Sbjct: 21 SRSQAQQLHAQVLKFQ--ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVI 78
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
Y HG+ ++L F ML + + P + F SVL +CA
Sbjct: 79 RCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 338/626 (53%), Gaps = 37/626 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A + F ++ +PD++ +N +I Y ++ + ++ DM+ + + FT ++ A
Sbjct: 38 AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG 97
Query: 144 NLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ KQ+H GF V NSL++ Y++ G + A+ VF ++ + + VSW S
Sbjct: 98 TSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD-RTVVSWTS 156
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ Y Q+ + +EAL +F+EM + D L S++TA+T++EDL G H + K G
Sbjct: 157 IISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLG 216
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
I L +YAK G + F + +P+L+LWN MISGY+ Y ++A+
Sbjct: 217 LEFEPDIVISLTTMYAK-RGLVEVARFFFNRMEKPNLILWNAMISGYANNG-YGEEAIKL 274
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F+++ D + + A + + S L + + K E R + VN L+ MY+
Sbjct: 275 FREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF-VNTGLIDMYA 333
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG++ AR +FDR+ + + V + MI GY HG G EA+ L+ M + + P + TF+
Sbjct: 334 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 393
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
+L+AC ++G V EG + F +M D G EP +HYSC++DLLGRAG L A I +MP
Sbjct: 394 LLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 452
Query: 501 PG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
PG + AA L+P N YV L+N+YA++ W VA +R
Sbjct: 453 PGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVR 512
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--- 600
+M +G+ K G S IE+ + F D SHP KEI L+ + +++K AGYVP
Sbjct: 513 LMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHME 572
Query: 601 ---------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
+ E+ L HHSE+LAVA+G++ST+ G + + KNLR C +CH+AIK IS +
Sbjct: 573 SVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLV 632
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD RFH FKDG CSCGD+W
Sbjct: 633 DREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 27/304 (8%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKC--SGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
Q + LI SG H+ + +I C GD+ K F E+ +PD++LWN +I GY+
Sbjct: 5 QVYVQLIVSGLHKCRFL---MIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 61
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNR 368
QK D + + + HP+ +F+ V+ AC S +GKQIH T K SN
Sbjct: 62 QK-NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN- 119
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ V N+LV+MY+K G + AR +FD++ + VS S+I+GY Q+G MEAL +F+ M +
Sbjct: 120 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 179
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
N+ P I VSV++A + + +G+ ++ + G E E + + + + G
Sbjct: 180 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKL-GLEFEPDIVISLTTMYAKRG--- 235
Query: 489 DAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
L+E F F ++E N + + + + YA +G EE + R M
Sbjct: 236 ----LVEVARF-----------FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 280
Query: 549 RGVQ 552
+ ++
Sbjct: 281 KNIR 284
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+ F L+ YA+ I AR +FD++ D+V ++ +I Y G + A+ L+ +M+
Sbjct: 321 DTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMK 380
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQ----LHCL---AIYCGFDHYASVNNSLLTCYSR 176
+ + T GL+TA N+ L+K+ H + I HY+ V + L R
Sbjct: 381 QAGVCPNDGTFIGLLTACKNS-GLVKEGWELFHLMPDHGIEPHHQHYSCVVDLL----GR 435
Query: 177 NGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHRE----GLEALQLF 219
G+L++A M IK VS W +++ A HR+ + A QLF
Sbjct: 436 AGYLNQAYDFIMSM-PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLF 482
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/644 (35%), Positives = 364/644 (56%), Gaps = 47/644 (7%)
Query: 71 LLAAYARQLRIASARQ-LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFD 128
L AAYAR +A+A L + ++N +I+A++ G SAL +F+ + R D
Sbjct: 48 LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPAARPD 107
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ FTL+ A +L + + A G+ V +SLL Y+R G + +A +VF
Sbjct: 108 STTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFV 167
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M +D V+W++MV + + L+A+Q+++ M + D + ++ A T+ ++
Sbjct: 168 RMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H HL++ G + + L+D+YAK +G + +VF + + V W+ MISG+
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAK-NGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSN 367
+Q + SD+AL F+ + G PD + V + ACSN+ LG+ +H ++
Sbjct: 286 AQNGQ-SDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR------ 338
Query: 368 RISVN----NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
R N A + MYSKCG+L A+ LF+ + + + + N+MIA HG G +AL LF
Sbjct: 339 RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLF 398
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ M ET + P + TF S+LSA +H+G V EG+ +F M + F P +HY C++DLL R
Sbjct: 399 QEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLAR 458
Query: 484 AGKLTDAERLIEAMPFNPGSIAL------------------KAANHFLQLEPSNAVPYVM 525
+G + +A L+ +M P ++A+ A++ L+L+P + +
Sbjct: 459 SGLVEEASDLLTSMKAEP-TVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLAL 517
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
++N+YAA+ KW++V +R+LM+D G +K PG S IE++ HVFV ED SHP +EI +
Sbjct: 518 VSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSK 577
Query: 586 LEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
+ ++ +M++ GY+P KE++L +HSE+LA+AFGLL+T G ++++KN
Sbjct: 578 VAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKN 637
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH+AIK+IS IA REI VRD RFH FKDG CSC DYW
Sbjct: 638 LRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 172/352 (48%), Gaps = 18/352 (5%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+ +LH L I + + +SL Y+R G L A+ +WN+++ A+
Sbjct: 27 LARLHALLIVSSSASHTLI-SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ AL++F+ + D T L+A L DL GG +G+ +
Sbjct: 86 RRGSPASALRVFRALPPAARP-DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ S L+ LYA+ G M D +KVF +P+ D V W+TM++G+ + D A+ ++++
Sbjct: 145 VCSSLLHLYARW-GAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLD-AIQMYRRMRE 202
Query: 328 VGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G D+ + VI AC+ + +G +H ++ +R + ++ + LV MY+K G L+
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATS-LVDMYAKNGLLD 261
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A R+F M N VS ++MI+G+AQ+G EALRLF M + I P + VS L AC+
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACS 321
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM-----IDLLGRAGKLTDAERL 493
+ G + + + + GF ++C+ ID+ + G L A+ L
Sbjct: 322 NIG-------FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQML 366
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 146/348 (41%), Gaps = 53/348 (15%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C R++ G S+H L++ + + + +Y+K G L A F H N
Sbjct: 215 VIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRN 274
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
S+ + +IS +A G ++ AL LF++M+
Sbjct: 275 DVSW-------------------------------SAMISGFAQNGQSDEALRLFRNMQA 303
Query: 125 KRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D L + A SN L L + +H I FD + + + YS+ G L
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGF-IVRRFDFNCILGTAAIDMYSKCGSLAS 362
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F + + +D + WN+M+ G H G +AL LFQEM + D T AS+L+A
Sbjct: 363 AQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSAL- 420
Query: 243 SLEDLV--GGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-P 294
S LV G L F H + + H L+DL A+ SG + + + +
Sbjct: 421 SHSGLVEEGKLWFGRMVNHFKITPAEKHYVC-----LVDLLAR-SGLVEEASDLLTSMKA 474
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+P + +W ++SG ++ LG N + PDD + ++S
Sbjct: 475 EPTVAIWVALLSGCLNNKKLE---LGESIADNILELQPDDVGVLALVS 519
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/703 (33%), Positives = 380/703 (54%), Gaps = 47/703 (6%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAH-------HA--FNQTQHANVFS 67
G+S+ AL L + ++ N + + + C ++ HA + + NVF
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
N L+A YAR ++ A +F + D +S+N+++S + G AL + +MR+
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 128 DTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D + +I AS S N Q+H A+ G D V NSL+ Y++ +
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 439
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F +M + KD VSW +++ + Q+ AL+LF+E+ + LD+ ++SIL A + L+
Sbjct: 440 IFDKMPD-KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 498
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ + H+++I+ G + + +G++D+Y +C G++ ++FE I D+V W +MI
Sbjct: 499 LISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGEC-GNVDYAARMFELIEFKDVVSWTSMI 556
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
S Y +++AL F + G PD S V ++SA ++LS GK+IH I+
Sbjct: 557 SCYVHNG-LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 615
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ + LV MY++CG LE +R +F+ + + V SMI Y HG G A+ LF
Sbjct: 616 VLEG-SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 674
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + +I P +I FV+VL AC+H+G + EG+++ MK + EP EHY+C++DLLGRA
Sbjct: 675 RMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRA 734
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
L +A + ++ M P + + AA L+++P N YV+++
Sbjct: 735 NHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVS 794
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+Y+A +W++V +R M+ G++K PG SWIEV ++H F+A D SHP EI++ L
Sbjct: 795 NVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLS 854
Query: 588 EMSRKM-KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
+++ K+ K+ GYV +K + L HSE+LA+A+G+L+T G + + KNL
Sbjct: 855 QITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNL 914
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+CGDCHN K IS RE+ +RD RFH FK G CSCGD W
Sbjct: 915 RVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/557 (29%), Positives = 272/557 (48%), Gaps = 63/557 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C +D G +H L +K +++N + +Y+KC L+
Sbjct: 182 TFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG-------- 233
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLF 119
ARQL FD++P+ D+VS+N++ISAY+ G + AL LF
Sbjct: 234 ---------------ARQL--------FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLF 270
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSR 176
+M++ + +T + A ++ IKQ +H + + V N+L+ Y+R
Sbjct: 271 GEMQKASLAPNTYTFVAALQACEDS-SFIKQGMFIHATVLKSSYYINVFVANALIAMYAR 329
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + EA +FY M + D +SWNSM+ + Q+ EALQ + EM D+ + S
Sbjct: 330 FGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 388
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK-CSGDMRDCMKVFEEIPQ 295
I+ A + + G+Q HA+ +K+G + +G+ L+D+YAK CS DC +F+++P
Sbjct: 389 IIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC--IFDKMPD 446
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQ 354
D+V W T+I+G++Q +S +AL F+++ G D ++ ACS L S K+
Sbjct: 447 KDVVSWTTIIAGHAQNGSHS-RALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 505
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH+ I+ + + + + N +V +Y +CGN++ A R+F+ + + VS SMI+ Y +G
Sbjct: 506 IHSYIIRKGL--SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 563
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ EAL LF M ET + P +I+ VS+LSA A + +G++ + GF EG
Sbjct: 564 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLA 622
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
S ++D+ R G L K+ N F + + V + + N Y G
Sbjct: 623 STLVDMYARCGTLE------------------KSRNVFNFIRNKDLVLWTSMINAYGMHG 664
Query: 535 KWEEVATIRRLMRDRGV 551
+ R M D +
Sbjct: 665 CGRAAIDLFRRMEDESI 681
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 267/565 (47%), Gaps = 76/565 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL+ C ++ L G+ +HA + N + S +LS + +Y KCGCL
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCL--------- 130
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
A +LFD +P + ++N +I AY G+ +L L+
Sbjct: 131 ----------------------VDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 168
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIK------QLHCLAIYCGFDHYASVNNSLLTC 173
++MR D T ++ A L+K ++H LAI G+ V NS++
Sbjct: 169 REMRVSGIPLDACTFPCILKACG----LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGM 224
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ L+ A+++F M E +D VSWNSM+ AY + + +EAL+LF EM L + YT
Sbjct: 225 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYT 284
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ L A + G+ HA ++KS ++ N + + LI +YA+ G M + +F +
Sbjct: 285 FVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF-GKMGEAANIFYNM 343
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-G 352
D + WN+M+SG+ Q Y +AL + ++ G PD + + +I+A + +L G
Sbjct: 344 DDWDTISWNSMLSGFVQNGLY-HEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
QIHA +K + S+ + V N+LV MY+K +++ +FD+MP+ + VS ++IAG+AQ
Sbjct: 403 MQIHAYAMKNGLDSD-LQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQ 461
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF----- 467
+G AL LF + I + S+L AC+ G K S +K++ +
Sbjct: 462 NGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKG 514
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLA 527
+ + ++D+ G G + A R+ E + F + V + +
Sbjct: 515 LSDLVLQNGIVDVYGECGNVDYAARMFELIEFK------------------DVVSWTSMI 556
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQ 552
+ Y +G E + LM++ GV+
Sbjct: 557 SCYVHNGLANEALELFHLMKETGVE 581
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 173/354 (48%), Gaps = 31/354 (8%)
Query: 207 GQHREGLEAL-QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
G E ++L LF Q LD +S+L S + L G Q HAH+I S N
Sbjct: 54 GSVNEAFQSLTDLFANQSPSQFSLD-EAYSSVLELCGSKKALSEGQQVHAHMITSNALFN 112
Query: 266 S-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
S + + L+ +Y KC G + D K+F+ +P + WN MI Y E +L +++
Sbjct: 113 SVFLSTRLVFMYGKC-GCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGE-PLGSLELYRE 170
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G D C+F C++ AC L G ++H L IK E + + V N++V MY+KC
Sbjct: 171 MRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCN 229
Query: 384 NLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
+L AR+LFDRMPE + VS NSMI+ Y+ +G +EALRLF M + ++ P TFV+ L
Sbjct: 230 DLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAAL 289
Query: 443 SACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
AC + + +G + +++K + + +I + R GK+ +
Sbjct: 290 QACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGE------------ 335
Query: 502 GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
AAN F ++ + + + + + + +G + E MRD G +KP
Sbjct: 336 ------AANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG--QKP 381
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/703 (33%), Positives = 379/703 (53%), Gaps = 47/703 (6%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAH-------HA--FNQTQHANVFS 67
G+S+ AL L + ++ N + + + C ++ HA + + NVF
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
N L+A YAR ++ A +F + D +S+N+++S + G AL + +MR+
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415
Query: 128 DTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D + +I AS S N Q+H A+ G D V NSL+ Y++ +
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 475
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F +M + KD VSW +++ + Q+ AL+LF+E+ + LD+ ++SIL A + L+
Sbjct: 476 IFDKMPD-KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 534
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ + H+++I+ G + + +G++D+Y +C G++ ++FE I D+V W +MI
Sbjct: 535 LISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGEC-GNVDYAARMFELIEFKDVVSWTSMI 592
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
S Y +++AL F + G PD S V ++SA ++LS GK+IH I+
Sbjct: 593 SCYVHNG-LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 651
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ + LV MY++CG LE +R +F+ + + V SMI Y HG G A+ LF
Sbjct: 652 VLEG-SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 710
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + +I P +I FV+VL AC+H+G + EG+++ MK + EP EHY C++DLLGRA
Sbjct: 711 RMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRA 770
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
L +A + ++ M P + + AA L+++P N YV+++
Sbjct: 771 NHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVS 830
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA +W++V +R M+ G++K PG SWIEV ++H F+A D SHP EI++ L
Sbjct: 831 NVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLS 890
Query: 588 EMSRKM-KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
+++ K+ K+ GYV +K + L HSE+LA+A+G+L+T G + + KNL
Sbjct: 891 QITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNL 950
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+CGDCHN K IS RE+ +RD RFH FK G CSCGD W
Sbjct: 951 RVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 162/557 (29%), Positives = 272/557 (48%), Gaps = 63/557 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C +D G +H L +K +++N + +Y+KC L+
Sbjct: 218 TFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG-------- 269
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLF 119
ARQL FD++P+ D+VS+N++ISAY+ G + AL LF
Sbjct: 270 ---------------ARQL--------FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLF 306
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSR 176
+M++ + +T + A ++ IKQ +H + + V N+L+ Y+R
Sbjct: 307 GEMQKASLAPNTYTFVAALQACEDS-SFIKQGMFIHATVLKSSYYINVFVANALIAMYAR 365
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + EA +FY M + D +SWNSM+ + Q+ EALQ + EM D+ + S
Sbjct: 366 FGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 424
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK-CSGDMRDCMKVFEEIPQ 295
I+ A + + G+Q HA+ +K+G + +G+ L+D+YAK CS DC +F+++P
Sbjct: 425 IIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC--IFDKMPD 482
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQ 354
D+V W T+I+G++Q +S +AL F+++ G D ++ ACS L S K+
Sbjct: 483 KDVVSWTTIIAGHAQNGSHS-RALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 541
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH+ I+ + + + + N +V +Y +CGN++ A R+F+ + + VS SMI+ Y +G
Sbjct: 542 IHSYIIRKGL--SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 599
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ EAL LF M ET + P +I+ VS+LSA A + +G++ + GF EG
Sbjct: 600 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLA 658
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
S ++D+ R G L K+ N F + + V + + N Y G
Sbjct: 659 STLVDMYARCGTLE------------------KSRNVFNFIRNKDLVLWTSMINAYGMHG 700
Query: 535 KWEEVATIRRLMRDRGV 551
+ R M D +
Sbjct: 701 CGRAAIDLFRRMEDESI 717
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 267/565 (47%), Gaps = 76/565 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL+ C ++ L G+ +HA + N + S +LS + +Y KCGCL
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCL--------- 166
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
A +LFD +P + ++N +I AY G+ +L L+
Sbjct: 167 ----------------------VDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 204
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIK------QLHCLAIYCGFDHYASVNNSLLTC 173
++MR D T ++ A L+K ++H LAI G+ V NS++
Sbjct: 205 REMRVSGIPLDACTFPCILKACG----LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGM 260
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ L+ A+++F M E +D VSWNSM+ AY + + +EAL+LF EM L + YT
Sbjct: 261 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYT 320
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ L A + G+ HA ++KS ++ N + + LI +YA+ G M + +F +
Sbjct: 321 FVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF-GKMGEAANIFYNM 379
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-G 352
D + WN+M+SG+ Q Y +AL + ++ G PD + + +I+A + +L G
Sbjct: 380 DDWDTISWNSMLSGFVQNGLY-HEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
QIHA +K + S+ + V N+LV MY+K +++ +FD+MP+ + VS ++IAG+AQ
Sbjct: 439 MQIHAYAMKNGLDSD-LQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQ 497
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF----- 467
+G AL LF + I + S+L AC+ G K S +K++ +
Sbjct: 498 NGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKG 550
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLA 527
+ + ++D+ G G + A R+ E + F + V + +
Sbjct: 551 LSDLVLQNGIVDVYGECGNVDYAARMFELIEFK------------------DVVSWTSMI 592
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQ 552
+ Y +G E + LM++ GV+
Sbjct: 593 SCYVHNGLANEALELFHLMKETGVE 617
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 173/354 (48%), Gaps = 31/354 (8%)
Query: 207 GQHREGLEAL-QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
G E ++L LF Q LD +S+L S + L G Q HAH+I S N
Sbjct: 90 GSVNEAFQSLTDLFANQSPSQFSLD-EAYSSVLELCGSKKALSEGQQVHAHMITSNALFN 148
Query: 266 S-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
S + + L+ +Y KC G + D K+F+ +P + WN MI Y E +L +++
Sbjct: 149 SVFLSTRLVFMYGKC-GCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGE-PLGSLELYRE 206
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G D C+F C++ AC L G ++H L IK E + + V N++V MY+KC
Sbjct: 207 MRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIK-EGYVSIVFVANSIVGMYTKCN 265
Query: 384 NLEDARRLFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
+L AR+LFDRMPE + VS NSMI+ Y+ +G +EALRLF M + ++ P TFV+ L
Sbjct: 266 DLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAAL 325
Query: 443 SACAHTGKVAEGQ-KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
AC + + +G + +++K + + +I + R GK+ +
Sbjct: 326 QACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGE------------ 371
Query: 502 GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
AAN F ++ + + + + + + +G + E MRD G +KP
Sbjct: 372 ------AANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG--QKP 417
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/711 (34%), Positives = 378/711 (53%), Gaps = 72/711 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V + C L G+S+H ++ + +A L+N I++Y K G L
Sbjct: 203 TMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDL---------- 252
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
SA +LF+ +P + +IS Y G + AL++F
Sbjct: 253 ---------------------YSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFA 291
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFD-HYASVNNSLLTCYSR 176
M+E + + + T+ G++ A + L +K+ +H I D + +L+ Y+
Sbjct: 292 KMQEFKMEPNQVTMVGVLCACAR-LGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYAD 350
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L + +VF + E K +SWN+++ + ++ + EAL LF +M + L D Y+LAS
Sbjct: 351 TGNLRDCHKVFETIKE-KTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 409
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L+A ++ G Q H ++IK+G + N + + LID+YAKC G + K+FE+I +
Sbjct: 410 SLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKC-GFVHSANKMFEKIKEK 467
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQI 355
LV WN+MI G+SQ YS +A+ F ++ D +F+ VI ACS+L GK +
Sbjct: 468 SLVTWNSMICGFSQNG-YSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWV 526
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H I +R + ++ AL MYSKCG L+ A +FDRM E + VS + MIAGY HG
Sbjct: 527 HHKLIMYGLRKDSY-LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQ 585
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
+ LF ML + I P +ITF+ +LSAC+H G V EG+ YF+ M + FG EP+ +H++
Sbjct: 586 INATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFA 644
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPS 518
CM+DLL RAG L A ++I ++PF S I + L ++ +
Sbjct: 645 CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTA 704
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ Y +L+NIYA G W++ +R +M+ +G++K PG+S IE+ K+++ F D SH
Sbjct: 705 DTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQ 764
Query: 579 IKEIHNYLEEMSRKMKQAGY--VPD----------KEKRLVHHSEKLAVAFGLLSTSYGE 626
K+I+ +LE + Y PD KE +V HSEKLA+AFG+++T G
Sbjct: 765 TKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGT 824
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLR+C DCH+ K S I GREI +RD RFHCF++G CSC DYW
Sbjct: 825 TLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/501 (28%), Positives = 239/501 (47%), Gaps = 41/501 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK C G DL G +H +K A + + +Y + CL A A
Sbjct: 102 VFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKA---- 157
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
FD +P D+V++++++ + G L +F
Sbjct: 158 ---------------------------FDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFS 190
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + D T+ + A S +L L + +H + + AS+NNSL+ Y + G
Sbjct: 191 QMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLG 250
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A+R+F E + W M+ Y Q EAL +F +M ++ + T+ +L
Sbjct: 251 DLYSAERLF-ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVL 309
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
A L + G H +I+ +G L++LYA +G++RDC KVFE I +
Sbjct: 310 CACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYAD-TGNLRDCHKVFETIKEKT 368
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIH 356
++ WNT+IS +++ + ++AL F ++ G PD S +SAC +S S LG QIH
Sbjct: 369 ILSWNTLISIFTRNGQ-PEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIH 427
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
IK ++ V NAL+ MY+KCG + A ++F+++ E + V+ NSMI G++Q+G
Sbjct: 428 GYIIKTGNFND--FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYS 485
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+EA+ LF+ M + +TF+SV+ AC+H G + +G K+ M+G + +
Sbjct: 486 VEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTA 544
Query: 477 MIDLLGRAGKLTDAERLIEAM 497
+ D+ + G+L A + + M
Sbjct: 545 LTDMYSKCGELQMAHGVFDRM 565
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 224/466 (48%), Gaps = 13/466 (2%)
Query: 40 FILLYSKCGC---LSAAH-HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
++ L+ +C L+ H H F H + + L+ +YA+ S++++FD P+PD
Sbjct: 4 YMPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPD 63
Query: 96 LVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLITASS--NNLCLIKQLH 152
+ LI Y G E A+SL+ +M + + F ++ A S +L + ++H
Sbjct: 64 SFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVH 123
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
I CGF+ A V SLL Y LD+A + F M I+D V+W+S+V+ + Q+ +
Sbjct: 124 GRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTM-PIRDVVAWSSIVLNFVQNGQA 182
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
E L +F +M+S + D T+ S+ A + L L G H ++++ N+ + + L
Sbjct: 183 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSL 242
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
I +Y K GD+ ++FE +P W MIS Y+Q + +AL F K+ P
Sbjct: 243 IVMYGKL-GDLYSAERLFENVPCRMTAPWTPMISCYNQSGCF-QEALNVFAKMQEFKMEP 300
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
+ + V V+ AC+ L G+ +H I+ + + AL+ +Y+ GNL D ++
Sbjct: 301 NQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKV 360
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F+ + E +S N++I+ + ++G EAL LF M + P + + S LSAC
Sbjct: 361 FETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFS 420
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + + F ++ +ID+ + G + A ++ E +
Sbjct: 421 QLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKI 464
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 233/536 (43%), Gaps = 67/536 (12%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+ QLH G + + L+ Y++ G + +KRVF + D W ++ Y
Sbjct: 17 LTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK-PDSFMWGVLIKCYV 75
Query: 208 QHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
EA+ L+ EMV Q + + S+L A + DL G + H +IK GF ++
Sbjct: 76 WGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDA 135
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + L+ +Y + S + D K F+ +P D+V W++++ + Q + S + L F ++
Sbjct: 136 VVETSLLCMYGEMSC-LDDACKAFDTMPIRDVVAWSSIVLNFVQNGQAS-EGLDMFSQMI 193
Query: 327 RVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
PD + + V ACS L S LG+ +H ++ EI SN S+NN+L+ MY K G+L
Sbjct: 194 SEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNA-SLNNSLIVMYGKLGDL 252
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
A RLF+ +P T MI+ Y Q G EAL +F M E + P +T V VL AC
Sbjct: 253 YSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCAC 312
Query: 446 AHTGKVAEGQKY--FSMMKDMFGFEPEGEHYS-CMIDLLGRAGKLTDAERLIEAMPFNPG 502
A G+V EG+ F + + M +PE + +++L G L D ++ E
Sbjct: 313 ARLGRVKEGRSVHGFVIRRAM---DPELDFLGPALMELYADTGNLRDCHKVFET------ 363
Query: 503 SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP------- 555
++ + + L +I+ +G+ EE + M+ +G+
Sbjct: 364 ------------IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSL 411
Query: 556 ----GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSE 611
S+ ++ Q+H ++ + G+ + N L +M K G+V K E
Sbjct: 412 SACGTISFSQLGAQIHGYIIKTGNFNDF--VQNALIDMYAK---CGFVHSANKMF----E 462
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
K+ E LV N ICG N IT+ D +C K
Sbjct: 463 KIK-----------EKSLVTWNSMICGFSQNGYSV------EAITLFDQMYMNCVK 501
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 323/564 (57%), Gaps = 38/564 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRN---GFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+KQ+ +I + + L+ ++N +D A ++F + + D V +NSM
Sbjct: 42 LKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQ-PDIVLFNSMFR 100
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y + L+A+ LF + ++ L D YT S+L A + G Q H IK G ++
Sbjct: 101 GYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNE 160
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
N ++ LI++YA C+ D+ +VF+EI +P +V +N +I+GY++ ++AL F++
Sbjct: 161 NPYVCPTLINMYAGCN-DVDGAQRVFDEILEPCVVSYNAIITGYARSSR-PNEALSLFRQ 218
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
L P+D + + V+S+C+ L LGK IH +K + VN AL+ MY+KCG
Sbjct: 219 LQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEY-VKKNGLDKYVKVNTALIDMYAKCG 277
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+L+ A +F+ M +T + ++MI YA HG G + + +FE M + P ITF+ +L
Sbjct: 278 SLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLY 337
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
AC+HTG V EG +YF M +++G P +HY CM+DLLGRAG L +A + I+ +P P
Sbjct: 338 ACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTP 397
Query: 504 I-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
I A + N L+L+ S+ YV+L+N+ A +GKWE+V T+R+LM
Sbjct: 398 ILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLM 457
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
+G K PG S IEV +H F + DG H + +H L+E+ +++K GYVPD
Sbjct: 458 IHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVV 517
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
KE L +HSEKLA++FGLL+T G I V+KNLR+CGDCH+A K IS++ R
Sbjct: 518 HPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDR 577
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
EI +RD RFH FKDG+CSCGDYW
Sbjct: 578 EIILRDVQRFHHFKDGKCSCGDYW 601
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 45/317 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK CV + GK LH L +K + + Y+ I +Y+ C + A F++
Sbjct: 129 TFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEI 188
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
V S+N ++ YAR R ALSLF+
Sbjct: 189 LEPCVVSYNAIITGYARSSR-------------------------------PNEALSLFR 217
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ ++ + T+ ++++ + L L K +H G D Y VN +L+ Y++ G
Sbjct: 218 QLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCG 277
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD A VF M ++D +W++M+VAY H +G + + +F+EM ++ D T +L
Sbjct: 278 SLDGAISVFESMS-VRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLL 336
Query: 239 TAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
A + + G ++ + I G H G ++DL + +G + + K +E+
Sbjct: 337 YACSHTGLVDEGFRYFYSMSEVYGIIPGI---KHYGC-MVDLLGR-AGLLHEAYKFIDEL 391
Query: 294 P-QPDLVLWNTMISGYS 309
P +P +LW T++S S
Sbjct: 392 PIKPTPILWRTLLSSCS 408
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/697 (32%), Positives = 361/697 (51%), Gaps = 108/697 (15%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYN 100
LY C + + ++T + +N+ + + + A +L +Q P+PD L +Y
Sbjct: 47 LYHSCATIGTSVLP-SETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYC 105
Query: 101 TLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG- 159
+++ AD + + ++ + DG S L+ + + CG
Sbjct: 106 SVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVF--------------MYVTCGD 151
Query: 160 -------FDHYAS----VNNSLLTCYSRNGFLDE------------------AKRVFYEM 190
FD A+ + N L+ Y++ G E A+++F E+
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDEL 211
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
G+ +D +SWNSM+ Y + + L LF++M+ L + D+ T+ S+ +
Sbjct: 212 GD-RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNC------ 264
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
L+D+Y+K SG++ ++VFE + + +V W +MI+GY+
Sbjct: 265 ---------------------LLDMYSK-SGNLNSAIQVFETMGERSVVSWTSMIAGYA- 301
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+E SD ++ F ++ + P+ + C++ AC++L+ G++IH ++ +R
Sbjct: 302 REGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDR- 360
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V NALV MY KCG L AR LFD +PE + VS MIAGY HG G EA+ F M +
Sbjct: 361 HVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNS 420
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
I P ++F+S+L AC+H+G + EG +F+MM++ EP+ EHY+C++DLL RAG L+
Sbjct: 421 GIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSK 480
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A + I+ MP P + +A K A H +LEP N YV+LANIYA
Sbjct: 481 AYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAE 540
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+ KWEEV +R + RG++K PG SWIE+K ++H+FV D SHP+ +I L++ +
Sbjct: 541 AEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTR 600
Query: 593 MKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
MK+ G+ P +KE L HSEK+A+AFG+LS G+ + V KNLR+CGDC
Sbjct: 601 MKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDC 660
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H KF+S + R+I +RD+ RFH FKDG CSC +W
Sbjct: 661 HEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 353/714 (49%), Gaps = 89/714 (12%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G LH K L N+ I +Y KCG L A F + NV S+ L+
Sbjct: 20 LRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVG 79
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE-KRFDTDGFT 133
+ R GD L L +MR + +T
Sbjct: 80 FLRH-------------------------------GDATGCLRLLGEMRTASEAAPNEYT 108
Query: 134 LSGLITASSNNLCLIKQ------LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
LS AS C++ +H L + G+ + V +SL+ YS+ G + +A+RVF
Sbjct: 109 LS----ASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVF 164
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV--SLQLGLDMYTLASILTAFTSLE 245
G +WN+MV Y G +AL +F+EM Q D +T AS+L A + L
Sbjct: 165 DGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLG 224
Query: 246 DLVGGLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
G Q HA + SGF N+ + L+D+Y KC + M+VFE + + +++ W
Sbjct: 225 ATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCR-RLPVAMQVFERLERKNVIQWTA 283
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKI 362
++ G++Q+ + + +AL F++ R G PD V+ ++ + G+Q+H IK
Sbjct: 284 VVVGHAQEGQVT-EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD 342
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
++ +S N++V MY KCG ++A R+F M N VS +M+ G +HG+G EA+ L
Sbjct: 343 PTGTD-VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVAL 401
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
FE M + P +T++++LSAC+H G V E ++YFS ++ P+ EHY+CM+DLLG
Sbjct: 402 FEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLG 461
Query: 483 RAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVM 525
RAG+L +A LI MP P ++ +A + L ++ N V YV
Sbjct: 462 RAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVT 521
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV---AEDGSHPMIKEI 582
L+N+ A +G+W E +R MR RG++K+ G SW+EV K++H F E+ +HP +I
Sbjct: 522 LSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDI 581
Query: 583 HNYLEEMSRKMK-QAGYVPDKEKRLVH-------------HSEKLAVAFGLLST-----S 623
L +M +M+ Q GY D + +H HSE+LAV LL
Sbjct: 582 RRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGG 641
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+GEPI V KNLR+CGDCH K +SA+ R + VRD RFH F+ G CSC DYW
Sbjct: 642 HGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 200/432 (46%), Gaps = 40/432 (9%)
Query: 134 LSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
++GL+ AS+ + L QLH GF + N+L+ Y + G LD A VF M
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGG 250
+ ++ VSW +++V + +H + L+L EM + + + YTL++ L A + D G
Sbjct: 67 D-RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAG 125
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYS 309
+ H +++G+ ++ + S L+ +Y+K G + D +VF+ + WN M+SGY+
Sbjct: 126 VGIHGLCVRAGYQEHDVVASSLVLVYSK-GGRIGDARRVFDGAGLGSGIATWNAMVSGYA 184
Query: 310 QKEEYSDQALGCFKKLNR-VGYH-PDDCSFVCVISACSNLSPSL-GKQIHALTIK--IEI 364
D AL F+++ R G H PD+ +F ++ ACS L + G Q+HA
Sbjct: 185 HAGHGRD-ALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 243
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
SN I + ALV MY KC L A ++F+R+ N + +++ G+AQ G EAL LF
Sbjct: 244 ASNAI-LAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFR 302
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSC---MIDL 480
+ P + SV+ A V +G Q + +KD P G S ++D+
Sbjct: 303 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD-----PTGTDVSAGNSIVDM 357
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
+ G +AER+ F ++ N V + + N G E
Sbjct: 358 YLKCGLPDEAERM------------------FREMRAPNVVSWTTMVNGLGKHGLGREAV 399
Query: 541 TIRRLMRDRGVQ 552
+ MR GV+
Sbjct: 400 ALFEEMRAGGVE 411
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/583 (38%), Positives = 325/583 (55%), Gaps = 45/583 (7%)
Query: 130 DGFTLSGLITASSNNLCLIK-----QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
D FT +I A S CL ++H + G+ ++NSL+T Y + + ++
Sbjct: 9 DNFTFPFIIKACS---CLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
+VF EM + K+ VSW++++ A Q E LF++M+S + +IL A +
Sbjct: 66 QVFDEMPD-KNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEG---SRPSRGAILNAMACV 121
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ ++++G + + S ++A+C G + K+F+ I DLV W T
Sbjct: 122 RSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARC-GRVEVARKLFDGIMSKDLVTWATT 180
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I Y K + +ALG K++ G PD + + VI ACS L+ L +H +
Sbjct: 181 IEAYV-KADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGF 239
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ ++V AL+ +Y KCG+L AR++FD M E N ++ ++MI+GY HG G EAL LF
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
+ M + ++ P +ITFVS+LSAC+H+G VAEG + F+ M FG P EHY+CM+D+LGR
Sbjct: 300 DQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGR 358
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
AGKL +A IE MP P + +A A L+P NA YV+L
Sbjct: 359 AGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVIL 418
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
NIY +GK +E +IR LM++RGV+K G+S IE+K +++ FVA D SHP I++ L
Sbjct: 419 YNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSEL 478
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
E + +++Q GY PD KE L HSEKLA+ FGLL+ G I + KNL
Sbjct: 479 ERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNL 538
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+CGDCH A KFIS + GREI VRD +RFH FK+G CSC DYW
Sbjct: 539 RVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 199/468 (42%), Gaps = 44/468 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K C R G +H +K ++SN I +Y KC + F
Sbjct: 12 TFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVF--- 68
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
D++P + VS++ +I A + SLF+
Sbjct: 69 ----------------------------DEMPDKNAVSWSAIIGACLQDDRCKEGFSLFR 100
Query: 121 DM-REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M E + G L+ + S+ ++ + + G D SV ++ ++R G
Sbjct: 101 QMLSEGSRPSRGAILNAMACVRSHEEA--DDVYRVVVENGLDFDQSVQSAAAGMFARCGR 158
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A+++F + KD V+W + + AY + LEAL L ++M+ + D TL ++
Sbjct: 159 VEVARKLFDGIMS-KDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIR 217
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNS--HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
A ++L H +I +GF N + + LIDLY KC G + KVF+ + + +
Sbjct: 218 ACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKC-GSLTYARKVFDGMQERN 275
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQI 355
++ W+ MISGY + +AL F ++ + PD +FV ++SACS+ L +
Sbjct: 276 IITWSAMISGYGM-HGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECF 333
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
+++ + + R +V + + G L++A +RMP ++ + G + +
Sbjct: 334 NSMARDFGV-TPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHL 392
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
++ + L P +V + + TGK E ++MK+
Sbjct: 393 NVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKN 440
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
R+G PD+ +F +I ACS L G +IH +K +S ++ ++N+L+ MY KC
Sbjct: 3 RLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQS-QVFISNSLITMYGKCDKY 61
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
E +R++FD MP+ N VS +++I Q E LF ML P+ ++ + AC
Sbjct: 62 ELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-AC 120
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + A+ Y ++++ F+ + S + R G++ A +L + +
Sbjct: 121 VRSHEEAD-DVYRVVVENGLDFDQSVQ--SAAAGMFARCGRVEVARKLFDGI 169
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/711 (33%), Positives = 368/711 (51%), Gaps = 73/711 (10%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++LK C L TG+S+H H I+ NQ+ A
Sbjct: 36 ELLKVCANSSYLRTGESIHG---------------HLIVT--------------NQSSRA 66
Query: 64 -NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+V+ N L+ Y + AR++FD +P+ ++VS+ ++ Y + G L LFK M
Sbjct: 67 KDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 123 ---REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
E R + T+ +SS + KQ H + G + V N+L+ YS
Sbjct: 127 VFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSG 186
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
EA RV ++ D ++S + Y G +EG E L+ M L LD T S
Sbjct: 187 NGEAIRVLDDLPYC-DLSVFSSALSGYLECGAFKEGAEVLR---RMAKEDLVLDNITYLS 242
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L ++L DL Q H+ +++ GF+ +I++Y KC G + +VF+
Sbjct: 243 CLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKC-GKVLYAQRVFDNTHAQ 301
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
++VL T++ Y Q + + ++AL F K++ P++ +F +++ + LS G +
Sbjct: 302 NIVLNTTIMDAYFQDKSF-EEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLL 360
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H L +K R N + V NALV MY+K G++EDAR+ F M + V+ N+MI G++ HG+
Sbjct: 361 HGLVLKSGYR-NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGL 419
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G E L F+ M+ P ITF+ VL AC+H G V +G YF+ + F +P+ +HY+
Sbjct: 420 GREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYT 479
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPS 518
C++ LL +AG DAE + P +A +A A + + P+
Sbjct: 480 CIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPN 539
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ YV+L+NI+A S +WE VA +R LM RGV+K+PG SWI ++ Q HVF+AE+ HP
Sbjct: 540 DSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPE 599
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
I I+ ++E+ K++ GY PD +E L +HSEKLAVA+GL+ T
Sbjct: 600 ITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENS 659
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V KN+RIC DCH+AIK IS I+ R I +RD+ RFH F+DG+CSC DYW
Sbjct: 660 PLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L+ C RDL + +H+ ++ S I +Y KCG + A F+ T
Sbjct: 239 TYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNT 298
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ V T++ AY E AL+LF
Sbjct: 299 HAQNI-------------------------------VLNTTIMDAYFQDKSFEEALNLFS 327
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M K + +T + + S L L+K LH L + G+ ++ V N+L+ Y+++
Sbjct: 328 KMDTKEVPPNEYTFA-ISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +++A++ F M +D V+WN+M+ + H G E L+ F M+ + T +
Sbjct: 387 GSIEDARKAFSGM-TFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGV 445
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
L A + + + GL + L+K + + ++ L +K +G +D P +
Sbjct: 446 LQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSK-AGMFKDAEDFMRTAPIE 504
Query: 296 PDLVLWNTMISG 307
D+V W +++
Sbjct: 505 WDVVAWRALLNA 516
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/656 (32%), Positives = 368/656 (56%), Gaps = 39/656 (5%)
Query: 58 NQT-QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
NQT H+++ N L+ Y + ++ AR LFD +P ++VS+N L++ Y G+ L
Sbjct: 42 NQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVL 101
Query: 117 SLFKDMRE-KRFDTDGFTLSGLITASSNNLCLIKQLHC--LAIYCGFDHYASVNNSLLTC 173
LFK+M + + + + ++A S+ + + + C L G + V ++L+
Sbjct: 102 VLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHM 161
Query: 174 YSRNGFLDEAKRVFYEM-GE-IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
YSR ++ A +V + GE + D S+NS++ A + G EA+++ + MV + D
Sbjct: 162 YSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDH 221
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T ++ + DL GL+ HA L++ G + +GS LID+Y KC G++ + VF+
Sbjct: 222 VTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKC-GEVLNARNVFD 280
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ ++V+W +++ Y Q Y +++L F ++R G P++ +F +++AC+ ++
Sbjct: 281 GLQNRNVVVWTALMTAYLQNG-YFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALR 339
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G +HA K+ + N + V NAL+ MYSK G+++ + +F M + ++ N+MI GY
Sbjct: 340 HGDLLHARVEKLGFK-NHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGY 398
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
+ HG+G +AL++F+ M+ P +TF+ VLSA +H G V EG Y + + F EP
Sbjct: 399 SHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPG 458
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFL 513
EHY+CM+ LL RAG L +AE ++ +A + A L
Sbjct: 459 LEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVL 518
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
Q++P + Y +L+N+YA + +W+ V TIR+LMR+R ++K+PG SW++++ +HVF++E
Sbjct: 519 QMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEG 578
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
+HP +I+ ++++ +K GYVP+ KE L +HSEKLA+A+GL+
Sbjct: 579 SNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMK 638
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI ++KNLR+C DCH A+K IS + R I VRD RFH F+DG C+C D+W
Sbjct: 639 IPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 34/262 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+ C RDL G +HA L+ + F ++ + I +Y KCG + A + F+
Sbjct: 223 TYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGL 282
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+ NV V + L++AY G E +L+LF
Sbjct: 283 QNRNV-------------------------------VVWTALMTAYLQNGYFEESLNLFT 311
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + +T + L+ A + L LH GF ++ V N+L+ YS++G
Sbjct: 312 CMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSG 371
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D + VF +M +D ++WN+M+ Y H G +ALQ+FQ+MVS + + T +L
Sbjct: 372 SIDSSYNVFTDM-IYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVL 430
Query: 239 TAFTSLEDLVGGLQFHAHLIKS 260
+A++ L + G + HL+++
Sbjct: 431 SAYSHLGLVKEGFYYLNHLMRN 452
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/711 (33%), Positives = 372/711 (52%), Gaps = 73/711 (10%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++LK C L G+S+HA H I+ NQ+ A
Sbjct: 36 ELLKVCANSSYLRIGESIHA---------------HLIVT--------------NQSSRA 66
Query: 64 -NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ + N L+ Y + AR+LFD +P+ ++VS+ ++ Y + G L LFK M
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 123 ---REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
E R + T+ ++S + KQ H + G + V N+L+ YS
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
EA RV ++ D ++S + Y G +EGL+ L+ + + + T S
Sbjct: 187 NGEAIRVLDDLPYC-DLSVFSSALSGYLECGAFKEGLDVLR---KTANEDFVWNNLTYLS 242
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L F++L DL LQ H+ +++ GF+ LI++Y KC G + +VF++
Sbjct: 243 SLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKC-GKVLYAQRVFDDTHAQ 301
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
++ L T++ Y Q + + ++AL F K++ P++ +F ++++ + LS G +
Sbjct: 302 NIFLNTTIMDAYFQDKSF-EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL 360
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H L +K R N + V NALV MY+K G++EDAR+ F M + V+ N+MI+G + HG+
Sbjct: 361 HGLVLKSGYR-NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGL 419
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EAL F+ M+ T P ITF+ VL AC+H G V +G YF+ + F +P+ +HY+
Sbjct: 420 GREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYT 479
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS 518
C++ LL +AG DAE + P +A K A + ++ P+
Sbjct: 480 CIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPN 539
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ YV+L+NI+A S +WE VA +R LM +RGV+K+PG SWI ++ Q HVF+AED HP
Sbjct: 540 DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPE 599
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
I I+ ++E+ K+K GY PD +E L +HSEKLAVA+GL+ T
Sbjct: 600 ITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKS 659
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V KN+RIC DCH+AIK IS I+ R I +RD+ RFH F DG+CSC DYW
Sbjct: 660 PLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 41/320 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L+ RDL +H+ ++ I +Y KCG + A F+ T
Sbjct: 239 TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT 298
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+F N T++ AY E AL+LF
Sbjct: 299 HAQNIF-LNT------------------------------TIMDAYFQDKSFEEALNLFS 327
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M K + +T + L+ + + L L+KQ LH L + G+ ++ V N+L+ Y+++
Sbjct: 328 KMDTKEVPPNEYTFAILLNSIA-ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +++A++ F M +D V+WN+M+ H G EAL+ F M+ + T +
Sbjct: 387 GSIEDARKAFSGM-TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP- 294
L A + + + GL + L+K F I + ++ L +K +G +D P
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSK-AGMFKDAEDFMRTAPI 503
Query: 295 QPDLVLWNTMISGYSQKEEY 314
+ D+V W T+++ + Y
Sbjct: 504 EWDVVAWRTLLNACYVRRNY 523
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/711 (32%), Positives = 368/711 (51%), Gaps = 92/711 (12%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLR 80
LHA +K + + N + +Y KCG ++ A F + ++F +N ++ Y++
Sbjct: 164 LHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYG 223
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
A +F ++P+ D VS+NTLIS ++ G LS F +M F + T +++A
Sbjct: 224 PYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSA 283
Query: 141 --SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S ++L LH + A + + L+ Y++ G L A+RVF +GE +++VS
Sbjct: 284 CASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGE-QNQVS 342
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
W ++ Q +AL LF +M + LD +TLA+IL + G H + I
Sbjct: 343 WTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAI 402
Query: 259 KSGFHQNSHIGSGLIDLYAKC------------------------------SGDMRDCMK 288
KSG +G+ +I +YA+C +GD+ +
Sbjct: 403 KSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQ 462
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
F+ +P+ +++ WN+M+S Y Q +S++ + + + PD +F I AC++L+
Sbjct: 463 CFDMMPERNVITWNSMLSTYIQ-HGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLA 521
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG Q+ + K + S+ +SV N++V MYS+CG +++AR++FD + N +S N+M+
Sbjct: 522 TIKLGTQVVSHVTKFGLSSD-VSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMM 580
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
A +AQ+G+G +A+ +E ML T P +I++V+VLS
Sbjct: 581 AAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS------------------------ 616
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAAN 510
DLLGRAG L A+ LI+ MPF P + +A AA
Sbjct: 617 -----------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAK 665
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
++L ++ YV+LANIYA SG+ E VA +R+LM+ +G++K PG SWIEV ++HVF
Sbjct: 666 KLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFT 725
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAG----YVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
++ SHP I E++ LEEM +K++ G V + +HSEKLA AFGLLS
Sbjct: 726 VDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCAHRSQKYHSEKLAFAFGLLSLPPWM 785
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI V KNLR+C DCH IK +S + RE+ +RD +RFH FKDG CSC DYW
Sbjct: 786 PIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 255/553 (46%), Gaps = 80/553 (14%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
+ LHA + + + S +L N+ + +YS CG + A F + HAN+F++N +L A+
Sbjct: 23 ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFD 82
Query: 78 QLRIASARQLFDQIPQ--PDLVSYNTLISAYADCG----DTESALSLFKDMREKRFDTDG 131
R+ A LFD++P D VS+ T+IS Y G ++ +S+ +D + D
Sbjct: 83 SGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDP 142
Query: 132 FTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG--------F 179
F+ + + A +S L QLH I + NSL+ Y + G F
Sbjct: 143 FSYTCTMKACGCLASTRFAL--QLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVF 200
Query: 180 LD-----------------------EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
L+ EA VF M E +D VSWN+++ + Q+ G+ L
Sbjct: 201 LNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPE-RDHVSWNTLISVFSQYGHGIRCL 259
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
F EM +L + T S+L+A S+ DL G HA +++ ++ +GSGLID+Y
Sbjct: 260 STFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMY 319
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
AKC G + +VF + + + V W +ISG +Q D AL F ++ + D+ +
Sbjct: 320 AKC-GCLALARRVFNSLGEQNQVSWTCLISGVAQF-GLRDDALALFNQMRQASVVLDEFT 377
Query: 337 FVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED-------- 387
++ CS + + G+ +H IK + S + V NA++ MY++CG+ E
Sbjct: 378 LATILGVCSGQNYAATGELLHGYAIKSGMDS-FVPVGNAIITMYARCGDTEKASLAFRSM 436
Query: 388 -----------------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
AR+ FD MPE N ++ NSM++ Y QHG E ++L+
Sbjct: 437 PLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYV 496
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + P +TF + + ACA + G + S + FG + + ++ + R
Sbjct: 497 LMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTK-FGLSSDVSVANSIVTMYSRC 555
Query: 485 GKLTDAERLIEAM 497
G++ +A ++ +++
Sbjct: 556 GQIKEARKVFDSI 568
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 203/489 (41%), Gaps = 89/489 (18%)
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE-------------- 192
+ ++LH I G D + N+LL YS G +D+A RVF E
Sbjct: 22 IARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81
Query: 193 ------------------IKDEVSWNSMVVAYGQHREGLEALQLFQEMV-----SLQLGL 229
++D VSW +M+ Y Q+ +++ F M+ +Q
Sbjct: 82 DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQ-NC 140
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D ++ + A L LQ HAH+IK + I + L+D+Y KC G + V
Sbjct: 141 DPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKC-GAITLAETV 199
Query: 290 FEEIPQPDLVLWNTMISGYSQ------------------------------KEEYSDQAL 319
F I P L WN+MI GYSQ + + + L
Sbjct: 200 FLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCL 259
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ +G+ P+ ++ V+SAC+++S G +HA +++E S + + L+ M
Sbjct: 260 STFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRME-HSLDAFLGSGLIDM 318
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+KCG L ARR+F+ + E N VS +I+G AQ G+ +AL LF M + ++ T
Sbjct: 319 YAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTL 378
Query: 439 VSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
++L C+ A G+ +++ M F P G + +I + R G A +
Sbjct: 379 ATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVG---NAIITMYARCGDTEKASLAFRS 435
Query: 497 MP-------------FNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
MP F+ +A F + N + + + + Y G EE +
Sbjct: 436 MPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLY 495
Query: 544 RLMRDRGVQ 552
LMR + V+
Sbjct: 496 VLMRSKAVK 504
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 164/375 (43%), Gaps = 67/375 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL C DL G LHA L+ A+L + I +Y+KCGCL+ A FN
Sbjct: 276 TYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSL 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S+ L IS A G + AL+LF
Sbjct: 336 GEQNQVSWTCL-------------------------------ISGVAQFGLRDDALALFN 364
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-- 176
MR+ D FTL+ ++ S N + LH AI G D + V N+++T Y+R
Sbjct: 365 QMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCG 424
Query: 177 -----------------------------NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
NG +D A++ F M E ++ ++WNSM+ Y
Sbjct: 425 DTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPE-RNVITWNSMLSTYI 483
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
QH E ++L+ M S + D T A+ + A L + G Q +H+ K G +
Sbjct: 484 QHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVS 543
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + ++ +Y++C G +++ KVF+ I +L+ WN M++ ++Q ++A+ ++ + R
Sbjct: 544 VANSIVTMYSRC-GQIKEARKVFDSIHVKNLISWNAMMAAFAQN-GLGNKAIETYEDMLR 601
Query: 328 VGYHPDDCSFVCVIS 342
PD S+V V+S
Sbjct: 602 TECKPDHISYVAVLS 616
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 15/280 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C G+ TG+ LH +K+ + + N I +Y++CG A AF
Sbjct: 377 TLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSM 436
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+ ++ A+++ I ARQ FD +P+ +++++N+++S Y G +E + L+
Sbjct: 437 PLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYV 496
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR K D T + I A + +L IK Q+ G SV NS++T YSR
Sbjct: 497 LMRSKAVKPDWVTFATSIRACA-DLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRC 555
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + EA++VF + +K+ +SWN+M+ A+ Q+ G +A++ +++M+ + D + ++
Sbjct: 556 GQIKEARKVFDSI-HVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAV 614
Query: 238 LTAFTSLEDLVG--GLQFHAHLIKSG--FHQNSHIGSGLI 273
L+ DL+G GL A + G F N+ + L+
Sbjct: 615 LS------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALL 648
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 357/650 (54%), Gaps = 43/650 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM- 122
++ N L+ YA+ +++ A LFD++P+ ++VS++ L++ Y G + + L KDM
Sbjct: 65 SIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMI 124
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
E + + L+ I++ + + +Q H L + GF + V N+L++ YS+ +
Sbjct: 125 SEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIV 184
Query: 181 DEAKRVFYEMGEIKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+A V+ E+ + D V++NS++ V G REGLE L+ MVS + D T +
Sbjct: 185 QDAMGVWNEV-PVNDIVAYNSILSSLVENGYLREGLEVLR---SMVSESVKWDKVTFVNA 240
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ SL+DL GL H ++ S ++++ S +I++Y KC + VF+ + +
Sbjct: 241 FSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLM-ARGVFDGLQSRN 299
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIH 356
+VLW +++ Q + ++AL F K+ + ++ ++ +++AC+ LS G +H
Sbjct: 300 VVLWTAVMASCFQNGCF-EEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLH 358
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ K + + + V NAL+ MY+K G++E A+++F M + ++ N+MI G++ HG+G
Sbjct: 359 GHSEKSGFK-HHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLG 417
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+AL +F+ ML P +TF VLSAC H G V EG Y + FG +P EHY+C
Sbjct: 418 KKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTC 477
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSN 519
++ LL + G+L +A + P +A + A L+++P++
Sbjct: 478 IVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPND 537
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
Y +L+NIYA +W+ V +R+LMRD+ ++K+PG SWIE+ H+F +ED HP
Sbjct: 538 VGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDY 597
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
+ + ++E+ +K GY PD KE L +HSEKLA+A+GLL
Sbjct: 598 GQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEAS 657
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ILV+KNLRIC DCH+A++ IS + R I VRD RFH F+DGRCSC DYW
Sbjct: 658 ILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 43/321 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF C +DL G +H L + V AY+S+ I +Y KCG
Sbjct: 236 TFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCG------------ 283
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR +FD + ++V + ++++ G E AL+LF
Sbjct: 284 -------------------KSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFS 324
Query: 121 DMREKRFDTDGFTLSGLITA-----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
M ++ ++ FT + L+ A + N L LH + GF H+ V N+L+ Y+
Sbjct: 325 KMEQENVKSNEFTYAVLLNACAGLSARRNGSL---LHGHSEKSGFKHHVMVGNALINMYA 381
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
++G ++ AK+VF +M +D ++WN+M+ + H G +AL +FQ+M++ + + T
Sbjct: 382 KSGDIEAAKKVFSDMMH-RDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFT 440
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L+A L + G + HL+K G + ++ L +K +G + + P
Sbjct: 441 GVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSK-TGQLNEARNFMRTAP 499
Query: 295 -QPDLVLWNTMISGYSQKEEY 314
+ D+V W T+++ + Y
Sbjct: 500 VKWDVVAWRTLLNACHVHQNY 520
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 351 LGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+GK IH+ L + N I N+L+ Y+K + A LFDRMPE N VS ++++ G
Sbjct: 47 VGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTG 106
Query: 410 YAQHGIGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
Y +G ++ +RL + M+ E N+ P +S+C G+V EG++ ++ GF
Sbjct: 107 YLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKT-GFS 165
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAV---PYVM 525
+ ++ + + + DA + +P N + A N L N +
Sbjct: 166 FHNYVRNALVSMYSKCSIVQDAMGVWNEVPVND----IVAYNSILSSLVENGYLREGLEV 221
Query: 526 LANIYAASGKWEEVATI 542
L ++ + S KW++V +
Sbjct: 222 LRSMVSESVKWDKVTFV 238
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 353/653 (54%), Gaps = 43/653 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
VF N L++ YAR + AR++FD + D VS+N+L+S Y G E L +F MR
Sbjct: 148 GVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMR 207
Query: 124 EKRFDTDGFTLSGLITASSNN----LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ F L +I S + + +H + G D + ++++ Y++ G
Sbjct: 208 RCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGA 267
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-----HREGL-EALQLFQEMVSLQLGLDMYT 233
L EA +F + + + V +N+M+ + H+E + EAL L+ E+ S + +T
Sbjct: 268 LSEAVALFKSVLD-PNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFT 326
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+S++ A D+ G Q H ++K F + IGS LIDLY S M D + F +
Sbjct: 327 FSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFN-SACMEDGFRCFRSV 385
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
P+ D+V W MISG Q E + ++AL F +L VG PD + V++AC++L+ G
Sbjct: 386 PKQDVVTWTAMISGCVQNELF-ERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTG 444
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+Q+ K ++ N+ + MY++ GN+E A + F M H+ VS +++I+ +AQ
Sbjct: 445 EQMQCFATKSGF-DRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQ 503
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG +AL+ F M+ + P ITF+ VL+AC+H G V EG +Y+ +MK +G P +
Sbjct: 504 HGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVK 563
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQL 515
H +C++DLLGRAG+L DAE I F+ + ++ A+ ++L
Sbjct: 564 HCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMEL 623
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+P+++ YV L N+Y +G+ + IR LM++RGV+K+PG SWIE++ +H FVA D S
Sbjct: 624 QPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKS 683
Query: 576 HPMIKEIHNYLEEMSRKMKQAGY----------VPDKEKRLVH-HSEKLAVAFGLLSTSY 624
HP I+ L EM K+ + +E+ ++ HSEKLAVA G++
Sbjct: 684 HPECNAIYTKLAEMLSKIDKLTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQ 743
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCH+ +K IS REI +RD RFH F+DG CSCGDYW
Sbjct: 744 SAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 216/407 (53%), Gaps = 18/407 (4%)
Query: 64 NVFSFNVLLAAYAR--QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF-K 120
++F N LLAAY R AR+L D++P+ + VS+N LI AY+ G TE +L F
Sbjct: 44 SLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLH 103
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R D FT + + A S L K +H LA+ G V+NSL++ Y+R G
Sbjct: 104 AHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCG 163
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EA+RVF ++ E +D+VSWNS+V Y + E L++F M +GL+ + L S++
Sbjct: 164 DMGEARRVF-DVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVI 222
Query: 239 TAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ + V G+ H ++K+G + + S ++D+YAK G + + + +F+ + P
Sbjct: 223 KCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAK-RGALSEAVALFKSVLDP 281
Query: 297 DLVLWNTMISGYSQKE-----EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
++V++N MI+G + E E +AL + +L G P + +F VI AC NL+ +
Sbjct: 282 NVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRAC-NLAGDI 340
Query: 352 --GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GKQIH +K + + + +AL+ +Y +ED R F +P+ + V+ +MI+G
Sbjct: 341 EFGKQIHGQVLKHCFQGDDF-IGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISG 399
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
Q+ + AL LF +L + P T SV++ACA V G++
Sbjct: 400 CVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQ 446
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 167/346 (48%), Gaps = 32/346 (9%)
Query: 5 VLKTCVGRRDLVTG--KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
V+K C G V G +++H +K + +L++ + +Y+K G LS A F
Sbjct: 221 VIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLD 280
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
NV FN ++A R + ++V ALSL+ ++
Sbjct: 281 PNVVVFNAMIAGLCRD----------EAAVHKEVV---------------REALSLYSEL 315
Query: 123 REKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + + FT S +I A + ++ KQ+H + F + ++L+ Y + +
Sbjct: 316 QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACM 375
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++ R F + + +D V+W +M+ Q+ AL LF E++ + L D +T++S++ A
Sbjct: 376 EDGFRCFRSVPK-QDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNA 434
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
SL + G Q KSGF + + +G+ I +YA+ SG++ ++ F+E+ D+V
Sbjct: 435 CASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYAR-SGNVEAAIQRFQEMESHDVVS 493
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
W+ +IS ++Q + QAL F ++ P++ +F+ V++ACS+
Sbjct: 494 WSAIISSHAQ-HGCARQALQFFNEMVGAKVVPNEITFLGVLTACSH 538
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/604 (36%), Positives = 330/604 (54%), Gaps = 73/604 (12%)
Query: 137 LITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
++ S + + Q+H + G DH+ +N L Y+ G LD + +F G ++
Sbjct: 35 VLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALF---GRTQNP 91
Query: 197 VSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+ + +G GL +AL + +M++ + + +T +SIL L + G H
Sbjct: 92 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSIL----KLCPIEPGKALH 147
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV--------------- 299
+ +K GF + ++ +GL+D+YA+ GD+ ++F+ +P+ LV
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYAR-GGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGEL 206
Query: 300 ----------------LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
WN MI GY+Q ++AL F+++ + P++ + + V+SA
Sbjct: 207 DAARVLFDGMEERDGVCWNVMIDGYTQNG-MPNEALVLFRRMLKAKAKPNEVTVLSVLSA 265
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C L G+ +H+ I+ N + V ALV MYSKCG+LEDAR +FD++ + + V+
Sbjct: 266 CGQLGALESGRWVHSYIENNGIQFN-VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 324
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
NSMI GYA HG EAL+LF+ M + PTNITF+ +LSAC H+G V EG F+ MK
Sbjct: 325 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMK 384
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL- 506
D +G EP+ EHY CM++LLGRAG + A L++ M P G IAL
Sbjct: 385 DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALG 444
Query: 507 -KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
K + +N+ Y++L+NIYAA G W+ VA +R +M+D GV+K+PG S IEV +
Sbjct: 445 EKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNK 504
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKL 613
+H F+A +HP KEI+ LEE++ +K GY P +KE+ L HSEKL
Sbjct: 505 VHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKL 564
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFGL++T G I ++KNLR+C DCH K IS I GR+I VRD RFH F +G CSC
Sbjct: 565 AIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSC 624
Query: 674 GDYW 677
GDYW
Sbjct: 625 GDYW 628
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 10/309 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + GK+LH+ +K Y+ + +Y++ G + +A F+
Sbjct: 130 TFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 185
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S +L YA+ + +AR LFD + + D V +N +I Y G AL LF+
Sbjct: 186 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 245
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + + T+ +++A L + +H G V +L+ YS+ G
Sbjct: 246 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 305
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L++A+ VF ++ + KD V+WNSM+V Y H EALQLF+ M + L T IL
Sbjct: 306 SLEDARLVFDKIDD-KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGIL 364
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + G F+ + G +++L + +G + ++ + + +P
Sbjct: 365 SACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR-AGHVEQAYELVKNMNIEP 423
Query: 297 DLVLWNTMI 305
D VLW T++
Sbjct: 424 DPVLWGTLL 432
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 319/565 (56%), Gaps = 36/565 (6%)
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
L L+ Q+H I G+ S+ LL G + +++F + D + S++
Sbjct: 25 LYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPN-PDSFLFTSLIK 83
Query: 205 AYGQ-HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ + H + +L + MV + YT S++ + L L G H H++ GF
Sbjct: 84 STSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFG 143
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+ ++ + L+ LY KC GD+ + KVF++I + +V WN+MISGY Q ++ +A+G F
Sbjct: 144 LDVYVQAALVALYGKC-GDLINARKVFDKIRERSIVAWNSMISGYEQNG-FAKEAIGLFD 201
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
++ G PD +FV V+SAC++L SLG +H + + N + + +L+ MY +C
Sbjct: 202 RMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLN-VVLGTSLINMYIRC 260
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
GN+ AR +FD M E N V+ +MI+GY +G G +A+ LF M + P +ITFV+VL
Sbjct: 261 GNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVL 320
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI-EAMPFNP 501
SACAH G V EG++ F+ +++ + P EH C++D+LGRAG L +A I E +P NP
Sbjct: 321 SACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENP 380
Query: 502 GSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
L A A H L EP N YV+L+NIYA +G+ ++V +R
Sbjct: 381 APAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRN 440
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEK 604
M + ++K+ G+S +EV ++ ++F D SH I++YL+E+ K +AGYVP +
Sbjct: 441 NMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDS 500
Query: 605 ------------RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
L +HSEKLA+AFGLL TS+G PI ++KNLR+C DCH+AIKFISAI+
Sbjct: 501 VMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISS 560
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
REI VRD RFH FK G CSC DYW
Sbjct: 561 REIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K+C L G+ +H L + Y+ + LY KCG L
Sbjct: 113 TFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDL---------- 162
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+AR++FD+I + +V++N++IS Y G + A+ LF
Sbjct: 163 ---------------------INARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFD 201
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E + D T +++A ++ L +H + G D + SL+ Y R G
Sbjct: 202 RMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCG 261
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ VF M E ++ V+W +M+ YG + G +A++LF EM L + T ++L
Sbjct: 262 NVSKAREVFDSMKE-RNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVL 320
Query: 239 TA 240
+A
Sbjct: 321 SA 322
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
NV L+ Y R ++ AR++FD + + ++V++ +IS Y G A+ LF +MR
Sbjct: 246 NVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMR 305
Query: 124 EKRFDTDGFTL---------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ T +GL+ I++ + L G +H N L+
Sbjct: 306 RNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLV--PGVEH----NVCLVDML 359
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWN 200
R G LDEA IK+E+ N
Sbjct: 360 GRAGLLDEAYNF------IKEEIPEN 379
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/561 (38%), Positives = 325/561 (57%), Gaps = 57/561 (10%)
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-- 227
L+ Y++ L +A VF EM E ++ VSW +M+ AY Q +AL LF V + L
Sbjct: 284 LIVLYTKCDSLGDAHNVFDEMPE-RNVVSWTAMISAYSQRGYASQALNLFFADVKISLTG 342
Query: 228 --GLDM-----------------YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+D +T A++LT+ TS + G Q H+ +IK + + +
Sbjct: 343 VYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFV 402
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+YAK G + + VFE +P+ D+V +ISGY+Q ++AL F++L
Sbjct: 403 GSSLLDMYAK-DGKIHEARTVFECLPERDVVSCTAIISGYAQLG-LDEEALELFRRLQGE 460
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + ++ V++A S L+ LGKQ+H ++ EI S + + N+L+ MYSKCGNL
Sbjct: 461 GMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPS-FVVLQNSLIDMYSKCGNLTY 519
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACA 446
+RR+FD M E +S N+M+ GY++HG G E L+LF M E T + P ++T ++VLS C+
Sbjct: 520 SRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCS 579
Query: 447 HTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-- 503
H G +G F+ M EP+ EHY C++DLLGR+G++ +A I+ MPF P +
Sbjct: 580 HGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAI 639
Query: 504 ---------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
I A L++EP NA YV+L+N+YA++G+WE+V+++R LM
Sbjct: 640 WGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLK 699
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
+ V K+PG S IE+ + +H F A D SHP +EI ++E+S K+ GYVPD
Sbjct: 700 KTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHD 759
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KEK L+ HSEKLA++FGL+++ PI V+KNLRIC DCHN K+IS + GRE++
Sbjct: 760 VDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVS 819
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
+RD RFH G+CSC DYW
Sbjct: 820 LRDKNRFHRIVGGKCSCEDYW 840
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 192/402 (47%), Gaps = 52/402 (12%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + HAH+IK+ + + + + LI LY KC + D VF+E+P+ ++V W MIS YS
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS-LGDAHNVFDEMPERNVVSWTAMISAYS 320
Query: 310 QKEEYSDQALGCF---KKLNRVGYH------------------PDDCSFVCVISAC-SNL 347
Q+ Y+ QAL F K++ G + P++ +F V+++C S+L
Sbjct: 321 QR-GYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSL 379
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG+QIH+L IK+ + + V ++L+ MY+K G + +AR +F+ +PE + VS ++I
Sbjct: 380 GFILGRQIHSLIIKLNYE-DHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAII 438
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS--MMKDMF 465
+GYAQ G+ EAL LF + + +T+ VL+A + + G++ + + ++
Sbjct: 439 SGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIP 498
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVM 525
F + +ID+ + G LT + R+ + M + I+ A M
Sbjct: 499 SFVV---LQNSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNA----------------M 538
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L Y+ G+ EV + LMR+ K + + V ED + ++ +
Sbjct: 539 LVG-YSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSG 597
Query: 586 LEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEP 627
E+ KM+ G V D L+ S ++ AF + EP
Sbjct: 598 KIEVEPKMEHYGCVVD----LLGRSGRVEEAFEFIKKMPFEP 635
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 149/314 (47%), Gaps = 45/314 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C + G+ +H+L +K N
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIK-----------------------------LNYE 397
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H VF + LL YA+ +I AR +F+ +P+ D+VS +IS YA G E AL LF+
Sbjct: 398 DH--VFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFR 455
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + ++ T +G++TA S L L KQ+H + + + NSL+ YS+ G
Sbjct: 456 RLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCG 515
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASI 237
L ++R+F M E + +SWN+M+V Y +H EG E L+LF M ++ D T+ ++
Sbjct: 516 NLTYSRRIFDTMYE-RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAV 574
Query: 238 LTAFT--SLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L+ + LED GL + + H G ++DL + SG + + + ++
Sbjct: 575 LSGCSHGGLED--KGLNIFNDMSSGKIEVEPKMEHYGC-VVDLLGR-SGRVEEAFEFIKK 630
Query: 293 IP-QPDLVLWNTMI 305
+P +P +W +++
Sbjct: 631 MPFEPTAAIWGSLL 644
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/745 (32%), Positives = 374/745 (50%), Gaps = 103/745 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +L C+ DL G LHA+ +K ++SN + LY KCG L
Sbjct: 173 SFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD--------- 223
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
S QLFD++P D+ S+NT+IS+ E A LF+
Sbjct: 224 ----------------------SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFR 261
Query: 121 DMRE-KRFDTDGFTLSGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DMR F D FTLS ++ A+ ++ +++H I GF+ SV N+L+ Y++ G
Sbjct: 262 DMRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCG 321
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAY-------------------------------G 207
+ +F +M ++D ++W M+ AY
Sbjct: 322 SIKHVVALFEKM-RVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFC 380
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
Q+ EG +AL F MV + L +TL +L A L + Q H ++K GF N+
Sbjct: 381 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 440
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL--VLWNTMISGYSQKEEYSDQALGCFKKL 325
I + L+D+ +C G M D K+F + ++W +MI GY++ + ++A+ F +
Sbjct: 441 IEAALLDMCTRC-GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQ-PEEAISLFCQS 498
Query: 326 NRVGYHP-DDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
G D + V+ C L+ +GKQIH +K S+ + V N+++ MYSKC
Sbjct: 499 QLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSD-LGVGNSIITMYSKCS 557
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
N++DA ++F+ MP H+ VS N +IAG+ H G EAL ++ M + I P +TFV ++S
Sbjct: 558 NMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIIS 617
Query: 444 ACAHTGK--VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
A HT V ++ F MK ++ +P EHY+ ++ +LG G L +AE +I MP P
Sbjct: 618 AYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEP 677
Query: 502 -----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
+I +AA H L ++P + Y++++N+Y+A G+W +R
Sbjct: 678 EASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVRE 737
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--- 601
MR +G +K PG SWI + ++H F A D SHP K+IH+ LE + + +AGYVPD
Sbjct: 738 EMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSF 797
Query: 602 ---------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
K+ L +HS K+A +GLL T G PI ++KN+ +CGDCH +K++S + G
Sbjct: 798 VLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTG 857
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD HCF +G+CSC DYW
Sbjct: 858 REIFLRDASGHHCFLNGQCSCKDYW 882
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 213/426 (50%), Gaps = 45/426 (10%)
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFD 161
L++++ + + LS F + + + L ++ +++ LIK +H D
Sbjct: 47 LLTSHPPLSNQPALLSNFPSVSNDTVNDHYYLLD--LSVRYDDVELIKAVHASIFKLAED 104
Query: 162 HYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
+ + N+L+ Y + G + A +VF + + VS+ +M+ + + +A+++F
Sbjct: 105 IHLA--NALIVAYLKLGMVPNAYKVFVGL-SCPNVVSYTAMISGFAKSNRERQAMEIFFR 161
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M S + L+ ++ +ILT L DL G Q HA +IK GF + + + L+ LY KC G
Sbjct: 162 MRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKC-G 220
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCV 340
+ +++F+E+P D+ WNT+IS ++ Y ++A F+ + R+ G+ D + +
Sbjct: 221 YLDSVLQLFDEMPHRDIASWNTVISSVVKEMMY-ERAFELFRDMRRIDGFRIDHFTLSTI 279
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED------------- 387
+ A L+ +G++IHA IKI SN ISV NAL+ Y+KCG+++
Sbjct: 280 LVAARGLASMVGREIHAHVIKIGFESN-ISVINALIRFYTKCGSIKHVVALFEKMRVRDV 338
Query: 388 ------------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
A +FD+MP N++S N++++G+ Q+G G +AL F M+E
Sbjct: 339 ITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEE 398
Query: 430 NIPPTNITFVSVLSACA--HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ T+ T VL+AC K+++ F + FGF + ++D+ R G++
Sbjct: 399 GVELTDFTLTGVLNACGLLMEAKISKQIHGFIL---KFGFGSNACIEAALLDMCTRCGRM 455
Query: 488 TDAERL 493
DA+++
Sbjct: 456 ADAQKM 461
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 225/482 (46%), Gaps = 51/482 (10%)
Query: 62 HANVFSF-------NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA++F N L+ AY + + +A ++F + P++VSY +IS +A
Sbjct: 95 HASIFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQ 154
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F MR + + F+ ++T +L L QLH + I GF +Y V+N+L+
Sbjct: 155 AMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMG 214
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDM 231
Y + G+LD ++F EM +D SWN+++ + + A +LF++M + +D
Sbjct: 215 LYGKCGYLDSVLQLFDEMPH-RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDH 273
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+TL++IL A L +VG + HAH+IK GF N + + LI Y KC G ++ + +FE
Sbjct: 274 FTLSTILVAARGLASMVGR-EIHAHVIKIGFESNISVINALIRFYTKC-GSIKHVVALFE 331
Query: 292 EIPQPDLVLWNTMI-------------------------------SGYSQKEEYSDQALG 320
++ D++ W MI SG+ Q E S +AL
Sbjct: 332 KMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGS-KALA 390
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ G D + V++AC L + KQIH +K SN + AL+ M
Sbjct: 391 FFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNA-CIEAALLDMC 449
Query: 380 SKCGNLEDARRLFDRMPEHNTVSL--NSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNI 436
++CG + DA+++F + + S+ SMI GYA++ EA+ LF + LE + +
Sbjct: 450 TRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKV 509
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
+VL C T E K GF + + +I + + + DA ++
Sbjct: 510 ASTAVLGVCG-TLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNV 568
Query: 497 MP 498
MP
Sbjct: 569 MP 570
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/713 (33%), Positives = 356/713 (49%), Gaps = 73/713 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL C L G+ +H ++ + +++ + +Y +CG L A
Sbjct: 130 VFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA------- 182
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N L R L D+V +N +I+A + G AL +F
Sbjct: 183 --------NALFGHLERHL---------------DVVLWNAMITANSQNGSPREALEIFY 219
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL----IKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M + D T + A S++ L +K H G V +L+ Y+R
Sbjct: 220 RMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYAR 279
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D A+ F M E ++ VSW SM+ A+ Q L A++ F M+ L + T ++
Sbjct: 280 CGEIDCAREFFAAMPE-RNAVSWTSMIAAFAQIGH-LLAVETFHAML---LEGVVPTRST 334
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF--EEIP 294
+ A EDL A + G + I + L+ YA+C G D ++VF E
Sbjct: 335 LFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQ-EDAIRVFSAREEG 393
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ D L MI+ Y+Q + + R G PD ++ + AC++L+ S G+
Sbjct: 394 EWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER-GISPDRILYITALDACASLAALSEGR 452
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIHA +++ NA+V+MY +CG+L DAR FD MP + +S N+M++ AQH
Sbjct: 453 QIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQH 512
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G + LF ML+ + F+++LSACAH G V G ++FS M G P EH
Sbjct: 513 GRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEH 572
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS---IALK--------------AANHFLQLE 516
Y CM+DLLGR G+L DA +++AMP P + +AL AA L+L
Sbjct: 573 YGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELR 632
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
++ YV L NIY+A+G+WE+ A +R++M D G++K PG S IE++ ++H FV D SH
Sbjct: 633 ANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSH 692
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSY 624
P + I+ LE + +++AGY KE+ L HSEKLA+AFG++ST
Sbjct: 693 PQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQ 752
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V+KNLR+C DCHNA KFIS + GREI VRD RFH FKDG CSCGDYW
Sbjct: 753 GSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 208/436 (47%), Gaps = 16/436 (3%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y R + SA +F +I +V + LISAY G + +A++LF + ++ D
Sbjct: 68 LVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALD 127
Query: 131 GFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+++A S+ L + +H A+ G V ++L++ Y R G L +A +F
Sbjct: 128 AIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFG 187
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL- 247
+ D V WN+M+ A Q+ EAL++F M+ L + D+ T S+ A +S L
Sbjct: 188 HLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLR 247
Query: 248 ---VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
V G FH L ++G + + + L++ YA+C G++ + F +P+ + V W +M
Sbjct: 248 ASQVKG--FHTCLDETGLGSDVVVATALVNAYARC-GEIDCAREFFAAMPERNAVSWTSM 304
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
I+ ++Q A+ F + G P + + C +L + + + A+ +I +
Sbjct: 305 IAAFAQIGHL--LAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTA--RLVEAIAQEIGV 360
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH--NTVSLNSMIAGYAQHGIGMEALRL 422
++ +++ LV Y++C EDA R+F E + + +MIA YAQ +L
Sbjct: 361 ATD-VAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKL 419
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
+ +E I P I +++ L ACA ++EG++ + + + + + ++ + G
Sbjct: 420 WGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYG 479
Query: 483 RAGKLTDAERLIEAMP 498
+ G L DA + MP
Sbjct: 480 QCGSLRDARDAFDGMP 495
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 333 DDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + V ++ C++++ GK +H+ + S + ++LV MY +CG+LE A +F
Sbjct: 28 DSAAAVRLVRECNSIAR--GKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVF 85
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
++ + V +I+ Y G A+ LF +L+ I I FVSVLSAC+ +A
Sbjct: 86 HKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLA 145
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
G+ + G + S ++ + GR G L DA L
Sbjct: 146 AGRLIHRCAVEA-GLGLQEIVASALVSMYGRCGSLRDANAL 185
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/745 (32%), Positives = 374/745 (50%), Gaps = 103/745 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +L C+ DL G LHA+ +K ++SN + LY KCG L
Sbjct: 191 SFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD--------- 241
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
S QLFD++P D+ S+NT+IS+ E A LF+
Sbjct: 242 ----------------------SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFR 279
Query: 121 DMRE-KRFDTDGFTLSGLITASSNNLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DMR F D FTLS ++ A+ ++ +++H I GF+ SV N+L+ Y++ G
Sbjct: 280 DMRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCG 339
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYG------------------------------- 207
+ +F +M ++D ++W M+ AY
Sbjct: 340 SIKHVVALFEKM-RVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFC 398
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
Q+ EG +AL F MV + L +TL +L A L + Q H ++K GF N+
Sbjct: 399 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 458
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL--VLWNTMISGYSQKEEYSDQALGCFKKL 325
I + L+D+ +C G M D K+F + ++W +MI GY++ + ++A+ F +
Sbjct: 459 IEAALLDMCTRC-GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQ-PEEAISLFCQS 516
Query: 326 NRVGYHP-DDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
G D + V+ C L+ +GKQIH +K S+ + V N+++ MYSKC
Sbjct: 517 QLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSD-LGVGNSIITMYSKCS 575
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
N++DA ++F+ MP H+ VS N +IAG+ H G EAL ++ M + I P +TFV ++S
Sbjct: 576 NMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIIS 635
Query: 444 ACAHTGK--VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
A HT V ++ F MK ++ +P EHY+ ++ +LG G L +AE +I MP P
Sbjct: 636 AYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEP 695
Query: 502 -----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
+I +AA H L ++P + Y++++N+Y+A G+W +R
Sbjct: 696 EASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVRE 755
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--- 601
MR +G +K PG SWI + ++H F A D SHP K+IH+ LE + + +AGYVPD
Sbjct: 756 EMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSF 815
Query: 602 ---------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
K+ L +HS K+A +GLL T G PI ++KN+ +CGDCH +K++S + G
Sbjct: 816 VLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTG 875
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD HCF +G+CSC DYW
Sbjct: 876 REIFLRDASGHHCFLNGQCSCKDYW 900
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 213/426 (50%), Gaps = 45/426 (10%)
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFD 161
L++++ + + LS F + + + L ++ +++ LIK +H D
Sbjct: 65 LLTSHPPLSNQPALLSNFPSVSNDTVNDHYYLLD--LSVRYDDVELIKAVHASIFKLAED 122
Query: 162 HYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
+ + N+L+ Y + G + A +VF + + VS+ +M+ + + +A+++F
Sbjct: 123 IHLA--NALIVAYLKLGMVPNAYKVFVGL-SCPNVVSYTAMISGFAKSNRERQAMEIFFR 179
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M S + L+ ++ +ILT L DL G Q HA +IK GF + + + L+ LY KC G
Sbjct: 180 MRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKC-G 238
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCV 340
+ +++F+E+P D+ WNT+IS ++ Y ++A F+ + R+ G+ D + +
Sbjct: 239 YLDSVLQLFDEMPHRDIASWNTVISSVVKEMMY-ERAFELFRDMRRIDGFRIDHFTLSTI 297
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED------------- 387
+ A L+ +G++IHA IKI SN ISV NAL+ Y+KCG+++
Sbjct: 298 LVAARGLASMVGREIHAHVIKIGFESN-ISVINALIRFYTKCGSIKHVVALFEKMRVRDV 356
Query: 388 ------------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
A +FD+MP N++S N++++G+ Q+G G +AL F M+E
Sbjct: 357 ITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEE 416
Query: 430 NIPPTNITFVSVLSACA--HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ T+ T VL+AC K+++ F + FGF + ++D+ R G++
Sbjct: 417 GVELTDFTLTGVLNACGLLMEAKISKQIHGFIL---KFGFGSNACIEAALLDMCTRCGRM 473
Query: 488 TDAERL 493
DA+++
Sbjct: 474 ADAQKM 479
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 225/482 (46%), Gaps = 51/482 (10%)
Query: 62 HANVFSF-------NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
HA++F N L+ AY + + +A ++F + P++VSY +IS +A
Sbjct: 113 HASIFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQ 172
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F MR + + F+ ++T +L L QLH + I GF +Y V+N+L+
Sbjct: 173 AMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMG 232
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDM 231
Y + G+LD ++F EM +D SWN+++ + + A +LF++M + +D
Sbjct: 233 LYGKCGYLDSVLQLFDEMPH-RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDH 291
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+TL++IL A L +VG + HAH+IK GF N + + LI Y KC G ++ + +FE
Sbjct: 292 FTLSTILVAARGLASMVGR-EIHAHVIKIGFESNISVINALIRFYTKC-GSIKHVVALFE 349
Query: 292 EIPQPDLVLWNTMI-------------------------------SGYSQKEEYSDQALG 320
++ D++ W MI SG+ Q E S +AL
Sbjct: 350 KMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGS-KALA 408
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ G D + V++AC L + KQIH +K SN + AL+ M
Sbjct: 409 FFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNA-CIEAALLDMC 467
Query: 380 SKCGNLEDARRLFDRMPEHNTVSL--NSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNI 436
++CG + DA+++F + + S+ SMI GYA++ EA+ LF + LE + +
Sbjct: 468 TRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKV 527
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
+VL C T E K GF + + +I + + + DA ++
Sbjct: 528 ASTAVLGVCG-TLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNV 586
Query: 497 MP 498
MP
Sbjct: 587 MP 588
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/666 (33%), Positives = 362/666 (54%), Gaps = 47/666 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H ++F L+ Y++ + SA ++FD +P+ ++ ++ TL++ Y
Sbjct: 83 HIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLL 142
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
AL LF M E +TL ++ A S+ ++ KQ+H I D S+ NSL +
Sbjct: 143 ALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSS 202
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ L+ A + F + E KD +SW S++ + + + +L F +M+S + + Y
Sbjct: 203 FYSKFRRLEFAIKAFKIIKE-KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEY 261
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S+L+A + L G Q H+ IK G+ + I + ++ LY KC G + + K+FE
Sbjct: 262 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKC-GWLIEAQKLFEG 320
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQ----------ALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +LV WN MI+G+++ + ++ AL F+KL R G PD +F V+S
Sbjct: 321 METLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLS 380
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
CSNL + G+QIH IK + ++ + V ALV+MY+KCG+++ A + F MP +
Sbjct: 381 VCSNLVALEQGEQIHGQIIKSGVLAD-VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMI 439
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S SMI G+A+HG+ +AL+LFE M I P +TFV VLSAC+H G E YF +M
Sbjct: 440 SWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELM 499
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSI 504
+ + +P +H++C+ID+ R G++ +A ++ M F P +
Sbjct: 500 QKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDL 559
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA L+L+P + YV L N++ ++G+W++V+ +R+LM++ V K +SWI +K+
Sbjct: 560 GFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKE 619
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE--------------KRLVHHS 610
+++ F D SH E++ LE + ++K GY P ++ V HS
Sbjct: 620 KVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHS 679
Query: 611 EKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
EKLA+AFGLL+ PI V+K++ +C DCHN I+FIS + GREI +RD+ + H F +G
Sbjct: 680 EKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGY 739
Query: 671 CSCGDY 676
CSCG Y
Sbjct: 740 CSCGGY 745
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 185/362 (51%), Gaps = 17/362 (4%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+ +H + GF V L+ YS+ G ++ A +VF + ++ +W +++ Y Q
Sbjct: 78 RMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPR-RNVNAWTTLLTGYVQ 136
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ L ALQLF +M+ YTL +L A +SL+ + G Q HA+LIK ++ I
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ L Y+K + +K F+ I + D++ W ++IS + + ++L F +
Sbjct: 197 GNSLSSFYSKFR-RLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ-AARSLSFFMDMLSD 254
Query: 329 GYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G P++ + V+SAC L+ LG QIH+L+IK+ S+ I + N+++ +Y KCG L +
Sbjct: 255 GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS-ILIKNSIMYLYLKCGWLIE 313
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQ-----------HGIGMEALRLFEWMLETNIPPTNI 436
A++LF+ M N V+ N+MIAG+A+ H G AL +F+ + + + P
Sbjct: 314 AQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLF 373
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TF SVLS C++ + +G++ + G + + ++ + + G + A +
Sbjct: 374 TFSSVLSVCSNLVALEQGEQIHGQIIKS-GVLADVVVGTALVSMYNKCGSIDKASKAFLE 432
Query: 497 MP 498
MP
Sbjct: 433 MP 434
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G +H+L +K S + N + LY KCG L A F
Sbjct: 262 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 321
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N+ ++N ++A +A+ + +A + D+ ++ + G T AL++F+
Sbjct: 322 ETLNLVTWNAMIAGHAKMMDLA----------EDDVAAHKS--------GST--ALAMFQ 361
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ D FT S +++ SN + L + Q+H I G V +L++ Y++ G
Sbjct: 362 KLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCG 421
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A + F EM + +SW SM+ + +H +ALQLF++M + + + T +L
Sbjct: 422 SIDKASKAFLEMPS-RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 480
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S L ++ L++ ++ + + LID+Y + G + + V ++ +
Sbjct: 481 SA-CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRL-GRVEEAFDVVHKMNFE 538
Query: 296 PDLVLWNTMISG 307
P+ +W+ +I+G
Sbjct: 539 PNETIWSMLIAG 550
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 325/562 (57%), Gaps = 37/562 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H CGF N L++ Y++ G LDEA+ +F + E + VSW++M+ AY
Sbjct: 5 RRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILE-RTVVSWSAMIGAYAL 63
Query: 209 HREGLEALQLFQEMVS-LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
H G EAL LF M + ++ + T + A +EDL G + HA + SG ++S+
Sbjct: 64 HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123
Query: 268 --IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+ + L+++Y +C G + + KVF+ + PD W +MI+ ++ E +AL F ++
Sbjct: 124 AILENALLNMYVRC-GSLEEARKVFDTMDHPDAFSWTSMITACTENCELL-EALELFHRM 181
Query: 326 NRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
N G P + V++AC+ + + +GKQIH+ S+ + AL+ MY+KCG+
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSS-VLAQTALLDMYAKCGS 240
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
LE + ++F M N+VS +MIA AQHG G EAL LF+ M + TF+ VL A
Sbjct: 241 LECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRA 300
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
C+H G + E ++F M + + P HY +D +GRAG+L DAE LI +MPF+P ++
Sbjct: 301 CSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETL 360
Query: 505 -----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
A K A +L P +++ Y +L N+YAA+G++ + +R+ M
Sbjct: 361 TWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMT 420
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
DRG++K PG S+IEVK ++H FVA D +HP EI LE++ +M++AGYVP
Sbjct: 421 DRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLH 480
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+KE+ + HSEKLA+AFGL++T G P+L++KNLR+C DCH A K I+ I R I
Sbjct: 481 AVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRI 540
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRDT+RFH F+DG+CSC DYW
Sbjct: 541 VVRDTHRFHHFEDGQCSCKDYW 562
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 202/411 (49%), Gaps = 15/411 (3%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H + N L++ YA+ + AR +F+ I + +VS++ +I AYA G + AL LF
Sbjct: 17 HRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHR 76
Query: 122 MR-EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCG--FDHYASVNNSLLTCYSR 176
MR + R + + T +G+ A +L +++H LA+ G A + N+LL Y R
Sbjct: 77 MRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVR 136
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+EA++VF M D SW SM+ A ++ E LEAL+LF M + TLAS
Sbjct: 137 CGSLEEARKVFDTMDH-PDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLAS 195
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A L G Q H+ L SGFH + + L+D+YAKC G + KVF +
Sbjct: 196 VLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKC-GSLECSSKVFTAMETR 254
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN---LSPSLGK 353
+ V W MI+ +Q + D+AL FK++N G D +F+CV+ ACS+ + SL +
Sbjct: 255 NSVSWTAMIAALAQHGQ-GDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESL-E 312
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH-NTVSLNSMIAGYAQ 412
H++ I AL + + G L+DA L MP H T++ +++
Sbjct: 313 FFHSMVEDYAIAPTETHYCRALDTI-GRAGRLQDAEELIHSMPFHPETLTWKTLLNACRI 371
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
H A ++ E +L P ++ + + + A TG+ + + M D
Sbjct: 372 HSQAERATKVAE-LLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTD 421
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 6/251 (2%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + H+ L GFH+ + +GL+ +YAKC G + + +F I + +V W+ MI Y+
Sbjct: 4 GRRIHSRLSLCGFHRATIAQNGLVSMYAKC-GCLDEARAIFNGILERTVVSWSAMIGAYA 62
Query: 310 QKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI-EIRS 366
+AL F ++ G P+ +F V +AC + G++IHAL + E++S
Sbjct: 63 LHGR-GQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKS 121
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + NAL+ MY +CG+LE+AR++FD M + S SMI ++ +EAL LF M
Sbjct: 122 SNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRM 181
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
IPPT++T SVL+ACA +G + G++ S + D GF + ++D+ + G
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRL-DASGFHSSVLAQTALLDMYAKCGS 240
Query: 487 LTDAERLIEAM 497
L + ++ AM
Sbjct: 241 LECSSKVFTAM 251
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 44/328 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN--LVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF V C DL G+ +HAL + + L +A L N + +Y +CG L
Sbjct: 89 TFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLE------- 141
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
AR++FD + PD S+ ++I+A + + AL L
Sbjct: 142 ------------------------EARKVFDTMDHPDAFSWTSMITACTENCELLEALEL 177
Query: 119 FKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M + TL+ ++ A S L + KQ+H GF +LL Y++
Sbjct: 178 FHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAK 237
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+ + +VF M E ++ VSW +M+ A QH +G EAL+LF+EM + D T
Sbjct: 238 CGSLECSSKVFTAM-ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFIC 296
Query: 237 ILTAFTSLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L A + + L+F +++ + +H L D + +G ++D ++ +P
Sbjct: 297 VLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRAL-DTIGR-AGRLQDAEELIHSMP 354
Query: 295 -QPDLVLWNTMISG---YSQKEEYSDQA 318
P+ + W T+++ +SQ E + A
Sbjct: 355 FHPETLTWKTLLNACRIHSQAERATKVA 382
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/666 (33%), Positives = 362/666 (54%), Gaps = 47/666 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H ++F L+ Y++ + SA ++FD +P+ ++ ++ TL++ Y
Sbjct: 89 HIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLL 148
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
AL LF M E +TL ++ A S+ ++ KQ+H I D S+ NSL +
Sbjct: 149 ALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSS 208
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ L+ A + F + E KD +SW S++ + + + +L F +M+S + + Y
Sbjct: 209 FYSKFRRLEFAIKAFKIIKE-KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEY 267
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S+L+A + L G Q H+ IK G+ + I + ++ LY KC G + + K+FE
Sbjct: 268 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKC-GWLIEAQKLFEG 326
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQ----------ALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +LV WN MI+G+++ + ++ AL F+KL R G PD +F V+S
Sbjct: 327 METLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLS 386
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
CSNL + G+QIH IK + ++ + V ALV+MY+KCG+++ A + F MP +
Sbjct: 387 VCSNLVALEQGEQIHGQIIKSGVLAD-VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMI 445
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S SMI G+A+HG+ +AL+LFE M I P +TFV VLSAC+H G E YF +M
Sbjct: 446 SWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELM 505
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSI 504
+ + +P +H++C+ID+ R G++ +A ++ M F P +
Sbjct: 506 QKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDL 565
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA L+L+P + YV L N++ ++G+W++V+ +R+LM++ V K +SWI +K+
Sbjct: 566 GFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKE 625
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE--------------KRLVHHS 610
+++ F D SH E++ LE + ++K GY P ++ V HS
Sbjct: 626 KVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHS 685
Query: 611 EKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
EKLA+AFGLL+ PI V+K++ +C DCHN I+FIS + GREI +RD+ + H F +G
Sbjct: 686 EKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGY 745
Query: 671 CSCGDY 676
CSCG Y
Sbjct: 746 CSCGGY 751
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 185/362 (51%), Gaps = 17/362 (4%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+ +H + GF V L+ YS+ G ++ A +VF + ++ +W +++ Y Q
Sbjct: 84 RMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPR-RNVNAWTTLLTGYVQ 142
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ L ALQLF +M+ YTL +L A +SL+ + G Q HA+LIK ++ I
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 202
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ L Y+K + +K F+ I + D++ W ++IS + + ++L F +
Sbjct: 203 GNSLSSFYSKFR-RLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ-AARSLSFFMDMLSD 260
Query: 329 GYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G P++ + V+SAC L+ LG QIH+L+IK+ S+ I + N+++ +Y KCG L +
Sbjct: 261 GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS-ILIKNSIMYLYLKCGWLIE 319
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQ-----------HGIGMEALRLFEWMLETNIPPTNI 436
A++LF+ M N V+ N+MIAG+A+ H G AL +F+ + + + P
Sbjct: 320 AQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLF 379
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TF SVLS C++ + +G++ + G + + ++ + + G + A +
Sbjct: 380 TFSSVLSVCSNLVALEQGEQIHGQIIKS-GVLADVVVGTALVSMYNKCGSIDKASKAFLE 438
Query: 497 MP 498
MP
Sbjct: 439 MP 440
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G +H+L +K S + N + LY KCG L A F
Sbjct: 268 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 327
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N+ ++N ++A +A+ + +A + D+ ++ + G T AL++F+
Sbjct: 328 ETLNLVTWNAMIAGHAKMMDLA----------EDDVAAHKS--------GST--ALAMFQ 367
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ D FT S +++ SN + L + Q+H I G V +L++ Y++ G
Sbjct: 368 KLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCG 427
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A + F EM + +SW SM+ + +H +ALQLF++M + + + T +L
Sbjct: 428 SIDKASKAFLEMPS-RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 486
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S L ++ L++ ++ + + LID+Y + G + + V ++ +
Sbjct: 487 SA-CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRL-GRVEEAFDVVHKMNFE 544
Query: 296 PDLVLWNTMISG 307
P+ +W+ +I+G
Sbjct: 545 PNETIWSMLIAG 556
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/673 (33%), Positives = 351/673 (52%), Gaps = 66/673 (9%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQP------DLVSYNTLISAYADCGDTESALSLF 119
F FN LL+ YAR + A+ LF D+V++NT+IS G A+ +
Sbjct: 211 FPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVL 270
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIY-CGFDHYASVNNSLLTCYSR 176
DM DG T + + A S L L +++H + + + V ++L+ Y+
Sbjct: 271 YDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAG 330
Query: 177 NGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTL 234
N + A+RVF + E ++ WN+M+ Y Q EAL+LF M T+
Sbjct: 331 NEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTM 390
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +L A E G H +++K G N + + L+D+YA+ G+M ++F I
Sbjct: 391 SGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARL-GEMDVARRIFAMID 449
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH----------------PDDCSFV 338
D+V WNT+I+G + ++ +A ++ P++ + +
Sbjct: 450 PRDVVSWNTLITG-CVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLM 508
Query: 339 CVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
++ C+ L+ P+ GK+IH ++ + S+ I+V +ALV MY+KCG L +R +FDR+P
Sbjct: 509 TLLPGCAALAAPARGKEIHGYAVRHALESD-IAVGSALVDMYAKCGCLAASRAVFDRLPR 567
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQK 456
N ++ N +I Y HG+G EA+ LF+ M P +TF++ L+AC+H+G V G +
Sbjct: 568 RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLE 627
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
F M+ G +P + ++C++D+LGRAG+L +A +I +M PG
Sbjct: 628 LFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSM--EPGEQQVSAWSSLLGAC 685
Query: 504 -------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
+ AA +LEP A YV+L NIY+A+G W++ +R MR +GV K+PG
Sbjct: 686 RLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPG 745
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEK 604
SWIE+ +H F+A + SHP E+H +++ + +M++ GY PD K
Sbjct: 746 CSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAA 805
Query: 605 RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFH 664
L +HSEKLA+AFGLL G I V KNLR+C DCH A KF+S + GR+I +RD RFH
Sbjct: 806 MLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFH 865
Query: 665 CFKDGRCSCGDYW 677
F+DG CSCGDYW
Sbjct: 866 HFRDGSCSCGDYW 878
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 215/467 (46%), Gaps = 41/467 (8%)
Query: 69 NVLLAAYAR--QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REK 125
N LL AYAR L A A D VSYN+LISA E AL +DM E
Sbjct: 104 NALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEG 163
Query: 126 RFDTDGFTLSGLITASS-----NNLCLIKQLHCLAIYCGFDHYASVN---NSLLTCYSRN 177
R D FTL ++ A S + L ++ H A+ GF N+LL+ Y+R
Sbjct: 164 RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARL 223
Query: 178 GFLDEAKRVFYEMGEI-----KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
G +D+A+ +F D V+WN+M+ Q EA+++ +MVSL + D
Sbjct: 224 GLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGV 283
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T AS L A + LE L G + HA ++K NS + S L+D+YA + + +VF+
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAG-NEKVASARRVFD 342
Query: 292 EIPQPD--LVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLS 348
+P+P L +WN MI GY+Q ++AL F ++ G P + + V+ AC+
Sbjct: 343 MVPEPSRQLGMWNAMICGYAQA-GMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE 401
Query: 349 PSLGKQ-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
GK+ +H +K + NR V NAL+ MY++ G ++ ARR+F + + VS N++I
Sbjct: 402 GFAGKEAMHGYVVKRGMAGNRF-VQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLI 460
Query: 408 AGYAQHGIGMEALRLFEWML----------------ETNIPPTNITFVSVLSACAHTGKV 451
G G EA +L M P NIT +++L CA
Sbjct: 461 TGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAP 520
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
A G++ E + S ++D+ + G L + + + +P
Sbjct: 521 ARGKEIHGYAV-RHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP 566
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 55/368 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L G+ +HA+ LK+ A L+
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKD-----ADLA----------------------- 315
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSL 118
AN F + L+ YA ++ASAR++FD +P+P L +N +I YA G E AL L
Sbjct: 316 --ANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALEL 373
Query: 119 FKDMR-EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F M E T+SG++ A S + +H + G V N+L+ Y+
Sbjct: 374 FSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYA 433
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM----------VSL 225
R G +D A+R+F M + +D VSWN+++ EA QL EM +
Sbjct: 434 RLGEMDVARRIF-AMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTT 492
Query: 226 QLG------LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+ G + TL ++L +L G + H + ++ + +GS L+D+YAKC
Sbjct: 493 EEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKC 552
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFV 338
G + VF+ +P+ +++ WN +I Y D+A+ F ++ G P++ +F+
Sbjct: 553 -GCLAASRAVFDRLPRRNVITWNVLIMAYGM-HGLGDEAVALFDEMAAGGEATPNEVTFI 610
Query: 339 CVISACSN 346
++ACS+
Sbjct: 611 AALAACSH 618
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 174/370 (47%), Gaps = 35/370 (9%)
Query: 150 QLHCLAIYCGFDHYAS--VNNSLLTCYSRNG-FLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
LH A+ H S V N+LLT Y+R G E++D VS+NS++ A
Sbjct: 84 SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143
Query: 207 GQHREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVG---GLQFHAHLIKSGF 262
R+ AL ++M++ + + +TL S+L A + L G G + HA +K GF
Sbjct: 144 CLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF 203
Query: 263 HQNSHIG---SGLIDLYAKCSGDMRDCMKVFEEIPQP------DLVLWNTMISGYSQKEE 313
+ L+ +YA+ G + D +F D+V WNTMIS Q
Sbjct: 204 LDEGRERFPFNALLSMYARL-GLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGR 262
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+ +A+ + +G PD +F + ACS L +LG+++HA+ +K + V
Sbjct: 263 CA-EAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVA 321
Query: 373 NALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIAGYAQHGIGMEALRLFEWM-LET 429
+ALV MY+ + ARR+FD +PE N+MI GYAQ G+ EAL LF M E
Sbjct: 322 SALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEA 381
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE----GEHY--SCMIDLLGR 483
P+ T VL ACA + EG F+ + M G+ + G + + ++D+ R
Sbjct: 382 GCAPSETTMSGVLPACARS----EG---FAGKEAMHGYVVKRGMAGNRFVQNALMDMYAR 434
Query: 484 AGKLTDAERL 493
G++ A R+
Sbjct: 435 LGEMDVARRI 444
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 38/216 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+A+ F++
Sbjct: 506 TLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRL 565
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
NV ++NVL+ AY A LFD++ P+ V++ ++A + G +
Sbjct: 566 PRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRG 625
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF M G+ + C++ L
Sbjct: 626 LELFHGMERDH---------GVKPTPDLHACVVDVL-----------------------G 653
Query: 176 RNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHR 210
R G LDEA + M + +VS W+S++ A HR
Sbjct: 654 RAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHR 689
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/640 (35%), Positives = 364/640 (56%), Gaps = 39/640 (6%)
Query: 71 LLAAYARQLRIASARQ-LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RFD 128
L AAYAR +A+A L + ++N +I+A++ G SAL +F+ + R D
Sbjct: 48 LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALPPAARPD 107
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+ FTL+ A +L + + A G+ V +SLL Y+R G + +A +VF
Sbjct: 108 STTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFD 167
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M +D V+W++MV + + L+A+Q+++ M + D + ++ A T+ ++
Sbjct: 168 RMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H HL++ G + + L+D+YAK +G + +VF + + V W+ MISG+
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAK-NGLLDVACRVFGLMVHRNDVSWSAMISGF 285
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSN 367
+Q + SD+AL F+ + G PD + V + ACSN+ LG+ +H ++ N
Sbjct: 286 AQNGQ-SDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFN 343
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
I + A + MYSKCG+L A+ LF+ + + + + N+MIA HG G +AL LF+ M
Sbjct: 344 CI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMN 402
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
ET + P + TF S+LSA +H+G V EG+ +F M + F P +HY C++DLL R+G +
Sbjct: 403 ETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLV 462
Query: 488 TDAERLIEAMPFNPGSIAL------------------KAANHFLQLEPSNAVPYVMLANI 529
+A L+ +M P ++A+ A++ L+L+P + +++N+
Sbjct: 463 EEASDLLTSMKAEP-TVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
YAA+ KW++V +R+LM+D G +K PG S IE++ H F+ ED SHP +EI + + ++
Sbjct: 522 YAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKL 581
Query: 590 SRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
+M++ GY+P KE++L +HSEKLA+AFGLL+T G ++++KNLR+C
Sbjct: 582 DLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVC 641
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH+AIK+IS IA REI VRD RFH FKDG CSC DYW
Sbjct: 642 GDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 173/352 (49%), Gaps = 18/352 (5%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+ +LH L I + + +SL Y+R G L A+ +WN+++ A+
Sbjct: 27 LARLHALLIVSSSATHTLI-SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ AL++F+ + D T L+A L DL GG +G+ +
Sbjct: 86 RRGSPASALRVFRALPPAARP-DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ S L+ LYA+ G M D +KVF+ +P+ D V W+TM++G+ + D A+ ++++
Sbjct: 145 VCSSLLHLYARW-GAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLD-AIQMYRRMRE 202
Query: 328 VGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G D+ + VI AC+ + +G +H ++ +R + ++ + LV MY+K G L+
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATS-LVDMYAKNGLLD 261
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A R+F M N VS ++MI+G+AQ+G EALRLF M + I P + VS L AC+
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACS 321
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM-----IDLLGRAGKLTDAERL 493
+ G + + + + GF ++C+ ID+ + G L A+ L
Sbjct: 322 NIG-------FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQML 366
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 146/348 (41%), Gaps = 53/348 (15%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C R++ G S+H L++ + + + +Y+K G L A F H N
Sbjct: 215 VIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRN 274
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
S+ + +IS +A G ++ AL LF++M+
Sbjct: 275 DVSW-------------------------------SAMISGFAQNGQSDEALRLFRNMQA 303
Query: 125 KRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D L + A SN L L + +H I FD + + + YS+ G L
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGF-IVRRFDFNCILGTAAIDMYSKCGSLAS 362
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F + + +D + WN+M+ G H G +AL LFQEM + D T AS+L+A
Sbjct: 363 AQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSAL- 420
Query: 243 SLEDLV--GGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-P 294
S LV G L F H + + H L+DL A+ SG + + + +
Sbjct: 421 SHSGLVEEGKLWFGCMVNHFKITPAEKHYVC-----LVDLLAR-SGLVEEASDLLTSMKA 474
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+P + +W ++SG ++ LG N + PDD + ++S
Sbjct: 475 EPTVAIWVALLSGCLNNKKLE---LGESIADNILELQPDDVGVLALVS 519
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/638 (35%), Positives = 340/638 (53%), Gaps = 80/638 (12%)
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC-GDTESALSLFKDMREKRFDTD 130
+AA R +A A + F P+ +YN L++ YA G A LF D
Sbjct: 24 VAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLF----------D 73
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+++ N+LL C+ +G D A+R+F M
Sbjct: 74 RIPTPDVVS---------------------------YNTLLLCHFASGDADGARRLFASM 106
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
++D SWN+MV + EA +F M + + ++++ F D+
Sbjct: 107 -PVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR----NSVSWNAMVSGFACSGDMSTA 161
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
++ + + +++ + + ++ Y G++ +K FE +P +LV WN +++GY
Sbjct: 162 EEWFRNAPEK---EDAVLWTAMVSGYMDI-GNVVKAIKYFEAMPVRNLVSWNAVVAGYV- 216
Query: 311 KEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
K ++D AL F+ + R P+ + V+ CSNLS GKQIH +K+ + N
Sbjct: 217 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRN- 275
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
++V +LV+MY KCG+L A LF M + V+ N+MI+GYAQHG G EA+ LFE M +
Sbjct: 276 LTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKD 335
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ P ITFV VL+AC HTG G + F M++++G EP +HYSCM+DLL RAGKL
Sbjct: 336 EGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLE 395
Query: 489 DAERLIEAMPFNP-----GSI------------ALKAANHFLQLEPSNAVPYVMLANIYA 531
A I +MPF P G++ A AA ++ +P +A YV LANIYA
Sbjct: 396 RAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYA 455
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSR 591
+ +W++V+ +RR M+D V K PG+SWIE+K +H F + D HP + IH L +++
Sbjct: 456 VANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAE 515
Query: 592 KMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
+MK+ GYVPD K + L+ HSEKLA+AFGL+ST++G + + KNLR+CGD
Sbjct: 516 RMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGD 575
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CHNA K IS I REI +RDT RFH F+ G CSC DYW
Sbjct: 576 CHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 178/377 (47%), Gaps = 30/377 (7%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQL-RIASARQLFDQIPQPDLVSYNTLISAY 106
G L+ A AF T ++N LLA YAR R+A AR LFD+IP PD+VSYNTL+ +
Sbjct: 31 GDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCH 90
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGL-----------------ITASSNNLCLIK 149
GD + A LF M + + +SGL + S + ++
Sbjct: 91 FASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVS 150
Query: 150 QLHCLAIYCG----FDHYASVNNSLLTCYSRNGFLDEAKRV----FYEMGEIKDEVSWNS 201
C F + +++L +G++D V ++E +++ VSWN+
Sbjct: 151 GFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNA 210
Query: 202 MVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+V Y ++ +AL+LF+ MV + + TL+S+L ++L L G Q H +K
Sbjct: 211 VVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKL 270
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
+N +G+ L+ +Y KC GD+ +F E+ D+V WN MISGY+Q + +A+
Sbjct: 271 LLSRNLTVGTSLVSMYCKC-GDLSSACILFGEMHTRDVVAWNAMISGYAQHGD-GKEAIN 328
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F+++ G P+ +FV V++AC + G Q ++ R+ + +V +
Sbjct: 329 LFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLL 388
Query: 380 SKCGNLEDARRLFDRMP 396
+ G LE A MP
Sbjct: 389 CRAGKLERAVDFIRSMP 405
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 10/222 (4%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF-NQTQHANVFSFNVLLAAYARQLRI 81
A+ ++N V ++A +S ++ G +S A F N + + + +++ Y +
Sbjct: 136 AMPVRNSVSWNAMVSG-----FACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNV 190
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLITA 140
A + F+ +P +LVS+N +++ Y + AL LF+ M RE + TLS ++
Sbjct: 191 VKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 250
Query: 141 SSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
SN L KQ+H + +V SL++ Y + G L A +F EM +D V+
Sbjct: 251 CSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEM-HTRDVVA 309
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
WN+M+ Y QH +G EA+ LF+ M + + T +LTA
Sbjct: 310 WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTA 351
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H +K L+ + + + +Y KCG LS+A F +
Sbjct: 243 TLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEM 302
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V ++N +++ YA+ A LF+++ +P+ +++ +++A G + +
Sbjct: 303 HTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGI 362
Query: 117 SLFKDMRE 124
F+ M+E
Sbjct: 363 QCFEGMQE 370
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH-GIGMEALRLF 423
RS S++ A VA + G+L A F P T + N ++AGYA+ G +A LF
Sbjct: 13 RSRARSLSTAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLF 72
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP--EGEHYSCMIDLL 481
+ IP ++ + L C A+G + +F P + ++ M+ L
Sbjct: 73 D-----RIPTPDVVSYNTLLLCHFASGDADGARR------LFASMPVRDVASWNTMVSGL 121
Query: 482 GRAGKLTDAERLIEAMP 498
++G + +A+ + AMP
Sbjct: 122 SKSGAVEEAKVVFLAMP 138
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/679 (33%), Positives = 347/679 (51%), Gaps = 108/679 (15%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
++V+ N L+ YA ++ AR++FD D+VS+N++++ Y G+ E A ++ M
Sbjct: 159 SDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM 218
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
E+ + AS NS++ + + G ++E
Sbjct: 219 PERN-----------VIAS--------------------------NSMIVLFGKKGNVEE 241
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A ++F EM + KD VSW++++ Y Q+ EAL LF+EM + + +D + S+L+A +
Sbjct: 242 ACKLFNEMKQ-KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACS 300
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS---------------------- 280
L ++ G H ++K G ++ + LI +Y+ C
Sbjct: 301 RLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNS 360
Query: 281 --------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
G++ +F+ +P D V W+ MISGY+Q++ ++ + L F+++ G P
Sbjct: 361 MISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFT-ETLVLFQEMQIEGTKP 419
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN----NALVAMYSKCGNLED 387
D+ V VISAC++L+ GK IHA IR N + +N L+ MY K G +ED
Sbjct: 420 DETILVSVISACTHLAALDQGKWIHAY-----IRKNGLKINIILGTTLINMYMKLGCVED 474
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F + E + N++I G A +G+ ++L+ F M E + P ITFV+VL AC H
Sbjct: 475 ALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRH 534
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP------ 501
G V EG ++F+ M P +HY CM+DLLGRAG L +AE LIE+MP P
Sbjct: 535 MGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWG 594
Query: 502 -----------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+ ++L P + V+L+NIYA+ G W +V +R +MR G
Sbjct: 595 ALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHG 654
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V K PG S IE ++H F+A D +HP + I + L+EM++K+K GY PD
Sbjct: 655 VVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDID 714
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE L HSEKLA+AFGL++ PI ++KNLRIC DCH A K IS REI VR
Sbjct: 715 EEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVR 774
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D +RFH FK G CSC DYW
Sbjct: 775 DRHRFHHFKQGSCSCMDYW 793
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 146/349 (41%), Gaps = 95/349 (27%)
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
N+M+ Y Q +A+ +++ M+ + D YT + + + G H++K
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLK 154
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY----------- 308
GF + +I + LI++YA C G++ D KVF+ D+V WN+M++GY
Sbjct: 155 VGFDSDVYIQNTLINMYAVC-GNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKD 213
Query: 309 ------------------------------------SQKEEYSDQAL-GCFKK------- 324
QK+ S AL C+++
Sbjct: 214 VYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEA 273
Query: 325 ------LNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVA 377
+N G D+ + V+SACS L + GK +H L +K+ I + +++ NAL+
Sbjct: 274 LILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIET-YVNLQNALIH 332
Query: 378 MYS-------------------------------KCGNLEDARRLFDRMPEHNTVSLNSM 406
MYS KCG +E AR LFD MP+ + VS ++M
Sbjct: 333 MYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAM 392
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
I+GYAQ E L LF+ M P VSV+SAC H + +G+
Sbjct: 393 ISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGK 441
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 167/374 (44%), Gaps = 22/374 (5%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C ++TGK +H L +K + L N I +YS C + A F+++ +
Sbjct: 295 VLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLD 354
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
S+N +++ Y + I AR LFD +P D VS++ +IS YA L LF++M+
Sbjct: 355 QISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQI 414
Query: 125 KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ D L +I+A ++ L K +H G + +L+ Y + G +++
Sbjct: 415 EGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVED 474
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A VF + E K +WN++++ + ++L+ F EM + + T ++L A
Sbjct: 475 ALEVFKGLEE-KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACR 533
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSG------LIDLYAKCSGDMRDCMKVFEEIPQ- 295
+ GL H + Q IG ++DL + +G +++ ++ E +P
Sbjct: 534 HM-----GLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGR-AGMLKEAEELIESMPMA 587
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
PD+ W ++ ++Y D G V HPD F ++ SN+ S G +
Sbjct: 588 PDVSTWGALLGAC---KKYGDNETGERIGRKLVELHPDHDGFNVLL---SNIYASKGNWV 641
Query: 356 HALTIKIEIRSNRI 369
L ++ +R + +
Sbjct: 642 DVLEVRGMMRQHGV 655
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSG-DMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q + +I SGF ++S S L+ + ++ ++F I P+ + NTM+ GY Q
Sbjct: 44 QILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQ 103
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRI 369
+ +A+ +K + D+ ++ + +CS L+ GK I +K+ S+ +
Sbjct: 104 RNSPC-KAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSD-V 161
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+ N L+ MY+ CGNL DAR++FD + VS NSM+AGY G EA +++ M E
Sbjct: 162 YIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPER 221
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
N+ +N S++ G V E K F+ MK
Sbjct: 222 NVIASN----SMIVLFGKKGNVEEACKLFNEMK 250
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
N+ + ++F + N N+M+ GY Q +A+ ++++MLE+N+ N T+ +
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
+C+ +G+ + + GF+ + + +I++ G L+DA ++ +
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKV-GFDSDVYIQNTLINMYAVCGNLSDARKVFDG 186
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 348/617 (56%), Gaps = 42/617 (6%)
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
+S N LI + G + AL + +E + L L ++L ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLS--QESSPSQQTYELLILCCGHRSSLSDGLRVHRHIL 104
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G D + L+ YS G +D A++VF + + WN++ A G E L
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVF-DKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLE----DLVGGLQFHAHLIKSGFHQNSHIGSGL 272
L+ +M + + D +T +L A + E L G + HAHL + G++ + +I + L
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTL 223
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL--NRVGY 330
+D+YA+ G + VF +P ++V W+ MI+ Y+ K + +AL F+++
Sbjct: 224 VDMYARF-GCVDYASYVFNGMPVRNVVSWSAMIACYA-KNGKAFEALRTFREMMTETKDS 281
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ + V V+ AC++L+ G+ IH ++ + S + V +ALV MY +CG L+ +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSI-LPVISALVTMYGRCGKLDVGQ 340
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
R+FDRM + + VS NS+I+ Y HG G +A+++FE ML PT +TFVSVL AC+H G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG------- 502
V EG++ F M G +P+ EHY+CM+DLLGRA +L +A ++++ M PG
Sbjct: 401 LVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 503 ----------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+A +A+ LEP NA YV+LA+IYA + W+EV +++L+ RG+Q
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------ 600
K PG W+EV+++M+ FV+ D +P++++IH +L +++ MK+ GY+P
Sbjct: 521 KLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 580
Query: 601 DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+KE+ ++ HSEKLA+AFGL++TS GEPI + KNLR+C DCH KFIS +EI VRD
Sbjct: 581 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 640
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FK+G CSCGDYW
Sbjct: 641 NRFHRFKNGVCSCGDYW 657
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 47/317 (14%)
Query: 1 TFRQVLKTCVGRR----DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T+ VLK CV L GK +HA + Y+ + +Y++ GC+ A +
Sbjct: 180 TYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
FN NV S++ ++A YA+ G AL
Sbjct: 240 FNGMPVRNVVSWSAMIACYAKN-------------------------------GKAFEAL 268
Query: 117 SLFKDMREKRFDT--DGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLL 171
F++M + D+ + T+ ++ A + +L ++Q +H + G D V ++L+
Sbjct: 269 RTFREMMTETKDSSPNSVTMVSVLQACA-SLAALEQGRLIHGYILRRGLDSILPVISALV 327
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
T Y R G LD +RVF M + +D VSWNS++ +YG H G +A+Q+F+EM++
Sbjct: 328 TMYGRCGKLDVGQRVFDRMHD-RDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTP 386
Query: 232 YTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
T S+L A S E LV G F + G + ++DL + + + + K+
Sbjct: 387 VTFVSVLGA-CSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGR-ANRLDEAAKM 444
Query: 290 FEEI-PQPDLVLWNTMI 305
+++ +P +W +++
Sbjct: 445 VQDMRTEPGPKVWGSLL 461
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 345/642 (53%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL YA R A +F Q+P DL+S+N+L++++ + G + AL L M
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T + + A + + + LH L + G + + N+L++ Y + G + E++RV
Sbjct: 450 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 509
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
+M +D V+WN+++ Y + + +AL FQ M + + T+ S+L+A D
Sbjct: 510 LLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 568
Query: 247 LVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L+ G HA+++ +GF + H+ + LI +YAKC GD+ +F + +++ WN M+
Sbjct: 569 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC-GDLSSSQDLFNGLDNRNIITWNAML 627
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+ + + ++ L K+ G D SF +SA + L+ G+Q+H L +K+
Sbjct: 628 AANAH-HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 686
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ + NA MYSKCG + + ++ + S N +I+ +HG E F
Sbjct: 687 EHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 745
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
MLE I P ++TFVS+L+AC+H G V +G Y+ M+ FG EP EH C+IDLLGR+
Sbjct: 746 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 805
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G+L +AE I MP P + KAA + +LEP + YV+ +
Sbjct: 806 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 865
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N++A +G+WE+V +R+ M + ++KK SW+++K ++ F D +HP EI+ LE
Sbjct: 866 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 925
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + +K++GYV D KE L +HSE+LA+A+ L+ST G + + KNLR
Sbjct: 926 DIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLR 985
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IC DCH+ KF+S + GR I +RD YRFH F+ G CSC DYW
Sbjct: 986 ICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 217/491 (44%), Gaps = 75/491 (15%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
TG+++HAL +K LV S +N I +Y+K G
Sbjct: 90 TGRAVHALCVKGLVRLSVLHTNTLINMYTKFG---------------------------- 121
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
R+ AR LFD +P + VS+NT++S G + F+ M + F ++
Sbjct: 122 ---RVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 178
Query: 137 LITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
L+TA + + + Q+H G V+ ++L Y G + +++VF EM +
Sbjct: 179 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD- 237
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
++ VSW S++V Y E E + ++++ E L G Q
Sbjct: 238 RNVVSWTSLMVGYSDKGEPEEVIDIYKD-----------------------ESL--GRQI 272
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
++KSG + + LI + G++ +F+++ + D + WN++ + Y+Q
Sbjct: 273 IGQVVKSGLESKLAVENSLISMLGSM-GNVDYANYIFDQMSERDTISWNSIAAAYAQNG- 330
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVN 372
+ +++ F + R + + ++S ++ G+ IH L +K+ S + V
Sbjct: 331 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVC 389
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ MY+ G +A +F +MP + +S NS++A + G ++AL L M+ +
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449
Query: 433 PTNITFVSVLSAC-----AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+TF S L+AC G++ G ++ +F + G + ++ + G+ G++
Sbjct: 450 VNYVTFTSALAACFTPDFFEKGRILHG---LVVVSGLFYNQIIG---NALVSMYGKIGEM 503
Query: 488 TDAERLIEAMP 498
+++ R++ MP
Sbjct: 504 SESRRVLLQMP 514
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C+ DL+ GK LHA + ++ N I +Y+KCG LS++ FN
Sbjct: 555 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 614
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ N+ ++N +LAA A G E L L
Sbjct: 615 LDNRNIITWNAMLAANAHH-------------------------------GHGEEVLKLV 643
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR D F+ S ++A++ L +QLH LA+ GF+H + + N+ YS+
Sbjct: 644 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 703
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + E ++ + SWN ++ A G+H E F EM+ + + T S+
Sbjct: 704 GEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 762
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
LTA + + GL ++ + + G +IDL + SG + + ++P +
Sbjct: 763 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR-SGRLAEAETFISKMPMK 821
Query: 296 PDLVLWNTMIS 306
P+ ++W ++++
Sbjct: 822 PNDLVWRSLLA 832
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/709 (32%), Positives = 355/709 (50%), Gaps = 105/709 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ +L+ C+ + L K +H +LKN + + + LY C
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCN------------ 57
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ AR+LFD+IP P ++ +N +I AYA G + A+ L+
Sbjct: 58 -------------------QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYH 98
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + +T ++ A S L + ++H A G + V +L+ Y++ G
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L EA+R+F M +D V+WN+M+ + +A+QL +M + + T+ +L
Sbjct: 159 ILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
L LYA+ K+F+ + +
Sbjct: 218 PTCQCL------------------------------LYAR---------KIFDVMGVRNE 238
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W+ MI GY + +AL F+ + G PD + + V+ ACS+L+ G H
Sbjct: 239 VSWSAMIGGYV-ASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 297
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I ++ + + NAL+ MYSKCG + AR +F+RM H+ VS N+MI GY HG+GM
Sbjct: 298 YLIVRGFATDTL-ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 356
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LF +L + P +ITF+ +LS+C+H+G V EG+ +F M F P EH CM
Sbjct: 357 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 416
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+D+LGRAG + +A I MPF P + + + L P +
Sbjct: 417 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 476
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+NIY+A+G+W++ A IR +D G++K PG SWIE+ +H FV D SH +
Sbjct: 477 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLS 536
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ LEE+ +MK+ GY +KE+ L++HSEKLA+AFG+L+ G PI
Sbjct: 537 QINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPI 596
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LV KNLR+CGDCH AIKF++ I REITVRD RFH FK+G C+CGD+W
Sbjct: 597 LVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 356/653 (54%), Gaps = 48/653 (7%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A+V++ N L+A YA+ + A ++FD +P D+VS+NT++ Y G AL+ F++M
Sbjct: 153 ADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREM 212
Query: 123 REK---RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ D+ G + + L L +++H AI G + V SL+ Y + G
Sbjct: 213 NDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGN 272
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+ VF +M ++ V+WN M+ Y + ++A F +M +++ T ++LT
Sbjct: 273 VFFAENVFAKM-PLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLT 331
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A E + G HA++++ F + + + L+++Y K G + K+F +I LV
Sbjct: 332 ACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKV-GKVESSEKIFGQITDKTLV 390
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHAL 358
WN MI+ Y E Y +A+ F +L +PD + V+ A L S KQ+H+
Sbjct: 391 SWNNMIAAYMYMEMY-QEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSY 449
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K+ + + + NA++ MY++CGN+ +R +FD+MP + +S N++I GYA HG G
Sbjct: 450 IVKLGYGDSTL-IMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKI 508
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F+ M + + P TFVSVL+AC+ +G AEG K F+ M+ +G P+ EHY CM
Sbjct: 509 ALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMT 568
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DLLGRAG+L + R IE MP P S IA AA QLE +N
Sbjct: 569 DLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTG 628
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+++YA +G+WE+V IR LM+++G+++ S +E+ + FV D SHP ++
Sbjct: 629 CYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEK 688
Query: 582 IHNYLEEMSRKMKQ-----------------AGYVPDKEKRLVHHSEKLAVAFGLLSTSY 624
IH + + +SR + + +P+K HS +LAVAFGL+S+
Sbjct: 689 IHEFSDILSRNIGEDLDSSSNLRDSDPFASSTTVLPNK------HSVRLAVAFGLISSEA 742
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G P+LV KN+R+C CH+A+K IS +GR+I V DT +H F DG C CGDYW
Sbjct: 743 GSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIFSDGSCCCGDYW 795
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 209/432 (48%), Gaps = 9/432 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ ++ R+ A F + +P +N +I +AD AL+ ++ M + D
Sbjct: 60 LILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPD 119
Query: 131 GFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT ++ A + L + H I G NSL+ Y++ G + +A+RVF
Sbjct: 120 RFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFD 179
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDL 247
M +D VSWN+MV Y + G AL F+EM +LQ+G D + + L A L
Sbjct: 180 GM-PARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G + H + I+ G Q+ +G+ L+D+Y KC G++ VF ++P +V WN MI G
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKC-GNVFFAENVFAKMPLRTVVTWNCMIGG 297
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRS 366
Y+ E D A CF ++ G+ + + + +++AC+ SL G+ +HA ++
Sbjct: 298 YALNERPVD-AFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLP 356
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + + AL+ MY K G +E + ++F ++ + VS N+MIA Y + EA+ LF +
Sbjct: 357 H-VVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL 415
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
L + P T +V+ A G + + ++ S + + G+ + ++ + R G
Sbjct: 416 LNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKL-GYGDSTLIMNAVMHMYARCGN 474
Query: 487 LTDAERLIEAMP 498
+ + + + MP
Sbjct: 475 IVASREIFDKMP 486
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 216/469 (46%), Gaps = 53/469 (11%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C L G+ +H +++ + + + +Y KCG NV
Sbjct: 229 LAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCG---------------NV 273
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F A +F ++P +V++N +I YA A F MR
Sbjct: 274 F----------------FAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVD 317
Query: 126 RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
F + T L+TA + + + +H + F + + +LL Y + G ++ +
Sbjct: 318 GFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESS 377
Query: 184 KRVFYEMGEIKDE--VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+++F G+I D+ VSWN+M+ AY EA+ LF E+++ L D +T+ +++ AF
Sbjct: 378 EKIF---GQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAF 434
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L + Q H++++K G+ ++ I + ++ +YA+C G++ ++F+++P D++ W
Sbjct: 435 VLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARC-GNIVASREIFDKMPGKDVISW 493
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALT 359
NT+I GY+ + AL F ++ G P++ +FV V++AC S L K+ +++
Sbjct: 494 NTIIIGYAIHGQ-GKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQ 552
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL--NSMIAGYAQHGIGM 417
+ + +I + + + G L + R + MP T + + + A ++ I +
Sbjct: 553 QEYGMIP-QIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDI 611
Query: 418 ---EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
A R+F+ LE N +V + S A G+ + ++ S+MK+
Sbjct: 612 AEYAAERIFQ--LEHN---NTGCYVVLSSMYADAGRWEDVERIRSLMKE 655
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 43/320 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C + G+S+HA ++ L + +Y K G + ++ F Q
Sbjct: 325 TAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQI 384
Query: 61 QHANVFSFNVLLAAY----ARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+ S+N ++AAY Q IA +L +Q PD + T++ A+
Sbjct: 385 TDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFV--------- 435
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L +R+ KQ+H + G+ + N+++ Y+R
Sbjct: 436 -LLGSIRQ-----------------------CKQMHSYIVKLGYGDSTLIMNAVMHMYAR 471
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + ++ +F +M KD +SWN++++ Y H +G AL++F EM + + T S
Sbjct: 472 CGNIVASREIFDKMPG-KDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVS 530
Query: 237 ILTAFT-SLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+LTA + S + G +F++ + G Q H G + DL + +G++R+ ++ E +P
Sbjct: 531 VLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGC-MTDLLGR-AGELREVLRFIENMP 588
Query: 295 -QPDLVLWNTMISGYSQKEE 313
P +W ++++ K +
Sbjct: 589 IAPTSRIWGSLLTASRNKND 608
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+L+ + G +++A F + N MI G+A + ++AL + ML+ P
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
TF VL CA G + EG+ + + + G + + ++ L + G + DAER+
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKL-GLGADVYTANSLVALYAKLGLVGDAERV 177
Query: 494 IEAMP 498
+ MP
Sbjct: 178 FDGMP 182
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 359/656 (54%), Gaps = 49/656 (7%)
Query: 66 FSFNVLLAAYARQLRIASARQLF-DQIP-QPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F+FN LL+ YAR +A A++LF P + D+V++NT++S G + A+ DM
Sbjct: 204 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 263
Query: 124 EKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSRNG 178
DG T + + A S L + +++H I D A+ V ++L+ Y+ +
Sbjct: 264 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK--DDELAANSFVASALVDMYATHE 321
Query: 179 FLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQLGLD--MYTLA 235
+ +A++VF + + ++ WN+M+ Y Q EAL+LF M + + G T+A
Sbjct: 322 QVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA-EAGFVPCETTMA 380
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L A E G H +++K G N + + L+D+YA+ G ++F +
Sbjct: 381 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL-GKTDVARRIFAMVDL 439
Query: 296 PDLVLWNTMISGYSQKEEYSD--QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLG 352
PD+V WNT+I+G + +D Q ++L G P+ + + ++ C+ L+ P+ G
Sbjct: 440 PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARG 499
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K+IH ++ + ++ ++V +ALV MY+KCG L +R +FDR+P NT++ N +I Y
Sbjct: 500 KEIHGYAVRHALDTD-VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGM 558
Query: 413 HGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG+G EA LF+ M + P +TF++ L+AC+H+G V G + F M+ G EP
Sbjct: 559 HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 618
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP----------GSIALKAANHFLQLE----- 516
+ +C++D+LGRAG+L +A ++ +M G+ L H ++
Sbjct: 619 DILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLL 678
Query: 517 ---PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
P A YV+L NIY+A+G+W A +R MR RGV K+PG SWIEV +H F+A +
Sbjct: 679 ELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGE 738
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
+HP +E+H ++E + +M GY PD K L HSEKLA+AFGLL
Sbjct: 739 SAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLR 798
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G I V KNLR+C DCH A KF+S + GREI +RD RFH F++G+CSCGDYW
Sbjct: 799 AAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 219/449 (48%), Gaps = 23/449 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKR 126
N LL AYAR R+A+A ++F I D VS+N+LISA + AL+ + M
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 127 FDTDGFTLSGLITASSN------NLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNG 178
FTL ++ A S+ + L ++ H A+ G H N+LL+ Y+R G
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 217
Query: 179 FLDEAKRVFYEMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+ +A+R+F + D V+WN+MV Q EA+Q +MV+L + D T AS
Sbjct: 218 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASA 277
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L A + LE L G + HA++IK NS + S L+D+YA + +VF+ +P
Sbjct: 278 LPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE-QVGKARQVFDMVPDS 336
Query: 297 --DLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLGK 353
L +WN MI GY+Q ++AL F ++ G+ P + + V+ AC+ GK
Sbjct: 337 GKQLGMWNAMICGYAQA-GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 395
Query: 354 Q-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H +K + NR V NAL+ MY++ G + ARR+F + + VS N++I G
Sbjct: 396 EAVHGYVVKRGMAGNRF-VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 454
Query: 413 HGIGMEALRL---FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
G +A +L + + E + P IT +++L CA A G++ +
Sbjct: 455 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDT 513
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ S ++D+ + G L + + + +P
Sbjct: 514 DVAVGSALVDMYAKCGCLALSRAVFDRLP 542
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 189/409 (46%), Gaps = 42/409 (10%)
Query: 149 KQLHCLAIYCGFDHYAS--VNNSLLTCYSRNGFLDEAKRVFYEMGE-IKDEVSWNSMVVA 205
+ +H A+ G H S V N+LLT Y+R G L A VF + + D VS+NS++ A
Sbjct: 77 RAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISA 136
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG----GLQFHAHLIKSG 261
R AL + M++ L +TL S+L A + L G + HA +K+G
Sbjct: 137 LCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNG 196
Query: 262 F---HQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIP-QPDLVLWNTMISGYSQKEEYSD 316
HQ + L+ +YA+ G + D ++F P + D+V WNTM+S Q + D
Sbjct: 197 LLHGHQRFAF-NALLSMYARL-GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMF-D 253
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNAL 375
+A+ + +G PD +F + ACS L +G+++HA IK + + V +AL
Sbjct: 254 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 313
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTV--SLNSMIAGYAQHGIGMEALRLFEWM-LETNIP 432
V MY+ + AR++FD +P+ N+MI GYAQ G+ EALRLF M E
Sbjct: 314 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 373
Query: 433 PTNITFVSVLSACAHTGKVA--EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P T SVL ACA + A E + + + M G + ++D+ R GK TD
Sbjct: 374 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV---QNALMDMYARLGK-TDV 429
Query: 491 ERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVP 522
R I AM P + A + A QLE VP
Sbjct: 430 ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 478
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFK 120
AN F + L+ YA ++ ARQ+FD +P L +N +I YA G E AL LF
Sbjct: 305 ANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFA 364
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E F T++ ++ A + + + +H + G V N+L+ Y+R
Sbjct: 365 RMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL 424
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG---LDMYTL 234
G D A+R+F M ++ D VSWN+++ +A QL +EM L+ G + TL
Sbjct: 425 GKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 483
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L L G + H + ++ + +GS L+D+YAKC G + VF+ +P
Sbjct: 484 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC-GCLALSRAVFDRLP 542
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN 346
+ + + WN +I Y +A F ++ G P++ +F+ ++ACS+
Sbjct: 543 RRNTITWNVLIMAYGM-HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 594
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 13/252 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ YAR + AR++F + PD+VS+NTLI+ G A L ++M+
Sbjct: 410 NRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ 469
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ + G + + + C I K++H A+ D +V ++L+ Y++
Sbjct: 470 Q--LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAK 527
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLA 235
G L ++ VF + ++ ++WN +++AYG H G EA LF M S + + T
Sbjct: 528 CGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 586
Query: 236 SILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSG-DMRDCMKVFEEI 293
+ L A + + GLQ FHA G I + ++D+ + D M E
Sbjct: 587 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEA 646
Query: 294 PQPDLVLWNTMI 305
+ + W+TM+
Sbjct: 647 GEQQVSAWSTML 658
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 46/220 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+ + F++
Sbjct: 482 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
N ++NVL+ AY A LFD++ +P+ V++ ++A + G +
Sbjct: 542 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 601
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY- 174
L LF M DH +L C
Sbjct: 602 LQLFHAMER------------------------------------DHGVEPTPDILACVV 625
Query: 175 ---SRNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHR 210
R G LDEA + M + +VS W++M+ A HR
Sbjct: 626 DILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHR 665
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 61/272 (22%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIAGYAQHGIGMEALRLF-EW- 425
+V NAL+ Y++CG L A +F + + H+ VS NS+I+ AL LF W
Sbjct: 95 AVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWD 144
Query: 426 --------MLETNIPPTNITFVSVLSACAHTGKVAEG-----QKYFSMMKDMFGFEPEGE 472
ML P T+ T VSVL A +H A + + +K+ +
Sbjct: 145 HALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRF 204
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
++ ++ + R G + DA+RL PG + V + + ++
Sbjct: 205 AFNALLSMYARLGLVADAQRLFAGA--TPGR--------------GDVVTWNTMVSVLVQ 248
Query: 533 SGKWEEVATIRRLMRDRGVQKK--------PGFSWIE---VKKQMHVFVAEDGSHPMIKE 581
SG ++E M GV+ P S +E V ++MH +V +D
Sbjct: 249 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSF 308
Query: 582 IHNYLEEMSRKMKQAG-------YVPDKEKRL 606
+ + L +M +Q G VPD K+L
Sbjct: 309 VASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/669 (33%), Positives = 352/669 (52%), Gaps = 54/669 (8%)
Query: 55 HAFNQ--TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
HAF + A+ L+ Y + ++ A ++F++I + D+VS+N +++A A G
Sbjct: 263 HAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFH 322
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ-------LHCLAIY--CGFDHY 163
+ A F++M G S + + N C + + LA+ CG +
Sbjct: 323 DKAFKCFREML-----LVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESV 377
Query: 164 ASV-NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS---WNSMVVAYGQHREGLEALQLF 219
V +++ YSR A + + +D+ S WN+++ Y ++ + EA +F
Sbjct: 378 DVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIF 437
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+ M+ + +D +L ++ A S L G H+ L +S + + + + L+ +YA+
Sbjct: 438 RLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARL 497
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + D ++F+ + +++ W M+ +SQ + +AL F+ + G P++ +F
Sbjct: 498 -GSLEDAREIFDAMTTRNVISWTAMVGVHSQLG-LNREALRIFRSILLEGVAPNEVTFTA 555
Query: 340 VISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
V++AC NL S K + A + N + V N L+ KCG+LE+ F M
Sbjct: 556 VLNACGNLASIPAAKLVQACLSETGFFGN-VEVANGLLCTLGKCGSLEEVANFFQVMAVK 614
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
N VS N+ IA AQHG G+ + LF+ M I ++T + VLS+C+H G VA+G YF
Sbjct: 615 NQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYF 674
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-------------- 504
M +GF E EHYSC+IDLL RAG L AE ++ +PF S+
Sbjct: 675 LNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHG 734
Query: 505 ----ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A L L P + PY+++ N+YA +GKW E A +R+ M + G +K+PG SWI
Sbjct: 735 DLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWI 794
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVH 608
EVK ++H F D SHP EIH LE ++ +MK+AG+V D KE L
Sbjct: 795 EVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQ 854
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLA+AFGL+ST+ GEP+ +MKNLR+C DCH+A KFIS + GREI VRD YRFH F+
Sbjct: 855 HSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRG 914
Query: 669 GRCSCGDYW 677
G CSC D+W
Sbjct: 915 GACSCEDFW 923
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 249/574 (43%), Gaps = 81/574 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C DL G+ +H L L+N + +L + +Y KCG A F
Sbjct: 42 TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSY----------------- 99
Q +V ++ L+ AR A LF ++ P+ V+Y
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIR 161
Query: 100 ----------------NTLISAYADCGDTES----------------------------- 114
+++AY CGD +S
Sbjct: 162 ARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQG 221
Query: 115 --ALSLFKDMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
AL LF+ MR + T + A S + ++H A D V +L
Sbjct: 222 DEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTAL 281
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y + G +D+A+ +F + E +D VSWN+M+ A + +A + F+EM+ +
Sbjct: 282 VNMYGKFGKVDDAEEIFERIQE-RDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPS 340
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS---HIGSGLIDLYAKCSGD---MR 284
T +IL A L G ++ G S +G+ ++++Y++C
Sbjct: 341 RITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFS 400
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+ + ++ QP +++WNT++S Y + E++ ++A F+ + G D S + V +AC
Sbjct: 401 SSLLLEQDRDQPSIMMWNTVLSLYVENEQF-EEAFTIFRLMLLGGVTIDTVSLMTVFNAC 459
Query: 345 -SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S+ S GK IH+L + E+ + + V NALV MY++ G+LEDAR +FD M N +S
Sbjct: 460 GSSASLEKGKWIHSLLTESEL-TRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISW 518
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+M+ ++Q G+ EALR+F +L + P +TF +VL+AC + + + + + +
Sbjct: 519 TAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSE 578
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
GF E + ++ LG+ G L + + M
Sbjct: 579 T-GFFGNVEVANGLLCTLGKCGSLEEVANFFQVM 611
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 145/306 (47%), Gaps = 12/306 (3%)
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
+G K + S + QHR + L+ F + + D T A+++ L DL
Sbjct: 6 LGRRKPRIDPVSFSTSAPQHRT--DELKYFDDGSA-----DASTFAALIHKCARLHDLAQ 58
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + H ++++G +G+ L+ +Y KC G + VF+ I +V W ++I G +
Sbjct: 59 GRRIHGLILRNGIEVGDFLGARLLAMYCKC-GSPEEARAVFQGIQDKSVVAWTSLI-GVN 116
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
+ + +A F+++ G P+D ++V V+ AC + P I A +
Sbjct: 117 ARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGH--PWEVDTIRARVEACGSLELDV 174
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V A++ Y KCG+L+ A +FD + + N+MI+ H G EAL LF M
Sbjct: 175 IVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLG 234
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P T V+ L+AC H+ +E + + +++ G + + + ++++ G+ GK+ D
Sbjct: 235 GVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAG-DADTVVQTALVNMYGKFGKVDD 293
Query: 490 AERLIE 495
AE + E
Sbjct: 294 AEEIFE 299
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 221/491 (45%), Gaps = 61/491 (12%)
Query: 125 KRFD---TDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
K FD D T + LI A ++L +++H L + G + + LL Y + G
Sbjct: 31 KYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGS 90
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+EA+ VF + + K V+W S++ + EA LF+EM + + T ++L
Sbjct: 91 PEEARAVFQGIQD-KSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLG 149
Query: 240 AFTSLEDLVGGLQFHAHLIKS------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
A G + I++ + + + +++ Y KC GD+ VF+ I
Sbjct: 150 AC--------GHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKC-GDLDSAWGVFDGI 200
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC---SNLSPS 350
D +WN MIS E+ D+AL F+++ G P+ + V ++AC + S +
Sbjct: 201 LVRDAAVWNAMISLLVAHEQ-GDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEA 259
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
L +IHA ++ ++ + V ALV MY K G ++DA +F+R+ E + VS N+M+
Sbjct: 260 L--RIHAFARELAGDADTV-VQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTAN 316
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEP 469
A +G +A + F ML P+ IT+V++L+AC + G ++ ++ G E
Sbjct: 317 ACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIES 376
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLAN- 528
+D++ + R +P S A + L LE P +M+ N
Sbjct: 377 --------VDVVMGTAIMNMYSRCK-----SPKS----AFSSSLLLEQDRDQPSIMMWNT 419
Query: 529 ---IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE--IH 583
+Y + ++EE TI RLM GV I+ M VF A S + K IH
Sbjct: 420 VLSLYVENEQFEEAFTIFRLMLLGGVT-------IDTVSLMTVFNACGSSASLEKGKWIH 472
Query: 584 NYL--EEMSRK 592
+ L E++RK
Sbjct: 473 SLLTESELTRK 483
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 359/656 (54%), Gaps = 49/656 (7%)
Query: 66 FSFNVLLAAYARQLRIASARQLF-DQIP-QPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F+FN LL+ YAR +A A++LF P + D+V++NT++S G + A+ DM
Sbjct: 206 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 265
Query: 124 EKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSRNG 178
DG T + + A S L + +++H I D A+ V ++L+ Y+ +
Sbjct: 266 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK--DDELAANSFVASALVDMYATHE 323
Query: 179 FLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQLGLD--MYTLA 235
+ +A++VF + + ++ WN+M+ Y Q EAL+LF M + + G T+A
Sbjct: 324 QVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA-EAGFVPCETTMA 382
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L A E G H +++K G N + + L+D+YA+ G ++F +
Sbjct: 383 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL-GKTDVARRIFAMVDL 441
Query: 296 PDLVLWNTMISGYSQKEEYSD--QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLG 352
PD+V WNT+I+G + +D Q ++L G P+ + + ++ C+ L+ P+ G
Sbjct: 442 PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARG 501
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K+IH ++ + ++ ++V +ALV MY+KCG L +R +FDR+P NT++ N +I Y
Sbjct: 502 KEIHGYAVRHALDTD-VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGM 560
Query: 413 HGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG+G EA LF+ M + P +TF++ L+AC+H+G V G + F M+ G EP
Sbjct: 561 HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 620
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP----------GSIALKAANHFLQLE----- 516
+ +C++D+LGRAG+L +A ++ +M G+ L H ++
Sbjct: 621 DILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLL 680
Query: 517 ---PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
P A YV+L NIY+A+G+W A +R MR RGV K+PG SWIEV +H F+A +
Sbjct: 681 ELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGE 740
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
+HP +E+H ++E + +M GY PD K L HSEKLA+AFGLL
Sbjct: 741 SAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLR 800
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G I V KNLR+C DCH A KF+S + GREI +RD RFH F++G+CSCGDYW
Sbjct: 801 AAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 219/449 (48%), Gaps = 23/449 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKR 126
N LL AYAR R+A+A ++F I D VS+N+LISA + AL+ + M
Sbjct: 100 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 159
Query: 127 FDTDGFTLSGLITASSN------NLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNG 178
FTL ++ A S+ + L ++ H A+ G H N+LL+ Y+R G
Sbjct: 160 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 219
Query: 179 FLDEAKRVFYEMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+ +A+R+F + D V+WN+MV Q EA+Q +MV+L + D T AS
Sbjct: 220 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASA 279
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L A + LE L G + HA++IK NS + S L+D+YA + +VF+ +P
Sbjct: 280 LPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE-QVGKARQVFDMVPDS 338
Query: 297 --DLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLGK 353
L +WN MI GY+Q ++AL F ++ G+ P + + V+ AC+ GK
Sbjct: 339 GKQLGMWNAMICGYAQA-GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 397
Query: 354 Q-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H +K + NR V NAL+ MY++ G + ARR+F + + VS N++I G
Sbjct: 398 EAVHGYVVKRGMAGNRF-VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 456
Query: 413 HGIGMEALRL---FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
G +A +L + + E + P IT +++L CA A G++ +
Sbjct: 457 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDT 515
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ S ++D+ + G L + + + +P
Sbjct: 516 DVAVGSALVDMYAKCGCLALSRAVFDRLP 544
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 189/409 (46%), Gaps = 42/409 (10%)
Query: 149 KQLHCLAIYCGFDHYAS--VNNSLLTCYSRNGFLDEAKRVFYEMGE-IKDEVSWNSMVVA 205
+ +H A+ G H S V N+LLT Y+R G L A VF + + D VS+NS++ A
Sbjct: 79 RAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISA 138
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG----GLQFHAHLIKSG 261
R AL + M++ L +TL S+L A + L G + HA +K+G
Sbjct: 139 LCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNG 198
Query: 262 F---HQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIP-QPDLVLWNTMISGYSQKEEYSD 316
HQ + L+ +YA+ G + D ++F P + D+V WNTM+S Q + D
Sbjct: 199 LLHGHQRFAF-NALLSMYARL-GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMF-D 255
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNAL 375
+A+ + +G PD +F + ACS L +G+++HA IK + + V +AL
Sbjct: 256 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 315
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTV--SLNSMIAGYAQHGIGMEALRLFEWM-LETNIP 432
V MY+ + AR++FD +P+ N+MI GYAQ G+ EALRLF M E
Sbjct: 316 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 375
Query: 433 PTNITFVSVLSACAHTGKVA--EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P T SVL ACA + A E + + + M G + ++D+ R GK TD
Sbjct: 376 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV---QNALMDMYARLGK-TDV 431
Query: 491 ERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVP 522
R I AM P + A + A QLE VP
Sbjct: 432 ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 480
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFK 120
AN F + L+ YA ++ ARQ+FD +P L +N +I YA G E AL LF
Sbjct: 307 ANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFA 366
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E F T++ ++ A + + + +H + G V N+L+ Y+R
Sbjct: 367 RMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL 426
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG---LDMYTL 234
G D A+R+F M ++ D VSWN+++ +A QL +EM L+ G + TL
Sbjct: 427 GKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 485
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L L G + H + ++ + +GS L+D+YAKC G + VF+ +P
Sbjct: 486 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC-GCLALSRAVFDRLP 544
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN 346
+ + + WN +I Y +A F ++ G P++ +F+ ++ACS+
Sbjct: 545 RRNTITWNVLIMAYGM-HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 596
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 13/252 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ YAR + AR++F + PD+VS+NTLI+ G A L ++M+
Sbjct: 412 NRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ 471
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ + G + + + C I K++H A+ D +V ++L+ Y++
Sbjct: 472 Q--LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAK 529
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLA 235
G L ++ VF + ++ ++WN +++AYG H G EA LF M S + + T
Sbjct: 530 CGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 588
Query: 236 SILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSG-DMRDCMKVFEEI 293
+ L A + + GLQ FHA G I + ++D+ + D M E
Sbjct: 589 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMET 648
Query: 294 PQPDLVLWNTMI 305
+ + W+TM+
Sbjct: 649 GEQQVSAWSTML 660
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 46/220 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+ + F++
Sbjct: 484 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 543
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
N ++NVL+ AY A LFD++ +P+ V++ ++A + G +
Sbjct: 544 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 603
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY- 174
L LF M DH +L C
Sbjct: 604 LQLFHAMER------------------------------------DHGVEPTPDILACVV 627
Query: 175 ---SRNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHR 210
R G LDEA + M + +VS W++M+ A HR
Sbjct: 628 DILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHR 667
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 61/272 (22%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIAGYAQHGIGMEALRLF-EW- 425
+V NAL+ Y++CG L A +F + + H+ VS NS+I+ AL LF W
Sbjct: 97 AVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWD 146
Query: 426 --------MLETNIPPTNITFVSVLSACAHTGKVAEG-----QKYFSMMKDMFGFEPEGE 472
ML P T+ T VSVL A +H A + + +K+ +
Sbjct: 147 HALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRF 206
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
++ ++ + R G + DA+RL PG + V + + ++
Sbjct: 207 AFNALLSMYARLGLVADAQRLFAGA--TPGR--------------GDVVTWNTMVSVLVQ 250
Query: 533 SGKWEEVATIRRLMRDRGVQKK--------PGFSWIE---VKKQMHVFVAEDGSHPMIKE 581
SG ++E M GV+ P S +E V ++MH +V +D
Sbjct: 251 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSF 310
Query: 582 IHNYLEEMSRKMKQAG-------YVPDKEKRL 606
+ + L +M +Q G VPD K+L
Sbjct: 311 VASALVDMYATHEQVGKARQVFDMVPDSGKQL 342
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 359/656 (54%), Gaps = 49/656 (7%)
Query: 66 FSFNVLLAAYARQLRIASARQLF-DQIP-QPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F+FN LL+ YAR +A A++LF P + D+V++NT++S G + A+ DM
Sbjct: 204 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 263
Query: 124 EKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSRNG 178
DG T + + A S L + +++H I D A+ V ++L+ Y+ +
Sbjct: 264 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK--DDELAANSFVASALVDMYATHE 321
Query: 179 FLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQLGLD--MYTLA 235
+ +A++VF + + ++ WN+M+ Y Q EAL+LF M + + G T+A
Sbjct: 322 QVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA-EAGFVPCETTMA 380
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L A E G H +++K G N + + L+D+YA+ G ++F +
Sbjct: 381 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL-GKTDVARRIFAMVDL 439
Query: 296 PDLVLWNTMISGYSQKEEYSD--QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLG 352
PD+V WNT+I+G + +D Q ++L G P+ + + ++ C+ L+ P+ G
Sbjct: 440 PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARG 499
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K+IH ++ + ++ ++V +ALV MY+KCG L +R +FDR+P NT++ N +I Y
Sbjct: 500 KEIHGYAVRHALDTD-VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGM 558
Query: 413 HGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG+G EA LF+ M + P +TF++ L+AC+H+G V G + F M+ G EP
Sbjct: 559 HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 618
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP----------GSIALKAANHFLQLE----- 516
+ +C++D+LGRAG+L +A ++ +M G+ L H ++
Sbjct: 619 DILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLL 678
Query: 517 ---PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
P A YV+L NIY+A+G+W A +R MR RGV K+PG SWIEV +H F+A +
Sbjct: 679 ELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGE 738
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
+HP +E+H ++E + +M GY PD K L HSEKLA+AFGLL
Sbjct: 739 SAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLR 798
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G I V KNLR+C DCH A KF+S + GREI +RD RFH F++G+CSCGDYW
Sbjct: 799 AAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 219/449 (48%), Gaps = 23/449 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFKDMREKR 126
N LL AYAR R+A+A ++F I D VS+N+LISA + AL+ + M
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 127 FDTDGFTLSGLITASSN------NLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNG 178
FTL ++ A S+ + L ++ H A+ G H N+LL+ Y+R G
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 217
Query: 179 FLDEAKRVFYEMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+ +A+R+F + D V+WN+MV Q EA+Q +MV+L + D T AS
Sbjct: 218 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASA 277
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L A + LE L G + HA++IK NS + S L+D+YA + +VF+ +P
Sbjct: 278 LPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE-QVGKARQVFDMVPDS 336
Query: 297 --DLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLGK 353
L +WN MI GY+Q ++AL F ++ G+ P + + V+ AC+ GK
Sbjct: 337 GKQLGMWNAMICGYAQA-GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 395
Query: 354 Q-IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H +K + NR V NAL+ MY++ G + ARR+F + + VS N++I G
Sbjct: 396 EAVHGYVVKRGMAGNRF-VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 454
Query: 413 HGIGMEALRL---FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
G +A +L + + E + P IT +++L CA A G++ +
Sbjct: 455 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDT 513
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ S ++D+ + G L + + + +P
Sbjct: 514 DVAVGSALVDMYAKCGCLALSRAVFDRLP 542
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 189/409 (46%), Gaps = 42/409 (10%)
Query: 149 KQLHCLAIYCGFDHYAS--VNNSLLTCYSRNGFLDEAKRVFYEMGE-IKDEVSWNSMVVA 205
+ +H A+ G H S V N+LLT Y+R G L A VF + + D VS+NS++ A
Sbjct: 77 RAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISA 136
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG----GLQFHAHLIKSG 261
R AL + M++ L +TL S+L A + L G + HA +K+G
Sbjct: 137 LCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNG 196
Query: 262 F---HQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIP-QPDLVLWNTMISGYSQKEEYSD 316
HQ + L+ +YA+ G + D ++F P + D+V WNTM+S Q + D
Sbjct: 197 LLHGHQRFAF-NALLSMYARL-GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMF-D 253
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNAL 375
+A+ + +G PD +F + ACS L +G+++HA IK + + V +AL
Sbjct: 254 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 313
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTV--SLNSMIAGYAQHGIGMEALRLFEWM-LETNIP 432
V MY+ + AR++FD +P+ N+MI GYAQ G+ EALRLF M E
Sbjct: 314 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 373
Query: 433 PTNITFVSVLSACAHTGKVA--EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P T SVL ACA + A E + + + M G + ++D+ R GK TD
Sbjct: 374 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV---QNALMDMYARLGK-TDV 429
Query: 491 ERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVP 522
R I AM P + A + A QLE VP
Sbjct: 430 ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 478
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFK 120
AN F + L+ YA ++ ARQ+FD +P L +N +I YA G E AL LF
Sbjct: 305 ANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFA 364
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E F T++ ++ A + + + +H + G V N+L+ Y+R
Sbjct: 365 RMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL 424
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG---LDMYTL 234
G D A+R+F M ++ D VSWN+++ +A QL +EM L+ G + TL
Sbjct: 425 GKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 483
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L L G + H + ++ + +GS L+D+YAKC G + VF+ +P
Sbjct: 484 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC-GCLALSRAVFDRLP 542
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN 346
+ + + WN +I Y +A F ++ G P++ +F+ ++ACS+
Sbjct: 543 RRNTITWNVLIMAYGM-HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 594
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 13/252 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ YAR + AR++F + PD+VS+NTLI+ G A L ++M+
Sbjct: 410 NRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ 469
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ + G + + + C I K++H A+ D +V ++L+ Y++
Sbjct: 470 Q--LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAK 527
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLA 235
G L ++ VF + ++ ++WN +++AYG H G EA LF M S + + T
Sbjct: 528 CGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 586
Query: 236 SILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSG-DMRDCMKVFEEI 293
+ L A + + GLQ FHA G I + ++D+ + D M E
Sbjct: 587 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMET 646
Query: 294 PQPDLVLWNTMI 305
+ + W+TM+
Sbjct: 647 GEQQVSAWSTML 658
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 46/220 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+ + F++
Sbjct: 482 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
N ++NVL+ AY A LFD++ +P+ V++ ++A + G +
Sbjct: 542 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 601
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY- 174
L LF M DH +L C
Sbjct: 602 LQLFHAMER------------------------------------DHGVEPTPDILACVV 625
Query: 175 ---SRNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHR 210
R G LDEA + M + +VS W++M+ A HR
Sbjct: 626 DILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHR 665
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 61/272 (22%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIAGYAQHGIGMEALRLF-EW- 425
+V NAL+ Y++CG L A +F + + H+ VS NS+I+ AL LF W
Sbjct: 95 AVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWD 144
Query: 426 --------MLETNIPPTNITFVSVLSACAHTGKVAEG-----QKYFSMMKDMFGFEPEGE 472
ML P T+ T VSVL A +H A + + +K+ +
Sbjct: 145 HALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRF 204
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
++ ++ + R G + DA+RL PG + V + + ++
Sbjct: 205 AFNALLSMYARLGLVADAQRLFAGA--TPGR--------------GDVVTWNTMVSVLVQ 248
Query: 533 SGKWEEVATIRRLMRDRGVQKK--------PGFSWIE---VKKQMHVFVAEDGSHPMIKE 581
SG ++E M GV+ P S +E V ++MH +V +D
Sbjct: 249 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSF 308
Query: 582 IHNYLEEMSRKMKQAG-------YVPDKEKRL 606
+ + L +M +Q G VPD K+L
Sbjct: 309 VASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/534 (36%), Positives = 316/534 (59%), Gaps = 35/534 (6%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y + G + +A+ VF +M +D VSW ++ Y Q+ EA+ L +M+ + + +T
Sbjct: 2 YCKCGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A + G Q HA +K + ++ ++GS L+D+YA+C M + VF+ +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCE-QMDMAIMVFDRL 119
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ V WN +I+G+++K + + L F ++ R G+ ++ + SA + + G
Sbjct: 120 VSKNEVSWNALIAGFARKAD-GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +HA IK + V N ++ MY+K G++ DAR++FDRM + + V+ N+M+ AQ
Sbjct: 179 RWVHAHLIKSGQKLTAF-VGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQ 237
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+G+G EA+ FE + + I ITF+SVL+AC+H G V EG+ YF MMKD + +PE +
Sbjct: 238 YGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEID 296
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQL 515
HY +DLLGRAG L +A + MP P + AA+H +L
Sbjct: 297 HYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFEL 356
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+P + P V+L NIYA++GKW + A +R++M+ GV+K+P SW++++ +H+FVA+D +
Sbjct: 357 DPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDT 416
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTS 623
HP +I+ EE++ ++K+AGYVP ++E +L +HSEK+A+AF L++
Sbjct: 417 HPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMP 476
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I +MKN+RICGDCH+A K++S + REI VRDT RFH F +G CSCGDYW
Sbjct: 477 AGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 34/273 (12%)
Query: 13 RDLVTGKSLHALYLKNLVPFSA-----------YLSNHFILL-----YSKCGCLSAAHH- 55
RD+V+ L A Y +N +P A + N F CG S
Sbjct: 21 RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQM 80
Query: 56 ---AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
A +V+ + LL YAR ++ A +FD++ + VS+N LI+ +A D
Sbjct: 81 HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADG 140
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
E+ L F +M+ F FT S + +A + L + +H I G A V N++
Sbjct: 141 ETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTM 200
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y+++G + +A++VF M + +D V+WN+M+ A Q+ G EA+ F+E+ + L+
Sbjct: 201 LGMYAKSGSMVDARKVFDRMDK-RDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 259
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
T S+LTA + H L+K G H
Sbjct: 260 QITFLSVLTACS-----------HGGLVKEGKH 281
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY KCG + DAR +FD+MP + VS +IAGYAQ+ + EA+ L ML P T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 438 FVSVLSACAHTGKVAEGQK 456
F S+L A G + G++
Sbjct: 61 FTSLLKATGACGGCSIGEQ 79
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H Q F N +L YA+ + AR++FD++ + DLV++NT+++A A G +
Sbjct: 184 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKE 243
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGF------DHYASVNN 168
A++ F+++R+ + T ++TA S+ + + H + + DHY S +
Sbjct: 244 AVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVD 303
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
L R G L EA ++M W +++ A H+
Sbjct: 304 LL----GRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHK 341
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/706 (35%), Positives = 365/706 (51%), Gaps = 93/706 (13%)
Query: 24 LYLKNLVPFSAYLSNHFILLY-------------SKCGCLSAAHHAFNQTQHANVFSFNV 70
L + L P S S H +L+ S+ C ++ A + AN
Sbjct: 166 LAFRRLRPMSTSASPHTSILHLPHRPFVFRRPRLSRLRCFASLAPASSGASPANDDHLIQ 225
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR-EKRFDT 129
+L A+ R +A A L +P P +Y +L+ A A DT A ++ + + + F +
Sbjct: 226 MLCAHGR---LAQATALLQGLPAPTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRS 282
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
D F + LI A YA+++ L A++VF E
Sbjct: 283 DPFLSTRLIEA----------------------YAALSA-----------LPAARQVFDE 309
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA-----SILTAFTSL 244
+K+ WN+M+ A G EAL +M L + +D Y+ A I + + L
Sbjct: 310 -APVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHL 368
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+ HAH I+ G+ ++H+ + LID YAK G + +VF +P +LV W+ M
Sbjct: 369 PASARVREMHAHAIRRGYGLHTHVATTLIDCYAKL-GIVSYAERVFTSMPDRNLVSWSAM 427
Query: 305 ISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
I Y++ E D A+ F+++ + P+ + V V+ AC+ ++ GK +HA ++
Sbjct: 428 IGCYAKNERPGD-AIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILR 486
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEAL 420
+SV NAL+AMY KCG LE R +F+ + N VS NS+I+GY HG G E+L
Sbjct: 487 RGF-DLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESL 545
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
++FE M+E I P ITFVSVL AC+H G V +G+K F M + + P EHY+CM+DL
Sbjct: 546 QVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDL 604
Query: 481 LGRAGKLTDAERLIEAMPFNP-----GSI------------ALKAANHFLQLEPSNAVPY 523
LGRAG+L +A LI++M P GS+ A A +H LEP NA Y
Sbjct: 605 LGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNY 664
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+LA+IYA + +V ++ L+ + ++K PG SWIEVKK+++ FV+ D +P ++E+
Sbjct: 665 VLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQ 724
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
+ E +MK GYVPD KE+ L+ HSEKLAVAFGL+ T GE I +
Sbjct: 725 ALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRIT 784
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH+ KFIS REI VRD RFH F++G CSC DYW
Sbjct: 785 KNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 132/293 (45%), Gaps = 35/293 (11%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
+ +HA ++ +++ I Y+K G +S A F N+ S++ ++ YA+
Sbjct: 375 REMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKN 434
Query: 79 LRIASARQLFDQI--PQPDLVSYN-TLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
R A Q+F ++ DLV + T++S C
Sbjct: 435 ERPGDAIQIFQEMMASDADLVPNSITIVSVLHAC-------------------------- 468
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
A N L K LH + GFD SV N+L+ Y + G L+ + +F +G ++
Sbjct: 469 ----AGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRN 524
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VSWNS++ YG H G E+LQ+F+EM+ + ++ T S+L A + + + G +
Sbjct: 525 VVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFE 584
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
+++ + + ++DL + +G + + +++ + + QP +W +++
Sbjct: 585 SMVEYNVTPRAEHYACMVDLLGR-AGRLDEAVELIQSMRIQPSPQVWGSLLGA 636
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G L GK LHA L+ + N + +Y KCGCL + FN
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 61 -QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESA 115
+ NV S+N L++ Y + Q+F+++ + P+++++ +++ A + G E
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579
Query: 116 LSLFKDMRE 124
LF+ M E
Sbjct: 580 KKLFESMVE 588
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/714 (34%), Positives = 379/714 (53%), Gaps = 79/714 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYS-KCGCLSAAHHAFNQ 59
TF Q+L+ C+ R + K++ A LK+ P LS ++ S KCG
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVE--LSGSKLVDASLKCG----------- 95
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
I ARQLFD +P+ +V++N++I+ Y ++ A+ ++
Sbjct: 96 --------------------EIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMY 135
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQL---HCLAIYCGFD-HYASVNNSLLTCYS 175
+ M D +TLS + A S+ L L K+ H LA+ G + V ++L+ Y
Sbjct: 136 RLMISNNVLPDEYTLSSVFKAFSD-LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 194
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G EAK V + E KD V +++V Y Q E EA++ FQ M+ ++ + YT A
Sbjct: 195 KFGKTREAKLVLDRVEE-KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYA 253
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L + +L+D+ G H ++KSGF + L+ +Y +CS + D + VF+ I
Sbjct: 254 SVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL-VDDSLLVFKCIKY 312
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
P+ V W ++ISG Q + AL F+K+ R P+ + + CSNL+ G+Q
Sbjct: 313 PNQVTWTSLISGLVQNGR-EETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQ 371
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H + K ++ + + L+ +Y KCG + AR +FD + E + +SLN+MI YAQ+G
Sbjct: 372 VHGIVSKYGFDRDKYA-GSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 430
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKDMFGFEPEGEH 473
G EAL LFE M+ + P ++T +SVL AC ++G V EG + F S KD +H
Sbjct: 431 FGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIML--TNDH 488
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y+CM+D+LGRAG+L +AE LI + NP +A + L++
Sbjct: 489 YACMVDMLGRAGRLEEAEMLITEVT-NPDLVLWRTLLSACKVHRKVEMAERITRKILEIA 547
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GS 575
P + ++L+N+YA++GKW+ V ++ M++ ++K P SW+E+ K+ H F+A D S
Sbjct: 548 PGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFS 607
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
HP ++I LEE+ +K K GYV D KE+ L HSEKLA+AF + +
Sbjct: 608 HPNSEQILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-N 666
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I ++KNLR+C DCH+ IK +S I REI RD+ RFH F+DG CSCGDYW
Sbjct: 667 VGGSIRILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 345/642 (53%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL YA R A +F Q+P DL+S+N+L++++ + G + AL L M
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T + + A + + + LH L + G + + N+L++ Y + G + E++RV
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
+M +D V+WN+++ Y + + +AL FQ M + + T+ S+L+A D
Sbjct: 420 LLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 247 LVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L+ G HA+++ +GF + H+ + LI +YAKC GD+ +F + +++ WN M+
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC-GDLSSSQDLFNGLDNRNIITWNAML 537
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+ + + ++ L K+ G D SF +SA + L+ G+Q+H L +K+
Sbjct: 538 AANAH-HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 596
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ + NA MYSKCG + + ++ + S N +I+ +HG E F
Sbjct: 597 EHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
MLE I P ++TFVS+L+AC+H G V +G Y+ M+ FG EP EH C+IDLLGR+
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G+L +AE I MP P + KAA + +LEP + YV+ +
Sbjct: 716 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 775
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N++A +G+WE+V +R+ M + ++KK SW+++K ++ F D +HP EI+ LE
Sbjct: 776 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 835
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + +K++GYV D KE L +HSE+LA+A+ L+ST G + + KNLR
Sbjct: 836 DIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLR 895
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IC DCH+ KF+S + GR I +RD YRFH F+ G CSC DYW
Sbjct: 896 ICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 231/470 (49%), Gaps = 20/470 (4%)
Query: 38 NHFILLYSKCGCL---SAAHHAFNQTQHANVFSF----NVLLAAYARQLRIASARQLFDQ 90
N L+ S CG L S Q + + S N L++ + A +FDQ
Sbjct: 161 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ 220
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLI 148
+ + D +S+N++ +AYA G E + +F MR + + T+S L++ ++
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 280
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+ +H L + GFD V N+LL Y+ G EA VF +M KD +SWNS++ ++
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM-PTKDLISWNSLMASFVN 339
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
L+AL L M+S ++ T S L A + + G H ++ SG N I
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ L+ +Y K G+M + +V ++P+ D+V WN +I GY++ E+ D+AL F+ +
Sbjct: 400 GNALVSMYGKI-GEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-PDKALAAFQTMRVE 457
Query: 329 GYHPDDCSFVCVISACSNLSPS----LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G + + V V+SAC L P GK +HA + S+ V N+L+ MY+KCG+
Sbjct: 458 GVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMYAKCGD 514
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L ++ LF+ + N ++ N+M+A A HG G E L+L M + +F LSA
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
A + EGQ+ + + GFE + ++ D+ + G++ + +++
Sbjct: 575 AAKLAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 209/433 (48%), Gaps = 19/433 (4%)
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y + R+ AR LFD +P + VS+NT++S G + F+ M + F +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 135 SGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+ L+TA + + + Q+H G V+ ++L Y G + +++VF EM
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+ ++ VSW S++V Y E E + +++ M +G + +++ ++++ L+D G
Sbjct: 122 D-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q ++KSG + + LI + G++ +F+++ + D + WN++ + Y+Q
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSM-GNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRIS 370
+ +++ F + R + + ++S ++ G+ IH L +K+ S +
Sbjct: 240 G-HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVC 297
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N L+ MY+ G +A +F +MP + +S NS++A + G ++AL L M+ +
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 431 IPPTNITFVSVLSAC-----AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
+TF S L+AC G++ G ++ +F + G + ++ + G+ G
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHG---LVVVSGLFYNQIIG---NALVSMYGKIG 411
Query: 486 KLTDAERLIEAMP 498
+++++ R++ MP
Sbjct: 412 EMSESRRVLLQMP 424
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C+ DL+ GK LHA + ++ N I +Y+KCG LS++ FN
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ N+ ++N +LAA A G E L L
Sbjct: 525 LDNRNIITWNAMLAANAHH-------------------------------GHGEEVLKLV 553
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR D F+ S ++A++ L +QLH LA+ GF+H + + N+ YS+
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + E ++ + SWN ++ A G+H E F EM+ + + T S+
Sbjct: 614 GEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
LTA + + GL ++ + + G +IDL + SG + + ++P +
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR-SGRLAEAETFISKMPMK 731
Query: 296 PDLVLWNTMIS 306
P+ ++W ++++
Sbjct: 732 PNDLVWRSLLA 742
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY+K G ++ AR LFD MP N VS N+M++G + G+ +E + F M + I P++
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 438 FVSVLSACAHTGKV-AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
S+++AC +G + EG + + G + + ++ L G G ++ + ++ E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 497 MPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
MP N V + L Y+ G+ EEV I + MR GV
Sbjct: 120 MP------------------DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV 156
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/571 (36%), Positives = 319/571 (55%), Gaps = 35/571 (6%)
Query: 138 ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
+ ++ +L ++Q H + G ++ LLT G + +R+F + + D
Sbjct: 16 VVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSD-PDSF 74
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
+NS++ A L+A+ ++ M+ ++ YT S++ A L L G H+H+
Sbjct: 75 LFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHV 134
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
SG+ NS + + L+ YAK S R KVF+E+PQ ++ WN+MISGY Q + +
Sbjct: 135 FVSGYASNSFVQAALVTFYAK-SCTPRVARKVFDEMPQRSIIAWNSMISGYEQNG-LASE 192
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F K+ G PD +FV V+SACS L S LG +H + IR N + + +LV
Sbjct: 193 AVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMN-VVLATSLV 251
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
M+S+CG++ AR +FD M E N VS +MI+GY HG G+EA+ +F M + P +
Sbjct: 252 NMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRV 311
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T+V+VLSACAH G + EG+ F+ MK +G P EH+ CM+D+ GR G L +A + +
Sbjct: 312 TYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRG 371
Query: 497 MP---FNPG---------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
+ P + ++ A + + EP N YV+L+N+YA +G+ +
Sbjct: 372 LSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDR 431
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
V ++R +M RG++K+ G+S I+V+ + ++F D SHP EI+ YL+E+ + K AGY
Sbjct: 432 VESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGY 491
Query: 599 VPDKEK------------RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
P E L +HSEKLAVAFGL+ T +G + ++KNLRIC DCH+AIKF
Sbjct: 492 APAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKF 551
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS + REI VRD RFH F++G CSC DYW
Sbjct: 552 ISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 35/344 (10%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F +N F L+ YA+ AR++FD++PQ ++++N++IS Y G
Sbjct: 133 HVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASE 192
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F MRE + D T +++A S +L L LH + G + SL+
Sbjct: 193 AVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVN 252
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
+SR G + A+ VF M E + VSW +M+ YG H G+EA+++F M + + +
Sbjct: 253 MFSRCGDVGRARAVFDSMNE-GNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRV 311
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------LIDLYAKCSGDMRDC 286
T ++L+A GL L+ + Q + G ++D++ + G + +
Sbjct: 312 TYVAVLSACAH-----AGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGR-GGLLNEA 365
Query: 287 MKVFEEIPQPDLV--LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+ + +LV +W M+ + + LG N + P++ ++S
Sbjct: 366 YQFVRGLSSEELVPAVWTAMLGACKMHKNFD---LGVEVAENLISAEPENPGHYVLLSNM 422
Query: 345 SNLSP---------------SLGKQIHALTIKIEIRSNRISVNN 373
L+ L KQ+ TI +E RS S+ +
Sbjct: 423 YALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGD 466
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 153/388 (39%), Gaps = 76/388 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G LH + + + L+ + ++S+CG + A F+
Sbjct: 211 TFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSM 270
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV S+ +++ Y A ++F ++ P+ V+Y ++SA A G
Sbjct: 271 NEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGR 330
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+F M+++ G++ +++C++ + R
Sbjct: 331 LVFASMKQEY---------GVVPGVEHHVCMVDM-----------------------FGR 358
Query: 177 NGFLDEAKRVFYEMGEIKDEV---SWNSMVVAYGQHREGLEALQLFQEMVSLQ------- 226
G L+EA + + G +E+ W +M+ A H+ +++ + ++S +
Sbjct: 359 GGLLNEAYQ--FVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHY 416
Query: 227 -LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL----YAKCSG 281
L +MY LA + S+ ++ +I+ G + +G ID+ Y G
Sbjct: 417 VLLSNMYALAGRMDRVESVRNV---------MIQRGLKK--QVGYSTIDVENRSYLFSMG 465
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI 341
D + + E D ++W +GY+ E + L ++ + YH + +
Sbjct: 466 D-KSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLA----- 519
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRI 369
++ L K H +T++I +++ RI
Sbjct: 520 -----VAFGLMKTCHGVTLRI-VKNLRI 541
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 316/581 (54%), Gaps = 37/581 (6%)
Query: 127 FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+DT F S L S NL ++Q+H G +V N LL Y G L++A+ +
Sbjct: 51 YDTKRFRSSLL---SCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQEL 107
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + + SW+ +V Y + +F+E++ LD Y+ ++ A L+D
Sbjct: 108 FDGMSK-RHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKD 166
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G H +K G + + L+D+YA+C + D ++F ++ + DL W MI
Sbjct: 167 LKCGRLIHCITLKCGLDYGHFVCATLVDMYARCK-VVEDAHQIFVKMWKRDLATWTVMIG 225
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
++ ++L F ++ G PD + V V+ AC+ L + K IHA I
Sbjct: 226 ALAE-SGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAY-INGTGY 283
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S + + A++ MY+KCG++E AR +FDRM N ++ ++MIA Y HG G +AL LF
Sbjct: 284 SLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPM 343
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML + I P ITFVS+L AC+H G + EGQ++FS M D +G P+ +HY+CM+DLLGRAG
Sbjct: 344 MLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 403
Query: 486 KLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLAN 528
+L +A +IE MP + A + A L+L+ YV+L+N
Sbjct: 404 RLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSN 463
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +GKWE++A R LM G++K PG +WIEV ++++ F D +HP EI+ L+
Sbjct: 464 IYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKR 523
Query: 589 MSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRI 636
+ K++ AGY PD K+ L HSEKLA+AFGLL G PI + KNLR+
Sbjct: 524 LGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRV 583
Query: 637 CGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CGDCH KF+S I + I VRD RFH FK+G CSC DYW
Sbjct: 584 CGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 140/307 (45%), Gaps = 37/307 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C +DL G+ +H + LK + + ++ + +Y++C + AH
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAH---------- 206
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
Q+F ++ + DL ++ +I A A+ G +L F MR
Sbjct: 207 ---------------------QIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRN 245
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ D L ++ A + + K +H G+ + +++ Y++ G ++
Sbjct: 246 QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVES 305
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M ++++ ++W++M+ AYG H +G +AL+LF M+ + + T S+L A +
Sbjct: 306 ARWIFDRM-QVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACS 364
Query: 243 SLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVL 300
+ G +F + + G + + ++DL + +G + + +++ E +P + D VL
Sbjct: 365 HAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGR-AGRLDEALEMIEGMPVEKDEVL 423
Query: 301 WNTMISG 307
W ++
Sbjct: 424 WGALLGA 430
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V+ C + K++HA L I +Y+KCG + +A F++ Q N
Sbjct: 258 VVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRN 317
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
V +++ ++AAY + A +LF + + P+ +++ +L+ A + G E F
Sbjct: 318 VITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFS 377
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M +D G T +K C+ G R G L
Sbjct: 378 SM----WDEYGVTPD------------VKHYTCMVDLLG----------------RAGRL 405
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
DEA + M KDEV W +++ A HR A ++ + ++ LQ
Sbjct: 406 DEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQ 451
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/640 (34%), Positives = 341/640 (53%), Gaps = 60/640 (9%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
+L ++ HA LK+ V +L N + Y++ G L A F++ N FS+N LL+
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYA--DCGDTESALSLFKDMREKRFDTDG 131
AYAR R AR LF+ IP PD SYN +++A A G AL M F +
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNA 151
Query: 132 FTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
++ + ++A + + +Q+H L + ++L+ Y++ ++A+RVF
Sbjct: 152 YSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDA 211
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M E ++ VSWNS++ Y Q+ EAL LF EM++ D TL+S+++A L
Sbjct: 212 MPE-RNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADRE 270
Query: 250 GLQFHAHLIK-SGFHQNSHIGSGLIDLYAKC----------------------------- 279
G Q HAH++K + + + L+D+YAKC
Sbjct: 271 GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYA 330
Query: 280 -SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
S ++ D VF ++ + +++ WN +I+ Y+Q E ++A+ F +L R P ++
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGE-EEEAIRLFVQLKRDSIWPTHYTYG 389
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAMYSKCGNLEDARRLF 392
V++AC N++ LG+Q H +K R + + V N+LV MY K G+++D ++F
Sbjct: 390 NVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 449
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+RM + VS N+MI GYAQ+G +AL LFE ML +N P ++T + VLSAC H+G V
Sbjct: 450 ERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVD 509
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---- 508
EG++YF M + G P +HY+CM+DLLGRAG L +AE LI MP P S+ +
Sbjct: 510 EGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGA 569
Query: 509 -------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
A +L+P N+ PYV+L+N+YA GKW EV +RR M+DRGV K+P
Sbjct: 570 CRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQP 629
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
G SWIE+ ++M+VF+A D HP EIHN L + +M +
Sbjct: 630 GCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEMGR 669
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 227/487 (46%), Gaps = 41/487 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C +D TG+ +H L ++ ++ + + +Y+KC A F+
Sbjct: 153 SFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAM 212
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
NV S+N L+ Y + + A LF ++ PD V+ ++++SA A
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGR 272
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY---CGFDHYASVN----NS 169
+ M + D L NN + C + C FD S + S
Sbjct: 273 QVHAHMVKCDRLRDDMVL--------NNALVDMYAKCGRTWEARCIFDSMPSRSIVSETS 324
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+LT Y+++ +++A+ VF +M E K+ ++WN ++ AY Q+ E EA++LF ++ +
Sbjct: 325 ILTGYAKSANVEDAQVVFSQMVE-KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWP 383
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF------HQNSHIGSGLIDLYAKCSGDM 283
YT ++L A ++ DL G Q H H++K GF + +G+ L+D+Y K +G +
Sbjct: 384 THYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK-TGSI 442
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
D KVFE + D V WN MI GY+Q D AL F+++ +PD + + V+SA
Sbjct: 443 DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD-ALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 344 C--SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNT 400
C S L + H++T I +R +V + + G+L++A L + MP E ++
Sbjct: 502 CGHSGLVDEGRRYFHSMTEDHGITPSRDHY-TCMVDLLGRAGHLKEAEELINDMPMEPDS 560
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEW----MLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
V S++ H + + L EW + E + P + +V + + A GK AE +
Sbjct: 561 VLWASLLGACRLH----KNVELGEWTAGRLFELD-PQNSGPYVLLSNMYAEMGKWAEVFR 615
Query: 457 YFSMMKD 463
MKD
Sbjct: 616 VRRSMKD 622
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 258/722 (35%), Positives = 369/722 (51%), Gaps = 106/722 (14%)
Query: 33 SAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP 92
+A+ N + Y++ G L A F++T + +V S+N +L+ YAR A+ FD++P
Sbjct: 22 TAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGMLSGYARYGSFRDAKLFFDEMP 81
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLH 152
+ VSYNTLISA+A G+ A +LF M+ + D T + LI A CL H
Sbjct: 82 YKNTVSYNTLISAFARQGNLAEARNLFNSMKIR----DAATWNVLI-AGYTQRCLCT--H 134
Query: 153 CLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
I FD N N+++ Y++ G LD A +F M + +EV WN+++ G+
Sbjct: 135 AREI---FDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQW-NEVCWNALISGMGR 190
Query: 209 HREGLEALQLFQ-----EMVS-------------LQLGLDMY-----TLASILTAFTSLE 245
+R +AL+LFQ +MVS L D++ T I TA +
Sbjct: 191 NRRLPDALELFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLFKRMPLTDVVIWTAIVTAF 250
Query: 246 DLVGGLQ-----FHAHLIKS-----------GFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
G LQ F A IK G H L D +GD+RD
Sbjct: 251 AHSGFLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFD----SAGDLRD---- 302
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
++ WN +++ +SQ ++ QALG F ++ G HPD SFV + AC+ L+
Sbjct: 303 --------VISWNALLAAFSQNG-HARQALGIFAGMDLEGIHPDGISFVSALDACTILTA 353
Query: 350 -SLGKQIHA---LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
GK +H L + EI S+ ALV Y+KCG L++AR LFD M + + LNS
Sbjct: 354 LREGKLLHEELLLASQGEIFVE-ASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNS 412
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
M+ YAQ G EA LF+ + + I P +TFVS++SAC+H G + G +YF + F
Sbjct: 413 MLGAYAQSGRAGEAADLFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDF 472
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA----------------- 508
P HY+CM+DLL R G L D E L++AMPF P A K+
Sbjct: 473 ALAPHAAHYTCMVDLLARTGHLMDGEDLLDAMPFQPEYTAWKSLLAGCRTHGDVGRGARL 532
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A P + PYV+L+ +Y A+GK + ++R+ M R ++K G S I +K + H
Sbjct: 533 ARRATNANPVCSSPYVLLSRLYDAAGKHGDGISVRKAMDARRLRKPAGLSSITIKGRAHE 592
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
FVA +HP I I + L ++ KM++AGYVPD KE+ L HSEKLAV
Sbjct: 593 FVAGGKNHPEISAILDELHSLNAKMREAGYVPDTSNVLHDFDDEEKEQSLSFHSEKLAVV 652
Query: 617 FGLLST-SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
FG++ST +P+ V+KNLR+C DCH A KF+S IA R ITVRD +RFH F+DG C+C D
Sbjct: 653 FGMISTRGRSDPLFVVKNLRMCTDCHTATKFMSRIAKRAITVRDAHRFHHFQDGACACAD 712
Query: 676 YW 677
+W
Sbjct: 713 FW 714
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 140/333 (42%), Gaps = 58/333 (17%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKC---GCLSAAHHAFNQTQHANVFSFNVLLAAYARQL 79
AL L +PF +S +I + C G L A F + +V + ++ A+A
Sbjct: 197 ALELFQALPFRDMVS--WIAMIQGCVHSGDLHRAWDLFKRMPLTDVVIWTAIVTAFAHSG 254
Query: 80 RIASARQLFDQIPQP--------------------------------DLVSYNTLISAYA 107
+ AR LFD IP D++S+N L++A++
Sbjct: 255 FLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFDSAGDLRDVISWNALLAAFS 314
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI-------KQLH---CLAIY 157
G AL +F M D +G G+ S+ + C I K LH LA
Sbjct: 315 QNGHARQALGIFAGM-----DLEGIHPDGISFVSALDACTILTALREGKLLHEELLLASQ 369
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
AS+ +L+ Y++ G LDEA+ +F M D + NSM+ AY Q EA
Sbjct: 370 GEIFVEASLATALVNFYAKCGRLDEARSLFDAMA-FCDAILLNSMLGAYAQSGRAGEAAD 428
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDL 275
LFQ + + D T S+++A + L G ++ L+ F H + ++DL
Sbjct: 429 LFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGD-FALAPHAAHYTCMVDL 487
Query: 276 YAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
A+ +G + D + + +P QP+ W ++++G
Sbjct: 488 LAR-TGHLMDGEDLLDAMPFQPEYTAWKSLLAG 519
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 36/280 (12%)
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y +C G + D + F+ I P N M++ Y+Q Y D A F + + D
Sbjct: 1 MYGRC-GCVADAVICFDSIRNPTAFSHNVMVAAYAQN-GYLDLAARTFDRTP----NKDV 54
Query: 335 CSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
S+ ++S + G A E+ N L++ +++ GNL +AR LF+
Sbjct: 55 VSWNGMLSGYAR----YGSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNS 110
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
M + + N +IAGY Q + A +F+ N+ +T+ +++ A G
Sbjct: 111 MKIRDAATWNVLIAGYTQRCLCTHAREIFDRAPVRNV----VTWNTMIGGYAQAG----- 161
Query: 455 QKYFSMMKDMFGFEPEGEH--YSCMIDLLGRAGKLTDAERLIEAMPFNP--GSIAL---- 506
+ ++FG P+ ++ +I +GR +L DA L +A+PF IA+
Sbjct: 162 --HLDNATELFGLMPQWNEVCWNALISGMGRNRRLPDALELFQALPFRDMVSWIAMIQGC 219
Query: 507 -------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
+A + F ++ ++ V + + +A SG +E
Sbjct: 220 VHSGDLHRAWDLFKRMPLTDVVIWTAIVTAFAHSGFLQEA 259
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 313/542 (57%), Gaps = 35/542 (6%)
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+N L+ Y R G L A++VF EM + K +WN+M+ Q E L LF+EM L
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
D YTL S+ + L + G Q H + IK G + + S L +Y + +G ++D
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR-NGKLQDG 145
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
V +P +LV WNT+I G +Q + L +K + G P+ +FV V+S+CS+
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 347 LS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ G+QIHA IKI S +V ++L++MYSKCG L DA + F + + V +S
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVV-AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 406 MIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
MI+ Y HG G EA+ LF M E TN+ + F+++L AC+H+G +G + F MM +
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALK 507
+GF+P +HY+C++DLLGRAG L AE +I +MP +A +
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
LQ++P+++ YV+LAN++A++ +W +V+ +R+ MRD+ V+K+ G SW E K ++H
Sbjct: 384 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
F D S KEI++YL+E++ +MK GY PD KE LV HSEKLAV
Sbjct: 444 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAV 503
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AF L+ G PI ++KNLR+C DCH A K+IS I REIT+RD RFH F +G+CSCGD
Sbjct: 504 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 563
Query: 676 YW 677
YW
Sbjct: 564 YW 565
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 205/427 (48%), Gaps = 11/427 (2%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
+YSK G +A + + + N S N+L+ Y R + +AR++FD++P L ++N +
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF 160
I+ E LSLF++M F D +TL + + S+ ++ + +Q+H I G
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
+ VN+SL Y RNG L + + V M +++ V+WN++++ Q+ L L++
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
M + T ++L++ + L G Q HA IK G + S LI +Y+KC
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC- 240
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVC 339
G + D K F E D V+W++MIS Y + D+A+ F + + ++ +F+
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ-GDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 340 VISACSNLSPSLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP- 396
++ ACS+ S K + + +E + + + +V + + G L+ A + MP
Sbjct: 300 LLYACSH-SGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + V ++++ H A R+F+ +L+ + P + +V + + A + + +
Sbjct: 359 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID-PNDSACYVLLANVHASAKRWRDVSE 417
Query: 457 YFSMMKD 463
M+D
Sbjct: 418 VRKSMRD 424
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C G+ +HA +K + + I +YSKCGCL A AF++
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-----DLVSYNTLISAYADCGDTESA 115
+ + ++ +++AY + A +LF+ + + + V++ L+ A + G +
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF M EK GF G HY V + L
Sbjct: 314 LELFDMMVEKY----GFK------------------------PGLKHYTCVVDLL----G 341
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LD+A+ + M D V W +++ A H+ A ++F+E++ +
Sbjct: 342 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 351/650 (54%), Gaps = 77/650 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++L +C+ R + +HA L ++ N I +Y KC CL A F++
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N F++N L++ + + A +LF +P+PD S+N+++S +A E +L F
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + F + ++ ++A + +L + Q+H L + + ++L+ YS+ G
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+ VF M E ++ V+WNS++ Y Q+ EAL++F M+ L D TLAS+++
Sbjct: 198 VACAEEVFSGMIE-RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVS 256
Query: 240 AFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCS------------------ 280
A SL L GLQ HA ++K+ F + +G+ L+D+YAKCS
Sbjct: 257 ACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVV 316
Query: 281 ------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
++ +F ++ Q ++V WN +I+GY+Q E +++AL F+ L R
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGE-NEEALRLFRLLKRE 375
Query: 329 GYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P +F NL S I V N+L+ MY KCG++ED
Sbjct: 376 SIWPTHYTF-------GNLLKS-----------------DIFVGNSLIDMYMKCGSIEDG 411
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R+F++M E + VS N++I GYAQ+G G EAL++F ML P ++T + VL AC+H
Sbjct: 412 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 471
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-- 506
G V EG+ YF M++ G P +HY+CM+DLLGRAG L +A+ LIEAMP NP ++
Sbjct: 472 GLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 530
Query: 507 ---------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
AA L+++P N+ PYV+L+N+YA G+W +V +R+LMR +GV
Sbjct: 531 LLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGV 590
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
K+PG SWIEV+ ++HVF+ +D SHP K+I++ L+ ++ +MK+ GY+PD
Sbjct: 591 TKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 640
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 325 LNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
L R Y P+ F ++ +C + G ++ I + S I + N L+ +Y KC
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L+DAR+LFDRMP+ NT + NS+I+ + G EA RLF M E P ++ S++S
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSMVSG 121
Query: 445 CAHTGKVAEGQKYFSMM 461
A + E +YF M
Sbjct: 122 FAQHDRFEESLEYFVKM 138
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 322/599 (53%), Gaps = 65/599 (10%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-NGFLDEAKRVFYEMGEIKDEVSWNS 201
NL IKQ+H + G D V L+ ++ N +D + + +N+
Sbjct: 57 KNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNA 116
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH-LIKS 260
++ Y E+ + + M + +T ++ A + D+ G Q H ++
Sbjct: 117 LIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVG 176
Query: 261 GFHQNSHIGSGLIDLYAKC------------------------------SGDMRDCMKVF 290
GF ++ H+G+ +ID+Y KC SG+M ++F
Sbjct: 177 GFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELF 236
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+ +P D+V W M+SG++Q + +A+ F+K+ G D+ + + VISAC+ L +
Sbjct: 237 DGLPVKDMVAWTVMVSGFAQNAK-PREAIMFFEKMQEFGVETDEITLIGVISACAQLGAA 295
Query: 351 -LGKQIHALTIKIEIRS-NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
I + K E + + V +AL+ MYSKCG++ DA R+F M E N S +SMI
Sbjct: 296 KYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMIL 355
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G+A HG +A++LF+ M++T I P +TF+ VL+AC+H G V +G + F +M+ +G +
Sbjct: 356 GFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIK 415
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANH 511
P +HY+CM+DLLGRAG+L +A L++ MP P IA AANH
Sbjct: 416 PSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANH 475
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM-HVFV 570
+LEP Y++LANIYA+ G+W +V+T+R+LMR RG++K P FSWIE +K M H F
Sbjct: 476 LFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFF 535
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFG 618
+ D +HP EI LE++ +++ GY P DK + L+ HSEKLA+AFG
Sbjct: 536 SGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFG 595
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ST G I ++KNLRIC DCH+ I S I GREI VRD RFH F DG CSCG++W
Sbjct: 596 LISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF + K C + D+ G+ +H L ++ N I +Y KCG L F++
Sbjct: 148 TFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDE 207
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ +V S+ L++AY + + SA +LFD +P D+V++ ++S +A A+ F
Sbjct: 208 MPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFF 267
Query: 120 KDMREKRFDTDGFTLSGLITA-----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ M+E +TD TL G+I+A ++ I+ + + + G H V ++L+ Y
Sbjct: 268 EKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGG-KHSVVVGSALIDMY 326
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ G + +A RVF M E ++ S++SM++ + H +A++LF EMV ++ + T
Sbjct: 327 SKCGSVGDAYRVFQGMKE-RNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTF 385
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+LTA + + G Q + K G ++ + ++DL + +G +++ ++ + +
Sbjct: 386 IGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGR-AGRLQEAHELVKTM 444
Query: 294 P-QPDLVLWNTMI 305
P +P +W ++
Sbjct: 445 PIEPHGGVWGALL 457
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 183/411 (44%), Gaps = 31/411 (7%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAH--HAFNQTQ 61
Q++ T G ++L K +HA L N + S Y+ I +K + FNQ
Sbjct: 48 QIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVN 107
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN-TLISAYADCGDTESALSLFK 120
+ N F +N L+ Y + R+ + + + + + +V + T + + CG + + L +
Sbjct: 108 YPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACG-AKMDVGLGR 166
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN-------SLLTC 173
+ + GF + S ++ + C + CG + + N L++
Sbjct: 167 QIHGQTILVGGFGEDLHVGNSMIDM----YIKCGFLECGRKVFDEMPNRDVISWTELISA 222
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y ++G ++ A +F + +KD V+W MV + Q+ + EA+ F++M + D T
Sbjct: 223 YVKSGNMESAGELFDGL-PVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEIT 281
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKS-------GFHQNSHIGSGLIDLYAKCSGDMRDC 286
L +++A L G +A I+ G + +GS LID+Y+KC G + D
Sbjct: 282 LIGVISACAQL-----GAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKC-GSVGDA 335
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+VF+ + + ++ +++MI G++ D A+ F ++ + P+ +F+ V++ACS+
Sbjct: 336 YRVFQGMKERNVYSYSSMILGFAMHGRVHD-AMKLFDEMVKTEIKPNRVTFIGVLTACSH 394
Query: 347 LS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
G QI L K +V + + G L++A L MP
Sbjct: 395 AGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMP 445
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/670 (34%), Positives = 357/670 (53%), Gaps = 73/670 (10%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
F+ N L+ YA+ R+ A+ LFD DLVS+NT+IS+ + E AL M +
Sbjct: 221 TFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQ 280
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASV-------NNSLLTCYSRN 177
+G TL+ ++ A S H + CG + +A V NS + C +
Sbjct: 281 SGVRPNGVTLASVLPACS---------HLEMLGCGKEIHAFVLMNNDLIENSFVGCALVD 331
Query: 178 GFLD----EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DM 231
+ + E R+ ++ + WN+M+ Y ++ EA++LF EMV +LGL +
Sbjct: 332 MYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMV-FELGLSPNS 390
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
TL+S+L A E + H+ ++K GF ++ ++ + L+D+Y++ G + +F
Sbjct: 391 VTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRM-GRIEIARSIFG 449
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR------------------VGYHPD 333
+ + D+V WNTMI+GY + D AL + R P+
Sbjct: 450 SMNRKDIVSWNTMITGYVVCGRH-DDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPN 508
Query: 334 DCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ + V+ C+ L+ GK+IHA +K ++ S ++V +ALV MY+KCG L +R +F
Sbjct: 509 SVTLMTVLPGCAALAALGKGKEIHAYAVK-QMLSKDVAVGSALVDMYAKCGCLNLSRTVF 567
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET-----NIPPTNITFVSVLSACAH 447
++M N ++ N +I Y HG G EAL+LF M+E I P +T++++ ++ +H
Sbjct: 568 EQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSH 627
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI--- 504
+G V EG F MK G EP +HY+C++DLLGR+G++ +A LI+ MP N +
Sbjct: 628 SGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAW 687
Query: 505 -----ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
A K + E + +V+ N+ K + + R M+++GV+K+PG SW
Sbjct: 688 SSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQ---SMLGRKMKEKGVRKEPGCSW 744
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLV 607
IE ++H F+A D SHP KE+H YLE +S +MK+ GYVPD KE L
Sbjct: 745 IEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLC 804
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSE+LA+AFGLL+TS G I V KNLR+C DCH A KFIS I REI +RD RFH F+
Sbjct: 805 GHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFR 864
Query: 668 DGRCSCGDYW 677
+G CSCGDYW
Sbjct: 865 NGTCSCGDYW 874
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 257/574 (44%), Gaps = 81/574 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VLK G +DL GK LHA K + N + +Y KCG + AA F
Sbjct: 88 FPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVF---- 143
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
D+I D VS+N++I+A + E A+ LF+
Sbjct: 144 ---------------------------DEITNRDDVSWNSMINAACRFEEWELAVHLFRL 176
Query: 122 MREKRFDTDGFTLSGLITASS---NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + FTL + A S N L L KQ+H + G D NN+L+T Y++ G
Sbjct: 177 MLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLG 235
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EAK +F ++ + KD VSWN+++ + Q+ EAL M+ + + TLAS+L
Sbjct: 236 RVYEAKTLF-DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVL 294
Query: 239 TAFTSLEDLVGGLQFHAH-LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
A + LE L G + HA L+ + +NS +G L+D+Y C + + VF+ + +
Sbjct: 295 PACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRL-VFDGMFRRT 353
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLGKQ-I 355
+ +WN MI+GY + E+ +A+ F ++ +G P+ + V+ AC L K+ I
Sbjct: 354 IAVWNAMIAGYV-RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGI 412
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H+ +K ++ V NAL+ MYS+ G +E AR +F M + VS N+MI GY G
Sbjct: 413 HSCVVKWGFEKDKY-VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGR 471
Query: 416 GMEALRLFEWMLE----------------TNIP--PTNITFVSVLSACAHTGKVAEGQKY 457
+AL L M N P P ++T ++VL CA + +G++
Sbjct: 472 HDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI 531
Query: 458 FS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLE 516
+ +K M + S ++D+ + G L + + E Q+
Sbjct: 532 HAYAVKQMLS--KDVAVGSALVDMYAKCGCLNLSRTVFE------------------QMS 571
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
N + + +L Y GK EE + R M + G
Sbjct: 572 VRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEG 605
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 193/388 (49%), Gaps = 10/388 (2%)
Query: 115 ALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+S + +M D F ++ TA +L L KQLH G +V NSL+
Sbjct: 69 AISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVN 128
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y + G +D A+RVF E+ +D+VSWNSM+ A + E A+ LF+ M+ +G +
Sbjct: 129 MYGKCGDIDAARRVFDEITN-RDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 233 TLASILTAFTSL-EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
TL S+ A ++L L+ G Q HA ++++G + + L+ +YAK G + + +F+
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKL-GRVYEAKTLFD 245
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
DLV WNT+IS SQ + + ++AL + + G P+ + V+ ACS+L
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRF-EEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLG 304
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
GK+IHA + V ALV MY C E R +FD M N+MIAGY
Sbjct: 305 CGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGY 364
Query: 411 AQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
++ EA+ LF E + E + P ++T SVL AC + + S + +GFE
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVK-WGFEK 423
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + ++D+ R G++ A + +M
Sbjct: 424 DKYVQNALMDMYSRMGRIEIARSIFGSM 451
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 133/245 (54%), Gaps = 6/245 (2%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
+A+ + MV+ + D + ++L A ++DL G Q HAH+ K G + + + L+
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
++Y KC GD+ +VF+EI D V WN+MI+ + EE+ + A+ F+ + P
Sbjct: 128 NMYGKC-GDIDAARRVFDEITNRDDVSWNSMINAACRFEEW-ELAVHLFRLMLLENVGPT 185
Query: 334 DCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
+ V V ACSNL L GKQ+HA ++ R NNALV MY+K G + +A+ L
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG--DWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
FD + + VS N++I+ +Q+ EAL ML++ + P +T SVL AC+H +
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEML 303
Query: 452 AEGQK 456
G++
Sbjct: 304 GCGKE 308
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 185/429 (43%), Gaps = 68/429 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +HA L N + + N F+ GC
Sbjct: 289 TLASVLPACSHLEMLGCGKEIHAFVLMN----NDLIENSFV------GC----------- 327
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
L+ Y + R +FD + + + +N +I+ Y A+ LF
Sbjct: 328 ---------ALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFV 378
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M E + TLS ++ A + + +H + GF+ V N+L+ YSR
Sbjct: 379 EMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRM 438
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQ-------------- 220
G ++ A+ +F M KD VSWN+M+ Y G+H + L L Q
Sbjct: 439 GRIEIARSIFGSMNR-KDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDY 497
Query: 221 -EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+ + L + TL ++L +L L G + HA+ +K ++ +GS L+D+YAKC
Sbjct: 498 EDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKC 557
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-----NRVGYHPDD 334
G + VFE++ +++ WN +I Y + ++AL F+++ N P++
Sbjct: 558 -GCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGK-GEEALKLFRRMVEEGDNNREIRPNE 615
Query: 335 CSFVCVISACSNLSPSLGKQIHAL-TIK----IEIRSNRISVNNALVAMYSKCGNLEDAR 389
+++ + ++ S+ S + + ++ T+K IE S+ + LV + + G +E+A
Sbjct: 616 VTYIAIFASLSH-SGMVDEGLNLFYTMKAKHGIEPTSDHYA---CLVDLLGRSGQIEEAY 671
Query: 390 RLFDRMPEH 398
L MP +
Sbjct: 672 NLIKTMPSN 680
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W + + +Q QA+ + + G PD+ +F V+ A + + +LGKQ+HA
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K ++ +V N+LV MY KCG+++ ARR+FD + + VS NSMI + A
Sbjct: 112 FKFG-QALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELA 170
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAH 447
+ LF ML N+ PT+ T VSV AC++
Sbjct: 171 VHLFRLMLLENVGPTSFTLVSVAHACSN 198
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/705 (34%), Positives = 371/705 (52%), Gaps = 67/705 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G D G+ +HA L+ + N + +Y+KCG
Sbjct: 199 TFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG------------ 246
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I +AR++FD + D +S+N +I+ + + + E+ L LF
Sbjct: 247 -------------------DIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFL 287
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E + T++ + AS + + K++H A+ GF + NSL+ Y+ G
Sbjct: 288 TMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLG 347
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A ++F M E KD +SW +M+ Y ++ +AL+++ M + D T+AS L
Sbjct: 348 RMGDAGKIFSRM-ETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASAL 406
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L L G++ H GF + + + L+++YAK S + ++VF+ + + D+
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK-SKHIDKAIEVFKFMAEKDV 465
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIH 356
V W++MI+G+ S +AL F+ + +G+ P+ +F+ +SAC+ GK+IH
Sbjct: 466 VSWSSMIAGFCFNHR-SFEALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEIH 522
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A ++ I S V NAL+ +Y KCG A F E + VS N M++G+ HG+G
Sbjct: 523 AYVLRCGIGSEGY-VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
AL LF M+E P +TFV++L AC+ G V +G + F MM + F P +HY+C
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYAC 641
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
M+DLL R GKLT+A LI MP P + + AA L+LEP++
Sbjct: 642 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPND 701
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+V+L ++Y +GKW +VA +R+ MR++G+++ G SW+EVK H F+ +D SHP I
Sbjct: 702 VAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQI 761
Query: 580 KEIHNYLEEMSRKMKQAGYVP-----DKEKR----LVHHSEKLAVAFGLLSTSYGEPILV 630
KEI+ L + +MK G+ P DKE L HSE+LAVAFGL++T+ G I V
Sbjct: 762 KEINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISV 821
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
KN C CH K IS I REITVRDT + HCFKDG CSCGD
Sbjct: 822 TKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 866
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 9/301 (2%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ N++L+ R G + A RVF +M E +D SWN MV YG+ EAL L+ M+
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPE-RDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ D+YT +L + D G + HAH+++ GF + + L+ +YAKC GD+
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKC-GDIVA 250
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
KVF+ + D + WN MI+G+ + E + L F + P+ + V A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHE-CEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVN--NALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
LS K++H +K R I V N+L+ MY+ G + DA ++F RM + +S
Sbjct: 310 MLSEVGFAKEMHGFAVK---RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMS 366
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
+MI+GY ++G +AL ++ M N+ P ++T S L+ACA G++ G K + +
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426
Query: 463 D 463
+
Sbjct: 427 N 427
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 18/241 (7%)
Query: 332 PDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
PD+ ++V + C E S + + NA+++M + G + A R+
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F +MPE + S N M+ GY + G EAL L+ ML + P TF VL C
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSIAL 506
G++ + + FGF E + + ++ + + G + A ++ + M IA
Sbjct: 214 RMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272
Query: 507 KAANH--------FLQLEPSNAVPYVM-LANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
NH FL + + P +M + ++ ASG EV + + G K GF
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM---HGFAVKRGF 329
Query: 558 S 558
+
Sbjct: 330 A 330
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 313/542 (57%), Gaps = 35/542 (6%)
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+N L+ Y R G L A++VF EM + K +WN+M+ Q E L LF+EM L
Sbjct: 26 SNILINGYVRAGDLVNARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 84
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
D YTL S+ + L + G Q H + IK G + + S L +Y + +G ++D
Sbjct: 85 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR-NGKLQDG 143
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
V +P +LV WNT+I G +Q + L +K + G P+ +FV V+S+CS+
Sbjct: 144 EIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 202
Query: 347 LS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L+ G+QIHA IKI S +V ++L++MYSKCG L DA + F + + V +S
Sbjct: 203 LAIRGQGQQIHAEAIKIGASSVV-AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 261
Query: 406 MIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
MI+ Y HG G EA+ LF M E TN+ + F+++L AC+H+G +G + F MM +
Sbjct: 262 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 321
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALK 507
+GF+P +HY+C++DLLGRAG L AE +I +MP +A +
Sbjct: 322 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 381
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
LQ++P+++ YV+LAN++A++ +W +V+ +R+ MRD+ V+K+ G SW E K ++H
Sbjct: 382 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 441
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
F D S KEI++YL+E++ +MK GY PD KE LV HSEKLAV
Sbjct: 442 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAV 501
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AF L+ G PI ++KNLR+C DCH A K+IS I REIT+RD RFH F +G+CSCGD
Sbjct: 502 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 561
Query: 676 YW 677
YW
Sbjct: 562 YW 563
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 205/427 (48%), Gaps = 11/427 (2%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
+YSK G +A + + + N S N+L+ Y R + +AR++FD++P L ++N +
Sbjct: 1 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF 160
I+ E LSLF++M F D +TL + + S+ ++ + +Q+H I G
Sbjct: 61 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 120
Query: 161 DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQ 220
+ VN+SL Y RNG L + + V M +++ V+WN++++ Q+ L L++
Sbjct: 121 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYK 179
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
M + T ++L++ + L G Q HA IK G + S LI +Y+KC
Sbjct: 180 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC- 238
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVC 339
G + D K F E D V+W++MIS Y + D+A+ F + + ++ +F+
Sbjct: 239 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ-GDEAIELFNTMAEQTNMEINEVAFLN 297
Query: 340 VISACSNLSPSLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP- 396
++ ACS+ S K + + +E + + + +V + + G L+ A + MP
Sbjct: 298 LLYACSH-SGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 356
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + V ++++ H A R+F+ +L+ + P + +V + + A + + +
Sbjct: 357 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID-PNDSACYVLLANVHASAKRWRDVSE 415
Query: 457 YFSMMKD 463
M+D
Sbjct: 416 VRKSMRD 422
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C G+ +HA +K + + I +YSKCGCL A AF++
Sbjct: 192 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 251
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-----DLVSYNTLISAYADCGDTESA 115
+ + ++ +++AY + A +LF+ + + + V++ L+ A + G +
Sbjct: 252 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 311
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF M EK GF G HY V + L
Sbjct: 312 LELFDMMVEKY----GFK------------------------PGLKHYTCVVDLL----G 339
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LD+A+ + M D V W +++ A H+ A ++F+E++ +
Sbjct: 340 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 389
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 359/656 (54%), Gaps = 49/656 (7%)
Query: 66 FSFNVLLAAYARQLRIASARQLF-DQIP-QPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F+FN LL+ YAR +A A++LF P + D+V++NT++S G + A+ DM
Sbjct: 52 FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 111
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSRNG 178
DG T + + A S L + +++H I D A+ V ++L+ Y+ +
Sbjct: 112 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK--DDELAANSFVASALVDMYATHE 169
Query: 179 FLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHREGLEALQLFQEMVSLQLGLD--MYTLA 235
+ +A++VF + + ++ WN+M+ Y Q EAL+LF M + + G T+A
Sbjct: 170 QVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA-EAGFVPCETTMA 228
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+L A E G H +++K G N + + L+D+YA+ G ++F +
Sbjct: 229 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL-GKTDVARRIFAMVDL 287
Query: 296 PDLVLWNTMISGYSQKEEYSD--QALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLG 352
PD+V WNT+I+G + +D Q ++L G P+ + + ++ C+ L+ P+ G
Sbjct: 288 PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARG 347
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K+IH ++ + ++ ++V +ALV MY+KCG L +R +FDR+P NT++ N +I Y
Sbjct: 348 KEIHGYAVRHALDTD-VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGM 406
Query: 413 HGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG+G EA LF+ M + P +TF++ L+AC+H+G V G + F M+ G EP
Sbjct: 407 HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 466
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP----------GSIALKAANHFLQLE----- 516
+ +C++D+LGRAG+L +A ++ +M G+ L H ++
Sbjct: 467 DILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLL 526
Query: 517 ---PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
P A YV+L NIY+A+G+W A +R MR RGV K+PG SWIEV +H F+A +
Sbjct: 527 ELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGE 586
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
+HP +E+H ++E + +M GY PD K L HSEKLA+AFGLL
Sbjct: 587 SAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLR 646
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ G I V KNLR+C DCH A KF+S + GREI +RD RFH F++G+CSCGDYW
Sbjct: 647 AAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 183/372 (49%), Gaps = 15/372 (4%)
Query: 138 ITASSNNLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK- 194
+ A++ + L ++ H A+ G H N+LL+ Y+R G + +A+R+F +
Sbjct: 23 LPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRG 82
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
D V+WN+MV Q EA+Q +MV+L + D T AS L A + LE L G + H
Sbjct: 83 DVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMH 142
Query: 255 AHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP--DLVLWNTMISGYSQK 311
A++IK NS + S L+D+YA + +VF+ +P L +WN MI GY+Q
Sbjct: 143 AYVIKDDELAANSFVASALVDMYATHE-QVGKARQVFDMVPDSGKQLGMWNAMICGYAQA 201
Query: 312 EEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLGKQ-IHALTIKIEIRSNRI 369
++AL F ++ G+ P + + V+ AC+ GK+ +H +K + NR
Sbjct: 202 -GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRF 260
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL---FEWM 426
V NAL+ MY++ G + ARR+F + + VS N++I G G +A +L + +
Sbjct: 261 -VQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQL 319
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
E + P IT +++L CA A G++ + + S ++D+ + G
Sbjct: 320 EEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDVAVGSALVDMYAKCGC 378
Query: 487 LTDAERLIEAMP 498
L + + + +P
Sbjct: 379 LALSRAVFDRLP 390
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALSLFK 120
AN F + L+ YA ++ ARQ+FD +P L +N +I YA G E AL LF
Sbjct: 153 ANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFA 212
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E F T++ ++ A + + + +H + G V N+L+ Y+R
Sbjct: 213 RMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL 272
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG---LDMYTL 234
G D A+R+F M ++ D VSWN+++ +A QL +EM L+ G + TL
Sbjct: 273 GKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 331
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L L G + H + ++ + +GS L+D+YAKC G + VF+ +P
Sbjct: 332 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC-GCLALSRAVFDRLP 390
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSN 346
+ + + WN +I Y +A F ++ G P++ +F+ ++ACS+
Sbjct: 391 RRNTITWNVLIMAYGM-HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 442
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 13/253 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F N L+ YAR + AR++F + PD+VS+NTLI+ G A L ++M+
Sbjct: 258 NRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ 317
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI-------KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ + G + + + C I K++H A+ D +V ++L+ Y++
Sbjct: 318 Q--LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAK 375
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLA 235
G L ++ VF + ++ ++WN +++AYG H G EA LF M S + + T
Sbjct: 376 CGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 434
Query: 236 SILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSG-DMRDCMKVFEEI 293
+ L A + + GLQ FHA G I + ++D+ + D M E
Sbjct: 435 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEA 494
Query: 294 PQPDLVLWNTMIS 306
+ + W+TM+
Sbjct: 495 GEQQVSAWSTMLG 507
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 46/220 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C GK +H +++ + + + + +Y+KCGCL+ + F++
Sbjct: 330 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 389
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
N ++NVL+ AY A LFD++ +P+ V++ ++A + G +
Sbjct: 390 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 449
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY- 174
L LF M DH +L C
Sbjct: 450 LQLFHAMER------------------------------------DHGVEPTPDILACVV 473
Query: 175 ---SRNGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHR 210
R G LDEA + M + +VS W++M+ A HR
Sbjct: 474 DILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHR 513
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/656 (33%), Positives = 358/656 (54%), Gaps = 60/656 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F ++L C R +HA +K+ ++ N I +Y KCGC+ A F++
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N+FS+N ++ A+ + + A +F+++PQ D S+N++IS + G + AL F
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M F + ++ ++A + +L L Q+H L + + ++L+ YS+ G
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A+ VF EM ++ VSWNS++ Y Q+ EAL++F EM+ + D TLAS+++
Sbjct: 202 VEYAQSVFDEM-TVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVS 260
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIP---- 294
A ++ + G Q HA ++K +N I G+ L+D+YAKC+ + + +F+ +P
Sbjct: 261 ACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCN-RINEARIIFDMMPIRSV 319
Query: 295 ---------------------------QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
D++ WN +I+G +Q E +++AL F+ L R
Sbjct: 320 VSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGE-NEEALILFRLLKR 378
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAMYSK 381
P +F +++AC+NL+ LG+Q H+ +K R + + V N+L+ MY K
Sbjct: 379 ESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMK 438
Query: 382 CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSV 441
CG++E+ R+F M E + VS N+MI GYAQ+G G +AL +F MLE+ P ++T + V
Sbjct: 439 CGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGV 498
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
L AC+H G + EG+ YF M G P +HY+CM+DLLGRAG L +A+ LIE M P
Sbjct: 499 LCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQP 558
Query: 502 GSI---ALKAA--------------NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
+I +L AA L+++P N+ PYV+L+N+YA + W+ V +R+
Sbjct: 559 DAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRK 618
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
LMR RGV K+PG SWIE++ +++VF+ +D H KEI+ L + ++MKQAGYVP
Sbjct: 619 LMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP 674
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 154/318 (48%), Gaps = 13/318 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T V+ C + G+ +HA +K + L N + +Y+KC ++ A F+
Sbjct: 254 TLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDM 313
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S +++ YA+ ++ AR +F + D++++N LI+ G+ E AL LF
Sbjct: 314 MPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 373
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGF------DHYASVNNSLL 171
+ ++ + +T L+ A +N +L L +Q H + GF D V NSL+
Sbjct: 374 RLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLI 433
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
Y + G ++ RVF M E KD VSWN+M+V Y Q+ G +AL++F +M+ D
Sbjct: 434 DMYMKCGSVENGCRVFQHMLE-KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDH 492
Query: 232 YTLASILTAFTSLEDL-VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T+ +L A + L G F + + G + ++DL + +G + + +
Sbjct: 493 VTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR-AGYLEEAKNLI 551
Query: 291 EEIP-QPDLVLWNTMISG 307
EE+ QPD ++W ++++
Sbjct: 552 EEMSMQPDAIVWGSLLAA 569
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 333 DDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D F +++ C+ + S ++HA IK S + N L+ +Y KCG ++ AR+L
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETF-IQNRLIDVYGKCGCVDVARKL 76
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
FDRM E N S NS+I + + G +A+ +FE M + + ++ S++S G+
Sbjct: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVD----QCSWNSMISGFEQHGRF 132
Query: 452 AEGQKYFSMM 461
E YF+ M
Sbjct: 133 DEALVYFAQM 142
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/708 (35%), Positives = 359/708 (50%), Gaps = 71/708 (10%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C +L GK +H L L + L+N I +YSKCG
Sbjct: 74 LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG----------------- 116
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
++ AR LFD + D VS+N+LI+ Y G E L++ + M +
Sbjct: 117 --------------QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQN 162
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQ----LHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ +TL + A S+N K LH AI G V +LL Y++ G LD
Sbjct: 163 GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLD 222
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----GLEALQLFQEMVSLQLGLDMYTLAS 236
+A ++F +M + K+ V +N+M+ Q +AL LF EM S + M+T +S
Sbjct: 223 DAIQIFDQMVD-KNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSS 281
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A +ED Q HA + K+G + +IGS LIDLY+ G M D + F I
Sbjct: 282 LLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYS-VLGSMMDALLCFNSIHNL 340
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+V MI GY Q E+ + AL F +L PD+ F ++S+C+N+ G+QI
Sbjct: 341 TIVPMTAMIFGYLQNGEF-ESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQI 399
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
K+ I I N+ + MY+K G+L A F +M + VS ++MI AQHG
Sbjct: 400 QGHATKVGISRFTI-FQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGH 458
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
MEALR FE M I P + F+ VL AC+H G V EG +YF M+ + + +H
Sbjct: 459 AMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCV 518
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPS 518
C++DLLGRAG+L DAE LI + F + A + A ++LEP
Sbjct: 519 CVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPL 578
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ YV+L NIY +G + +R LM +R ++K+PG SWI++ +++ FV+ D SH
Sbjct: 579 ASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKN 638
Query: 579 IKEIHNYLEEM---SRKMKQA----GYVPDKE--KRLVHHSEKLAVAFGLLSTSYGEPIL 629
+I+ L+EM ++++ A GY + E + +HSEKLAVAFG+L S P+
Sbjct: 639 SGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVR 698
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
VMKNLRIC DCH +K S + RE+ VRD+ RFH FKDG CSCGDYW
Sbjct: 699 VMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 746
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 203/385 (52%), Gaps = 16/385 (4%)
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA-- 140
SA +LFD++ + ++V+YN+LIS Y + + + LF R D + +G +TA
Sbjct: 19 SADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACS 78
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
S NL K +H L + G + NSL+ YS+ G +D A R+ ++ + D VSWN
Sbjct: 79 QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYA-RILFDHSDKLDGVSWN 137
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG----GLQFHAH 256
S++ Y Q+ + E L + Q+M L + YTL S L A +S + G G H H
Sbjct: 138 SLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSS--NFNGCKMFGTMLHDH 195
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
IK G H + +G+ L+D+YAK +G + D +++F+++ ++V++N M++G Q+E D
Sbjct: 196 AIKLGLHLDVVVGTALLDMYAK-TGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIED 254
Query: 317 ----QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+AL F ++ G P ++ ++ AC + KQ+HAL K + S+ +
Sbjct: 255 KCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEY-I 313
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+ L+ +YS G++ DA F+ + V + +MI GY Q+G AL LF +L
Sbjct: 314 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEE 373
Query: 432 PPTNITFVSVLSACAHTGKVAEGQK 456
P F +++S+CA+ G + G++
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQ 398
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 15/317 (4%)
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A ++F +M + + V++NS++ Y Q + + LF + L L LD Y A LTA +
Sbjct: 20 ADKLFDKMSK-SNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACS 78
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+L G H ++ G + + LID+Y+KC G + +F+ + D V WN
Sbjct: 79 QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKC-GQVDYARILFDHSDKLDGVSWN 137
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS---NLSPSLGKQIHALT 359
++I+GY Q +Y ++ L +K+++ G + + + ACS N G +H
Sbjct: 138 SLIAGYVQNGKY-EELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 196
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI---- 415
IK+ + + + V AL+ MY+K G+L+DA ++FD+M + N V N+M+AG Q
Sbjct: 197 IKLGLHLD-VVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 255
Query: 416 -GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM-KDMFGFEPEGEH 473
+AL LF M I P+ T+ S+L AC ++ ++M K+ G +
Sbjct: 256 CAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN--GLLSDEYI 313
Query: 474 YSCMIDLLGRAGKLTDA 490
S +IDL G + DA
Sbjct: 314 GSILIDLYSVLGSMMDA 330
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 15/227 (6%)
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
KC GD R K+F+++ + ++V +N++ISGY Q D+ + F K R+G D +
Sbjct: 13 KC-GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNL-DKVMILFDKARRLGLKLDKYNC 70
Query: 338 VCVISACS---NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
++ACS NLS GK IH L + + S ++ + N+L+ MYSKCG ++ AR LFD
Sbjct: 71 AGALTACSQSGNLSA--GKMIHGLILVYGLGS-QVVLTNSLIDMYSKCGQVDYARILFDH 127
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ + VS NS+IAGY Q+G E L + + M + + T S L AC+ G
Sbjct: 128 SDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN---FNG 184
Query: 455 QKYF-SMMKD---MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
K F +M+ D G + + ++D+ + G L DA ++ + M
Sbjct: 185 CKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM 231
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 38/244 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C+ D K +HAL KN + Y+ + I LYS G + A FN
Sbjct: 278 TYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI 337
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ + ++ Y + SA LF ++ +PD ++T++S+ A+ G S
Sbjct: 338 HNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSG- 396
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+Q+ A G + NS + Y++
Sbjct: 397 --------------------------------EQIQGHATKVGISRFTIFQNSQIWMYAK 424
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G L A F +M E D VSW++M+ + QH +EAL+ F+ M S + + +
Sbjct: 425 SGDLYAANLTFQQM-ENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLG 483
Query: 237 ILTA 240
+L A
Sbjct: 484 VLIA 487
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 247/741 (33%), Positives = 364/741 (49%), Gaps = 101/741 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C G +H +K + ++ N I Y++CG + H F
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV S+ L+ YAR R A LF ++ + P V+ +ISA A D
Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDL---- 248
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
DM E+ + A L G + N+L+ Y +
Sbjct: 249 ----DMGER------------VCAYIGEL-------------GLKLNKVMVNALVDMYMK 279
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D AKR+F E + ++ V +N+++ Y + EAL + EM+ D T+ S
Sbjct: 280 CGAIDAAKRLFDECVD-RNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLS 338
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC----------------- 279
++A L DL G H ++I++G IG+ +ID+Y KC
Sbjct: 339 AISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKT 398
Query: 280 -------------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+GD+ +VF +IP+ + V WNTMISG QK + D A+ F+++
Sbjct: 399 VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFED-AIELFREMQ 457
Query: 327 RVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G D + + + SAC L +P L K +H K I + + +N ALV M+++CG+
Sbjct: 458 GEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD-MRLNTALVDMFARCGDP 516
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+ A ++F++M E + + + I A G G A LF ML + P + FV VL+AC
Sbjct: 517 QSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTAC 576
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI- 504
+H G+V +G FS+M+D G P+ EHY CM+DLLGRAG L +A LI++MP P +
Sbjct: 577 SHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVV 635
Query: 505 ----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
A AA +L P A +V+L+NIYA++GKW +VA +R +R+
Sbjct: 636 WGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLRE 695
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
+GV+K PG S ++V +H F + D SHP + I L+EM+ + AG++PD
Sbjct: 696 KGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLD 755
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KE L HSEKLA+AFGL++T PI V+KNLR+C DCH+ K S I REI
Sbjct: 756 VDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREII 815
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F+ G CSC DYW
Sbjct: 816 VRDNNRFHFFRQGLCSCCDYW 836
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 187/363 (51%), Gaps = 22/363 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF---LDEAKRVFYEMGE-IKDEVSW---N 200
+KQLHC G D S L+ + LD A++ F E ++ + + N
Sbjct: 41 LKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLN 100
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
S++ Y G EA+ L+ M+ L + + YT +L+ T + G+Q H ++K
Sbjct: 101 SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G ++ I + LI YA+C G M KVFE + + ++V W ++I GY++ + +A+
Sbjct: 161 GLEEDVFIQNCLIHFYAEC-GHMDHGHKVFEGMSERNVVSWTSLICGYARGDR-PKEAVS 218
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ G P + VCVISAC+ L +G+++ A ++ ++ N++ V NALV MY
Sbjct: 219 LFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV-NALVDMY 277
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
KCG ++ A+RLFD + N V N++++ YA+ G+ EAL + + ML+ P +T +
Sbjct: 278 MKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTML 337
Query: 440 SVLSACAHT-----GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
S +SA A GKV G + + + G++ G + +ID+ + GK A R+
Sbjct: 338 SAISASAQLVDLFYGKVCHG---YVIRNGLEGWDSIG---NVIIDMYMKCGKPEMACRVF 391
Query: 495 EAM 497
+ M
Sbjct: 392 DLM 394
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/615 (36%), Positives = 341/615 (55%), Gaps = 44/615 (7%)
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI----KQLHCLAIYC 158
++A++ G AL F+ M + D T S ++ A + +++H A
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
G V ++++ Y + G LD+A+ F E+ + K+ V+WN+M+ Y EAL+L
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEEL-QWKNSVTWNAMMTNYKLDGRDREALEL 119
Query: 219 FQEMV--SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLID 274
F+EM S D ++ + + A ++LEDL G + H L + G H++ +G+ L++
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179
Query: 275 LYAKCSGDMRDCMKVFEEIPQ-PDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHP 332
+Y+KC GD+ + KVF+ I D V WN MI+ Y+Q QAL ++ + + P
Sbjct: 180 MYSKC-GDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGR-GKQALDLYRSMHDTTDLAP 237
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
+FV VI C+ LS G+ IHA +N + V+NALV MY KCG L++A +
Sbjct: 238 KQGTFVTVIDVCAELSALKQGRAIHARVRATNFDAN-LLVSNALVHMYGKCGCLDEALDV 296
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F M + +S N++I+ YA HG +AL L++ M + PT +TFV +LSAC+H G V
Sbjct: 297 FHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLV 356
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------- 504
A+G YF M+D +P H+ C+IDLLGR G+L +AE ++++MP ++
Sbjct: 357 ADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLG 416
Query: 505 ----------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
++AA+ + P + YV+L+NIYAA+G+W++V IR++M RGV+K
Sbjct: 417 ACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKS 476
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEK---------- 604
PG SWIE+ +H FV+ D SHP +EI+ L +M +MK GYVPD
Sbjct: 477 PGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEK 536
Query: 605 --RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
LV HSEKLA+ +G + + ++KNLR+C DCH A KF+S I GR+I VRD R
Sbjct: 537 EDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAAR 596
Query: 663 FHCFKDGRCSCGDYW 677
FH F++G CSC DYW
Sbjct: 597 FHLFENGSCSCRDYW 611
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 206/455 (45%), Gaps = 47/455 (10%)
Query: 18 GKSLHAL-YLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
G+ +H + L+P + + I +Y KCG L A AF + Q N ++N ++ Y
Sbjct: 50 GREIHRYARISGLLP-NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK 108
Query: 77 RQLRIASARQLFDQI------PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
R A +LF ++ +PD S++ I A ++ D E + + +R +
Sbjct: 109 LDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREG---- 164
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
K+LH + V +LL YS+ G L+EA++VF +
Sbjct: 165 ------------------KELHKDVV---------VGTALLNMYSKCGDLEEARKVFDSI 197
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVG 249
D V WN+M+ AY QH G +AL L++ M + L T +++ L L
Sbjct: 198 RHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQ 257
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G HA + + F N + + L+ +Y KC G + + + VF + D + WNT+IS Y+
Sbjct: 258 GRAIHARVRATNFDANLLVSNALVHMYGKC-GCLDEALDVFHSMKLKDEISWNTIISSYA 316
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSN 367
+SDQAL +++++ G P + +FV ++SACS+ L + + I+ +
Sbjct: 317 Y-HGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPS 375
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ ++ + + G L +A + MP + N V S++ HG +R + +
Sbjct: 376 -VPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV 434
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
++ +P T+ +V + + A G+ + +K +M
Sbjct: 435 VD-RVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIM 468
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 55/230 (23%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ C L G+++HA + +SN + +Y KCGCL A F+
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+L D+I S+NT+IS+YA G ++ AL L++
Sbjct: 301 -------------------------KLKDEI------SWNTIISSYAYHGHSDQALLLYQ 329
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS----------- 169
+M + T GL++A S H + G D++ + +
Sbjct: 330 EMDLQGVKPTEVTFVGLLSACS---------HGGLVADGLDYFYRMQDDHRIKPSVPHFG 380
Query: 170 -LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEA 215
++ R G L EA+ V M + V W S++ A +G + G+ A
Sbjct: 381 CIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRA 430
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/696 (32%), Positives = 372/696 (53%), Gaps = 49/696 (7%)
Query: 22 HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH---------ANVFSFNVLL 72
H +++ P + Y++ L CG SA H + + H +NV N LL
Sbjct: 439 HFFWMRRTHPKTDYIT--ISALLPACG--SAQHLKWGRGLHGLITKSGLESNVCVCNSLL 494
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
+ YA+ A +F +P DL+S+N++++++ + G A+ L +M + R +
Sbjct: 495 SMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYV 554
Query: 133 TLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE 192
T + ++A N L +K +H I+ H + N+L+T Y + G +DEA++V M E
Sbjct: 555 TFTTALSACYN-LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPE 613
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG-GL 251
+D V+WN+++ + ++ +Q F M L + T+ ++L S + L+ G+
Sbjct: 614 -RDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGM 672
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HAH++ +GF ++++ S LI +YA+C GD+ +F+ + + WN + S +
Sbjct: 673 PIHAHIVVAGFELDTYVQSSLITMYAQC-GDLNTSSYIFDVLANKNSSTWNAIFSANAHY 731
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
++AL ++ G D SF ++ NL+ G+Q+H+ IK+ +
Sbjct: 732 GP-GEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEY- 789
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V NA + MY KCG ++D R+ + S N +I+ A+HG +A F ML+
Sbjct: 790 VLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLG 849
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P ++TFVS+LSAC+H G V EG YFS M FG EH C+IDLLGR+G+L +A
Sbjct: 850 LKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEA 909
Query: 491 ERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAAS 533
E I+ MP P G++ L KAA+ +L S+ YV+ +N+ A++
Sbjct: 910 EGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCAST 969
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
+W +V +R+ M + ++KKP SWI++K ++ F D HP +I+ LEE+ +
Sbjct: 970 QRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMT 1029
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
++ G++PD KE L +HSE++A+AFGL++++ G P+ + KNLR+CGDCH
Sbjct: 1030 REEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCH 1089
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ K +S I GR+I VRD+YRFH F G+CSC DYW
Sbjct: 1090 SVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 213/444 (47%), Gaps = 21/444 (4%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NVF LL Y ++ A +LF++I +P++VS+ +L+ YAD G T+ L++++ +
Sbjct: 282 SNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL 341
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYA-SVNNSLLTCYSRNGF 179
R G T++ +I + + Q+ I G D + SV NSL++ +
Sbjct: 342 RHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDS 401
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++EA RVF M E +D +SWNS++ A + E+L F M D T++++L
Sbjct: 402 VEEASRVFNNMQE-RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLP 460
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A S + L G H + KSG N + + L+ +YA+ +G D VF +P DL+
Sbjct: 461 ACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQ-AGSSEDAELVFHTMPARDLI 519
Query: 300 LWNTMISGYSQKEEYSD------QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
WN+M++ + + +YS + L K +N V +F +SAC NL K
Sbjct: 520 SWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYV-------TFTTALSACYNLEKL--K 570
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+HA I + N I + N LV MY K G +++A+++ MPE + V+ N++I G+A
Sbjct: 571 IVHAFVIHFAVHHNLI-IGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADD 629
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
++ F M + IT V++L C + + + GFE +
Sbjct: 630 KDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYV 689
Query: 474 YSCMIDLLGRAGKLTDAERLIEAM 497
S +I + + G L + + + +
Sbjct: 690 QSSLITMYAQCGDLNTSSYIFDVL 713
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 223/487 (45%), Gaps = 44/487 (9%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
GK+LHAL +K+++ + + +N + +YSK G + A H F
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVF------------------- 205
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
D++ + S+N +IS + G A+ F M E + ++
Sbjct: 206 ------------DKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIAS 253
Query: 137 LITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
++TA + C+ +Q+H + CG V SLL Y +G + EA ++F E+ E
Sbjct: 254 MVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEE- 312
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+ VSW S++V Y + E L +++ + L T+A+++ D G Q
Sbjct: 313 PNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQI 372
Query: 254 HAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
+IKSG +S + + LI ++ + + +VF + + D + WN++I+ +
Sbjct: 373 LGDVIKSGLDTSSVSVANSLISMFGNYD-SVEEASRVFNNMQERDTISWNSIITASAHNG 431
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+ +++LG F + R D + ++ AC + G+ +H L K + SN + V
Sbjct: 432 RF-EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESN-VCV 489
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
N+L++MY++ G+ EDA +F MP + +S NSM+A + + G A+ L ML+T
Sbjct: 490 CNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRK 549
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+TF + LSAC + K+ K F + ++ + G+ G + +A+
Sbjct: 550 AMNYVTFTTALSACYNLEKL----KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQ 605
Query: 492 RLIEAMP 498
++ + MP
Sbjct: 606 KVCKIMP 612
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
++GK +HAL +K I+ N N LV MYSK G+++ A+ +FD+M + N S N+MI+G
Sbjct: 164 NVGKALHALCVKDVIQQNTF-YTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISG 222
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+ + G +A++ F M E + P++ S+++AC +G + EG + G
Sbjct: 223 FVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMS 282
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANI 529
+ ++ G G +++A +L E ++E N V + L
Sbjct: 283 NVFVGTSLLHFYGTHGSVSEANKLFE------------------EIEEPNIVSWTSLMVC 324
Query: 530 YAASGKWEEVATIRRLMRDRGV 551
YA +G +EV I R +R G+
Sbjct: 325 YADNGHTKEVLNIYRHLRHNGL 346
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 11/263 (4%)
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
F+ + + G HA +K QN+ + L+++Y+K G ++ VF+++ +
Sbjct: 156 GFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKF-GSIKYAQHVFDKMYDRNDA 214
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHA 357
WN MISG+ + Y +A+ F + G P +++AC S +QIH
Sbjct: 215 SWNNMISGFVRVGWY-HKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHG 273
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + SN + V +L+ Y G++ +A +LF+ + E N VS S++ YA +G
Sbjct: 274 YVVKCGLMSN-VFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTK 332
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC- 476
E L ++ + + T T +V+ C G G + ++ D+ + S
Sbjct: 333 EVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMG---YQILGDVIKSGLDTSSVSVA 389
Query: 477 --MIDLLGRAGKLTDAERLIEAM 497
+I + G + +A R+ M
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNM 412
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/763 (30%), Positives = 372/763 (48%), Gaps = 126/763 (16%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
LKTC D+ G +H +K YL + Y +C L A+
Sbjct: 681 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN----------- 729
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
Q+F ++P P+ + +N I + + LF+ M+
Sbjct: 730 --------------------QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS 769
Query: 126 RFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ T+ ++ A L KQ+H G D S+ N L++ YS+NG L+ A
Sbjct: 770 FLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELA 829
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT---------- 233
+RVF M E ++ SWNSM+ +Y +A LF E+ S + D+ T
Sbjct: 830 RRVFDSM-ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFL 888
Query: 234 -------------------------LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ S+L A + L L G + H +++++GF + ++
Sbjct: 889 HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV 948
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ LID+Y K + + VF+ + ++ WN+++SGYS K + D AL ++ +
Sbjct: 949 GTSLIDMYVK-NHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED-ALRLLNQMEKE 1006
Query: 329 GYHPD------------------------DCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
G PD S C++ AC++LS GK+IH L+I+
Sbjct: 1007 GIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 1066
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + V AL+ MYSK +L++A ++F R+ S N MI G+A G+G EA+ +F
Sbjct: 1067 FIED-VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVF 1125
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M + + P ITF ++LSAC ++G + EG KYF M + P EHY CM+DLLGR
Sbjct: 1126 NEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 1185
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
AG L +A LI MP P + A AA + +LEP+N+ Y+++
Sbjct: 1186 AGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILM 1245
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
N+Y+ +WE++ +R LM GV+ + +SWI++ +++HVF +++ HP +I+ L
Sbjct: 1246 MNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFEL 1305
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNL 634
++ +MK+ GYVPD K+K L+ H+EKLA+ +GL+ GEPI V+KN
Sbjct: 1306 YQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNT 1365
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
RIC DCH+A K+IS + RE+ +RD RFH F++G+CSC D+W
Sbjct: 1366 RICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE-ALQLFQEMVSLQL 227
+L++ Y G A VFY +G ++ + WNS V + L L++F+E+ +
Sbjct: 612 NLISSYLGFGDFWSAAMVFY-VGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 670
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D + L T + D+ G++ H LIK GF + ++ L++ Y +C G +
Sbjct: 671 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG-LEKAN 729
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF E+P P+ +LWN I Q E+ + + F+K+ + + V V+ AC +
Sbjct: 730 QVFHEMPNPEALLWNEAIILNLQSEKLQ-KGVELFRKMQFSFLKAETATIVRVLQACGKM 788
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ KQIH + + S+ +S+ N L++MYSK G LE ARR+FD M NT S NSM
Sbjct: 789 GALNAAKQIHGYVFRFGLDSD-VSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 847
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ YA G +A LF + +++ P +T+ +LS G E M+ G
Sbjct: 848 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-G 906
Query: 467 FEPEGEHYSCMIDLLGRAGKLT 488
F+P + ++ + G L
Sbjct: 907 FKPNSSSMTSVLQAISELGFLN 928
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 179/391 (45%), Gaps = 41/391 (10%)
Query: 97 VSYNTLISAY-ADCGDTESALSLFKDMREKR--FDTDGFTLSGLITASSNNLCLIKQLHC 153
+ +N+ + + + G L +FK++ K FD++ ++++ ++ L ++H
Sbjct: 639 LKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHG 698
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
I GFD + +L+ Y R L++A +VF+EM + + WN ++ Q +
Sbjct: 699 CLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN-PEALLWNEAIILNLQSEKLQ 757
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
+ ++LF++M L + T+ +L A + L Q H ++ + G + + + LI
Sbjct: 758 KGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLI 817
Query: 274 DLYAKCS------------------------------GDMRDCMKVFEEIP----QPDLV 299
+Y+K G + D +F E+ +PD+V
Sbjct: 818 SMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIV 877
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
WN ++SG+ Y ++ L +++ G+ P+ S V+ A S L ++GK+ H
Sbjct: 878 TWNCLLSGHFL-HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY 936
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ + + V +L+ MY K +L A+ +FD M N + NS+++GY+ G+ +
Sbjct: 937 VLRNGFDCD-VYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 995
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
ALRL M + I P +T+ ++S A G
Sbjct: 996 ALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/615 (37%), Positives = 347/615 (56%), Gaps = 39/615 (6%)
Query: 20 SLHALYL--------KNLVPFSAYLSNHFI----LLYSKCGCLSAAHHAFNQTQHANVFS 67
SLH ++L K +VP + L+ F L S+ G + A H +VF+
Sbjct: 95 SLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSH-DVFA 153
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR--EK 125
+ LL Y + + AR LFD++P+ + VS+ T+IS YA + A LFK MR EK
Sbjct: 154 ASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEK 213
Query: 126 RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ + F + +++A + + + +Q+H LA+ G SV N+L+T Y + G L++A
Sbjct: 214 GKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDA 273
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
+ F E+ K+ ++W++MV + Q + +AL+LF +M +TL ++ A +
Sbjct: 274 LKTF-ELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSD 332
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+V G Q H + +K G+ ++ S L+D+YAKC G + D K FE I QPD+VLW +
Sbjct: 333 ACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKC-GSIVDARKGFECIQQPDVVLWTS 391
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
+I+GY Q +Y + AL + K+ G P+D + V+ ACSNL+ GKQ+HA IK
Sbjct: 392 IITGYVQNGDY-EGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKY 450
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S I + +AL AMY+KCG+L+D R+F RMP + +S N+MI+G +Q+G G E L L
Sbjct: 451 NF-SLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLEL 509
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
FE M P N+TFV++LSAC+H G V G YF MM D F P EHY+CM+D+L
Sbjct: 510 FEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILS 569
Query: 483 RAGKLTDAERLIEAMPFNPG----SIALKAA-NH------------FLQLEPSNAVPYVM 525
RAGKL +A+ IE+ + G I L A+ NH ++L + YV+
Sbjct: 570 RAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVL 629
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L++IY A GKWE+V +R +M+ RGV K+PG SWIE+K HVFV D HP I EI
Sbjct: 630 LSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLG 689
Query: 586 LEEMSRKMKQAGYVP 600
L+ +++ MK GY P
Sbjct: 690 LKLLTKLMKDEGYQP 704
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 251/507 (49%), Gaps = 47/507 (9%)
Query: 4 QVLKT---CVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
QVL+ C + L G++LHA L S ++N I LY+KC S A+ F+
Sbjct: 12 QVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSI 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+N L+ A+++Q Q P L + LF+
Sbjct: 72 NNKDVVSWNCLINAFSQQ-----------QAHAPSL-----------------HVMHLFR 103
Query: 121 D--MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M K + TL+G+ TA+S ++ +Q H LA+ H +SLL Y +
Sbjct: 104 QLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCK 163
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTL 234
G + EA+ +F EM E ++ VSW +M+ Y EA +LF+ M + G + +
Sbjct: 164 TGLVFEARDLFDEMPE-RNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVF 222
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L+A T + G Q H+ +K+G + + L+ +Y KC G + D +K FE
Sbjct: 223 TSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKC-GSLEDALKTFELSG 281
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GK 353
+ + W+ M++G++Q + SD+AL F +++ G P + + V VI+ACS+ + G+
Sbjct: 282 NKNSITWSAMVTGFAQFGD-SDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGR 340
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q+H ++K+ ++ V +ALV MY+KCG++ DAR+ F+ + + + V S+I GY Q+
Sbjct: 341 QMHGYSLKLGYEL-QLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQN 399
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFE-PEG 471
G AL L+ M + P ++T SVL AC++ + +G Q + ++K F E P G
Sbjct: 400 GDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIG 459
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMP 498
S M + G L D R+ MP
Sbjct: 460 SALSAM---YAKCGSLDDGYRIFWRMP 483
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 42/255 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C L GK +HA +K + + +Y+KCG L + F +
Sbjct: 423 TMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRM 482
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +++ ++ R +LF+++ +PD V++ L+SA + G +
Sbjct: 483 PARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGW 542
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M D F ++ + +HYA + + L SR
Sbjct: 543 VYFKMM------FDEFNIAPTV----------------------EHYACMVDIL----SR 570
Query: 177 NGFLDEAKRVFYEMGEIKDEVS-WNSMVVAYGQHRE---GLEALQLFQEMVSLQLGLDMY 232
G L EAK F E + + W ++ A HR+ G A + E+ SL+
Sbjct: 571 AGKLHEAKE-FIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSA-YV 628
Query: 233 TLASILTAFTSLEDL 247
L+SI TA ED+
Sbjct: 629 LLSSIYTALGKWEDV 643
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/642 (33%), Positives = 358/642 (55%), Gaps = 38/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL YAR + SA ++F +I D +S+N+++S Y A+ F +M + F+
Sbjct: 303 NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D + L++A + LI +++H A+ D + N+L+ Y + ++ + RV
Sbjct: 363 PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARV 422
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M IKD VSW +++ Y Q EA+ F+ + +D + SIL A + L+
Sbjct: 423 FDRM-RIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKS 481
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ Q H++ I++G + + + +ID+Y +C G++ + +FE + + D+V W +M++
Sbjct: 482 ISLLKQVHSYAIRNGL-LDLILKNRIIDIYGEC-GEVCYALNIFEMLDKKDIVTWTSMVN 539
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
+++ +A+ F K+ G PD + V ++ A + LS + GK+IH I+ +
Sbjct: 540 CFAENG-LLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFP 598
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+V ++LV MYS CG++ A ++FD + V +MI HG G +A+ +F+
Sbjct: 599 VEG-AVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKR 657
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
MLET + P +++F+++L AC+H+ V EG+ Y MM + +P EHY+C++DLLGR+G
Sbjct: 658 MLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSG 717
Query: 486 KLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLAN 528
+ +A + I++MP P S+ A+ A + L+LEP N YV+++N
Sbjct: 718 QTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSN 777
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
++A GKW V IR M ++G++K P SWIE+ +H F A D SH + IH L E
Sbjct: 778 VFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAE 837
Query: 589 MSRKMKQAG-YVPD----------KEK-RLVH-HSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ K+++ G YV D +EK L+H HSE+LA++FGL+ST+ G P+ + KNLR
Sbjct: 838 ITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLR 897
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH K +S + REI VRD RFH F G CSCGD+W
Sbjct: 898 VCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 242/499 (48%), Gaps = 42/499 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C D G +H L +K+ + S ++N + +Y+KCG L +A F
Sbjct: 165 TLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFE-- 222
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ R R D+ S+N+ IS G AL LF+
Sbjct: 223 --------------WMRDGR--------------DVASWNSAISGCVQNGMFLEALDLFR 254
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ F + +T G+ + A L ++LH + CG + N+LL Y+R G
Sbjct: 255 RMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCG 313
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++D A RVF E+G+ KD +SWNSM+ Y Q+R EA+ F EMV D + S+L
Sbjct: 314 WVDSALRVFREIGD-KDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLL 372
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L+ G + HA+ +K + I + L+D+Y KC + +VF+ + D
Sbjct: 373 SAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCY-SVECSARVFDRMRIKDH 431
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V W T+I+ Y+Q YS +A+G F+ + G D ++ ACS L S SL KQ+H+
Sbjct: 432 VSWTTIIACYAQSSRYS-EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHS 490
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I+ + + + N ++ +Y +CG + A +F+ + + + V+ SM+ +A++G+
Sbjct: 491 YAIRNGLLD--LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLH 548
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG-FEPEGEHYSC 476
EA+ LF ML I P ++ V +L A A + +G++ + + G F EG S
Sbjct: 549 EAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFL--IRGKFPVEGAVVSS 606
Query: 477 MIDLLGRAGKLTDAERLIE 495
++D+ G + A ++ +
Sbjct: 607 LVDMYSGCGSMNYALKVFD 625
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 257/538 (47%), Gaps = 45/538 (8%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR---- 126
LL Y + R+ A +LFD +P + S+N LI A G A+ +++ MR
Sbjct: 99 LLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAG 158
Query: 127 FDTDGFTLSGLITA---SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
DG TL+ ++ A + C ++H LA+ G D V N+L+ Y++ G LD A
Sbjct: 159 AAPDGCTLASVLKACGAEGDGRC-GSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSA 217
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
RVF M + +D SWNS + Q+ LEAL LF+ M S ++ YT +L
Sbjct: 218 LRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAE 277
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L L G + HA L+K G N + L+ +YA+C G + ++VF EI D + WN+
Sbjct: 278 LAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARC-GWVDSALRVFREIGDKDYISWNS 335
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKI 362
M+S Y Q Y+ +A+ F ++ + G++PD V ++SA +L + G+++HA +K
Sbjct: 336 MLSCYVQNRLYA-EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQ 394
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ S+ + + N L+ MY KC ++E + R+FDRM + VS ++IA YAQ EA+
Sbjct: 395 RLDSD-LQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGK 453
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F + I + S+L AC+ G K S++K + + + ++DL+
Sbjct: 454 FRTAQKEGIKVDPMMMGSILEACS-------GLKSISLLKQVHSYAIR----NGLLDLIL 502
Query: 483 RAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
+ R+I+ + A N F L+ + V + + N +A +G E +
Sbjct: 503 K-------NRIIDI--YGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVAL 553
Query: 543 RRLMRDRGVQKK-----------PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEM 589
M + G+Q G S + K++H F+ G P+ + + L +M
Sbjct: 554 FGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR-GKFPVEGAVVSSLVDM 610
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/542 (38%), Positives = 308/542 (56%), Gaps = 44/542 (8%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+LL+C+ G +D A RVF M ++D SWN+MV ++ EA +F+ M +
Sbjct: 76 NTLLSCHFACGDIDGAWRVFSTM-PVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARN- 133
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDC 286
A A + G + +L ++ + I + ++ Y +G+++
Sbjct: 134 -------AVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMD-TGNVQKA 185
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACS 345
M+ F +P +LV WN +++GY + D AL FK + P+ + V+ CS
Sbjct: 186 MEYFRAMPVRNLVSWNAVVAGYVKNSRAGD-ALRVFKTMVEDAIVQPNPSTLSSVLLGCS 244
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
NLS G+Q+H +K+ + I+V +L++MY KCG+L+DA +LFD M + V+ N
Sbjct: 245 NLSALGFGRQVHQWCMKLPL-GRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWN 303
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI+GYAQHG G +A++LFE M + + P IT ++VL+AC HTG G + F M++
Sbjct: 304 AMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEA 363
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI------------ALK 507
+ EP+ +HYSCM+DLL RAG L A +I +MPF P G++ A
Sbjct: 364 YNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEF 423
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA ++ +P NA YV LANIYA + +W++V+ +RR M+D V K PG+SW+E+K H
Sbjct: 424 AARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRH 483
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
F + D HP + IH+ L+ + + MK GY PD K + L+ HSEKLA+
Sbjct: 484 EFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAI 543
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AFGL+STS G + + KNLRICGDCHNA K IS I REI +RDT RFH F+ G CSCGD
Sbjct: 544 AFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGD 603
Query: 676 YW 677
YW
Sbjct: 604 YW 605
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 55/336 (16%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQL---RIASARQLFDQIPQPDLVSYN------ 100
L+ A AF TQ ++N LLA YA+ R+A AR+LFD IP PD VSYN
Sbjct: 23 LAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCH 82
Query: 101 -------------------------TLISAYADCGDTESALSLFKDMREKRFDTDGFTLS 135
T++S + G E A ++F+ M + + + +
Sbjct: 83 FACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPAR----NAVSWN 138
Query: 136 GLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD----EAKRVFYE 189
++ ASS ++ + L F + +++L +G++D + ++
Sbjct: 139 AMVAARASSGDMGAAENL--------FRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFR 190
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-GLDMYTLASILTAFTSLEDLV 248
+++ VSWN++V Y ++ +AL++F+ MV + + TL+S+L ++L L
Sbjct: 191 AMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALG 250
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q H +K ++ +G+ L+ +Y KC GD+ D K+F+E+ D+V WN MISGY
Sbjct: 251 FGRQVHQWCMKLPLGRSITVGTSLLSMYCKC-GDLDDACKLFDEMHTKDIVAWNAMISGY 309
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+Q +A+ F+K+ G PD + + V++AC
Sbjct: 310 AQHGG-GRKAIKLFEKMKDEGVVPDWITLLAVLTAC 344
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 21/132 (15%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL+ Y + + A +LFD++ D+V++N +IS YA G A+ LF+ M+++ D
Sbjct: 274 LLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPD 333
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYC------------GFDHYASVNNSLLTCYSRNG 178
TL ++TA C+ L I C DHY+ + + L C R G
Sbjct: 334 WITLLAVLTA-----CIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVD--LLC--RAG 384
Query: 179 FLDEAKRVFYEM 190
L+ A + + M
Sbjct: 385 LLERAVNMIHSM 396
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 373 NALVAMYSKC---GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
N L+A Y+K G L DARRLFD +P + VS N++++ + G A R+F M
Sbjct: 42 NCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVR 101
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
++ N T VS LS G + E + F M ++ M+ +G +
Sbjct: 102 DVTSWN-TMVSGLS---KNGAIEEAEAMFRAMP-----ARNAVSWNAMVAARASSGDMGA 152
Query: 490 AERLIEAMPFNPGSI--------------ALKAANHFLQLEPSNAVPY-VMLANIYAASG 534
AE L P +I KA +F + N V + ++A S
Sbjct: 153 AENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSR 212
Query: 535 KWEEVATIRRLMRDRGVQKKP 555
+ + + ++ D VQ P
Sbjct: 213 AGDALRVFKTMVEDAIVQPNP 233
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G+ +H +K + S + + +Y KCG L A F++
Sbjct: 235 TLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEM 294
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
++ ++N +++ YA+ A +LF+++ PD ++ +++A G + +
Sbjct: 295 HTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGI 354
Query: 117 SLFKDMRE 124
F+ M+E
Sbjct: 355 QCFETMQE 362
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/712 (32%), Positives = 364/712 (51%), Gaps = 70/712 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R++ GK +H +K + L+N + +YSKCGC++ A F
Sbjct: 44 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 103
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT++ ++ GDT + +
Sbjct: 104 NNKNV-------------------------------VSWNTMVGGFSAEGDTHGTFDVLR 132
Query: 121 DMREKRFDTDGFTLSGL----ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M D ++ L + + L +K+LHC ++ F + V N+ + Y++
Sbjct: 133 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 192
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L A+RVF+ + K SWN+++ + Q + +L +M L D +T+ S
Sbjct: 193 CGSLSYAQRVFHGI-RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 251
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A + L+ L G + H +I++ ++ + ++ LY C G++ +F+ +
Sbjct: 252 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC-GELCTVQALFDAMEDK 310
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
LV WNT+I+GY Q + D+ALG F+++ G S + V ACS L S LG++
Sbjct: 311 SLVSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 369
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA +K + + + +L+ MY+K G++ + ++F+ + E +T S N+MI GY HG+
Sbjct: 370 HAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 428
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA++LFE M T P ++TF+ VL+AC H+G + EG +Y MK FG +P +HY+
Sbjct: 429 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 488
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL------------------KAANHFLQLEP 517
C+ID+LGRAG+L A R++ + + K A +LEP
Sbjct: 489 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 548
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
YV+L+N+YA GKWE+V +R+ M + ++K G SWIE+ +++ FV +
Sbjct: 549 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 608
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+EI + + K+ + GY PD K ++L HSEKLA+ +GL+ TS G
Sbjct: 609 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 668
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLRIC DCHNA K IS + REI VRD RFH FK+G CSCGDYW
Sbjct: 669 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 197/413 (47%), Gaps = 16/413 (3%)
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFD----TDGFTLSGL--ITASSNNLCLI 148
+ VS+N++I ++D G +E + L +M E+ D D TL + + A + L
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K +H A+ D +NN+L+ YS+ G + A+ +F +M K+ VSWN+MV +
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSA 120
Query: 209 HREGLEALQLFQEMVS--LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ + ++M++ + D T+ + + L + H + +K F N
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + + YAKC G + +VF I + WN +I G++Q + +L ++
Sbjct: 181 LVANAFVASYAKC-GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAHLQMK 238
Query: 327 RVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G PD + ++SACS L S LGK++H I+ + + + V +++++Y CG L
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD-LFVYLSVLSLYIHCGEL 297
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+ LFD M + + VS N++I GY Q+G AL +F M+ I I+ + V AC
Sbjct: 298 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 357
Query: 446 AHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + G++ + +K + E + +ID+ + G +T + ++ +
Sbjct: 358 SLLPSLRLGREAHAYALKHL--LEDDAFIACSLIDMYAKNGSITQSSKVFNGL 408
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/712 (32%), Positives = 364/712 (51%), Gaps = 70/712 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R++ GK +H +K + L+N + +YSKCGC++ A F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT++ ++ GDT + +
Sbjct: 354 NNKNV-------------------------------VSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 121 DMREKRFDTDGFTLSGL----ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M D ++ L + + L +K+LHC ++ F + V N+ + Y++
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L A+RVF+ + K SWN+++ + Q + +L +M L D +T+ S
Sbjct: 443 CGSLSYAQRVFHGI-RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A + L+ L G + H +I++ ++ + ++ LY C G++ +F+ +
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC-GELCTVQALFDAMEDK 560
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
LV WNT+I+GY Q + D+ALG F+++ G S + V ACS L S LG++
Sbjct: 561 SLVSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA +K + + + +L+ MY+K G++ + ++F+ + E +T S N+MI GY HG+
Sbjct: 620 HAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA++LFE M T P ++TF+ VL+AC H+G + EG +Y MK FG +P +HY+
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL------------------KAANHFLQLEP 517
C+ID+LGRAG+L A R++ + + K A +LEP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
YV+L+N+YA GKWE+V +R+ M + ++K G SWIE+ +++ FV +
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 858
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+EI + + K+ + GY PD K ++L HSEKLA+ +GL+ TS G
Sbjct: 859 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 918
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLRIC DCHNA K IS + REI VRD RFH FK+G CSCGDYW
Sbjct: 919 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 233/508 (45%), Gaps = 49/508 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T+ V+K C G D+ G ++H L +K LV
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE---------------------------- 220
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+VF N L++ Y + A QLFD +P+ +LVS+N++I ++D G +E + L
Sbjct: 221 ----DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 120 KDMREKRFD----TDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
+M E+ D D TL + + A + L K +H A+ D +NN+L+
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQLGLDM 231
YS+ G + A+ +F +M K+ VSWN+MV + + + ++M++ + D
Sbjct: 337 YSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ + + L + H + +K F N + + + YAKC G + +VF
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC-GSLSYAQRVFH 454
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
I + WN +I G++Q + +L ++ G PD + ++SACS L S
Sbjct: 455 GIRSKTVNSWNALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LGK++H I+ + + + V +++++Y CG L + LFD M + + VS N++I GY
Sbjct: 514 LGKEVHGFIIRNWLERD-LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEP 469
Q+G AL +F M+ I I+ + V AC+ + G++ + +K + E
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LED 630
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + G +T + ++ +
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGL 658
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 11/269 (4%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEE 292
L +L A +D+ G + H + S +N + + +I +YA C G D VF+
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDA 145
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCF-KKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ +L WN +IS YS+ E Y D+ L F + ++ PD ++ CVI AC+ +S
Sbjct: 146 LRSKNLFQWNAVISSYSRNELY-DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G +H L +K + + + V NALV+ Y G + DA +LFD MPE N VS NSMI +
Sbjct: 205 IGLAVHGLVVKTGLVED-VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 411 AQHGIGMEALRLFEWMLETN----IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ +G E+ L M+E N P T V+VL CA ++ G+ +
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-R 322
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ E + ++D+ + G +T+A+ + +
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFK 351
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G++IH L N + ++ MY+ CG+ +D+R +FD + N N++I+ Y
Sbjct: 102 MGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY 161
Query: 411 AQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+++ + E L F E + T++ P + T+ V+ ACA V G ++ G
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVE 220
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++ G G +TDA +L + MP
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMP 249
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/579 (37%), Positives = 340/579 (58%), Gaps = 37/579 (6%)
Query: 132 FTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
FT S +++AS+ + ++ +QLH L GFD V +L+ Y++ + A RVF +
Sbjct: 11 FTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQ 70
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLV 248
M E ++ VSWNSM+V + + A+ +F++++ + + + +++S+L+A ++ L
Sbjct: 71 MPE-RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLN 129
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q H ++K G +++ + L+D+Y KC + +K+F+ + D+V WN ++ G+
Sbjct: 130 FGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRF-FDEGVKLFQCVGDRDVVTWNVLVMGF 188
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q +++ ++A F + R G PD+ SF V+ + ++L+ G IH IK+ N
Sbjct: 189 VQNDKF-EEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKN 247
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + +L+ MY+KCG+L DA ++F+ + +HN +S +MI+ Y HG + + LFE ML
Sbjct: 248 -MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 306
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
I P+++TFV VLSAC+HTG+V EG +F+ MK + P EHY+CM+DLLGRAG L
Sbjct: 307 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 366
Query: 488 TDAERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVPYVMLANIY 530
+A+R IE+MP P G++ + +AA ++EP N YV+LAN+
Sbjct: 367 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMC 426
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
SG+ EE +RRLM GV+K+PG SWI+VK VF A D SH EI+ LE++
Sbjct: 427 TRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLE 486
Query: 591 RKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
+ +K+ GYV ++E+ L +HSEKLA+AFGLL+ PI + KNLR CG
Sbjct: 487 KLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCG 546
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CH +K S I REI VRD RFH F DG CSCGDYW
Sbjct: 547 HCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 211/417 (50%), Gaps = 23/417 (5%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F+ AN+F L+ YA+ + SA ++FDQ+P+ +LVS+N++I + +
Sbjct: 39 HGFD----ANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDR 94
Query: 115 ALSLFKD-MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLL 171
A+ +FKD +REK + ++S +++A +N L +Q+H + + G V NSL+
Sbjct: 95 AVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLM 154
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
Y + F DE ++F +G+ +D V+WN +V+ + Q+ + EA F M + D
Sbjct: 155 DMYFKCRFFDEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDE 213
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+ +++L + SL L G H +IK G+ +N I LI +YAKC G + D +VFE
Sbjct: 214 ASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKC-GSLVDAYQVFE 272
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
I +++ W MIS Y Q ++Q + F+ + G P +FVCV+SACS+
Sbjct: 273 GIEDHNVISWTAMISAY-QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 331
Query: 352 GKQIHALTIKIEIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG- 409
H ++K N + A +V + + G L++A+R + MP T S+ + G
Sbjct: 332 EGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 391
Query: 410 ---YAQHGIGMEAL-RLFEWMLETNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMM 461
Y +G EA RLFE + P N +V + + C +G++ E + +M
Sbjct: 392 CRKYGNLKMGREAAERLFE------MEPYNPGNYVLLANMCTRSGRLEEANEVRRLM 442
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 158/325 (48%), Gaps = 24/325 (7%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ +T +SIL+A + ++ G Q H+ + K GF N +G+ L+D+YAKC+ DM ++V
Sbjct: 9 NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCA-DMHSAVRV 67
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK-LNRVGYHPDDCSFVCVISACSNLS 348
F+++P+ +LV WN+MI G+ Y D+A+G FK L P++ S V+SAC+N+
Sbjct: 68 FDQMPERNLVSWNSMIVGFFHNNLY-DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG 126
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+ G+Q+H + +K + V N+L+ MY KC ++ +LF + + + V+ N ++
Sbjct: 127 GLNFGRQVHGVVVKFGLVP-LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLV 185
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
G+ Q+ EA F M I P +F +VL + A + +G + + G+
Sbjct: 186 MGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKL-GY 244
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLA 527
+I + + G L DA ++ E +E N + + +
Sbjct: 245 VKNMCILGSLITMYAKCGSLVDAYQVFEG------------------IEDHNVISWTAMI 286
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQ 552
+ Y G +V + M G++
Sbjct: 287 SAYQLHGCANQVIELFEHMLSEGIE 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 132/306 (43%), Gaps = 39/306 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
VL C L G+ +H + +K LVP + Y+ N + +Y KC F++
Sbjct: 118 VLSACANMGGLNFGRQVHGVVVKFGLVPLT-YVMNSLMDMYFKC-------RFFDE---- 165
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+LF + D+V++N L+ + E A + F MR
Sbjct: 166 --------------------GVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR 205
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ D + S ++ +S++ L + +H I G+ + SL+T Y++ G L
Sbjct: 206 REGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLV 265
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A +VF E E + +SW +M+ AY H + ++LF+ M+S + T +L+A
Sbjct: 266 DAYQVF-EGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSAC 324
Query: 242 TSLEDLVGGL-QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ + GL F++ + + ++DL + +G + + + E +P +P
Sbjct: 325 SHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGR-AGWLDEAKRFIESMPMKPTPS 383
Query: 300 LWNTMI 305
+W ++
Sbjct: 384 VWGALL 389
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 50/258 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHAL-----YLKNLVPFSAYLSNHFILLYSKCGCLSAAHH 55
+F VL + L G ++H Y+KN+ + I +Y+KCG L A+
Sbjct: 215 SFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGS-----LITMYAKCGSLVDAYQ 269
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGD 111
F + NV S+ +++AY +LF+ + +P V++ ++SA + G
Sbjct: 270 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 329
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
E L+ F M K++H + G +HYA + + L
Sbjct: 330 VEEGLAHFNSM--------------------------KKIH--DMNPGPEHYACMVDLL- 360
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLG 228
R G+LDEAKR M W +++ A YG + G EA + EM G
Sbjct: 361 ---GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPG 417
Query: 229 LDMYTLASILTAFTSLED 246
+ LA++ T LE+
Sbjct: 418 -NYVLLANMCTRSGRLEE 434
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 330/554 (59%), Gaps = 25/554 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
NV+ + L+ YA+ R+ A F +I +P+ VS+N LI+ + DT++A L M
Sbjct: 81 NVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAFWLLGLME 140
Query: 124 EKRFDT-DGFTLSGLITASSNNL-C-LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
K T D T + L+T + + C L+KQ+H + G +H ++ N++++ Y+ G +
Sbjct: 141 MKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLV 200
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+AKRVF +G KD +SWNSM+ +H + A +LF EM + D+YT I++A
Sbjct: 201 SDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSA 260
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMKVFEEIPQPDLV 299
+ E G H +IK G Q + + + LI +Y + +G M+D + +FE + DLV
Sbjct: 261 CSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLV 320
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN++++G+SQ S+ A+ F+ L DD +F V+ +CS+L+ LG+Q HAL
Sbjct: 321 SWNSIMTGFSQNG-LSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHAL 379
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGM 417
K SN V ++L+ MYSKCG +E+AR+ F+++ +HNT++ N+MI GYAQHG G
Sbjct: 380 ATKSSFESNEF-VTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQ 438
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+L LF M N+ ++TF ++L+AC+HTG + EG + + M+ ++ +P EHY+
Sbjct: 439 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAA 498
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+DLLGRAG + + LIE+MP NP + LK ANH L++EP +
Sbjct: 499 VDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 558
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV L+++Y+ KWEE A ++++M++RGV+K PG+SWIE++ Q++ F AED SH + K
Sbjct: 559 FAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIEIRNQVNAFNAEDRSHSLSK 618
Query: 581 EIHNYLEEMSRKMK 594
EI+ +E+++++M+
Sbjct: 619 EIYLMIEDLTQEMQ 632
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 227/432 (52%), Gaps = 16/432 (3%)
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI--TASSN 143
+LFD++PQ D VS+NT+IS Y CG E++ LF DM+ DG++ S L+ AS+
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
L +Q+H L + G++ V +SL+ Y++ +++A F E+ E + VSWN+++
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILE-PNSVSWNALI 120
Query: 204 VAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKS 260
+ Q R+ A L M + + +D T A +LT + + L Q HA ++K
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLD--DPMFCNLLKQVHAKVLKL 178
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPDLVLWNTMISGYSQKEEYSDQAL 319
G I + +I YA C G + D +VF+ + DL+ WN+MI+G S K E + A
Sbjct: 179 GLEHEITICNAMISSYANC-GLVSDAKRVFDGLGGSKDLISWNSMIAGLS-KHEQKESAF 236
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAM 378
F +++R D ++ ++SACS S GK +H L IK + SV+NAL++M
Sbjct: 237 ELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLE-QVTSVSNALISM 295
Query: 379 YSK--CGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
Y + G ++DA LF+ + + VS NS++ G++Q+G+ +A++ F ++ +NI +
Sbjct: 296 YIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDY 355
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
F +VL +C+ + GQ+ ++ FE S +I + + G + +A + E
Sbjct: 356 AFSAVLRSCSDLATLQLGQQTHALATKS-SFESNEFVTSSLILMYSKCGVIENARKCFEQ 414
Query: 497 MPFNPGSIALKA 508
+ +IA A
Sbjct: 415 ISSKHNTIAWNA 426
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 183/386 (47%), Gaps = 43/386 (11%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
K +HA LK + + N I Y+ CG +S
Sbjct: 169 KQVHAKVLKLGLEHEITICNAMISSYANCGLVS--------------------------- 201
Query: 79 LRIASARQLFDQI-PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
A+++FD + DL+S+N++I+ + ESA LF +M +TD +T +G+
Sbjct: 202 ----DAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGI 257
Query: 138 ITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NGFLDEAKRVFYEMGEI 193
++A S + K LH L I G + SV+N+L++ Y + G + +A +F + +
Sbjct: 258 VSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESL-KP 316
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
KD VSWNS++ + Q+ +A++ F+ + S + +D Y +++L + + L L G Q
Sbjct: 317 KDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQT 376
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYSQKE 312
HA KS F N + S LI +Y+KC G + + K FE+I + + WN MI GY+Q
Sbjct: 377 HALATKSSFESNEFVTSSLILMYSKC-GVIENARKCFEQISSKHNTIAWNAMILGYAQHG 435
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNRIS 370
+L F ++ D +F +++ACS+ L + ++++ +I+ R+
Sbjct: 436 S-GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQP-RME 493
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMP 396
A V + + G + + L + MP
Sbjct: 494 HYAAAVDLLGRAGLVNKVKELIESMP 519
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 31/242 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ ++ C G GKSLH L +K + +SN I +Y +
Sbjct: 253 TYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQ-------------- 298
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F V+ A LF+ + DLVS+N++++ ++ G +E A+ F+
Sbjct: 299 -----FPTGVM----------KDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFR 343
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R + D + S ++ + S+ L L +Q H LA F+ V +SL+ YS+ G
Sbjct: 344 YLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCG 403
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A++ F ++ + ++WN+M++ Y QH G +L LF +M + + LD T +IL
Sbjct: 404 VIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAIL 463
Query: 239 TA 240
TA
Sbjct: 464 TA 465
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
M++F+E+PQ D V WNTMISGY+ + + + F + R G + D SF ++ ++
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKL-ENSWCLFTDMKRCGCYVDGYSFSRLLKGIAS 59
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
LG+Q+H L +K N + V ++LV MY+KC +EDA F + E N+VS N+
Sbjct: 60 AKRFDLGEQVHGLVVKGGYECN-VYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNA 118
Query: 406 MIAGYAQHGIGMEALRLFEWM-LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+IAG+ Q A L M ++ + + TF +L+ + + + +++K +
Sbjct: 119 LIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLT-------LLDDPMFCNLLKQV 171
Query: 465 ------FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G E E + MI G ++DA+R+ + +
Sbjct: 172 HAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGL 210
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ-T 60
F VL++C L G+ HAL K+ + ++++ IL+YSKCG + A F Q +
Sbjct: 357 FSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQIS 416
Query: 61 QHANVFSFNVLLAAYAR----QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
N ++N ++ YA+ Q+ + Q+ +Q + D V++ +++A + G + L
Sbjct: 417 SKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 476
Query: 117 SLFKDMR 123
L M
Sbjct: 477 ELLNSME 483
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/735 (31%), Positives = 376/735 (51%), Gaps = 73/735 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C D+ G +H LK + L+N+ + LYSKCG L F +
Sbjct: 135 TFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKM 194
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
H +V S+N +++ Y + A LFD++ PD ++ +L+S A D E
Sbjct: 195 THRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGK 254
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLC-LIKQLHCLAIYCGFDHYASV-NNSLLTCY 174
L + + + G L+ L+ S C + + H L C V +L++ Y
Sbjct: 255 RLHLYIVDNKLWIRGSLLNCLVDMYSK--CGKMDEAHGLLSRCDESEVDVVLWTTLVSGY 312
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ +D+A+++F +M E + VSW +M+ Y Q E+L+LFQ+M + D L
Sbjct: 313 VKSNKIDKARQLFDKMNE-RSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVAL 371
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE-- 292
++L+A LED G HA ++ G + +G+ L+DLYAKC G + + ++ FE+
Sbjct: 372 VTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKC-GKLDEALRTFEQLP 430
Query: 293 -----------------------------IPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
IP+ D+V WNTM++ Y K + +++ F
Sbjct: 431 CKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYV-KHDLFNESFEIFC 489
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMY 379
K+ PD + + ++S+C+ + G H + + + I N I ++ AL+ MY
Sbjct: 490 KMQSSNVKPDKTTLISLLSSCAKV----GALNHGIWVNVYIEKNEIGIDAMLGTALIDMY 545
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
KCG +E A +F ++ E N +M+A YA G +EA+ L+ M E + P ++TF+
Sbjct: 546 GKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFI 605
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
++L+AC+H G V EG KYF+ ++ + P HY CM+DLLGR G L + + IE MP
Sbjct: 606 ALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPI 665
Query: 500 NPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
P +A +A ++++P+N +V+L+NIYA +G+W++V+ +
Sbjct: 666 EPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKV 725
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK 602
R + + GV K+PGF+ IE +H FVA S+ + +I L+++ R++ + D
Sbjct: 726 RTKLHETGVPKQPGFTMIEQNGVVHEFVA---SNLVSADILCMLQDIERRLLVKQELSDT 782
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
+ HSE+LAVAFGL++ PI V+ ++R+C DCH+ +K IS REI +RD YR
Sbjct: 783 TSQ---HSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYR 839
Query: 663 FHCFKDGRCSCGDYW 677
FH F DG CSC DYW
Sbjct: 840 FHRFTDGHCSCKDYW 854
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 237/545 (43%), Gaps = 108/545 (19%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
A Q+ +P+ + +NTL+ G + L + M + D T LI A
Sbjct: 86 AHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCK 145
Query: 144 N--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
N + L ++H + CGF S+NN+L+ YS+ G L E ++F +M +D +SWN+
Sbjct: 146 NFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTH-RDVISWNT 204
Query: 202 MVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
M+ Y G +R EAL LF EM+ + D T+ S+++ L+DL G + H +++
Sbjct: 205 MISCYVLKGMYR---EALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIV 261
Query: 259 KSGFHQNSHIGSGLIDLYAKC--------------------------------SGDMRDC 286
+ + + L+D+Y+KC S +
Sbjct: 262 DNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKA 321
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
++F+++ + LV W TM+SGY Q Y ++L F+++ PD+ + V V+SAC +
Sbjct: 322 RQLFDKMNERSLVSWTTMMSGYVQGGYYC-ESLELFQQMRFENVIPDEVALVTVLSACVH 380
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED------------------ 387
L LG+ +HA + + + + NAL+ +Y+KCG L++
Sbjct: 381 LEDFDLGRSVHAFIVTYGMLVDGF-LGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNS 439
Query: 388 -------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
AR F+++PE + VS N+M+ Y +H + E+ +F M +N+ P
Sbjct: 440 MLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPD 499
Query: 435 NITFVSVLSACAHTGKVAEG-------QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
T +S+LS+CA G + G +K + M G + +ID+ G+ G +
Sbjct: 500 KTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLG--------TALIDMYGKCGCV 551
Query: 488 TDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
A + F Q+ N + + YA G+ E + M
Sbjct: 552 EMAYEI------------------FTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEME 593
Query: 548 DRGVQ 552
+RGV+
Sbjct: 594 ERGVK 598
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 7/244 (2%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM-KVFEEIPQPDLVLWNTMISGYSQK 311
HAHLI + + I S ++ S + DC ++ +P+ ++WNT++ K
Sbjct: 54 IHAHLITANLIHDPEITSQVLAFLL--SVNNLDCAHQILSYSHEPESIIWNTLLEN-KLK 110
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRIS 370
E + L C+ + G D +F +I AC N LG ++H +K N+ S
Sbjct: 111 EGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNK-S 169
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+NN L+ +YSKCG L++ +LF++M + +S N+MI+ Y G+ EAL LF+ ML +
Sbjct: 170 LNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSG 229
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ P IT VS++S CA + G++ + D G +C++D+ + GK+ +A
Sbjct: 230 VLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDN-KLWIRGSLLNCLVDMYSKCGKMDEA 288
Query: 491 ERLI 494
L+
Sbjct: 289 HGLL 292
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/705 (32%), Positives = 374/705 (53%), Gaps = 48/705 (6%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV---------- 65
+GKSL L L + + N + ++ + C ++ + HA+V
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+ N L+A Y R ++ A ++ Q+ D+V++N+LI Y + AL F DM
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 126 RFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+D +++ +I AS +NL +LH I G+D V N+L+ YS+
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
R F M + KD +SW +++ Y Q+ +EAL+LF+++ ++ +D L SIL A +
Sbjct: 441 GRAFLRMHD-KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L+ ++ + H H+++ G ++ I + L+D+Y KC +M +VFE I D+V W +
Sbjct: 500 LKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR-NMGYATRVFESIKGKDVVSWTS 557
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
MIS + S +A+ F+++ G D + +C++SA ++LS + G++IH ++
Sbjct: 558 MISSSALNGNES-EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S+ A+V MY+ CG+L+ A+ +FDR+ + SMI Y HG G A+ L
Sbjct: 617 GF-CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F+ M N+ P +I+F+++L AC+H G + EG+ + +M+ + EP EHY C++D+LG
Sbjct: 676 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 735
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
RA + +A ++ M P + I AA L+LEP N V+
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
++N++A G+W +V +R M+ G++K PG SWIE+ ++H F A D SHP KEI+
Sbjct: 796 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEK 855
Query: 586 LEEMSRKM-KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
L E++RK+ ++ GYV D K + L HSE++A+A+GLL T + + K
Sbjct: 856 LSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITK 915
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+C DCH K +S + R+I +RD RFH F+ G CSCGD W
Sbjct: 916 NLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 215/449 (47%), Gaps = 39/449 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSA-YLSNHFILLYSKCGCLSAAHHAFNQ 59
F VL+ C RR + G+ LH+ K F +L+ + +Y KCG L
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLD-------- 133
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
A ++FD++P ++NT+I AY G+ SAL+L+
Sbjct: 134 -----------------------DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY 170
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+MR + + L+ A + ++ +LH L + G+ + N+L++ Y++N
Sbjct: 171 WNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKN 230
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
L A+R+F E D V WNS++ +Y + LE L+LF+EM + YT+ S
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSA 290
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
LTA G + HA ++KS H + ++ + LI +Y +C G M ++ ++
Sbjct: 291 LTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC-GKMPQAERILRQMNNA 349
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQI 355
D+V WN++I GY Q Y +AL F + G+ D+ S +I+A LS L G ++
Sbjct: 350 DVVTWNSLIKGYVQNLMYK-EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA IK SN + V N L+ MYSKC R F RM + + +S ++IAGYAQ+
Sbjct: 409 HAYVIKHGWDSN-LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EAL LF + + + + S+L A
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 148/360 (41%), Gaps = 46/360 (12%)
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
++P P L ++ +++ Q+ + S+ P + +F V+ C + S
Sbjct: 51 QVPSPKLACFDGVLTEAFQRLDVSENN------------SPVE-AFAYVLELCGKRRAVS 97
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+Q+H+ K + LV MY KCG+L+DA ++FD MP+ + N+MI Y
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
+G AL L+ M +P +F ++L ACA + G + S++ + G+
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL-GYHST 216
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
G + ++ + + L+ A RL + E +AV + + + Y
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQ-----------------EKGDAVLWNSILSSY 259
Query: 531 AASGKWEEVATIRRLMRDRGVQKKP-----------GFSWIEVKKQMHVFVAEDGSHPMI 579
+ SGK E + R M G GFS+ ++ K++H V + +H
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
+ N L M + G +P E+ L + V + L Y + ++ + L D
Sbjct: 320 LYVCNALIAM---YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/677 (34%), Positives = 353/677 (52%), Gaps = 113/677 (16%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F N +L YA+ ++ AR LF+Q+ + L +N++IS G+ A+ LF M +
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+IT +S ++T Y++ G L+ A+R
Sbjct: 191 ----------NIITWTS---------------------------MVTGYAKMGDLESARR 213
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F EM E + VSWN+M AY Q EAL LF +M+ + D T +++ +S+
Sbjct: 214 YFDEMPE-RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIG 272
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS------------GDMRDCM------ 287
D + + NS + + L+D++AK G R+ +
Sbjct: 273 DPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMI 332
Query: 288 -------------KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPD 333
++F+ +P+ D+V WN+MI+GY+Q E S ++ FK++ + + PD
Sbjct: 333 SAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGE-SAMSIELFKEMISCMDIQPD 391
Query: 334 DCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKCGNLEDAR 389
+ + V+SAC ++ +L L I +R I + N+L+ MYSKCG++ DA
Sbjct: 392 EVTIASVLSACGHIG-ALKLSYWVLDI---VREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
R+F M + VS N++I+G+A +G G EA++L M E I P ++T++ VL+AC+H G
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAG 507
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI 504
+ EG+ F ++ P +HY+CM+DLLGRAG+L +A+ LI++MP P GS+
Sbjct: 508 LLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSL 562
Query: 505 ------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA+ +LEP N YV+L+NIYA+ G+WE+V +R +M+ G++
Sbjct: 563 LNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLK 622
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE--------- 603
K G SW+E K Q+H F D SH K+I+ L E+ RKMK+ G+V DK
Sbjct: 623 KSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEE 682
Query: 604 ---KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+ L HSEKLA+ F LL + G I V+KNLRIC DCH AIK IS + GREI VRD
Sbjct: 683 EKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDN 742
Query: 661 YRFHCFKDGRCSCGDYW 677
RFHCF +G CSC DYW
Sbjct: 743 NRFHCFSEGMCSCHDYW 759
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 227/536 (42%), Gaps = 106/536 (19%)
Query: 55 HAFNQTQHANVFSFNVLLAAYAR-QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
H + + H++ + ++LL R A +F P PD Y+ ++ Y+ G
Sbjct: 23 HLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHN 82
Query: 114 SALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGF--DHYASVNNS 169
+SLFK F LI S NL H + G DH+ + N+
Sbjct: 83 QVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNL-----FHAYVLKLGHIDDHF--IRNA 135
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+L Y++NG +D A+ +F +M E + WNSM+ + EA+ LF M +
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAE-RTLADWNSMISGCWKSGNETEAVVLFNMMPA----R 190
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
++ T S++T + + GD+ +
Sbjct: 191 NIITWTSMVTGYAKM------------------------------------GDLESARRY 214
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-S 348
F+E+P+ +V WN M S Y+QK E +AL F ++ G PDD ++V IS+CS++
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQK-ECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGD 273
Query: 349 PSLGKQI----------------------HALTIKIEIRSN--------RISVN-NALVA 377
P+L I HA +EI N R +V N +++
Sbjct: 274 PTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMIS 333
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNI 436
Y++ G L AR LFD MP+ + VS NSMIAGYAQ+G ++ LF+ M+ +I P +
Sbjct: 334 AYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEV 393
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T SVLSAC H G + ++++ + ++ +I + + G + DA R+ +
Sbjct: 394 TIASVLSACGHIGALKLSYWVLDIVREK-NIKLGISGFNSLIFMYSKCGSVADAHRIFQT 452
Query: 497 MPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
M + V + L + +AA+G +E + M + G++
Sbjct: 453 MG------------------TRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 228/470 (48%), Gaps = 50/470 (10%)
Query: 17 TGKSLHALYLKNLVPFSAYLS-NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+G A+ L N++P ++ + Y+K G L +A F++ +V S+N + +AY
Sbjct: 174 SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 76 ARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
A++ A LF Q+ + PD ++ IS+ + GD A S+ + + +K +
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 132 FTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNS-----LLTCYSRNGFLDEAK 184
F + L+ A NL + + + FD S N+ +++ Y+R G L A+
Sbjct: 294 FVKTALLDMHAKFGNLEIARNI--------FDELGSQRNAVTWNIMISAYTRVGKLSLAR 345
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS-LQLGLDMYTLASILTAFTS 243
+F M + +D VSWNSM+ Y Q+ E +++LF+EM+S + + D T+AS+L+A
Sbjct: 346 ELFDNMPK-RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGH 404
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIG----SGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+G L+ ++ +N +G + LI +Y+KC G + D ++F+ + D+V
Sbjct: 405 ----IGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKC-GSVADAHRIFQTMGTRDVV 459
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
+NT+ISG++ + +A+ + G PD +++ V++ACS+ + GK +
Sbjct: 460 SFNTLISGFAAN-GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK- 517
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIG 416
I++ + +V + + G L++A+ L MP H V + + A +G
Sbjct: 518 ----SIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVG 573
Query: 417 MEAL---RLFEWMLETNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMMK 462
+ L +LFE + P N+ +V + + A G+ + ++ MMK
Sbjct: 574 LGELAASKLFE------LEPQNLGNYVLLSNIYASFGRWEDVKRVREMMK 617
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ + +C D S+ + + + ++++ + +++K G L A + F++
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDEL 319
Query: 61 -QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
N ++N++++AY R +++ AR+LFD +P+ D+VS+N++I+ YA G++ ++ LF
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 120 KDMRE-KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN--NSLLTCYSR 176
K+M D T++ +++A + L L I + ++ NSL+ YS+
Sbjct: 380 KEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSK 439
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + +A R+F MG +D VS+N+++ + + G EA++L M + D T
Sbjct: 440 CGSVADAHRIFQTMG-TRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIG 498
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+LTA + HA L+ G + I + +D YA C D+
Sbjct: 499 VLTACS-----------HAGLLNEGKNVFKSIQAPTVDHYA-CMVDL 533
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 13/233 (5%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
MY L ++ + +++ L QFH HL+ + H +++ S L+ + +F
Sbjct: 1 MYELVALASKISNIRQL---RQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIF 57
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
P PD +++ M+ YS+ + +Q + FK + + P ++ +I L+
Sbjct: 58 TSSPSPDASVYSCMLKYYSRMGAH-NQVVSLFKCTHSLNLRPQPFVYIYLI----KLAGK 112
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G HA +K+ + + NA++ MY+K G ++ AR LF++M E NSMI+G
Sbjct: 113 SGNLFHAYVLKLGHIDDHF-IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+ G EA+ LF M NI IT+ S+++ A G + ++YF M +
Sbjct: 172 WKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPE 220
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/677 (34%), Positives = 353/677 (52%), Gaps = 113/677 (16%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F N +L YA+ ++ AR LF+Q+ + L +N++IS G+ A+ LF M +
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
+IT +S ++T Y++ G L+ A+R
Sbjct: 191 ----------NIITWTS---------------------------MVTGYAKMGDLESARR 213
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F EM E + VSWN+M AY Q EAL LF +M+ + D T +++ +S+
Sbjct: 214 YFDEMPE-RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIG 272
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS------------GDMRDCM------ 287
D + + NS + + L+D++AK G R+ +
Sbjct: 273 DPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMI 332
Query: 288 -------------KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPD 333
++F+ +P+ D+V WN+MI+GY+Q E S ++ FK++ + + PD
Sbjct: 333 SAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGE-SAMSIELFKEMISCMDIQPD 391
Query: 334 DCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVN----NALVAMYSKCGNLEDAR 389
+ + V+SAC ++ +L L I +R I + N+L+ MYSKCG++ DA
Sbjct: 392 EVTIASVLSACGHIG-ALKLSYWVLDI---VREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
R+F M + VS N++I+G+A +G G EA++L M E I P ++T++ VL+AC+H G
Sbjct: 448 RIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAG 507
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI 504
+ EG+ F ++ P +HY+CM+DLLGRAG+L +A+ LI++MP P GS+
Sbjct: 508 LLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSL 562
Query: 505 ------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA+ +LEP N YV+L+NIYA+ G+WE+V +R +M+ G++
Sbjct: 563 LNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLK 622
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE--------- 603
K G SW+E K Q+H F D SH K+I+ L E+ RKMK+ G+V DK
Sbjct: 623 KSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEE 682
Query: 604 ---KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+ L HSEKLA+ F LL + G I V+KNLRIC DCH AIK IS + GREI VRD
Sbjct: 683 EKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDN 742
Query: 661 YRFHCFKDGRCSCGDYW 677
RFHCF +G CSC DYW
Sbjct: 743 NRFHCFSEGMCSCHDYW 759
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 227/536 (42%), Gaps = 106/536 (19%)
Query: 55 HAFNQTQHANVFSFNVLLAAYAR-QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
H + + H++ + ++LL R A +F P PD Y+ ++ Y+ G
Sbjct: 23 HLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHN 82
Query: 114 SALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGF--DHYASVNNS 169
+SLFK F LI S N+ H + G DH+ + N+
Sbjct: 83 QVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNM-----FHAYVLKLGHIDDHF--IRNA 135
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+L Y++NG +D A+ +F +M E + WNSM+ + EA+ LF M +
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAE-RTLADWNSMISGCWKSGNETEAVVLFNMMPA----R 190
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
++ T S++T + + GD+ +
Sbjct: 191 NIITWTSMVTGYAKM------------------------------------GDLESARRY 214
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-S 348
F+E+P+ +V WN M S Y+QK E +AL F ++ G PDD ++V IS+CS++
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQK-ECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGD 273
Query: 349 PSLGKQI----------------------HALTIKIEIRSN--------RISVN-NALVA 377
P+L I HA +EI N R +V N +++
Sbjct: 274 PTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMIS 333
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNI 436
Y++ G L AR LFD MP+ + VS NSMIAGYAQ+G ++ LF+ M+ +I P +
Sbjct: 334 AYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEV 393
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T SVLSAC H G + ++++ + ++ +I + + G + DA R+ +
Sbjct: 394 TIASVLSACGHIGALKLSYWVLDIVREK-NIKLGISGFNSLIFMYSKCGSVADAHRIFQT 452
Query: 497 MPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
M + V + L + +AA+G +E + M + G++
Sbjct: 453 MG------------------TRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 228/470 (48%), Gaps = 50/470 (10%)
Query: 17 TGKSLHALYLKNLVPFSAYLS-NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY 75
+G A+ L N++P ++ + Y+K G L +A F++ +V S+N + +AY
Sbjct: 174 SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233
Query: 76 ARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
A++ A LF Q+ + PD ++ IS+ + GD A S+ + + +K +
Sbjct: 234 AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293
Query: 132 FTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNS-----LLTCYSRNGFLDEAK 184
F + L+ A NL + + + FD S N+ +++ Y+R G L A+
Sbjct: 294 FVKTALLDMHAKFGNLEIARNI--------FDELGSQRNAVTWNIMISAYTRVGKLSLAR 345
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS-LQLGLDMYTLASILTAFTS 243
+F M + +D VSWNSM+ Y Q+ E +++LF+EM+S + + D T+AS+L+A
Sbjct: 346 ELFDNMPK-RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGH 404
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIG----SGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+G L+ ++ +N +G + LI +Y+KC G + D ++F+ + D+V
Sbjct: 405 ----IGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKC-GSVADAHRIFQTMGTRDVV 459
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHAL 358
+NT+ISG++ + +A+ + G PD +++ V++ACS+ + GK +
Sbjct: 460 SFNTLISGFAAN-GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK- 517
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIG 416
I++ + +V + + G L++A+ L MP H V + + A +G
Sbjct: 518 ----SIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVG 573
Query: 417 MEAL---RLFEWMLETNIPPTNI-TFVSVLSACAHTGKVAEGQKYFSMMK 462
+ L +LFE + P N+ +V + + A G+ + ++ MMK
Sbjct: 574 LGELAASKLFE------LEPQNLGNYVLLSNIYASFGRWEDVKRVREMMK 617
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ + +C D S+ + + + ++++ + +++K G L A + F++
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDEL 319
Query: 61 -QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
N ++N++++AY R +++ AR+LFD +P+ D+VS+N++I+ YA G++ ++ LF
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 120 KDMRE-KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN--NSLLTCYSR 176
K+M D T++ +++A + L L I + ++ NSL+ YS+
Sbjct: 380 KEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSK 439
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + +A R+F MG +D VS+N+++ + + G EA++L M + D T
Sbjct: 440 CGSVADAHRIFQTMG-TRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIG 498
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+LTA + HA L+ G + I + +D YA C D+
Sbjct: 499 VLTACS-----------HAGLLNEGKNVFKSIQAPTVDHYA-CMVDL 533
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 13/233 (5%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
MY L ++ + +++ L QFH HL+ + H +++ S L+ + +F
Sbjct: 1 MYELVALASKISNIRQL---RQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIF 57
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
P PD +++ M+ YS+ + +Q + FK + + P ++ +I L+
Sbjct: 58 TSSPSPDASVYSCMLKYYSRMGAH-NQVVSLFKCTHSLNLRPQPFVYIYLI----KLAGK 112
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G HA +K+ + + NA++ MY+K G ++ AR LF++M E NSMI+G
Sbjct: 113 SGNMFHAYVLKLGHIDDHF-IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+ G EA+ LF M NI IT+ S+++ A G + ++YF M +
Sbjct: 172 WKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPE 220
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 309/543 (56%), Gaps = 40/543 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR-EGLEALQLFQEMVS 224
V+NSL++ Y++ G LD+A +F M + ++ VSW ++V A EAL+ EM
Sbjct: 109 VSNSLVSMYAKFGMLDDALELFGGMPQ-RNVVSWTTVVAALANAPGRKKEALRFLVEMRR 167
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + YT +S+L A + L HA +IK G + + S LID Y K GD+
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKL-GDLD 223
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
VF+E+ DLV+WN++I+G++Q + A+ F ++ G+ + + V+ AC
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGD-GVGAMELFMRMKESGFLANQGTLTSVLRAC 282
Query: 345 SNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ + +G+Q+HA +K + + ++NAL+ MY KCG L DA LF RM + + +S
Sbjct: 283 TGMVMLEVGRQVHAHVLKYD---RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISW 339
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
++MI+G AQ+G +EAL++F+ M P NIT V VL AC+H G V +G YF M
Sbjct: 340 STMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDK 399
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK---------------- 507
+FG +PE EH +CM+DLLGRAGKL +A + I M F P S+ +
Sbjct: 400 LFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLAS 459
Query: 508 -AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA L+LEP + ++L+NIYA +W + MRD+GV+K+PG SWIE+ K +
Sbjct: 460 YAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLV 519
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLA 614
HVF+A + SHP I L + R+ K GYVP KE L +HSEKLA
Sbjct: 520 HVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLA 579
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFG +++ G+P+ +MKNLRICGDCH K +S G+ I +RD RFH F+ G CSCG
Sbjct: 580 IAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCG 639
Query: 675 DYW 677
DYW
Sbjct: 640 DYW 642
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 176/354 (49%), Gaps = 11/354 (3%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC-GDTESALSLFKDM 122
++F N L++ YA+ + A +LF +PQ ++VS+ T+++A A+ G + AL +M
Sbjct: 106 SLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEM 165
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
R + +T S ++ A ++ +H I G D V +SL+ Y + G LD
Sbjct: 166 RRDGVAANSYTFSSVLGACGTP-GVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
+ VF EM D V WNS++ + Q +G+ A++LF M + TL S+L A T
Sbjct: 225 GRGVFDEMVTC-DLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+ L G Q HAH++K + ++ + + L+D+Y KC G + D +F + D++ W+
Sbjct: 284 GMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKC-GCLLDADALFSRMHDRDVISWS 340
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTI 360
TMISG +Q S +AL F + G P++ + V V+ ACS+ L ++
Sbjct: 341 TMISGLAQNGR-SVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDK 399
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
I+ R N +V + + G L++A + M E ++V +++ H
Sbjct: 400 LFGIQPEREHC-NCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMH 452
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 33/275 (12%)
Query: 48 GCLSAAHHAFNQTQ-HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAY 106
G L+A H + ++VF + L+ AY + + S R +FD++ DLV +N++I+ +
Sbjct: 188 GVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGF 247
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYA 164
A GD A+ LF M+E F + TL+ ++ A + + L +Q+H A +D
Sbjct: 248 AQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVH--AHVLKYDRDL 305
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
++N+LL Y + G L +A +F M + +D +SW++M+ Q+ +EAL++F M +
Sbjct: 306 ILHNALLDMYCKCGCLLDADALFSRMHD-RDVISWSTMISGLAQNGRSVEALKVFDLMKA 364
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSG 271
+ T+ +L A + HA L++ G+H + H
Sbjct: 365 EGPTPNNITMVGVLFACS-----------HAGLVEDGWHYFRSMDKLFGIQPEREHCNC- 412
Query: 272 LIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
++DL + +G + + MK E+ +PD V+W T++
Sbjct: 413 MVDLLGR-AGKLDEAMKFIGEMKFEPDSVIWRTLL 446
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 38/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +HA LK L N + +Y KCGCL A F++
Sbjct: 274 TLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRM 331
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S++ +++ A+ R A ++FD + P P+ ++ ++ A + G E
Sbjct: 332 HDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGW 391
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M +K F ++ HC N ++ R
Sbjct: 392 HYFRSM-DKLFGIQP-----------------EREHC--------------NCMVDLLGR 419
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LDEA + EM D V W +++ A H+ A E++ L+
Sbjct: 420 AGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLE 469
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 314/568 (55%), Gaps = 42/568 (7%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK-----DEVSWNSMVV 204
Q+H L + G H V S + A V + + D +N+++
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199
Query: 205 AYGQHREG-LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
A+ Q AL+ + M + + +T +L A + L G HA ++K GF
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259
Query: 264 QNSHIGSGLIDLYAKCSGDMRD----CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
++ H+ + L+ +Y C D KVF+E P D V W+ MI GY++ S +A+
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGN-SARAV 318
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F+++ G PD+ + V V+SAC++L LGK + + + I + + + NAL+ M
Sbjct: 319 TLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRS-VELCNALIDM 377
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
++KCG+++ A ++F M VS SMI G A HG G+EA+ +F+ M+E + P ++ F
Sbjct: 378 FAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAF 437
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ VLSAC+H+G V +G YF+ M++MF P+ EHY CM+D+L RAG++ +A + AMP
Sbjct: 438 IGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMP 497
Query: 499 FNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + ++ A ++ EPS+ YV+L+NIYA +WE+
Sbjct: 498 VEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTK 557
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP- 600
+R +M +G++K PG + IE+ +++ FVA D SH KEI+ +EEM R++K+AGYVP
Sbjct: 558 VREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPT 617
Query: 601 -----------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
DKE L HSEKLA+AF LLST G PI ++KNLR+C DCH+A KFIS
Sbjct: 618 TSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISK 677
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ REI VRD RFH FK+G CSCGD+W
Sbjct: 678 VYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 150/319 (47%), Gaps = 36/319 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G L G ++HA +K ++ N + +Y C C +
Sbjct: 229 TFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYC-CCCQDGSSGP---- 283
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
SA+++FD+ P D V+++ +I YA G++ A++LF+
Sbjct: 284 ---------------------VSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFR 322
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D T+ +++A ++ L L K L + N+L+ +++ G
Sbjct: 323 EMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCG 382
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A +VF EM +++ VSW SM+V H GLEA+ +F EM+ + D +L
Sbjct: 383 DVDRAVKVFREM-KVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVL 441
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+A S LV ++ + +++ F + H G ++D+ ++ +G + + ++ +P
Sbjct: 442 SA-CSHSGLVDKGHYYFNTMENMFSIVPKIEHYGC-MVDMLSR-AGRVNEALEFVRAMPV 498
Query: 295 QPDLVLWNTMISGYSQKEE 313
+P+ V+W ++++ + E
Sbjct: 499 EPNQVIWRSIVTACHARGE 517
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/596 (35%), Positives = 342/596 (57%), Gaps = 36/596 (6%)
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
SA + + + E+R + + L A S L K++H + G+ + N L+
Sbjct: 9 SAANGNRTVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEM 68
Query: 174 YSRNGFLDEAKRVFYEMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y + G + EA+ VF ++ E D +SWN ++ AY Q+ G EAL LF+ M + +
Sbjct: 69 YGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQV 128
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL + + A SL G HA + ++ +G+ L++++ KC ++ VF+
Sbjct: 129 TLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCK-NVDAARAVFDS 187
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
+P+ +LV WN M++ YSQ + +A+ F+ ++ G PD +F+ +I AC+ L+ +
Sbjct: 188 LPRKNLVTWNNMVAVYSQNWQ-CKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTE 246
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+ +H I + +++ A++ Y KCG L++AR +FD + + NTV+ ++++A YA
Sbjct: 247 GRMVHDDITASGIPMD-VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYA 305
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKDMFGFEPE 470
Q+G EA+ L+ M++ + ITF+ +L AC+H G+ +G YF SM++D FG P
Sbjct: 306 QNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRD-FGVVPV 364
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFL 513
EHY +IDLLGR+G+L +E LI +MP+ P S A A A
Sbjct: 365 FEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIY 424
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+L+P ++ PY++L+N+Y+++G+ +E R+ MR RG+ K+PG S IEVK ++H F+A
Sbjct: 425 ELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQ 484
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLS 621
HP + IH +E + ++K+AGYV D KE+ L +HSE+LA+AFGL+S
Sbjct: 485 KLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLIS 544
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T G + ++KNLR+C DCH A+K IS + GR+I VRD RFH F++G CSCGDYW
Sbjct: 545 TPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 92/235 (39%), Gaps = 51/235 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C G+ +H + +P L + Y KCG
Sbjct: 230 TFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCG------------ 277
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ +AR +FD + + + V+++ +++AYA G A+ L+
Sbjct: 278 -------------------RLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYH 318
Query: 121 DMREKRFDTDGFTLSGLITASSNN----------LCLIKQLHCLAIYCGFDHYASVNNSL 170
+M + + +G T GL+ A S+ + +I+ + + F+HY +L
Sbjct: 319 EMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPV---FEHYL----NL 371
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEM 222
+ R+G L ++ + M D +W +++ A +G G +L E+
Sbjct: 372 IDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYEL 426
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/710 (33%), Positives = 368/710 (51%), Gaps = 85/710 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++ C ++ L T KSLH LK+ FS + + I Y KC
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFS-FFGHKLIDGYIKCSV------------ 50
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
I AR+LFD++P +V++N++IS++ G T+ A+ L+ +
Sbjct: 51 -------------------ITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSN 91
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFD-HYASVNNSLLTCYSRNG 178
M + D +T S + A S ++ H LA+ GF+ V ++ Y++ G
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ VF + + KD V + +++V Y QH EAL++F++MV ++ + YTLAS+L
Sbjct: 152 KMKDARFVFDRVLD-KDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVL 210
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ +L DLV G H ++K G + L+ +Y+KC+ + D +KVF +
Sbjct: 211 VSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNM-VEDSIKVFNSLAYASH 269
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W + I G Q + AL F+++ R P+ + ++ ACS+L+ G+QIHA
Sbjct: 270 VTWTSFIVGLVQNGR-EEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHA 328
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+T+K+ + N+ V+ AL+ +Y KCGN+E AR +FD + E + VS+N+MI YAQ+G G
Sbjct: 329 VTVKLGVDGNKF-VDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGH 387
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LFE + + + P +TF+S+L AC + G V EG + FS++++ E +HY+CM
Sbjct: 388 EALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCM 447
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNA 520
IDLLGRA + +A LIE NP I A K L P +
Sbjct: 448 IDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG 506
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+++L NIYA++GKW+ V ++ RD ++K P SW+++ +++H F+A D SHP
Sbjct: 507 GTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAH 566
Query: 581 EIHNYLEEMSRKMKQAGYVPD---------KEKR---LVHHSEKLAVAFGLLST-SYGEP 627
EI L E+ K+ GY PD +EK+ L +HSEKLA+AF L T
Sbjct: 567 EISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTA 626
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+CGD I RD RFH FK G CSC DYW
Sbjct: 627 IRIFKNLRVCGD--------------YIIARDAKRFHHFKGGICSCKDYW 662
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 138/270 (51%), Gaps = 5/270 (1%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
M S++ T+ + L H H++KSG S G LID Y KCS + + K+F
Sbjct: 1 MNCYTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCS-VITEARKLF 58
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS 350
+E+P +V WN+MIS + + + + +A+ + + G PD +F + A S + S
Sbjct: 59 DEMPNRHIVTWNSMISSHVSRGK-TKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVS 117
Query: 351 L-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G++ H L + + + V +V MY+K G ++DAR +FDR+ + + V ++I G
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y QHG+ EAL +FE M+ + I P T SVL +C + G + G+ ++ +G E
Sbjct: 178 YNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVK-YGLES 236
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ ++ + + + D+ ++ ++ +
Sbjct: 237 VVASQTSLLTMYSKCNMVEDSIKVFNSLAY 266
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 42/313 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +C DLV GK +H L +K + + +YSKC + + FN
Sbjct: 205 TLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSL 264
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AYA V++ + I G E ALS+F+
Sbjct: 265 -------------AYASH------------------VTWTSFIVGLVQNGREEVALSMFR 293
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M + FTLS ++ A S +L ++ +Q+H + + G D V+ +L+ Y +
Sbjct: 294 EMMRCSISPNHFTLSSILHACS-SLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKC 352
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +++A+ VF + E+ D VS N+M+ AY Q+ G EAL+LF+ + L L ++ T SI
Sbjct: 353 GNVEKARSVFDSLTEL-DIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISI 411
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
L A + + G Q + LI++ H + +IDL + + + + EE
Sbjct: 412 LLACNNAGLVEEGCQIFS-LIRNNHSIELTRDHY-TCMIDLLGR-AKRFEEATMLIEEGK 468
Query: 295 QPDLVLWNTMISG 307
PD++ W T+++
Sbjct: 469 NPDVIQWRTLLNA 481
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/618 (37%), Positives = 329/618 (53%), Gaps = 76/618 (12%)
Query: 132 FTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF--LDEAKRVF 187
TLS L T N NL ++ I GF + LL + + F LD + ++F
Sbjct: 27 ITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIF 86
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ E + WN+M+ AY Q +AL L++ MV +G D YT ++ A
Sbjct: 87 DRI-ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 145
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP------------- 294
GG + H H++K GF + ++ + LI++YA C G+MRD K+F+E P
Sbjct: 146 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVC-GNMRDARKLFDESPVLDSVSWNSILAG 204
Query: 295 ---------------------QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+ D+V W+ +ISGY Q Y ++AL F ++N G D
Sbjct: 205 YVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY-EEALVMFIEMNANGMRLD 263
Query: 334 DCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYS----KCGNLEDA 388
+ V V+SAC++LS GK IH L I++ I S +++ NAL+ MYS KCG +E+A
Sbjct: 264 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIES-YVNLQNALIHMYSDMYMKCGCVENA 322
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+F+ M E S N++I G A +G+ +L +F M + P ITF+ VL AC H
Sbjct: 323 LEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHM 382
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG------ 502
G V EG+ +F+ M + G EP +HY CM+DLLGRAG L +AE+LIE+MP P
Sbjct: 383 GLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGA 442
Query: 503 -----------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
+ + ++L+P + +V+L+NI+A+ G WE+V +R +M+ +GV
Sbjct: 443 LLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGV 502
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
K PG S IE +H F+A D +HP I ++ L EM++++K GY PD
Sbjct: 503 VKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDE 562
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
KE L HSEKLA+AFGLL+ S PI +MKNLRIC DCH A K IS REI VRD
Sbjct: 563 EEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRD 622
Query: 660 TYRFHCFKDGRCSCGDYW 677
+RFH FK+G CSC DYW
Sbjct: 623 RHRFHYFKEGACSCMDYW 640
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 20/355 (5%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V++ C R GK +H LK Y+ N I +Y+ CG + A F+++
Sbjct: 131 TYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDES 190
Query: 61 QHANVFSFNVLLAAYARQ---LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
+ S+N +LA Y ++ ++ A +LF+++ + D+VS++ LIS Y G E AL
Sbjct: 191 PVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALV 250
Query: 118 LFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCY 174
+F +M D + +++A + +L ++ K +H L I G + Y ++ N+L+ Y
Sbjct: 251 MFIEMNANGMRLDEVVVVSVLSACA-HLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMY 309
Query: 175 S----RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
S + G ++ A VF M E K SWN++++ + +L +F EM + + +
Sbjct: 310 SDMYMKCGCVENALEVFNGMEE-KGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPN 368
Query: 231 MYTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
T +L A + LV G F + + K G N ++DL + +G + + K
Sbjct: 369 EITFMGVLGACRHM-GLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR-AGLLNEAEK 426
Query: 289 VFEEIPQ-PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ E +P PD+ W ++ +++ D +G + PD F ++S
Sbjct: 427 LIESMPMAPDVATWGALLGAC---KKHGDTEMGERVGRKLIELQPDHDGFHVLLS 478
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/658 (35%), Positives = 335/658 (50%), Gaps = 68/658 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS- 142
A LF IP P N L+ ++ E+ LSL+ +R F D F+ L+ A S
Sbjct: 68 ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127
Query: 143 -NNLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+ L L ++H LA GF H + ++L+ Y+ G + +A+ +F +M +D V+WN
Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSH-RDVVTWN 186
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
M+ Y Q+ L+L++EM + D L ++L+A +L G H + +
Sbjct: 187 IMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDN 246
Query: 261 GFHQNSHIGSGLIDLYAKCS------------------------------GDMRDCMKVF 290
GF SHI + L+++YA C G ++D +F
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSD-QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
+ + + DLV W+ MISGY+ E Y +AL F ++ R PD + + VISAC+N+
Sbjct: 307 DRMVEKDLVCWSAMISGYA--ESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364
Query: 350 SL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
+ K IH K + +NNAL+ MY+KCGNL AR +F+ MP N +S +SMI
Sbjct: 365 LVQAKWIHTYADKNGF-GRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMIN 423
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
+A HG A+ LF M E NI P +TF+ VL AC+H G V EGQK+FS M +
Sbjct: 424 AFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRIS 483
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANH 511
P+ EHY CM+DL RA L A LIE MPF P G I L AA
Sbjct: 484 PQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATR 543
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L+LEP + V+L+NIYA +W++V +R+LM+ +GV K+ S IEV ++HVF+
Sbjct: 544 LLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMM 603
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGL 619
D H EI+ L+ + ++K GY P LV HSEKLA+ +GL
Sbjct: 604 ADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGL 663
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ I ++KNLRIC DCH+ +K +S + EI +RD RFH F G CSC DYW
Sbjct: 664 IGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 11/343 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C +L GK++H N +++ + +Y+ CG + A ++Q +
Sbjct: 223 VLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKH 282
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ +L+ YA+ + AR +FD++ + DLV ++ +IS YA+ AL LF +M+
Sbjct: 283 MVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQR 342
Query: 125 KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+R D T+ +I+A +N L+ K +H A GF +NN+L+ Y++ G L +
Sbjct: 343 RRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVK 402
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF M K+ +SW+SM+ A+ H + A+ LF M + + T +L A +
Sbjct: 403 AREVFENMPR-KNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACS 461
Query: 243 SLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ G +F + +I Q H G ++DLY + + +R M++ E +P P+++
Sbjct: 462 HAGLVEEGQKFFSSMINEHRISPQREHYGC-MVDLYCR-ANHLRKAMELIETMPFPPNVI 519
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+W +++S + + + LG F + PD + V+S
Sbjct: 520 IWGSLMSAC---QNHGEIELGEFAATRLLELEPDHDGALVVLS 559
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 85/223 (38%), Gaps = 52/223 (23%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C LV K +H KN + ++N I +Y+KCG L A F
Sbjct: 351 TMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENM 410
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV S ++++I+A+A GD +SA++LF
Sbjct: 411 PRKNVIS-------------------------------WSSMINAFAMHGDADSAIALFH 439
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS----------- 169
M+E+ + +G T G++ A S H + G ++S+ N
Sbjct: 440 RMKEQNIEPNGVTFIGVLYACS---------HAGLVEEGQKFFSSMINEHRISPQREHYG 490
Query: 170 -LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
++ Y R L +A + M + + W S++ A H E
Sbjct: 491 CMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGE 533
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/716 (31%), Positives = 381/716 (53%), Gaps = 64/716 (8%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFIL--LYSKCGCLSAAHHAFNQTQHANVFSF------- 68
G+ L AL L + +++ FI+ L + C L A +H + F
Sbjct: 9 GRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLE 68
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
LL YA+ + A+++F+ + DL +++++I+AYA G E A+ L++ M + +
Sbjct: 69 TALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVE 128
Query: 129 TDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T + + AS L + +H + + +SLL Y + + EA++V
Sbjct: 129 PNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKV 188
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLE 245
F M + ++ S+ +M+ AY Q E EAL+LF M ++ + + YT A+IL A L
Sbjct: 189 FEGM-KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 247
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+L G + H HL GF N + + L+ +Y KC G + KVF+ + +++ W +MI
Sbjct: 248 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKC-GSPVEARKVFDSMTARNVISWTSMI 306
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+ Y+Q +AL FK+++ P SF ++AC+ L G++IH ++ +
Sbjct: 307 AAYAQHGN-PQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANL 362
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S ++ +L++MY++CG+L+DARR+F+RM + S N+MIA + QHG +ALR++
Sbjct: 363 ASPQM--ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYR 420
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M + IP ITFVSVL AC+HT VA+ + + + G P EHY CM+D+LGR+
Sbjct: 421 KMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRS 480
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G+L DAE L+E MP+ ++A +AA +L P+ +PYV L+
Sbjct: 481 GRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLS 540
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA-------EDGSHPMIK 580
N+YAA+ ++++ +R+ M +RGV + S+IE+ ++H+F + E ++
Sbjct: 541 NMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTME 600
Query: 581 EIHNYLEEMSRKMKQAGYVPD----------------KEKRLVHHSEKLAVAFGLLSTSY 624
+ + L E+ MKQAGYVPD K++ L HSE+LA+A+GL++
Sbjct: 601 RVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKD 660
Query: 625 GE---PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ P+ V+ + R+C CH+AIK +S I + I VRD RFH F+ G CSCGD+W
Sbjct: 661 PDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 157/292 (53%), Gaps = 8/292 (2%)
Query: 210 REG--LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
REG L+AL+L+ EM + D + + S++ A T L+ L G + H HLI +GF +
Sbjct: 7 REGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIP 66
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + L+ +YAKC G + D +VFE + DL W+++I+ Y+ + + A+ ++++
Sbjct: 67 LETALLQMYAKC-GSLDDAKRVFEGMEIKDLFAWSSIIAAYA-RAGRGEMAVVLYRRMIA 124
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P+ +F C + C++++ + G+ IH + ++ + + + ++L+ MY KC +
Sbjct: 125 EGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDV-LQDSLLNMYLKCDEMV 183
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSAC 445
+AR++F+ M N S +MI+ Y Q G EAL LF M + I P TF ++L A
Sbjct: 184 EARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAV 243
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G + +G+K + GF+ + ++ + G+ G +A ++ ++M
Sbjct: 244 EGLGNLEKGRKVHRHLASR-GFDTNVVVQNALVTMYGKCGSPVEARKVFDSM 294
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/516 (38%), Positives = 309/516 (59%), Gaps = 38/516 (7%)
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D SW S++ Y Q+ EAL L M+ + + +T AS+L A + G Q
Sbjct: 4 RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
HA +K +H + ++GS L+D+YA+C G M + VF+++ + V WN +I+G+++K +
Sbjct: 64 HALTVKYDWHDDVYVGSALLDMYARC-GRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 122
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS-- 370
+ L F ++ R G+ ++ V SA + + GK +HA IK R+S
Sbjct: 123 -GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK---SGERLSAF 178
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N ++ MY+K G++ DAR++FD + + + V+ NSM+ +AQ+G+G EA+ FE M +
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ ITF+S+L+AC+H G V EG++YF MMK+ EPE +HY ++DLLGRAG L DA
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDA 297
Query: 491 ERLIEAMPFNP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
I MP P I AA+H +L+P + P V+L NIYA++
Sbjct: 298 LVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYAST 357
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
G+W+ A +R++M+ GV+K+P SW+E++ +H+FVA D +HP +EI+ EE+S ++
Sbjct: 358 GQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI 417
Query: 594 KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
++AGYVP +++ +L +HSEK+A+AF L++ G I +MKN+RICGDCH
Sbjct: 418 RKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCH 477
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+A ++IS + REI VRDT RFH F G CSCGDYW
Sbjct: 478 SAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 8/276 (2%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H +V+ + LL YAR R+ A +FDQ+ + VS+N LI+ +A GD E+ L +F +
Sbjct: 73 HDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAE 132
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ F+ FT S + +A + L K +H I G A V N++L Y+++G
Sbjct: 133 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 192
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A++VF + + KD V+WNSM+ A+ Q+ G EA+ F+EM + L+ T SILT
Sbjct: 193 MIDARKVFDHVDK-KDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 251
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
A + + G Q+ + + ++DL + +G + D + ++P +P
Sbjct: 252 ACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGR-AGLLNDALVFIFKMPMKPTA 310
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+W ++ + + +G F + PDD
Sbjct: 311 AVWGALLGSCRM---HKNAKIGQFAADHVFELDPDD 343
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H + + F N +L YA+ + AR++FD + + DLV++N++++A+A G
Sbjct: 167 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGRE 226
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ-------LHCLAIYCGFDHYASVN 167
A++ F++MR+ + T ++TA S+ L+K+ + + DHY +V
Sbjct: 227 AVTHFEEMRKCGVHLNQITFLSILTACSHG-GLVKEGKQYFDMMKEHNLEPEIDHYVTVV 285
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+ L R G L++A ++M W +++ + H+
Sbjct: 286 DLL----GRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHK 324
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 40/273 (14%)
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
M + S S+IAGYAQ+ + EAL L ML P TF S+L A + G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQ 514
++ ++ + + + S ++D+ R G++ A IA+ F Q
Sbjct: 61 EQIHALTVK-YDWHDDVYVGSALLDMYARCGRMDMA-------------IAV-----FDQ 101
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK-----------PGFSWIEVK 563
LE N V + L +A G E + M+ G + G +E
Sbjct: 102 LESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 161
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTS 623
K +H + + G + + N + +M K +G + D K H +K V + + T+
Sbjct: 162 KWVHAHMIKSGER-LSAFVGNTILDMYAK---SGSMIDARKVFDHVDKKDLVTWNSMLTA 217
Query: 624 YG------EPILVMKNLRICGDCHNAIKFISAI 650
+ E + + +R CG N I F+S +
Sbjct: 218 FAQYGLGREAVTHFEEMRKCGVHLNQITFLSIL 250
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/708 (35%), Positives = 358/708 (50%), Gaps = 71/708 (10%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C +L GK +H L L + L+N I +YSKCG
Sbjct: 167 LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG----------------- 209
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
++ AR LFD + D VS+N+LI+ Y G E L++ + M +
Sbjct: 210 --------------QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQN 255
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQ----LHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ +TL + A S+N K LH AI G V +LL Y++ G LD
Sbjct: 256 GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLD 315
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----GLEALQLFQEMVSLQLGLDMYTLAS 236
+A ++F +M + K+ V +N+M+ Q +AL LF EM S + M+T +S
Sbjct: 316 DAIQIFDQMVD-KNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSS 374
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L A +ED Q HA + K+G + +IGS LIDLY+ G M D + F I
Sbjct: 375 LLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYS-VLGSMMDALLCFNSIHNL 433
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+V MI GY Q E+ + AL F +L PD+ ++S+C+N+ G+QI
Sbjct: 434 TIVPMTAMIXGYLQNGEF-ESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQI 492
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
K+ I I N+ + MY+K G+L A F +M + VS ++MI AQHG
Sbjct: 493 QGHATKVGISRFTI-FQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGH 551
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
MEALR FE M I P + F+ VL AC+H G V EG +YF M+ + + +H
Sbjct: 552 AMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCV 611
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPS 518
C++DLLGRAG+L DAE LI + F + A + A ++LEP
Sbjct: 612 CVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPL 671
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ YV+L NIY +G + +R LM +R ++K+PG SWI++ +++ FV+ D SH
Sbjct: 672 ASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKN 731
Query: 579 IKEIHNYLEEM---SRKMKQA----GYVPDKE--KRLVHHSEKLAVAFGLLSTSYGEPIL 629
+I+ L+EM ++++ A GY + E + +HSEKLAVAFG+L S P+
Sbjct: 732 SGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVR 791
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
VMKNLRIC DCH +K S + RE+ VRD+ RFH FKDG CSCGDYW
Sbjct: 792 VMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 210/403 (52%), Gaps = 16/403 (3%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+F N LL Y + SA +LFD++ + ++V+YN+LIS Y + + + LF R
Sbjct: 94 LFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARR 153
Query: 125 KRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D +T +G +TA S NL K +H L + G + NSL+ YS+ G +D
Sbjct: 154 LGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDY 213
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A R+ ++ + D VSWNS++ Y Q+ + E L + Q+M L + YTL S L A +
Sbjct: 214 A-RILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACS 272
Query: 243 SLEDLVG----GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
S + G G H H IK G H + +G+ L+D+YAK +G + D +++F+++ ++
Sbjct: 273 S--NFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAK-TGSLDDAIQIFDQMVDKNV 329
Query: 299 VLWNTMISGYSQKEEYSD----QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
V++N M++G Q+E D +AL F ++ G P ++ ++ AC + K
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAK 389
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q+HAL K + S+ + + L+ +YS G++ DA F+ + V + +MI GY Q+
Sbjct: 390 QVHALMCKNGLLSDEY-IGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQN 448
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
G AL LF +L P +++S+CA+ G + G++
Sbjct: 449 GEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQ 491
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 136/255 (53%), Gaps = 15/255 (5%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G H+H+IK+ F + + L+++Y KC GD R K+F+++ + ++V +N++ISGY
Sbjct: 78 GKLVHSHMIKTSFRPCLFLQNNLLNMYCKC-GDTRSADKLFDKMSKSNIVTYNSLISGYV 136
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS---NLSPSLGKQIHALTIKIEIRS 366
Q D+ + F K R+G D + ++ACS NLS GK IH L + + S
Sbjct: 137 QMSNL-DKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSA--GKMIHGLILVYGLGS 193
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
++ + N+L+ MYSKCG ++ AR LFD + + VS NS+IAGY Q+G E L + + M
Sbjct: 194 -QVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKM 252
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKD---MFGFEPEGEHYSCMIDLLG 482
+ + T S L AC+ G K F +M+ D G + + ++D+
Sbjct: 253 HQNGLAFNTYTLGSALKACSSN---FNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYA 309
Query: 483 RAGKLTDAERLIEAM 497
+ G L DA ++ + M
Sbjct: 310 KTGSLDDAIQIFDQM 324
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C+ D K +HAL KN + Y+ + I LYS G + A FN
Sbjct: 371 TYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI 430
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + V +I Y G+ ESALSLF
Sbjct: 431 HNLTI-------------------------------VPMTAMIXGYLQNGEFESALSLFY 459
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ D F S ++++ +N L +Q+ A G + NS + Y+++G
Sbjct: 460 ELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSG 519
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L A F +M E D VSW++M+ + QH +EAL+ F+ M S + + + +L
Sbjct: 520 DLYAANLTFQQM-ENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVL 578
Query: 239 TA 240
A
Sbjct: 579 IA 580
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/655 (35%), Positives = 360/655 (54%), Gaps = 69/655 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +FD I +P+L+ +NT+ +A D SAL L+ M D +T L+ A
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + GFD V+ SL++ Y++NG L++A++VF
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 188 ----YEMGEI------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLD 230
G I KD VSWN+M+ Y + EAL+LF+EM+ + + D
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T+ ++++A + + G H+ + GF N I + LIDLY+K G++ ++F
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF-GEVETACELF 280
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ + D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 339
Query: 350 SLGKQIHA-LTIKIE-IRSNRISVNNALVAMYSKCGNLEDARRLFD-RMPEHNTVSLNSM 406
+G+ IH + K++ + +N S+ +L+ MY+KCG+++ A+++FD M + + N+M
Sbjct: 340 DIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAM 399
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G+A HG A +F M I P +ITFV +LSAC+H+G + G+ F M +
Sbjct: 400 ISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYE 459
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------A 509
P+ EHY CMIDLLG +G +AE +I MP P + LKA A
Sbjct: 460 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 519
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK-PGFSWIEVKKQMHV 568
+++EP N+ YV+L+NIYAA+G+W EVA IR L+ D+G++KK PG S IE+ +H
Sbjct: 520 KKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHE 579
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D HP +EI+ LEEM +++AG+VPD +E L HHSEKLA+A
Sbjct: 580 FIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIA 639
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
FGL+ST G + +MKNLR+C +CH A K IS I REI RD RF F+DG C
Sbjct: 640 FGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 38/280 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK+G H ++ S L++ + + + VF+ I +P+L++WNTM G++
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRI 369
+ AL + + +G PD +F ++ +C+ G+QIH +K+ + I
Sbjct: 67 SSD-PVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD-I 124
Query: 370 SVNNALVAMYSKCGNLEDAR-------------------------------RLFDRMPEH 398
V+ +L++MY++ G LEDAR +LFD +P
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS N+MI+GY + G EAL LF E M+ TN+ P T V+V+SACA + + G+
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S + D GF + + +IDL + G++ A L + +
Sbjct: 245 HSWIND-HGFASNLKIVNALIDLYSKFGEVETACELFDGL 283
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/566 (39%), Positives = 319/566 (56%), Gaps = 64/566 (11%)
Query: 160 FDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL-- 213
FD N N L++ Y +NG + EA++VF +M E ++ VSW +M+ Y Q EGL
Sbjct: 17 FDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPE-RNVVSWTAMIRGYVQ--EGLIE 73
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA LF M + L ++ ED G + L ++ + +I
Sbjct: 74 EAELLFWRMPERNVVSWTVMLGGLI------ED--GRVDEARQLFDMMPVKDVVASTNMI 125
Query: 274 DLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD------------QALG 320
D CS G + + ++F+E+PQ ++V W +MISG +S +AL
Sbjct: 126 D--GLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALA 183
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F + R G P S + V+S C +L S G+Q+H+ ++ + + I V++ L+ MY
Sbjct: 184 LFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDID-IYVSSVLITMY 242
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
KCG+L A+R+FDR + V NS+IAGYAQHG G +AL +F M ++I P ITF+
Sbjct: 243 IKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFI 302
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
VLSAC++TGKV EG + F MK + +P+ EHY+CM+DLLGRAGKL +A LIE MP
Sbjct: 303 GVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPV 362
Query: 500 NPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
+I A AA LQLEP+NA PY++L+N+Y++ +W++V +
Sbjct: 363 EADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVEL 422
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SHPMIKEIHNYLEEMSRKMKQAGYVPD 601
R+ MR + ++K PG SWIEV K++H+F SHP + I L ++ +++AGY PD
Sbjct: 423 RKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPD 482
Query: 602 --------KEKRLVH----HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
E+ VH HSEKLAVA+GLL G PI VMKNLR+CGD H+ IK I+
Sbjct: 483 GSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQ 542
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGD 675
+ GREI +RDT RFH FKDG CSC D
Sbjct: 543 VTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 32/380 (8%)
Query: 53 AHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
A F++ N S+N L++ Y + I+ AR++FD++P+ ++VS+ +I Y G
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
E A LF M E+ + L GLI + +QL + D AS N ++
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLGGLI--EDGRVDEARQLFDMMPVK--DVVASTN--MID 126
Query: 173 CYSRNGFLDEAKRVFYEM-------------GEIKDEVSWNSMVVAYGQHREGLEALQLF 219
G L EA+ +F EM GE KD+ +W++M+ Y + LEAL LF
Sbjct: 127 GLCSEGRLIEAREIFDEMPQRNVVAWTSMISGE-KDDGTWSTMIKIYERKGFELEALALF 185
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
M + ++ S+L+ SL L G Q H+ L++S F + ++ S LI +Y KC
Sbjct: 186 SLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKC 245
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
GD+ +VF+ D+V+WN++I+GY+Q + ++AL F + PD+ +F+
Sbjct: 246 -GDLVTAKRVFDRFSSKDIVMWNSIIAGYAQ-HGFGEKALEVFHDMFSSSIAPDEITFIG 303
Query: 340 VISACSNLSPSLGKQIHALTIKIEIRSN-----RISVNNALVAMYSKCGNLEDARRLFDR 394
V+SACS GK L I ++S + +V + + G L +A L +
Sbjct: 304 VLSACS----YTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN 359
Query: 395 MP-EHNTVSLNSMIAGYAQH 413
MP E + + +++ H
Sbjct: 360 MPVEADAIVWGALLGACRTH 379
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 61/330 (18%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAY--------ARQ 78
+N+V ++A + Y + G + A F + NV S+ V+L ARQ
Sbjct: 54 RNVVSWTAMIRG-----YVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQ 108
Query: 79 L-----------------------RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
L R+ AR++FD++PQ ++V++ ++IS D G +
Sbjct: 109 LFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTM 168
Query: 116 LSLFKDMREKRFDTDGFTLSGL------------------ITASSNNLCLIKQLHCLAIY 157
+ +++ K F+ + L L + S +L +Q+H +
Sbjct: 169 IKIYE---RKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVR 225
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
FD V++ L+T Y + G L AKRVF KD V WNS++ Y QH G +AL+
Sbjct: 226 SQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS-KDIVMWNSIIAGYAQHGFGEKALE 284
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLY 276
+F +M S + D T +L+A + + GL+ F + K + + ++DL
Sbjct: 285 VFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLL 344
Query: 277 AKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ +G + + M + E +P + D ++W ++
Sbjct: 345 GR-AGKLNEAMNLIENMPVEADAIVWGALL 373
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 43/211 (20%)
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI---- 431
+A Y + +AR+LFD+MPE NT+S N +++GY Q+G+ EA ++F+ M E N+
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 432 ----------------------PPTN-ITFVSVLSACAHTGKVAEGQKYFSMM--KDMFG 466
P N +++ +L G+V E ++ F MM KD+
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
+ MID L G+L +A + + MP + A + E + M+
Sbjct: 121 -------STNMIDGLCSEGRLIEAREIFDEMPQR----NVVAWTSMISGEKDDGTWSTMI 169
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
IY G E + LM+ GV +P F
Sbjct: 170 -KIYERKGFELEALALFSLMQREGV--RPSF 197
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 36/210 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C L G+ +H+ +++ Y+S+ I +Y KCG L A F++ +
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKD 262
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +N ++A YA+ A ++F + PD +++ ++SA + G + L +F+
Sbjct: 263 IVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFE 322
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M+ K + D T +HYA + + L R G L
Sbjct: 323 SMKSK-YQVDPKT---------------------------EHYACMVDLL----GRAGKL 350
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+EA + M D + W +++ A H+
Sbjct: 351 NEAMNLIENMPVEADAIVWGALLGACRTHK 380
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/635 (36%), Positives = 345/635 (54%), Gaps = 42/635 (6%)
Query: 78 QLRIASARQLFDQI-PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
+L + + QL Q+ P +V++ LIS G SAL F MR + + FT
Sbjct: 4 KLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPC 63
Query: 137 LITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
AS+ LCL KQ+H +A+ G + V S YS+ G EA+R+F EM
Sbjct: 64 AFKASTA-LCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPP- 121
Query: 194 KDEVSWNSMVV-AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ 252
++ WN+ + A R G +A+ F E + D+ T + L A L G Q
Sbjct: 122 RNVAVWNAYISNAVLDGRPG-KAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
H +I+SGF + + +G+ID+Y KC ++ VF + + + V W TM++ Q +
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCK-EVELAEMVFNGMGRRNSVSWCTMVAACEQND 239
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
E ++A F + G D VISA + +S G+ +HAL +K + + I V
Sbjct: 240 E-KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGD-IFV 297
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+ALV MY KCG++ED ++F MPE N VS N+MI+GYA G A+ LFE M ++
Sbjct: 298 GSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEA 356
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+T + VLSAC+ G V G + F M+D + EP EHY+C+ D+LGRAG + A
Sbjct: 357 VANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAY 416
Query: 492 RLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
++ MP P + AA++ +L+P ++ +V+L+N++AA+G
Sbjct: 417 EFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAG 476
Query: 535 KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
+W+E +R+ M+D G++K G SW+ K ++HVF A+D SH EI L ++ +M+
Sbjct: 477 RWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQ 536
Query: 595 QAGYVPD---------KEKRLV---HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHN 642
AGY+PD +E+++ +HSEK+A+AFGL++ G PI + KNLRICGDCH+
Sbjct: 537 AAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHS 596
Query: 643 AIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
A KFIS I GREI VRD RFH F+D +CSC D+W
Sbjct: 597 AFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 155/374 (41%), Gaps = 54/374 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C R L G+ LH L +++ ++N I +Y KC + A FN
Sbjct: 161 TFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM 220
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N VS+ T+++A + E A +F
Sbjct: 221 GRRNS-------------------------------VSWCTMVAACEQNDEKEKACVVFL 249
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R++ + + +S +I+A + + L + +H LA+ + V ++L+ Y + G
Sbjct: 250 MGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCG 309
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++ ++VF+EM E ++ VSWN+M+ Y + A+ LF+EM S + + TL +L
Sbjct: 310 SIEDCEQVFHEMPE-RNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVL 367
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------LIDLYAKCSGDMRDCMKVFEE 292
+A + GG + I I G + D+ + +G + + ++
Sbjct: 368 SACSR-----GGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGR-AGMVERAYEFVQK 421
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+P +P + +W +++ Y + LG N P D ++ SN+ +
Sbjct: 422 MPIRPTISVWGALLNAC---RVYGEPELGKIAADNLFKLDPKDSGNHVLL---SNMFAAA 475
Query: 352 GKQIHALTIKIEIR 365
G+ A ++ E++
Sbjct: 476 GRWDEATLVRKEMK 489
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MYSK A+ L P V+ ++I+G Q+G AL F M NI P + T
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC-MIDLLGRAGKLTDAERLIEA 496
F A G++ ++ + + + C D+ + G +A+RL +
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKL--GQINDKFVGCSAFDMYSKTGLKFEAQRLFDE 118
Query: 497 MPFNPGSIALKAA---NHFLQLEPSNAV 521
MP P ++A+ A N L P A+
Sbjct: 119 MP--PRNVAVWNAYISNAVLDGRPGKAI 144
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/739 (31%), Positives = 367/739 (49%), Gaps = 96/739 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G +H +K ++ N I Y +CG
Sbjct: 141 TFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECG------------ 188
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I R++FD++ + ++VS+ +LI YA G + A+SLF
Sbjct: 189 -------------------EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFF 229
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M E + T+ G+I+A + +L L +Q+ + A + N+L+ Y + G
Sbjct: 230 EMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCG 289
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+++F E + K+ V +N+++ Y + E L + EM+ D T+ S +
Sbjct: 290 AIDKARKIFDECVD-KNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAV 348
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC------------------- 279
+A + L+D+ G H +++++G ++ + +I++Y KC
Sbjct: 349 SACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRV 408
Query: 280 -----------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+GDM K+F +P DLV WNTMI Q+ + +A+ F+ +
Sbjct: 409 SWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFK-EAIELFRVMQSE 467
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G D + V V SAC L L K IH K +I + + + ALV M+++CG+ +
Sbjct: 468 GITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFD-MHLGTALVDMFARCGDPQS 526
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A ++F++M + + + + I A G G A+ LF+ ML+ I P + FV++L+A +H
Sbjct: 527 AMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSH 586
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG----- 502
G V +G F MKD++G P+ HY CM+DLLGRAG L++A LI +M P
Sbjct: 587 GGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWG 646
Query: 503 ------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
IA AA +L+P +V+L+NIYA++G+W++VA +R ++++G
Sbjct: 647 SLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKG 706
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
K PG S IE+ ++ F D SHP + I L+E+ +++ GYVPD
Sbjct: 707 AHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVN 766
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE L HSEKLA+AF L+ST G PI V KNLRIC DCH+ K +S REI VR
Sbjct: 767 EKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVR 826
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFH F+ G CSCGDYW
Sbjct: 827 DNNRFHFFQQGFCSCGDYW 845
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 209/439 (47%), Gaps = 51/439 (11%)
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAI 156
+++LI ++ CG A+ +F+ + D FT +++A + + L + Q+H +
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
GF+ V NSL+ Y G +D +RVF +M E ++ VSW S++ Y + EA+
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSE-RNVVSWTSLIGGYAKRGCYKEAV 225
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
LF EMV + + + T+ +++A L+DL G Q + + N+ + + L+D+Y
Sbjct: 226 SLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMY 285
Query: 277 AKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
KC G + K+F+E +LVL+NT++S Y ++ + + L ++ + G PD +
Sbjct: 286 MKC-GAIDKARKIFDECVDKNLVLYNTIMSNYV-RQGLAREVLAVLGEMLKHGPRPDRIT 343
Query: 337 FVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
+ +SACS L S GK H ++ + +V NA++ MY KCG E A R+FDRM
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWD-NVCNAIINMYMKCGKQEMACRVFDRM 402
Query: 396 PEHNTVSLNSMIAGYAQHG-----------------------IGM--------EALRLFE 424
VS NS+IAG+ ++G IG EA+ LF
Sbjct: 403 LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFR 462
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE-HY-----SCMI 478
M I +T V V SAC + G + + K + G+ + + H+ + ++
Sbjct: 463 VMQSEGITADKVTMVGVASACGYLGAL-------DLAKWIHGYIKKKDIHFDMHLGTALV 515
Query: 479 DLLGRAGKLTDAERLIEAM 497
D+ R G A ++ M
Sbjct: 516 DMFARCGDPQSAMQVFNKM 534
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 172/317 (54%), Gaps = 13/317 (4%)
Query: 148 IKQLHCLAIYCGFDHYA-SVNNSLLTCYSRNGF-----LDEAKRVFYE-MGEIKDEVSWN 200
+KQLH G +H+ S+ N + +C F +A +F E G + ++
Sbjct: 49 LKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFS 108
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
S++ + G +A+ +F++++ + D +T +L+A T L G Q H ++K
Sbjct: 109 SLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKM 168
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF ++ + + LI Y +C G++ DCM+ VF+++ + ++V W ++I GY+++ Y +A+
Sbjct: 169 GFERDMFVENSLIHFYGEC-GEI-DCMRRVFDKMSERNVVSWTSLIGGYAKRGCYK-EAV 225
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ VG P+ + V VISAC+ L LG+Q+ ++E+ N + VN ALV M
Sbjct: 226 SLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVN-ALVDM 284
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KCG ++ AR++FD + N V N++++ Y + G+ E L + ML+ P IT
Sbjct: 285 YMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITM 344
Query: 439 VSVLSACAHTGKVAEGQ 455
+S +SAC+ V+ G+
Sbjct: 345 LSAVSACSELDDVSCGK 361
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 27/260 (10%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE--EIPQPDLVLW-------- 301
Q H+ + K+G + H L +L + C+ M FE E Q L L+
Sbjct: 51 QLHSQITKNGLN---HHPLSLTNLISSCTE-----MGTFESLEYAQKALELFIEDNGIMG 102
Query: 302 -----NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+++I G+S +A+ F++L +G PD+ +F V+SAC+ + + G Q+
Sbjct: 103 THYMFSSLIRGFSACG-LGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQV 161
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K+ + + V N+L+ Y +CG ++ RR+FD+M E N VS S+I GYA+ G
Sbjct: 162 HGAIVKMGFERD-MFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGC 220
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA+ LF M+E I P ++T V V+SACA + G++ + + ++ E +
Sbjct: 221 YKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGEL-ELEVNALMVN 279
Query: 476 CMIDLLGRAGKLTDAERLIE 495
++D+ + G + A ++ +
Sbjct: 280 ALVDMYMKCGAIDKARKIFD 299
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/643 (34%), Positives = 339/643 (52%), Gaps = 58/643 (9%)
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE-KRFDTDGFTLSGLITASSNN 144
++F + ++VS+ L+ + GD L L +MR + +TLS AS
Sbjct: 13 EVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLS----ASLKA 68
Query: 145 LCLIKQ------LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
C++ +H L + G+ + V +SL+ YS+ G + +A+RVF G +
Sbjct: 69 CCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIAT 128
Query: 199 WNSMVVAYGQHREGLEALQLFQEMV--SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
WN+MV Y G +AL +F+EM Q D +T AS+L A + L G Q HA
Sbjct: 129 WNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAA 188
Query: 257 LIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+ SGF N+ + L+D+Y KC + M+VFE + + +++ W ++ G++Q+ +
Sbjct: 189 MTASGFSTASNAILAGALVDMYVKCR-RLPVAMQVFERLERKNVIQWTAVVVGHAQEGQV 247
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNN 373
+ +AL F++ R G PD V+ ++ + G+Q+H IK ++ +S N
Sbjct: 248 T-EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD-VSAGN 305
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
++V MY KCG ++A R+F M N VS +M+ G +HG+G EA+ LFE M + P
Sbjct: 306 SIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEP 365
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+T++++LSAC+H G V E ++YFS ++ P+ EHY+CM+DLLGRAG+L +A L
Sbjct: 366 DEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDL 425
Query: 494 IEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
I MP P ++ +A + L ++ N V YV L+N+ A +G+W
Sbjct: 426 IRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEW 485
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV---AEDGSHPMIKEIHNYLEEMSRKM 593
E +R MR RG++K+ G SW+EV K++H F E+ +HP +I L +M +M
Sbjct: 486 RECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRM 545
Query: 594 K-QAGYVPDKEKRLVH-------------HSEKLAVAFGLLST-----SYGEPILVMKNL 634
+ Q GY D + +H HSE+LAV LL +GEPI V KNL
Sbjct: 546 REQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNL 605
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R+CGDCH K +SA+ R + VRD RFH F+ G CSC DYW
Sbjct: 606 RVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 10/261 (3%)
Query: 52 AAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
AA A + +N L+ Y + R+ A Q+F+++ + +++ + ++ +A G
Sbjct: 187 AAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQ 246
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNN 168
AL LF+ D LS ++ + + L+ +Q+HC I S N
Sbjct: 247 VTEALELFRRFWRSGARPDSHVLSSVVGVLA-DFALVEQGRQVHCYGIKDPTGTDVSAGN 305
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
S++ Y + G DEA+R+F EM + VSW +MV G+H G EA+ LF+EM + +
Sbjct: 306 SIVDMYLKCGLPDEAERMFREM-RAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVE 364
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDC 286
D T ++L+A S LV + + I+ + + ++DL + +G++R+
Sbjct: 365 PDEVTYLALLSA-CSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGR-AGELREA 422
Query: 287 MKVFEEIP-QPDLVLWNTMIS 306
+ +P +P + +W T++S
Sbjct: 423 RDLIRTMPMEPTVGVWQTLLS 443
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF-EWMLETNIPPTNI 436
MY KCG L+ A +F M + N VS +++ G+ +HG LRL E + P
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
T + L AC G A G + G++ S ++ + + G++ DA R+ +
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRA-GYQEHDVVASSLVLVYSKGGRIGDARRVFDG 119
Query: 497 MPFNPG 502
G
Sbjct: 120 AGLGSG 125
>gi|218185582|gb|EEC68009.1| hypothetical protein OsI_35805 [Oryza sativa Indica Group]
Length = 392
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/411 (48%), Positives = 255/411 (62%), Gaps = 57/411 (13%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D +TLAS+L+AF + +DL G++ H LIKS F H+ SGL+DL AKC G ++D K
Sbjct: 9 DTFTLASVLSAFAASKDLDVGMELHGRLIKSNFAHYPHVASGLVDLNAKC-GSIQDARKA 67
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS- 348
F E+ +P LVLWN +I GYS +E S+ AL CF+ + R G +PDDCSFVC+ISACS+ S
Sbjct: 68 FNEVHKPGLVLWNMLIFGYSLHDEVSEDALLCFRAMQRAGLYPDDCSFVCIISACSDTSS 127
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
P G+Q+HAL + +A+ LFDRM E NTV NS+IA
Sbjct: 128 PLQGQQLHAL--------------------------VAEAKMLFDRMTEKNTVPYNSIIA 161
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G AQHG +EALRLF+ ML ++ PT ITF+SVLSACAHT KV E +YF MK +G E
Sbjct: 162 GLAQHGHAVEALRLFKDMLSSDYEPTGITFISVLSACAHTRKVGECWEYFYSMKHKYGIE 221
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANH 511
P EHYSCM+D+L RA +AE L + MPFN SI +AA
Sbjct: 222 PCEEHYSCMVDVLARAKNFENAEELTKEMPFNLSSIGWTSLLSACGTHGNMDLGARAAKE 281
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L L P +A +V+L+NIYA KWEE A IR+L+R+RG++KKPG SWIE+ + +H+FVA
Sbjct: 282 ILNLTPYSASTHVVLSNIYATVDKWEEAAQIRKLLRNRGIRKKPGCSWIELGRIVHIFVA 341
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHS 610
D SH IK+++ +LE MS KMK AGYVPD+ E RL HHS
Sbjct: 342 NDVSHRRIKDVYKFLEVMSEKMKLAGYVPDERWALAKDHAAEGETRLRHHS 392
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 42/328 (12%)
Query: 122 MREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + F TD FTL+ +++A +S +L + +LH I F HY V + L+ ++ G
Sbjct: 1 MSRQGFTTDTFTLASVLSAFAASKDLDVGMELHGRLIKSNFAHYPHVASGLVDLNAKCGS 60
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASIL 238
+ +A++ F E+ + V WN ++ Y H E E AL F+ M L D + I+
Sbjct: 61 IQDARKAFNEVHK-PGLVLWNMLIFGYSLHDEVSEDALLCFRAMQRAGLYPDDCSFVCII 119
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + + G Q HA + ++ +F+ + + +
Sbjct: 120 SACSDTSSPLQGQQLHALVAEAKM--------------------------LFDRMTEKNT 153
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP--SLGKQIH 356
V +N++I+G +Q ++ +AL FK + Y P +F+ V+SAC++ + +
Sbjct: 154 VPYNSIIAGLAQ-HGHAVEALRLFKDMLSSDYEPTGITFISVLSACAHTRKVGECWEYFY 212
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH-NTVSLNSMIAGYAQHG- 414
++ K I + +V + ++ N E+A L MP + +++ S+++ HG
Sbjct: 213 SMKHKYGIEPCEEHY-SCMVDVLARAKNFENAEELTKEMPFNLSSIGWTSLLSACGTHGN 271
Query: 415 ------IGMEALRLFEWMLETNIPPTNI 436
E L L + T++ +NI
Sbjct: 272 MDLGARAAKEILNLTPYSASTHVVLSNI 299
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 100/261 (38%), Gaps = 55/261 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +DL G LH +K+ ++++ + L +KCG + A AFN+
Sbjct: 12 TLASVLSAFAASKDLDVGMELHGRLIKSNFAHYPHVASGLVDLNAKCGSIQDARKAFNEV 71
Query: 61 QHANVFSFNVLLAAYA-------------------------------------------- 76
+ +N+L+ Y+
Sbjct: 72 HKPGLVLWNMLIFGYSLHDEVSEDALLCFRAMQRAGLYPDDCSFVCIISACSDTSSPLQG 131
Query: 77 RQLR--IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
+QL +A A+ LFD++ + + V YN++I+ A G AL LFKDM ++ G T
Sbjct: 132 QQLHALVAEAKMLFDRMTEKNTVPYNSIIAGLAQHGHAVEALRLFKDMLSSDYEPTGITF 191
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVN------NSLLTCYSRNGFLDEAKRVFY 188
+++A ++ K C + H + + ++ +R + A+ +
Sbjct: 192 ISVLSACAHTR---KVGECWEYFYSMKHKYGIEPCEEHYSCMVDVLARAKNFENAEELTK 248
Query: 189 EMGEIKDEVSWNSMVVAYGQH 209
EM + W S++ A G H
Sbjct: 249 EMPFNLSSIGWTSLLSACGTH 269
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/680 (33%), Positives = 363/680 (53%), Gaps = 69/680 (10%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+V+ L+ Y + +A++LF+++P ++VS+ +L+ Y+D G+ L++++ M
Sbjct: 408 GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 467
Query: 123 REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R++ + T + + ++ + L Q+ I GF+ SV NSL++ +S +
Sbjct: 468 RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSV 527
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+EA VF M E D +SWN+M+ AY H E+L+ F M L + TL+S+L+
Sbjct: 528 EEACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSV 586
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-------------------- 280
+S+++L G H ++K G N I + L+ LY++
Sbjct: 587 CSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISW 646
Query: 281 ----------GDMRDCMKVFEEIPQ---PDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
G D +K+ E+ Q PD V WN +I G+++ EE ++A+ +K +
Sbjct: 647 NSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEE-PNEAVKAYKLIRE 705
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P + + ++A +NL+ G+Q+H L IK+ S+ + V NA + MY KCG +
Sbjct: 706 KGI-PANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESD-LHVTNAAMDMYGKCGEMH 763
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
D ++ + + +S N +I+ +A+HG +A F ML+ P ++TFVS+LSAC
Sbjct: 764 DVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACN 823
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
H G V EG Y+ M FG P EH C+IDLLGR+G+L+ AE I+ MP P +A
Sbjct: 824 HGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAW 883
Query: 507 -----------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
K A H L+L+PS+ YV+ +N+ A SGKWE+V +R+ M
Sbjct: 884 RSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSN 943
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
++K+P SW+++K ++H F + HP I L E+ + K+AGYVPD
Sbjct: 944 NIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDM 1003
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
KE L +HSE+LA+AFGL++T + + KNLR+CGDCH+ KF+S I GR+I +
Sbjct: 1004 DEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVL 1063
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD YRFH F G+CSCGDYW
Sbjct: 1064 RDPYRFHHFSGGKCSCGDYW 1083
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 155/681 (22%), Positives = 286/681 (41%), Gaps = 136/681 (19%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ ++L+ C+ ++ G +H + N +L+ I+ Y K G + AA + F+
Sbjct: 33 YLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP 92
Query: 62 HANVFSFNVLLAAYARQLR-------------------------------IASARQLFDQ 90
+V S+ +++ Y++ R + A LF
Sbjct: 93 ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGT 152
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLI 148
+ + D+VS+N +I YA G + + +F+ M D +TL ++ AS+ L +
Sbjct: 153 MMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIA 212
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL---------------------------- 180
Q+H + G+ Y V L+ Y++NG L
Sbjct: 213 NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 272
Query: 181 -------------------DEAKRVFYEMGEIKDEVSWNSMVVAYGQH------------ 209
++AKR F EM E K+ +SW S++ Y +H
Sbjct: 273 GIYTMGNALIDMYAKSGEIEDAKRAFDEMEE-KNVISWTSLISGYAKHGYGHMAHARYVF 331
Query: 210 -------------------REGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
R GL EA+ LF +M L + + + +AS++TA + +
Sbjct: 332 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 391
Query: 249 G-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q H ++K+G + ++G+ L+ Y G + + K+FEE+P ++V W +++ G
Sbjct: 392 DEGFQVHGFVVKTGILGDVYVGTALVHFYGSI-GLVYNAQKLFEEMPDHNVVSWTSLMVG 450
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRS 366
YS + L ++++ + G + +F V S+C L LG Q+ I+
Sbjct: 451 YSDSGN-PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE- 508
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ +SV N+L++M+S ++E+A +FD M E + +S N+MI+ YA HG+ E+LR F WM
Sbjct: 509 DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 568
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ + T S+LS C+ + G+ ++ + G + + ++ L AG+
Sbjct: 569 RHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKL-GLDSNVCICNTLLTLYSEAGR 627
Query: 487 LTDAERLIEAMP--------------FNPGSI--ALKAANHFLQLEPSNAVPYVMLANIY 530
DAE + +AM G LK LQ+ + V + L +
Sbjct: 628 SEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGH 687
Query: 531 AASGKWEEVATIRRLMRDRGV 551
A + + E +L+R++G+
Sbjct: 688 AENEEPNEAVKAYKLIREKGI 708
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 12/301 (3%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
+L G+ +H L +K + + + N + LYS+ G A F ++ S+N ++A
Sbjct: 592 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 651
Query: 74 AYARQLRIASARQLFD---QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
Y + + ++ Q+ +PD V++N LI +A+ + A+ +K +REK +
Sbjct: 652 CYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 711
Query: 131 GFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
T+ L A++ NL ++ +QLH L I GF+ V N+ + Y + G + + ++
Sbjct: 712 YITMVSL--AATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 769
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
+ + +SWN ++ A+ +H +A + F EM+ L D T S+L+A +
Sbjct: 770 PQPIN-RSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLV 828
Query: 248 VGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
GL ++ + + G +IDL + SG + +E+P P+ + W +++
Sbjct: 829 DEGLAYYDSMTREFGVFPGIEHCVCIIDLLGR-SGRLSHAEGFIKEMPVPPNDLAWRSLL 887
Query: 306 S 306
+
Sbjct: 888 A 888
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 37/291 (12%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G IH I S+ + +N L+ Y K G++ AR +FD MPE + VS +M++GY+
Sbjct: 49 GHLIHTHLITNGFGSD-LHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYS 107
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD-------- 463
Q+G +A LF M + N V S C GK+ + F M +
Sbjct: 108 QNGRFEKAFVLFSDMRHCGV-KANHALVDFHSKC---GKMEDASYLFGTMMERDVVSWNA 163
Query: 464 -MFGFEPEG--EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANH----FLQLE 516
+ G+ +G + CM + R G + D L + + L AN QL
Sbjct: 164 MIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLG 223
Query: 517 -PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
S + +L N YA +G +R +G+ KK FS + +
Sbjct: 224 YGSYDIVTGLLINAYAKNGSLRSAKDLR-----KGMLKKDLFS--------STALITGYA 270
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
H I + N L +M K +G + D ++ EK +++ L + Y +
Sbjct: 271 HEGIYTMGNALIDMYAK---SGEIEDAKRAFDEMEEKNVISWTSLISGYAK 318
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ LH L +K +++N + +Y KCG + Q + + S+N+L++A
Sbjct: 727 LEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISA 786
Query: 75 YARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
+AR AR+ F ++ P+PD V++ +L+SA G + L+ + M +
Sbjct: 787 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE----- 841
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
++ G +H + + L R+G L A+ EM
Sbjct: 842 -----------------------FGVFPGIEHCVCIIDLL----GRSGRLSHAEGFIKEM 874
Query: 191 GEIKDEVSWNSMVVA 205
++++W S++ A
Sbjct: 875 PVPPNDLAWRSLLAA 889
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/588 (36%), Positives = 324/588 (55%), Gaps = 37/588 (6%)
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NGFL 180
+ + DT L+ + N+L + Q+ AI + + V + C +
Sbjct: 20 KHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSM 79
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ +F M E D V +NSM Y + LE LF E++ + D YT S+L A
Sbjct: 80 SYARHLFEAMSE-PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L G Q H +K G N ++ LI++Y +C D+ VF+ I +P +V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE-DVDSARCVFDRIVEPCVVC 197
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
+N MI+GY+++ ++AL F+++ P++ + + V+S+C+ L S LGK IH
Sbjct: 198 YNAMITGYARRNR-PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K + VN AL+ M++KCG+L+DA +F++M +T + ++MI YA HG ++
Sbjct: 257 KKHSF-CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ +FE M N+ P ITF+ +L+AC+HTG+V EG+KYFS M FG P +HY M+D
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LL RAG L DA I+ +P +P +A K + +L+ S+
Sbjct: 376 LLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGD 435
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA + KWE V ++R++M+DR K PG S IEV +H F + DG ++
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKL 495
Query: 583 HNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
H L+EM +++K +GYVPD KE L +HSEKLA+ FGLL+T G I
Sbjct: 496 HRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIR 555
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCHNA K IS I GR++ +RD RFH F+DG+CSCGD+W
Sbjct: 556 VVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 12/365 (3%)
Query: 41 ILLYSKCGCLSAAHH--AFNQTQHANVFSFNVLLAAYARQLRIAS----ARQLFDQIPQP 94
ILL SKC L A+ H SF L + + S AR LF+ + +P
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLH 152
D+V +N++ Y+ + SLF ++ E D +T L+ A + L +QLH
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
CL++ G D V +L+ Y+ +D A+ VF + E V +N+M+ Y +
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE-PCVVCYNAMITGYARRNRP 211
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL LF+EM L + TL S+L++ L L G H + K F + + + L
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID++AKC G + D + +FE++ D W+ MI Y+ + +++++ F+++ P
Sbjct: 272 IDMFAKC-GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK-AEKSMLMFERMRSENVQP 329
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D+ +F+ +++ACS+ G++ + + I ++V + S+ GNLEDA
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 392 FDRMP 396
D++P
Sbjct: 390 IDKLP 394
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 154/314 (49%), Gaps = 39/314 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ LH L +K + + Y+ I +Y++C
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE------------ 178
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR +FD+I +P +V YN +I+ YA ALSLF+
Sbjct: 179 -------------------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ K + TL ++++ + +L L K +H A F Y VN +L+ +++ G
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A +F +M KD +W++M+VAY H + +++ +F+ M S + D T +L
Sbjct: 280 SLDDAVSIFEKM-RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 239 TAFTSLEDLVGGLQFHAHLI-KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + G ++ + ++ K G + H GS ++DL ++ +G++ D + +++P
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS-MVDLLSR-AGNLEDAYEFIDKLPIS 396
Query: 296 PDLVLWNTMISGYS 309
P +LW +++ S
Sbjct: 397 PTPMLWRILLAACS 410
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 341/612 (55%), Gaps = 38/612 (6%)
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS-GLITASSNNLCLI-KQLH--CL 154
+NT + A ALSL+ M + FT L + ++ +L ++ Q H
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE-MGEIKDEVSWNSMVVAYGQHREGL 213
+ C F+ + V L++ Y + +D A++VF E K V +N++V Y + +
Sbjct: 77 KVGCVFEPF--VQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA+ LF++M + ++ TL ++ A S +L G H +K GF + + + I
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+Y KC G + K+F+E+P L+ WN M+SGY+Q + L ++ ++ G HPD
Sbjct: 195 TMYMKC-GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNG-LATNVLELYRNMDMNGVHPD 252
Query: 334 DCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ V V+S+C+NL + S+G ++ I+ ++ +NNAL+ MY++CGNL A+ +F
Sbjct: 253 PVTLVGVLSSCANLGAQSVGHEVE-FKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
D MPE VS ++I GY HG G A++LF+ M+ + I P FV VLSAC+H G
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------- 503
+G +YF MMK + EP EHYSCM+DLLGRAG+L +A+ LIE+MP P
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431
Query: 504 --------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+A A ++LEP N YV+L+NIY+ + + V IR +M+++ ++K P
Sbjct: 432 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEK----------R 605
G S++E+K ++H F+ D +H EI+ LEE+ + Q P+K+ R
Sbjct: 492 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGFTR 551
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
+ HSEKLAVAFGLL+T+ G ++++KNLRIC DCH K +S I R++TVRD RFH
Sbjct: 552 VGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHH 611
Query: 666 FKDGRCSCGDYW 677
F++G CSC DYW
Sbjct: 612 FRNGSCSCKDYW 623
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 204/451 (45%), Gaps = 46/451 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF LK+C + G H K F ++ I +Y K + A F +
Sbjct: 51 TFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEEN 110
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H+ R+L V YN L+S Y A+ LF+
Sbjct: 111 FHS-------------RKLT----------------VCYNALVSGYVSNSKCSEAVLLFR 141
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E+ + TL GLI A S NL L LHC + GFD SV N +T Y + G
Sbjct: 142 QMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCG 201
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+++F EM +K +SWN+MV Y Q+ L+L++ M + D TL +L
Sbjct: 202 SVNYAQKLFDEM-PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVL 260
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ +L G + + SGF N + + LI++YA+C G++ VF+ +P+ L
Sbjct: 261 SSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARC-GNLTKAQAVFDGMPERTL 319
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V W +I GY + + A+ FK++ R G PD +FVCV+SACS+ G L
Sbjct: 320 VSWTAIIGGYGM-HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSH----AGLTDQGL 374
Query: 359 T-IKIEIRSNRISVN----NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
K+ R+ ++ + +V + + G L++A+ L + MP ++ + G +
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 414 GIGMEALRL-FEWMLETNIPPTNITFVSVLS 443
+E L FE ++E + P NI + +LS
Sbjct: 435 HKNVELAELAFERVIE--LEPENIGYYVLLS 463
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 349/648 (53%), Gaps = 50/648 (7%)
Query: 66 FSFNVLLAAYA--RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
F + LLA Y+ + + AR +FD+I + L+ +NT+I Y + + + LF ++
Sbjct: 46 FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV 105
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + D FTL +I + L ++ KQ+H LA+ GF V SL+ YS+ G +
Sbjct: 106 HE-YLPDNFTLPCVIKGCAR-LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEI 163
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D A++VF M + KD V WNS++ Y + E ALQLF+EM D ++ ++
Sbjct: 164 DCARKVFDGMID-KDVVLWNSLIDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDG 218
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ G ++ L +N + +I+ Y K SGD +++F ++P DLV
Sbjct: 219 LSK----CGKVESARKLFDQMPCRNLVSWNAMINGYMK-SGDFDSALELFYQMPIWDLVT 273
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WN MI+GY ++ D A+ F + ++G P + V V+SA S L+ G+ IH+
Sbjct: 274 WNLMIAGYELNGQFMD-AVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYM 332
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K + I + +L+ MY+KCG +E A +F + + ++I G HG+ A
Sbjct: 333 EKNGFELDGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHA 391
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF M +T + P I F+ VL+AC H G V +G++YF MM + + EP EHY C++D
Sbjct: 392 LALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVD 451
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
+L RAG L +A+ IE MP +P I AA +++ P
Sbjct: 452 ILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGC 511
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
Y++L+N+YAASG WE+V+ +R +M RG +K PG S +E K +H F+ D SHP KEI
Sbjct: 512 YILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEI 571
Query: 583 HNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
+ + EM K+K G+VPD KE L +HSE+LA+AFGL++ G PI
Sbjct: 572 YAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIR 631
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLR+C DCH+ K +S I REI VRD RFH FK+G CSC DYW
Sbjct: 632 IMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 188/416 (45%), Gaps = 42/416 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+K C + GK +H L LK ++ + +YSKCG + A F+
Sbjct: 114 TLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM 173
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V +N L+ YAR I A QLF+++P+ D S+ L+ + CG ESA LF
Sbjct: 174 IDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFD 233
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M + + N+++ Y ++G
Sbjct: 234 QMPCRNLVS-------------------------------------WNAMINGYMKSGDF 256
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D A +FY+M I D V+WN M+ Y + + ++A+++F M+ L TL S+L+A
Sbjct: 257 DSALELFYQM-PIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 315
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L L G H+++ K+GF + +G+ LI++YAKC G + + VF I + +
Sbjct: 316 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKC-GCIESALTVFRAIQKKKVGH 374
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALT 359
W +I G ++ AL F ++ + G P+ F+ V++AC++ G+Q +
Sbjct: 375 WTAIIVGLGI-HGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMM 433
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG 414
+ + LV + + G+LE+A+ + MP N V S++ G HG
Sbjct: 434 MNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 18/252 (7%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HA +K+ + + S L+ LY+ D+ +F+ I + L+ WNT+I Y +
Sbjct: 31 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRI 369
++S + F +L Y PD+ + CVI C+ L GKQIH L +KI S+ +
Sbjct: 91 N-QFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD-V 147
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V +LV MYSKCG ++ AR++FD M + + V NS+I GYA+ G AL+LFE M E
Sbjct: 148 FVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER 207
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + V LS C GKV +K F M +++ ++ MI+ ++G
Sbjct: 208 DAFSWTV-LVDGLSKC---GKVESARKLFDQMPCRNLVS-------WNAMINGYMKSGDF 256
Query: 488 TDAERLIEAMPF 499
A L MP
Sbjct: 257 DSALELFYQMPI 268
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/707 (32%), Positives = 364/707 (51%), Gaps = 70/707 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G DL GK +H ++ + N I +Y KCG
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG------------ 245
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR LFD++P+ D++S+N +IS Y + G L LF
Sbjct: 246 -------------------DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFF 286
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR D D TL+ +I+A + L + +H I GF SV NSL Y G
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG 346
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA+++F M E KD VSW +M+ Y + +A+ ++ M + D T+A++L
Sbjct: 347 SWREAEKLFSRM-ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A +L DL G++ H IK+ + + LI++Y+KC + + +F IP+ ++
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC-IDKALDIFHNIPRKNV 464
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+ W ++I+G + + F + ++ P+ + ++AC+ + + GK+IHA
Sbjct: 465 ISWTSIIAGLRLNNRCFEALI--FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHA 522
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NAL+ MY +CG + A F+ + + S N ++ GY++ G G
Sbjct: 523 HVLRTGVGLDDF-LPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGS 580
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ LF+ M+++ + P ITF+S+L C+ + V +G YFS M+D +G P +HY+C+
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACV 639
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+DLLGRAG+L +A + I+ MP P A A H +L+ +
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA GKW EVA +RR+M++ G+ G SW+EVK ++H F+++D HP K
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTK 759
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ LE KM + G +++ HSE+ A+AFGL++T G PI
Sbjct: 760 EINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPI 819
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KNL +C +CH+ +KFIS REI+VRD FH FKDG CSCGD
Sbjct: 820 WVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 210/441 (47%), Gaps = 49/441 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +++ C +R G ++++ L ++ L N F+ ++ + G L A + F +
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
N+FS+NVL+ YA+Q A L+ ++ +PD+ ++ ++ CG
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRT---CGGIP-- 210
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+L K++H + G++ V N+L+T Y
Sbjct: 211 ----------------------------DLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + A+ +F M +D +SWN+M+ Y ++ E L+LF M L + D+ TL
Sbjct: 243 KCGDVKSARLLFDRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+++A L D G HA++I +GF + + + L +Y +G R+ K+F + +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLN-AGSWREAEKLFSRMER 360
Query: 296 PDLVLWNTMISGYSQKEEYS---DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D+V W TMISGY EY+ D+A+ ++ +++ PD+ + V+SAC+ L
Sbjct: 361 KDIVSWTTMISGY----EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G ++H L IK + S I NN L+ MYSKC ++ A +F +P N +S S+IAG
Sbjct: 417 GVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 412 QHGIGMEALRLFEWMLETNIP 432
+ EAL M T P
Sbjct: 476 LNNRCFEALIFLRQMKMTLQP 496
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 8/287 (2%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA++L M L++ +D +++ G + ++ + S +G+ +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHP 332
++ + G++ D VF ++ + +L WN ++ GY+ K+ Y D+A+ + ++ VG P
Sbjct: 137 AMFVR-FGNLVDAWYVFGKMSERNLFSWNVLVGGYA-KQGYFDEAMCLYHRMLWVGGVKP 194
Query: 333 DDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D +F CV+ C + P L GK++H ++ + I V NAL+ MY KCG+++ AR
Sbjct: 195 DVYTFPCVLRTCGGI-PDLARGKEVHVHVVRYGYELD-IDVVNALITMYVKCGDVKSARL 252
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
LFDRMP + +S N+MI+GY ++G+ E L LF M ++ P +T SV+SAC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G+ + + GF + + + + AG +AE+L M
Sbjct: 313 RRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 309/557 (55%), Gaps = 65/557 (11%)
Query: 183 AKRVFYEMGEIKDEV-SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+++F + + K E WNS + A + ++A+ LF + + D +T +S+L A
Sbjct: 79 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+L DL G H + K GF N ++ + ++ LYA C G+M + +FE++PQ D+V W
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASC-GEMGEARLLFEKMPQRDVVTW 197
Query: 302 N-------------------------------TMISGYSQKEEYSDQALGCFKKLNRVGY 330
N +MI+GY Q + + +A+ F K+ G
Sbjct: 198 NIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGK-AKEAIHLFAKMEEAGV 256
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
++ + V V++AC++L LG +IH + + + N + ++N L+ MY KCG LE+A
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRN-VRISNTLIDMYVKCGCLEEAC 315
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
++F+ M E VS ++MI G A HG EALRLF M + I P +TF+ +L AC+H G
Sbjct: 316 KVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMG 375
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI----- 504
++EG+++F+ M +G P+ EHY CM+DLL RAG L +A I MP P +
Sbjct: 376 LISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGAL 435
Query: 505 ------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
A +A H L+L+P N YV+L+NIYA +G+WE+ A +R+ M+DR V+
Sbjct: 436 LGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVK 495
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------ 600
K PG+S I V +H FVA + SHP ++I EE+ +M+ GYVP
Sbjct: 496 KTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEG 555
Query: 601 DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+K K + HSEKLA+ FGL++T PI +MKNLRIC DCH+A K ISAI REI VRD
Sbjct: 556 EKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDR 615
Query: 661 YRFHCFKDGRCSCGDYW 677
RFHCF D CSC DYW
Sbjct: 616 NRFHCFNDNSCSCRDYW 632
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 156/312 (50%), Gaps = 8/312 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C+ DL G+ LH + K + YL N + LY+ CG + A F +
Sbjct: 130 TCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKM 189
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V ++N+++A +Q A LF ++P+ ++ S+ ++I+ Y CG + A+ LF
Sbjct: 190 PQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFA 249
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E + T+ ++ A ++ L L ++H + GF ++N+L+ Y + G
Sbjct: 250 KMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCG 309
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+EA +VF EM E + VSW++M+ H EAL+LF +M + + + T +L
Sbjct: 310 CLEEACKVFEEMEE-RTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLL 368
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + + G +F A + + Q H G ++DL ++ +G + + + +P +
Sbjct: 369 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC-MVDLLSR-AGLLHEAHEFILNMPMK 426
Query: 296 PDLVLWNTMISG 307
P+ V+W ++
Sbjct: 427 PNGVVWGALLGA 438
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 332/573 (57%), Gaps = 37/573 (6%)
Query: 137 LITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
L+ +S+ + ++K QLH + G V N+L+ YS++ +++R F E K
Sbjct: 21 LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF-EDSPQK 79
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+W+S++ + Q+ +L+ ++M++ L D + L S + L G H
Sbjct: 80 SATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVH 139
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+K+G+ + +GS L+D+YAKC G++ K+F+E+P ++V W+ M+ GY+Q E
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKC-GEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGE- 197
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+++AL FK+ +D SF VIS C+N + LG+QI L IK S+ V +
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSF-VGS 256
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+LV++YSKCG+LE A ++FD +P N N+M+ AQH + + LF+ M + + P
Sbjct: 257 SLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKP 316
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
ITF++VL+AC+H G V EG+ YF +MK+ EP +HY+ ++D+LGRAGKL +A +
Sbjct: 317 NFITFLNVLNACSHAGLVDEGKYYFDLMKES-RIEPTDKHYASLVDMLGRAGKLEEALEI 375
Query: 494 IEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
+ MP +P +A AA+ +L P ++ ++ L+N YAA G++
Sbjct: 376 VTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
E+ A R+L+RDRG +K+ G SW+E + ++H F A + H KEI+ L E+ +M++A
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKA 495
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GYV D K + + +HSE+LA+AFGL++ PI VMKNLR+CGDCHNAI
Sbjct: 496 GYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAI 555
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KF+S R I VRD RFH F+DG+CSC DYW
Sbjct: 556 KFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 145/270 (53%), Gaps = 10/270 (3%)
Query: 43 LYSKCGCLSAAHHAFNQTQH-ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNT 101
+ S+C + H +T + A+VF + L+ YA+ I AR++FD++P ++V+++
Sbjct: 128 ILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSG 187
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCG 159
++ YA G+ E AL LFK+ + + ++ S +I+ +N+ L L +Q+ L I
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSS 247
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
FD + V +SL++ YS+ G L+ A +VF E+ +++ WN+M+ A QH + ++LF
Sbjct: 248 FDSSSFVGSSLVSLYSKCGDLEGAYQVFDEV-PMRNLGIWNAMLKACAQHSHTQKVIELF 306
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ--NSHIGSGLIDLYA 277
+ M + + T ++L A S LV +++ L+K + + H S L+D+
Sbjct: 307 KRMKLSGMKPNFITFLNVLNA-CSHAGLVDEGKYYFDLMKESRIEPTDKHYAS-LVDMLG 364
Query: 278 KCSGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
+ +G + + +++ +P P +W +++
Sbjct: 365 R-AGKLEEALEIVTNMPIDPTESVWGALLT 393
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F V+ C L G+ + L +K+ S+++ + + LYSKCG L A+ F++
Sbjct: 219 SFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEV 278
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N +L A A+ +LF ++ +P+ +++ +++A + G +
Sbjct: 279 PMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGK 338
Query: 117 SLFKDMREKRFD-TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F M+E R + TD HYAS+ + L
Sbjct: 339 YYFDLMKESRIEPTD------------------------------KHYASLVDML----G 364
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G L+EA + M E W +++ + H+
Sbjct: 365 RAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHK 399
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/712 (32%), Positives = 372/712 (52%), Gaps = 80/712 (11%)
Query: 3 RQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
R++ +C + + + S+ A Y NL+P A F++
Sbjct: 37 RKLFDSC-DSKSISSWNSMVAGYFANLMP-------------------RDARKLFDEMPD 76
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+ S+N L++ Y + I AR++FD +P+ ++VS+ L+ Y G + A SLF M
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 123 REKRFDTDGFTLSGLITASS-NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
EK + L G + ++ C + ++ D S++ + G +D
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP-------DKDNIARTSMIHGLCKEGRVD 189
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+ +F EM E + ++W +MV YGQ+ +A ++F M + S+L +
Sbjct: 190 EAREIFDEMSE-RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGY 244
Query: 242 TS---LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ED F +K N+ I SGL G++ +VF+ + + +
Sbjct: 245 VQNGRIED--AEELFEVMPVKPVIACNAMI-SGLGQ-----KGEIAKARRVFDSMKERND 296
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
W T+I + ++ + +AL F + + G P + + ++S C++L+ SL GKQ+H
Sbjct: 297 ASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA-SLHHGKQVH 354
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A ++ + + + V + L+ MY KCG L ++ +FDR P + + NS+I+GYA HG+G
Sbjct: 355 AQLVRCQFDVD-VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 417 MEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EAL++F E L + P +TFV+ LSAC++ G V EG K + M+ +FG +P HY+
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPS 518
CM+D+LGRAG+ +A +I++M P + +A A +++EP
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GSHP 577
N+ Y++L+N+YA+ G+W +VA +R+LM+ R V+K PG SW EV+ ++H F SHP
Sbjct: 534 NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP 593
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+ I L+E+ +++AGY PD K L +HSE+LAVA+ LL S G
Sbjct: 594 EQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEG 653
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCH AIK IS + REI +RD RFH F++G CSC DYW
Sbjct: 654 IPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +HA ++ Y+++ + +Y KCG L + F++
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-----QPDLVSYNTLISAYADCGDTESA 115
++ +N +++ YA A ++F ++P +P+ V++ +SA + G E
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 116 LSLFKDM 122
L +++ M
Sbjct: 453 LKIYESM 459
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 226/704 (32%), Positives = 379/704 (53%), Gaps = 47/704 (6%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA---------NVF 66
+ G+ + AL L + + +N + L+ + C ++ HA +V+
Sbjct: 89 LNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVY 148
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
N L+A + R +++ A ++FD++ + D +++N++I+ + G AL F +++
Sbjct: 149 VANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDAN 208
Query: 127 FDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
D +L ++ AS L+ K++H A+ D + N+L+ YS+ + A
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAG 268
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
VF +M KD +SW +++ AY Q+ EAL+L +++ + + +D + S L A + L
Sbjct: 269 LVFDKMIN-KDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGL 327
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L + H + +K G + + + +ID+YA C G++ ++FE I D+V W +M
Sbjct: 328 RCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADC-GNINYATRMFESIKCKDVVSWTSM 385
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
IS Y +++ALG F + PD + V ++SA ++LS + GK+IH +
Sbjct: 386 ISCYVHNG-LANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKG 444
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+VN +LV MY+ CG+LE+A ++F + V +MI Y HG G A+ LF
Sbjct: 445 FMLEGSTVN-SLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELF 503
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
M + + P +ITF+++L AC+H+G + EG++ MK + EP EHY+C++DLLGR
Sbjct: 504 SIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGR 563
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
A L +A +++M P + + AA L L+P + YV++
Sbjct: 564 ANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLI 623
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
+N++AASG+W++V +R M+ G++K PG SWIEV ++H F+ D SHP +I+ L
Sbjct: 624 SNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKL 683
Query: 587 EEMSRKM-KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
+++ K+ K+ GYVP +K + L HSE+LA+A+GL+STS G PI + KN
Sbjct: 684 AQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKN 743
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+C DCH K +S RE+ VRD RFH F+DG CSCGD+W
Sbjct: 744 LRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 261/556 (46%), Gaps = 65/556 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C D+ G +H L +K +++N + +Y+KC + A F++
Sbjct: 12 TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71
Query: 61 QHAN-VFSFNVLLAAYARQLRIASARQLFDQIPQPDL-VSYNTLISAYADCGDTESALSL 118
N V S+N +++AY+ + A LF ++ + + + TL++A C D+
Sbjct: 72 NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSS----- 126
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
F G + I S+ L D Y V N+L+ + R G
Sbjct: 127 --------FKKLGMEIHAAILKSNQVL---------------DVY--VANALVAMHVRFG 161
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A R+F E+ E KD ++WNSM+ + Q+ EALQ F + L D +L SIL
Sbjct: 162 KMSYAARIFDELDE-KDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISIL 220
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK----VFEEIP 294
A L L+ G + HA+ +K+ N IG+ LID+Y+KC C+ VF+++
Sbjct: 221 AASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCC-----CVAYAGLVFDKMI 275
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
DL+ W T+I+ Y+Q ++ +AL +K+ G D + ACS L S K
Sbjct: 276 NKDLISWTTVIAAYAQNNCHT-EALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAK 334
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
++H T+K + + + + N ++ +Y+ CGN+ A R+F+ + + VS SMI+ Y +
Sbjct: 335 EVHGYTLKRGL--SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHN 392
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G+ EAL +F M ET++ P +IT VS+LSA A + +G++ + GF EG
Sbjct: 393 GLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRK-GFMLEGST 451
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ ++D+ G L +A ++ F+ + V + + N Y
Sbjct: 452 VNSLVDMYACCGSLENAYKV------------------FICTRSKSLVLWTTMINAYGMH 493
Query: 534 GKWEEVATIRRLMRDR 549
G+ + + +M D+
Sbjct: 494 GRGKAAVELFSIMEDQ 509
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 207/411 (50%), Gaps = 38/411 (9%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
++H L I CG+D V NSL++ Y++ + A+++F M E D VSWNS++ AY +
Sbjct: 31 EIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLN 90
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ +EAL LF+EM +G + YTL + L A +S + L G++ HA ++KS + +
Sbjct: 91 GQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL--GMEIHAAILKSNQVLDVY 148
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + L+ ++ + G M ++F+E+ + D + WN+MI+G++Q Y ++AL F L
Sbjct: 149 VANALVAMHVR-FGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLY-NEALQFFCGLQD 206
Query: 328 VGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
PD+ S + +++A L L GK+IHA +K + SN + + N L+ MYSKC +
Sbjct: 207 ANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN-LRIGNTLIDMYSKCCCVA 265
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A +FD+M + +S ++IA YAQ+ EAL+L + + + S L AC+
Sbjct: 266 YAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACS 325
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM-----IDLLGRAGKLTDAERLIEAMPFNP 501
G + S K++ G+ + M ID+ G + A R+ E+
Sbjct: 326 -------GLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFES----- 373
Query: 502 GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
++ + V + + + Y +G E + LM++ V+
Sbjct: 374 -------------IKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE 411
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 136/240 (56%), Gaps = 11/240 (4%)
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M L + D +T +L A +ED+ G + H +IK G+ + + L+ +YAKC+
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCN- 59
Query: 282 DMRDCMKVFEEI-PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
D+ K+F+ + + D+V WN++IS YS + +ALG F+++ + G + + V
Sbjct: 60 DILGARKLFDRMNERNDVVSWNSIISAYSLNGQ-CMEALGLFREMQKAGVGANTYTLVAA 118
Query: 341 ISACSNLS-PSLGKQIHALTIKIEIRSNR---ISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ AC + S LG +IHA +K SN+ + V NALVAM+ + G + A R+FD +
Sbjct: 119 LQACEDSSFKKLGMEIHAAILK----SNQVLDVYVANALVAMHVRFGKMSYAARIFDELD 174
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
E + ++ NSMIAG+ Q+G+ EAL+ F + + N+ P ++ +S+L+A G + G++
Sbjct: 175 EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/660 (34%), Positives = 334/660 (50%), Gaps = 103/660 (15%)
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
SL+ +R F D L + + L + LH A+ G V +SLL Y R
Sbjct: 6 SLYHFLRHVSFPPDPHLLPSALKSCPAQP-LARALHAAAVVSGLAEDPFVASSLLHSYIR 64
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS------------ 224
G A+ VF M E K+ V W++++ Y + A L ++M S
Sbjct: 65 LGATGAARSVFDRMPE-KNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 225 LQLGL-----------------------DMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
L GL D ++ L+A ++++ G Q H +++K+G
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD----- 316
++ + + LID+Y KC G + ++VF E D+ N +++G S+ + S+
Sbjct: 184 CRLDACVVTALIDMYGKC-GRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242
Query: 317 -----------------------------QALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+A+ F+ + +G P+ + CV+ A +N+
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANV 302
Query: 348 SPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + G+ H +++ + + V +ALV MY+KCG AR +FD MP N VS N+M
Sbjct: 303 AALMHGRSAHCFSLRKGFLHD-VYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAM 361
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I GYA HG A++LF M + P +TF VL AC+ G EG++YF+ M+ G
Sbjct: 362 IGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHG 421
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
P EHY+CM+ LLGR+GKL +A LI MPF P S +A AA
Sbjct: 422 ISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAA 481
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
QLEP NA YV+L+NIYA+ W+ V +R M++ G++K+ G SWIE+K ++H+
Sbjct: 482 EKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHML 541
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
+A D SHPM+ I L +++ +M + G+ P +K+ L HSEKLAVA
Sbjct: 542 LAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVAL 601
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST G P+ V+KNLRICGDCH A+KFIS+ REI+VRDT RFH FKDG+CSCGDYW
Sbjct: 602 GLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 142/301 (47%), Gaps = 10/301 (3%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
+++ GK +H +K A + I +Y KCG F+++ H +V S N L+
Sbjct: 167 KEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALV 226
Query: 73 AAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
A +R +++ A LF + + ++VS+ ++++ G A+ LF+ M+ +
Sbjct: 227 AGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVE 286
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T+ ++ A +N L+ + HC ++ GF H V ++L+ Y++ G A+ +
Sbjct: 287 PNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTI 346
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M ++ VSWN+M+ Y H + A+QLF M + D+ T +L A +
Sbjct: 347 FDAMPS-RNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGL 405
Query: 247 LVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
G ++ + + G + ++ L + SG + + + E+P +PD +W ++
Sbjct: 406 TEEGRRYFNEMQQGHGISPRMEHYACMVTLLGR-SGKLDEAYDLINEMPFEPDSCIWGSL 464
Query: 305 I 305
+
Sbjct: 465 L 465
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/548 (37%), Positives = 311/548 (56%), Gaps = 33/548 (6%)
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
GF+ + N +L + + G + +A+R+F EM E ++ VSWN+++ + +EA +L
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPE-RNLVSWNTIISGLVDVGDFMEAFRL 63
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F M +T A ++ A LE + G Q HA +K G + + LID+Y+K
Sbjct: 64 FLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSK 123
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G + D VFEE+P+ V WNT+I+GY+ YS++AL + ++ G D +F
Sbjct: 124 C-GSIEDARFVFEEMPEKTTVGWNTIIAGYAL-HGYSEEALDMYYEMRDSGVKMDHFTFS 181
Query: 339 CVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
++ C+ L S KQ HA I+ S+ I N ALV YSK G +EDAR +FD+M
Sbjct: 182 MIVRICARLASVEHAKQAHAALIRHGFGSD-IVANTALVDFYSKWGRIEDARHVFDKMAS 240
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
N +S N++I GY HG G EA+ LFE M++ + P +ITF++VLSAC+H+G G +
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------------- 503
F M +P HY+CMI+L+GR G L +A LI PF P +
Sbjct: 301 FQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNE 360
Query: 504 ---IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+ AA +EP Y++L NIY ++G +E A + ++ +G++ +P SWI
Sbjct: 361 NFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWI 420
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK-----------EKRLVHH 609
EVK++ HVF++ D HP KEI+ ++++ ++ + GYVP++ E+ ++H
Sbjct: 421 EVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLYH 480
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEKLA+AFGL+ST Y P+ +++ RICGDCH AIK I+ + GREI +RD RFH FK G
Sbjct: 481 SEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHG 540
Query: 670 RCSCGDYW 677
CSC DYW
Sbjct: 541 HCSCEDYW 548
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 53/373 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +++ G + G+ LHA LK + ++S I +YSKCG
Sbjct: 78 TFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGS----------- 126
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I AR +F+++P+ V +NT+I+ YA G +E AL ++
Sbjct: 127 --------------------IEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYY 166
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR+ D FT S + I A ++ KQ H I GF N +L+ YS+ G
Sbjct: 167 EMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWG 226
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+ VF +M K+ +SWN+++ YG H G EA++LF++M+ ++ + T ++L
Sbjct: 227 RIEDARHVFDKMAS-KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVL 285
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG------SGLIDLYAKCSGDMRDCMKVFEE 292
+A + GL I +++ I + +I+L + G + + + +
Sbjct: 286 SACSH-----SGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGR-EGLLDEALALIRG 339
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
P +P +W +++ E + LG F G PD + V+ N + +L
Sbjct: 340 APFKPTANMWAALLTACRVNENFE---LGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNL 396
Query: 352 GKQ---IHALTIK 361
+ +H L K
Sbjct: 397 KEAADVVHTLKRK 409
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/714 (33%), Positives = 373/714 (52%), Gaps = 78/714 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K+ G L GK +HA+ +K Y+ N I LY K GC A++
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC------AWD-- 183
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++F+++P+ D+VS+N++IS Y GD S+L LFK
Sbjct: 184 -----------------------AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHY-ASVNNSLLTCYSRN 177
+M + F D F+ + A S+ + K++HC A+ + V S+L YS+
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLA 235
G + A+R+F M + ++ V+WN M+ Y ++ +A FQ+M S Q GL D+ T
Sbjct: 281 GEVSYAERIFNGMIQ-RNIVAWNVMIGCYARNGRVTDAFLCFQKM-SEQNGLQPDVITSI 338
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L A LE G H + ++ GF + + + LID+Y +C G ++ +F+ + +
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC-GQLKSAEVIFDRMAE 393
Query: 296 PDLVLWNTMISGYSQK-EEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSLGK 353
+++ WN++I+ Y Q + YS AL F++L PD + ++ A +LS S G+
Sbjct: 394 KNVISWNSIIAAYVQNGKNYS--ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IHA +K SN I + N+LV MY+ CG+LEDAR+ F+ + + VS NS+I YA H
Sbjct: 452 EIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G ++ LF M+ + + P TF S+L+AC+ +G V EG +YF MK +G +P EH
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y CM+DL+GR G + A+R +E MPF P +IA AA ++E
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
N YV+L N+YA +G+WE+V I+ LM +G+ + S +E K + HVF D SH
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Query: 577 PMIKEIHNYLEEMSR-------------KMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTS 623
+I+ L+ +SR +++ V + HS +LA FGL+ST
Sbjct: 691 VATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTE 750
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V N RIC CH ++ S + REI V D+ FH F +GRCSCG+YW
Sbjct: 751 TGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 210/404 (51%), Gaps = 11/404 (2%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+ T+ N + L +A + A QLFD++ + D +N +I + CG A+
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 117 SLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ M D FT +I A ++L K++H + I GF V NSL++ Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G +A++VF EM E +D VSWNSM+ Y +G +L LF+EM+ D ++
Sbjct: 176 MKLGCAWDAEKVFEEMPE-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFST 234
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S L A + + G + H H ++S + + + ++D+Y+K G++ ++F +
Sbjct: 235 MSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK-YGEVSYAERIFNGM 293
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLG 352
Q ++V WN MI Y++ +D L CF+K++ + G PD + + ++ A + L G
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFL-CFQKMSEQNGLQPDVITSINLLPASAILE---G 349
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH ++ + + + AL+ MY +CG L+ A +FDRM E N +S NS+IA Y Q
Sbjct: 350 RTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+G AL LF+ + ++++ P + T S+L A A + ++EG++
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 186/341 (54%), Gaps = 20/341 (5%)
Query: 166 VNNSLLT----CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
VN+ LT ++ + +++A ++F EM + D WN M+ + +EA+Q +
Sbjct: 62 VNDPALTRALRGFADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
MV + D +T ++ + + L G + HA +IK GF + ++ + LI LY K G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL-G 179
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGY-SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
D KVFEE+P+ D+V WN+MISGY + + +S +L FK++ + G+ PD S +
Sbjct: 180 CAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS--SLMLFKEMLKCGFKPDRFSTMSA 237
Query: 341 ISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+ ACS++ SP +GK+IH ++ I + + V +++ MYSK G + A R+F+ M + N
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKY- 457
V+ N MI YA++G +A F+ M E N + P IT +++L A A + EG+
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIH 353
Query: 458 -FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++M + GF P + +ID+ G G+L AE + + M
Sbjct: 354 GYAMRR---GFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EDA +LFD M + + N MI G+ G+ +EA++ + M+ + T+ V+ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
A + EG+K +M+ + GF + + +I L + G DAE++ E MP
Sbjct: 140 VAGISSLEEGKKIHAMVIKL-GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 354/644 (54%), Gaps = 75/644 (11%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ AY + + AR++FD++P +V++N++I++Y G ++ A+ +++ M
Sbjct: 115 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 174
Query: 129 TDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFD-HYASVNNSLLTCYSRNGFLDEAK 184
D FT S + A S+ L L+ ++ H ++ G V ++L+ Y++ G + +A+
Sbjct: 175 PDEFTFSSVFKAFSD-LGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 233
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
V ++ KD V + +++V Y H E E+LQ+F+ M + + YTL+S+L +L
Sbjct: 234 LVSDQVVG-KDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNL 292
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
EDL G H ++K+G V W ++
Sbjct: 293 EDLTSGRLIHGLIVKAGLES---------------------------------AVTWTSV 319
Query: 305 ISGYSQ--KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
I G Q +EE AL F+++ R P+ + V+ ACS+L+ GKQIHA+ +K
Sbjct: 320 IVGLVQNGREEI---ALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMK 376
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ ++ V AL+ Y KCG+ E AR +F+ + E + VS+NSMI YAQ+G G EAL+
Sbjct: 377 FGLDIDKY-VGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQ 435
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF M +T + P N+T++ VLSAC + G + EG FS ++ E +HY+CM+DLL
Sbjct: 436 LFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLL 495
Query: 482 GRAGKLTDAERLIEAMPFNPGSI----------------ALKAANHFLQLEPSNAVPYVM 525
GRAG+L +AE LI + + I A + N + L P + +V+
Sbjct: 496 GRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVL 555
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L+N+YA++G W +V ++ MR+ ++K P SW++V++++H F+A D SHP ++I
Sbjct: 556 LSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREK 615
Query: 586 LEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY-GEPILVMK 632
LEE+ K+K+ GYVPD K + L +HSEKLAVAF L ++Y I ++K
Sbjct: 616 LEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILK 675
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
NLR+CGDCH +KF+S I GR+I RD RFH F++G CSCGDY
Sbjct: 676 NLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 192/409 (46%), Gaps = 47/409 (11%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+NVF + L+ YA+ ++ AR + DQ+ D+V + LI Y+ G+ +L +F++M
Sbjct: 211 SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM 270
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+K + + +TLS ++ N +L + +H L + G +
Sbjct: 271 TKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE------------------- 311
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
V+W S++V Q+ AL F++M+ + + +TL+S+L A
Sbjct: 312 --------------SAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRA 357
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+SL L G Q HA ++K G + ++G+ LID Y KC G VF + + D+V
Sbjct: 358 CSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC-GSTEIARSVFNGLLEVDVVS 416
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTI 360
N+MI Y+Q + +AL F + G P++ +++ V+SAC+N + L + H +
Sbjct: 417 VNSMIYSYAQN-GFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN-AGLLEEGCHIFSS 474
Query: 361 -----KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
IE+ + + +V + + G L++A L +++ + V ++++ HG
Sbjct: 475 ARNSGNIELTKDHYA---CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGD 531
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
A R+ +++ P T V + + A TG ++ + S M++M
Sbjct: 532 VEMAKRVMNRVIDL-APEDGGTHVLLSNLYASTGNWSKVIEMKSAMREM 579
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
S+ N L+ Y KCG++ AR++FD +P + V+ NSMIA Y ++G EA+ +++ M+
Sbjct: 112 SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 171
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY-SCMIDLLGRAGKLT 488
I P TF SV A + G V EGQ+ + G S ++D+ + GK+
Sbjct: 172 GILPDEFTFSSVFKAFSDLGLVHEGQRAHG-QSVVLGVGVSNVFVGSALVDMYAKFGKMR 230
Query: 489 DAERLI 494
DA RL+
Sbjct: 231 DA-RLV 235
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 37/229 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C L GK +HA+ +K + Y+ I Y KCG A FN
Sbjct: 350 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 409
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
+V S N ++ +YA+ A QLF D +P+ V++ ++SA + G E
Sbjct: 410 LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC 469
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+F R +S N+ L K DHYA + + L R
Sbjct: 470 HIFSSAR-----------------NSGNIELTK-----------DHYACMVDLL----GR 497
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
G L EA+ + ++ I D V W +++ A H + A ++ ++ L
Sbjct: 498 AGRLKEAEMLINQV-NISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDL 545
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 231/717 (32%), Positives = 368/717 (51%), Gaps = 77/717 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C TG+++H L K+ A + N + +Y+KCG L+ A AF +
Sbjct: 172 TLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEA 231
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
P +VS+N ++ AY + +A L +
Sbjct: 232 ---------------------------------PSVVSWNVMLGAYTRNREAGAAFGLLR 258
Query: 121 DMREKRFDT---DGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCY 174
DM+ K + D T+ ++ A S L +++LH + G D + V N+L+ Y
Sbjct: 259 DMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAY 318
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYT 233
R G L A RVF ++ K SWN+++ A+ Q A++LF +M + L D ++
Sbjct: 319 GRCGRLLHADRVFTDI-RRKTVSSWNTLISAHAQQNTA-AAIELFIQMTNACGLKPDGFS 376
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ S+L A + L+ H ++++G +++ I + L+ Y +CS +F+ +
Sbjct: 377 IGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAM 436
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSP-SL 351
+ VLW MISGYSQ ++L F+++ V G+ S + ACS LS L
Sbjct: 437 EEKGEVLWIAMISGYSQNG-LPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRL 495
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT-VSLNSMIAGY 410
GK++H +K ++ + ++++L+ MYSKCG +EDAR FDR+ + VS +MI GY
Sbjct: 496 GKEMHCFALKADLCDDPF-LSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGY 554
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF-GFEP 469
A +G+G EA+ L+ M + P T++ +L AC H G + EG ++F M++ E
Sbjct: 555 AVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEV 614
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHF 512
+ EHYSC+I +L RAG+ DA L+ MP P + L + A
Sbjct: 615 KLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERL 674
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
L+LEP A YV+ +N+YA S +W+++ +R+++RD G+ K+PG SWI+V +++ FVA
Sbjct: 675 LELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAG 734
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLL 620
+ HP ++++ + ++++ GYVPD L HSEK AV FGLL
Sbjct: 735 ENPHPEMEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLL 794
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T+ + V KN+R+C DCHNA + IS + GR+I VRD RFH F+ G CSCGDYW
Sbjct: 795 RTATPATVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE----VSWNSMVV 204
+Q+H LA G V NSL++ Y R G +++A++VF G I D VSWN+++
Sbjct: 88 RQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVF---GGIPDAARNIVSWNALMA 144
Query: 205 AY-GQHREGLEALQLFQE-MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
A G R GLE LF++ +V++ +D TL ++L +L G H KSG+
Sbjct: 145 ALSGDPRRGLE---LFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGW 201
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCF 322
+ +G+ L+D+YAKC G++ D + F E P +V WN M+ Y++ E + A G
Sbjct: 202 DAPARVGNALVDMYAKC-GELADAERAFPE--APSVVSWNVMLGAYTRNRE-AGAAFGLL 257
Query: 323 K--KLNRVGYHP-DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ ++ G P D+ + + V+ ACS + S +++HA T++ + + V NALVA
Sbjct: 258 RDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAA 317
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET-NIPPTNIT 437
Y +CG L A R+F + S N++I+ +AQ A+ LF M + P +
Sbjct: 318 YGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTA-AAIELFIQMTNACGLKPDGFS 376
Query: 438 FVSVLSACA 446
S+L ACA
Sbjct: 377 IGSLLMACA 385
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNL---SPSLGKQIH 356
WN +++ +S+ ++D L G PD + +C L + + G+Q+H
Sbjct: 32 WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE--HNTVSLNSMIAGYAQHG 414
AL K+ + + V N+LV+MY +CG +EDA ++F +P+ N VS N+++A A G
Sbjct: 92 ALAAKLGLPGDPF-VGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA--ALSG 148
Query: 415 IGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
L LF + ++ T V+VL CA G G+ + G++
Sbjct: 149 DPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKS-GWDAPARV 207
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++D+ + G+L DAER P
Sbjct: 208 GNALVDMYAKCGELADAERAFPEAP 232
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/609 (35%), Positives = 342/609 (56%), Gaps = 31/609 (5%)
Query: 43 LYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD 95
L+ C LSA HA +++ L YA+ R+A A+++ +P+
Sbjct: 288 LFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCS 347
Query: 96 LVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHC 153
L SYN +I YA AL F+ + + D TLSG + A ++ + +Q+H
Sbjct: 348 LQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHG 407
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
LA+ V N++L Y + L EA +F +M E +D VSWN+++ A Q+
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLF-DMMERRDAVSWNAIIAACEQNGNEE 466
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
E L F M+ ++ D +T S+L A + L G++ H +IKSG +S +G+ L+
Sbjct: 467 ETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALV 526
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
D+Y KC G + K+ + Q +V WN +ISG+S ++ S+ A F ++ +G +PD
Sbjct: 527 DMYCKC-GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQ-SEDAHKFFSRMLEMGVNPD 584
Query: 334 DCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ ++ V+ C+NL+ LGKQIHA IK E++S+ + + + LV MYSKCGN++D++ +F
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSD-VYICSTLVDMYSKCGNMQDSQLMF 643
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
++ P + V+ N+M+ GYA HG+G EAL+LFE M N+ P + TFVSVL ACAH G V
Sbjct: 644 EKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVD 703
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------- 503
+G YF +M +G +P+ EHYSCM+D+LGR+G++ +A L++ MPF +
Sbjct: 704 KGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSV 763
Query: 504 --------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+A KA LQL+P ++ V+L+NIYA +G W V+ +R++MR ++K+P
Sbjct: 764 CKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEP 823
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAV 615
G SWIE+K ++H F+ D HP +EI+ L + +M+ GY+PD + L E+ A
Sbjct: 824 GCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVLLDEEVEEPAQ 883
Query: 616 AFGLLSTSY 624
L + +Y
Sbjct: 884 LEELRTCAY 892
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 262/497 (52%), Gaps = 10/497 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + + C + L GK HA + + ++SN + +Y KC L A F++
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N +++ YA + AR+ F ++P+ D+VS+N++IS + G+ ++ +F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M D +L+ ++ A + Q+H L + GFD ++LL Y++
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD++ VF E+ E K+ VSW++M+ Q+ +E L+LF+EM + +G+ AS+
Sbjct: 231 RLDDSLSVFSELPE-KNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ +L L G + H+H +KS F + +G+ +D+YAKC G M D KV +P+ L
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC-GRMADAQKVLSSMPKCSL 348
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+N +I GY++ + QAL F+ L + G D+ + ++AC+++ L G+Q+H
Sbjct: 349 QSYNAIIVGYARSDR-GFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHG 407
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K I + I V NA++ MY KC L +A LFD M + VS N++IA Q+G
Sbjct: 408 LAVK-SISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEE 466
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSC 476
E L F M+ + + P + T+ SVL ACA + G + + ++K GF+ +
Sbjct: 467 ETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG--AA 524
Query: 477 MIDLLGRAGKLTDAERL 493
++D+ + G + A+++
Sbjct: 525 LVDMYCKCGMIEKADKI 541
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 142/310 (45%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C GR+ L TG +H +K+ + F +++ + +Y KCG + A ++T
Sbjct: 486 TYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRT 545
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S +N +IS ++ +E A F
Sbjct: 546 EQKTMVS-------------------------------WNAIISGFSLLQQSEDAHKFFS 574
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E + D FT + ++ +N + L KQ+H I + ++L+ YS+ G
Sbjct: 575 RMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCG 634
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +++ +F E +D V+WN+M+ Y H G EAL+LF+ M + + + T S+L
Sbjct: 635 NMQDSQLMF-EKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVL 693
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + + GL F L + G S S ++D+ + SG + + + + +++P +
Sbjct: 694 RACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGR-SGRIDEALNLVQKMPFEA 752
Query: 297 DLVLWNTMIS 306
D V+W ++S
Sbjct: 753 DAVIWRNLLS 762
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 358/651 (54%), Gaps = 61/651 (9%)
Query: 2 FRQVLKTCVGRR-DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F ++L +C+ + + + +HA +K+ ++ N I YSKCG L F++
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N++++N ++ + + A LF +P+ D ++N+++S +A E AL F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ F + ++ + +++A S N++ Q+H L F + ++L+ YS+ G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+RVF EMG+ ++ VSWNS++ + Q+ +EAL +FQ M+ ++ D TLAS++
Sbjct: 202 NVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIP--- 294
+A SL + G + H ++K+ +N I + +D+YAKCS +++ +F+ +P
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS-RIKEARFIFDSMPIRN 319
Query: 295 ----------------------------QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ ++V WN +I+GY+Q E +++AL F L
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALSLFCLLK 378
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAMYS 380
R P SF ++ AC++L+ LG Q H +K + + I V N+L+ MY
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG +E+ +F +M E + VS N+MI G+AQ+G G EAL LF MLE+ P +IT +
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
VLSAC H G V EG+ YFS M FG P +HY+CM+DLLGRAG L +A+ +IE MP
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 501 PGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P S+ + A L++EPSN+ PYV+L+N+YA GKWE+V +R
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
+ MR GV K+PG SWI+++ HVF+ +D SHP K+IH+ L+ + +M+
Sbjct: 619 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/632 (34%), Positives = 345/632 (54%), Gaps = 41/632 (6%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+A A+++FD +P+ D+V +N++I Y G ++ +F +M T++ L+ A
Sbjct: 196 LADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKA 255
Query: 141 SSNN----LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
+ + + + LA+ G D + V SL+ YS G A VF M +
Sbjct: 256 CGQSGLKKVGMCAHSYVLALGMGNDVF--VLTSLVDMYSNLGDTGSAALVFDSMCS-RSL 312
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
+SWN+M+ Y Q+ E+ LF+ +V G D TL S++ + DL G H+
Sbjct: 313 ISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSC 372
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+I+ + + + ++D+Y+KC G ++ VF + + +++ W M+ G SQ Y++
Sbjct: 373 IIRKELESHLVLSTAIVDMYSKC-GAIKQATIVFGRMGKKNVITWTAMLVGLSQNG-YAE 430
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNAL 375
AL F ++ + + V ++ C++L S + G+ +HA I+ + + + +AL
Sbjct: 431 DALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV-ITSAL 489
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
+ MY+KCG + A +LF+ V L NSMI GY HG G AL ++ M+E + P
Sbjct: 490 IDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPN 549
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
TFVS+L+AC+H+G V EG+ F M+ P+ +HY+C++DL RAG+L +A+ L+
Sbjct: 550 QTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELV 609
Query: 495 EAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ MPF P + L+A A+ + L+ N+ YVML+NIYA + KWE
Sbjct: 610 KQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWE 669
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
V IR LMR +G++K PG+S IEV +++ F A D SHP +I+ LE + +++ G
Sbjct: 670 SVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEG 729
Query: 598 YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
Y+PD K K L HSE+LA+AFGLLST G I + KNLR+C DCHN K
Sbjct: 730 YIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTK 789
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+IS I REI VRD RFH F +G+CSC D+W
Sbjct: 790 YISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 231/484 (47%), Gaps = 43/484 (8%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L+ KS+HA +KN V ++L+ I +YS G L A + F+Q N ++A
Sbjct: 60 LIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAG 119
Query: 75 YARQLRIASARQLFDQIPQPDLV--SYNTL--ISAYADCGDTESALSLFKDMREKRFDTD 130
+ R + +LF + D+ SY + + A D D E + + +
Sbjct: 120 FLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRA--------- 170
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
A+ GF + V +S++ + G+L +A++VF M
Sbjct: 171 ------------------------AVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGM 206
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
E KD V WNS++ Y Q E++Q+F EM+ L T+A++L A G
Sbjct: 207 PE-KDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVG 265
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
+ H++++ G + + + L+D+Y+ GD VF+ + L+ WN MISGY Q
Sbjct: 266 MCAHSYVLALGMGNDVFVLTSLVDMYSNL-GDTGSAALVFDSMCSRSLISWNAMISGYVQ 324
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
++ F++L + G D + V +I CS S G+ +H+ I+ E+ S+ +
Sbjct: 325 NGMIP-ESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLV 383
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
++ A+V MYSKCG ++ A +F RM + N ++ +M+ G +Q+G +AL+LF M E
Sbjct: 384 -LSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEE 442
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ ++T VS++ CAH G + +G+ + G+ + S +ID+ + GK+
Sbjct: 443 KVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIR-HGYAFDAVITSALIDMYAKCGKIHS 501
Query: 490 AERL 493
AE+L
Sbjct: 502 AEKL 505
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 166/330 (50%), Gaps = 5/330 (1%)
Query: 127 FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
F+ S L+ SN L +K +H I + + L+ YS GFL A+ V
Sbjct: 42 FNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNV 101
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F + + + N+M+ + ++++ +E +LF+ M S + ++ YT L A T L D
Sbjct: 102 F-DQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLD 160
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G++ ++ GFH + ++GS +++ K G + D KVF+ +P+ D+V WN++I
Sbjct: 161 DEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVK-RGYLADAQKVFDGMPEKDVVCWNSIIG 219
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIR 365
GY QK + +++ F ++ G P + ++ AC +G H+ + + +
Sbjct: 220 GYVQKGLFW-ESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGM- 277
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + V +LV MYS G+ A +FD M + +S N+MI+GY Q+G+ E+ LF
Sbjct: 278 GNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRR 337
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
++++ + T VS++ C+ T + G+
Sbjct: 338 LVQSGSGFDSGTLVSLIRGCSQTSDLENGR 367
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 46/316 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +++ C DL G+ LH+ ++ + LS + +YSKCG + A F +
Sbjct: 349 TLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRM 408
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NV ++ +L ++ G E AL LF
Sbjct: 409 GKKNVITWTAMLVGLSQN-------------------------------GYAEDALKLFC 437
Query: 121 DMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E++ + TL L+ A +L + +H I G+ A + ++L+ Y++ G
Sbjct: 438 QMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCG 497
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A+++F +KD + NSM++ YG H G AL ++ M+ +L + T S+L
Sbjct: 498 KIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLL 557
Query: 239 TAFTSLEDLV--GGLQFHA----HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TA S LV G FH+ H ++ Q+ H L+DL+++ +G + + ++ ++
Sbjct: 558 TA-CSHSGLVEEGKALFHSMERDHDVRP---QHKHYAC-LVDLHSR-AGRLEEADELVKQ 611
Query: 293 IP-QPDLVLWNTMISG 307
+P QP + ++SG
Sbjct: 612 MPFQPSTDVLEALLSG 627
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/698 (32%), Positives = 375/698 (53%), Gaps = 64/698 (9%)
Query: 36 LSNHFIL--LYSKCGCLSAAHHAFNQTQHANVFSF-------NVLLAAYARQLRIASARQ 86
+++ FI+ L + C L A +H + F LL YA+ + A++
Sbjct: 7 VADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKR 66
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI--TASSNN 144
+F+ + DL +++++ISAYA G E A+ L++ M + + + T + + AS
Sbjct: 67 VFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAG 126
Query: 145 LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
L + +H + + +SLL Y + + EA++VF M + ++ S+ +M+
Sbjct: 127 LADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM-KARNVRSYTAMIS 185
Query: 205 AYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
AY Q E EAL+LF M ++ + + YT A+IL A L +L G + H HL GF
Sbjct: 186 AYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD 245
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
N + + L+ +Y KC G + KVF+ + +++ W +MI+ Y+Q +AL FK
Sbjct: 246 TNVVVQNALVTMYGKC-GSPVEARKVFDSMTARNVISWTSMIAAYAQHGN-PQEALNLFK 303
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
+++ P SF ++AC+ L G++IH ++ + S ++ +L++MY++C
Sbjct: 304 RMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQM--ETSLLSMYARC 358
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G+L+DARR+F+RM + S N+MIA + QHG +ALR++ M + IP ITFVSVL
Sbjct: 359 GSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVL 418
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
AC+HT VA+ + +F + G P EHY CM+D+LGR+G+L DAE L+E MP+
Sbjct: 419 VACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTD 478
Query: 503 SIAL-----------------KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++A +AA +L P+ +PYV L+N+YAA+ ++++ +R+
Sbjct: 479 AVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKE 538
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVA-------EDGSHPMIKEIHNYLEEMSRKMKQAGY 598
M +RGV S+IE+ ++H+F + E ++ + + L E+ MKQAGY
Sbjct: 539 MEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGY 598
Query: 599 VPD----------------KEKRLVHHSEKLAVAFGLLSTSYGE---PILVMKNLRICGD 639
VPD K++ L HSE+LA+A+GL++ + P+ V+ + R+C D
Sbjct: 599 VPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSD 658
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CH+AIK +S I + I VRD RFH F+ G CSCGD+W
Sbjct: 659 CHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 31/210 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C L G+ +H ++ + S + + +Y++CG L A FN+
Sbjct: 313 SFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFNRM 371
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYN-TLISAYADCGDTESALSLF 119
+ + FS N ++AA+ + R A +++ ++ Q + + T +S C T SL
Sbjct: 372 KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHT----SLV 427
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D R+ F G++ + LC++ L R+G
Sbjct: 428 ADCRD--FFQSLVMDHGVVPLVEHYLCMVDVL-----------------------GRSGR 462
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
L +A+ + M D V+W +++ +H
Sbjct: 463 LGDAEELVETMPYQTDAVAWMTLLSGCKRH 492
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/620 (35%), Positives = 340/620 (54%), Gaps = 55/620 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V D+V GK H++ +K Y+ + + +Y K G
Sbjct: 120 TLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTG------------ 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
F F+ AR+LFD++P+ + VS+ T+IS YA + A+ +F+
Sbjct: 168 -----FVFD--------------ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFE 208
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + + F L+ +++A ++++ + +Q+H LAI G SV N+L+T Y++ G
Sbjct: 209 LMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCG 268
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A R F G+ K+ ++W++MV Y Q + +AL+LF +M S + +TL ++
Sbjct: 269 SLDDAVRTFEFSGD-KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVI 327
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L +V G Q H+ K GF ++ S ++D+YAKC G + D K FE + QPD+
Sbjct: 328 NACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKC-GSLADARKGFECVQQPDV 386
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
VLW ++I+GY Q +Y + L + K+ P++ + V+ ACS+L+ GKQ+HA
Sbjct: 387 VLWTSIITGYVQNGDY-EGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHA 445
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK + + + +AL AMY+KCG+L+D +F RMP + +S N+MI+G +Q+G G
Sbjct: 446 RIIKYGFKL-EVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGN 504
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+AL LFE ML I P +TFV++LSAC+H G V G +YF MM D F P EHY+CM
Sbjct: 505 KALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACM 564
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+D+L RAGKL +A+ IE+ + G + + A ++L +
Sbjct: 565 VDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPES 624
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L++IY A G E V +RR+M+ RGV K+PG SWIE+K +HVFV D HP +
Sbjct: 625 SAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVD 684
Query: 581 EIHNYLEEMSRKMKQAGYVP 600
EI LE +++ M GY P
Sbjct: 685 EIRLELELLTKLMIDEGYQP 704
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 262/508 (51%), Gaps = 48/508 (9%)
Query: 3 RQVLKT---CVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
RQ+L+ C ++++ G++LHA LK S Y++N F+ LY+K LS HA
Sbjct: 12 RQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLS---HALT- 67
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL--VSYNTLISAYADCGDTES--- 114
LFD I D VS+N+LI+A++ + S
Sbjct: 68 ---------------------------LFDSINDNDKDDVSWNSLINAFSQNHSSSSSSF 100
Query: 115 ALSLFKD-MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLL 171
A+SLF+ MR + TL+G+ +A+SN ++ KQ H +A+ G V +SLL
Sbjct: 101 AISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLL 160
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
Y + GF+ +A+++F M E ++ VSW +M+ Y +A+++F+ M + +
Sbjct: 161 NMYCKTGFVFDARKLFDRMPE-RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNE 219
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
+ L S+L+A TS + G Q H+ IK+G + + L+ +YAKC G + D ++ FE
Sbjct: 220 FALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKC-GSLDDAVRTFE 278
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+ + W+ M++GY+Q + SD+AL F K++ G P + + V VI+ACS+L +
Sbjct: 279 FSGDKNSITWSAMVTGYAQGGD-SDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVV 337
Query: 352 -GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
GKQ+H+ K+ ++ V +A+V MY+KCG+L DAR+ F+ + + + V S+I GY
Sbjct: 338 EGKQMHSFAFKLGF-GLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGY 396
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
Q+G L L+ M + P +T SVL AC+ + +G++ + + +GF+ E
Sbjct: 397 VQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIK-YGFKLE 455
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
S + + + G L D + MP
Sbjct: 456 VPIGSALSAMYTKCGSLDDGYLIFWRMP 483
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 339/612 (55%), Gaps = 38/612 (6%)
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS-GLITASSNNLCLI-KQLH--CL 154
+NT + A ALSL+ M + FT L + ++ +L ++ Q H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE-MGEIKDEVSWNSMVVAYGQHREGL 213
+ C F+ + V L++ Y + +D A++VF E K V +N++V Y + +
Sbjct: 68 KVGCVFEPF--VQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
+A+ LF++M + ++ TL ++ A S +L G H +K GF + + + I
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+Y KC G + K+F+E+P L+ WN M+SGY+Q + L ++ ++ G HPD
Sbjct: 186 TMYMKC-GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNG-LATNVLELYRNMDMNGVHPD 243
Query: 334 DCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ V V+S+C+NL + S+G ++ SN +NNAL+ MY++CGNL A+ +F
Sbjct: 244 PVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPF-LNNALINMYARCGNLTKAQAVF 302
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
D MPE VS ++I GY HG G A++LF+ M+ + I P FV VLSAC+H G
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------- 503
+G +YF MMK + EP EHYSCM+DLLGRAG+L +A+ LIE+MP P
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422
Query: 504 --------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+A A ++LEP N YV+L+NIY+ + + V IR +M+++ ++K P
Sbjct: 423 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEK----------R 605
G S++E+K ++H F+ D +H EI+ LEE+ + Q P+K+ R
Sbjct: 483 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNKDGFTR 542
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
+ HSEKLAVAFGLL+T+ G ++++KNLRIC DCH K +S I R++TVRD RFH
Sbjct: 543 VGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHH 602
Query: 666 FKDGRCSCGDYW 677
F++G CSC DYW
Sbjct: 603 FRNGSCSCKDYW 614
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 204/451 (45%), Gaps = 46/451 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF LK+C + G H K F ++ I +Y K + A F +
Sbjct: 42 TFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEEN 101
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H+ R+L V YN L+S Y A+ LF+
Sbjct: 102 FHS-------------RKLT----------------VCYNALVSGYVSNSKCSDAVLLFR 132
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E+ + TL GLI A S NL L LHC + GFD SV N +T Y + G
Sbjct: 133 QMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCG 192
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+++F EM +K +SWN+MV Y Q+ L+L++ M + D TL +L
Sbjct: 193 SVNYAQKLFDEM-PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVL 251
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ +L G + + SGF N + + LI++YA+C G++ VF+ +P+ L
Sbjct: 252 SSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARC-GNLTKAQAVFDGMPERTL 310
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
V W +I GY + + A+ FK++ R G PD +FVCV+SACS+ G L
Sbjct: 311 VSWTAIIGGYGM-HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSH----AGLTDQGL 365
Query: 359 T-IKIEIRSNRISVN----NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
K+ R+ ++ + +V + + G L++A+ L + MP ++ + G +
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 414 GIGMEALRL-FEWMLETNIPPTNITFVSVLS 443
+E L FE ++E + P NI + +LS
Sbjct: 426 HKNVELAELAFERVIE--LEPENIGYYVLLS 454
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 298/543 (54%), Gaps = 34/543 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V +++ Y + G LD A+ +F + ++D WN+M+ H +G EAL+L ++M
Sbjct: 39 VATAVMNAYGKCGDLDSARGLFDRI-LVRDAAVWNAMISLLVVHEQGDEALELCRQMRLD 97
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ T + L A D GL+ HA + G ++ + + L+++ G + D
Sbjct: 98 GVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLED 157
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++F+ + +++ W M+ +SQ + +AL F+ + G P+D +F V++A
Sbjct: 158 AREIFDAMTTRNVISWTAMVGVHSQLG-LNREALRIFRSILLEGVTPNDVTFTAVLNASG 216
Query: 346 NL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
NL S K + A + N + V N L+ KCG+LE+ + F MP N VS N
Sbjct: 217 NLASIRAAKLVQACLSETGFLGN-VEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWN 275
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
S IA AQHG G+ + LF+ M I ++T + VLS+C+H G VA+G YF M
Sbjct: 276 SAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVD 335
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------------------AL 506
+G E EHYSC+IDLL RAG L AE ++ +PF S+
Sbjct: 336 YGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLERGG 395
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
+A L L P + PY+++ N+YA +GKW E A +R+ M D G +K+PG SWIEVK ++
Sbjct: 396 RATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKGRI 455
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H F D SHP EIH LE ++ KMK+AG+V D KE L HSEKLA
Sbjct: 456 HEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEKLA 515
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGL+ST+ GEP+ +MKNLR+C DCH+A KFIS + GREI VRD YRFH F+ G CSC
Sbjct: 516 IAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCE 575
Query: 675 DYW 677
D+W
Sbjct: 576 DFW 578
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 191/433 (44%), Gaps = 27/433 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V ++ AY + + SAR LFD+I D +N +IS + AL L + MR
Sbjct: 36 DVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMR 95
Query: 124 EKRFDTDGFTLS-GLITASSNNLCLIK------QLHCLAIYCGFDHYASVNNSLLTC-YS 175
DG T S G A+ N C + ++H A G D V +L+ Y+
Sbjct: 96 -----LDGVTPSKGTCVAALNACCHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYA 150
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
R G L++A+ +F M ++ +SW +MV + Q EAL++F+ ++ + + T
Sbjct: 151 RLGSLEDAREIFDAM-TTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFT 209
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L A +L + A L ++GF N + +GL+ KC G + + K F +P
Sbjct: 210 AVLNASGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKC-GSLEEVAKFFRVMPV 268
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
+ V WN+ I+ +Q + + F+ + G + + V+S+CS+ L Q
Sbjct: 269 QNQVSWNSAIAANAQHGN-GVRGVELFQTMQLEGIDTGSVTLIGVLSSCSH--AGLVAQG 325
Query: 356 HALTIKIEIRSNRISVN---NALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGY 410
++ + + + + + ++ + S+ G LE A R+P + + +++ G
Sbjct: 326 YSYFLNMHVDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGC 385
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
HG R + +L N P + ++ + + A GK E ++ K M P+
Sbjct: 386 KLHGDLERGGRATQRILGLN-PGSTGPYLVMHNLYAGAGKWPEAA---AVRKSMVDLGPK 441
Query: 471 GEHYSCMIDLLGR 483
E I++ GR
Sbjct: 442 KEPGLSWIEVKGR 454
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 332 PDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
P+D ++V ++ AC + P I A + V A++ Y KCG+L+ AR L
Sbjct: 2 PNDVTYVAILGACGH--PWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSARGL 59
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
FDR+ + N+MI+ H G EAL L M + P+ T V+ L+AC H+
Sbjct: 60 FDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHSRDF 119
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+EG + + +++ G + + + R G L DA + +AM
Sbjct: 120 SEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAM 165
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/633 (36%), Positives = 341/633 (53%), Gaps = 51/633 (8%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+A A+ +F + P YN+LI A + AL L+ M + D T +I A
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204
Query: 141 SSNNLCLIKQL--HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
+ + L H + GF+ + + +SL+ Y+ L AK++F + +D VS
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLF-NLCSARDVVS 263
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WN+M+ Y +H E A +F MV D+ + +++ + +VG + L
Sbjct: 264 WNAMIDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYA----IVGKIDEAKRLF 315
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+N + ++ + KC G++ D +F E+P D+V WN+M++ Y+Q + ++A
Sbjct: 316 DEMPERNLVSWNSMLAGFVKC-GNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGK-PNEA 373
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN----A 374
L F ++ VG P + + V ++SAC++L +L K +H T I NRI VN+ A
Sbjct: 374 LALFDQMRAVGVKPTEATVVSLLSACAHLG-ALDKGLHLHTY---INDNRIEVNSIVGTA 429
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV MY+KCG + A ++F+ M + ++ N++IAG A HG EA +LF+ M E + P
Sbjct: 430 LVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPN 489
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ITFV++LSAC+H G V EGQK M +G EP+ EHY C+IDLL RAG L +A LI
Sbjct: 490 DITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELI 549
Query: 495 EAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWE 537
MP P AL A + L+P ++ Y++L+NIYAA+ KW+
Sbjct: 550 GTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWD 609
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA- 596
+ +R LM+ G+ K PG S IE+K +H FVA D SHP +I+ L E+ ++K A
Sbjct: 610 DARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAI 669
Query: 597 GYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY DKE L HSEKLA+A+GLL E I ++KNLR+C DCH+ I
Sbjct: 670 GYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVI 729
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K IS + GREI VRD RFH F+DG CSC D+W
Sbjct: 730 KLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 44/417 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K C G +H +K+ +Y+ + I LY+ L AA FN
Sbjct: 197 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 256
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N ++ Y + + + AR +FD++ D++S+NT+I+ YA G + A LF
Sbjct: 257 SARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFD 316
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+M E+ + NS+L + + G +
Sbjct: 317 EMPERNLVS-------------------------------------WNSMLAGFVKCGNV 339
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++A +F EM +D VSWNSM+ Y Q + EAL LF +M ++ + T+ S+L+A
Sbjct: 340 EDAFGLFSEM-PCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSA 398
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L L GL H ++ + NS +G+ L+D+YAKC G + +VF + D++
Sbjct: 399 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKC-GKISLATQVFNAMESKDVLA 457
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHAL 358
WNT+I+G + +A FK++ G P+D +FV ++SACS+ + K + +
Sbjct: 458 WNTIIAGMAIHGNVK-EAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCM 516
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG 414
+ I ++ ++ + ++ G LE+A L MP E N +L +++ G HG
Sbjct: 517 SSSYGIEP-KVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHG 572
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 236/709 (33%), Positives = 363/709 (51%), Gaps = 82/709 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C L+ G+ +H +K Y+ N I +Y K G
Sbjct: 126 TFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGF----------- 174
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A ++FD++P DLVS+N+++S Y GD S+L FK
Sbjct: 175 --------------------IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFK 214
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M D F + + A S CL ++HC I + V SL+ Y + G
Sbjct: 215 EMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCG 274
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A+RVF + K+ V+WN+M+ G +E + + D+ T+ ++L
Sbjct: 275 KVDYAERVFNRIYS-KNIVAWNAMI---GGMQEDDKVIP------------DVITMINLL 318
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ + L+ G H I+ F + + L+D+Y KC G+++ VF ++ + ++
Sbjct: 319 PSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKC-GELKLAEHVFNQMNEKNM 377
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V WNTM++ Y Q E+Y +AL F+ + PD + V+ A + L S S GKQIH+
Sbjct: 378 VSWNTMVAAYVQNEQYK-EALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHS 436
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K+ + SN ++NA+V MY+KCG+L+ AR FD M + VS N+MI YA HG G
Sbjct: 437 YIMKLGLGSNTF-ISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGR 495
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+++ F M P TFVS+L+AC+ +G + EG +F+ MK +G +P EHY CM
Sbjct: 496 TSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCM 555
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLLGR G L +A+ IE MP P + +A AA H L L+ N
Sbjct: 556 LDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNT 615
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YA +G+WE+V I+ LM+++G+ K G S +++ + F+ +D SH
Sbjct: 616 GCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTN 675
Query: 581 EIHNYLEEMSRKMKQAGYV------------PDKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I++ L+ + +K+ + Y+ + +HS KLA+ FGL+ST+ G P+
Sbjct: 676 LIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPV 735
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+V KN RIC DCH A K IS + REI V D FH F+DG CSC DYW
Sbjct: 736 IVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 213/445 (47%), Gaps = 23/445 (5%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
+F N + L + + +A +F+++ D +N +I Y + G + A
Sbjct: 49 SFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEA 108
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTC 173
+ + M + +D FT +I A L L+ +++H I GFD V N L+
Sbjct: 109 IDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDM 168
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y + GF++ A++VF EM ++D VSWNSMV Y +GL +L F+EM+ L D +
Sbjct: 169 YLKIGFIELAEKVFDEM-PVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFG 227
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ S L A + L G++ H +I+S + + + LID+Y KC G + +VF I
Sbjct: 228 MISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKC-GKVDYAERVFNRI 286
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-G 352
++V WN MI G + ++ PD + + ++ +CS L G
Sbjct: 287 YSKNIVAWNAMIGGMQEDDKVI----------------PDVITMINLLPSCSQSGALLEG 330
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K IH I+ ++ + + ALV MY KCG L+ A +F++M E N VS N+M+A Y Q
Sbjct: 331 KSIHGFAIR-KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQ 389
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+ EAL++F+ +L + P IT SVL A A +EG++ S + + G
Sbjct: 390 NEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKL-GLGSNTF 448
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++ + + G L A + M
Sbjct: 449 ISNAIVYMYAKCGDLQTAREFFDGM 473
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/568 (36%), Positives = 319/568 (56%), Gaps = 37/568 (6%)
Query: 143 NNLCLIKQLHCLAIYCG-FDHYASVNNSLLTC-YSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+N+ KQ H + G F +N + TC S G +D A +F +M E+ +N
Sbjct: 42 SNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL-GSFQFN 100
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ + + EAL ++EM + D +T ++L A L + G+Q HAH++K
Sbjct: 101 TMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKL 160
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G + + + LI +Y KC G++ C VFE++ + + W+ +I+ ++ +SD L
Sbjct: 161 GLENDVFVQNSLISMYGKC-GEIGVCCAVFEQMNERSVASWSALITAHASLGMWSD-CLR 218
Query: 321 CFKKLNRVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
++ GY ++ V V+SAC++L LG+ +H ++ + + V +L+ M
Sbjct: 219 LLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLR-NVSGLNVIVETSLIEM 277
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KCG+L LF +M + N +S + MI+G A HG G E LR+F MLE + P +I +
Sbjct: 278 YLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVY 337
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
V VL+AC+H G V EG + F+ MK G EP +HY CM+DL+GRAGK+ +A LI++MP
Sbjct: 338 VGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMP 397
Query: 499 FNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + + AA +L+ A YV+L+N+YA + +WE+VA
Sbjct: 398 MEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAK 457
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
R M +G+ ++PGFS +EVK++MH FV++D HP + ++ L +M ++K GY PD
Sbjct: 458 TRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPD 517
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
K++RL HS+KLA+A+ L+ TS G PI +++NLR+C DCH K IS
Sbjct: 518 TTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISI 577
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I REITVRD +RFH FKDG CSC DYW
Sbjct: 578 IFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 162/342 (47%), Gaps = 28/342 (8%)
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC 146
+F Q+ + +NT++ + +TE AL +K+M E+ D FT L+ A +
Sbjct: 87 IFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPA 146
Query: 147 LIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+ + Q+H + G ++ V NSL++ Y + G + VF +M E + SW++++
Sbjct: 147 VEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNE-RSVASWSALIT 205
Query: 205 AYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
A+ + L+L +M + + L S+L+A T L L G H L+++
Sbjct: 206 AHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSG 265
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
N + + LI++Y KC G + M +F+++ + + + ++ MISG + Y + L F
Sbjct: 266 LNVIVETSLIEMYLKC-GSLYKGMCLFQKMAKKNKLSYSVMISGLAM-HGYGREGLRIFT 323
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS-NRISVNNA-------- 374
++ G PDD +V V++ACS HA ++ ++ NR+ + +
Sbjct: 324 EMLEQGLEPDDIVYVGVLNACS----------HAGLVQEGLQCFNRMKLEHGIEPTIQHY 373
Query: 375 --LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+V + + G +++A L MP E N V S+++ H
Sbjct: 374 GCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVH 415
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 38/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C + G +HA LK + ++ N I +Y KCG + F Q
Sbjct: 133 TYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQM 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S++ L+ A+A + ++DC L L
Sbjct: 193 NERSVASWSALITAHAS-------------------------LGMWSDC------LRLLG 221
Query: 121 DM-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
DM E + + L +++A ++ L L + +H + V SL+ Y +
Sbjct: 222 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKC 281
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L + +F +M + K+++S++ M+ H G E L++F EM+ L D +
Sbjct: 282 GSLYKGMCLFQKMAK-KNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGV 340
Query: 238 LTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
L A + + GLQ F+ ++ G ++DL + +G + + +++ + +P +
Sbjct: 341 LNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGR-AGKIDEALELIKSMPME 399
Query: 296 PDLVLWNTMISG 307
P+ VLW +++S
Sbjct: 400 PNDVLWRSLLSA 411
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/667 (34%), Positives = 355/667 (53%), Gaps = 48/667 (7%)
Query: 52 AAHHAFN-----QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAY 106
A++H N H ++ ++ AY + + A + F+ I +L S+NT+++++
Sbjct: 29 ASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASH 88
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHY 163
+ L LFK M ++ D F L + A L L K H LAI +
Sbjct: 89 SKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFG-LSLFQGAKLFHSLAIKLRLEGD 147
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V +L+ Y+ G L+EA +VF E+ +K+ V W M+ + E +LF M
Sbjct: 148 PYVAPALMNVYTELGSLEEAHKVFEEV-PLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF-HQNSHIGSGLIDLYAKCSGD 282
LD + + ++ A ++ G FH IK F N + + L+D+Y KC G
Sbjct: 207 RSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKC-GF 265
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +K+FEEI D+V+W+ +I+G+++ + +++ F+++ P+ +F ++
Sbjct: 266 LDFALKLFEEISYRDVVVWSAIIAGFARNGR-ALESISMFRQMLADSVTPNSVTFASIVL 324
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMPEHN 399
ACS+L S G+ +H I+ + + V N + + MY+KCG + A R+F ++PE N
Sbjct: 325 ACSSLGSLKQGRSVHGYMIRNGVE---LDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKN 381
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
S ++MI G+ HG+ EAL LF M N P ++TFVSVLSAC+H+G++ EG +F
Sbjct: 382 VFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFK 441
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---------------- 503
M +G P EHY+CM+DLLGRAGK+ +A I MP PG+
Sbjct: 442 SMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRA 501
Query: 504 -IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
+A + A L LE + YVML+NIYA G WE V R M ++G+ K GF+ IE+
Sbjct: 502 ELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEI 561
Query: 563 KKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHS 610
++++++F +ED +I + + +M++ GYVPD K++ L HS
Sbjct: 562 EEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHS 621
Query: 611 EKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGR 670
EKLA+ FGLL++ G PI + KN+R+CGDCH A KFIS I R+I +RD RFH +DG
Sbjct: 622 EKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGV 681
Query: 671 CSCGDYW 677
CSCGDYW
Sbjct: 682 CSCGDYW 688
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 182/395 (46%), Gaps = 38/395 (9%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
+K C G K H+L +K + Y++ + +Y++ G L AH
Sbjct: 120 VKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAH----------- 168
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
++F+++P + V + +I + + + LF MR
Sbjct: 169 --------------------KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRS 208
Query: 126 RFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGF-DHYASVNNSLLTCYSRNGFLDE 182
F+ D F + GLI A N K H L I F D + SL+ Y + GFLD
Sbjct: 209 GFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDF 268
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A ++F E+ +D V W++++ + ++ LE++ +F++M++ + + T ASI+ A +
Sbjct: 269 ALKLFEEI-SYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACS 327
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
SL L G H ++I++G + + ID+YAKC G + +VF +IP+ ++ W+
Sbjct: 328 SLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKC-GCIVTAYRVFCQIPEKNVFSWS 386
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKI 362
TMI+G+ +AL F ++ V P+ +FV V+SACS+ H ++
Sbjct: 387 TMINGFGM-HGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSR 445
Query: 363 EIRSNRISVNNA-LVAMYSKCGNLEDARRLFDRMP 396
+ + + A +V + + G +++A + MP
Sbjct: 446 DYGITPVEEHYACMVDLLGRAGKIDEALSFINNMP 480
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C L G+S+H ++N V FI +Y+KCGC+ A+ F Q
Sbjct: 318 TFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQI 377
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NVFS++ ++ + A A LF ++ P+ V++ +++SA + G E
Sbjct: 378 PEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGW 437
Query: 117 SLFKDM 122
S FK M
Sbjct: 438 SHFKSM 443
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/597 (37%), Positives = 317/597 (53%), Gaps = 65/597 (10%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLT-CYSRN-GFLDEAKRVFYEMGEIKDEVSWN 200
+N+ ++Q+H + G + LL C S N G L A+ VF + + WN
Sbjct: 29 SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR-PNTFMWN 87
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Y +E EAL L+ M+ + + YT +L A +S+ L Q HAH+IK
Sbjct: 88 TMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKM 147
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS----- 315
GF + + L+++Y+K SGD++ +F+++ Q D V WN+MI GY++ E
Sbjct: 148 GFGSEIYTTNSLLNVYSK-SGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEI 206
Query: 316 -------------------------DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+AL F ++ G D+ + V + AC++L
Sbjct: 207 FNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GK IHA K EI + I + L+ MY+KCG+LE+A +F +M E +MI+G
Sbjct: 267 DQGKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YA HG G EAL F M + P +TF +L+AC+H G V E + F M+ + GF+P
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKP 385
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI---ALKAANH--------------F 512
EHY CM+DLLGRAG L +AE LIE MP P + AL A H
Sbjct: 386 SIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKIL 445
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+Q++P + Y+ LA+I+AA+G+W + A +RR M+++GV K PG S I V H F+A
Sbjct: 446 IQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAG 505
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKR------------LVHHSEKLAVAFGLL 620
D SHP IKEI + LE++ ++++ GY P + HHSEKLAV FGL+
Sbjct: 506 DESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G I ++KNLR+C DCH IK IS + REI +RD RFH FKDG C+CGDYW
Sbjct: 566 STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 51/368 (13%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+A AR +FD+I +P+ +NT+I Y++ + E AL L+ M + +T L+ A
Sbjct: 68 LAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKA 127
Query: 141 SSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S+ L +Q+H I GF NSLL YS++G + A+ +F ++ + +D VS
Sbjct: 128 CSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ-RDTVS 186
Query: 199 WNSMVVAYGQHRE-------------------------------GLEALQLFQEMVSLQL 227
WNSM+ Y + E EAL LF M + +
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGI 246
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
LD L S L A L L G HA++ K + +G LID+YAKC GD+ + +
Sbjct: 247 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC-GDLEEAI 305
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++ + + +W MISGY+ +AL F K+ G P+ +F +++ACS+
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGR-GREALEWFMKMQTAGVEPNQMTFTGILTACSH- 363
Query: 348 SPSLGKQIHALTIKIE----IRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+H + E I + S+ + +V + + G L++A L + MP V
Sbjct: 364 ----AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP----V 415
Query: 402 SLNSMIAG 409
N+ I G
Sbjct: 416 KPNAAIWG 423
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 20/318 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C L + +HA +K Y +N + +YSK G + +A F+Q
Sbjct: 120 TFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+N ++ Y + I A ++F+ +P+ +++S+ ++IS G + AL+LF
Sbjct: 180 DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH 239
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN----SLLTCYSR 176
M+ D L + A + +L ++ Q + Y H ++ L+ Y++
Sbjct: 240 RMQTAGIKLDNVALVSTLQACA-DLGVLDQGKWIHAYIK-KHEIEIDPILGCVLIDMYAK 297
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+EA VF +M E K W +M+ Y H G EAL+ F +M + + + T
Sbjct: 298 CGDLEEAIEVFRKMEE-KGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTG 356
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
ILTA + GL A L+ GF + ++DL + +G +++ ++
Sbjct: 357 ILTACSH-----AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGR-AGLLKEAEELI 410
Query: 291 EEIP-QPDLVLWNTMISG 307
E +P +P+ +W +++
Sbjct: 411 ENMPVKPNAAIWGALLNA 428
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 213/588 (36%), Positives = 322/588 (54%), Gaps = 37/588 (6%)
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NGFL 180
+ + DT L+ + N+L + Q+ AI + + V + C +
Sbjct: 20 KHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSM 79
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ +F M E D V +NSM Y + LE LF E++ + D YT S+L A
Sbjct: 80 SYARHLFEAMSE-PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L G Q H +K G N ++ LI++Y +C D+ VF+ I +P +V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE-DVDSARXVFDRIVEPCVVC 197
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
+N MI+GY+++ ++AL F+++ P++ + + V+S+C+ L S LGK IH
Sbjct: 198 YNAMITGYARRNR-PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K + VN AL+ M++KCG+L+DA +F++M +T + ++MI YA HG ++
Sbjct: 257 KKHSF-CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ +FE M N+ P ITF+ +L+AC+HTG+V EG+KYFS M FG P +HY M+D
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LL AG L DA I+ +P +P +A K + +L+ S+
Sbjct: 376 LLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGD 435
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA + KWE V ++R++M+DR K PG S IEV +H F + DG ++
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKL 495
Query: 583 HNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
H L+EM +++K +GYVPD KE L +HSEKLA+ FGLL+T G I
Sbjct: 496 HRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIR 555
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCHNA K IS I GR++ RD RFH F+DG+CSCGD+W
Sbjct: 556 VVKNLRVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 12/365 (3%)
Query: 41 ILLYSKCGCLSAAHH--AFNQTQHANVFSFNVLLAAYARQLRIAS----ARQLFDQIPQP 94
ILL SKC L A+ H SF L + + S AR LF+ + +P
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLH 152
D+V +N++ Y+ + SLF ++ E D +T L+ A + L +QLH
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
CL++ G D V +L+ Y+ +D A+ VF + E V +N+M+ Y +
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVE-PCVVCYNAMITGYARRNRP 211
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL LF+EM L + TL S+L++ L L G H + K F + + + L
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID++AKC G + D + +FE++ D W+ MI Y+ + +++++ F+++ P
Sbjct: 272 IDMFAKC-GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK-AEKSMLMFERMRSENVQP 329
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D+ +F+ +++ACS+ G++ + + I ++V + S GNLEDA
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEF 389
Query: 392 FDRMP 396
D++P
Sbjct: 390 IDKLP 394
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 39/314 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ LH L +K + + Y+ I +Y++C
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE------------ 178
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR +FD+I +P +V YN +I+ YA ALSLF+
Sbjct: 179 -------------------DVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ K + TL ++++ + +L L K +H A F Y VN +L+ +++ G
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A +F +M KD +W++M+VAY H + +++ +F+ M S + D T +L
Sbjct: 280 SLDDAVSIFEKM-RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 239 TAFTSLEDLVGGLQFHAHLI-KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + G ++ + ++ K G + H GS ++DL + +G++ D + +++P
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS-MVDLLSX-AGNLEDAYEFIDKLPIS 396
Query: 296 PDLVLWNTMISGYS 309
P +LW +++ S
Sbjct: 397 PTPMLWRILLAACS 410
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 330/577 (57%), Gaps = 39/577 (6%)
Query: 137 LITASSNNLCLIKQLHCLAIYCGFD-HYASVNNSL---LTCYSRNGFLDEAKRVFYEMGE 192
L T ++L ++Q+H +I G A + L L + A +VF ++ +
Sbjct: 22 LQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEK 81
Query: 193 IKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+ WN+++ Y + + A+ L++EM S + D +T +L A + D+ G
Sbjct: 82 PINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGE 141
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
H+ +I+SGF ++ + L+ LYA C GD+ KVF+++P+ DLV WN++I+G+++
Sbjct: 142 TIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
+ ++AL + +++ G PD + V ++SAC+ + +LGK+ H IK+ + N +
Sbjct: 201 GK-PEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRN-LH 258
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LET 429
+N L+ +Y++CG +E+A+ LFD M + N+VS S+I G A +G+G EA+ LF+ M +
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKE 318
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P ITFV +L AC+H G V EG +YF M + + EP EH+ CM+DLL RAG++
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 490 AERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAA 532
A I MP P + + A LQLEP+++ YV+L+N+YA+
Sbjct: 379 AYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYAS 438
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+W +V IR+ M GV+K PG S +EV ++H F+ D SHP I+ L+EM+ +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDR 498
Query: 593 MKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
++ GYVP +KE LV+HSEK+A+AF L+ST PI V+KNL++C DC
Sbjct: 499 LRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADC 558
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H AIK +S + REI VRD RFH FK+G CSC DYW
Sbjct: 559 HLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 62/324 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK D+ G+++H++ +++ Y+ N + LY+ CG
Sbjct: 123 TYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------ 170
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ASA ++FD++P+ DLV++N++I+ +A+ G E AL+L+
Sbjct: 171 -------------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K DGFT+ L++A + L L K+ H I G +N LL Y+R G
Sbjct: 212 EMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM-YTLASI 237
++EAK +F EM + K+ VSW S++V + G EA++LF+ M S + L T I
Sbjct: 272 RVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGI 330
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMR 284
L A + H ++K GF + H G ++DL A+ +G ++
Sbjct: 331 LYACS-----------HCGMVKEGFEYFRRMSEEYKIEPRIEHFGC-MVDLLAR-AGQVK 377
Query: 285 DCMKVFEEIP-QPDLVLWNTMISG 307
+ ++P QP++V+W T++
Sbjct: 378 KAYEYILKMPMQPNVVIWRTLLGA 401
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ S NVLL YAR R+ A+ LFD++ + VS+ +LI A G + A+ LFK+M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNME 315
Query: 124 EKR-FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS------------L 170
K T G++ A S HC + GF+++ ++ +
Sbjct: 316 SKEGLLPCEITFVGILYACS---------HCGMVKEGFEYFRRMSEEYKIEPRIEHFGCM 366
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+ +R G + +A +M + V W +++ A H G L M LQL
Sbjct: 367 VDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVH--GDSDLAELARMKILQL 421
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 234/719 (32%), Positives = 357/719 (49%), Gaps = 93/719 (12%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G LH LK L N+ I +Y+KCG
Sbjct: 23 GAQLHGALLKLGFGSDTMLGNNLIDMYAKCG----------------------------- 53
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE-KRFDTDGFTLSG 136
+LR+A ++F +P+ ++VS+ L+ + GD L L MR + FTLS
Sbjct: 54 ELRMAG--EVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSA 111
Query: 137 LITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
+ A ++ +H + GF+ + V NSL+ YS+ G + +A+RVF + +
Sbjct: 112 SLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVF-DGTVFR 170
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL-----GLDMYTLASILTAFTSLEDLVG 249
+ V+WN+M+ Y G ++L +F+EM + D +T AS+L A SL
Sbjct: 171 NLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAARE 230
Query: 250 GLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
G Q HA ++ G N+ + L+D+Y KC + M+VF + Q + + W T+I G
Sbjct: 231 GAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVG 290
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRS 366
++Q+ + +A+ F + G D V+ ++ + G+Q+H T+K
Sbjct: 291 HAQEGQVK-EAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGL 349
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ +SV N+L+ MY KCG ++A R F +P N VS +MI G +HG G EA+ +FE M
Sbjct: 350 D-VSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEM 408
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P + ++++LSAC+H+G V E ++YFS ++ P EHY+CM+DLLGRAG+
Sbjct: 409 RAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGE 468
Query: 487 LTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANI 529
L++A+ L+ MP P ++ +A L ++ N V YVML+NI
Sbjct: 469 LSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNI 528
Query: 530 YAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV-AEDGSHPMIKEIHNYLEE 588
+A +G W E +R MR RG++K+ G SW+EV K+ H F D SHP +I L +
Sbjct: 529 FAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRD 588
Query: 589 MSRKMKQA-GYVP--------------DKEKR---LVHHSEKLAVAFGLL---------- 620
+ R M++ GY P D+E R L HSE+LAV LL
Sbjct: 589 VERTMRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEG 648
Query: 621 --STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T E I V KNLR+CGDCH K +S++ GR + VRD RFH F+DG CSC DYW
Sbjct: 649 MGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+A +L A + + GG Q H L+K GF ++ +G+ LID+YAKC G++R +VF +
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKC-GELRMAGEVFGGM 65
Query: 294 PQPDLVLWNTMISGYSQKEEYSD--QALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
P+ ++V W ++ G+ + + + + LG + L+ V P++ + + AC + +
Sbjct: 66 PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVA--PNEFTLSASLKACGVVGDMA 123
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G IH ++ + + V N+LV +YSK G + DARR+FD N V+ N+MI+GY
Sbjct: 124 AGVWIHGACVRAGFEGHHV-VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGY 182
Query: 411 AQHGIGMEALRLFEWML-----ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
A G G ++L +F M E + P TF S+L AC G EG + + M
Sbjct: 183 AHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAM 238
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 316/564 (56%), Gaps = 38/564 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRN---GFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+KQ+ I SV L+ + N ++D A +F ++ + KD + +N M
Sbjct: 45 LKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD-KDIILFNIMAR 103
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y + A LF E++ L D YT +S+L A S + L G+ H +K G +
Sbjct: 104 GYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNH 163
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
N +I LI++YA+C+ DM VF+E+ QP +V +N +I+GY++ + ++AL F++
Sbjct: 164 NIYICPTLINMYAECN-DMNAARGVFDEMEQPCIVSYNAIITGYARSSQ-PNEALSLFRE 221
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
L P D + + VI +C+ L LGK IH +K + + VN AL+ M++KCG
Sbjct: 222 LQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEY-VKKKGFDKYVKVNTALIDMFAKCG 280
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
+L DA +F+ M +T + ++MI +A HG G++A+ +FE M + P ITF+ +L
Sbjct: 281 SLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLY 340
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
AC+H G V +G+ YF M +G P +HY CM+DLLGRAG L +A ++ +
Sbjct: 341 ACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATP 400
Query: 504 I-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
I A + +L+ ++ YV+L+N+YA G+WE+V +R+LM
Sbjct: 401 ILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLM 460
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
+DRGV K PG S +EV +H F + DG H + E+ L+E+ +++K GYVPD
Sbjct: 461 KDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVY 520
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
KE L +HSEKLA+AFGLL+T G I V KNLRICGDCHNA K IS I GR
Sbjct: 521 HADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGR 580
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
+I +RD RFH F+DG+CSCGD+W
Sbjct: 581 KIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 148/325 (45%), Gaps = 61/325 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G LH +K + + Y+ I +Y++C ++AA
Sbjct: 132 TFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAA------- 184
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R +FD++ QP +VSYN +I+ YA ALSLF+
Sbjct: 185 ------------------------RGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFR 220
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+++ + T+ +I + + L L K +H GFD Y VN +L+ +++ G
Sbjct: 221 ELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCG 280
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A +F M ++D +W++M+VA+ H +GL+A+ +F+EM + D T +L
Sbjct: 281 SLTDAISIFEGM-RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLL 339
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG---FHQNS----------HIGSGLIDLYAKCSGDMRD 285
A + HA L++ G F+ S H G ++DL + +G + +
Sbjct: 340 YACS-----------HAGLVEQGRGYFYSMSKTYGITPGIKHYGC-MVDLLGR-AGHLDE 386
Query: 286 CMKVFEEIP-QPDLVLWNTMISGYS 309
+++ + +LW T++S S
Sbjct: 387 AYNFVDKLEIKATPILWRTLLSACS 411
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 322/618 (52%), Gaps = 102/618 (16%)
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
G A V +SLL Y R G +A+ V M + V W++++ A+ H + A L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPH-RTVVGWSALIAAHASHGDAEGAWGL 108
Query: 219 FQEMVS------------LQLGL-----------------------DMYTLASILTAFTS 243
+ M S L GL D ++ L+A
Sbjct: 109 LERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGD 168
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+ D+ G Q H +++K+G ++ + + LID+Y KC G + ++VF+E D+ N
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKC-GRADEIVRVFDESSHMDVASCNA 227
Query: 304 MISGYSQKEEYSD----------------------------------QALGCFKKLNRVG 329
+++G S+ + S+ +A+ F+++ G
Sbjct: 228 LVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEG 287
Query: 330 YHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ + CV+ A +N++ + G+ H +++ + I V +ALV MY+KCG + DA
Sbjct: 288 IEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHD-IYVGSALVDMYAKCGRVRDA 346
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
R +F+ MP N VS N+MI GYA HG A+RLF M + P +TF VL AC+
Sbjct: 347 RMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQA 406
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP------- 501
G EG+ YF+ M+ G P EHY+CM+ LLGRAGKL DA +I MPF P
Sbjct: 407 GWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGS 466
Query: 502 --------GSIALK--AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
G++ L AA + QLEP NA YV+L+NIYA+ W+ V +R +M+ G+
Sbjct: 467 LLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGL 526
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP----------- 600
+K+ G SWIE+K ++H+ +A D SHPM+ I L+ ++ +M++ G+ P
Sbjct: 527 KKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEE 586
Query: 601 -DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
+K+ L HSEKLAVA GL+STS+G P+ V+KNLRICGDCH A+KFIS+ REI VRD
Sbjct: 587 QEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRD 646
Query: 660 TYRFHCFKDGRCSCGDYW 677
T RFH FKDG+CSC DYW
Sbjct: 647 TNRFHHFKDGKCSCADYW 664
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 148/300 (49%), Gaps = 10/300 (3%)
Query: 14 DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
D+ G+ LH +K A ++ I +Y KCG F+++ H +V S N L+A
Sbjct: 171 DVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVA 230
Query: 74 AYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT 129
+R +++ A +LF + + ++VS+ ++++ G A+ LF++M+ + +
Sbjct: 231 GLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEP 290
Query: 130 DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
+ T+ ++ A +N L+ + HC ++ GF H V ++L+ Y++ G + +A+ +F
Sbjct: 291 NSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIF 350
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
M ++ VSWN+M+ Y H E A++LF+ M S + D+ T +L A +
Sbjct: 351 EAM-PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWT 409
Query: 248 VGGLQFHAHLI-KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
G + + K G + ++ L + +G + D + ++P +PD +W +++
Sbjct: 410 EEGRSYFNEMQHKHGISPRMEHYACMVTLLGR-AGKLDDAYDIINQMPFEPDGCIWGSLL 468
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 331/554 (59%), Gaps = 25/554 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
NV+ + L+ YA+ R+ A + F +I +P+ VS+N LI+ + D ++A L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 124 EKRFDT-DGFTLSGLITASSNNL-C-LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
K T D T + L+T + + C L+KQ+H + G H ++ N++++ Y+ G +
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+AKRVF +G KD +SWNSM+ + +H A +LF +M + D+YT +L+A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMKVFEEIPQPDLV 299
+ E + G H +IK G Q + + LI +Y + +G M D + +FE + DL+
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN++I+G++QK S+ A+ F L DD +F ++ +CS+L+ LG+QIHAL
Sbjct: 375 SWNSIITGFAQKG-LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGM 417
K SN V ++L+ MYSKCG +E AR+ F ++ +H+TV+ N+MI GYAQHG+G
Sbjct: 434 ATKSGFVSNEF-VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+L LF M N+ ++TF ++L+AC+HTG + EG + ++M+ ++ +P EHY+
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+DLLGRAG + A+ LIE+MP NP + LK ANH L++EP +
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV L+++Y+ KWEE A+++++M++RGV+K PG+SWIE++ Q+ F AED S+P+ +
Sbjct: 613 FTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQ 672
Query: 581 EIHNYLEEMSRKMK 594
+I+ +++++++M+
Sbjct: 673 DIYMMIKDLTQEMQ 686
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 235/472 (49%), Gaps = 28/472 (5%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
KCG +S +++ N +L +Y + + A LFD++P+ D VS+NT+IS
Sbjct: 28 KCGSIS------------DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHY 163
Y CG E A LF M+ D DG++ S L+ AS L +Q+H L I G++
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM- 222
V +SL+ Y++ +++A F E+ E + VSWN+++ + Q R+ A L M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISE-PNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
+ + +D T A +LT + + L Q HA ++K G I + +I YA C
Sbjct: 195 MKAAVTMDAGTFAPLLTLLD--DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADC- 251
Query: 281 GDMRDCMKVFEEI-PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + D +VF+ + DL+ WN+MI+G+S K E + A F ++ R D ++
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFS-KHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 340 VISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSK--CGNLEDARRLFDRMP 396
++SACS + GK +H + IK + S NAL++MY + G +EDA LF+ +
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLE-QVTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ +S NS+I G+AQ G+ +A++ F ++ + I + F ++L +C+ + GQ+
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
++ GF S +I + + G + A + + + ++A A
Sbjct: 430 IHALATKS-GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%)
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
HC AI CG V+N +L Y + GFL A +F EM + +D VSWN+M+ Y +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK-RDSVSWNTMISGYTSCGK 81
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
+A LF M +D Y+ + +L S++ G Q H +IK G+ N ++GS
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ--ALGCFKKLNRVG 329
L+D+YAKC + D + F+EI +P+ V WN +I+G+ Q + LG + +
Sbjct: 142 LVDMYAKCE-RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM--KAA 198
Query: 330 YHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
D +F +++ + + +L KQ+HA +K+ ++ + I++ NA+++ Y+ CG++ DA
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ-HEITICNAMISSYADCGSVSDA 257
Query: 389 RRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+R+FD + + +S NSMIAG+++H + A LF M + T+ +LSAC+
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK--CGCLSAAHHAFN 58
T+ +L C G + GKSLH + +K + +N I +Y + G + A F
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ ++ S +N++I+ +A G +E A+
Sbjct: 367 SLKSKDLIS-------------------------------WNSIITGFAQKGLSEDAVKF 395
Query: 119 FKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F +R D + S L+ + S+ L L +Q+H LA GF V +SL+ YS+
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSK 455
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ A++ F ++ V+WN+M++ Y QH G +L LF +M + + LD T +
Sbjct: 456 CGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTA 515
Query: 237 ILTA 240
ILTA
Sbjct: 516 ILTA 519
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ-- 59
F +L++C L G+ +HAL K+ + ++ + I++YSKCG + +A F Q
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 60 TQHANVFSFNVLLAAYAR----QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
++H+ V ++N ++ YA+ Q+ + Q+ +Q + D V++ +++A + G +
Sbjct: 471 SKHSTV-AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG 529
Query: 116 LSLFKDMR 123
L L M
Sbjct: 530 LELLNLME 537
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 229/675 (33%), Positives = 348/675 (51%), Gaps = 59/675 (8%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLV 97
N + Y G A F++ N+ S+N L++ Y + I AR +F+ +P+ ++V
Sbjct: 52 NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV 111
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY 157
S+ ++ Y G A LF M E+ + GLI + ++L+ +
Sbjct: 112 SWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDA--RKLY--DMM 167
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G D AS N ++ R G +DEA+ +F EM E ++ ++W +M+ YGQ++ A +
Sbjct: 168 PGKDVVASTN--MIGGLCREGRVDEAREIFDEMRE-RNVITWTTMITGYGQNKRVDVARK 224
Query: 218 LFQEM-----VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
LF+ M VS L YTL+ + F +K N+ I
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF--------FEVMPMKPVIACNAMI---- 272
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+ G++ +VF+++ D W MI Y +K + +AL F ++ R G P
Sbjct: 273 --VALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKG-FELEALELFAQMQRQGVRP 329
Query: 333 DDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
S + ++S C+ L S G+Q+HA ++ + + + V + L+ MY KCG L A+ +
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGD-VYVASVLMTMYVKCGELVKAKLV 388
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
FDR P + + NS+I+GYA HG+G EAL++F M + P +T +++L+AC++ GK+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKL 448
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-------- 503
EG + F M+ F P EHYSC +D+LGRAGK+ A LI +M P +
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLG 508
Query: 504 ---------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
+A AA ++EP NA PY++L++I A+ KW +VA +R+ MR + V K
Sbjct: 509 ACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKF 568
Query: 555 PGFSWIEVKKQMHVFVAED-GSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
PG SWIEV K++H+F +HP I LE+ +++AGY PD
Sbjct: 569 PGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEE 628
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
K L HSE+LAVA+GLL G PI VMKNLR+CGDCH AIK IS + REI +RD
Sbjct: 629 KVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDAN 688
Query: 662 RFHCFKDGRCSCGDY 676
RFH F +G CSC DY
Sbjct: 689 RFHHFNNGECSCRDY 703
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+R I N++V+ Y G +AR++FD MPE N VS N +++GY ++ + EA +F
Sbjct: 43 LRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVF 102
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E M E N+ +++ +++ G V E + F M E ++ M L
Sbjct: 103 EIMPERNV----VSWTAMVKGYVQEGMVVEAELLFWRMP-----ERNEVSWTVMFGGLID 153
Query: 484 AGKLTDAERLIEAMP 498
G++ DA +L + MP
Sbjct: 154 GGRIDDARKLYDMMP 168
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C L G+ +HA ++ Y+++ + +Y KCG L A F++ +
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD 396
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFK 120
+ +N +++ YA A ++F ++P P+ V+ +++A + G E L +F+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE 456
Query: 121 DMREK 125
M K
Sbjct: 457 SMESK 461
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 316/566 (55%), Gaps = 44/566 (7%)
Query: 148 IKQLHCLAIYCGFDHYASVNNS------LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+KQ+H +I H S+NN + T S + + A VF + + +WN+
Sbjct: 34 LKQIHAFSI----RHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN-PNVFTWNT 88
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ Y + A +++MV + D +T +L A + ++ G H+ I++G
Sbjct: 89 IIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNG 148
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
F + + L+ +YA C GD KVFE + + DLV WN+MI+G++ ++AL
Sbjct: 149 FESLVFVQNSLLHIYAAC-GDTESAYKVFELMKERDLVAWNSMINGFALNGR-PNEALTL 206
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F++++ G PD + V ++SA + L LG+++H +K+ + N V N+L+ +Y+
Sbjct: 207 FREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNS-HVTNSLLDLYA 265
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG + +A+R+F M E N VS S+I G A +G G EAL LF+ M + P+ ITFV
Sbjct: 266 KCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVG 325
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
VL AC+H G + EG +YF MK+ G P EHY CM+DLL RAG + A I+ MP
Sbjct: 326 VLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 385
Query: 501 PGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P ++ + A +H L LEP ++ YV+L+N+YA+ +W +V IR
Sbjct: 386 PNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIR 445
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--- 600
R M GV+K PG+S +E+ +++ F D SHP ++++ LE+++ +K GYVP
Sbjct: 446 RSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTA 505
Query: 601 ---------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIA 651
+KE+ L +HSEK+A+AF LL+T G PI VMKNLR+C DCH AIK I+ I
Sbjct: 506 NVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIY 565
Query: 652 GREITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD RFH F+ G CSC DYW
Sbjct: 566 DREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 135/246 (54%), Gaps = 8/246 (3%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
VF N LL YA SA ++F+ + + DLV++N++I+ +A G AL+LF++M
Sbjct: 153 VFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSV 212
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + DGFT+ L++AS+ L L +++H + G + V NSLL Y++ G + E
Sbjct: 213 EGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIRE 272
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+RVF EM E ++ VSW S++V + G EAL+LF+EM L T +L A +
Sbjct: 273 AQRVFSEMSE-RNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACS 331
Query: 243 SLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
L G ++ + + + H G ++DL ++ +G ++ + + +P QP+ V
Sbjct: 332 HCGMLDEGFEYFRRMKEECGIIPRIEHYGC-MVDLLSR-AGLVKQAYEYIQNMPVQPNAV 389
Query: 300 LWNTMI 305
+W T++
Sbjct: 390 IWRTLL 395
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ +H LK + +++++N + LY+KCG + A F++ N S+ L+
Sbjct: 235 LELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVG 294
Query: 75 YARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMREK 125
A A +LF ++ P +++ ++ A + CG + F+ M+E+
Sbjct: 295 LAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEE 349
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 221/625 (35%), Positives = 338/625 (54%), Gaps = 60/625 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L TC DL G H++ +K + + ++ N + +Y+KCG L
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALE--------- 480
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
ARQ+F+ + D VS+NT+I Y + A LF
Sbjct: 481 ----------------------DARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFM 518
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M +DG L+ + A +N L KQ+HCL++ CG D +SL+ YS+ G
Sbjct: 519 RMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCG 578
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A++VF M E VS N+++ Y Q+ EA+ LFQEM++ + T A+I+
Sbjct: 579 IIEDARKVFSSMPEWS-VVSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPSEITFATIV 636
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH-QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP- 296
A E L G QFH +IK GF + ++G L+ LY S M + +F E+ P
Sbjct: 637 EACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMN-SRRMAEACALFSELSSPK 695
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+VLW M+SG+SQ Y ++AL +K++ G PD +FV V+ CS LS G+ I
Sbjct: 696 SIVLWTGMMSGHSQNGFY-EEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH-NTVSLNSMIAGYAQHG 414
H+L + + ++ +N L+ MY+KCG+++ + ++FD M N VS NS+I GYA++G
Sbjct: 755 HSLIFHLAHDLDELT-SNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+AL++F+ M +++I P ITF+ VL+AC+H GKV++G+K F MM +G E +H
Sbjct: 814 YAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEP 517
+CM+DLLGR G L +A+ IEA P + AA ++LEP
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEP 933
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N+ YV+L+NIYA+ G+WEE +R+ MRDRGV+K PG+SWI+V ++ H+F A D SH
Sbjct: 934 QNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHS 993
Query: 578 MIKEIHNYLEEMSRKMKQAGYV-PD 601
I +I +LE++ MK V PD
Sbjct: 994 DIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/589 (29%), Positives = 288/589 (48%), Gaps = 62/589 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL T ++ G+ +H +K + ++Y + +Y+KC L A F+
Sbjct: 162 TFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGI 221
Query: 61 QHANVFSFNVLLAAYAR------------QLR-----------------------IASAR 85
N + L + Y + ++R + AR
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDAR 281
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--N 143
LF ++P PD+V++N +IS + G A+ F +MR+ + TL +++A
Sbjct: 282 LLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
NL L +H AI G V +SL++ YS+ ++ A +VF + E +++V WN+M+
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE-RNDVLWNAMI 400
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
Y + E + ++LF +M S +D +T S+L+ DL G QFH+ +IK
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLT 460
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+N +G+ L+D+YAKC G + D ++FE + D V WNT+I GY Q E S +A F
Sbjct: 461 KNLFVGNALVDMYAKC-GALEDARQIFEHMCDRDNVSWNTIIGGYVQDENES-EAFDLFM 518
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
++N G D + AC+N+ GKQ+H L++K + + ++L+ MYSKC
Sbjct: 519 RMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGL-DRVLHTGSSLIDMYSKC 577
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G +EDAR++F MPE + VS+N++IAGY+Q+ + EA+ LF+ ML + P+ ITF +++
Sbjct: 578 GIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIV 636
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
AC + G ++ + +GF EGE+ I LLG ++ R+ EA
Sbjct: 637 EACHKPESLTLGTQFHGQIIK-WGFSSEGEYLG--ISLLGL---YMNSRRMAEACAL--- 687
Query: 503 SIALKAANHFLQL-EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
F +L P + V + + + ++ +G +EE + MR G
Sbjct: 688 ---------FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 246/489 (50%), Gaps = 26/489 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N++ + L++ Y++ ++ +A ++F+ + + + V +N +I YA G++ + LF DM
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDM 419
Query: 123 REKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ ++ D FT + L++ A S++L + Q H + I V N+L+ Y++ G L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGAL 479
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++A+++F M + +D VSWN+++ Y Q EA LF M S + D LAS L A
Sbjct: 480 EDARQIFEHMCD-RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKA 538
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
T++ L G Q H +K G + H GS LID+Y+KC G + D KVF +P+ +V
Sbjct: 539 CTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKC-GIIEDARKVFSSMPEWSVVS 597
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
N +I+GYSQ ++A+ F+++ G +P + +F ++ AC S +LG Q H
Sbjct: 598 MNALIAGYSQNN--LEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGME 418
IK S + +L+ +Y + +A LF + ++ L M++G++Q+G E
Sbjct: 656 IKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL+ ++ M P TFV+VL C+ + EG+ S++ + + + + +I
Sbjct: 716 ALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL-AHDLDELTSNTLI 774
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
D+ + G + + ++ + M SN V + L N YA +G E+
Sbjct: 775 DMYAKCGDMKSSSQVFDEMR-----------------RRSNVVSWNSLINGYAKNGYAED 817
Query: 539 VATIRRLMR 547
I MR
Sbjct: 818 ALKIFDSMR 826
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 236/554 (42%), Gaps = 108/554 (19%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH------------ 62
L GK++H+ L + L N + LY+KC +S A FN +
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKDVTAWNSMLSMY 135
Query: 63 ----------------------ANVFSFNVLLAAYARQLRIASARQL------------- 87
N F+F+++L+ AR+ + RQ+
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNS 195
Query: 88 ----------------------FDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
FD I P+ V + L S Y G E A+ +F+ MR +
Sbjct: 196 YCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGE 255
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
DH A V +++ Y G L +A+
Sbjct: 256 GHRP-------------------------------DHLAFV--TVINTYISLGKLKDARL 282
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F EM D V+WN M+ +G+ + A++ F M + TL S+L+A +
Sbjct: 283 LFGEMPS-PDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+L GL HA IK G N ++GS L+ +Y+KC M KVFE + + + VLWN MI
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE-KMEAAAKVFEALEERNDVLWNAMI 400
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEI 364
GY+ E S + + F + GY+ DD +F ++S C+ + +G Q H++ IK ++
Sbjct: 401 RGYAHNGE-SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKL 459
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
N + V NALV MY+KCG LEDAR++F+ M + + VS N++I GY Q EA LF
Sbjct: 460 TKN-LFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFM 518
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M I S L AC + + +G++ + G + S +ID+ +
Sbjct: 519 RMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKC-GLDRVLHTGSSLIDMYSKC 577
Query: 485 GKLTDAERLIEAMP 498
G + DA ++ +MP
Sbjct: 578 GIIEDARKVFSSMP 591
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 238/697 (34%), Positives = 354/697 (50%), Gaps = 104/697 (14%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM--REKRFDTDGFTLSGL 137
R+ AR +FD +P + S+ +ISAY G + AL L++ + D F S +
Sbjct: 7 RLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSSV 66
Query: 138 ITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ A + CL + ++H + G + N+L+T Y++ G +D AK+VF + +D
Sbjct: 67 LAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITH-RD 125
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQL------------------GLDMY----- 232
VSWN+MV A + AL+++QEMVS + L++Y
Sbjct: 126 VVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL 185
Query: 233 -------TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--- 282
TLA++L A T L DL G I+SG +++ +G+ L++LYA+ GD
Sbjct: 186 SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYAR-FGDVIA 244
Query: 283 --------MRD---------------------CMKVFEEIPQPDLVLWNTMISGYSQKEE 313
M+D K+F E+P ++ WN MI+G+ Q
Sbjct: 245 AREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGR 304
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVN 372
QAL F++++ G P ++ V+ AC+NL+ S LG+ I E + ISV
Sbjct: 305 -PKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFI--CDGMDEALAKDISVA 361
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N++ MY KCG E AR+ F M + VS ++IA Y+Q+G EAL +F M++ +
Sbjct: 362 NSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVE 421
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P IT ++ LSAC+H EG FS + D +G H+ C IDLLGRAG L DA
Sbjct: 422 PNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDA 481
Query: 491 ERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS---NAVPYVMLANIY 530
E LI MPF G++A + ANH +L+ S + PYVML+NIY
Sbjct: 482 ETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVMLSNIY 541
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A++G +R +R + +K PG S I +K Q + F + D +HP + +N L +
Sbjct: 542 ASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNELRRLF 601
Query: 591 RKMKQAGYVPDKE----------KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
+KMK+AGYVPD + L +HSEKLA+AFG+L+T + ++KNLR+C DC
Sbjct: 602 QKMKEAGYVPDTRIAEMEEEETEQSLSYHSEKLALAFGVLNTPPEASLCIVKNLRVCSDC 661
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
HN IKF+S R+I VRD RFH F++G CSC D W
Sbjct: 662 HNVIKFLSKHLNRKIAVRDATRFHHFENGFCSCRDCW 698
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 206/446 (46%), Gaps = 43/446 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C + L G +H +K V L N + +Y+KCG + A F++
Sbjct: 63 FSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRIT 122
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H +V S+N +++A A + A +++ ++ D++ ++T+ISA A G AL L+++
Sbjct: 123 HRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYRE 182
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVN------------ 167
M + TL+ ++ A + +L + AI G D A V
Sbjct: 183 MILS-VRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGD 241
Query: 168 --------------------NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
N+++T +++N +DEA+++F EM + K +SWN+M+ +G
Sbjct: 242 VIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPD-KSVISWNAMIAGFG 300
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
Q+ +AL+LF+ M L T S+L A +L G +F + ++
Sbjct: 301 QNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLG-RFICDGMDEALAKDIS 359
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + + ++Y KC G + F E+ D+V W +I+ YSQ YS +AL F+ + +
Sbjct: 360 VANSICNMYGKC-GLPELARQTFLEMTYRDVVSWTAIIAAYSQN-GYSSEALDIFRIMVQ 417
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA--MYSKCGN 384
G P+ + + +SACS+ + G I + + + + ++ L A + + G
Sbjct: 418 AGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGY 477
Query: 385 LEDARRLFDRMP-EHNTVSLNSMIAG 409
L+DA L +MP + V+ S+++
Sbjct: 478 LKDAETLITKMPFKAGAVAWTSLLSA 503
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 194/443 (43%), Gaps = 87/443 (19%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV--SLQLGLDM 231
Y G L++A+ VF M +++E SW ++ AY + EAL L++ +V S ++ D
Sbjct: 2 YRDCGRLEDARAVFDSM-PLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC------------ 279
+ +S+L A L+ L GL+ H ++K G Q+ + + L+ +YAKC
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDR 120
Query: 280 ------------------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+G + +K+++E+ D++ W+TMIS + + +AL
Sbjct: 121 ITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAG-HDREALEL 179
Query: 322 FKKLNRVGYHPDDCSFVCVISACS-------------------------------NLSPS 350
++++ + P+ + V++AC+ NL
Sbjct: 180 YREMI-LSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYAR 238
Query: 351 LGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G I A + + +R V+ NA+V +++ +++A +LF MP+ + +S N+MIAG
Sbjct: 239 FGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAG 298
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+ Q+G +AL LF M + P+ +T+ SVL ACA+ + G+ M + +
Sbjct: 299 FGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEALAKDI 358
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANI 529
+ C ++ G+ G + A FL++ + V + +
Sbjct: 359 SVANSIC--NMYGKCG------------------LPELARQTFLEMTYRDVVSWTAIIAA 398
Query: 530 YAASGKWEEVATIRRLMRDRGVQ 552
Y+ +G E I R+M GV+
Sbjct: 399 YSQNGYSSEALDIFRIMVQAGVE 421
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 184/433 (42%), Gaps = 47/433 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA-FNQ 59
T VL C DL +G + +++ + A + + LY++ G + AA F+
Sbjct: 193 TLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDS 252
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ V S+N ++ A+A+ R+ A +LF ++P ++S+N +I+ + G + AL LF
Sbjct: 253 MKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQALELF 312
Query: 120 KDMREKRFDTDGFTLSGLITASSN-NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ M + T ++ A +N + + C + SV NS+ Y + G
Sbjct: 313 RRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEALAKDISVANSICNMYGKCG 372
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A++ F EM +D VSW +++ AY Q+ EAL +F+ MV + + TL + L
Sbjct: 373 LPELARQTFLEM-TYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVEPNGITLINTL 431
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH----QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+A + G + L+ ++ SH IDL + +G ++D + ++P
Sbjct: 432 SACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCA-IDLLGR-AGYLKDAETLITKMP 489
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH---------PDDCSFVCVISAC 344
+ V W +++S + K+ RV H D +V +
Sbjct: 490 FKAGAVAWTSLLSACRTFRD--------LKRAGRVANHLFELDESSIKDPAPYVML---- 537
Query: 345 SNLSPSLGKQIHALTIKIEIR---------SNRISVNNALVAMYS-------KCGNLEDA 388
SN+ S G + + ++ +IR + I++ YS + +
Sbjct: 538 SNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNEL 597
Query: 389 RRLFDRMPEHNTV 401
RRLF +M E V
Sbjct: 598 RRLFQKMKEAGYV 610
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE--TNIPPTN 435
MY CG LEDAR +FD MP N S +I+ Y G EAL L+ ++ T I
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 436 ITFVSVLSACAHTGKVAEG 454
F SVL+ACA + +G
Sbjct: 61 FIFSSVLAACARLKCLEQG 79
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 233/655 (35%), Positives = 347/655 (52%), Gaps = 90/655 (13%)
Query: 71 LLAAYARQLRIASARQLFDQ--------IPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
L+ Y++ + SAR LFD P+ NT++ AYA+ G + A+ L+ M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + FT ++ ++ L + + +H + GF V +L+ Y++ G +
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A VF M I+D V W +M+ Y Q L+AL LF++M D T S+ +A
Sbjct: 184 GDAHEVFDRM-LIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK----VFEEIPQP 296
L GD R + VF+ + +
Sbjct: 243 VGQL------------------------------------GDGRMAISRARLVFDRMEER 266
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
+ + WN+M+SGY+Q +D AL F ++ P+ + + ++SACS L S LG+++
Sbjct: 267 NGISWNSMLSGYTQNGRPTD-ALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKL 325
Query: 356 HALTI--KIEIRSNRISVNNALVAMYSKCGNLEDARRLFD--RMPEHNTVSLNSMIAGYA 411
H I K++I + ++ NA++ MY KCG+L+ A +F+ + E + S N +I+GY
Sbjct: 326 HNFVISSKMDIDT---TLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYG 382
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG G EAL LF M + P +ITF S+LSAC+H G + EG+K F+ M + PE
Sbjct: 383 VHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEM 441
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSIALK------------AANHFLQ 514
+HY+CM+D+LGRAG L +A RLI+ +P P G++ L AAN+ Q
Sbjct: 442 KHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQ 501
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP + YV+++NIYAAS KW+EV +R+ M+ RG++K FS IE ++H F D
Sbjct: 502 LEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQ 561
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLST 622
S P +E++ +E ++ +MK GYVPD KE L +HSEKLAVAFG++
Sbjct: 562 SSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKM 621
Query: 623 SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G PI V KNLR+C DCH A KFIS+I GR+I VRD RFH F+ GRCSCGDYW
Sbjct: 622 DQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 46/349 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C V G+ +H ++ ++ + +Y+KCG + AH F++
Sbjct: 134 TYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRM 193
Query: 61 QHANVFSFNVLLAAYARQLR---------------------------------------I 81
+V + ++ Y + R I
Sbjct: 194 LIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAI 253
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITAS 141
+ AR +FD++ + + +S+N+++S Y G ALSLF M+ D + T +++A
Sbjct: 254 SRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSAC 313
Query: 142 S--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY--EMGEIKDEV 197
S + L ++LH I D ++ N+++ Y + G LD A +F E+GE +D
Sbjct: 314 SYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGE-RDVS 372
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
SWN ++ YG H G EAL+LF M + + T SIL+A + + G + A +
Sbjct: 373 SWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM 432
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
K + ++D+ + +G + + ++ ++IP +P +W ++
Sbjct: 433 TKLSVRPEMKHYACMVDMLGR-AGFLNEAFRLIKKIPSRPSDEVWGALL 480
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 39/194 (20%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G+ LH + + + L N + +Y KCG L A FN +
Sbjct: 322 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCE---------------- 365
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
+ + D+ S+N LIS Y G + AL LF M+ + + + T + +
Sbjct: 366 -------------LGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSI 412
Query: 138 ITASSNNLCLIKQLHC------LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
++A S+ + + C L++ HYA + + L R GFL+EA R+ ++
Sbjct: 413 LSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDML----GRAGFLNEAFRLIKKIP 468
Query: 192 EIKDEVSWNSMVVA 205
+ W ++++A
Sbjct: 469 SRPSDEVWGALLLA 482
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 241/767 (31%), Positives = 371/767 (48%), Gaps = 94/767 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAH------ 54
T L++C R+ G AL K+ + L + I YSKCGC A+
Sbjct: 118 TLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177
Query: 55 ----------------------------HAFNQTQHA-NVFSFNVLLAA----------- 74
H QT A N F+F LLAA
Sbjct: 178 NNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKL 237
Query: 75 -----------------------YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
Y + I A ++ + D+ + +IS +
Sbjct: 238 VHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLK 297
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNS 169
A++ F +M + FT SG++ A S+ L L KQ+H + G ++ SV NS
Sbjct: 298 FREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNS 357
Query: 170 LLTCYSR-NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
L+ Y + + +++A R F + + +SW S++ + +H E++++F M + +
Sbjct: 358 LVDMYMKCSNMIEDAVRAFRGIAS-PNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVR 416
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ +TL++IL A +++ L + H ++IK+ + +G+ L+D YA G + D
Sbjct: 417 PNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGL-GMVDDAWH 475
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
V + D++ + ++ + +Q + + AL +N+ D S +SA + +
Sbjct: 476 VTSMMKHRDVITYTSLATRINQTGNH-EMALNIITHMNKDDVRMDGFSLASFLSAAAGIP 534
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
GKQ+H ++K + S ISV+N LV +Y KCG + DA R F + E + VS N +I
Sbjct: 535 IMETGKQLHCYSVKSGLGS-WISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLI 593
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
G A +G AL FE M + P IT + VL AC+H G V G YF M++ G
Sbjct: 594 FGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGI 653
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------AN 510
P+ +HY C++DLLGRAG+L +A +IE MPF P ++ K A
Sbjct: 654 RPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMAR 713
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
L+L+PS+ YV+LAN+Y SG+ E RR+MR+RGV+K PG SW+E + +H+F
Sbjct: 714 QGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFT 773
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
A D SHP I +IH +E + + + G + + L HHSEKLAVAFGL+ST PI +
Sbjct: 774 AGDTSHPQIGKIHEKIESLIAQFRNQGIWYQENRALAHHSEKLAVAFGLISTPPKAPIRI 833
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KN+RIC DCH+ I ++ + REI VRD RFH FK G CSC YW
Sbjct: 834 IKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 212/397 (53%), Gaps = 9/397 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F N LL+ Y + +A ARQLFD++P D+ S+ L+SAY G+ E AL LF M
Sbjct: 49 DMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSML 108
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ FTLS + + S + L GFD + ++L+ YS+ G
Sbjct: 109 ISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQ 168
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA RVF M D VSW MV ++ + +ALQL+ M+ + + +T +L A
Sbjct: 169 EAYRVFEYMNN-GDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAA- 226
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+S L G HAHL+ N + + L+D+Y KC + D +KV + + D+ LW
Sbjct: 227 SSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQ-SIEDAVKVSKLTLEYDVFLW 285
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTI 360
+ISG++Q ++ +A+ F ++ G P++ ++ +++ACS+ L+ LGKQIH+ +
Sbjct: 286 TAIISGFTQSLKFR-EAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVV 344
Query: 361 KIEIRSNRISVNNALVAMYSKCGNL-EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ N +SV N+LV MY KC N+ EDA R F + N +S S+IAG+++HG+ E+
Sbjct: 345 MAGLE-NDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEES 403
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+++F M + P + T ++L AC + + +K
Sbjct: 404 IKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRK 440
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
Y+L + +F + + G+ H+ +IK GF ++ + + L+ LY KC G + + ++F+
Sbjct: 16 YSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFG-VAEARQLFD 74
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
E+P D+ W ++S Y + + ++AL F + G +P++ + + +CS L +
Sbjct: 75 EMPCRDVASWTMLMSAYGKIGNH-EEALELFDSMLISGEYPNEFTLSTALRSCSALREFN 133
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G + AL K SN + + +AL+ YSKCG ++A R+F+ M + VS M++ +
Sbjct: 134 HGTRFQALVTKSGFDSNPV-LGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSF 192
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+ G +AL+L+ M++T + P TFV +L+A + G
Sbjct: 193 VEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG 231
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 40/253 (15%)
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
++W T +S K EYS K ++S C++ S G IH+
Sbjct: 1 MIWRTTVSKIPSKIEYS-----LLKD---------------IVSFCNSRSVRDGICIHSP 40
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK+ + + NN L+++Y KC + +AR+LFD MP + S +++ Y + G E
Sbjct: 41 IIKMGFQEDMFLSNN-LLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEE 99
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF+ ML + P T + L +C+ + G ++ +++ GF+ S +I
Sbjct: 100 ALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKS-GFDSNPVLGSALI 158
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
D + G +A R+ E M N G I V + M+ + + +G W +
Sbjct: 159 DFYSKCGCTQEAYRVFEYM--NNGDI----------------VSWTMMVSSFVEAGSWSQ 200
Query: 539 VATIRRLMRDRGV 551
+ M GV
Sbjct: 201 ALQLYHRMIQTGV 213
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 208/642 (32%), Positives = 342/642 (53%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL YA R A +F Q+P DL+S+N+L++++ + G + AL + M
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKS 460
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T + + A S + LH L + G + N+L++ Y + G + ++RV
Sbjct: 461 VNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRV 520
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
+M +D V+WN+++ Y ++ + +AL FQ + + + T+ S+L+A D
Sbjct: 521 LLQMPR-RDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGD 579
Query: 247 LVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L+ G HA+++ +GF + H+ + LI +YAKC GD+ +F + ++ WN ++
Sbjct: 580 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC-GDLSSSQDLFNGLDNRSIITWNAIL 638
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+ + + ++ L K+ G D SF +SA + L+ G+Q+H L +K+
Sbjct: 639 AANAH-HGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 697
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ + NA MYSKCG + + ++ + S N +I+ +HG E F
Sbjct: 698 ELDCF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFH 756
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
MLE I P ++TFVS+L+AC+H G V +G Y+ M+ FG EP EH C+IDLLGR+
Sbjct: 757 EMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRS 816
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G+L +AE I MP P + KAA + +LEP + +V+ +
Sbjct: 817 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSS 876
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N++A +G+WE+V +R+ M + ++KK SW+++K ++ F D +HP EI+ LE
Sbjct: 877 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 936
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + +K++GYV D KE L +HSE+LA+A+ L+ST G + + KNLR
Sbjct: 937 DIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLR 996
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IC DCH+ KF+S + GR I +RD YRFH F+ G CSC DYW
Sbjct: 997 ICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 236/495 (47%), Gaps = 42/495 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V+ +C +D G+ + +K+ + + N I ++ G + A++ FNQ +
Sbjct: 267 VISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERD 326
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLFKDMR 123
S+N ++AAYA+ I + ++F+ + + D V+ T+ + LS+ D+
Sbjct: 327 TISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTV----------STLLSVLGDVD 376
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+++ + +H L + GFD V N+LL Y+ G +EA
Sbjct: 377 HQKWG--------------------RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEA 416
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
VF +M KD +SWNS++ ++ L+AL + M+ ++ T S L A S
Sbjct: 417 DLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFS 475
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
E G H ++ SG N IG+ L+ +Y K G M +V ++P+ D+V WN
Sbjct: 476 PEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGG-MSTSRRVLLQMPRRDVVAWNA 534
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS----LGKQIHALT 359
+I GY++ E+ D+AL F+ L G + + V V+SAC L P GK +HA
Sbjct: 535 LIGGYAENED-PDKALAAFQTLRVEGVSANYITVVSVLSAC--LVPGDLLERGKPLHAYI 591
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ S+ V N+L+ MY+KCG+L ++ LF+ + + ++ N+++A A HG G E
Sbjct: 592 VSAGFESDE-HVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEV 650
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L+L M + +F LSA A + EGQ+ + + GFE + ++ D
Sbjct: 651 LKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-GFELDCFIFNAAAD 709
Query: 480 LLGRAGKLTDAERLI 494
+ + G++ + +++
Sbjct: 710 MYSKCGEIGEVVKML 724
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 228/491 (46%), Gaps = 50/491 (10%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
TG++LHAL +K LV S +N I +Y+K G
Sbjct: 76 TGRALHALCVKGLVRLSVLHTNTLINMYTKFG---------------------------- 107
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
R+ AR LFD++P + VS+NT++S G + F+ M + F ++
Sbjct: 108 ---RVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIAS 164
Query: 137 LITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
L+TA + + + Q+H G V+ ++L Y G + +++VF EM +
Sbjct: 165 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD- 223
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
++ VSW S++V Y E E + +++ M + + +++ ++++ L+D G Q
Sbjct: 224 RNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQI 283
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
+IKSG + + LI ++ G++ +F +I + D + WN++++ Y+Q
Sbjct: 284 IGQVIKSGLESKLAVENSLISMFGNM-GNVDYANYIFNQISERDTISWNSIVAAYAQNG- 341
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVN 372
+ +++ F + R + + ++S ++ G+ IH L +K+ S + V
Sbjct: 342 HIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDS-VVCVC 400
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ MY+ G E+A +F +MP + +S NS++A + G ++AL + M+ T
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKS 460
Query: 433 PTNITFVSVLSAC-----AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+TF S L+AC G++ G ++ +F + G + ++ + G+ G +
Sbjct: 461 VNYVTFTSALAACFSPEFFDKGRILHG---LVVVSGLFDNQIIG---NALVSMYGKIGGM 514
Query: 488 TDAERLIEAMP 498
+ + R++ MP
Sbjct: 515 STSRRVLLQMP 525
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+ G+ +HAL +K +R + + N L+ MY+K G ++ AR LFD+MP N VS N+M++G
Sbjct: 75 TTGRALHALCVKGLVRLSVLH-TNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSG 133
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV-AEGQKYFSMMKDMFGFE 468
+ G+ +E + F+ M + I P++ S+++AC +G + EG + + G
Sbjct: 134 IVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS-GLL 192
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLAN 528
+ + ++ L G G ++ + ++ E MP N V + L
Sbjct: 193 SDVYVSTAILHLYGVYGLVSCSRKVFEEMP------------------DRNVVSWTSLMV 234
Query: 529 IYAASGKWEEVATIRRLMRDRGVQ 552
Y+ G+ EEV I + MR GV+
Sbjct: 235 GYSDKGEPEEVIDIYKSMRGEGVE 258
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 38/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C+ DL+ GK LHA + ++ N I +Y+KCG LS++ FN
Sbjct: 566 TVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 625
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ ++ ++N +LAA A G E L L
Sbjct: 626 LDNRSIITWNAILAANAHH-------------------------------GHGEEVLKLV 654
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR D F+ S ++A++ L +QLH LA+ GF+ + N+ YS+
Sbjct: 655 SKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKC 714
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + E ++ + SWN ++ A G+H E + F EM+ + + T S+
Sbjct: 715 GEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSL 773
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
LTA + + GL ++ + K G +IDL + SG + + ++P +
Sbjct: 774 LTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGR-SGRLAEAETFISKMPMK 832
Query: 296 PDLVLWNTMIS 306
P+ ++W ++++
Sbjct: 833 PNDLVWRSLLA 843
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 225/616 (36%), Positives = 347/616 (56%), Gaps = 46/616 (7%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG 159
N LI + G+ AL + +E + L L N+L LH I+ G
Sbjct: 51 NPLIQSLCKQGNLNQALQVLS--QEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDG 108
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
D + L+ YS +D A++VF + + V WN++ A G E L L+
Sbjct: 109 SDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYV-WNALFRALTLAGYGREVLDLY 167
Query: 220 QEMVSLQLGLDMYTLASILTA------FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
+ M + + D +T +L A F SL L+ G + H H+++ GF + HI + L+
Sbjct: 168 RRMNRIGVPSDRFTYTYVLKACVASEAFVSL--LLNGREIHGHILRHGFEGHVHIMTTLL 225
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK--LNRVGYH 331
D+YA+ G + + +VF+++P ++V W+ MI+ YS K +AL F+K L
Sbjct: 226 DMYARF-GCVLNASRVFDQMPVKNVVSWSAMIACYS-KNGKPLEALELFRKMMLENQDLL 283
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
P+ + V V+ AC+ L+ GK +H ++ + S + V +ALV +Y++CGNLE R
Sbjct: 284 PNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSI-LPVVSALVTVYARCGNLELGHR 342
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+F+RM + + VS NS+I+ Y HG G +A+++F+ M++ + P+ I+FVSVL AC+H G
Sbjct: 343 VFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGL 402
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-------- 502
V EG+ F M P EHY+CM+DLLGRA +L +A ++I+ M PG
Sbjct: 403 VEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLL 462
Query: 503 ---------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
+A +A + +LEP+NA YV+LA+IYA + W EV ++ L+ RG+QK
Sbjct: 463 GSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQK 522
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------ 601
PG S IE++++++ F++ D +P I+++H L ++S +MK+ GYVPD
Sbjct: 523 VPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEE 582
Query: 602 KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
KE+ ++ HSEKLA+AFGL+++ GE I + KNLR+C DCH+ KFIS A REI VRD
Sbjct: 583 KERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVN 642
Query: 662 RFHCFKDGRCSCGDYW 677
RFH F+DG CSCGDYW
Sbjct: 643 RFHLFQDGVCSCGDYW 658
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H +V LL YAR + +A ++FDQ+P ++VS++ +I+ Y+ G
Sbjct: 208 HILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLE 267
Query: 115 ALSLFKDMREKRFD--TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
AL LF+ M + D + T+ ++ A + L K +H + G D V ++L
Sbjct: 268 ALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSAL 327
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+T Y+R G L+ RVF M E +D VSWNS++ +YG H G +A+Q+F+EM+ L
Sbjct: 328 VTVYARCGNLELGHRVFERM-EKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPS 386
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
+ S+L A + HA L++ G
Sbjct: 387 PISFVSVLGACS-----------HAGLVEEG 406
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA- 76
GK +H L+ + + + + +Y++CG L H F + + +V S+N L+++Y
Sbjct: 305 GKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGI 364
Query: 77 ---RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ I +++ DQ P +S+ +++ A + G E LF+ M
Sbjct: 365 HGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESM 413
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 312/556 (56%), Gaps = 30/556 (5%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD-EVSWNSMVVAYG 207
KQLHC G V SL++ Y + +D A+++F E + + V +NS++ Y
Sbjct: 30 KQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYA 89
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ + + LF EM L + ++ T+ ++ +L G+ H +K G +S
Sbjct: 90 LNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSS 149
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+G+ L+ +Y K SG++ K+F+E+P+ L+ WN MI+GY+Q ++ L +K++
Sbjct: 150 VGNCLLTMYVK-SGEIDCGRKLFDEMPRKGLITWNAMINGYAQNG-LANNVLELYKEMES 207
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G+ PD + V V+S+C++L S+GK++ SN +NNALV MY++CGNL+
Sbjct: 208 KGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPF-LNNALVNMYARCGNLK 266
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
AR +FD MP + VS ++I GY HG G A+ LF+ M+ I P FVSVLSAC+
Sbjct: 267 KARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACS 326
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
H G +G YF +M+ +G P EHYSCM+DLLGRAG+L +A LIE+M
Sbjct: 327 HAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALW 386
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A A ++LEP+N YV+L+N+Y +G E + +R LMR R
Sbjct: 387 GALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKR 446
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--DKEKR-- 605
++K PG S++E K ++H+F A D +HP EI+ L E+ +K D E+R
Sbjct: 447 KLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKKNDHERREE 506
Query: 606 ----LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTY 661
+ HSEKLAVAF LL+T I+++KNLRICGDCH IK +S I R+ VRD
Sbjct: 507 YLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDAT 566
Query: 662 RFHCFKDGRCSCGDYW 677
RFH FK+G CSC +YW
Sbjct: 567 RFHHFKNGFCSCKEYW 582
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 201/448 (44%), Gaps = 40/448 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K+C +TGK LH K ++ I +Y KC + A F++
Sbjct: 12 TFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDEN 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + V YN+L+S YA + + LF
Sbjct: 72 PQSRKLT-----------------------------VCYNSLLSGYALNSRVKDVVVLFC 102
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MRE + +G T+ GL+ NL L +H + G D +SV N LLT Y ++G
Sbjct: 103 EMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSG 162
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D +++F EM K ++WN+M+ Y Q+ L+L++EM S D TL +L
Sbjct: 163 EIDCGRKLFDEMPR-KGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVL 221
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ L L G + + GF N + + L+++YA+C G+++ +F+ +P +
Sbjct: 222 SSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARC-GNLKKARDIFDGMPVKSV 280
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V W +I GY + + A+G F ++ R G PD +FV V+SACS+ L+
Sbjct: 281 VSWTAIIGGYGMHGQ-GEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFG 339
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
+ K +R + +V + + G L +AR L + M +L + G +
Sbjct: 340 VMERKYGLRPGAEHY-SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRN 398
Query: 417 MEALRL-FEWMLETNIPPTNITFVSVLS 443
+E L FE ++E + PTN + +LS
Sbjct: 399 VELAELAFEQVIE--LEPTNTGYYVLLS 424
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 138/274 (50%), Gaps = 11/274 (4%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ +T + + +L + G Q H H+ K+G + + LI +Y KCS + + K+
Sbjct: 9 NAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCS-LIDNARKL 67
Query: 290 FEEIPQPD--LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC--- 344
F+E PQ V +N+++SGY+ D + F ++ +G + + + ++ C
Sbjct: 68 FDENPQSRKLTVCYNSLLSGYALNSRVKDVVV-LFCEMRELGVEINGVTMLGLVQPCGIP 126
Query: 345 SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
NL LG +H +K + + SV N L+ MY K G ++ R+LFD MP ++ N
Sbjct: 127 GNL--GLGMCVHGFCVKFGLDMDS-SVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWN 183
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI GYAQ+G+ L L++ M P +T V VLS+CAH G ++ G++ M+
Sbjct: 184 AMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEG- 242
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
FGF + ++++ R G L A + + MP
Sbjct: 243 FGFSSNPFLNNALVNMYARCGNLKKARDIFDGMP 276
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N F N L+ YAR + AR +FD +P +VS+ +I Y G E A+ LF +M
Sbjct: 247 SNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEM 306
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY-------CGFDHYASVNNSLLTCYS 175
DG +++A S+ K L + G +HY+ + + L
Sbjct: 307 IRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLL----G 362
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY--T 233
R G L+EA+ + M D W +++ A HR A F++++ L+ Y
Sbjct: 363 RAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVL 422
Query: 234 LASILTAFTSLEDLV 248
L+++ T +LE ++
Sbjct: 423 LSNVYTEAGNLEGIL 437
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 222/628 (35%), Positives = 332/628 (52%), Gaps = 53/628 (8%)
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN---NLCLI 148
P P +VSY IS A G ALS F M + FT A+++ +
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 149 KQLHCLAIYCGF---DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV-- 203
Q+H LAI G+ D + S + L Y + G L A+ +F EM ++ V+WN+++
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSC--AALDMYFKTGRLKLARHLFGEMPN-RNVVAWNAVMTN 194
Query: 204 -VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
V G+ E +EA +E L ++ + + A L G QFH ++K GF
Sbjct: 195 AVLDGRPLETIEAYFGLREAGGLP---NVVSACAFFNACAGAMYLSLGEQFHGFVVKCGF 251
Query: 263 HQNSHIGSGLIDLYAKC--SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
+ + + ++D Y KC +G R VF+ + + V W +M++ Y+Q ++A
Sbjct: 252 EMDVSVLNSMVDFYGKCRCAGKAR---AVFDGMGVRNSVSWCSMVAAYAQNGA-EEEAFA 307
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
+ R G P D ++ C+ L LG+ +HA+ ++ I +N I V +ALV MY
Sbjct: 308 AYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDAN-IFVASALVDMY 366
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITF 438
KCG +EDA ++F P+ N V+ N+MI GYA G AL +F+ M+ + P IT
Sbjct: 367 GKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITL 426
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
V+V+++C+ G +G + F M++ FG EP EHY+C++DLLGRAG A +I+ MP
Sbjct: 427 VNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMP 486
Query: 499 FNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + AA +L+P ++ +V+L+N++A++G+W E
Sbjct: 487 MRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATD 546
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
IR+ M++ G++K PG SW+ K +HVF A+D H M EI L ++ ++M+ AGY+PD
Sbjct: 547 IRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPD 606
Query: 602 KEKRL------------VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+ L HSEKLA+AFGL+ G PI +MKNLRIC DCH A KFIS
Sbjct: 607 TQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISG 666
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I GREI VRD RFH FK +CSCGDYW
Sbjct: 667 IVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 149/371 (40%), Gaps = 54/371 (14%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
C G L G+ H +K + N + Y KC C
Sbjct: 227 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRC---------------- 270
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
AR +FD + + VS+ ++++AYA G E A + + R
Sbjct: 271 ---------------AGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRS 315
Query: 126 RFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ F +S +T + L L + LH +A+ D V ++L+ Y + G +++A
Sbjct: 316 GEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDA 375
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFT 242
+++FYE + ++ V+WN+M+ Y + AL +F +M+ S + + TL +++T+ +
Sbjct: 376 EQIFYETPQ-RNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS 434
Query: 243 SLEDLVGGLQ------FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
GGL F + G + + ++DL + +G +V + +P +
Sbjct: 435 R-----GGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR-AGMEEQAYEVIQGMPMR 488
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
P + +W ++ + LG P D ++ SN+ S G+
Sbjct: 489 PSISVWGALLGACKM---HGKTELGRIAAEKLFELDPQDSGNHVLL---SNMFASAGRWA 542
Query: 356 HALTIKIEIRS 366
A I+ E+++
Sbjct: 543 EATDIRKEMKN 553
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Query: 342 SACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
SA ++ SP LG+ HA +++ + + LV +YSK A P V
Sbjct: 24 SAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVV 83
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S + I+G AQHG + AL F ML + P + TF S A A + +
Sbjct: 84 SYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSL 143
Query: 462 KDMFGFEPEGEHYSC-MIDLLGRAGKLTDAERLIEAMP 498
FG+ P SC +D+ + G+L A L MP
Sbjct: 144 AIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMP 181
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 208/527 (39%), Positives = 296/527 (56%), Gaps = 68/527 (12%)
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
L+ + M L L D +TL +L + L + G H ++ G + ++G+ LID+
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE---------------------- 313
Y KC G + D K+F+++ D+ WN +I+GY ++ E
Sbjct: 152 YVKC-GVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAM 210
Query: 314 --------YSDQALGCFKKLNRVG--YHPDDCSFVCVISACSNLSPSL--GKQIHALTIK 361
+++QALG F ++ + G P+ + V V+ AC+ S +L G++IH
Sbjct: 211 ISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ-SAALERGRRIHDFANG 269
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH--NTVSLNSMIAGYAQHGIGMEA 419
I + N SV AL MY+KC +L +AR FD + ++ N ++ N+MI YA HG G+EA
Sbjct: 270 IGLHLNS-SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 328
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ +FE ML + P +TF+ +LS C+H+G + G +F+ M + EP EHY+C++D
Sbjct: 329 VSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVD 388
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LLGRAG+L +A+ LI MP G IA AA LEP N+
Sbjct: 389 LLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGN 448
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA +G WEEV +R L++ +G++K PG SWIE+ + H+F+ D SHP KEI
Sbjct: 449 YVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEI 508
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ +LE + K+K AGY+PD KE L HSEKLA+AFGLL+T G + V
Sbjct: 509 YKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRV 568
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLRICGDCH A KFIS I REI VRD RFHCFKDG CSCGDYW
Sbjct: 569 TKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 153/324 (47%), Gaps = 30/324 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK+C + G+ +H L+ + Y+ I +Y KCG + A F++
Sbjct: 109 TLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM 168
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N L+A Y ++ I A LF+++ ++VS+ +IS Y G E AL LF
Sbjct: 169 IVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFD 228
Query: 121 DMRE--KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M + + T+ ++ A + + L +++H A G +SV +L Y++
Sbjct: 229 EMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAK 288
Query: 177 NGFLDEAKRVFYEMGEI-KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
L EA+ F + + K+ ++WN+M+ AY H G+EA+ +F+ M+ + D T
Sbjct: 289 CYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFM 348
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS------------GLIDLYAKCSGDM 283
+L+ + H+ LI +G + + +G+ ++DL + +G +
Sbjct: 349 GLLSGCS-----------HSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGR-AGRL 396
Query: 284 RDCMKVFEEIP-QPDLVLWNTMIS 306
+ ++ ++P Q +W +++
Sbjct: 397 VEAKELISQMPMQAGPSVWGALLA 420
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQ--PDLVSYNTLISAYADCGDTESALSLF 119
H N L YA+ + AR FD I Q +L+++NT+I+AYA G A+S+F
Sbjct: 273 HLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIF 332
Query: 120 KDMREKRFDTDGFTL---------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
++M D T SGLI A N+ + +H ++ +HYA V + L
Sbjct: 333 ENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIH--SVEPRVEHYACVVDLL 390
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G L EAK + +M W +++ A HR
Sbjct: 391 ----GRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHR 426
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 331/596 (55%), Gaps = 67/596 (11%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
S ++ + Q+H + G H +N L Y+ G LD + VF E + S+++
Sbjct: 57 SKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDE-PNVFSFSA 115
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
++ ++ Q R A + +M+S + + +T +S+L + SLE G H IK G
Sbjct: 116 IIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKS-CSLES---GKVLHCQAIKLG 171
Query: 262 FHQNSHIGSGLIDLYAK-----CS-------------------------GDMRDCMKVFE 291
+ ++ +GL+D+YA+ C+ G++ +FE
Sbjct: 172 LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFE 231
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ + D+V WN MI GY+Q +++L F+++ P++ + + V+SAC L
Sbjct: 232 GMKERDVVCWNVMIGGYAQSG-VPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALE 290
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+ IH+ I+ N + V AL+ MYSKCG+LEDAR +FDR+ + + V+ NSMI GY
Sbjct: 291 SGRWIHSYIENKGIQIN-VHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGY 349
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A HG AL+LFE M ET PT+ITF+ +LSAC H G V EG+ +F +M+D +G EP+
Sbjct: 350 AMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPK 409
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM-----PFNPGS------------IALKAANHFL 513
EHY CM++LLGRAG L +A L++ M P G+ + + A +
Sbjct: 410 IEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLV 469
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED 573
+ +N+ YV+L+N+YAA+G WE VA +R LM++ G++K+ G S IEV ++H FVA +
Sbjct: 470 DQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGE 529
Query: 574 GSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLS 621
HP KEI+ L E++ +K GY P KE+ L HSEKLA+AFGL+S
Sbjct: 530 RKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLIS 589
Query: 622 TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
T G + ++KNLR+C DCH +K IS I GR+I +RD RFH F+DG CSCGDYW
Sbjct: 590 TKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK+C L +GK LH +K + Y+ + +Y++ G + A F++
Sbjct: 147 TFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKM 202
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S +L Y++ + AR LF+ + + D+V +N +I YA G +L LF+
Sbjct: 203 PERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFR 262
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + T+ +++A L + +H G V +L+ YS+ G
Sbjct: 263 RMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCG 322
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L++A+ VF + + KD V+WNSM+V Y H ALQLF+EM T IL
Sbjct: 323 SLEDARLVFDRIRD-KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGIL 381
Query: 239 TA 240
+A
Sbjct: 382 SA 383
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 231/649 (35%), Positives = 343/649 (52%), Gaps = 88/649 (13%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V SF LL Y R +A A +LF Q+P+ + V+Y L+ + D G A LF +M
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMP 170
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN----NSLLTCYSRNGF 179
+K LSG A I + L FD N ++++ Y++NG
Sbjct: 171 DKDVVARTAMLSGYCQAGR-----ITEARAL-----FDEMPKRNVVSWTAMISGYAQNGK 220
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+++F M + ++EVSW +M+V Y Q +A LF M + +A+
Sbjct: 221 VILARKLFEVMPD-RNEVSWTAMLVGYIQAGHVEDAEDLFNAMPD-------HPVAA--- 269
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ + GF Q+ G++D AK +FE + D
Sbjct: 270 ---------------CNAMMVGFGQH-----GMVDA-AKA---------MFERMCARDDG 299
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHAL 358
W+ MI Y Q E + +AL F+++ G P+ SF+ +++ C+ L+ + G+++HA
Sbjct: 300 TWSAMIKVYEQNE-FLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAA 358
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
++ ++ +V+ AL+ MY KCGNL+ A+R+F+ + V NSMI GYAQHG+G E
Sbjct: 359 MLRCSFDTDVFAVS-ALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEE 417
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL +F+ + + P IT++ VL+AC++TGKV EG++ F+ M HYSCM+
Sbjct: 418 ALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMV 477
Query: 479 DLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPSNAV 521
DLLGRAG + +A LI MP P IA AA L+LEP +A
Sbjct: 478 DLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAG 537
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SHPMIK 580
PYV+L++IY ++G+WE+ + +R+ + R + K PG SWIE K +H+F + D SHP
Sbjct: 538 PYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHA 597
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
I N LEE+ + ++GY D K + L +HSE+ AVA+GLL G PI
Sbjct: 598 IILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPI 657
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
VMKNLR+CGDCH+AIK I+ I REI +RD RFH FKDG CSC DYW
Sbjct: 658 RVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 53/222 (23%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-- 430
NA +A + GN+E AR FD MP T S N++IAGY ++ + AL LF M +
Sbjct: 21 NARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLG 80
Query: 431 ---------------------------IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+PP+ ++F S+L G +A+ + F M
Sbjct: 81 SYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQM-- 138
Query: 464 MFGFEPEGEH--YSCMIDLLGRAGKLTDAERLIEAMP--------------FNPGSIALK 507
PE H Y+ ++ AG++ +A +L + MP G I +
Sbjct: 139 -----PERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRIT-E 192
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
A F ++ N V + + + YA +GK + +M DR
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR 234
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 42/235 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +L C G+ LHA L+ + + I +Y KCG L A FN
Sbjct: 335 SFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMF 394
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V +N ++I+ YA G E AL +F
Sbjct: 395 EPKDVVMWN-------------------------------SMITGYAQHGLGEEALGIFD 423
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
D+R R DG T G++TA S + + +I G HY+ + + L
Sbjct: 424 DLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLL--- 480
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
R G +DEA + M D + W +++ A H+ A ++++ L+ G
Sbjct: 481 -GRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPG 534
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 301/546 (55%), Gaps = 40/546 (7%)
Query: 166 VNNSLLTCYSRNGFLDE--AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+ N L+ YS+ LD + ++ + + V+W +++ Q+ AL F M
Sbjct: 44 IYNHLVNMYSK---LDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMR 100
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ + +T A SL + G Q HA +K+G + +G D+Y+K +G
Sbjct: 101 RDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSK-AGLT 159
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ K+F+E+P+ ++ WN +S + Y D AL F + + G P D V+SA
Sbjct: 160 EEARKMFDEMPERNIATWNAYLSNSVLEGRY-DDALTAFIEARKEGIEPTDFMVSSVLSA 218
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C+ LS +GK +H L +K + N I V +ALV MY KCG++EDA R FD MPE N V+
Sbjct: 219 CAGLSVLEVGKSVHTLAVKACVVGN-IFVGSALVDMYGKCGSIEDAERAFDEMPERNLVT 277
Query: 403 LNSMIAGYAQHGIGMEALRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
N+MI GYA G A+ LF+ M + P +TFV VLSAC+ G V G + F
Sbjct: 278 WNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFES 337
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GS 503
M+ +G EP EHY+C++DLLGRAG + A + I+ MP P
Sbjct: 338 MRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 397
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+ AA++ +L+P ++ +V+L+N++AA+G+WEE +R+ M+D G++K G SWI
Sbjct: 398 LGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG 457
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSE 611
+HVF A+D SH EI L ++ +M+ AGY+PD K + +HSE
Sbjct: 458 NAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSE 517
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
K+A+AFGL+S G PI + KNLRICGDCH+AIKFIS I GREI VRD FH F+D +C
Sbjct: 518 KIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQC 577
Query: 672 SCGDYW 677
SC DYW
Sbjct: 578 SCRDYW 583
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 28/362 (7%)
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F +N L+ Y++ R SA+ L P +V++ LI+ G SAL F +MR
Sbjct: 43 FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102
Query: 126 RFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ FT AS + + + KQ+H LA+ G V S YS+ G +EA
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162
Query: 184 KRVFYEMGEIKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+++F EM E ++ +WN+ + V G++ + L A F E + + ++S+L+A
Sbjct: 163 RKMFDEMPE-RNIATWNAYLSNSVLEGRYDDALTA---FIEARKEGIEPTDFMVSSVLSA 218
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
L L G H +K+ N +GS L+D+Y KC G + D + F+E+P+ +LV
Sbjct: 219 CAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKC-GSIEDAERAFDEMPERNLVT 277
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYH---PDDCSFVCVISACSNL-SPSLGKQIH 356
WN MI GY+ + + +D A+ F ++ G H P+ +FVCV+SACS S ++G +I
Sbjct: 278 WNAMIGGYAHQGQ-ADMAVTLFDEMT-CGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI- 334
Query: 357 ALTIKIEIRSNRISVNNA------LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
E R + +V + + G +E A + +MP TVS+ + G
Sbjct: 335 -----FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGA 389
Query: 411 AQ 412
++
Sbjct: 390 SK 391
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL C G L GKS+H L +K V + ++ + + +Y KCG + A AF++ N
Sbjct: 215 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 274
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP------QPDLVSYNTLISAYADCGDTESALSL 118
+ ++N ++ YA Q + A LFD++ P+ V++ ++SA + G + +
Sbjct: 275 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 334
Query: 119 FKDMREK 125
F+ MR +
Sbjct: 335 FESMRGR 341
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 325/559 (58%), Gaps = 35/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQLH + G + + L+ Y+ + L A+ +F ++ + ++ WN ++ Y
Sbjct: 67 KQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK-QNLFLWNVLIRGYAW 125
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ A+ L+ +M+ L D +TL +L A ++L + G H ++IKSG+ ++ +
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ LID+YAKC G + D +VF++I D VLWN+M++ Y+Q + D+++ +++
Sbjct: 186 GAALIDMYAKC-GCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNG-HPDESISLCREMAAN 243
Query: 329 GYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G P + + V VIS+ ++++ G++IH + +SN V AL+ MY+KCG+++
Sbjct: 244 GVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSND-KVKTALIDMYAKCGSVKV 302
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A LF+R+ E VS N++I GYA HG+ + AL LF+ M + + P +ITFV VL+AC+
Sbjct: 303 ALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSR 361
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---- 503
+ EG+ +++M +G P +HY+CMIDLLG G+L +A LI M P S
Sbjct: 362 GRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWG 421
Query: 504 -------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+A A ++LEP ++ YV+LAN+YA SGKWE V +R++M D+
Sbjct: 422 ALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKR 481
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
++K SWIEVK +++ F+A D SH I+ L+ + M +AGY PD
Sbjct: 482 IKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVE 541
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
K + HSE+LA+AFGL+STS G +L+ KNLRIC DCH AIKFIS I REITVR
Sbjct: 542 EDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVR 601
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D R+H FK G CSCGD+W
Sbjct: 602 DVNRYHSFKHGMCSCGDHW 620
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 5/267 (1%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
Y S+L + + L G Q HA G N + + L+ LYA S + + +F+
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYA-VSNSLLNARNLFD 106
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+IP+ +L LWN +I GY+ + D A+ + K+ G PD+ + V+ ACS LS
Sbjct: 107 KIPKQNLFLWNVLIRGYAWNGPH-DNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIG 165
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+ IH IK + + V AL+ MY+KCG + DA R+FD++ + V NSM+A Y
Sbjct: 166 EGRSIHEYVIKSGWERD-LFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAY 224
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
AQ+G E++ L M + PT T V+V+S+ A + G++ GF+
Sbjct: 225 AQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGW-RHGFQSN 283
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + +ID+ + G + A L E +
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERL 310
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ +H ++ + + I +Y+KCG + A F + + V S+N ++
Sbjct: 265 LPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITG 324
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
YA A LFD++ + D + T + A C
Sbjct: 325 YAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAAC 359
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 321/560 (57%), Gaps = 37/560 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQLH G + + L+ YS L A +F ++ + + WN ++ AY
Sbjct: 78 KQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK-GNLFLWNVLIRAYAW 136
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ A+ L+ +M+ L D +TL +L A ++L + G H +I+SG+ ++ +
Sbjct: 137 NGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFV 196
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ L+D+YAKC G + D VF++I D VLWN+M++ Y+Q + D++L ++
Sbjct: 197 GAALVDMYAKC-GCVVDARHVFDKIVDRDAVLWNSMLAAYAQNG-HPDESLSLCCEMAAK 254
Query: 329 GYHPDDCSFVCVISACSNLS--PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P + + V VIS+ ++++ P G++IH + + N V AL+ MY+KCG+++
Sbjct: 255 GVRPTEATLVTVISSSADIACLPH-GREIHGFGWRHGFQYND-KVKTALIDMYAKCGSVK 312
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A LF+R+ E VS N++I GYA HG+ +EAL LFE M++ P +ITFV L+AC+
Sbjct: 313 VACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACS 371
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
+ EG+ +++M P EHY+CM+DLLG G+L +A LI M P S
Sbjct: 372 RGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVW 431
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A A ++LEP ++ YV+LAN+YA SGKWE VA +R+LM D+
Sbjct: 432 GALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDK 491
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
G++K SWIEVK +++ F++ D SHP I+ L+ + M++AGYVPD
Sbjct: 492 GIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDV 551
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
K + HSE+LA+AFGL+ST G +L+ KNLRIC DCH AIKFIS I REITV
Sbjct: 552 EEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITV 611
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD R+H F+ G CSCGDYW
Sbjct: 612 RDVNRYHHFRHGLCSCGDYW 631
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 38/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C + G+ +H +++ ++ + +Y+KCGC
Sbjct: 161 TLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGC----------- 209
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR +FD+I D V +N++++AYA G + +LSL
Sbjct: 210 --------------------VVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCC 249
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K TL +I++S++ CL +++H GF + V +L+ Y++ G
Sbjct: 250 EMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCG 309
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A +F + E K VSWN+++ Y H +EAL LF+ M+ + D T L
Sbjct: 310 SVKVACVLFERLRE-KRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGAL 367
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + L G + +++ + + ++DL C G + + + ++ P
Sbjct: 368 AACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHC-GQLDEAYDLIRQMDVMP 426
Query: 297 DLVLWNTMIS 306
D +W +++
Sbjct: 427 DSGVWGALLN 436
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 225/622 (36%), Positives = 348/622 (55%), Gaps = 42/622 (6%)
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL 151
P N LI + G+ AL L E + L L N+L +++
Sbjct: 35 PTASTADNNKLIQSLCKQGNLTQALELLS--LEPNPAQHTYELLILSCTHQNSLLDAQRV 92
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
H + GFD + L+ YS +D A++VF + + +N++ A
Sbjct: 93 HRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVF-DKTRNRTIYVYNALFRALSLAGH 151
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG----GLQFHAHLIKSGFHQNSH 267
G E L +++ M S+ + D +T +L A + E V G + HAH+++ G+ H
Sbjct: 152 GEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVH 211
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-- 325
I + L+D+YAK G + + VF ++P ++V W+ MI+ Y+ K + +AL F++L
Sbjct: 212 IMTTLVDMYAKF-GCVSNASCVFNQMPVKNVVSWSAMIACYA-KNGKAFEALELFRELML 269
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
P+ + V V+ AC+ L+ G+ IH ++ + S + V +ALV MY++CG
Sbjct: 270 ETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDS-ILPVISALVTMYARCGK 328
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
LE +R+FD+M + + VS NS+I+ Y HG G +A+ +FE M + P+ I+FVSVL A
Sbjct: 329 LELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGA 388
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-- 502
C+H G V EG+ F+ M G P EHY+CM+DLLGRA +L +A ++IE M PG
Sbjct: 389 CSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPK 448
Query: 503 ---------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+A +A+ LEP+NA YV+LA+IYA +G W+ V +++L+
Sbjct: 449 VWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLE 508
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
RG+QK PG SWIEVK++++ FV+ D +P ++++H L ++S ++K+ GYVP
Sbjct: 509 ARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLY 568
Query: 601 -----DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
+KE+ ++ HSEKLAVAFGL+++S GE I + K+LR+C DCH+ KFIS A +EI
Sbjct: 569 DLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEI 628
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F+DG CSCGDYW
Sbjct: 629 LVRDVNRFHHFRDGVCSCGDYW 650
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 37/312 (11%)
Query: 1 TFRQVLKTCVGRRDLVT----GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T+ VLK CV V+ G+ +HA L++ ++ + +Y+K GC+S A
Sbjct: 173 TYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 232
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
FNQ NV S++ ++A YA+ + A +LF ++ ++ C ++ + +
Sbjct: 233 FNQMPVKNVVSWSAMIACYAKNGKAFEALELFREL----------MLETQDLCPNSVTMV 282
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S+ + G + G I G D V ++L+T Y+R
Sbjct: 283 SVLQACAALAALEQGRLIHGYILRK-----------------GLDSILPVISALVTMYAR 325
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+ +RVF +M + +D VSWNS++ +YG H G +A+ +F+EM + + S
Sbjct: 326 CGKLELGQRVFDQMDK-RDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVS 384
Query: 237 ILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L A S LV G + F++ + G + + ++DL + + + + K+ E +
Sbjct: 385 VLGA-CSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGR-ANRLEEAAKIIENMR 442
Query: 295 -QPDLVLWNTMI 305
+P +W +++
Sbjct: 443 IEPGPKVWGSLL 454
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 234/702 (33%), Positives = 353/702 (50%), Gaps = 119/702 (16%)
Query: 15 LVTGKSLHALYLKNL------VPFSAYLSNHFILL--YSKCGCLSAAHHAFNQTQHANVF 66
L++G SL L + +PF + + LL Y + G L+ A F Q N
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV 144
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
S+ VLL R+ AR+LFD++P D+V++ ++S Y G A +LF +M ++
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 127 FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ +SG Y++NG ++ A+++
Sbjct: 205 VVSWTAMISG-------------------------------------YAQNGEVNLARKL 227
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M E ++EVSW +M+V Y Q +A +LF M + +A+
Sbjct: 228 FEVMPE-RNEVSWTAMLVGYIQAGHVEDAAELFNAMPE-------HPVAA---------- 269
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ + GF Q G++D VFE++ + D W+ MI
Sbjct: 270 --------CNAMMVGFGQR-----GMVDA----------AKTVFEKMRERDDGTWSAMIK 306
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q E + +AL F+++ G P+ S + +++ C+ L+ G+++HA ++
Sbjct: 307 AYEQNE-FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFD 365
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ +V+ AL+ MY KCGNL+ A+R+F + V NSMI GYAQHG+G +AL +F
Sbjct: 366 MDVFAVS-ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + P IT++ L+AC++TGKV EG++ F+ M P EHYSCM+DLLGR+G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 486 KLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPSNAVPYVMLAN 528
+ +A LI+ MP P IA AA L+LEP NA PYV+L++
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSH 544
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SHPMIKEIHNYLE 587
IY + G+WE+ + +R+ + R + K PG SWIE K++H+F + D +HP I LE
Sbjct: 545 IYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILE 604
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + ++GY D K L +HSE+ AVA+GLL G PI VMKNLR
Sbjct: 605 KLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH+AIK I+ I REI +RD RFH FKDG CSC DYW
Sbjct: 665 VCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
+ +F +P DL +N +ISG S + + A L + + P SF ++
Sbjct: 67 ALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAA---LASIPFPPSVVSFTSLLRGYV 123
Query: 346 NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
G A+ + ++ L+ G + +ARRLFD MP+ + V+ +
Sbjct: 124 RH----GLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTA 179
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
M++GY Q G EA LF+ M + N+ +++ +++S A G+V +K F +M
Sbjct: 180 MLSGYCQAGRITEARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVM---- 231
Query: 466 GFEPEGEHYSCMIDLLG--RAGKLTDAERLIEAMPFNP 501
PE S L+G +AG + DA L AMP +P
Sbjct: 232 ---PERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 44/251 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C L G+ +HA L+ + + I +Y KCG L A F+ +
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE--- 395
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
P+ D+V +N++I+ YA G E AL +F DMR
Sbjct: 396 ---------------------------PK-DIVMWNSMITGYAQHGLGEQALGIFHDMRL 427
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSRN 177
DG T G +TA S + + +I G +HY+ + + L R+
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL----GRS 483
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTLAS 236
G ++EA + M D V W +++ A HR A ++++ L+ G Y L S
Sbjct: 484 GLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLS 543
Query: 237 -ILTAFTSLED 246
I T+ ED
Sbjct: 544 HIYTSVGRWED 554
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 38/157 (24%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI- 431
NA +A ++ GN+E AR F+ MP T S N+++AGY ++ + AL LF M ++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 432 ----------------------------PPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
PP+ ++F S+L G +A+ + F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 464 MFGFEPEGEH--YSCMIDLLGRAGKLTDAERLIEAMP 498
PE H Y+ ++ L AG++ +A RL + MP
Sbjct: 139 -----PERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 314/562 (55%), Gaps = 37/562 (6%)
Query: 149 KQLHCLAIYCG-FDHYASVNNSLLTC-YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
KQ H + G F +N + TC S G +D A +F +M E +N+M+ +
Sbjct: 5 KQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDE-PGSFZFNTMMRGH 63
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ EAL ++EM + D +T ++L A L + G+Q HAH++K G +
Sbjct: 64 VKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDV 123
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ + LI +Y KC G++ C VFE++ + + W+ +I+ ++ +SD L ++
Sbjct: 124 FVQNSLISMYGKC-GEIGVCCAVFEQMNERSVASWSALITAHASLGMWSD-CLRLLGDMS 181
Query: 327 RVGY-HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
GY ++ V V+SAC++L LG+ +H ++ + + V +L+ MY KCG
Sbjct: 182 NEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLR-NVSGLNVIVETSLIEMYLKCGX 240
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L LF +M + N +S + MI+G A HG G E LR+F MLE + P +I +V VL+A
Sbjct: 241 LYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNA 300
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
C+H G V EG + F+ MK G EP +HY CM+DL+GRAGK+ +A LI++MP P +
Sbjct: 301 CSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV 360
Query: 505 ALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ AA +L+ A YV+L+N+YA + +WE+VA R M
Sbjct: 361 LWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMF 420
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------ 601
+G+ ++PGFS +EVK++MH FV++D HP + ++ L +M ++K GY PD
Sbjct: 421 SKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLC 480
Query: 602 ------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
K++RL HS+KLA+A+ L+ TS G P+ +++NLR+C DCH K IS I REI
Sbjct: 481 DVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREI 540
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
TVRD +RFH FKDG CSC DYW
Sbjct: 541 TVRDRHRFHHFKDGACSCRDYW 562
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 28/342 (8%)
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC 146
+F Q+ +P +NT++ + +TE AL +K+M E+ D FT L+ A +
Sbjct: 44 IFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPA 103
Query: 147 LIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
+ + Q+H + G ++ V NSL++ Y + G + VF +M E + SW++++
Sbjct: 104 VEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNE-RSVASWSALIT 162
Query: 205 AYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
A+ + L+L +M + + L S+L+A T L L G H L+++
Sbjct: 163 AHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSG 222
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
N + + LI++Y KC G + M +F+++ + + + ++ MISG + Y + L F
Sbjct: 223 LNVIVETSLIEMYLKC-GXLYKGMCLFQKMAKKNKLSYSVMISGLAM-HGYGREGLRIFT 280
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS-NRISVNNA-------- 374
++ G PDD +V V++ACS HA ++ ++ NR+ + +
Sbjct: 281 EMLEQGLEPDDIVYVGVLNACS----------HAGLVQEGLQCFNRMKLEHGIEPTIQHY 330
Query: 375 --LVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+V + + G +++A L MP E N V S+++ H
Sbjct: 331 GCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVH 372
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 38/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +LK C + G +HA LK + ++ N I +Y KCG + F Q
Sbjct: 90 TYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQM 149
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S++ L+ A+A + ++DC L L
Sbjct: 150 NERSVASWSALITAHAS-------------------------LGMWSDC------LRLLG 178
Query: 121 DM-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
DM E + + L +++A ++ L L + +H + V SL+ Y +
Sbjct: 179 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKC 238
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L + +F +M + K+++S++ M+ H G E L++F EM+ L D +
Sbjct: 239 GXLYKGMCLFQKMAK-KNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGV 297
Query: 238 LTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
L A + + GLQ F+ ++ G ++DL + +G + + +++ + +P +
Sbjct: 298 LNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGR-AGKIDEALELIKSMPME 356
Query: 296 PDLVLWNTMISG 307
P+ VLW +++S
Sbjct: 357 PNDVLWRSLLSA 368
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 213/540 (39%), Positives = 305/540 (56%), Gaps = 34/540 (6%)
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
+L+T Y G LD+A+R+F E+ +KD VSWN+M+ Y Q EA+ F EM +
Sbjct: 202 ALITGYVSQGCLDDARRLFDEI-PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+ T+ +L+A G + + +GF N + + LID+Y KC G+ +
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKC-GETDIARE 319
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F+ I + D++ WNTMI GYS Y ++AL F+ + R P+D +F+ ++ AC+ L
Sbjct: 320 LFDGIEEKDVISWNTMIGGYSYLSLY-EEALALFEVMLRSNVKPNDVTFLGILHACACLG 378
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LGK +HA K S+ S+ +L+ MY+KCG +E A R+F M N S N+M+
Sbjct: 379 ALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAML 438
Query: 408 AGYAQHGIGMEALRLFEWMLETNI-PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+G+A HG AL LF M+ + P +ITFV VLSAC G V G +YF M +G
Sbjct: 439 SGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYG 498
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI--ALKA----------A 509
P+ +HY CMIDLL RA K +AE L++ M P GS+ A KA A
Sbjct: 499 ISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVA 558
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
QLEP NA +V+L+NIYA +G+W++VA IR + D+G++K PG + IE+ +H F
Sbjct: 559 ERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEF 618
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ D HP I+ L E+ + +++ G+VP+ KE L HSEKLA++F
Sbjct: 619 LVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISF 678
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ T G I ++KNLR+CG+CH+A K IS I REI RD RFH FKDG CSC D W
Sbjct: 679 GLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 184/389 (47%), Gaps = 37/389 (9%)
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLL--TCYSRNGFLDEAKRVFYEMGE--IKDEVSW 199
N+ KQ+H L I G ++ V + L+ S +G L A +F E + + W
Sbjct: 40 NINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIW 99
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ Y L +L LF M+ + + +T + + T + G Q HAH +K
Sbjct: 100 NSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALK 159
Query: 260 SGFHQNSHIGSGLIDLYAKCS------------------------------GDMRDCMKV 289
H N H+ + +I +YA G + D ++
Sbjct: 160 LALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRL 219
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-S 348
F+EIP D+V WN MISGY Q + ++A+ CF ++ P+ + V V+SAC + S
Sbjct: 220 FDEIPVKDVVSWNAMISGYVQSGRF-EEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRS 278
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
LGK I + SN + + NAL+ MY KCG + AR LFD + E + +S N+MI
Sbjct: 279 GELGKWIGSWVRDNGFGSN-LQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIG 337
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
GY+ + EAL LFE ML +N+ P ++TF+ +L ACA G + G+ + +
Sbjct: 338 GYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNS 397
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++ +ID+ + G + AER+ +M
Sbjct: 398 SNASLWTSLIDMYAKCGCIEAAERVFRSM 426
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 316/597 (52%), Gaps = 65/597 (10%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLT-CYSRN-GFLDEAKRVFYEMGEIKDEVSWN 200
+N+ ++Q+H + G + LL C S N G L A+ VF + + WN
Sbjct: 29 SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR-PNTFMWN 87
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Y +E EAL L+ M+ + + YT +L A +S+ Q HAH+IK
Sbjct: 88 TMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKM 147
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS----- 315
GF + + L+++Y+K SGD++ +F+++ Q D V WN+MI GY++ E
Sbjct: 148 GFGSEIYTTNSLLNVYSK-SGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEI 206
Query: 316 -------------------------DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+AL F ++ G D+ + V + AC++L
Sbjct: 207 FNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GK IHA K EI + I + L+ MY+KCG+LE+A +F +M E +MI+G
Sbjct: 267 DQGKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YA HG G EAL F M + P +TF +L+AC+H G V E + F M+ + GF+P
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKP 385
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI---ALKAANH--------------F 512
EHY CM+DLLGRAG L +AE LIE MP P + AL A H
Sbjct: 386 SIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKIL 445
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+Q++P + Y+ LA+I+AA+G+W + A +RR M+++GV K PG S I V H F+A
Sbjct: 446 IQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAG 505
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKR------------LVHHSEKLAVAFGLL 620
D SHP IKEI + LE++ ++++ GY P + HHSEKLAV FGL+
Sbjct: 506 DESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G I ++KNLR+C DCH IK IS + REI +RD RFH FKDG C+CGDYW
Sbjct: 566 STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 169/368 (45%), Gaps = 51/368 (13%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+A AR +FD+I +P+ +NT+I Y++ + E AL L+ M + +T L+ A
Sbjct: 68 LAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKA 127
Query: 141 SSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S+ +Q+H I GF NSLL YS++G + A+ +F ++ + +D VS
Sbjct: 128 CSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ-RDTVS 186
Query: 199 WNSMVVAYGQHRE-------------------------------GLEALQLFQEMVSLQL 227
WNSM+ Y + E EAL LF M + +
Sbjct: 187 WNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGI 246
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
LD L S L A L L G HA++ K + +G LID+YAKC GD+ + +
Sbjct: 247 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC-GDLEEAI 305
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++ + + +W MISGY+ +AL F K+ G P+ +F +++ACS+
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGR-GREALEWFMKMQTAGVEPNQMTFTGILTACSH- 363
Query: 348 SPSLGKQIHALTIKIE----IRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+H + E I + S+ + +V + + G L++A L + MP V
Sbjct: 364 ----AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP----V 415
Query: 402 SLNSMIAG 409
N+ I G
Sbjct: 416 KPNAAIWG 423
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 20/318 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + +HA +K Y +N + +YSK G + +A F+Q
Sbjct: 120 TFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+N ++ Y + I A ++F+ +P+ +++S+ ++IS G + AL+LF
Sbjct: 180 DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH 239
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN----SLLTCYSR 176
M+ D L + A + +L ++ Q + Y H ++ L+ Y++
Sbjct: 240 RMQTAGIKLDNVALVSTLQACA-DLGVLDQGKWIHAYIK-KHEIEIDPILGCVLIDMYAK 297
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L+EA VF +M E K W +M+ Y H G EAL+ F +M + + + T
Sbjct: 298 CGDLEEAIEVFRKMEE-KGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTG 356
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
ILTA + GL A L+ GF + ++DL + +G +++ ++
Sbjct: 357 ILTACSH-----AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGR-AGLLKEAEELI 410
Query: 291 EEIP-QPDLVLWNTMISG 307
E +P +P+ +W +++
Sbjct: 411 ENMPVKPNAAIWGALLNA 428
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 345/649 (53%), Gaps = 37/649 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H+ + N L+ Y+ ++A A LF + + DL+S+NT+IS+Y G+ AL
Sbjct: 279 HSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQ 338
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ D T S + A S+ L+ + +H + + H V NSL+T Y +
Sbjct: 339 LLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNS 398
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++A+R+F M D VS N ++ +Y +G +A+Q+F M ++ L+ T+ +IL
Sbjct: 399 IEDAERIFQLMPN-HDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILG 457
Query: 240 AFTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+FTS DL GL HA+ I +GF + ++ + LI +YAKC GD+ VF+ I +
Sbjct: 458 SFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKC-GDLESSNNVFQRIINRSV 516
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD-CSFVCVISACSNLSPSLGKQIHA 357
V WN MI+ Q + +++L F + G D C C+ S+ S S G Q+H
Sbjct: 517 VSWNAMIAANVQ-HGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHG 575
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K + N V NA + MY KCG +++ ++ N++I+GYA++G
Sbjct: 576 LGLKCGL-GNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFK 634
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EA F+ M+ P +TFV++LSAC+H G V +G Y++ M +FG P +H C+
Sbjct: 635 EAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCI 694
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+D+LGR G+ +AE+ IE MP P I KAA L+L+P +
Sbjct: 695 VDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDD 754
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YA S +W +V +R M+ + K P SW++ KK++ F D SH
Sbjct: 755 SAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHAD 814
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ L+E+ K+++ GYV D KE+ L +HSEKLA+A+GL++ G +
Sbjct: 815 KIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTV 874
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ KNLR+C DCH K +S + REI +RD YRFH FK G CSC D+W
Sbjct: 875 RIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 202/406 (49%), Gaps = 10/406 (2%)
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS---NNLCLIKQLHCL 154
S+ T IS CG +A S+ + MRE+ GF L+ L+TA +H L
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69
Query: 155 AIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE 214
G + +LL Y + +A+R+F+EM E ++ VSW +++VA + E
Sbjct: 70 TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPE-RNVVSWTALMVALSSNGHLEE 128
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
AL ++ M ++ + A++++ SLED V GLQ +H+I SG + + + LI
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+ G + D K+F + + D V WN ++S YS E ++ F + R G D
Sbjct: 189 MLGNL-GRVHDAEKLFYRMEERDTVSWNALVSMYSH-EGLCSKSFRVFSDMRRGGLLRHD 246
Query: 335 CSFVC-VISAC-SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
+ +C +IS C S+ S G +H+L ++ + S I V NALV MYS G L DA LF
Sbjct: 247 ATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHS-YIPVVNALVNMYSSAGKLADAEFLF 305
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
M + +S N+MI+ Y Q+G M+AL+ +L TN P +TF S L AC+ G +
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+G+ +M + + +I + G+ + DAER+ + MP
Sbjct: 366 DGRMVHAMTLQL-SLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 212/408 (51%), Gaps = 21/408 (5%)
Query: 47 CGCLSAAHHAFNQTQ--HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLIS 104
CG AA HA Q NV+ LL Y Q + A++LF ++P+ ++VS+ L+
Sbjct: 62 CG---AAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMV 118
Query: 105 AYADCGDTESALSLFKDMREKRF--DTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
A + G E AL ++ MR +R + + F + S + Q+ I G
Sbjct: 119 ALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQR 178
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQ 220
SV NSL++ G + +A+++FY M E +D VSWN++V Y EGL ++ ++F
Sbjct: 179 QVSVANSLISMLGNLGRVHDAEKLFYRMEE-RDTVSWNALVSMYSH--EGLCSKSFRVFS 235
Query: 221 EMVSLQLGL---DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
+M + GL D TL S+++ S + + G H+ +++G H + + L+++Y+
Sbjct: 236 DM--RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYS 293
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
+G + D +F + + DL+ WNTMIS Y Q D AL +L PD +F
Sbjct: 294 S-AGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMD-ALKTLGQLLHTNEGPDRMTF 351
Query: 338 VCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ ACS+ + G+ +HA+T+++ + N + V N+L+ MY KC ++EDA R+F MP
Sbjct: 352 SSALGACSSPGALMDGRMVHAMTLQLSLHHNLL-VGNSLITMYGKCNSIEDAERIFQLMP 410
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
H+ VS N +I YA G +A+++F WM + IT V++L +
Sbjct: 411 NHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGS 458
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 168/347 (48%), Gaps = 33/347 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L+ G+ +HA+ L+ + + + N I +Y KC + A F
Sbjct: 350 TFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLM 409
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL-VSYNTLISAYADCGDTESALSLF 119
+ +V S N+L+ +YA A Q+F + + ++ ++Y T+++
Sbjct: 410 PNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVN--------------- 454
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ G T+S++ LH I+ GF V+NSL+T Y++ G
Sbjct: 455 --------------ILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGD 500
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L+ + VF + + VSWN+M+ A QH G E+L+LF +M GLD LA ++
Sbjct: 501 LESSNNVFQRIIN-RSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMS 559
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ SL L G+Q H +K G +SH+ + +D+Y KC G M + +K+ +
Sbjct: 560 SSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKC-GKMDEMLKMLPDPAIRPQQ 618
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
WNT+ISGY+ + Y +A FK + VG PD +FV ++SACS+
Sbjct: 619 CWNTLISGYA-RYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSH 664
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 234/702 (33%), Positives = 353/702 (50%), Gaps = 119/702 (16%)
Query: 15 LVTGKSLHALYLKNL------VPFSAYLSNHFILL--YSKCGCLSAAHHAFNQTQHANVF 66
L++G SL L + +PF + + LL Y + G L+ A F Q N
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV 144
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
S+ VLL R+ AR+LFD++P D+V++ ++S Y G A +LF +M ++
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 127 FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ +SG Y++NG ++ A+++
Sbjct: 205 VVSWTAMISG-------------------------------------YAQNGEVNLARKL 227
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M E ++EVSW +M+V Y Q +A +LF M + +A+
Sbjct: 228 FEVMPE-RNEVSWTAMLVGYIQAGHVEDAAELFNAMPE-------HPVAA---------- 269
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ + GF Q G++D VFE++ + D W+ MI
Sbjct: 270 --------CNAMMVGFGQR-----GMVDA----------AKTVFEKMCERDDGTWSAMIK 306
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q E + +AL F+++ G P+ S + +++ C+ L+ G+++HA ++
Sbjct: 307 AYEQNE-FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFD 365
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ +V+ AL+ MY KCGNL+ A+R+F + V NSMI GYAQHG+G +AL +F
Sbjct: 366 MDVFAVS-ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + P IT++ L+AC++TGKV EG++ F+ M P EHYSCM+DLLGR+G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 486 KLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPSNAVPYVMLAN 528
+ +A LI+ MP P IA AA L+LEP NA PYV+L++
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSH 544
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SHPMIKEIHNYLE 587
IY + G+WE+ + +R+ + R + K PG SWIE K++H+F + D +HP I LE
Sbjct: 545 IYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILE 604
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + ++GY D K L +HSE+ AVA+GLL G PI VMKNLR
Sbjct: 605 KLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH+AIK I+ I REI +RD RFH FKDG CSC DYW
Sbjct: 665 VCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 173/426 (40%), Gaps = 72/426 (16%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+LL Y RN D A +F M +D S+N+++ R+ L + S+
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPS-RDLASYNALISGLSLRRQTLP--DAAAALASIPF 108
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ + S+L + L ++ + + + + GL+D +G + +
Sbjct: 109 PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLD-----AGRVNEAR 163
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSN 346
++F+E+P D+V W M+SGY Q + +A F ++ + S+ +IS N
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRIT-EARALFDEMPKRNV----VSWTAMISGYAQN 218
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+L +++ E+ R V+ A++ Y + G++EDA LF+ MPEH + N+
Sbjct: 219 GEVNLARKL------FEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNA 272
Query: 406 MIAGYAQHGIG-------------------------------MEALRLFEWMLETNIPPT 434
M+ G+ Q G+ MEAL F ML + P
Sbjct: 273 MMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPN 332
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ +S+L+ CA + G++ + M F+ + S +I + + G L A+R+
Sbjct: 333 YPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSALITMYIKCGNLDKAKRV- 390
Query: 495 EAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
F EP + V + + YA G E+ I MR G+
Sbjct: 391 -----------------FHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPD 433
Query: 555 PGFSWI 560
G ++I
Sbjct: 434 -GITYI 438
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 38/157 (24%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI- 431
NA +A ++ GN+E AR F+ MP T S N+++AGY ++ + AL LF M ++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 432 ----------------------------PPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
PP+ ++F S+L G +A+ + F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 464 MFGFEPEGEH--YSCMIDLLGRAGKLTDAERLIEAMP 498
PE H Y+ ++ L AG++ +A RL + MP
Sbjct: 139 -----PERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 44/251 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C L G+ +HA L+ + + I +Y KCG L A F+ +
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE--- 395
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
P+ D+V +N++I+ YA G E AL +F DMR
Sbjct: 396 ---------------------------PK-DIVMWNSMITGYAQHGLGEQALGIFHDMRL 427
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSRN 177
DG T G +TA S + + +I G +HY+ + + L R+
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL----GRS 483
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTLAS 236
G ++EA + M D V W +++ A HR A ++++ L+ G Y L S
Sbjct: 484 GLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLS 543
Query: 237 -ILTAFTSLED 246
I T+ ED
Sbjct: 544 HIYTSVGRWED 554
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 218/637 (34%), Positives = 337/637 (52%), Gaps = 60/637 (9%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L ++ H LK+ V +L N + Y++ G L A F+ N FS+N LL+A
Sbjct: 33 LPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSA 92
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES--ALSLFKDMREKRFDTDGF 132
YAR R AR LF+ IP PD SYN +++A A G + AL M F + +
Sbjct: 93 YARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAY 152
Query: 133 TLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+ + ++A + +L +Q+H L + +L+ Y++ +A+RVF M
Sbjct: 153 SFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM 212
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
E ++ VSWNS++ Y Q+ EAL LF EM++ D TL+S+++A L G
Sbjct: 213 PE-RNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREG 271
Query: 251 LQFHAHLIKSG-FHQNSHIGSGLIDLYAKC------------------------------ 279
Q HAH++K + + + L+D+YAKC
Sbjct: 272 RQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAK 331
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
S ++ D VF ++ + +++ WN +I+ Y+Q E ++A+ F +L R P ++
Sbjct: 332 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGE-EEEAIRLFVQLKRDSIWPTHYTYGN 390
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAMYSKCGNLEDARRLFD 393
V++AC N++ LG+Q H +K R + + V N+LV MY K G+++D ++F+
Sbjct: 391 VLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450
Query: 394 RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
RM + VS N+MI GYAQ+G +AL LFE ML +N P ++T + VLSAC H+G V E
Sbjct: 451 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDE 510
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI--------- 504
G+++F M + G P +HY+CM+DLLGRAG L +AE LI+ MP P S+
Sbjct: 511 GRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGAC 570
Query: 505 --------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG 556
+ A +L+P N+ PYV+L+N+YA GKW +V +RR M+DRGV K+PG
Sbjct: 571 RLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPG 630
Query: 557 FSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
SWIE+ +M+VF+A D HP EIH+ L + +M
Sbjct: 631 CSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 224/487 (45%), Gaps = 41/487 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C +DL TG+ +H L ++ ++ + +Y+KC A F+
Sbjct: 153 SFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM 212
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
NV S+N L+ Y + + A LF ++ PD V+ ++++SA A
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGR 272
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY---CGFDHYASVN----NS 169
+ M ++ D L NN + C + C FD S + S
Sbjct: 273 QVHAHMVKRDRLRDDMVL--------NNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+L Y+++ +++A+ VF +M E K+ ++WN ++ AY Q+ E EA++LF ++ +
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVE-KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWP 383
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF------HQNSHIGSGLIDLYAKCSGDM 283
YT ++L A ++ L G Q H H++K GF + +G+ L+D+Y K +G +
Sbjct: 384 THYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK-TGSI 442
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
D KVFE + D V WN MI GY+Q D AL F+++ +PD + + V+SA
Sbjct: 443 DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD-ALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 344 C--SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNT 400
C S L + H +T I +R +V + + G+L++A L MP E ++
Sbjct: 502 CGHSGLVDEGRRHFHFMTEDHGITPSRDHY-TCMVDLLGRAGHLKEAEELIKDMPTEPDS 560
Query: 401 VSLNSMIAGYAQHG---IGME-ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
V S++ H +G A RLFE E + P +V + + A GK A+ +
Sbjct: 561 VLWASLLGACRLHKNVELGERTAGRLFELDPENSGP-----YVLLSNMYAEMGKWADVFR 615
Query: 457 YFSMMKD 463
MKD
Sbjct: 616 VRRSMKD 622
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/532 (37%), Positives = 308/532 (57%), Gaps = 73/532 (13%)
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-GLEALQLFQEMVSLQLGLDMYTLA 235
+G +D++++VF +M E + +SW +++ AY Q E EA++LF +M+S +
Sbjct: 8 DGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC------ 60
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+G+ LI +YA+ SG M D K F+ + +
Sbjct: 61 --------------------------------VGNSLISMYAR-SGRMEDARKAFDILFE 87
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
+LV +N ++ GY+ K S++A F ++ G +F ++S +++ G+Q
Sbjct: 88 KNLVSYNAIVDGYA-KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 146
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
IH +K +SN+ + NAL++MYS+CGN+E A ++F+ M + N +S SMI G+A+HG
Sbjct: 147 IHGRLLKGGYKSNQ-CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 205
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
AL +F MLET P IT+V+VLSAC+H G ++EGQK+F+ M G P EHY
Sbjct: 206 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 265
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEP 517
+CM+DLLGR+G L +A I +MP ++ + AA L+ EP
Sbjct: 266 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP 325
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
+ Y++L+N++A++G+W++V IR+ M++R + K+ G SWIEV+ ++H F + SHP
Sbjct: 326 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 385
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+I+ L++++ K+K+ GY+PD KE+ L HSEK+AVAFGL+STS
Sbjct: 386 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQS 445
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+PI + KNLR+CGDCH AIK+IS GREI VRD+ RFH K+G CSC DYW
Sbjct: 446 KPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 150/305 (49%), Gaps = 12/305 (3%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L++ YAR R+ AR+ FD + + +LVSYN ++ YA +E A LF ++ +
Sbjct: 63 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 122
Query: 129 TDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT + L++ +++ + K Q+H + G+ + N+L++ YSR G ++ A +V
Sbjct: 123 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 182
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E ++ +SW SM+ + +H AL++F +M+ + T ++L+A + +
Sbjct: 183 FNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 241
Query: 247 LVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
+ G + F++ + G + ++DL + SG + + M+ +P D ++W T+
Sbjct: 242 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR-SGLLVEAMEFINSMPLMADALVWRTL 300
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEI 364
+ + + LG + PDD + ++ SNL S G+ + I+ +
Sbjct: 301 LGAC---RVHGNTELGRHAAEMILEQEPDDPAAYILL---SNLHASAGQWKDVVKIRKSM 354
Query: 365 RSNRI 369
+ +
Sbjct: 355 KERNL 359
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Query: 378 MYSKC---GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG-IGMEALRLFEWMLETNIPP 433
MY+KC G+++D+R++F++MPEHN +S ++I Y Q G EA+ LF M+ ++
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASV-- 58
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
N S++S A +G++ + +K F ++ FE Y+ ++D G A L E
Sbjct: 59 -NCVGNSLISMYARSGRMEDARKAFDIL-----FEKNLVSYNAIVD--GYAKNLKSEEAF 110
Query: 494 I 494
+
Sbjct: 111 L 111
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L + G+ +H LK + + N I +YS+CG + AA FN+
Sbjct: 127 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 186
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ NV S+ ++ +A+ A ++F ++ +P+ ++Y ++SA + G
Sbjct: 187 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 246
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M ++ G++ + C++ L R
Sbjct: 247 KHFNSMYKEH---------GIVPRMEHYACMVDLL-----------------------GR 274
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQE 221
+G L EA M + D + W +++ A +G G A ++ E
Sbjct: 275 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 219/671 (32%), Positives = 355/671 (52%), Gaps = 57/671 (8%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H N F + L+ YA+ + AR++FD + + ++V++ TL+ + +
Sbjct: 92 HVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKH 151
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F++M +TLS ++ A S+ +L L Q H I D ASV ++L +
Sbjct: 152 AIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCS 211
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G L++A + F + E K+ +SW S V A + ++ L+LF EM+++ + + +
Sbjct: 212 LYSKCGRLEDALKTFSRIRE-KNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEF 270
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S L+ + L G Q ++ IK G+ N + + L+ LY K SG + + ++F
Sbjct: 271 TLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLK-SGCIVEAHRLFNR 329
Query: 293 IPQPDLVLWNTMISGYSQKEEYS----------DQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +V WN MI+G++Q E + +AL F KLN G PD + V+S
Sbjct: 330 MDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLS 389
Query: 343 ACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
CS L+ G+QIHA TIK S+ I V+ +L++MYSKCG++E A + F M +
Sbjct: 390 VCSRMLAIEQGEQIHAQTIKTGFLSDVI-VSTSLISMYSKCGSIERASKAFLEMSTRTMI 448
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ SMI G++QHG+ +AL +FE M + P +TFV VLSAC+H G V++ YF +M
Sbjct: 449 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIM 508
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SI 504
+ + +P +HY CM+D+ R G+L A I+ M + P +
Sbjct: 509 QKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLEL 568
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA L L+P + YV+L N+Y ++ ++E+V+ +R++M + V K +SWI +K
Sbjct: 569 GFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKD 628
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-------------------VPDKEKR 605
+++ F +HP I LE++ K+K GY P+
Sbjct: 629 KVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPN---- 684
Query: 606 LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHC 665
++HSEKLA+ FGL + PI V+K+ IC D HN IK++S +AGREI V+D+ R H
Sbjct: 685 -IYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHK 743
Query: 666 FKDGRCSCGDY 676
F +G CSCG++
Sbjct: 744 FANGECSCGNF 754
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 198/434 (45%), Gaps = 59/434 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C + L G HA +K V F A + + LYSKCG L A F++
Sbjct: 170 TLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRI 229
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV +S+ + +SA AD G L LF
Sbjct: 230 REKNV-------------------------------ISWTSAVSACADNGAPVKGLRLFV 258
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + FTL+ ++ +L L Q++ L I G++ V NSLL Y ++G
Sbjct: 259 EMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSG 318
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----------GLEALQLFQEMVSLQL 227
+ EA R+F M + V+WN+M+ + Q E G EAL+LF ++ +
Sbjct: 319 CIVEAHRLFNRMDD-ASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGM 377
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D++TL+S+L+ + + + G Q HA IK+GF + + + LI +Y+KC G +
Sbjct: 378 KPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKC-GSIERAS 436
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
K F E+ ++ W +MI+G+SQ S QAL F+ ++ G P+ +FV V+SACS+
Sbjct: 437 KAFLEMSTRTMIAWTSMITGFSQ-HGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSH- 494
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNA------LVAMYSKCGNLEDARRLFDRMP-EHNT 400
G AL EI + + A +V M+ + G LE A +M E +
Sbjct: 495 ---AGMVSQALNY-FEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 550
Query: 401 VSLNSMIAGYAQHG 414
++ IAG HG
Sbjct: 551 FIWSNFIAGCKSHG 564
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 5/245 (2%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H H++K+G H N + S L+++YAKC G+M D +VF+ + + ++V W T++ G+ Q +
Sbjct: 90 HGHVMKTGCHDNFFVMSFLVNVYAKC-GNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN 372
A+ F+++ G +P + V+ ACS+L S LG Q HA IK + + SV
Sbjct: 149 -PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDA-SVG 206
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
+AL ++YSKCG LEDA + F R+ E N +S S ++ A +G ++ LRLF M+ +I
Sbjct: 207 SALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIK 266
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P T S LS C + G + +S+ FG+E + ++ L ++G + +A R
Sbjct: 267 PNEFTLTSALSQCCEILSLELGTQVYSLCIK-FGYESNLRVRNSLLYLYLKSGCIVEAHR 325
Query: 493 LIEAM 497
L M
Sbjct: 326 LFNRM 330
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 222/577 (38%), Positives = 317/577 (54%), Gaps = 60/577 (10%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE-------IKD 195
N L L Q+H + G A V + ++ Y+ +G +D + VF +G+ +K
Sbjct: 84 NMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKS 143
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV-GGLQFH 254
V S V G+ GL ++ + L D+Y S++ + ++ G F
Sbjct: 144 SVELLS--VWMGKCVHGL--------ILRIGLQFDLYVATSLIILYGKCGEINDAGKVFD 193
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
I+ N+ L+ Y K SG + + +FE +P ++V W TMISGYSQ
Sbjct: 194 NMTIRDVSSWNA-----LLAGYTK-SGCIDAALAIFERMPWRNIVSWTTMISGYSQ-SGL 246
Query: 315 SDQALGCFKKLNR--VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISV 371
+ QAL F ++ + G P+ + + V+ AC+ LS G+QIH L ++ + SN SV
Sbjct: 247 AQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNA-SV 305
Query: 372 NNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
AL AMY+KCG+L DAR FD++ E N ++ N+MI YA +G G++A+ F M++
Sbjct: 306 LIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQA 365
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
I P +ITF +LS C+H+G V G KYF+ M + P EHY+C+ DLLGRAG+L +
Sbjct: 366 GIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAE 425
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A +L+ MP G +A AA LEP N YV+L+N+YA
Sbjct: 426 ASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAE 485
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+G+W+EV +R +++ +G +K PG SWIE+ + H+F+ D SHP KEI+ +LE + K
Sbjct: 486 AGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEK 545
Query: 593 MKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
MK AGY PD KE L+ HSEKLAVAFG+L+T + V KNLRICGDC
Sbjct: 546 MKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDC 605
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H A+ FIS I GRE+ VRD RFH FK G CSCGDYW
Sbjct: 606 HTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 166/314 (52%), Gaps = 10/314 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK+ V + GK +H L L+ + F Y++ I+LY KCG ++ A F+
Sbjct: 136 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N LLA Y + I +A +F+++P ++VS+ T+IS Y+ G + ALSLF
Sbjct: 196 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 255
Query: 121 DM--REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M + + T+ ++ A + + L +Q+H LA G + ASV +L Y++
Sbjct: 256 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 315
Query: 177 NGFLDEAKRVFYEMGE-IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G L +A+ F ++ K+ ++WN+M+ AY + GL+A+ F+EM+ + D T
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEI 293
+L+ + + GL++ H+ + + N + + + DL + +G + + K+ E+
Sbjct: 376 GLLSGCSHSGLVDVGLKYFNHM-STTYSINPRVEHYACVADLLGR-AGRLAEASKLVGEM 433
Query: 294 PQP-DLVLWNTMIS 306
P P +W ++++
Sbjct: 434 PMPAGPSIWGSLLA 447
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 143/328 (43%), Gaps = 35/328 (10%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ + A + T L L G Q HAH++ G + +GS ++ YA SGD+ + VF
Sbjct: 70 ILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYAS-SGDIDSSVSVF 128
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPD---DCSFVCVISACSN 346
I D + ++ S E S C L R+G D S + + C
Sbjct: 129 NGI--GDYFTFPFVLK--SSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGE 184
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
++ + GK +TI+ +S NAL+A Y+K G ++ A +F+RMP N VS +M
Sbjct: 185 INDA-GKVFDNMTIR------DVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTM 237
Query: 407 IAGYAQHGIGMEALRLFEWML--ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
I+GY+Q G+ +AL LF+ M+ ++ + P +T +SVL ACA + G++ + M
Sbjct: 238 ISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRM 297
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYV 524
G + + + G L DA + + N N + +
Sbjct: 298 -GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN----------------EKNLIAWN 340
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ YA+ G + + R M G+Q
Sbjct: 341 TMITAYASYGHGLQAVSTFREMIQAGIQ 368
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 228/675 (33%), Positives = 351/675 (52%), Gaps = 68/675 (10%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD-------- 108
FN+ + FS Q+R +S Q P+P + + A
Sbjct: 44 FNRRKRRTPFS----------QIRCSSLEQGLQPRPKPKPSTIELNVGKEAQVNETQLRK 93
Query: 109 -----CGDTE---------SALSLFKDMR-EKRFDTDGFTLSGLITA--SSNNLCLIKQL 151
CG E AL LF+ + +D D T L++A ++ +K++
Sbjct: 94 PSSELCGQIEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKV 153
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
I G D + N +L + + G + +A+R+F EM E K+ +SWN+++ +
Sbjct: 154 FNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPE-KNILSWNTIIGGLVDAGD 212
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EA +LF M +++ A L + G Q H+ +K+G + +
Sbjct: 213 YFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACA 272
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
LID+Y+KC G + D VF+++P+ V WN++I+GY+ YS++AL + ++ G
Sbjct: 273 LIDMYSKC-GSIEDAQCVFDQMPEKTTVGWNSIIAGYAL-HGYSEEALSMYYEMRDSGVK 330
Query: 332 PDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D+ +F +I C+ L S KQ HA ++ + I N ALV +YSK G +EDA+
Sbjct: 331 IDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD-IVANTALVDLYSKWGRIEDAKH 389
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FD MP N +S N++IAGY HG G+EA+ +FE ML + P ++TF++VLSAC+++G
Sbjct: 390 VFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGL 449
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-------- 502
G + F M +P HY+CMI+LLGR G L +A LI+ PF P
Sbjct: 450 SDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALL 509
Query: 503 ---------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQK 553
+ AA + P YV+L NIY SG+ EE A + + ++ RG++
Sbjct: 510 TACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRM 569
Query: 554 KPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-----------DK 602
P SWIE+KKQ + F++ D H KEI+ L+E+ ++ + GYVP +
Sbjct: 570 LPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQE 629
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
E+ L++HSEKLA+AFGL++TS P+ ++++ RICGDCH+AIK I+ + REI VRD R
Sbjct: 630 ERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASR 689
Query: 663 FHCFKDGRCSCGDYW 677
FH FKDG CSCGDYW
Sbjct: 690 FHHFKDGSCSCGDYW 704
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 159/355 (44%), Gaps = 42/355 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +++ G + G+ LH+ LK V +++ I +YSKCG + A F+Q
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ-- 292
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+P+ V +N++I+ YA G +E ALS++ +
Sbjct: 293 -----------------------------MPEKTTVGWNSIIAGYALHGYSEEALSMYYE 323
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR+ D FT S +I A +L KQ H + GF N +L+ YS+ G
Sbjct: 324 MRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGR 383
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++AK VF +M K+ +SWN+++ YG H G+EA+++F+ M+ + + T ++L+
Sbjct: 384 IEDAKHVF-DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
Query: 240 A--FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A ++ L D G F + + + +I+L + G + + + ++ P +P
Sbjct: 443 ACSYSGLSDR-GWEIFESMSRDHKIKPRAMHYACMIELLGR-EGLLDEAFALIKDAPFKP 500
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+ +W +++ + + LG F G P+ S V+ N S L
Sbjct: 501 TVNMWAALLTACRVHKNFE---LGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRL 552
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +++ C L K HA +++ + + LYSK G + A H F+
Sbjct: 335 TFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMM 394
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
H NV S+N L+A Y R A ++F+++ P+ V++ ++SA + G ++
Sbjct: 395 PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGW 454
Query: 117 SLFKDM 122
+F+ M
Sbjct: 455 EIFESM 460
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 301/546 (55%), Gaps = 72/546 (13%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH-L 257
W +M+ Y E+ + M +G +T +++ A + ++ G Q HA +
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 258 IKSGFHQNSHIGSGLIDLYAKCS------------------------------GDMRDCM 287
+ GF + ++G+ +IDLY KC GDM
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F+++P D+V W M++GY+Q +AL F+K+ VG D+ + VISAC+ L
Sbjct: 230 GLFDDLPSKDMVAWTAMVTGYAQNGR-PKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 348 SPSLGKQIHALTIK-IEIRSN-----RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
G HA I+ I RS + V +AL+ MYSKCG+ ++A ++F+ M E N
Sbjct: 289 ----GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S +SMI GYA HG AL+LF ML+T I P +TF+ +LSAC+H G V +G++ F+ M
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------I 504
+ FG P +HY+CM+DLLGRAG L +A L++ MP P I
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDI 464
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AAN +LEP+ Y++L+NIYA++G+WEEV+ +R+++R++G +K PG SW E K
Sbjct: 465 AQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKN 524
Query: 565 -QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSE 611
++H F A D +HP EI L+++ +++ GY P +KE+ L+ HSE
Sbjct: 525 GEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSE 584
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLA+A+GLL T G+ I +MKN+RIC DCHN + S I GREI VRD RFH F +G C
Sbjct: 585 KLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTC 644
Query: 672 SCGDYW 677
SCG++W
Sbjct: 645 SCGNFW 650
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 160/313 (51%), Gaps = 11/313 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF + K C ++ GK +HA L Y+ N I LY KCG L A F++
Sbjct: 144 TFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDE 203
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+ L+ AYA+ + SA LFD +P D+V++ +++ YA G + AL F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYF 263
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYAS--VNNSLLTCY 174
+ M++ +TD TL+G+I+A + L +K + +A GF + V ++L+ Y
Sbjct: 264 QKMQDVGMETDEVTLAGVISACA-QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMY 322
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ G DEA +VF M E ++ S++SM++ Y H ALQLF +M+ ++ + T
Sbjct: 323 SKCGSPDEAYKVFEVMKE-RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTF 381
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
IL+A + + G Q A + K G + + ++DL + +G + + + + + +
Sbjct: 382 IGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGR-AGCLEEALDLVKTM 440
Query: 294 P-QPDLVLWNTMI 305
P +P+ +W ++
Sbjct: 441 PMEPNGGVWGALL 453
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HAH+I++G Q S++ + LI + K M + VF ++ P+ LW MI GY+
Sbjct: 60 QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYAL 119
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRI 369
+ S ++ + ++ R G P +F + AC + L+ LGKQ+HA TI I ++ +
Sbjct: 120 QGLLS-ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS--------------------------- 402
V N+++ +Y KCG L AR++FD M E + VS
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238
Query: 403 ----LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+M+ GYAQ+G EAL F+ M + + +T V+SACA G V +
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHAN-WI 297
Query: 459 SMMKDMFGFEPEGEHY--SCMIDLLGRAGKLTDAERLIEAMP----FNPGSIALKAANH 511
+ + GF P G S +ID+ + G +A ++ E M F+ S+ L A H
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 228/650 (35%), Positives = 353/650 (54%), Gaps = 46/650 (7%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +V S + L A R + A LFD I +P LVS+N LI Y + + A++LF
Sbjct: 45 NHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFC 104
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ F D FTL ++ + L KQ+H L + GF V +SL++ YS+ G
Sbjct: 105 KLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCG 163
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ ++VF M E KD VSWNS++ Y + E AL++F+EM D ++ ++
Sbjct: 164 EIELCRKVFDRM-EDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK----DSFSWTILI 218
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ G L+ + +NS + +I+ Y K +GD ++F+++P+ L
Sbjct: 219 DGLSK----SGKLEAARDVFDRMPIRNSVSWNAMINGYMK-AGDSNTAKELFDQMPERSL 273
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V WN+MI+GY + ++++ +AL F+ + R P+ + + +SA S + S G+ +H+
Sbjct: 274 VTWNSMITGYERNKQFT-KALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHS 332
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K +++ + + L+ MYSKCG+++ A R+F +P+ S+I G HG+
Sbjct: 333 YIVKSGFKTDGV-LGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVE 391
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ L LF+ M T + P ITF+ VL+AC+H G + +YF MM +G +P EHY C+
Sbjct: 392 QTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCL 451
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNA 520
ID+L RAG L +A+ IE MP + AA H + L P
Sbjct: 452 IDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTT 511
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L+N+YAA+G WE+V +R +M+ +G++K PG S IE + +H F+ D SHP +
Sbjct: 512 GCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTE 571
Query: 581 EIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI+ L EM +K+ AG++PD KE L HSE+LA+AFGLL+ +G P
Sbjct: 572 EIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSP 631
Query: 628 ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRIC DCH K +S I REI +RD RFH FK G CSC D+W
Sbjct: 632 IRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 203/418 (48%), Gaps = 46/418 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C L GK +H L LK ++ + + +YSKCG + F++
Sbjct: 116 TLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRM 175
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+N L+ YAR I A ++F+++P+ D S+ LI + G E+A +F
Sbjct: 176 EDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFD 235
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN-NSLLTCYSRNGF 179
M + SV+ N+++ Y + G
Sbjct: 236 RMPIRN--------------------------------------SVSWNAMINGYMKAGD 257
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ AK +F +M E + V+WNSM+ Y ++++ +AL+LF+ M+ + + T+ ++
Sbjct: 258 SNTAKELFDQMPE-RSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVS 316
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A + + L G H++++KSGF + +G+ LI++Y+KC G ++ ++VF IP+ L
Sbjct: 317 AASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC-GSVKSALRVFRSIPKKKLG 375
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHA 357
W ++I G +Q L F ++ R G P +F+ V++ACS+ + +
Sbjct: 376 HWTSVIVGLGM-HGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKM 434
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG 414
+T I+ + I L+ + + G+LE+A+ +RMP + N V S+++G +HG
Sbjct: 435 MTYDYGIKPS-IEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 304/529 (57%), Gaps = 35/529 (6%)
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D A R+F ++ + D V +N+M Y + + L A+ L +++ L D YT +S+L
Sbjct: 85 MDHAHRMFDKIPQ-PDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLK 143
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A L+ L G Q H +K G N ++ LI++Y C+ D+ +VF++I +P +V
Sbjct: 144 ACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACN-DVDAARRVFDKIGEPCVV 202
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+N +I+ ++ ++AL F++L G P D + + +S+C+ L LG+ IH
Sbjct: 203 AYNAIITSCARNSR-PNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEY 261
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+K + VN AL+ MY+KCG+L+DA +F MP +T + ++MI YA HG G +
Sbjct: 262 -VKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQ 320
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
A+ + M + + P ITF+ +L AC+HTG V EG +YF M +G P +HY CMI
Sbjct: 321 AISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMI 380
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAV 521
DLLGRAG+L +A + I+ +P P I + +L+ S+
Sbjct: 381 DLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGG 440
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+N+ A +G+W++V +R++M D+G K PG S IEV +H F + DG H
Sbjct: 441 DYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTI 500
Query: 582 IHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+H+ L+E+ +++K AGYVPD KE L +HSEKLA+ +GLL+T G I
Sbjct: 501 LHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTI 560
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCHNA KFIS I GR+I +RD RFH FKDG+CSCGDYW
Sbjct: 561 RVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 41/315 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L GK LH L +K V + Y+ I +Y+ C + AA
Sbjct: 137 TFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAA------- 189
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R++FD+I +P +V+YN +I++ A AL+LF+
Sbjct: 190 ------------------------RRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFR 225
Query: 121 DMREKRFDTDGFTLSGLITASS----NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+++E T+ L+ SS L L + +H GFD Y VN +L+ Y++
Sbjct: 226 ELQESGLKPTDVTM--LVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAK 283
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G LD+A VF +M +D +W++M+VAY H G +A+ + +EM ++ D T
Sbjct: 284 CGSLDDAVSVFKDMPR-RDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLG 342
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
IL A + + G + FH+ + G + +IDL + +G + + K +E+P
Sbjct: 343 ILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGR-AGRLEEACKFIDELPI 401
Query: 295 QPDLVLWNTMISGYS 309
+P +LW T++S S
Sbjct: 402 KPTPILWRTLLSSCS 416
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 326 NRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSK---C 382
N P S + +I C++L KQI A TIK N +V L+ +
Sbjct: 27 NTAALEPPSSSILSLIPKCTSLREL--KQIQAYTIKTH--QNNPTVLTKLINFCTSNPTI 82
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
+++ A R+FD++P+ + V N+M GYA+ + A+ L +L + + P + TF S+L
Sbjct: 83 ASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLL 142
Query: 443 SACAHTGKVAEGQK 456
ACA + EG++
Sbjct: 143 KACARLKALEEGKQ 156
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
+ F+Q N L+ YA+ + A +F +P+ D +++ +I AYA G
Sbjct: 265 NGFDQYVKVN----TALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQ 320
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ--------LHCLAIYCGFDHYASV 166
A+S+ ++M++ + D T G++ A S+ L+++ H I HY +
Sbjct: 321 AISMLREMKKAKVQPDEITFLGILYACSHT-GLVEEGYEYFHSMTHEYGIVPSIKHYGCM 379
Query: 167 NNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+ L R G L+EA + E+ + W +++ + H
Sbjct: 380 IDLL----GRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSH 418
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 227/678 (33%), Positives = 354/678 (52%), Gaps = 65/678 (9%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++F N L+ YA ++ R+LFD + + ++VS+ +LI+ Y+ ++ A+SLF
Sbjct: 162 EGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQ 221
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M E + + T+ +I+A + +L L K++ G + + N+L+ Y + G
Sbjct: 222 MGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGD 281
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ A+++F E K+ V +N+++ Y H + L + EM+ D T+ S +
Sbjct: 282 ICAARQIFDECAN-KNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIA 340
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS------------------- 280
A L DL G HA+++++G +I + +ID+Y KC
Sbjct: 341 ACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVT 400
Query: 281 -----------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
GDM ++F+E+ + DLV WNTMI Q + ++A+ F+++ G
Sbjct: 401 WNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMF-EEAIELFREMQNQG 459
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
D + V + SAC L L K + K +I + + + ALV M+S+CG+ A
Sbjct: 460 IPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVD-LQLGTALVDMFSRCGDPSSA 518
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
+F RM + + + + I A G A+ LF MLE + P ++ FV++L+AC+H
Sbjct: 519 MHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHG 578
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI---- 504
G V +G++ F M+ G P HY CM+DLLGRAG L +A LI++MP P +
Sbjct: 579 GSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGS 638
Query: 505 -------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
A AA QL P +V+L+NIYA++GKW +VA +R M+++GV
Sbjct: 639 LLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGV 698
Query: 552 QKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---------- 601
QK PG S IEV+ +H F + D SH I LEE++ ++ +AGYVPD
Sbjct: 699 QKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDE 758
Query: 602 --KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
KE L HSEKLA+A+GL++T G PI V+KNLR+C DCH+ K +S + REITVRD
Sbjct: 759 QEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRD 818
Query: 660 TYRFHCFKDGRCSCGDYW 677
R+H FK+G CSC DYW
Sbjct: 819 NNRYHFFKEGFCSCRDYW 836
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 223/475 (46%), Gaps = 44/475 (9%)
Query: 62 HANVFSFNVLLAAYARQLRIAS---ARQLF--DQIPQPDLVSYNTLISAYADCGDTESAL 116
H + N L+A+ + + S AR F D L YN LI YA G + A+
Sbjct: 56 HKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAI 115
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCY 174
L+ M D +T L++A S L L + Q+H + G + V+NSL+ Y
Sbjct: 116 LLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY 175
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G +D +++F M E ++ VSW S++ Y EA+ LF +M + + T+
Sbjct: 176 AECGKVDLGRKLFDGMLE-RNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTM 234
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+++A L+DL G + +++ + G ++ + + L+D+Y KC GD+ ++F+E
Sbjct: 235 VCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKC-GDICAARQIFDECA 293
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+LV++NT++S Y E SD L ++ + G PD + + I+AC+ L S+GK
Sbjct: 294 NKNLVMYNTIMSNYVHHEWASD-VLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGK 352
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
HA ++ + +++NA++ MY KCG E A ++F+ MP V+ NS+IAG +
Sbjct: 353 SSHAYVLRNGLEGWD-NISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRD 411
Query: 414 GIGMEALRLFEWMLETN-------------------------------IPPTNITFVSVL 442
G A R+F+ MLE + IP +T V +
Sbjct: 412 GDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIA 471
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
SAC + G + + K+ + + + + ++D+ R G + A + + M
Sbjct: 472 SACGYLGAL-DLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM 525
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 187/366 (51%), Gaps = 27/366 (7%)
Query: 148 IKQLHCLAIYCGF--DHYASVNNSLLTC-----------YSRNGFLDEAKRVFYEMGEIK 194
+KQLHC + G AS N L+ Y+RN F D+ G +
Sbjct: 41 LKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDD-------GNMA 93
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+N ++ Y G +A+ L+ +M+ + + D YT +L+A + + L G+Q H
Sbjct: 94 SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 153
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
++K G + + + LI YA+C G + K+F+ + + ++V W ++I+GYS ++
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAEC-GKVDLGRKLFDGMLERNVVSWTSLINGYSGRD-L 211
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
S +A+ F ++ G P+ + VCVISAC+ L LGK++ + ++ + + I VN
Sbjct: 212 SKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN- 270
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV MY KCG++ AR++FD N V N++++ Y H + L + + ML+ P
Sbjct: 271 ALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
+T +S ++ACA G ++ G+ + ++++ G E + +ID+ + GK A +
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRN--GLEGWDNISNAIIDMYMKCGKREAACK 388
Query: 493 LIEAMP 498
+ E MP
Sbjct: 389 VFEHMP 394
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 198/431 (45%), Gaps = 35/431 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C +DL GK + + + + S + N + +Y KCG + AA F++
Sbjct: 233 TMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDEC 292
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ N+ +N +++ Y + + D++ P+PD V+ + I+A A GD L
Sbjct: 293 ANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGD----L 348
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG--------FDHYASVN- 167
S+ K + + L + N I ++ + CG F+H +
Sbjct: 349 SVGK-------SSHAYVLRNGLEGWDNISNAIIDMY---MKCGKREAACKVFEHMPNKTV 398
Query: 168 ---NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
NSL+ R+G ++ A R+F EM E +D VSWN+M+ A Q EA++LF+EM +
Sbjct: 399 VTWNSLIAGLVRDGDMELAWRIFDEMLE-RDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ D T+ I +A L L ++ K+ H + +G+ L+D++++C GD
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRC-GDPS 516
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
M VF+ + + D+ W I G E ++ A+ F ++ PDD FV +++AC
Sbjct: 517 SAMHVFKRMEKRDVSAWTAAI-GVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTAC 575
Query: 345 SN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVS 402
S+ S G+Q+ K I +V + + G LE+A L MP E N V
Sbjct: 576 SHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV 635
Query: 403 LNSMIAGYAQH 413
S++A +H
Sbjct: 636 WGSLLAACRKH 646
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 178/382 (46%), Gaps = 30/382 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T + C DL GKS HA L+N + +SN I +Y KCG AA F
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ V ++N L+A R + A ++FD++ + DLVS+NT+I A E A+ LF+
Sbjct: 394 PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFR 453
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHY-ASVNNSLLTCYSRN 177
+M+ + D T+ G+ +A L L K + C I H + +L+ +SR
Sbjct: 454 EMQNQGIPGDRVTMVGIASACGYLGALDLAKWV-CTYIEKNDIHVDLQLGTALVDMFSRC 512
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSM--VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G A VF M E +D +W + V+A + EG A++LF EM+ ++ D
Sbjct: 513 GDPSSAMHVFKRM-EKRDVSAWTAAIGVMAMEGNTEG--AIELFNEMLEQKVKPDDVVFV 569
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKS-GFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
++LTA + + G Q + K+ G + H G ++DL + +G + + + + + +
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGC-MVDLLGR-AGLLEEAVDLIQSM 627
Query: 294 P-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-----RVGYHPDDCSFVCVISACSNL 347
P +P+ V+W ++++ +K + + A +KL RVG H SN+
Sbjct: 628 PIEPNDVVWGSLLAA-CRKHKNVELAHYAAEKLTQLAPERVGIH----------VLLSNI 676
Query: 348 SPSLGKQIHALTIKIEIRSNRI 369
S GK ++++++ +
Sbjct: 677 YASAGKWTDVARVRLQMKEKGV 698
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/532 (38%), Positives = 314/532 (59%), Gaps = 37/532 (6%)
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR-EGLEALQLFQEMVSLQL-GLDMYTLA 235
G +D A+++F ++ + + SWNSM+ Q + E + LF++MV + +T+A
Sbjct: 38 GDIDYARKLFSQI-QRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMA 96
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+L A + + L G Q HA+++KSGF + + + L++ YAKC D+ KVF+EI
Sbjct: 97 FVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCE-DIVLASKVFDEITD 155
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQ 354
+LV W+TMISGY+ + ++ALG F+ + + G PD+ + V VISAC+ + + GK
Sbjct: 156 RNLVAWSTMISGYA-RIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKW 214
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA K I ++ + ++ ALV MY+KCG +E A+ +FD MP +T + +SMI G A +G
Sbjct: 215 VHAYINKQLIETD-LELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAING 273
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ +AL F M E + P ++TF+ VLSACAH+G V+EG++Y+S M + FG P E Y
Sbjct: 274 LAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELY 332
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEP 517
CM+DLL RA + DA L+E MP +P + + A L+LEP
Sbjct: 333 GCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEP 392
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
NA Y++L+N+YA+ +WE+++ +R+ M+ G++ PG S IEV +H FV D SHP
Sbjct: 393 HNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHP 452
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
E+ L ++S+++ G+ P +KE L HSE+LA+A+GLL T
Sbjct: 453 EAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTP 512
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLR+CGDCH K ISA REI VRD RFH F +G CSC D+W
Sbjct: 513 MAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 14/282 (4%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANV---------FSFNVLLAAYARQLRIASARQLF 88
N F + + C + Q HANV F L+ YA+ I A ++F
Sbjct: 91 NTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVF 150
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLC 146
D+I +LV+++T+IS YA G AL LF+DM++ D T+ +I+ A+S L
Sbjct: 151 DEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALD 210
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K +H + ++ +L+ Y++ G ++ AK VF M +KD +W+SM+V
Sbjct: 211 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAM-PVKDTKAWSSMIVGL 269
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ +AL+ F M ++ + T +L+A + G ++ + +++ G +
Sbjct: 270 AINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSM 329
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
+ ++DL + S + D + E +P P+ V+W T++ G
Sbjct: 330 ELYGCMVDLLCRASL-VEDACTLVETMPISPNPVIWRTLLVG 370
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 31/144 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L TGK +HA K L+ LS + +Y+KCGC
Sbjct: 195 TMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGC----------- 243
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A+++FD +P D +++++I A G E AL F
Sbjct: 244 --------------------IERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFF 283
Query: 121 DMREKRFDTDGFTLSGLITASSNN 144
M E + + T G+++A +++
Sbjct: 284 RMEEAKVKPNHVTFIGVLSACAHS 307
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMY---SKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+QIHA + + + IS + + S G+++ AR+LF ++ N S NSMI G
Sbjct: 5 RQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRG 64
Query: 410 YAQ-HGIGMEALRLFEWMLETNIP-PTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFG 466
+Q E + LF M+ P P T VL AC+ + EGQ+ + +++K FG
Sbjct: 65 CSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFG 124
Query: 467 FEP 469
P
Sbjct: 125 SSP 127
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 241/713 (33%), Positives = 376/713 (52%), Gaps = 79/713 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYS-KCGCLSAAHHAFNQT 60
F Q+L+ C+ R + K++ A LK+ F A +S ++ S KCG
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKS--GFPAEISGSKLVDASLKCG------------ 113
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I ARQ+FD + + +V++N+LI+ ++ A+ +++
Sbjct: 114 -------------------DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR 154
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQL---HCLAIYCGFD-HYASVNNSLLTCYSR 176
M D +TLS + A S+ L L K+ H LA+ G + V ++L+ Y +
Sbjct: 155 LMITNNVLPDEYTLSSVFKAFSD-LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 213
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G EAK V + E KD V +++V Y Q E EA++ FQ M+ ++ + YT AS
Sbjct: 214 FGKTREAKLVLDRVEE-KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L + +L+D+ G H ++KSGF + L+ +Y +CS + D ++VF+ I P
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL-VDDSLRVFKCIEYP 331
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+ V W ++ISG Q + AL F+K+ R P+ + + CSNL+ G+QI
Sbjct: 332 NQVSWTSLISGLVQNGR-EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H + K ++ + + L+ +Y KCG + AR +FD + E + +SLN+MI YAQ+G
Sbjct: 391 HGIVTKYGFDRDKYA-GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKDMFGFEPEGEHY 474
G EAL LFE M+ + P ++T +SVL AC ++ V EG + F S KD +HY
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIML--TNDHY 507
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP 517
+CM+DLLGRAG+L +AE L + NP +A + L++EP
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP 566
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GSH 576
+ ++++N+YA++GKW V ++ M+D ++K P SW+E+ K+ H F+A D SH
Sbjct: 567 GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSH 626
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P ++I LEE+ +K K GYV D KE+ L HSEKLA+AF + +
Sbjct: 627 PNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NV 685
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I ++KNLR+C DCH+ IK +S + REI RD+ RFH F+DG CSCGDYW
Sbjct: 686 GGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 47/380 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL +C +D+ GK +H L +K+ F + L+ +QT
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKS--GFESALA--------------------SQT 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LL Y R + + ++F I P+ VS+ +LIS G E AL F+
Sbjct: 307 S---------LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + FTLS + S NL + +Q+H + GFD + L+ Y +
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCS-NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G D A+ VF + E+ D +S N+M+ +Y Q+ G EAL LF+ M++L L + T+ S+
Sbjct: 417 GCSDMARLVFDTLSEV-DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A + + G + K + + ++DL + +G + + + E+ PD
Sbjct: 476 LLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGR-AGRLEEAEMLTTEVINPD 534
Query: 298 LVLWNTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
LVLW T++S +K E +++ +K+ + P D + ++ SNL S GK
Sbjct: 535 LVLWRTLLSACKVHRKVEMAERIT---RKILEI--EPGDEGTLILM---SNLYASTGKWN 586
Query: 356 HALTIKIEIRSNRISVNNAL 375
+ +K +++ ++ N A+
Sbjct: 587 RVIEMKSKMKDMKLKKNPAM 606
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 313/562 (55%), Gaps = 36/562 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLT-CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
++Q+H I G S+ LL+ Y+ + +R+F+ + + D ++S++
Sbjct: 35 LQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPK-PDTFLFHSLITLT 93
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ E+L ++ M+ + YT ++++ + L G H H+ G+ ++
Sbjct: 94 SKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDA 153
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
++ + L+ YAK SG + KVF+++P+ +V WN+MISGY Q + +A+ F +
Sbjct: 154 YVQAALVSFYAK-SGHVMIARKVFDKMPEKTVVAWNSMISGYEQNG-FGKEAVELFFLMQ 211
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
+G PD +FV ++SAC+ + LG +H + N + + AL+ MYS+CGN+
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLN-VVLGTALMNMYSRCGNV 270
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
AR +FD M E N V+ +MI+GY HG G +A+ LF M P N+TFV+VLSAC
Sbjct: 271 SKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSAC 330
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE-AMPFNPG-- 502
AH G V EG++ F+ MK +G P EH CM+D+LGRAG L +A + I+ P P
Sbjct: 331 AHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPA 390
Query: 503 ---------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+ ++ A H L +EP N YVML+NIYA +G+ + V IR +M
Sbjct: 391 VWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMI 450
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEK--- 604
++K+ G+S I+V ++++F D SHP +I+ YL+E+ + ++AGY+P E
Sbjct: 451 RNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMH 510
Query: 605 ---------RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
L +HSEKLA+AFGLL T G I ++KNLR+C DCH AIK+IS IA REI
Sbjct: 511 EVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREI 570
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD RFH FKDG CSC DYW
Sbjct: 571 NVRDRLRFHHFKDGSCSCQDYW 592
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L++ YA+ + AR++FD++P+ +V++N++IS Y G + A+ LF M++ D
Sbjct: 159 LVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPD 218
Query: 131 GFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T L++A + + L +H FD + +L+ YSR G + +A+ VF
Sbjct: 219 SSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFD 278
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
M E K+ V+W +M+ YG H G +A++LF EM
Sbjct: 279 SMEE-KNIVAWTAMISGYGMHGHGSQAIELFNEM 311
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C + G +H +N + L + +YS+CG +S A F+
Sbjct: 221 TFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSM 280
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ N+ ++ +++ Y + A +LF+++ P+P+ V++ ++SA A G +
Sbjct: 281 EEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGR 340
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQL 151
+F M+++ GL+ + + +C++ L
Sbjct: 341 QIFTTMKQEY---------GLVPSVEHQVCMVDML 366
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 317/560 (56%), Gaps = 37/560 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQLH G + L+ Y L A +F + + ++ WN M+ Y
Sbjct: 21 KQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK-RNLFLWNVMIRGYAW 79
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ A+ L+ +M L D +T +L A ++L + G + H +I+SG + +
Sbjct: 80 NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ LID+YAKC G + +VF++I + D+V WN+M++ YSQ + D++L + +
Sbjct: 140 GAALIDMYAKC-GCVESARQVFDKIDERDVVCWNSMLATYSQNGQ-PDESLALCRVMAFN 197
Query: 329 GYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P + +FV I+A ++ L P GK++H + + SN V AL+ MY+K G++
Sbjct: 198 GLKPTEGTFVISIAASADNGLLPQ-GKELHGYSWRHGFESND-KVKTALMDMYAKSGSVN 255
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
AR LF+ + E VS N+MI GYA HG EAL LF+ M + + P +ITFV VL+AC+
Sbjct: 256 VARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACS 314
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL 506
H G + EG+ +F M F P +HY+CMIDLLG G+L +A +LI M P +
Sbjct: 315 HGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVW 374
Query: 507 KAANH-----------------FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
A H ++LEP + YV+L+N+YA +GKW+ VA +R LM ++
Sbjct: 375 GALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNK 434
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--------- 600
G++K SWIEV ++H F++ED SHP + I+ L+ + MK+AGY P
Sbjct: 435 GLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDV 494
Query: 601 -DKEK--RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
D EK + HSE+LA+AFGL+STS G +L++KNLRIC DCH AIKFIS I REIT+
Sbjct: 495 EDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITI 554
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD R+H FKDG CSCGD+W
Sbjct: 555 RDVNRYHHFKDGVCSCGDFW 574
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 143/268 (53%), Gaps = 5/268 (1%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
M AS+L + + + G Q HA + + G N + + L++LY C+ + + +F
Sbjct: 1 MSYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICN-SLTNAHLLF 59
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ I + +L LWN MI GY+ Y + A+ + ++ G PD +F V+ ACS LS
Sbjct: 60 DRISKRNLFLWNVMIRGYAWNGPY-ELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAM 118
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GK+IH I+ + S+ + V AL+ MY+KCG +E AR++FD++ E + V NSM+A
Sbjct: 119 EEGKKIHKDVIRSGLESD-VFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLAT 177
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y+Q+G E+L L M + PT TFV ++A A G + +G++ GFE
Sbjct: 178 YSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHG-YSWRHGFES 236
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + ++D+ ++G + A L E +
Sbjct: 237 NDKVKTALMDMYAKSGSVNVARSLFELL 264
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 40/310 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C + GK +H +++ + ++ I +Y+KCGC+ +A F++
Sbjct: 104 TFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKI 163
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V +N +LA Y+ Q QPD + A+ TE
Sbjct: 164 DERDVVCWNSMLATYS-------------QNGQPDESLALCRVMAFNGLKPTEGT----- 205
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
F +S I AS++N L K+LH + GF+ V +L+ Y+++G
Sbjct: 206 -----------FVIS--IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSG 252
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+ +F E+ E K VSWN+M+ Y H EAL LF+EM L D T +L
Sbjct: 253 SVNVARSLF-ELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLP-DHITFVGVL 310
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A S L+ + H + S F+ + + +IDL C G + + K+ E+ +
Sbjct: 311 AA-CSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHC-GRLEEAYKLIMEMRVE 368
Query: 296 PDLVLWNTMI 305
PD +W ++
Sbjct: 369 PDAGVWGALL 378
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 301/546 (55%), Gaps = 72/546 (13%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH-L 257
W +M+ Y E+ + M +G +T +++ A + ++ G Q HA +
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 258 IKSGFHQNSHIGSGLIDLYAKCS------------------------------GDMRDCM 287
+ GF + ++G+ +IDLY KC GDM
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F+++P D+V W M++GY+Q +AL F+K+ VG D+ + VISAC+ L
Sbjct: 230 GLFDDLPLKDMVAWTAMVTGYAQNGR-PKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 348 SPSLGKQIHALTIK-IEIRSN-----RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
G HA I+ I RS + V +AL+ MYSKCG+ ++A ++F+ M E N
Sbjct: 289 ----GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S +SMI GYA HG AL+LF ML+T I P +TF+ +LSAC+H G V +G++ F+ M
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------I 504
+ FG P +HY+CM+DLLGRAG L +A L++ MP P I
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDI 464
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AAN +LEP+ Y++L+NIYA++G+WEEV+ +R+++R++G +K PG SW E K
Sbjct: 465 AQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKN 524
Query: 565 -QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSE 611
++H F A D +HP EI L+++ +++ GY P +KE+ L+ HSE
Sbjct: 525 GEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSE 584
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLA+A+GLL T G+ I +MKN+RIC DCHN + S I GREI VRD RFH F +G C
Sbjct: 585 KLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTC 644
Query: 672 SCGDYW 677
SCG++W
Sbjct: 645 SCGNFW 650
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 160/313 (51%), Gaps = 11/313 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF + K C ++ GK +HA L Y+ N I LY KCG L A F++
Sbjct: 144 TFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDE 203
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+ L+ AYA+ + SA LFD +P D+V++ +++ YA G + AL F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYF 263
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYAS--VNNSLLTCY 174
+ M++ +TD TL+G+I+A + L +K + +A GF + V ++L+ Y
Sbjct: 264 QKMQDVGMETDEVTLAGVISACA-QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMY 322
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S+ G DEA +VF M E ++ S++SM++ Y H ALQLF +M+ ++ + T
Sbjct: 323 SKCGSPDEAYKVFEVMKE-RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTF 381
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
IL+A + + G Q A + K G + + ++DL + +G + + + + + +
Sbjct: 382 IGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGR-AGCLEEALDLVKTM 440
Query: 294 P-QPDLVLWNTMI 305
P +P+ +W ++
Sbjct: 441 PMEPNGGVWGALL 453
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HAH+I++G Q S++ + LI + K M + VF ++ P+ LW MI GY+
Sbjct: 60 QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYAL 119
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEIRSNRI 369
+ S ++ + ++ R G P +F + AC + L+ LGKQ+HA TI I ++ +
Sbjct: 120 QGLLS-ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS--------------------------- 402
V N+++ +Y KCG L AR++FD M E + VS
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238
Query: 403 ----LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+M+ GYAQ+G EAL F+ M + + +T V+SACA G V +
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHAN-WI 297
Query: 459 SMMKDMFGFEPEGEHY--SCMIDLLGRAGKLTDAERLIEAMP----FNPGSIALKAANH 511
+ + GF P G S +ID+ + G +A ++ E M F+ S+ L A H
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 234/702 (33%), Positives = 353/702 (50%), Gaps = 119/702 (16%)
Query: 15 LVTGKSLHALYLKNL------VPFSAYLSNHFILL--YSKCGCLSAAHHAFNQTQHANVF 66
L++G SL L + +PF + + LL Y + G L+ A F Q N
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV 144
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
S+ VLL R+ AR+LFD++P D+V++ ++S Y G A +LF +M ++
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 127 FDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ +SG Y++NG ++ A+++
Sbjct: 205 VVSWTAMISG-------------------------------------YAQNGEVNLARKL 227
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M E ++EVSW +M+V Y Q +A +LF M + +A+
Sbjct: 228 FEVMPE-RNEVSWTAMLVGYIQAGHVEDAAELFNAMPE-------HPVAA---------- 269
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ + GF Q G++D VFE++ + D W+ MI
Sbjct: 270 --------CNAMMVGFGQR-----GMVDA----------AKTVFEKMCERDDGTWSAMIK 306
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y Q E + +AL F+++ G P+ S + +++ C+ L+ G+++HA ++
Sbjct: 307 AYEQNE-FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFD 365
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
+ +V+ AL+ MY KCGNL+ A+R+F + V NSMI GYAQHG+G +AL +F
Sbjct: 366 MDVFAVS-ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + P IT++ L+AC++TGKV EG++ F+ M P EHYSCM+DLLGR+G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 486 KLTDAERLIEAMPFNP-----------------GSIALKAANHFLQLEPSNAVPYVMLAN 528
+ +A LI+ MP P IA AA L+LEP NA PYV+L++
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSH 544
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG-SHPMIKEIHNYLE 587
IY + G+WE+ + +R+ + R + K PG SWIE K++H+F + D +HP I LE
Sbjct: 545 IYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILE 604
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + ++GY D K L +HSE+ AVA+GLL G PI VMKNLR
Sbjct: 605 KLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCH+AIK I+ I REI +RD RFH FKDG CSC DYW
Sbjct: 665 VCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 156/372 (41%), Gaps = 55/372 (14%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+LL Y RN D A +F M +D S+N+++ R+ L + S+
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPS-RDLASYNALISGLSLRRQTLP--DAAAALASIPF 108
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ + S+L + L ++ + + + + GL+D +G + +
Sbjct: 109 PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLD-----AGRVNEAR 163
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSN 346
++F+E+P D+V W M+SGY Q + +A F ++ + S+ +IS N
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRIT-EARALFDEMPKRNV----VSWTAMISGYAQN 218
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+L +++ E+ R V+ A++ Y + G++EDA LF+ MPEH + N+
Sbjct: 219 GEVNLARKL------FEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNA 272
Query: 406 MIAGYAQHGIG-------------------------------MEALRLFEWMLETNIPPT 434
M+ G+ Q G+ MEAL F ML + P
Sbjct: 273 MMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPN 332
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ +S+L+ CA + G++ + M F+ + S +I + + G L A+R+
Sbjct: 333 YPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 495 EAMPFNPGSIAL 506
F P I +
Sbjct: 392 HT--FEPKDIVM 401
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 38/157 (24%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI- 431
NA +A ++ GN+E AR F+ MP T S N+++AGY ++ + AL LF M ++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 432 ----------------------------PPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
PP+ ++F S+L G +A+ + F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 464 MFGFEPEGEH--YSCMIDLLGRAGKLTDAERLIEAMP 498
PE H Y+ ++ L AG++ +A RL + MP
Sbjct: 139 -----PERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 44/251 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C L G+ +HA L+ + + I +Y KCG L A F+ + +
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKD 398
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ V +N++I+ YA G E AL +F DMR
Sbjct: 399 I-------------------------------VMWNSMITGYAQHGLGEQALGIFHDMRL 427
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSRN 177
DG T G +TA S + + +I G +HY+ + + L R+
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL----GRS 483
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTLAS 236
G ++EA + M D V W +++ A HR A ++++ L+ G Y L S
Sbjct: 484 GLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLS 543
Query: 237 -ILTAFTSLED 246
I T+ ED
Sbjct: 544 HIYTSVGRWED 554
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 237/714 (33%), Positives = 364/714 (50%), Gaps = 78/714 (10%)
Query: 30 VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFD 89
+P S + + S CG H F+ + SF+ L + R+ R R F
Sbjct: 3 IPLSRNQNMSMDQIQSNCGL----PHLFSVDEILREKSFSQRLLPFNRRKR----RTPFS 54
Query: 90 QI--------------PQPDLVSYNTLISAYAD-----------CGDTE---------SA 115
QI P+P + N A + CG E A
Sbjct: 55 QIRCSSLEQGLQPRPKPKPSTIELNVGKEAQVNETQLRKPSSELCGQIEKLVFFKRYHEA 114
Query: 116 LSLFKDMR-EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
L LF+ + +D D T L++A ++ +K++ I G D + N +L
Sbjct: 115 LELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLL 174
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
+ + G + +A+R+F EM E K+ +SWN+++ + EA +LF M
Sbjct: 175 MHVKCGMMIDARRLFDEMPE-KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSR 233
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+++ A L + G Q H+ +K+G + + LID+Y+KC G + D VF++
Sbjct: 234 MFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKC-GSIEDAQCVFDQ 292
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSL 351
+P+ V WN++I+GY+ YS++AL + ++ G D+ +F +I C+ L S
Sbjct: 293 MPEKTTVGWNSIIAGYAL-HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEH 351
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
KQ HA ++ + I N ALV +YSK G +EDA+ +FD MP N +S N++IAGY
Sbjct: 352 AKQAHAGLVRHGFGLD-IVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG G+EA+ +FE ML + P ++TF++VLSAC+++G G + F M +P
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQ 514
HY+CMI+LLGR G L +A LI+ PF P + AA
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
+ P YV+L NIY SG+ EE A + + ++ RG++ P SWIE+KKQ + F++ D
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVP-----------DKEKRLVHHSEKLAVAFGLLSTS 623
H KEI+ L+E+ ++ + GYVP +E+ L++HSEKLA+AFGL++TS
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLINTS 650
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ ++++ RICGDCH+AIK I+ + REI VRD RFH FKDG CSCGDYW
Sbjct: 651 DWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 159/355 (44%), Gaps = 42/355 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +++ G + G+ LH+ LK V +++ I +YSKCG + A F+Q
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ-- 292
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+P+ V +N++I+ YA G +E ALS++ +
Sbjct: 293 -----------------------------MPEKTTVGWNSIIAGYALHGYSEEALSMYYE 323
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
MR+ D FT S +I A +L KQ H + GF N +L+ YS+ G
Sbjct: 324 MRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGR 383
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++AK VF +M K+ +SWN+++ YG H G+EA+++F+ M+ + + T ++L+
Sbjct: 384 IEDAKHVF-DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLS 442
Query: 240 A--FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A ++ L D G F + + + +I+L + G + + + ++ P +P
Sbjct: 443 ACSYSGLSDR-GWEIFESMSRDHKIKPRAMHYACMIELLGR-EGLLDEAFALIKDAPFKP 500
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+ +W +++ + + LG F G P+ S V+ N S L
Sbjct: 501 TVNMWAALLTACRVHKNFE---LGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRL 552
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +++ C L K HA +++ + + LYSK G + A H F+
Sbjct: 335 TFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMM 394
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
H NV S+N L+A Y R A ++F+++ P+ V++ ++SA + G ++
Sbjct: 395 PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGW 454
Query: 117 SLFKDM 122
+F+ M
Sbjct: 455 EIFESM 460
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/591 (36%), Positives = 320/591 (54%), Gaps = 66/591 (11%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+LH I GFD + ++N+LL Y + G + +A ++F EM +D VSW S++ A+ +
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN-RDHVSWASILTAHNKA 82
Query: 210 REGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
L + M + L D + A I+ A +SL L G Q HA + S F + +
Sbjct: 83 LIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVV 142
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ----------------KE 312
S LID+Y KC G D VF+ I + V W +MISGY++ +
Sbjct: 143 KSSLIDMYTKC-GQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201
Query: 313 EYSDQAL--------------GCFKKLNRVGYH-PDDCSFVCVISACSNLSP-SLGKQIH 356
+S AL F ++ R G D V+ C+NL+ LGKQIH
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIH 261
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
L I + S + ++NALV MY+KC ++ A+ +F RMP + +S S+I G AQHG
Sbjct: 262 GLVIALGFESC-LFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL L++ M+ + I P +TFV +L AC+H G V+ G++ F M + P +HY+C
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTC 380
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
++DLL R+G L +AE L++ +PF P + ++ A+ L L+P +
Sbjct: 381 LLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPED 440
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA-EDGSHPM 578
Y++L+N+YA + W V+ +R+LM V+K+PG+S I+ K VF A E HPM
Sbjct: 441 PSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPM 500
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
EI N L+++ +M++ GYVP +KEK+L HSE+LAVA+GLL G
Sbjct: 501 KNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGT 560
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRICGDCHN +KFIS I REI VRD R+H FK+G+CSC D+W
Sbjct: 561 IIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 224/501 (44%), Gaps = 75/501 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F L+ C R+ LH+ +K S+ LSN + +Y KCG
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGL------------ 53
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
I A QLFD++P D VS+ ++++A+ LS+
Sbjct: 54 -------------------IPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNT 94
Query: 122 M-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M D F + ++ A S+ L L KQ+H + F V +SL+ Y++ G
Sbjct: 95 MFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCG 154
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE-----------MVS--L 225
D+A+ VF + K+ VSW SM+ Y + EA+ LF + ++S +
Sbjct: 155 QPDDARAVFDSI-LFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLI 213
Query: 226 QLGLDMYT-------------------LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q G +Y+ L+S++ +L L G Q H +I GF
Sbjct: 214 QSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCL 273
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
I + L+D+YAKCS D+ +F +P+ D++ W ++I G +Q + +++AL + ++
Sbjct: 274 FISNALVDMYAKCS-DILAAKDIFYRMPRKDVISWTSIIVGTAQHGK-AEEALTLYDEMV 331
Query: 327 RVGYHPDDCSFVCVISACSNLS-PSLGKQI-HALTIKIEIRSNRISVNNALVAMYSKCGN 384
P++ +FV ++ ACS+ S G+++ ++T I + + L+ + S+ G+
Sbjct: 332 LSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPS-LQHYTCLLDLLSRSGH 390
Query: 385 LEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI--PPTNITFVSV 441
L++A L D++P + + + S+++ +H +R+ + +L+ P T I +V
Sbjct: 391 LDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNV 450
Query: 442 LSACAHTGKVAEGQKYFSMMK 462
+ G V++ +K S M+
Sbjct: 451 YAGAEMWGSVSKVRKLMSSME 471
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +++ C L GK +HA ++ + + + I +Y+KCG A F+
Sbjct: 107 VFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSI 166
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S+ +++ YAR R A LF Q P +L S+ LIS G + SLF
Sbjct: 167 LFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFN 226
Query: 121 DMREKRFD-TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+MR + D D LS ++ +N L L KQ+H L I GF+ ++N+L+ Y++
Sbjct: 227 EMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKC 286
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+ AK +FY M KD +SW S++V QH + EAL L+ EMV ++ + T +
Sbjct: 287 SDILAAKDIFYRMPR-KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGL 345
Query: 238 LTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
L A + + G + F + + + + L+DL ++ SG + + + ++IP +
Sbjct: 346 LYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSR-SGHLDEAENLLDKIPFK 404
Query: 296 PDLVLWNTMISG 307
PD W +++S
Sbjct: 405 PDEPTWASLLSA 416
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/655 (32%), Positives = 346/655 (52%), Gaps = 38/655 (5%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A A+V+ N L+A YA+ R+ A ++F + D VS+NTL+S A
Sbjct: 274 ALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDA 333
Query: 116 LSLFKDMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
L+ F+DM+ D ++ LI AS S NL K++H AI G D + N+L+
Sbjct: 334 LNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDM 393
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ + F M E KD +SW +++ Y Q+ LEA+ LF+++ + +D
Sbjct: 394 YAKCCCVKHMGYAFECMHE-KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMM 452
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ S+L A + L+ + H ++ K + + + ++++Y + G + FE I
Sbjct: 453 IGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEV-GHRDYARRAFESI 510
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
D+V W +MI+ +AL F L + PD + + +SA +NLS G
Sbjct: 511 RSKDIVSWTSMITCCVHNG-LPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K+IH I+ + ++LV MY+ CG +E++R++F + + + + SMI
Sbjct: 570 KEIHGFLIRKGFFLEG-PIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGM 628
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG G EA+ LF+ M + N+ P +ITF+++L AC+H+G + EG+++F +MK + EP E
Sbjct: 629 HGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPE 688
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQL 515
HY+CM+DLL R+ L +A + + +MP P S + AA LQ
Sbjct: 689 HYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQS 748
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ N+ Y +++NI+AA G+W +V +R M+ G++K PG SWIEV ++H F+A D S
Sbjct: 749 DTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKS 808
Query: 576 HPMIKEIHNYLEEMSRKM-KQAGYVP------------DKEKRLVHHSEKLAVAFGLLST 622
HP +I+ L + ++ + K+ GY+ +K + L HSE+LA+ +GLL T
Sbjct: 809 HPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVT 868
Query: 623 SYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KNLRIC DCH K S ++ R + VRD RFH F+ G CSCGD+W
Sbjct: 869 PKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 251/508 (49%), Gaps = 54/508 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C + G +H + +K ++ N I +Y KCG
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCG------------ 194
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI--PQPDLVSYNTLISAYADCGDTESALSL 118
+ AR LFD I + D VS+N++ISA+ G ALSL
Sbjct: 195 -------------------DLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSL 235
Query: 119 FKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYAS--VNNSLLTCY 174
F+ M+E ++ +T + + + L +H A+ +H+A V N+L+ Y
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKS--NHFADVYVANALIAMY 293
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G +++A+RVF M +D VSWN+++ Q+ +AL F++M + D ++
Sbjct: 294 AKCGRMEDAERVFASM-LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSV 352
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK----VF 290
+++ A +L+ G + HA+ I++G N IG+ LID+YAKC C+K F
Sbjct: 353 LNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCC-----CVKHMGYAF 407
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SP 349
E + + DL+ W T+I+GY+Q E + +A+ F+K+ G D V+ ACS L S
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNECHL-EAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+ ++IH K ++ I + NA+V +Y + G+ + ARR F+ + + VS SMI
Sbjct: 467 NFIREIHGYVFKRDLAD--IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITC 524
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+G+ +EAL LF + +TNI P +I +S LSA A+ + +G++ + GF
Sbjct: 525 CVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK-GFFL 583
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
EG S ++D+ G + ++ ++ ++
Sbjct: 584 EGPIASSLVDMYACCGTVENSRKMFHSV 611
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 241/504 (47%), Gaps = 56/504 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L CV + L G+ LHA LK+ SA+L+ + +Y KCG L
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLK------------- 96
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
A ++FD++ + + ++N ++ A+ G A+ L+K+MR
Sbjct: 97 ------------------DAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRV 138
Query: 125 KRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D T ++ A L ++H +A+ CGF + V N+L+ Y + G L
Sbjct: 139 LGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGG 198
Query: 183 AKRVFYE--MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A RV ++ M E +D VSWNS++ A+ + LEAL LF+ M + + + YT + L
Sbjct: 199 A-RVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQG 257
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ G+ H +KS + ++ + LI +YAKC G M D +VF + D V
Sbjct: 258 VEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKC-GRMEDAERVFASMLCRDYVS 316
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHAL 358
WNT++SG Q E Y D AL F+ + PD S + +I+A S S +L GK++HA
Sbjct: 317 WNTLLSGLVQNELYRD-ALNYFRDMQNSAQKPDQVSVLNLIAA-SGRSGNLLNGKEVHAY 374
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + SN + + N L+ MY+KC ++ F+ M E + +S ++IAGYAQ+ +E
Sbjct: 375 AIRNGLDSN-MQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLE 433
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM- 477
A+ LF + + + SVL AC+ G K + ++++ G+ + + M
Sbjct: 434 AINLFRKVQVKGMDVDPMMIGSVLRACS-------GLKSRNFIREIHGYVFKRDLADIML 486
Query: 478 ----IDLLGRAGKLTDAERLIEAM 497
+++ G G A R E++
Sbjct: 487 QNAIVNVYGEVGHRDYARRAFESI 510
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+Q+HA +K + + + L+ MY KCG+L+DA ++FD M E + N+M+ +
Sbjct: 65 GQQLHARLLKSHLSA---FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFV 121
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
G +EA+ L++ M + TF SVL AC G+ G + + GF
Sbjct: 122 SSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKC-GFGEFV 180
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
+ +I + G+ G L A L + + +E + V + + + +
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDG----------------IMMEKEDTVSWNSIISAHV 224
Query: 532 ASGKWEEVATIRRLMRDRGV 551
GK E ++ R M++ GV
Sbjct: 225 TEGKCLEALSLFRRMQEVGV 244
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 226/646 (34%), Positives = 349/646 (54%), Gaps = 69/646 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F+ IP+P+ + +N + +A D SAL L+ M + FT L+ A
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF-------------- 187
S +Q+H + GFD V+ SL++ Y++NG L++A++VF
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 188 ----------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
++ IKD VSWN+M+ Y + +AL+LF+EM+ + D
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+A++++A + G Q H+ + GF N I + LIDLY+KC G++ ++ E
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC-GEVETACELLE 266
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 267 GLSNKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 325
Query: 351 LGKQIHALT---IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSM 406
+G+ IH +K + +N S+ +L+ MY+KCG+++ A ++ D + ++S N+M
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAM 385
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G+A HG A +F M + I P +ITFV +LSAC+H+G + G+ F M+ +
Sbjct: 386 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN 445
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------A 509
P+ EHY CMIDLLG +G +AE +I MP P + LKA A
Sbjct: 446 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 505
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK-PGFSWIEVKKQMHV 568
+++EP N YV+L+NIYA +GKW EV IR L+ D+G++KK PG S IE+ +H
Sbjct: 506 KKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHE 565
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F+ D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+A
Sbjct: 566 FIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 625
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
FGL+ST G + ++KNLR+C +CH A K IS I REI RD R
Sbjct: 626 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 320/571 (56%), Gaps = 35/571 (6%)
Query: 138 ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
+ ++ +L ++Q H + G ++ LLT G + +R+F + + D
Sbjct: 16 VVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSD-PDSF 74
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
+NS++ A + L+A+ ++ M+ ++ YT S++ A L L G H+H+
Sbjct: 75 LFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHV 134
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
SG+ +S + + LI YAK S R KVF+E+PQ +V WN+MISGY Q +++
Sbjct: 135 FVSGYASDSFVQAALIAFYAK-SCTPRVARKVFDEMPQRSIVAWNSMISGYEQNG-LANE 192
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F K+ PD +FV V+SACS L S G +H + I N + + +LV
Sbjct: 193 AVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMN-VVLATSLV 251
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
M+S+CG++ AR +F M E N V +MI+GY HG G+EA+ +F M + P ++
Sbjct: 252 NMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSV 311
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TFV+VLSACAH G + EG+ F+ MK +G P EH+ CM+D+ GR G L +A + ++
Sbjct: 312 TFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKG 371
Query: 497 MPFN---PG---------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
+ + P + ++ A + + EP N YV+L+N+YA +G+ +
Sbjct: 372 LNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDR 431
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
V ++R +M RG++K+ G+S I+V + ++F D SHP EI+ +L+E+ + K AGY
Sbjct: 432 VESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGY 491
Query: 599 VP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
P ++E L +HSEKLAVAFGL+ T G + ++KNLRIC DCH+AIKF
Sbjct: 492 APVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKF 551
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ISA+ REI VRD RFH F++G CSC DYW
Sbjct: 552 ISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F ++ F L+A YA+ AR++FD++PQ +V++N++IS Y G
Sbjct: 133 HVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANE 192
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F MRE R + D T +++A S +L LH + G + SL+
Sbjct: 193 AVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVN 252
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
+SR G + A+ VFY M E + V W +M+ YG H G+EA+++F M + + +
Sbjct: 253 MFSRCGDVGRARAVFYSMIE-GNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSV 311
Query: 233 TLASILTA 240
T ++L+A
Sbjct: 312 TFVAVLSA 319
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 306/562 (54%), Gaps = 67/562 (11%)
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G L A+ VF ++ + NS++ Y +A+ +Q M+ L D +T S
Sbjct: 25 SGSLPYARLVFNQIPN-PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPS 83
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ F S L G Q H H K GF +++I + L+++Y+ C G + KVF+++
Sbjct: 84 L---FKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNC-GCLVSARKVFDKMVNK 139
Query: 297 DLVLWNTMISGYSQKE-----------------------------EYSD--QALGCFKKL 325
+V W TMI Y+Q + E SD +AL F ++
Sbjct: 140 SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G D + ++ AC++L LGK +H K +I + +++ ALV MY+KCG+
Sbjct: 200 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD-VALGTALVDMYAKCGS 258
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+E A R+F MPE + ++ ++I G A G G++AL LF M + + P ITFV VL+A
Sbjct: 259 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-- 502
C+H G V EG YF+ M + +G +P EHY CM+D+LGRAG++ +AE LI+ MP P
Sbjct: 319 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYF 378
Query: 503 ---------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+A +AA ++L+P N YV+L+NIY++ WE +R LM
Sbjct: 379 VLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMV 438
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------ 601
+R ++K PG S IEV +H FV D SHP EI+ L++M R++K AGYVPD
Sbjct: 439 ERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLF 498
Query: 602 ------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREI 655
KE L HSEKLA+AFGLLST+ G PI V+KNLR+C DCH+A+KFIS + REI
Sbjct: 499 DMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREI 558
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F G CSC D+W
Sbjct: 559 IVRDRNRFHHFTKGSCSCRDFW 580
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 7/243 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + K+C L GK LH K AY+ N + +YS CGCL +A F++
Sbjct: 80 TFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM 136
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLF 119
+ +V S+ ++ AYA+ A +LF ++ +L +N +I+ + + D E ALSLF
Sbjct: 137 VNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLF 196
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+M+ D T++ L+ A ++ L L K LH + ++ +L+ Y++
Sbjct: 197 NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 256
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ A RVF EM E KD ++W +++V +GL+AL+LF EM ++ D T +
Sbjct: 257 GSIESAMRVFQEMPE-KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGV 315
Query: 238 LTA 240
L A
Sbjct: 316 LAA 318
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 31/143 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK LH K + L + +Y+KCG
Sbjct: 210 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG------------ 257
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I SA ++F ++P+ D++++ LI A CG AL LF
Sbjct: 258 -------------------SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFH 298
Query: 121 DMREKRFDTDGFTLSGLITASSN 143
+M+ D T G++ A S+
Sbjct: 299 EMQMSEVKPDAITFVGVLAACSH 321
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 229/663 (34%), Positives = 350/663 (52%), Gaps = 48/663 (7%)
Query: 49 CLSAAH-HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
C A H HA + A++F LL Y + + A +F +P DLV++N +++ YA
Sbjct: 28 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 87
Query: 108 DCGDTESALS--LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY-CGFDH 162
G A++ L M+ R + TL L+ A L +H I C +
Sbjct: 88 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPN 147
Query: 163 YAS---------VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
S + +LL Y++ G L A+RVF M ++EV+W++++ +
Sbjct: 148 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEVTWSALIGGFVLCSRMT 206
Query: 214 EALQLFQEMVSLQLG-LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
+A LF+ M++ L L ++AS L A SL+ L G Q HA L KSG H + G+ L
Sbjct: 207 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 266
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+ +YAK +G + + +F+E+ D V ++ ++SGY Q +++A FKK+ P
Sbjct: 267 LSMYAK-AGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEP 324
Query: 333 DDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
D + V +I ACS+L+ + ++ I ++ S+ NAL+ MY+KCG ++ +R++F
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+ MP + VS N+MIAGY HG+G EA LF M PP +TF+ +LSAC+H+G V
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---------- 502
EG+ +F +M +G P EHY CM+DLL R G L +A I++MP
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
Query: 503 -------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
+ K + +L P +V+L+NIY+A+G+++E A +R + + +G +K P
Sbjct: 505 CRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSP 564
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------ 603
G SWIE+ +H FV D SHP EI+ L+ + +K+ GY PD
Sbjct: 565 GCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKE 624
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
K L+ HSEKLA+A+G+LS S + I V KNLR+CGDCH IK IS + R I VRD RF
Sbjct: 625 KALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRF 684
Query: 664 HCF 666
H F
Sbjct: 685 HHF 687
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 154/337 (45%), Gaps = 40/337 (11%)
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
YT L A ++L D G H H I +G + + + L+D+Y KC+ + D +F
Sbjct: 11 YTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC-LPDAAHIFA 69
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQA---LGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+P DLV WN M++GY+ Y L +++R+ P+ + V ++ +
Sbjct: 70 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQG 127
Query: 349 P-SLGKQIHALTIKIEIRSNR---------ISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+ G +HA I+ + NR + + AL+ MY+KCG+L ARR+FD MP
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETN---IPPTNITFVSVLSACAHTGKVAEGQ 455
N V+ +++I G+ +A LF+ ML + PT+I S L ACA + G+
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGE 245
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQL 515
+ +++ G + + ++ + +AG + A IAL F ++
Sbjct: 246 QLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQA-------------IAL-----FDEM 286
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ V Y L + Y +G+ EE + + M+ V+
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 149/343 (43%), Gaps = 64/343 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ L+ C L G+ LHAL K+ V
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGV------------------------------ 256
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
HA++ + N LL+ YA+ I A LFD++ D VSY+ L+S Y G E A +FK
Sbjct: 257 -HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D T+ LI A S+ L + H I G S+ N+L+ Y++ G
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D +++VF M +D VSWN+M+ YG H G EA LF EM +L D T +L
Sbjct: 376 RIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 434
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG------------LIDLYAKCSGDMRDC 286
+A + H+ L+ G H +G G ++DL ++ G + +
Sbjct: 435 SACS-----------HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR-GGFLDEA 482
Query: 287 MKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ + +P + D+ +W ++ Y + LG KK++R+
Sbjct: 483 YEFIQSMPLRADVRVWVALLGAC---RVYKNIDLG--KKVSRM 520
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 302/526 (57%), Gaps = 35/526 (6%)
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M E D V +NS+ Y + LE LF E++ L D YT S+L A
Sbjct: 84 ARHLFDAMSE-PDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACA 142
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
+ L G Q H +K G N ++ LI++Y +C D+ VF+ I +P +V +N
Sbjct: 143 VAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECE-DVDAARCVFDRIVEPCVVCYN 201
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIK 361
MI+GY+++ ++AL F+++ P++ + + V+S+C+ L S LGK IH K
Sbjct: 202 AMITGYARRNR-PNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKK 260
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ VN AL+ M++KCG+L+DA +F+ M +T + ++MI YA HG ++
Sbjct: 261 HGF-CKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSML 319
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+FE M N+ P ITF+ +L+AC+HTG V EG++YFS M FG P +HY M+DLL
Sbjct: 320 MFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLL 379
Query: 482 GRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYV 524
GRAG L DA I+ +P +P +A K + L+L+ S+ YV
Sbjct: 380 GRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYV 439
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N+YA + KWE V ++R++M+DR K PG S IEV +H F + DG ++H
Sbjct: 440 ILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHR 499
Query: 585 YLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
L+EM +++K AGYVPD KE L +HSEKLA+AFGLL+T G I V+
Sbjct: 500 ALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVV 559
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+C DCH+A K IS I GR++ +RD RFH F+DG+CSC D+W
Sbjct: 560 KNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 23/405 (5%)
Query: 41 ILLYSKCGCLSAAHH--AFNQTQHANVFSFNVLLAAYARQLRIAS----ARQLFDQIPQP 94
ILL SKC A+ H SFN L + + S AR LFD + +P
Sbjct: 35 ILLISKCNSERELMQIQAYAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEP 94
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLH 152
D+V +N++ Y+ + +LF ++ E D +T L+ A + L +QLH
Sbjct: 95 DIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLH 154
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
CL++ G D V +L+ Y+ +D A+ VF + E V +N+M+ Y +
Sbjct: 155 CLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVE-PCVVCYNAMITGYARRNRP 213
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL LF+EM L + TL S+L++ L L G H + K GF + + + L
Sbjct: 214 NEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTAL 273
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID++AKC G + D + +FE + D W+ MI Y+ + ++ ++ F+++ P
Sbjct: 274 IDMFAKC-GSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQ-AENSMLMFERMRSENVQP 331
Query: 333 DDCSFVCVISACSNLS-PSLGKQ-----IHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
D+ +F+ +++ACS+ G++ +H I I+ ++V + + G+LE
Sbjct: 332 DEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKH-----YGSMVDLLGRAGHLE 386
Query: 387 DARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFEWMLETN 430
DA D++P T L ++A + H A ++ E +LE +
Sbjct: 387 DAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELD 431
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 39/314 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ LH L +K V + Y+ I +Y++C + AA F++
Sbjct: 133 TFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRI 192
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
V +N ++ YAR+ R ALSLF+
Sbjct: 193 VEPCVVCYNAMITGYARRNR-------------------------------PNEALSLFR 221
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ K + TL ++++ + +L L K +H A GF Y VN +L+ +++ G
Sbjct: 222 EMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCG 281
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A +F M KD +W++M+VAY H + ++ +F+ M S + D T +L
Sbjct: 282 SLDDAVSIFENM-RYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLL 340
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + G ++ + ++ G + H GS ++DL + +G + D + +++P
Sbjct: 341 NACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGS-MVDLLGR-AGHLEDAYEFIDKLPIS 398
Query: 296 PDLVLWNTMISGYS 309
P +LW +++ S
Sbjct: 399 PTPMLWRILLAACS 412
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 226/715 (31%), Positives = 354/715 (49%), Gaps = 86/715 (12%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G LH K L N+ I +Y+KCG L A F + NV
Sbjct: 233 LRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNV--------- 283
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE-KRFDTDGFT 133
VS+ L+ + GD L L +MR + +T
Sbjct: 284 ----------------------VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYT 321
Query: 134 LSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
LS + A + ++ +H L + G++ + V +SL+ YS+ G + +A+RVF G
Sbjct: 322 LSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAG 381
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL------QLGLDMYTLASILTAFTSLE 245
+ +WN+M+ Y G +AL +F+EM Q D +T AS+L A L
Sbjct: 382 LGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLG 441
Query: 246 DLVGGLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
G Q HA + SGF N+ + L+D+Y KC G + M+VFE + + + + W T
Sbjct: 442 APREGAQVHAAMAASGFSTASNAILAGALVDMYVKC-GRLPVAMQVFERLERKNAIQWTT 500
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKI 362
++ G++Q+ + +AL F++ R G D ++ ++ + G+Q+H +K
Sbjct: 501 VVVGHAQEGQVM-EALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKS 559
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
++ +S N++V MY KCG ++A R+F +P N VS +MI G +HG+G EA+ +
Sbjct: 560 PAGTD-VSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAM 618
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
FE M + P +T++++LSAC+H G V E ++YFS ++ P+ EHY+CM+DLLG
Sbjct: 619 FEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLG 678
Query: 483 RAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVM 525
RAG+L +A LI MP P ++ +A + L ++ N V YV
Sbjct: 679 RAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVT 738
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV--AEDGSHPMIKEIH 583
L+N++A +G W E +R MR RG++K+ G SW+E+ K++H F ++ +HP +I
Sbjct: 739 LSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIR 798
Query: 584 NYLEEM-SRKMKQAGYVPDKEKRLVH-------------HSEKLAVAFGLLSTS------ 623
L ++ +R +Q GY D + +H HSE+LAV LL
Sbjct: 799 RVLRDVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGG 858
Query: 624 -YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ +PI V KNLR+CGDCH K +SA+ R + VRD RFH F+ G CSC DYW
Sbjct: 859 GHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 160/362 (44%), Gaps = 52/362 (14%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+A +L A L GG+Q H L K GF ++ +G+ LID+YAKC G++ +VF +
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKC-GELDMAGEVFGGM 278
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV----GYHPDDCSFVCVISAC---SN 346
++V W ++ G+ Q + A GC + L + P++ + + AC +
Sbjct: 279 RDRNVVSWTALMVGFLQHGD----ATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTED 334
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNS 405
+ +G IH L ++ + + V ++LV +YSK G + DARR+FD + N+
Sbjct: 335 MGAGVG--IHGLCVRTGYEEHYV-VASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNA 391
Query: 406 MIAGYAQHGIGMEALRLFEWML------ETNIPPTNITFVSVLSACAHTGKVAEG-QKYF 458
MI+GYA G G +AL +F M E P TF S+L AC G EG Q +
Sbjct: 392 MISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHA 451
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+M F ++D+ + G+L A ++ E +LE
Sbjct: 452 AMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFE------------------RLERK 493
Query: 519 NAVPYVMLANIYAASGK-WEEVATIRRLMRDRG----------VQKKPGFSWIEVKKQMH 567
NA+ + + +A G+ E + RR R V F+ +E +Q+H
Sbjct: 494 NAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVH 553
Query: 568 VF 569
+
Sbjct: 554 CY 555
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 320/591 (54%), Gaps = 66/591 (11%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+LH I GFD + ++N+LL Y + G + +A ++F EM +D VSW S++ A+ +
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN-RDHVSWASILTAHNKA 82
Query: 210 REGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
L + M + L D + A I+ A +SL L G Q HA + S F + +
Sbjct: 83 LIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVV 142
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ----------------KE 312
S LID+Y KC G + VF+ I + V W +MISGY++ +
Sbjct: 143 KSSLIDMYTKC-GQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201
Query: 313 EYSDQAL--------------GCFKKLNRVGYH-PDDCSFVCVISACSNLSP-SLGKQIH 356
+S AL F ++ R G D V+ C+NL+ LGKQIH
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIH 261
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
L I + S + ++NALV MY+KC ++ A+ +F RMP + +S S+I G AQHG
Sbjct: 262 GLVIALGFESC-LFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EAL L++ M+ + I P +TFV +L AC+H G V+ G++ F M + P +HY+C
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTC 380
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSN 519
++DLL R+G L +AE L++ +PF P + ++ A+ L L+P +
Sbjct: 381 LLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPED 440
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA-EDGSHPM 578
Y++L+N+YA + W V+ +R+LM V+K+PG+S I+ K VF A E HPM
Sbjct: 441 PSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPM 500
Query: 579 IKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE 626
EI N L+++ +M++ GYVP +KEK+L HSE+LAVA+GLL G
Sbjct: 501 KNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGT 560
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRICGDCHN +KFIS I REI VRD R+H FK+G+CSC D+W
Sbjct: 561 IIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 224/501 (44%), Gaps = 75/501 (14%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F L+ C R+ LH+ +K S+ LSN + +Y KCG
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGL------------ 53
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
I A QLFD++P D VS+ ++++A+ LS+
Sbjct: 54 -------------------IPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNT 94
Query: 122 M-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M D F + ++ A S+ L L KQ+H + F V +SL+ Y++ G
Sbjct: 95 MFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCG 154
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE-----------MVS--L 225
DEA+ VF + K+ VSW SM+ Y + EA+ LF + ++S +
Sbjct: 155 QPDEARAVFDSI-LFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLI 213
Query: 226 QLGLDMYT-------------------LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
Q G +Y+ L+S++ +L L G Q H +I GF
Sbjct: 214 QSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCL 273
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
I + L+D+YAKCS D+ +F +P+ D++ W ++I G +Q + +++AL + ++
Sbjct: 274 FISNALVDMYAKCS-DILAAKDIFYRMPRKDVISWTSIIVGTAQHGK-AEEALTLYDEMV 331
Query: 327 RVGYHPDDCSFVCVISACSNLS-PSLGKQI-HALTIKIEIRSNRISVNNALVAMYSKCGN 384
P++ +FV ++ ACS+ S G+++ ++T I + + L+ + S+ G+
Sbjct: 332 LSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPS-LQHYTCLLDLLSRSGH 390
Query: 385 LEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI--PPTNITFVSV 441
L++A L D++P + + + S+++ +H +R+ + +L+ P T I +V
Sbjct: 391 LDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNV 450
Query: 442 LSACAHTGKVAEGQKYFSMMK 462
+ G V++ +K S M+
Sbjct: 451 YAGAEMWGSVSKVRKLMSSME 471
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +++ C L GK +HA ++ + + + I +Y+KCG A F+
Sbjct: 107 VFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSI 166
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N S+ +++ YAR R A LF Q P +L S+ LIS G + SLF
Sbjct: 167 LFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFN 226
Query: 121 DMREKRFD-TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+MR + D D LS ++ +N L L KQ+H L I GF+ ++N+L+ Y++
Sbjct: 227 EMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKC 286
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+ AK +FY M KD +SW S++V QH + EAL L+ EMV ++ + T +
Sbjct: 287 SDILAAKDIFYRMPR-KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGL 345
Query: 238 LTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
L A + + G + F + + + + L+DL ++ SG + + + ++IP +
Sbjct: 346 LYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSR-SGHLDEAENLLDKIPFK 404
Query: 296 PDLVLWNTMISG 307
PD W +++S
Sbjct: 405 PDEPTWASLLSA 416
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/368 (48%), Positives = 240/368 (65%), Gaps = 31/368 (8%)
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
++ AC++++ GKQ+HA IKI + +SV+N LV MY KCG +EDA+ +F ++ E
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELD-VSVSNGLVDMYGKCGRIEDAQEVFSKLLEP 62
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ S N+MI+G AQHG G EA+ LFE ML+T + P ITFV VLS C+H G V EG+ YF
Sbjct: 63 DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--------------- 503
M G P+ EHYSCM+DL GRAG L +A I MP P +
Sbjct: 123 DSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGN 182
Query: 504 --IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
+A +A ++L P N YV+L+NIYAA+G+W++ +R++M+DR V+K+PG SWIE
Sbjct: 183 IELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIE 242
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHH 609
V+ ++H F+ D SHP I+EI+ LE ++ +MK AGY+P+ KE L HH
Sbjct: 243 VQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHH 302
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEKLA+AFG++ST G I V+KNLR+CGDCH A KFIS I REI +RDT+RFH FKDG
Sbjct: 303 SEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDG 362
Query: 670 RCSCGDYW 677
+CSCGDYW
Sbjct: 363 QCSCGDYW 370
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+A IL A S+ L G Q HA +IK GF + + +GL+D+Y KC G + D +VF ++
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKC-GRIEDAQEVFSKL 59
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-------- 345
+PD+ WN MISG +Q +A+ F+++ + G P+ +FV V+S CS
Sbjct: 60 LEPDVASWNAMISGLAQ-HGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEG 118
Query: 346 -NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSL 403
N S+ + H ++ K E S +V ++ + G L++A ++MP E N
Sbjct: 119 RNYFDSMTRD-HGISPKAEHYS-------CMVDLFGRAGCLDEALNFINQMPVEPNASVW 170
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
S++ HG A R E ++E P T+V + + A G+ + K MMKD
Sbjct: 171 GSLLGACRVHGNIELAERAVEQLIELT-PENPGTYVLLSNIYAAAGRWDDAGKVRKMMKD 229
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
KQ+H I GF+ SV+N L+ Y + G +++A+ VF ++ E D SWN+M+ Q
Sbjct: 18 KQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLE-PDVASWNAMISGLAQ 76
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSH 267
H G EA+ LF++M+ + + T +L+ + + G + + + G +
Sbjct: 77 HGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAE 136
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
S ++DL+ + +G + + + ++P +P+ +W +++
Sbjct: 137 HYSCMVDLFGR-AGCLDEALNFINQMPVEPNASVWGSLL 174
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 46/230 (20%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ C L GK +HA +K +SN + +Y KCG
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCG---------------- 47
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
RI A+++F ++ +PD+ S+N +IS A G + A+ LF+ M +
Sbjct: 48 ---------------RIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQ 92
Query: 125 KRFDTDGFTL---------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+ T +GL+ N + + H I +HY+ ++ +
Sbjct: 93 TGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDH--GISPKAEHYSC----MVDLFG 146
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LDEA +M + W S++ A H A + ++++ L
Sbjct: 147 RAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIEL 196
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 212/606 (34%), Positives = 317/606 (52%), Gaps = 66/606 (10%)
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
S L +A+ + L K+LH I G + + + N+LL Y + G + +A ++F + +
Sbjct: 9 SQLCSAARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPR-R 67
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL--VGGLQ 252
D V+W S++ A AL + + ++S D + AS++ A +L L G Q
Sbjct: 68 DPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQ 127
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKC------------------------------SGD 282
HA S F + + S LID+YAK SG
Sbjct: 128 VHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGR 187
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH-PDDCSFVCVI 341
+ ++F + P +L W +ISG Q D A F ++ G D V+
Sbjct: 188 KFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVD-AFHLFVEMRHEGISVTDPLVLSSVV 246
Query: 342 SACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
AC+NL+ LGKQ+H + I + S + ++NAL+ MY+KC +L A+ +F M +
Sbjct: 247 GACANLALWELGKQMHGVVITLGYESC-LFISNALIDMYAKCSDLVAAKYIFCEMCRKDV 305
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
VS S+I G AQHG EAL L++ M+ + P +TFV ++ AC+H G V++G+ F
Sbjct: 306 VSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRT 365
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------S 503
M + G P +HY+C++DL R+G L +AE LI MP NP
Sbjct: 366 MVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQ 425
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+A++ A+H L L+P + Y++L+NIYA +G WE+V+ +R+LM +K PG+S I++
Sbjct: 426 MAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLG 485
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSE 611
K HVF A + SHPM EI + E+ +M++ GY PD KE++L HSE
Sbjct: 486 KGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSE 545
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
+LAVA+GLL G I ++KNLR+CGDCH +K ISAI REI VRD R+H FKDG C
Sbjct: 546 RLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNC 605
Query: 672 SCGDYW 677
SC D+W
Sbjct: 606 SCNDFW 611
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 210/451 (46%), Gaps = 47/451 (10%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL AY + I A QLFD +P+ D V++ +L++A ALS+ + + F
Sbjct: 42 NTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFH 101
Query: 129 TDGFTLSGLITASSNNLCLI----KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
D F + L+ A +N L KQ+H F V +SL+ Y++ G D +
Sbjct: 102 PDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGR 161
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE---------------MVSLQLGL 229
VF + + + +SW +M+ Y + EA +LF++ +V G+
Sbjct: 162 AVFDSISSL-NSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGV 220
Query: 230 DMY-----------------TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
D + L+S++ A +L G Q H +I G+ I + L
Sbjct: 221 DAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNAL 280
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID+YAKCS D+ +F E+ + D+V W ++I G +Q + +++AL + ++ G P
Sbjct: 281 IDMYAKCS-DLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ-AEEALALYDEMVLAGVKP 338
Query: 333 DDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
++ +FV +I ACS+ S G+ + ++ S + L+ ++S+ G+L++A L
Sbjct: 339 NEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENL 398
Query: 392 FDRMPEH-NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTG 449
MP + + + ++++ +HG A+R+ + +L N+ P + + +LS A G
Sbjct: 399 IRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLL--NLKPEDPSSYILLSNIYAGAG 456
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+ K +M + + G YSC IDL
Sbjct: 457 MWEDVSKVRKLMMTLEAKKAPG--YSC-IDL 484
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSA--YLSNHFILLYSKCGCLSAAHHA 56
F ++K C +G + GK +HA + L PFS + + I +Y+K G
Sbjct: 106 VFASLVKACANLGVLHVKQGKQVHARFF--LSPFSDDDVVKSSLIDMYAKFGLPDYGRAV 163
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F+ N S+ +++ YAR R A +LF Q P +L ++ LIS G+ A
Sbjct: 164 FDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAF 223
Query: 117 SLFKDMREKRFD-TDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTC 173
LF +MR + TD LS ++ A +N L KQ+H + I G++ ++N+L+
Sbjct: 224 HLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDM 283
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ L AK +F EM KD VSW S++V QH + EAL L+ EMV + + T
Sbjct: 284 YAKCSDLVAAKYIFCEMCR-KDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVT 342
Query: 234 LASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
++ A S LV G F + G + + L+DL+++ SG + + +
Sbjct: 343 FVGLIHA-CSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSR-SGHLDEAENLIR 400
Query: 292 EIP-QPDLVLWNTMIS 306
+P PD W ++S
Sbjct: 401 TMPVNPDEPTWAALLS 416
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 240/812 (29%), Positives = 378/812 (46%), Gaps = 168/812 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ LKTC D+ G +H +K YL + Y +C L A+
Sbjct: 135 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN------ 188
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+F ++P P+ + +N I + + LF+
Sbjct: 189 -------------------------QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFR 223
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + T+ ++ A L KQ+H G D S+ N L++ YS+NG
Sbjct: 224 KMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNG 283
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT----- 233
L+ A+RVF M E ++ SWNSM+ +Y +A LF E+ S + D+ T
Sbjct: 284 KLELARRVFDSM-ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342
Query: 234 ------------------------------LASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ S+L A + L L G + H +++++GF
Sbjct: 343 SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFD 402
Query: 264 QNSHIGSGLIDLYAK------------------------------CSGDMRDCMKVFEEI 293
+ ++G+ LID+Y K G D +++ ++
Sbjct: 403 CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQM 462
Query: 294 PQ----PDLVLWNTMISGYSQ----KEEY------------------------SDQA--- 318
+ PDLV WN MISGY+ KE S QA
Sbjct: 463 EKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNN 522
Query: 319 ---LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
L F ++ + G P+ S C++ AC++LS GK+IH L+I+ + + V A
Sbjct: 523 RDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIED-VFVATA 581
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L+ MYSK +L++A ++F R+ S N MI G+A G+G EA+ +F M + + P
Sbjct: 582 LIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPD 641
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITF ++LSAC ++G + EG KYF M + P EHY CM+DLLGRAG L +A LI
Sbjct: 642 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 701
Query: 495 EAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
MP P + A AA + +LEP+N+ Y+++ N+Y+ +WE
Sbjct: 702 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 761
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
++ +R LM GV+ + +SWI++ +++HVF +++ HP +I+ L ++ +MK+ G
Sbjct: 762 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 821
Query: 598 YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YVPD K+K L+ H+EKLA+ +GL+ GEPI V+KN RIC DCH+A K
Sbjct: 822 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 881
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+IS + RE+ +RD RFH F++G+CSC D+W
Sbjct: 882 YISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE-ALQLFQEMVSLQL 227
+L++ Y G A VFY +G ++ + WNS V + L L++F+E+ +
Sbjct: 71 NLISSYLGFGDFWSAAMVFY-VGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 129
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D + L T + D+ G++ H LIK GF + ++ L++ Y +C G +
Sbjct: 130 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG-LEKAN 188
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF E+P P+ +LWN I Q E+ + + F+K+ + + V V+ AC +
Sbjct: 189 QVFHEMPNPEALLWNEAIILNLQSEKL-QKGVELFRKMQFSFLKAETATIVRVLQACGKM 247
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ KQIH + + S+ +S+ N L++MYSK G LE ARR+FD M NT S NSM
Sbjct: 248 GALNAAKQIHGYVFRFGLDSD-VSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 306
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ YA G +A LF + +++ P +T+ +LS G E M+ G
Sbjct: 307 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-G 365
Query: 467 FEPEGEHYSCMIDLLGRAGKLT 488
F+P + ++ + G L
Sbjct: 366 FKPNSSSMTSVLQAISELGFLN 387
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 203/454 (44%), Gaps = 43/454 (9%)
Query: 82 ASARQLFDQIPQPDLVSYNTLISAY-ADCGDTESALSLFKDMREKR--FDTDGFTLSGLI 138
++A + +P+ + + +N+ + + + G L +FK++ K FD++ ++++
Sbjct: 84 SAAMVFYVGLPR-NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKT 142
Query: 139 TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
++ L ++H I GFD + +L+ Y R L++A +VF+EM + +
Sbjct: 143 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN-PEALL 201
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WN ++ Q + + ++LF++M L + T+ +L A + L Q H ++
Sbjct: 202 WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF 261
Query: 259 KSGFHQNSHIGSGLIDLYAKCS------------------------------GDMRDCMK 288
+ G + + + LI +Y+K G + D
Sbjct: 262 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWS 321
Query: 289 VFEEIP----QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
+F E+ +PD+V WN ++SG+ Y ++ L +++ G+ P+ S V+ A
Sbjct: 322 LFYELESSDMKPDIVTWNCLLSGHFL-HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAI 380
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
S L ++GK+ H ++ + + V +L+ MY K +L A+ +FD M N +
Sbjct: 381 SELGFLNMGKETHGYVLRNGFDCD-VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAW 439
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
NS+++GY+ G+ +ALRL M + I P +T+ ++S A G E K
Sbjct: 440 NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKS 499
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G P ++ +I +AG D+ + M
Sbjct: 500 L-GLTPNVVSWTALISGSSQAGNNRDSLKFFAQM 532
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 149/371 (40%), Gaps = 33/371 (8%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS-GLIDLYAKCSGDMRDCMKVFEEI 293
++++T+ TS++ HA +IK N + LI Y GD VF
Sbjct: 40 SNVITSLTSVK------MMHAQMIKLPQKWNPDAAAKNLISSYLGF-GDFWSAAMVFYVG 92
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLG 352
+ + WN+ + + L FK+L+ G D + + C+ + LG
Sbjct: 93 LPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLG 152
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+IH IK + + + AL+ Y +C LE A ++F MP + N I Q
Sbjct: 153 MEIHGCLIKRGFDLD-VYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 211
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+ + LF M + + T V VL AC G + ++ + FG + +
Sbjct: 212 SEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFR-FGLDSDVS 270
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----IALKAANHFL--------QLEPSN 519
+ +I + + GKL A R+ ++M S I+ AA FL +LE S+
Sbjct: 271 LCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD 330
Query: 520 AVPYVMLANIYAAS----GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
P ++ N + G EEV I + M+ G KP S + Q ++E G
Sbjct: 331 MKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF--KPNSSSMTSVLQA---ISELGF 385
Query: 576 HPMIKEIHNYL 586
M KE H Y+
Sbjct: 386 LNMGKETHGYV 396
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 234/696 (33%), Positives = 353/696 (50%), Gaps = 66/696 (9%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
K +L K + +++ +S +F G A F++ NV S+N L++ Y +
Sbjct: 38 KFFDSLQFKAIGSWNSIVSGYF-----SNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI 138
I AR +F+ +P+ ++VS+ ++ Y G A SLF M E+ + GLI
Sbjct: 93 RMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLI 152
Query: 139 TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
++ + K + D AS N ++ R G +DEA+ +F EM E ++ V+
Sbjct: 153 ----DDGRIDKARKLYDMMPVKDVVASTN--MIGGLCREGRVDEARLIFDEMRE-RNVVT 205
Query: 199 WNSMVVAYGQHREGLEALQLFQEM-----VSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
W +M+ Y Q+ A +LF+ M VS L YTL+ + F
Sbjct: 206 WTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF--------F 257
Query: 254 HAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
+K N+ I G G + G++ +VF+ + D W MI Y +K
Sbjct: 258 EVMPMKPVIACNAMIVGFGEV-------GEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISV 371
+ +AL F ++ + G P S + ++S C+ L S G+Q+HA ++ + + + V
Sbjct: 311 -FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD-VYV 368
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+ L+ MY KCG L A+ +FDR + + NS+I+GYA HG+G EAL++F M +
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P +T +++L+AC++ GK+ EG + F M+ F P EHYSC +D+LGRAG++ A
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 492 RLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASG 534
LIE+M P + +A AA + EP NA YV+L++I A+
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRS 548
Query: 535 KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GSHPMIKEIHNYLEEMSRKM 593
KW +VA +R+ MR V K PG SWIEV K++H+F +HP I LE+ +
Sbjct: 549 KWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLL 608
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
++AGY PD K L HSE+LAVA+GLL G PI VMKNLR+CGDCH
Sbjct: 609 REAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
AIK IS + REI +RD RFH F +G CSC DYW
Sbjct: 669 AAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 63/325 (19%)
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
SR G ++EA++ F++ + K SWNS+V Y + EA QLF EM +
Sbjct: 28 SRIGKINEARK-FFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV------- 79
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S LV SG+ +N I + VFE +P
Sbjct: 80 -------VSWNGLV-----------SGYIKNRMI---------------VEARNVFELMP 106
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
+ ++V W M+ GY Q E +A F ++ P+ + + +
Sbjct: 107 ERNVVSWTAMVKGYMQ-EGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDK 159
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
L + ++ S N ++ + G +++AR +FD M E N V+ +MI GY Q+
Sbjct: 160 ARKLYDMMPVKDVVASTN--MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN 217
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
A +LFE M E T +++ S+L +G++ + +++F +M P
Sbjct: 218 RVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVI 266
Query: 475 SC--MIDLLGRAGKLTDAERLIEAM 497
+C MI G G+++ A R+ + M
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLM 291
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C L G+ +HA ++ Y+++ + +Y KCG L A F++ +
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFK 120
+ +N +++ YA A ++F ++P P+ V+ +++A + G E L +F+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 121 DMREK 125
M K
Sbjct: 457 SMESK 461
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 303/543 (55%), Gaps = 36/543 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-- 225
N+L+ R+ + R ++ +D SW+++V A+ +H + AL +++ M+
Sbjct: 96 NTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPG 155
Query: 226 QLGLD-MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
G+D +T +S L A T+ G + H H+++ G ++ + S L D+YAKC G +
Sbjct: 156 SAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKC-GRVD 214
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
D VF+ +P D+V W M+ Y + F ++ R G P++ ++ V+ AC
Sbjct: 215 DARSVFDRMPVRDVVSWTAMVERYFDARR-DGEGFRLFVRMLRSGIQPNEFTYAGVLRAC 273
Query: 345 SNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ S LGKQ+H K + +ALV MYSK G++ A R+F MP+ + VS
Sbjct: 274 AEFTSEKLGKQVHGRMTKSRA-GDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSW 332
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+MI+GYAQ+G EALR F+ +L + P ++TFV VLSACAH G V +G F +KD
Sbjct: 333 TAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKD 392
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
+G E +HY+C+IDLL R+G AE +I M P +A
Sbjct: 393 EYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLAR 452
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA ++EP N YV LANIYA+ G ++EV RR+M +G+ K P SWIEV +M
Sbjct: 453 WAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRM 512
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
HVF+ D HP ++++ L+++ KM++ GYV D K++ + +HSE+LA
Sbjct: 513 HVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLA 572
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
VAFG+++T G PI V KNLRICGDCH IK IS I REI VRD+ RFH FK+G CSC
Sbjct: 573 VAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCR 632
Query: 675 DYW 677
DYW
Sbjct: 633 DYW 635
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 14/261 (5%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H + A+ ++ L YA+ R+ AR +FD++P D+VS+ ++ Y D
Sbjct: 187 HVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGE 246
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
LF M + FT +G++ A + + L KQ+H ++L+
Sbjct: 247 GFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVH 306
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G + A RVF M ++ D VSW +M+ Y Q+ + EAL+ F ++ D
Sbjct: 307 MYSKYGDMGTAVRVFRGMPKL-DLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHV 365
Query: 233 TLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKC-----SGDMRDC 286
T +L+A + GL FH+ + G + + +IDL ++ + +M +
Sbjct: 366 TFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINT 425
Query: 287 MKVFEEIPQPDLVLWNTMISG 307
M V +P+ LW +++ G
Sbjct: 426 MSV-----KPNKFLWASLLGG 441
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C GK +H K+ S + + + +YSK G + A F
Sbjct: 265 TYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGM 324
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
++ S+ +++ YA+ + A + FD + +PD V++ ++SA A G + L
Sbjct: 325 PKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGL 384
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
S+F ++++ I DHYA V + L SR
Sbjct: 385 SIFHSIKDE----------------------------YGIEHTADHYACVIDLL----SR 412
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+G + A+ + M ++ W S++
Sbjct: 413 SGLFERAEEMINTMSVKPNKFLWASLL 439
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 304/541 (56%), Gaps = 77/541 (14%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+++T Y++ L+ A+R F M E + VSWN+M+ Y Q+ EAL+LF EM+
Sbjct: 109 TAMVTGYAKVKDLEAARRYFDCMPE-RSVVSWNAMLSGYAQNGLAEEALRLFDEML---- 163
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
G ++NS + +I Y + GD+
Sbjct: 164 ---------------------------------GAYRNSVTWNAMISAYMRV-GDLDSAR 189
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSN 346
K+F +P ++V WN+MI+GY+Q + S A+ FK++ PD+ + V VISAC +
Sbjct: 190 KLFNTMPGRNVVTWNSMIAGYAQNGQ-SAMAIELFKEMITAKKLTPDEVTMVSVISACGH 248
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L LG + + +I+ + IS +NA++ MYS+CG++EDA+R+F M + VS N+
Sbjct: 249 LGALELGNWVVRFLTENQIKLS-ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 307
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
+I+G+A HG G+EA+ L M E I P +TF+ VL+AC+H G + EG+K F +KD
Sbjct: 308 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-- 365
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GS------------IALKA 508
P +HY+CM+DLLGR G+L DA+R +E MP P GS + A
Sbjct: 366 ---PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELA 422
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
AN +LEP N+ +++L+NIYA++G+W++V IR M+ GV+K G+SW+E ++H
Sbjct: 423 ANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHK 482
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------HSEKLAVA 616
F+ D SH +I+ L E+ +KM++AGY+ DK L HSEKLA+
Sbjct: 483 FIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAIC 542
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
+ LL + G I V+KNLR+C DCH AIK IS + GR I VRD RFHCF DG CSC DY
Sbjct: 543 YALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDY 602
Query: 677 W 677
W
Sbjct: 603 W 603
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 142/281 (50%), Gaps = 32/281 (11%)
Query: 27 KNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA--NVFSFNVLLAAYARQLRIASA 84
+++V ++A LS Y++ G A F++ A N ++N +++AY R + SA
Sbjct: 134 RSVVSWNAMLSG-----YAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSA 188
Query: 85 RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLITASSN 143
R+LF+ +P ++V++N++I+ YA G + A+ LFK+M K+ D T+ +I+A
Sbjct: 189 RKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG- 247
Query: 144 NLCLIKQLHCLAIYCGFDHYA---SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+L ++ + + + + S +N+++ YSR G +++AKRVF EM +D VS+N
Sbjct: 248 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA-TRDVVSYN 306
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+++ + H G+EA+ L M + D T +LTA + HA L++
Sbjct: 307 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS-----------HAGLLEE 355
Query: 261 GFHQNSHIGSGLIDLYAKC-------SGDMRDCMKVFEEIP 294
G I ID YA C G++ D + E +P
Sbjct: 356 GRKVFESIKDPAIDHYA-CMVDLLGRVGELEDAKRTMERMP 395
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L G + +N + S N I +YS+CG + A F +
Sbjct: 238 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 297
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N L++ +A A L + +PD V++ +++A + G E
Sbjct: 298 ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 357
Query: 117 SLFKDMREKRFD 128
+F+ +++ D
Sbjct: 358 KVFESIKDPAID 369
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 222/732 (30%), Positives = 368/732 (50%), Gaps = 106/732 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +V K C ++ GK ++ L ++ + + ++ KCG + A F +
Sbjct: 192 VFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESA- 115
+ +VF +N++++ Y + A + + +PD V++N +IS YA G E A
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS 311
Query: 116 -----------------------------------LSLFKDMREKRFDTDGFTLSGLITA 140
LS+F+ M + + T++ ++A
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371
Query: 141 SSNNLCLIKQLHCLAIYCG---------------FDHYASVN------------------ 167
+N L L++ + YC D+YA
Sbjct: 372 CTN-LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 430
Query: 168 --NSLLTCYSRNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
N++L Y+ G +EA + EM G D ++WN +V + Q+ +G AL+ FQ M
Sbjct: 431 SWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
S+ + + T++ L A + +L G + H +++++ ++ +GS LI +Y+ C
Sbjct: 491 HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
C VF E+ D+V+WN++IS +Q S AL +++N + + V +
Sbjct: 551 EVAC-SVFSELSTRDVVVWNSIISACAQSGR-SVNALDLLREMNLSNVEVNTVTMVSALP 608
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
ACS L+ GK+IH I+ + + + N+L+ MY +CG+++ +RR+FD MP+ + V
Sbjct: 609 ACSKLAALRQGKEIHQFIIRCGLDTCNF-ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 667
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S N MI+ Y HG GM+A+ LF+ + P +ITF ++LSAC+H+G + EG KYF MM
Sbjct: 668 SWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------I 504
K + +P E Y+CM+DLL RAG+ + IE MPF P + +
Sbjct: 728 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 787
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AA + +LEP ++ YV++ANIY+A+G+WE+ A IR LM++RGV K PG SWIEVK+
Sbjct: 788 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSY 624
++H FV D SHP++++I + K +KE L HSEK+A+AFGL+ST+
Sbjct: 848 KLHSFVVGDTSHPLMEQIS------GKDGKLDVDEDEKEFSLCGHSEKIALAFGLISTTX 901
Query: 625 GEPILVMKNLRI 636
G P+ ++KNLR+
Sbjct: 902 GTPLRIIKNLRV 913
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/605 (23%), Positives = 245/605 (40%), Gaps = 142/605 (23%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+ C +L G +HA + N V +L + + +Y + GC
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC------------ 139
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ AR++FD++ + ++ S+ ++ Y GD E + LF
Sbjct: 140 -------------------VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D F + A S N + K ++ + GF+ + V S+L + + G
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 180 LDEAKRVFYEM------------------GEIK----------------DEVSWNSMVVA 205
+D A+R F E+ GE K D+V+WN+++
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 206 YGQHREGLEALQLFQEMVSL------------------QLGLDM---------------- 231
Y Q + EA + F EM L Q G D
Sbjct: 301 YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360
Query: 232 --YTLASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
T+AS ++A T+L L G + H + IK + +G+ L+D YAKC + +
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR-SVEVARR 419
Query: 289 VFEEIPQPDLVLWNTMISGYSQK--------------------------------EEYSD 316
F I Q DLV WN M++GY+ + +Y D
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479
Query: 317 --QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNN 373
AL F++++ +G P+ + ++AC + + LGK+IH ++ I + V +
Sbjct: 480 GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS-TGVGS 538
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL++MYS C +LE A +F + + V NS+I+ AQ G + AL L M +N+
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+T VS L AC+ + +G++ + G + + +ID+ GR G + + R+
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 494 IEAMP 498
+ MP
Sbjct: 658 FDLMP 662
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
ASIL L +L G Q HA L+ +G +GS L+++Y + +G + D ++F+++
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ-TGCVEDARRMFDKMS 151
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ ++ W ++ Y +Y ++ + F + G PD F V ACS L +GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDY-EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
++ + I N V +++ M+ KCG ++ ARR F+ + + N M++GY
Sbjct: 211 DVYDYMLSIGFEGNS-CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G +AL+ M + + P +T+ +++S A +G+ E KYF M + F+P
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVS 329
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPF---NPGSIALKAA 509
++ +I + G +A + M P SI + +A
Sbjct: 330 WTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASA 368
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 221/664 (33%), Positives = 342/664 (51%), Gaps = 74/664 (11%)
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT--DGFTLSGLIT- 139
+A ++FD P L ++ ++IS A G + F +M ++ T + F L+G++
Sbjct: 76 NAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRC 135
Query: 140 -ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE------ 192
A ++ +++H + G + N++L Y++ G A+R F M +
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195
Query: 193 ------------------------IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
++D SWN++V +H EAL Q+MV +
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255
Query: 229 LDMYTLASI--LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
YT + + L S DL G Q H ++ + +++ +G L+D+Y KC G+M
Sbjct: 256 FSNYTYSMVFALAGLLSSRDL--GRQLHGRVVVAVLEEDAFVGCSLMDMYCKC-GEMESA 312
Query: 287 MKVFE---EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ +F+ + + W+TM++GY Q ++AL F+++ R G V SA
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQNGR-EEEALEFFRRMLREGVPAGQFILTSVASA 371
Query: 344 CSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C+N G+Q+H K+ R + + +A+V MYSK G+LEDA R+F N
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFD-APLASAIVDMYSKSGSLEDACRIFRSAQTKNVAL 430
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
+M+ YA HG G AL +F M I P IT V+VLSAC+H+G V++G YF++M+
Sbjct: 431 WTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQ 490
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK--------------- 507
+ +G P EHY+CM+DL GRAG L A+ IE + ++ K
Sbjct: 491 EEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYA 550
Query: 508 --AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
A+ +QLE +A YV+++N+YA + KW + +R M++R V+K+PG SWI +K
Sbjct: 551 QLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNV 610
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKL 613
+H FVA D SHP EI+ YLE++ ++K+ GY +E L HSEKL
Sbjct: 611 VHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKL 670
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+AFG++ST G + + KNLR+C DCH AIKFI+ REI VRD YRFH FKDG+CSC
Sbjct: 671 AIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSC 730
Query: 674 GDYW 677
D+W
Sbjct: 731 EDFW 734
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 46/356 (12%)
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSL--QLGLDMYTL 234
L A RVF + + +W S++ G+H +G+ A F EM+ + + L
Sbjct: 74 LHNAHRVF-DGTPTRSLPAWTSIISGCAREGRHADGMRA---FAEMLDECGATAPNAFVL 129
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS-------------- 280
A +L L D+ G + H +++SG + + + ++D+YAKC
Sbjct: 130 AGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQ 189
Query: 281 ----------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
GD+ ++F+E D+ WNT++SG + ++ +ALG ++
Sbjct: 190 KDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGL-MRHGHTTEALGRLQQ 248
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ R G + ++ V + LS LG+Q+H + + + V +L+ MY KCG
Sbjct: 249 MVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVV-VAVLEEDAFVGCSLMDMYCKCG 307
Query: 384 NLEDARRLFDR---MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
+E A +FDR E + ++M+AGY Q+G EAL F ML +P S
Sbjct: 308 EMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTS 367
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
V SACA+ G V +G++ ++ + G + S ++D+ ++G L DA R+ +
Sbjct: 368 VASACANAGMVEQGRQVHGFVEKL-GHRFDAPLASAIVDMYSKSGSLEDACRIFRS 422
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET--NIPPTNITFVSV 441
L +A R+FD P + + S+I+G A+ G + +R F ML+ P V
Sbjct: 73 GLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGV 132
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
L CA G V G++ + G P+ + ++D+ + G A R AM
Sbjct: 133 LRCCAGLGDVESGRRIHGWILRS-GVCPDVVLCNAVLDMYAKCGDHGRARRAFGAM 187
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 221/636 (34%), Positives = 327/636 (51%), Gaps = 106/636 (16%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDH----YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
++ L I Q+H L I D A + L C S N L A+ VF E+ D
Sbjct: 12 NATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLL-YARSVFDEIPS-PDT 69
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHA 255
WN+M+ AY + E++ LF +M + + +D Y+L+ ++ A L+D G + H
Sbjct: 70 FIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHT 129
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCS------------------------------GDMRD 285
++K G + + + LI++YAK G++
Sbjct: 130 QVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINL 189
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQ------------------------------KEEYS 315
+F+ +P+ DLV WNTMI G++ K S
Sbjct: 190 AHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQS 249
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN-- 372
++AL F ++ PD + V V+SAC ++ +GK IH I NRI ++
Sbjct: 250 NEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHEC-----IERNRIEIDLK 304
Query: 373 --NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+LV MY+KCG+++++ R+F+ M + + ++MI G A HG G AL F M+ +
Sbjct: 305 LGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISED 364
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P ++TF+ VLSAC+H G V EG YF+ M ++ P+ EHY C++D+LGRAG+L +A
Sbjct: 365 IKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEA 424
Query: 491 ERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAAS 533
LI++MPF P + IA +A + L+LEP YV+L+NIY+ +
Sbjct: 425 MELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQA 484
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
+W++V +RR+M++ +QK PG S IEV +H FVA D SHP K+I L E++ ++
Sbjct: 485 KEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARL 544
Query: 594 KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
K GY P +KE L HHSEKLA+AFGLLST+ G I ++KNLR+C DCH
Sbjct: 545 KANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCH 604
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
AIK IS R I VRD RFH F +G CSC DYW
Sbjct: 605 IAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 147/345 (42%), Gaps = 74/345 (21%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCMKVFEEI 293
S+L T L ++ Q HA +IK+ N+ + + L+ CS D+ VF+EI
Sbjct: 8 SLLQNATKLNQII---QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEI 64
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
P PD +WNTMI Y + + F+ ++ D S VI AC L P G
Sbjct: 65 PSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNG 124
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR---------------------- 390
+++H +KI + S+ + V AL+ MY+K G++E AR
Sbjct: 125 QKLHTQVLKIGLGSD-LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR 183
Query: 391 ---------LFDRMPEHNTVSLNSMIAGYAQHG-IGM----------------------- 417
LFDRMPE + VS N+MI G+A G +G
Sbjct: 184 VGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAY 243
Query: 418 -------EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
EALRLF M N+ P +T VSVLSAC G + G+ + + E +
Sbjct: 244 AKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI-ERNRIEID 302
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP----FNPGSIALKAANH 511
+ + ++D+ + G + ++ R+ M F ++ + ANH
Sbjct: 303 LKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANH 347
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 154/339 (45%), Gaps = 39/339 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
V++ C +D G+ LH LK + ++ I +Y+K G + A + ++ H +
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNT----------------------- 101
+ +NVLLA Y R I A LFD++P+ DLVS+NT
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230
Query: 102 --------LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQL 151
+I+AYA + AL LF +M+ D T+ +++A + L + K +
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMI 290
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
H + + SL+ Y++ G +D + RVF M +D +W++M++ H
Sbjct: 291 HECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNN-RDVFAWSAMIMGLANHGF 349
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK--SGFHQNSHIG 269
G AL F +M+S + + T +L+A + + + G + + K + H G
Sbjct: 350 GELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYG 409
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
++D+ + +G +++ M++ + +P PD ++W ++
Sbjct: 410 C-VVDILGR-AGRLQEAMELIKSMPFAPDAIVWRALLGA 446
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L GK +H +N + L + +Y+KCG + + FN
Sbjct: 270 TMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGM 329
Query: 61 QHANVFSFNVLLAAYAR----QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+ +VF+++ ++ A +L + ++ + +P+ V++ ++SA + G +
Sbjct: 330 NNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGW 389
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ F M K +D + +HY V + L R
Sbjct: 390 TYFTSM-SKVYD---------------------------VSPKIEHYGCVVDIL----GR 417
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G L EA + M D + W +++ A
Sbjct: 418 AGRLQEAMELIKSMPFAPDAIVWRALLGA 446
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 219/591 (37%), Positives = 320/591 (54%), Gaps = 65/591 (10%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K++H + G + + N+LL Y + L +A +F EM + +D VSW S++ AY Q
Sbjct: 22 KKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQ-RDHVSWASILTAYNQ 80
Query: 209 HREGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ + L +F M + +L D + A++L A SL L G Q HA + S F +
Sbjct: 81 AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV 140
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ---KEE----------- 313
+ S L+D+YAKC G VF+ I V W M+SGY++ K+E
Sbjct: 141 VKSSLVDMYAKC-GLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVR 199
Query: 314 --YSDQAL------------GC--FKKLNRVGYH-PDDCSFVCVISACSNLSP-SLGKQI 355
YS AL GC F ++ R G D V+ AC+NL+ LGKQI
Sbjct: 200 NLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQI 259
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H L I S + ++NALV MY+KC ++ AR +F+RM + VS S+I G AQHG
Sbjct: 260 HGLVIGSGYESC-LFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGR 318
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EAL L++ M+ I P +TFV ++ AC+H G V++G+K F M + + P + ++
Sbjct: 319 AKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFT 378
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPS 518
C +DLL R+G L +AE LI+ MP P + ++ A+ L L
Sbjct: 379 CFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMH 438
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
YV+L+N+YA +GKWE+++ +R+LM D V++KPG+S I++ K+ VF A + HPM
Sbjct: 439 EPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPM 498
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
EI L+E+ +M++ GY+PD KE+ L HSE+ AVA+GLL G
Sbjct: 499 KDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGT 558
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRICGDCH +K S+I +EI VRD R+H FKDGRCSC D+W
Sbjct: 559 VIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 219/498 (43%), Gaps = 76/498 (15%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
LK C + + K +HA +K+ + L N + Y KC L AH+
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHY---------- 58
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-RE 124
LFD++PQ D VS+ ++++AY LS+F M
Sbjct: 59 ---------------------LFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTT 97
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
R D F + L+ A ++ +L L KQ+H + F V +SL+ Y++ G
Sbjct: 98 DRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSI 157
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLF-----------QEMVS--LQL 227
A+ VF + +K VSW +M+ Y R GL EA++LF ++S +Q
Sbjct: 158 ARSVFDSI-LVKTSVSWTAMLSGYA--RSGLKDEAMELFLRTPVRNLYSWTALISGLVQS 214
Query: 228 G-------------------LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
G +D L+S++ A +L L G Q H +I SG+ I
Sbjct: 215 GYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFI 274
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ L+D+YAKCS D+ VF + D+V W ++I G +Q + +AL + ++
Sbjct: 275 SNALVDMYAKCS-DILAARNVFNRMLHRDVVSWTSIIVGAAQHGR-AKEALDLYDQMVLA 332
Query: 329 GYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
P++ +FV +I ACS+ S G+++ I+ S + + + + S+ G+L +
Sbjct: 333 EIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNE 392
Query: 388 ARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
A L MP + + + ++++ HG +R+ + +L N+ + T+V + + A
Sbjct: 393 AEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPS-TYVLLSNVYA 451
Query: 447 HTGKVAEGQKYFSMMKDM 464
GK + + +M DM
Sbjct: 452 GAGKWEQMSRVRKLMTDM 469
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 11/314 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPF--SAYLSNHFILLYSKCGCLSAAHHAFN 58
+ +LK C L GK +HA ++ L PF + + + +Y+KCG S A F+
Sbjct: 106 VYATLLKACASLCSLRLGKQVHARFV--LSPFVDDDVVKSSLVDMYAKCGLPSIARSVFD 163
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
S+ +L+ YAR A +LF + P +L S+ LIS G +
Sbjct: 164 SILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYM 223
Query: 119 FKDMREKRFD-TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F +MR + D D LS ++ A +N L L KQ+H L I G++ ++N+L+ Y+
Sbjct: 224 FIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYA 283
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ + A+ VF M +D VSW S++V QH EAL L+ +MV ++ + T
Sbjct: 284 KCSDILAARNVFNRMLH-RDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFV 342
Query: 236 SILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++ A + + G + F A + + + + +DL ++ SG + + + + +P
Sbjct: 343 GLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSR-SGHLNEAEDLIKTMP 401
Query: 295 -QPDLVLWNTMISG 307
+PD W ++S
Sbjct: 402 HKPDEPTWAALLSA 415
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 190/477 (39%), Positives = 286/477 (59%), Gaps = 35/477 (7%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T ++L+ FT+ L G + H+ + +G + +G+ L+++Y KC + + FE+
Sbjct: 12 TYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS-VEEARAAFEK 70
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN--RVGYHPDDCSFVCVISACSNLSP- 349
I +P++V W+ M++ Y+Q ++ AL ++++ R G P+ +F+ ++ ACS L
Sbjct: 71 ISRPNVVSWSAMLAAYAQNG-HARMALELYREMGSARKGMAPNRVTFITLLDACSFLGAL 129
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+ G++IHA + ++ + V NALV Y +CG+L DA+ +FD M + +S +SMI+
Sbjct: 130 AEGRKIHAAVAERGFDTDLV-VCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISA 188
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+AQ G EA+ L+ ML P +I F+SVL AC+++G V +F + EP
Sbjct: 189 FAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEP 248
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHF 512
EHY+CM+D+LGRAGKL DAE L+ MPF+PG + AA
Sbjct: 249 TLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVV 308
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+L+P N+ PY+ LANIY+A+ + ++ A IR+LM +RG++KKPG SWIEV ++H F+A
Sbjct: 309 FELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAG 368
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLL 620
D HP EI+ ++ + R+MK+AGY D KE L +HSEKLA+AFGL+
Sbjct: 369 DKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLI 428
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G P+ ++KNLR+C DCH A K IS + GREI VRDT RFH F DG CSC DYW
Sbjct: 429 STPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 61/324 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL L G+ +H+ + + + +Y KC + A AF +
Sbjct: 12 TYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKI 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ------PDLVSYNTLISAYADCGDTES 114
NV S++ +LAAYA+ A +L+ ++ P+ V++ TL+ A + G
Sbjct: 72 SRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAE 131
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ + E+ FDTD + C N+L+ Y
Sbjct: 132 GRKIHAAVAERGFDTD------------------------LVVC---------NALVNFY 158
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
R G L +AK VF M +D +SW+SM+ A+ Q EA++L+ M+S D
Sbjct: 159 GRCGSLGDAKIVFDGMRR-RDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIF 217
Query: 235 ASILTAFTS----------LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
S+L A ++ +VG Q L H ++D+ + +G +R
Sbjct: 218 ISVLFACSNSGVVEASGDFFRSIVGDTQVEPTL--------EHYAC-MVDVLGR-AGKLR 267
Query: 285 DCMKVFEEIP-QPDLVLWNTMISG 307
D + +P P +L+ TM+S
Sbjct: 268 DAEDLLRLMPFHPGPLLYMTMLSA 291
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 186/465 (40%), Positives = 285/465 (61%), Gaps = 34/465 (7%)
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
+ D+ G H+ +I+SGF ++ + L+ LYA C GD+ KVF+++P+ DLV WN+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAWNS 59
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
+I+G+++ + ++AL + ++N G PD + V ++SAC+ + +LGK++H IK+
Sbjct: 60 VINGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ N + +N L+ +Y++CG +E+A+ LFD M + N+VS S+I G A +G G EA+ L
Sbjct: 119 GLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 423 FEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
F++M T + P ITFV +L AC+H G V EG +YF M++ + EP EH+ CM+DLL
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYV 524
RAG++ A I++MP P + + A LQLEP+++ YV
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+N+YA+ +W +V IR+ M GV+K PG S +EV ++H F+ D SHP I+
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 585 YLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
L+EM+ +++ GYVP +KE +V+HSEK+A+AF L+ST PI V+K
Sbjct: 358 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 417
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+C DCH AIK +S + REI VRD RFH FK+G CSC DYW
Sbjct: 418 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 148/286 (51%), Gaps = 34/286 (11%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
++ N LL YA +ASA ++FD++P+ DLV++N++I+ +A+ G E AL+L+ +M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
K DGFT+ L++A + L L K++H I G +N LL Y+R G ++E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM-YTLASILTAF 241
AK +F EM + K+ VSW S++V + G EA++LF+ M S + L T IL A
Sbjct: 143 AKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 201
Query: 242 TSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMRDCMK 288
+ H ++K GF + H G ++DL A+ +G ++ +
Sbjct: 202 S-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGC-MVDLLAR-AGQVKKAYE 248
Query: 289 VFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+ +P QP++V+W T++ + + D L F ++ + P+
Sbjct: 249 YIKSMPMQPNVVIWRTLLGACTV---HGDSDLAEFARIQILQLEPN 291
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ S NVLL YAR R+ A+ LFD++ + VS+ +LI A G + A+ LFK M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 124 EKRFDTDGF-----TLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS--------- 169
T+G T G++ A S HC + GF+++ +
Sbjct: 183 ----STEGLLPCEITFVGILYACS---------HCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 170 ---LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
++ +R G + +A M + V W +++ A H G L F + LQ
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQ 287
Query: 227 L 227
L
Sbjct: 288 L 288
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H +K + + + SN + LY++CG + A F++
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ-----PDLVSYNTLISAYADCGDTESA 115
N S+ L+ A A +LF + P +++ ++ A + CG +
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 116 LSLFKDMREK 125
F+ MRE+
Sbjct: 211 FEYFRRMREE 220
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 301/559 (53%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+QLH ++ V SLLT Y+R G L A+RVF EM VSW +++ AY
Sbjct: 138 EQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPH-PSTVSWTALITAYMD 196
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ + + + + D +T +LTA + DL G + G Q+ +
Sbjct: 197 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 256
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ +DLY KC G+M +VF+++ D V W M+ GY+ + +AL F +
Sbjct: 257 ATAAVDLYVKC-GEMAKAREVFDKMRDKDAVAWGAMVGGYASNG-HPREALDLFLAMQAE 314
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD + +SAC+ L LG+Q + E N + + AL+ MY+KCG+ +
Sbjct: 315 GVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTAE 373
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F +M + + + N+MI G G A L M ++ + + TF+ +L +C H
Sbjct: 374 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 433
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
TG + +G++YF M ++ P EHY C++DLL RAG L +A +LI+ MP ++ L
Sbjct: 434 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 493
Query: 508 A-------------ANHFL----QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
A A H L +LEP N+ YVML+NIY+ G+WE+ A +R M+++G
Sbjct: 494 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 553
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------- 600
V+K P SW+E + ++H F D SHP+ +I+ L+E+ +MK GY P
Sbjct: 554 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 613
Query: 601 --DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
+KE LVHHSEKLA+AF LL T GE I V KNLR+C DCH AIK IS I REI VR
Sbjct: 614 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 673
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFHCF+DG CSC DYW
Sbjct: 674 DNNRFHCFRDGSCSCNDYW 692
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 190/406 (46%), Gaps = 19/406 (4%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ--------TQHANVFSFNVLL 72
LHAL L L+P ++L+ F + L A Q H N LL
Sbjct: 103 LHALRLHCLLPNPSHLT--FPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLL 160
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
YAR + A+++FD++P P VS+ LI+AY D GD A+ + ++ D F
Sbjct: 161 TLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSF 220
Query: 133 TLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
T ++TA + +L + + A G V + + Y + G + +A+ VF +M
Sbjct: 221 TAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 280
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+ KD V+W +MV Y + EAL LF M + + D Y +A L+A T L L G
Sbjct: 281 RD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLG 339
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q + F N +G+ LID+YAKC G + VF+++ + D+++WN MI G
Sbjct: 340 RQAIRMVDWDEFLDNPVLGTALIDMYAKC-GSTAEAWVVFQQMRKKDIIVWNAMILGLGM 398
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNR 368
+ A ++ + G +D +F+ ++ +C++ L + H +T I S R
Sbjct: 399 T-GHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI-SPR 456
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
I +V + S+ G L++A +L D MP N V L +++ G H
Sbjct: 457 IEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIH 502
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 227/711 (31%), Positives = 365/711 (51%), Gaps = 71/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L+ C G + G+ +HA+ LK SNHF
Sbjct: 253 TFVSALQACEGPTFIKIGRGIHAVILK---------SNHF-------------------- 283
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V+ N L+A YA ++ A ++F + D VS+NTL+S A++ F+
Sbjct: 284 --TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQ 341
Query: 121 DMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
DM++ D ++ +I AS S NL ++H AI G D + NSL+ Y +
Sbjct: 342 DMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCC 401
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ F M E KD +SW +++ Y Q+ L+AL L +++ ++ +D + SIL
Sbjct: 402 CVKYMGSAFEYMPE-KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSIL 460
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK-VFEEIPQPD 297
A + L+ + H +++K G + I + ++++Y + + + D + VFE I D
Sbjct: 461 LACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELA--LVDYARHVFESINSKD 517
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+V W +MI+ + +AL F L PD + V V+ A + LS GK+IH
Sbjct: 518 IVSWTSMITCCVHNG-LAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIH 576
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
I+ + + N+LV MY++CG +E+AR +F+ + + + + SMI HG G
Sbjct: 577 GFLIRKGFFLEGL-IANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCG 635
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+A+ LF M + N+ P +ITF+++L AC+H+G V EG+++F +MK+ + EP EHY+C
Sbjct: 636 KDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYAC 695
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSN 519
++DLL R+ L +A + MP P + + AA LQL N
Sbjct: 696 LVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN 755
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ YV+++N +AA G+W +V +R +M+ ++KKPG SWIEV+ ++H F+A D SHP
Sbjct: 756 SGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQC 815
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKEKRLVH-------------HSEKLAVAFGLLSTSYGE 626
I+ L + ++ +K+ G + K + H HSE+LA+ +GLL TS G
Sbjct: 816 NNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGT 875
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ + KNLRIC DCH K S I+ R + VRD RFH F+ G CSCGD+W
Sbjct: 876 CLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 247/502 (49%), Gaps = 50/502 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C ++ G +H + +K ++ N I +Y+KCG
Sbjct: 150 TFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCG------------ 197
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQ--IPQPDLVSYNTLISAYADCGDTESALSL 118
+ AR LFD + + D VS+N++ISA+ G++ ALSL
Sbjct: 198 -------------------DLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSL 238
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS--VNNSLLTCYSR 176
F+ M+E +++ +T + A + A+ +H+ V+N+L+ Y+
Sbjct: 239 FRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYAN 298
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A+RVF M KD VSWN+++ Q+ +A+ FQ+M D ++ +
Sbjct: 299 CGQMEDAERVFKSM-LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLN 357
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK----VFEE 292
++ A +L+ G++ HA+ IK G N HIG+ LID+Y KC C+K FE
Sbjct: 358 MIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCC-----CVKYMGSAFEY 412
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSL 351
+P+ DL+ W T+I+GY+Q E + D AL +K+ D ++ ACS L S L
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLD-ALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKL 471
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
K+IH +K + I + NA+V +Y + ++ AR +F+ + + VS SMI
Sbjct: 472 IKEIHGYVLKGGLAD--ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCV 529
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G+ +EAL LF ++ETNI P IT VSVL A A + +G++ + GF EG
Sbjct: 530 HNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK-GFFLEG 588
Query: 472 EHYSCMIDLLGRAGKLTDAERL 493
+ ++D+ R G + +A +
Sbjct: 589 LIANSLVDMYARCGTMENARNI 610
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 234/477 (49%), Gaps = 50/477 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPF-SAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+ Q L+ C + L G+ LHA +LK S +L F+ +Y KCG
Sbjct: 49 YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCG------------ 96
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
SF A ++FD++ + + ++N +I A G A+ L+K
Sbjct: 97 ------SF-------------YDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYK 137
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR D FT ++ A L ++H +A+ CG+ + V N+L+ Y++ G
Sbjct: 138 EMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCG 197
Query: 179 FLDEAKRVFYEMG--EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
L A RV ++ G E D VSWNS++ A+ E LEAL LF+ M + + + YT S
Sbjct: 198 DLGGA-RVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVS 256
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L A + G HA ++KS + ++ + LI +YA C G M D +VF+ +
Sbjct: 257 ALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANC-GQMEDAERVFKSMLFK 315
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQ 354
D V WNT++SG Q + YSD A+ F+ + G PD S + +I+A S S +L G +
Sbjct: 316 DCVSWNTLLSGMVQNDMYSD-AINHFQDMQDSGQKPDQVSVLNMIAA-SGRSANLLAGME 373
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA IK I SN + + N+L+ MY KC ++ F+ MPE + +S ++IAGYAQ+
Sbjct: 374 VHAYAIKHGIDSN-MHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNE 432
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
++AL L + + + S+L AC+ G K ++K++ G+ +G
Sbjct: 433 CHLDALNLLRKVQLEKMDVDPMMIGSILLACS-------GLKSEKLIKEIHGYVLKG 482
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 342/625 (54%), Gaps = 60/625 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L TC DL G H++ +K + + ++ N + +Y+KCG L
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE--------- 480
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
ARQ+F+++ D V++NT+I +Y + A LFK
Sbjct: 481 ----------------------DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M +DG L+ + A ++ L KQ+HCL++ CG D +SL+ YS+ G
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A++VF + E VS N+++ Y Q+ EA+ LFQEM++ + T A+I+
Sbjct: 579 IIKDARKVFSSLPEWS-VVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIV 636
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH-QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP- 296
A E L G QFH + K GF + ++G L+ +Y G M + +F E+ P
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG-MTEACALFSELSSPK 695
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+VLW M+SG+SQ Y ++AL +K++ G PD +FV V+ CS LS G+ I
Sbjct: 696 SIVLWTGMMSGHSQNGFY-EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH-NTVSLNSMIAGYAQHG 414
H+L + + ++ +N L+ MY+KCG+++ + ++FD M N VS NS+I GYA++G
Sbjct: 755 HSLIFHLAHDLDELT-SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+AL++F+ M +++I P ITF+ VL+AC+H GKV++G+K F MM +G E +H
Sbjct: 814 YAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNP---------GSIALK--------AANHFLQLEP 517
+CM+DLLGR G L +A+ IEA P G+ + +A ++LEP
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEP 933
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
N+ YV+L+NIYA+ G WE+ +R++MRDRGV+K PG+SWI+V+++ H+F A D SH
Sbjct: 934 QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993
Query: 578 MIKEIHNYLEEMSRKMKQAGYV-PD 601
I +I +LE++ MK V PD
Sbjct: 994 EIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 171/590 (28%), Positives = 288/590 (48%), Gaps = 62/590 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL TC ++ G+ +H +K + ++Y + +Y+KC +S A F
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 61 QHANV-----------------------------------FSFNVLLAAYARQLRIASAR 85
N +F ++ Y R ++ AR
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 86 QLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--N 143
LF ++ PD+V++N +IS + G A+ F +MR+ + TL +++A
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
NL L +H AI G V +SL++ YS+ ++ A +VF E E K++V WN+M+
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF-EALEEKNDVFWNAMI 400
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
Y + E + ++LF +M S +D +T S+L+ + DL G QFH+ +IK
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
+N +G+ L+D+YAKC G + D ++FE + D V WNT+I Y Q E S +A FK
Sbjct: 461 KNLFVGNALVDMYAKC-GALEDARQIFERMCDRDNVTWNTIIGSYVQDENES-EAFDLFK 518
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
++N G D + AC+++ GKQ+H L++K + + + ++L+ MYSKC
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD-LHTGSSLIDMYSKC 577
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G ++DAR++F +PE + VS+N++IAGY+Q+ + EA+ LF+ ML + P+ ITF +++
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIV 636
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
AC + G ++ + GF EGE+ I LLG M N
Sbjct: 637 EACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--ISLLG--------------MYMNSR 679
Query: 503 SIALKAANHFLQL-EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGV 551
+ +A F +L P + V + + + ++ +G +EE + MR GV
Sbjct: 680 GMT-EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 249/489 (50%), Gaps = 26/489 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N++ + L++ Y++ ++ +A ++F+ + + + V +N +I YA G++ + LF DM
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 123 REKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ ++ D FT + L++ A+S++L + Q H + I V N+L+ Y++ G L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
++A+++F M + +D V+WN+++ +Y Q EA LF+ M + D LAS L A
Sbjct: 480 EDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
T + L G Q H +K G ++ H GS LID+Y+KC G ++D KVF +P+ +V
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC-GIIKDARKVFSSLPEWSVVS 597
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
N +I+GYSQ ++A+ F+++ G +P + +F ++ AC S +LG Q H
Sbjct: 598 MNALIAGYSQNN--LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGME 418
K S + +L+ MY + +A LF + ++ L M++G++Q+G E
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL+ ++ M + P TFV+VL C+ + EG+ S++ + + + + +I
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL-AHDLDELTSNTLI 774
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
D+ + G + + ++ + M SN V + L N YA +G E+
Sbjct: 775 DMYAKCGDMKGSSQVFDEMR-----------------RRSNVVSWNSLINGYAKNGYAED 817
Query: 539 VATIRRLMR 547
I MR
Sbjct: 818 ALKIFDSMR 826
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 238/554 (42%), Gaps = 108/554 (19%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH------------ 62
L GK++H+ L + L N + LY+KC +S A F+ +
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMY 135
Query: 63 ----------------------ANVFSFNVLLAAYARQLRIASARQL------------- 87
N F+F+++L+ AR+ + RQ+
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 88 ----------------------FDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
F+ I P+ V + L S Y G E A+ +F+ MR++
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 126 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
DH A V +++ Y R G L +A+
Sbjct: 256 GHRP-------------------------------DHLAFV--TVINTYIRLGKLKDARL 282
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F EM D V+WN M+ +G+ A++ F M + TL S+L+A +
Sbjct: 283 LFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+L GL HA IK G N ++GS L+ +Y+KC M KVFE + + + V WN MI
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE-KMEAAAKVFEALEEKNDVFWNAMI 400
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTIKIEI 364
GY+ E S + + F + GY+ DD +F ++S C ++ +G Q H++ IK ++
Sbjct: 401 RGYAHNGE-SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
N + V NALV MY+KCG LEDAR++F+RM + + V+ N++I Y Q EA LF+
Sbjct: 460 AKN-LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M I S L AC H + +G++ + G + + S +ID+ +
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHTGSSLIDMYSKC 577
Query: 485 GKLTDAERLIEAMP 498
G + DA ++ ++P
Sbjct: 578 GIIKDARKVFSSLP 591
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 226/720 (31%), Positives = 373/720 (51%), Gaps = 55/720 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYL-----KNLVPFSAYLSNHFILLYSKCGCLSAA-- 53
++ V+ CV G++L AL L P ++Y S + + ++ G LS
Sbjct: 234 SWNSVVSGCVQ-----NGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRE 288
Query: 54 -HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
H A + N LL YA+ R+ SA ++F QI + D +S+N+++S Y
Sbjct: 289 LHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFY 348
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSL 170
A+ F +M + F D + L +A + L ++ H AI V N+L
Sbjct: 349 AEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTL 408
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y + G ++ + +VF MG I+D +SW +++ + Q EAL++ E+ + +D
Sbjct: 409 MDMYIKCGSIECSAKVFESMG-IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVD 467
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ SIL L+ + Q H + I++G + + + LID+Y +C G+ + +F
Sbjct: 468 SMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGEC-GEFDHSLNLF 525
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ + + D+V W +MI+ + + A+ F ++ + PD + V ++ A + LS
Sbjct: 526 QRVEKKDIVSWTSMINCCTNNGRL-NGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSL 584
Query: 350 SLGKQIHALTIKIEIRSNRIS--VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+ GKQ+H I+ R+ I V ++LV MYS CG++ A R+F+R + V +MI
Sbjct: 585 TKGKQVHGFLIR---RNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMI 641
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
HG G +A+ LF+ ML+T + P +++F+++L AC+H+ V EG+ Y +M +
Sbjct: 642 NATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRL 701
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAAN 510
+P EHY+C++D+LGR+G+ +A I+ MP +P S +A+ AAN
Sbjct: 702 KPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAAN 761
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
L+LEP N Y++++N++A GKW R M +RG++K P SWIE+ +H F
Sbjct: 762 KLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFT 821
Query: 571 AEDGSHPMIKEIHNYLEEMSRKM-KQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ D H + IH L E++ + ++ GYV D K L HSE++A+AF
Sbjct: 822 SGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAF 881
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ST G PI + KNLR+CGDCH K +S + R+I VRD RFH F G CSC D+W
Sbjct: 882 GLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 234/498 (46%), Gaps = 39/498 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C D G +H L +K + S ++N I +Y+KCG L +A F
Sbjct: 166 TLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWL 225
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q AR D+ S+N+++S G T AL+LF+
Sbjct: 226 QQ--------------------DAR---------DVASWNSVVSGCVQNGRTLEALALFR 256
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ F + +T + + A L L ++LH + CG + N+LL Y++ G
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYG 315
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A RVF ++ E KD +SWNSM+ Y Q+ EA+ F EM+ D + S+
Sbjct: 316 RVDSALRVFGQIAE-KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A L L G +FHA+ IK H + +G+ L+D+Y KC G + KVFE + D
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKC-GSIECSAKVFESMGIRDH 433
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
+ W T+++ ++Q +S +AL +L + G D ++ C L S SL KQ+H
Sbjct: 434 ISWTTILACFAQSSRHS-EALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHC 492
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
I+ + + + N L+ +Y +CG + + LF R+ + + VS SMI +G
Sbjct: 493 YAIRNGLLD--LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLN 550
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
A+ LF M + NI P ++ VS+L A A + +G++ + F EG S +
Sbjct: 551 GAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRR-NFPIEGPVVSSL 609
Query: 478 IDLLGRAGKLTDAERLIE 495
+D+ G + A R+ E
Sbjct: 610 VDMYSGCGSMNYAIRVFE 627
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 207/402 (51%), Gaps = 20/402 (4%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-- 128
L+ Y R R+ AR+LF+ +P + S+N L+ AY G A+ ++ MR
Sbjct: 101 LVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGS 160
Query: 129 -TDGFTLSGLITA---SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
DG TL+ ++ A + C ++H LA+ G D V N+L+ Y++ G LD A
Sbjct: 161 APDGCTLASVLKACGAEGDGRC-GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSAL 219
Query: 185 RVF-YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
RVF + + +D SWNS+V Q+ LEAL LF+ M S ++ YT ++L
Sbjct: 220 RVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAE 279
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L L G + HA L+K G N + L+ +YAK G + ++VF +I + D + WN+
Sbjct: 280 LGLLSLGRELHAALLKCGSELNIQCNALLV-MYAK-YGRVDSALRVFGQIAEKDYISWNS 337
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
M+S Y Q Y+ +A+ F ++ + G+ PD V + SA +LS + G++ HA IK
Sbjct: 338 MLSCYVQNSFYA-EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQ 396
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ ++ + V N L+ MY KCG++E + ++F+ M + +S +++A +AQ EAL +
Sbjct: 397 RLHTD-LQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEM 455
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+ + I ++ S+L C G K S++K +
Sbjct: 456 ILELQKEGIMVDSMMIGSILETCC-------GLKSISLLKQV 490
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 352 GKQIHA--LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G+Q+HA +T + + LV MY +CG ++DARRLF+ MP S N+++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 410 YAQHGIGMEALRLFEWMLETNIP---PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
Y G EA+R++ M + P P T SVL AC G G + + + G
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKV-G 194
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA 505
+ + +I + + G L A R+ E + + +A
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVA 233
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/509 (39%), Positives = 285/509 (55%), Gaps = 64/509 (12%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D +T + +L A L D+V G H K GF N + + +++LY C G+M D M +
Sbjct: 9 DTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLC-GEMGDAMLL 67
Query: 290 FEEIPQPDLVLWN-------------------------------TMISGYSQKEEYSDQA 318
FE++PQ D V WN +MISG+ Q + ++A
Sbjct: 68 FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGK-PNEA 126
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
+ F KL P++ + V V++AC++L LG+ +H + K + N + V N L+
Sbjct: 127 IDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRN-VHVCNTLID 185
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY KCG LE+ARR+F M E VS ++MIAG A HG EAL LF M++ + P +T
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F+ +L AC+H G + EG+++F+ M +G P+ EHY C++DL RAG L +A I +M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 498 PFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
P P + A +A H +L+P N YV+++NIYA + +WE+ A
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 541 TIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
+R+LM+DRGV+K G+S I V +H FVA D +HP ++I +++ KMK+ GY P
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAP 425
Query: 601 ------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+KEK L HSEKLAV FGL++T G PI +MKNLR+C DCH A+K IS
Sbjct: 426 KTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIIS 485
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I REI VRD RFHCF+DG+CSC D+W
Sbjct: 486 GIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 159/308 (51%), Gaps = 8/308 (2%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VLK C+ D+V GK++H L+ K + +L N + LY CG + A F + +
Sbjct: 16 VLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRD 75
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
++N+++A A++ I A F ++P ++ S+ ++IS + CG A+ LF + +
Sbjct: 76 AVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLED 135
Query: 125 KRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ + T+ ++ A ++ +L L + +H + GF V N+L+ Y + G L+
Sbjct: 136 EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLEN 195
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+RVFYEM E + VSW++M+ H + EAL LF EM+ L + + T +L A +
Sbjct: 196 ARRVFYEMEE-RTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACS 254
Query: 243 SLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLV 299
+ + G +F A + Q H G ++DL+++ +G + + + +P +P+ V
Sbjct: 255 HMGLIDEGRRFFASMTADYGVIPQIEHYGC-VVDLFSR-AGLLEEAHEFILSMPIKPNGV 312
Query: 300 LWNTMISG 307
+W ++ G
Sbjct: 313 VWGALLGG 320
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 45/238 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C DL G+ +H K+ + ++ N I +Y KCGCL
Sbjct: 144 TVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLE--------- 194
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+AR++F ++ + +VS++ +I+ A G E AL LF
Sbjct: 195 ----------------------NARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA-------IYCGFDHYASVNNSLLTC 173
+M + +G T GL+ A S+ + + A + +HY V +
Sbjct: 233 EMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCV----VDL 288
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE---GLEALQLFQEMVSLQLG 228
+SR G L+EA M + V W +++ H+ EA++ E+ L G
Sbjct: 289 FSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDG 346
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 315/573 (54%), Gaps = 84/573 (14%)
Query: 180 LDEAKRVFYEMGEIKDEVS------------WNSMVVAYGQHREGL--EALQLFQEMVSL 225
LD+ +R + +G + V+ W +++ +G GL +AL + +M++
Sbjct: 12 LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAII--HGHALRGLHEQALNFYAQMLTQ 69
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + +T +SIL L + G H+ +K GF + ++ +GL+D+YA+ GD+
Sbjct: 70 GVEPNAFTFSSIL----KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYAR-GGDVVS 124
Query: 286 CMKVFEEIPQPDLV-------------------------------LWNTMISGYSQKEEY 314
++F+ +P+ LV WN MI GY+Q
Sbjct: 125 AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNG-M 183
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
++AL F+++ + P++ + + V+SAC L G+ +H+ I+ N + V
Sbjct: 184 PNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN-VHVGT 242
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV MYSKCG+LEDAR +FD++ + + V+ NSMI GYA G EAL+LF+ M + P
Sbjct: 243 ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHP 302
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
TNITF+ +LSAC H+G V EG F+ MKD +G EP+ EHY CM++LLGRAG + A L
Sbjct: 303 TNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYEL 362
Query: 494 IEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKW 536
++ M P G IAL K + +N+ Y++L+NIYAA G W
Sbjct: 363 VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNW 422
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
+ VA +R +M+D GV+K+PG S IEV ++H F+A +HP KEI+ LEE++ +K
Sbjct: 423 DGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSH 482
Query: 597 GYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY P +KE+ L HSEKLA+AFGL++T G I ++KNLR+C DCH
Sbjct: 483 GYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVT 542
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K IS I GR+I VRD RFH F +G CSCGDYW
Sbjct: 543 KLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 144/310 (46%), Gaps = 10/310 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + GK+LH+ +K Y+ + +Y++ G + +A F+
Sbjct: 77 TFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S +L YA+ + +AR LFD + + D V +N +I Y G AL LF+
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + + T+ +++A L + +H G V +L+ YS+ G
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L++A+ VF ++ + KD V+WNSM+V Y EALQLF+ M + L T IL
Sbjct: 253 SLEDARLVFDKIDD-KDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGIL 311
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + G F+ + G +++L + +G + ++ + + +P
Sbjct: 312 SACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR-AGHVEQAYELVKNMNIEP 370
Query: 297 DLVLWNTMIS 306
D VLW T++
Sbjct: 371 DPVLWGTLLG 380
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/563 (37%), Positives = 316/563 (56%), Gaps = 36/563 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK--DEVSWNSMVVA 205
+KQL AI SV + S N + + +I D V +N+M
Sbjct: 36 LKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARG 95
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + L A LF +++ L D YT S+L A S + L G Q H IK G +N
Sbjct: 96 YARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSEN 155
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
++ LI++Y C+ +M +VF++I +P +V +N MI+GY++ ++AL F++L
Sbjct: 156 VYVCPTLINMYTACN-EMDCARRVFDKIWEPCVVTYNAMITGYARGSR-PNEALSLFREL 213
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
P D + + V+S+C+ L LGK +H +K + + V+ AL+ MY+KCG+
Sbjct: 214 QARNLKPTDVTMLSVLSSCALLGALDLGKWMHEY-VKKNGFNRFVKVDTALIDMYAKCGS 272
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L+DA +F+ M +T + ++MI YA HG G++A+ LF+ M + P ITF+ +L A
Sbjct: 273 LDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYA 332
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP--- 501
C+HTG V EG +YF M+D +G P +HY CM+DLLGRAG+L +A I +P P
Sbjct: 333 CSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPI 392
Query: 502 ------------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
G++ L + +L+ S+ Y++L+N+ A +G+WE+V +R+LM
Sbjct: 393 LWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMN 452
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------- 600
+RGV K PG S +EV +H F + DG H + ++H L+E+ +++K GYVP
Sbjct: 453 ERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFH 512
Query: 601 ------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
+KE L +HSEKLA+ FGLL+T G I V+KNLR+CGDCH+A K IS I R+
Sbjct: 513 ADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQ 572
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I +RD RFH FKDG+CSC DYW
Sbjct: 573 IILRDVQRFHHFKDGKCSCEDYW 595
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 37/311 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ LH L +K + + Y+ I +Y+ C
Sbjct: 123 TFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACN------------ 170
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ AR++FD+I +P +V+YN +I+ YA ALSLF+
Sbjct: 171 -------------------EMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+++ + T+ ++++ + L L K +H GF+ + V+ +L+ Y++ G
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A VF M ++D +W++M++AY H GL+A+ LF+EM D T +L
Sbjct: 272 SLDDAVCVFENMA-VRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLL 330
Query: 239 TAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + + G + F+ K G ++DL + +G + + + +P +P
Sbjct: 331 YACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGR-AGRLEEAYEFIVGLPIRP 389
Query: 297 DLVLWNTMISG 307
+LW T++S
Sbjct: 390 TPILWRTLLSA 400
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 79/216 (36%), Gaps = 42/216 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL +C L GK +H KN + I +Y+KCG L
Sbjct: 224 TMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLD--------- 274
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A +F+ + D +++ +I AYA G A+SLFK
Sbjct: 275 ----------------------DAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFK 312
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
+MR+ + D T GL+ A S+ + + + G HY + + L
Sbjct: 313 EMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLL--- 369
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
R G L+EA + + W +++ A G H
Sbjct: 370 -GRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSH 404
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 301/559 (53%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+QLH ++ V SLLT Y+R G L A+RVF EM VSW +++ AY
Sbjct: 91 EQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPH-PSTVSWTALITAYMD 149
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ + + + + D +T +LTA + DL G + G Q+ +
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 209
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ +DLY KC G+M +VF+++ D V W M+ GY+ + +AL F +
Sbjct: 210 ATAAVDLYVKC-GEMAKAREVFDKMRDKDAVAWGAMVGGYASNG-HPREALDLFLAMQAE 267
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD + +SAC+ L LG+Q + E N + + AL+ MY+KCG+ +
Sbjct: 268 GVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTAE 326
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F +M + + + N+MI G G A L M ++ + + TF+ +L +C H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 386
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
TG + +G++YF M ++ P EHY C++DLL RAG L +A +LI+ MP ++ L
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 446
Query: 508 A-------------ANHFL----QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
A A H L +LEP N+ YVML+NIY+ G+WE+ A +R M+++G
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 506
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------- 600
V+K P SW+E + ++H F D SHP+ +I+ L+E+ +MK GY P
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566
Query: 601 --DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
+KE LVHHSEKLA+AF LL T GE I V KNLR+C DCH AIK IS I REI VR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 626
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFHCF+DG CSC DYW
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 190/406 (46%), Gaps = 19/406 (4%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ--------TQHANVFSFNVLL 72
LHAL L L+P ++L+ F + L A Q H N LL
Sbjct: 56 LHALRLHCLLPNPSHLT--FPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLL 113
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
YAR + A+++FD++P P VS+ LI+AY D GD A+ + ++ D F
Sbjct: 114 TLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSF 173
Query: 133 TLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
T ++TA + +L + + A G V + + Y + G + +A+ VF +M
Sbjct: 174 TAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+ KD V+W +MV Y + EAL LF M + + D Y +A L+A T L L G
Sbjct: 234 RD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLG 292
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
Q + F N +G+ LID+YAKC G + VF+++ + D+++WN MI G
Sbjct: 293 RQAIRMVDWDEFLDNPVLGTALIDMYAKC-GSTAEAWVVFQQMRKKDIIVWNAMILGLGM 351
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHALTIKIEIRSNR 368
+ A ++ + G +D +F+ ++ +C++ L + H +T I S R
Sbjct: 352 T-GHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI-SPR 409
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
I +V + S+ G L++A +L D MP N V L +++ G H
Sbjct: 410 IEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIH 455
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 359/639 (56%), Gaps = 74/639 (11%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ 150
IP P LVS L +++ ++++L D R+ + TLS LI S L KQ
Sbjct: 3 IPNPCLVS---LPRSHSLPTPNPNSITLNND----RYFANHPTLS-LIDQCSETKQL-KQ 53
Query: 151 LHCLAIYCG--FDHYASVNNSLLTCYSRNGF--LDEAKRVFYEMGEIKDEVSWNSMVVAY 206
+H + G FD +++ + L+T + + F LD A++VF ++ + +WN+++ AY
Sbjct: 54 IHAQMLRTGLFFDPFSA--SRLITAAALSPFPSLDYAQQVFDQIPH-PNLYTWNTLIRAY 110
Query: 207 GQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
++L +F M+ D +T ++ A + LE+L G FH +IK +
Sbjct: 111 ASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSD 170
Query: 266 SHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
I + LI YAKC G++ +VF P+ D+V WN+MI+ + Q ++AL F+++
Sbjct: 171 VFILNSLIHFYAKC-GELGLGYRVFVNXPRRDVVSWNSMITAFVQGG-CPEEALELFQEM 228
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI----SVNNALVAMYS 380
P+ + V V+SAC+ S G+ +H+ I NRI +++NA++ MY+
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSY-----IERNRIXESLTLSNAMLDMYT 283
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ------------HGIGMEALRLFEWMLE 428
KCG++EDA+RLFD+MPE + VS +M+ GYA+ HG G +A+ LF M E
Sbjct: 284 KCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQE 343
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ P +TF ++L AC+H G V EG+ +F+ M+ ++G P +HY+CM+D+LGRAG L
Sbjct: 344 DKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLE 403
Query: 489 DAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYA 531
+A LIE MP P + +A +A + ++LEP N YV+L+NIYA
Sbjct: 404 EAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYA 463
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSR 591
+GKW+ V+ +R+LMRD G++K+PG S IEV +H F+ D SHP K+I+ L+E+
Sbjct: 464 KAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVA 523
Query: 592 KMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
+++ GYVP+ KE+ L HSEKLA+AFGL+ST +PI ++KNLR+CG
Sbjct: 524 RLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCG 583
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKD-GRCSCGDY 676
DCH+ K +S + REI +RD R D GR S D+
Sbjct: 584 DCHSVAKLVSKLYDREILLRD--RVWIVVDYGRISYEDF 620
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 21/343 (6%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-TDGFTLSGLITASS 142
A+Q+FDQIP P+L ++NTLI AYA + +L +F M + D D FT LI A+S
Sbjct: 88 AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147
Query: 143 --NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
L K H + I + NSL+ Y++ G L RVF +D VSWN
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPR-RDVVSWN 206
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
SM+ A+ Q EAL+LFQEM + + + T+ +L+A D G H+++ ++
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN 266
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS----- 315
++ + + ++D+Y KC G + D ++F+++P+ D+V W TM+ GY++ EY
Sbjct: 267 RIXESLTLSNAMLDMYTKC-GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGL 325
Query: 316 ------DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
A+ F K+ P+ +F ++ ACS++ L ++ ++E+ +
Sbjct: 326 AMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHV--GLVEEGRTFFNQMELVYGVL 383
Query: 370 SVNN---ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+V + + G LE+A L ++MP S+ + G
Sbjct: 384 PGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLG 426
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 149/321 (46%), Gaps = 49/321 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K +L TGK+ H + +K L+ ++ N I Y+KCG L +
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGY------ 191
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F P+ D+VS+N++I+A+ G E AL LF+
Sbjct: 192 -------------------------RVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQ 226
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + +G T+ G+++ A ++ + +H +++N++L Y++ G
Sbjct: 227 EMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCG 286
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ------------HREGLEALQLFQEMVSLQ 226
+++AKR+F +M E KD VSW +M+V Y + H G +A+ LF +M +
Sbjct: 287 SVEDAKRLFDKMPE-KDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDK 345
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHL-IKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ + T +IL A + + + G F + + G + ++D+ + +G + +
Sbjct: 346 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR-AGLLEE 404
Query: 286 CMKVFEEIPQ-PDLVLWNTMI 305
+++ E++P P +W ++
Sbjct: 405 AVELIEKMPMAPAASVWGALL 425
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 31/260 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C + D G+ +H+ +N + S LSN + +Y+KCG + A F++
Sbjct: 239 TMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKM 298
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+ +L YA+ +A+ L A G + A++LF
Sbjct: 299 PEKDIVSWTTMLVGYAKIGEYDAAQGL-------------------AMHGHGKDAIALFS 339
Query: 121 DMREKRFDTDGFTLSGLITASSN------NLCLIKQLHCL-AIYCGFDHYASVNNSLLTC 173
M+E + + T + ++ A S+ Q+ + + G HYA + + L
Sbjct: 340 KMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL--- 396
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMY 232
R G L+EA + +M W +++ A H + A Q +++ L+ G Y
Sbjct: 397 -GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 455
Query: 233 TLASILTAFTSLEDLVGGLQ 252
L S + A D V GL+
Sbjct: 456 VLLSNIYAKAGKWDRVSGLR 475
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 323/561 (57%), Gaps = 37/561 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+Q+H + G+ + L+ Y+R G L++A V M E ++ VSW +M+ Y Q
Sbjct: 55 RQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPE-RNVVSWTAMISGYSQ 113
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNS 266
+ EA LF M+ + +TLAS+LT+ T + + Q HA IK F +
Sbjct: 114 NERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHM 173
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+GS L+D+YA+ S ++++ +VF+ +P D+V + T++SGY+ + ++AL F++L
Sbjct: 174 FVGSSLLDMYAR-SENIQEARRVFDMLPARDVVSYTTILSGYT-RLGLDEEALNLFRQLY 231
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G + +F +++A S LS GKQ+H L ++ E+ +++ N+L+ MYSKCG L
Sbjct: 232 NEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRREL-PFFMALQNSLIDMYSKCGKL 290
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
+RR+FD MPE + VS N+M+ GY +HG+ E ++LF +M + + P ++T ++VL
Sbjct: 291 LYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KVKPDSVTLLAVLLGY 349
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---- 501
+H G V EG F + +HY C+IDLLGR+G+L A LI+ MPF P
Sbjct: 350 SHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAI 409
Query: 502 -----GSIALKA--------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
G+ + A A +EP NA YV+L+NIYAA+ W++V +R+LM
Sbjct: 410 WGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLK 469
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
+ V K+PG SW+ + K +H F + + HP ++I+ + E+ +K AG+VPD
Sbjct: 470 KTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHD 529
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KE+ L+ HSEKLA+ FGL+ST I VMKNLRIC DCHN KF+S + GREI+
Sbjct: 530 VDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREIS 589
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
+RD RFH +G C+CGDYW
Sbjct: 590 LRDKNRFHLITEGACTCGDYW 610
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 138/260 (53%), Gaps = 11/260 (4%)
Query: 55 HAF--NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
HAF + ++F + LL YAR I AR++FD +P D+VSY T++S Y G
Sbjct: 161 HAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLD 220
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSL 170
E AL+LF+ + + + T S L+ A S +++ KQ+H L + + ++ NSL
Sbjct: 221 EEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSL 280
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ YS+ G L ++RVF M E + VSWN+M++ YG+H E +QLF+ M ++ D
Sbjct: 281 IDMYSKCGKLLYSRRVFDNMPE-RSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KVKPD 338
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
TL ++L ++ + GL H++K S H G +IDL + SG + +
Sbjct: 339 SVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGC-VIDLLGR-SGQLEKALL 396
Query: 289 VFEEIP-QPDLVLWNTMISG 307
+ +++P QP +W +++
Sbjct: 397 LIQKMPFQPTRAIWGSLLGA 416
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L G + GK +H L L+ +PF L N I +YSKCG L + F+
Sbjct: 241 TFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNM 300
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +L Y R QLF D++ +PD V+ ++ Y+ G + L
Sbjct: 301 PERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKV-KPDSVTLLAVLLGYSHGGLVDEGL 359
Query: 117 SLF 119
+F
Sbjct: 360 DMF 362
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 234/735 (31%), Positives = 361/735 (49%), Gaps = 132/735 (17%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL +C G+S+HA K ++ N I LY +CG A F H +
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRD 208
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISA--------------- 105
+FN L++ +A+ A ++F+++ PD V+ ++L++A
Sbjct: 209 TVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 106 --------------------YADCGDTESAL----------------------------- 116
Y CGD E+AL
Sbjct: 269 YLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAK 328
Query: 117 --SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
LF M+ + FT ++ + + L +Q+H L++ GF+ V+ L+
Sbjct: 329 SFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G+L++A+RV EM + KD VSW SM+ Y QH +AL F+EM + D
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNI 447
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
LAS ++ ++ + GLQ HA + SG+ + I + L++LYA+C G +R+ FEE
Sbjct: 448 GLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARC-GRIREAFSSFEE 506
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
I D + WN ++SG++Q + ++AL F ++++ G + +FV +SA +NL+
Sbjct: 507 IEHKDEITWNGLVSGFAQSGLH-EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQ 565
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQIHA IK S V NAL+++Y KCG+ EDA+ F M E N VS N++I +
Sbjct: 566 GKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
QHG G+EAL F+ M + EG YF M D +G P
Sbjct: 625 QHGRGLEALDFFDQMKK------------------------EGLSYFKSMSDKYGIRPRP 660
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQ 514
+HY+C+ID+ GRAG+L A++ +E MP ++ + AA H L+
Sbjct: 661 DHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLE 720
Query: 515 LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDG 574
LEP ++ YV+L+N YA +GKW +R++MRDRGV+K+PG SWIEVK +H F D
Sbjct: 721 LEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 780
Query: 575 SHPMIKEIHNYLEEMSRKMKQAGYVP-------DKEKR------LVHHSEKLAVAFGLLS 621
HP+ ++I+N+L ++ ++ + GY DKE+ LV HSEKLAV FGL+S
Sbjct: 781 LHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV-HSEKLAVTFGLMS 839
Query: 622 TSYGEPILVMKNLRI 636
P+ V+KNLR+
Sbjct: 840 LPPCMPLRVIKNLRV 854
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 280/569 (49%), Gaps = 41/569 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N+L+ Y++ + AR++F+++ D VS+ ++S YA G E AL L++ M
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVV 140
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ LS ++++ + + +H GF V N+L+T Y R G A+RV
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERV 200
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
FY+M +D V++N+++ + Q G AL++F+EM S L D T++S+L A SL D
Sbjct: 201 FYDMPH-RDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGD 259
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H++L K+G + + L+DLY KC GD+ + +F + ++VLWN ++
Sbjct: 260 LQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKC-GDVETALVIFNLGNRTNVVLWNLILV 318
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
+ Q + + ++ F ++ G P+ ++ C++ C+ LG+QIH+L++K
Sbjct: 319 AFGQINDLA-KSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFE 377
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
S+ + V+ L+ MYSK G LE ARR+ + + E + VS SMIAGY QH +AL F+
Sbjct: 378 SD-MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKE 436
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M + I P NI S +S CA + +G + + + + G+ + ++ +++L R G
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVY-VSGYSGDVSIWNALVNLYARCG 495
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ + A + F ++E + + + L + +A SG EE +
Sbjct: 496 RIRE------------------AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMR 537
Query: 546 MRDRGVQ-----------KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
M GV+ + I+ KQ+H V + G H E+ N L + K
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGK-- 594
Query: 595 QAGYVPDKEKRLVHHSEKLAVAFGLLSTS 623
G D + SE+ V++ + TS
Sbjct: 595 -CGSFEDAKMEFSEMSERNEVSWNTIITS 622
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 194/391 (49%), Gaps = 9/391 (2%)
Query: 111 DTESALSLFKDMREKRFDTDGFTLSGLITASSNN---LCLIKQLHCLAIYCGFDHYASVN 167
D LSLF D + + + A N ++ ++H AI G V
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVG 80
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ YS+NG + A+RVF E+ +D VSW +M+ Y Q+ G EAL L+++M +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGV 139
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
Y L+S+L++ T E G HA K GF + +G+ LI LY +C G R
Sbjct: 140 VPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRC-GSFRLAE 198
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++P D V +NT+ISG++Q + + AL F+++ G PD + +++AC++L
Sbjct: 199 RVFYDMPHRDTVTFNTLISGHAQC-AHGEHALEIFEEMQSSGLSPDCVTISSLLAACASL 257
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
G Q+H+ K + S+ I + +L+ +Y KCG++E A +F+ N V N +
Sbjct: 258 GDLQKGTQLHSYLFKAGMSSDYI-MEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLI 316
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ + Q ++ LF M I P T+ +L C TG++ G++ S+ G
Sbjct: 317 LVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKT-G 375
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
FE + +ID+ + G L A R++E +
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 321/559 (57%), Gaps = 40/559 (7%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
A S NL +++H F A ++NSL+ Y + G + EA +VF +M KD VSW
Sbjct: 62 AQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRN-KDMVSW 120
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
S++ Y Q+ EA+ L M+ + + +T AS+L A + D G Q HA +K
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVK 180
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+H++ ++GS L+D+YA+C G M VF+++ + V WN +ISG+++K + + AL
Sbjct: 181 CDWHEDVYVGSALLDMYARC-GKMDMATAVFDKLDSKNGVSWNALISGFARKGD-GETAL 238
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ R G+ ++ + SA + + GK +HA IK + V N ++ M
Sbjct: 239 MVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAF-VGNTMLDM 297
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+K G++ DAR++F+R+ + V+ NSM+ +AQ+G+G EA+ FE M ++ I I+F
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISF 357
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +L+AC+H G V EG+ YF M+K+ + EPE EHY ++DLLGRAG L A I MP
Sbjct: 358 LCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416
Query: 499 FNP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P + AA+H QL+P ++ P V+L NIYA++G W+ A
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAAR 476
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD 601
+R++M+ GV+K+P SW+E++ +H+FVA D +HP +EI+ +E+S K+++ GYVPD
Sbjct: 477 VRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536
Query: 602 ------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+E L +HSEK+A+AF L+ G I +MKN+RICGDCH+A K+IS
Sbjct: 537 MDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISK 596
Query: 650 IAGREITVRDTYRFHCFKD 668
+ REI + H KD
Sbjct: 597 VFEREIVI-----IHLHKD 610
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 34/273 (12%)
Query: 13 RDLVTGKSLHALYLKNLVPFSA-----------YLSNHFILL--------YSKCGCLSAA 53
+D+V+ SL A Y +N +P A + N F Y+ G
Sbjct: 115 KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQI 174
Query: 54 HH-AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
H A H +V+ + LL YAR ++ A +FD++ + VS+N LIS +A GD
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
E+AL +F +M+ F+ FT S + +A + L K +H I A V N++
Sbjct: 235 ETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTM 294
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L Y+++G + +A++VF + KD V+WNSM+ A+ Q+ G EA+ F+EM + L+
Sbjct: 295 LDMYAKSGSMIDARKVFERVLN-KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ ILTA + H L+K G H
Sbjct: 354 QISFLCILTACS-----------HGGLVKEGKH 375
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H Q F N +L YA+ + AR++F+++ DLV++N++++A+A G +
Sbjct: 278 HMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKE 337
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGF------DHYASVNN 168
A+S F++MR+ + + ++TA S+ + + H + + +HY +V +
Sbjct: 338 AVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVD 397
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
L R G L+ A ++M W +++ A H+
Sbjct: 398 LL----GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK 435
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 315/532 (59%), Gaps = 37/532 (6%)
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ-HREGLEALQLFQEMVSLQLGL-DMYTLA 235
G ++ A+ VF ++ + SWNS++ Y Q H E + LF+++ + + +TLA
Sbjct: 38 GNINYARSVFAQIPH-PNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLA 96
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+L A + GLQ H+H++K GF + + + L++ Y KC ++ KVFEE+P
Sbjct: 97 FVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCE-EIGFARKVFEEMPV 155
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
+LV W MISG+++ D+A+ F+++ + G PD + V V+SAC+ +G
Sbjct: 156 RNLVAWTAMISGHARVGAV-DEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYW 214
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA K + ++ + ++ ALV MY+KCG +E A+++F MP +T + +SMI G+A HG
Sbjct: 215 LHAYIEKYFVLTD-LELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHG 273
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ +A+ F+ MLET + P ++TF++VLSACAH G V+ G++++S+M + FG EP EHY
Sbjct: 274 LAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEPSVEHY 332
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEP 517
C +DLL R+G + +A R+ M P + ++ A + L+LEP
Sbjct: 333 GCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEP 392
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
NA Y+M++N+Y++ +WE+++ +R++M+++ ++ PG S IEV +H FV D SHP
Sbjct: 393 LNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHP 452
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
+K + ++EEMS +++ +GY P +KE L HSE+ A+A+GLL T
Sbjct: 453 EVKMLREFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAP 512
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V+KNLR+C DCH IK IS + REI VRD RFH F G CSC D+W
Sbjct: 513 IVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 137/318 (43%), Gaps = 42/318 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G +H+ LK+ S ++ + Y KC + A F +
Sbjct: 94 TLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEM 153
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ ++ +++ +AR + A +LF ++ QPD ++ +++SA A G +
Sbjct: 154 PVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGY 213
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
L + EK F LS +L+ Y++
Sbjct: 214 WLHAYI-EKYFVLTDLELS--------------------------------TALVDMYAK 240
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ AK+VF M +KD +W+SM++ + H +A+ FQ+M+ ++ D T +
Sbjct: 241 CGCIERAKQVFVHM-PVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLA 299
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE--EIP 294
+L+A + G +F + +++ G + +DL + SG + + ++ +IP
Sbjct: 300 VLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCR-SGLVEEAYRITTTMKIP 358
Query: 295 QPDLVLWNTMISGYSQKE 312
P+ W +++ G +K+
Sbjct: 359 -PNAATWRSLLMGCKKKK 375
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 353 KQIHA--LTIKIEIRSNRISVNNALV-AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+Q+HA LT + + S +++ + S GN+ AR +F ++P N S NS+I G
Sbjct: 5 RQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIKG 64
Query: 410 YAQ-HGIGMEALRLFEWMLETNIP-PTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFG 466
Y+Q H + E + LF+ + ET P P + T VL ACA EG Q + ++KD FG
Sbjct: 65 YSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFG 124
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVML 526
+ + +++ G+ ++ A ++ E MP N V + +
Sbjct: 125 SSLFVQ--TSLVNFYGKCEEIGFARKVFEEMPVR------------------NLVAWTAM 164
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQ 552
+ +A G +E + R M+ G+Q
Sbjct: 165 ISGHARVGAVDEAMELFREMQKAGIQ 190
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 322/585 (55%), Gaps = 43/585 (7%)
Query: 133 TLSGLITASSNNLCLIKQLHCLAIYCGFDH-------YASVNNSLLTCYSRNGFLDEAKR 185
T+ L+ + N L + Q+H + G + + S +++L + + FL
Sbjct: 19 TILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSH 78
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF-QEMVSLQLGLDMYTLASILTAFTSL 244
D +N+++ AY Q R+ LF + M+ + + +T +L +
Sbjct: 79 TTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGI 138
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEIPQPDLVLWN 302
L G H ++K GF ++ H+ + LI +Y C G+ KVF++ P+ D V W+
Sbjct: 139 GSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC-CLGEDGFEFAEKVFDDSPKMDTVTWS 197
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
MI+G+ + S +A+ F+++ +G PD+ + V V+SAC++L LGK + + K
Sbjct: 198 AMIAGFV-RLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEK 256
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
I + + + NAL+ M++KCGN++ A +LF +M VS S+IAG A HG G++A+
Sbjct: 257 KNIPKS-VELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVS 315
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
LF+ M+E I P ++ F+ VLSAC+H+G V +G+ YF M+ F P+ EHY CM+DLL
Sbjct: 316 LFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLL 375
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYV 524
R G + +A ++ MPF P I + + ++ EP + YV
Sbjct: 376 CRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYV 435
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+L+NIYA +WE+ +R +M RG++K PG + IEV +M+ FVA D SH KEI+
Sbjct: 436 LLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYE 495
Query: 585 YLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
++EM R++K+AGYVP DKE L HSEKLA+AF LL+T G I ++K
Sbjct: 496 MVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVK 555
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+C DCH+A KFIS + REI VRD RFH FK+G CSC D+W
Sbjct: 556 NLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 141/313 (45%), Gaps = 39/313 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C G L GK +H +K ++ N I +Y CL F
Sbjct: 127 TFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC---CLGEDGFEF--- 180
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++FD P+ D V+++ +I+ + G + A+ LF+
Sbjct: 181 -----------------------AEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFR 217
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ D T+ +++A ++ L L K + + N+L+ +++ G
Sbjct: 218 EMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCG 277
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A ++F +M + + VSW S++ H GL+A+ LF EMV + D +L
Sbjct: 278 NVDKAIKLFRQM-DSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVL 336
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+A S LV +++ ++ F + H G ++DL + G +++ + +++P
Sbjct: 337 SA-CSHSGLVDKGRYYFGSMERNFSIVPKVEHYGC-MVDLLCR-GGFVKEAFEFVQKMPF 393
Query: 295 QPDLVLWNTMISG 307
+P+ ++W T+I+
Sbjct: 394 EPNQIIWRTIITA 406
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 215/658 (32%), Positives = 350/658 (53%), Gaps = 39/658 (5%)
Query: 54 HHAFNQTQH-ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
H A ++ H A+V+ N L+A YA+ R+ A ++F+ + D VS+NTL+S
Sbjct: 271 HGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY 330
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITAS--SNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
AL+ F+DM+ D ++ LI AS S NL K++H AI G D + N+L
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTL 390
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y++ + F M E KD +SW +++ Y Q+ LEA+ LF+++ + +D
Sbjct: 391 VDMYAKCCCVKYMGHAFECMHE-KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVD 449
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ S+L A + L+ + H ++ K + + + ++++Y + G + + F
Sbjct: 450 PMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEV-GHIDYARRAF 507
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
E I D+V W +MI+ +AL F L + PD + + +SA +NLS
Sbjct: 508 ESIRSKDIVSWTSMITCCVHNG-LPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
GK+IH I+ + ++LV MY+ CG +E++R++F + + + + SMI
Sbjct: 567 KKGKEIHGFLIRKGFFLEG-PIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINA 625
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
HG G +A+ LF+ M + N+ P +ITF+++L AC+H+G + EG+++F +MK + EP
Sbjct: 626 NGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEP 685
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHF 512
EHY+CM+DLL R+ L +A + MP P S + AA
Sbjct: 686 WPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKEL 745
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
LQ + N+ Y +++NI+AA G+W +V +R M+ G++K PG SWIEV ++H F+A
Sbjct: 746 LQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMAR 805
Query: 573 DGSHPMIKEIHNYLEEMSRKM-KQAGYVP------------DKEKRLVHHSEKLAVAFGL 619
D SHP +I+ L + ++ + K+ GY+ +K + L HSE+LA+ +GL
Sbjct: 806 DKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGL 865
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L T G I + KNLRIC DCH K S ++ R + VRD RFH F+ G CSCGD+W
Sbjct: 866 LVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 152/504 (30%), Positives = 247/504 (49%), Gaps = 56/504 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L CV + L G+ LHAL LK+ SA+L+ +L+Y KCG L
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLR------------- 96
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
A ++FD++ + + S+N L+ A+ G A+ L+KDMR
Sbjct: 97 ------------------DAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRV 138
Query: 125 KRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D T ++ A L ++H +A+ CG+ + V N+L+ Y + G L
Sbjct: 139 LGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGG 198
Query: 183 AKRVFYE--MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A RV ++ M E +D VSWNS++ A+ LEAL LF+ M + + + YT + L
Sbjct: 199 A-RVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQG 257
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ G+ H ++KS + ++ + LI +YAKC G M D +VFE + D V
Sbjct: 258 VEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKC-GRMEDAGRVFESMLCRDYVS 316
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIHAL 358
WNT++SG Q E YSD AL F+ + G PD S + +I+A S S +L GK++HA
Sbjct: 317 WNTLLSGLVQNELYSD-ALNYFRDMQNSGQKPDQVSVLNLIAA-SGRSGNLLKGKEVHAY 374
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ + SN + + N LV MY+KC ++ F+ M E + +S ++IAGYAQ+ +E
Sbjct: 375 AIRNGLDSN-MQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLE 433
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM- 477
A+ LF + + + SVL AC+ G K + ++++ G+ + + M
Sbjct: 434 AINLFRKVQVKGMDVDPMMIGSVLRACS-------GLKSRNFIREIHGYVFKRDLADIML 486
Query: 478 ----IDLLGRAGKLTDAERLIEAM 497
+++ G G + A R E++
Sbjct: 487 QNAIVNVYGEVGHIDYARRAFESI 510
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 248/506 (49%), Gaps = 50/506 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C + G +H + +K ++ N I +Y KCG
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCG------------ 194
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI--PQPDLVSYNTLISAYADCGDTESALSL 118
+ AR LFD I + D VS+N++ISA+ G+ ALSL
Sbjct: 195 -------------------DLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSL 235
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS--VNNSLLTCYSR 176
F+ M+E ++ +T + + + + +H+A V N+L+ Y++
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAK 295
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A RVF M +D VSWN+++ Q+ +AL F++M + D ++ +
Sbjct: 296 CGRMEDAGRVFESM-LCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLN 354
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK----VFEE 292
++ A +L+ G + HA+ I++G N IG+ L+D+YAKC C+K FE
Sbjct: 355 LIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCC-----CVKYMGHAFEC 409
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSL 351
+ + DL+ W T+I+GY+Q E+ +A+ F+K+ G D V+ ACS L S +
Sbjct: 410 MHEKDLISWTTIIAGYAQN-EFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
++IH K ++ I + NA+V +Y + G+++ ARR F+ + + VS SMI
Sbjct: 469 IREIHGYVFKRDLAD--IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCV 526
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G+ +EAL LF + +TNI P +I +S LSA A+ + +G++ + GF EG
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK-GFFLEG 585
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
S ++D+ G + ++ ++ ++
Sbjct: 586 PIASSLVDMYACCGTVENSRKMFHSV 611
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G+Q+HAL +K + + + LV MY KCG+L DA ++FD M E S N+++ +
Sbjct: 65 GQQLHALLLKSHLSA---FLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFV 121
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
G +EA+ L++ M + TF SVL AC G+ G + + G+
Sbjct: 122 SSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKC-GYGEFV 180
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYA 531
+ +I + G+ G L A L + + +E + V + + + +
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDG----------------IMMEKEDTVSWNSIISAHV 224
Query: 532 ASGKWEEVATIRRLMRDRGV 551
A G E ++ R M++ GV
Sbjct: 225 AEGNCLEALSLFRRMQEVGV 244
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 329/624 (52%), Gaps = 63/624 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G LH + + + + ++N + +YSKC CL A
Sbjct: 161 TFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQA-------- 212
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR+LFD PQ DLVS+N +IS Y G A LF+
Sbjct: 213 -----------------------ARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFR 249
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASV-----NNSLLTCYS 175
M D T + + + L+ HC I+ +A V ++L+ Y
Sbjct: 250 GMISAGIKPDSITFASFLPCVNE---LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ ++ A+++ + D V +M+ Y + + EAL+ F+ +V ++ T +
Sbjct: 307 KCRDVEMAQKILCQSSSF-DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SI AF L L G + H +IK+ + H+GS ++D+YAKC G + +VF I +
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKC-GRLDLACRVFNRITE 424
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GK 353
D + WN+MI+ SQ +A+ F+++ G D S +SAC+NL P+L GK
Sbjct: 425 KDAICWNSMITSCSQNGR-PGEAINLFRQMGMEGTRYDCVSISGALSACANL-PALHYGK 482
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IH L IK +RS+ + ++L+ MY+KCGNL +RR+FDRM E N VS NS+I+ Y H
Sbjct: 483 EIHGLMIKGPLRSD-LYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNH 541
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G E L LF ML I P ++TF+ ++SAC H G+V EG +Y+ +M + +G EH
Sbjct: 542 GDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEH 601
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLE 516
Y+C+ D+ GRAG+L +A I +MPF P G++ L A+ H L+
Sbjct: 602 YACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLD 661
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ YV+LAN+ A +GKW +V +R +M++RGV+K PG+SWIEV H+FVA DGSH
Sbjct: 662 PLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSH 721
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP 600
P+ +I++ L+ + ++K+ GYVP
Sbjct: 722 PLTAQIYSVLDSLLLELKKEGYVP 745
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 224/438 (51%), Gaps = 10/438 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF + L+ YA ++ A+ LFD IPQ D V +N +++ Y GD+ +A+ +F +MR
Sbjct: 92 DVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR 151
Query: 124 EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ T + +++ AS L L QLH +A+ CG + + V N+LL YS+ L
Sbjct: 152 HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQ 211
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+++F + D VSWN ++ Y Q+ EA LF+ M+S + D T AS L
Sbjct: 212 AARKLF-DTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L L + H ++I+ + + S LID+Y KC D+ K+ + D V+
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR-DVEMAQKILCQSSSFDTVVC 329
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
TMISGY + + +AL F+ L + P +F + A + L+ +LGK++H I
Sbjct: 330 TTMISGYVLNGK-NKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K ++ + V +A++ MY+KCG L+ A R+F+R+ E + + NSMI +Q+G EA+
Sbjct: 389 KTKL-DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM-KDMFGFEPEGEHYSCMID 479
LF M ++ LSACA+ + G++ +M K + E S +ID
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAE--SSLID 505
Query: 480 LLGRAGKLTDAERLIEAM 497
+ + G L + R+ + M
Sbjct: 506 MYAKCGNLNFSRRVFDRM 523
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 5/270 (1%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y R G L +AK +FY + ++ +WN M+ + + AL + +M+ + D YT
Sbjct: 2 YVRTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
++ A L+ + G H + G ++ +GS LI LYA+ +G + D +F+ I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE-NGHLSDAQYLFDNI 119
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLG 352
PQ D VLWN M++GY + + S A+ F ++ P+ +F CV+S C S LG
Sbjct: 120 PQKDSVLWNVMLNGYVKNGD-SGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
Q+H + + + + V N L+AMYSKC L+ AR+LFD P+ + VS N +I+GY Q
Sbjct: 179 TQLHGIAVSCGLELDS-PVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVL 442
+G+ EA LF M+ I P +ITF S L
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFL 267
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
+G ++D +F + WN MI G++ ++ + AL + K+ G PD +F
Sbjct: 5 TGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQF-NYALLFYLKMLGAGVSPDKYTFPY 63
Query: 340 VISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
V+ AC L S +GK +H T+ + + V ++L+ +Y++ G+L DA+ LFD +P+
Sbjct: 64 VVKACCGLKSVKMGKIVHE-TVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
++V N M+ GY ++G A+++F M + I P ++TF VLS CA + G +
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ G E + + ++ + + L A +L + P
Sbjct: 183 GIAVSC-GLELDSPVANTLLAMYSKCQCLQAARKLFDTSP 221
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY + G+L+DA+ LF + T + N MI G+ G AL + ML + P T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F V+ AC V G K ++ G + + S +I L G L+DA+ L + +
Sbjct: 61 FPYVVKACCGLKSVKMG-KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 498 P 498
P
Sbjct: 120 P 120
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 218/654 (33%), Positives = 356/654 (54%), Gaps = 65/654 (9%)
Query: 2 FRQVLKTCVGRR-DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F ++L +C+ + + + +HA +K+ ++ N I Y+KCG L F++
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVF++N ++ + + A LF +P+ D ++N+++S +A E AL F
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIY--CGFDHYASVNNSLLTCYSR 176
M ++ F + +T + ++A S N++ Q+H L C D Y + ++L+ YS+
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVY--IGSALVDMYSK 199
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +++A++VF EMG+ ++ VSWNS++ Y Q+ +EAL++FQ M+ + D TLAS
Sbjct: 200 CGNVNDAQQVFDEMGD-RNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLAS 258
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+++A SL + G + HA ++K +N I + +D+YAKCS +++ +F+ +P
Sbjct: 259 VISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCS-RIKEARFIFDSMPI 317
Query: 295 ------------------------------QPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ ++V WN +I+GY+Q E +++AL F
Sbjct: 318 RNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALSLFCL 376
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAM 378
L R P +F ++ AC++L+ LG Q H +K + + I V N+L+ M
Sbjct: 377 LKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KCG +E+ +F +M E + VS N+MI G+AQ+G G EAL LF ML++ P +IT
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITM 496
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ VLSAC H G V EG+ YFS M FG P +HY+CM+DLLGRAG L +A+ +IE MP
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMP 556
Query: 499 FNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P S+ + A ++E SN+ PYV+L+N+YA GKW +
Sbjct: 557 VQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMN 616
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
+R+LMR GV K+PG SWI++ HVF+ +D SHP K+IH+ L+ + +M+Q
Sbjct: 617 VRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMRQ 670
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 302/543 (55%), Gaps = 36/543 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+L+ R+ + R ++ +D SW+++V A+ +H + AL +++ M+
Sbjct: 96 NTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPG 155
Query: 228 GL---DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
G + +T +S L A T+ G + H H+++ G ++ + S L D+YAK G +
Sbjct: 156 GSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKF-GRLD 214
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
D VF+ +P D+V W M+ Y + F ++ R G P++ ++ V+ AC
Sbjct: 215 DARSVFDRMPVRDVVSWTAMLDRYFDAGR-DGEGFRLFVRMMRSGILPNEFTYAGVLRAC 273
Query: 345 SNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ S LGKQ+H K + +ALV MYSK G++ A R+F MP+ + VS
Sbjct: 274 AEFTSEKLGKQVHGRMAKSRT-GDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSW 332
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+MI+GYAQ+G EAL F+ +L + P ++TFV VLSACAH G V +G F +KD
Sbjct: 333 TAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKD 392
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
+G E +HY+C+IDLL R+G AE +I MP P +A
Sbjct: 393 KYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAW 452
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA ++EP N YV LANIYA+ G ++EV +RR M RG+ K P SWIEV ++
Sbjct: 453 WAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRV 512
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
HVF+ D SHP +EI+ L+++ KM++ GYV D K++ + +HSE+LA
Sbjct: 513 HVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLA 572
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
VAFG+++T G PI V KNLRICGDCH IK IS I REI VRD+ RFH FK+G CSC
Sbjct: 573 VAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCR 632
Query: 675 DYW 677
DYW
Sbjct: 633 DYW 635
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 6/257 (2%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H + A+ ++ L YA+ R+ AR +FD++P D+VS+ ++ Y D G
Sbjct: 187 HVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGE 246
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
LF M + FT +G++ A + + L KQ+H ++L+
Sbjct: 247 GFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVH 306
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G + A RVF M + D VSW +M+ Y Q+ + EAL F ++S D
Sbjct: 307 MYSKYGDMGTAMRVFRGMPK-PDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHV 365
Query: 233 TLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T +L+A + GL FH+ K G + + +IDL ++ SG +
Sbjct: 366 TFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSR-SGLFERAEDMIN 424
Query: 292 EIP-QPDLVLWNTMISG 307
+P +P+ LW +++ G
Sbjct: 425 TMPVKPNKFLWASLLGG 441
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 36/207 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C GK +H K+ S + + + +YSK G + A F
Sbjct: 265 TYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGM 324
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
++ S+ +++ YA+ + A FD + +PD V++ ++SA A G + L
Sbjct: 325 PKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGL 384
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+F +++K I DHYA V + L SR
Sbjct: 385 GIFHSIKDK----------------------------YGIEHTADHYACVIDLL----SR 412
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+G + A+ + M ++ W S++
Sbjct: 413 SGLFERAEDMINTMPVKPNKFLWASLL 439
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 222/581 (38%), Positives = 315/581 (54%), Gaps = 41/581 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+AAY + + SAR LFD++ D+VS+N++IS G + + L F M D
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVD 256
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D TL ++ A +N NL L + LH + GF NN+LL YS+ G L+ A V
Sbjct: 257 VDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEV 316
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F +MGE VSW S++ A+ REGL EA+ LF EM S L D+Y + S++ A
Sbjct: 317 FVKMGETTI-VSWTSIIAAH--VREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACS 373
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G + H H+ K+ N + + L+++YAKC G M + +F ++P ++V WNTM
Sbjct: 374 NSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKC-GSMEEANLIFSQLPVKNIVSWNTM 432
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
I GYSQ ++AL F + + PDD + CV+ AC+ L+ G++IH ++
Sbjct: 433 IGGYSQNS-LPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKG 490
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
S+ + V ALV MY KCG L A++LFD +P+ + + MIAGY HG G EA+ F
Sbjct: 491 YFSD-LHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTF 549
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
E M I P +F S+L AC H+G + EG K F MK EP+ EHY+CM+DLL R
Sbjct: 550 EKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIR 609
Query: 484 AGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVML 526
+G L+ A + IE MP P + +A K A H +LEP N YV+L
Sbjct: 610 SGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLL 669
Query: 527 ANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYL 586
AN+YA + KWEEV I+R + G++ G SWIEV+ + ++F A D SHP K I + L
Sbjct: 670 ANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLL 729
Query: 587 EEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
+++ KM + GY KE L HSEKLA+
Sbjct: 730 RKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 259/512 (50%), Gaps = 62/512 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C + L GK +H++ N + L + +Y CG
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCG------------ 106
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ R++FD I + +N L+S YA G+ ++ LF+
Sbjct: 107 -------------------DLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFE 147
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E D +T + ++ A+S + K++H + GF Y +V NSL+ Y + G
Sbjct: 148 KMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCG 207
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+ +F E+ + +D VSWNSM+ + L+ F +M++L + +D TL ++L
Sbjct: 208 EVESARILFDELSD-RDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVL 266
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A ++ +L G HA+ +K+GF + L+D+Y+KC G++ +VF ++ + +
Sbjct: 267 VACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKC-GNLNGANEVFVKMGETTI 325
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
V W ++I+ + +E +A+G F ++ G PD + V+ AC+ S SL G+++H
Sbjct: 326 VSWTSIIAAHV-REGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA-CSNSLDKGREVH 383
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
K + SN + V+NAL+ MY+KCG++E+A +F ++P N VS N+MI GY+Q+ +
Sbjct: 384 NHIKKNNMGSN-LPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLP 442
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK---------YFSMMKDMFGF 467
EAL+LF M + + P ++T VL ACA + +G++ YFS +
Sbjct: 443 NEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL------ 495
Query: 468 EPEGEHYSC-MIDLLGRAGKLTDAERLIEAMP 498
H +C ++D+ + G L A++L + +P
Sbjct: 496 -----HVACALVDMYVKCGLLVLAQQLFDMIP 522
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 197/406 (48%), Gaps = 12/406 (2%)
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
V N I + + GD +A+ L + + + + + A +L K++H +
Sbjct: 25 VDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIIS 84
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV-SWNSMVVAYGQHREGLEA 215
G + L+ Y G L + +R+F G + D++ WN ++ Y + E+
Sbjct: 85 SNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFD--GILNDKIFLWNLLMSEYAKIGNYRES 142
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+ LF++M L + D YT +L F + + + H +++K GF + + + LI
Sbjct: 143 VGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAA 202
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y KC G++ +F+E+ D+V WN+MISG + +S L F ++ +G D
Sbjct: 203 YFKC-GEVESARILFDELSDRDVVSWNSMISGCTMN-GFSRNGLEFFIQMLNLGVDVDSA 260
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ V V+ AC+N+ +LG+ +HA +K S + NN L+ MYSKCGNL A +F +
Sbjct: 261 TLVNVLVACANVGNLTLGRALHAYGVKAGF-SGGVMFNNTLLDMYSKCGNLNGANEVFVK 319
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
M E VS S+IA + + G+ EA+ LF+ M + P SV+ ACA + + +G
Sbjct: 320 MGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKG 379
Query: 455 QKYFSMMK--DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
++ + +K +M P + ++++ + G + +A + +P
Sbjct: 380 REVHNHIKKNNMGSNLPVS---NALMNMYAKCGSMEEANLIFSQLP 422
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 42/210 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G L G+ +H L+ +++ + +Y KCG
Sbjct: 462 TMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCG------------ 509
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
L A+QL FD IP+ D++ + +I+ Y G + A+S F+
Sbjct: 510 -----------LLVLAQQL--------FDMIPKKDMILWTVMIAGYGMHGFGKEAISTFE 550
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL---IKQLHCLAIYCG----FDHYASVNNSLLTC 173
MR + + + + ++ A +++ L K + C +HYA + + L+
Sbjct: 551 KMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLI-- 608
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
R+G L A + M D W +++
Sbjct: 609 --RSGNLSRAYKFIETMPIKPDAAIWGALL 636
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 340/618 (55%), Gaps = 27/618 (4%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NVF+ + LL YA+ R+ A ++F I + V++N LIS YA GD +A L
Sbjct: 132 EGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191
Query: 122 MREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + + D T + L+T + L Q+H + G +V N+++T YS G
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++A+RVF E +D V+WNSM+ AY + + EA QLF EM L D+YT S+++
Sbjct: 252 IEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVIS 311
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMKVFEEIPQPDL 298
A G H +IK G I + LI +Y K S M + + +FE + D
Sbjct: 312 AAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDH 371
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN++++G+SQ S+ AL F+ + D +F V+ +CS+L+ LG+Q+H
Sbjct: 372 VSWNSILTGFSQSG-LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHV 430
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K N V ++L+ MYSKCG +EDAR+ FD P+ ++++ NS+I GYAQHG G
Sbjct: 431 LVLKSGFEPNGF-VASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGK 489
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
AL LF M + + +ITFV+VL+AC+H G V EG + M+ +G P EHY+CM
Sbjct: 490 IALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACM 549
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
IDLLGRAG+L +A+ LIEAMPF P ++ K A+H L+LEP
Sbjct: 550 IDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEH 609
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV+L++++ +W E A+I+RLM++RGV+K PG+SWIEVK ++ F AED SHP +
Sbjct: 610 CTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCE 669
Query: 581 EIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
EI+ L E+ ++++ YV + E + G +S +LV K+ IC
Sbjct: 670 EIYLRLGELMEEIRRLDYVANSEIMSYLSGSSPYIKSGAVSVL---SVLVYKDTDICTSV 726
Query: 641 HN-AIKFISAIAGREITV 657
+ A ++ + G+ + V
Sbjct: 727 PDLAPSVLALLQGKAVEV 744
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 235/452 (51%), Gaps = 17/452 (3%)
Query: 56 AFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
A A++++ N +++ YA+ I A ++F + Q D VS+NT+I+ + + G+ E+A
Sbjct: 25 AIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETA 84
Query: 116 LSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
L K M+ F DG++ ++ A + + +Q+H + + G++ ++LL
Sbjct: 85 LEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDM 144
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ +++A VF + I++ V+WN+++ Y Q + A L M + +D T
Sbjct: 145 YAKCERVEDAFEVFKSI-NIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-E 292
A +LT + Q HA ++K G ++ + + +I Y++C G + D +VF+
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC-GSIEDAERVFDGA 262
Query: 293 IPQPDLVLWNTMISGY---SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS- 348
I DLV WN+M++ Y +Q+EE A F ++ +G+ PD ++ VISA S
Sbjct: 263 IETRDLVTWNSMLAAYLVNNQEEE----AFQLFLEMQVLGFEPDIYTYTSVISAAFEGSH 318
Query: 349 PSLGKQIHALTIKIEIRSNRISVNNALVAMY--SKCGNLEDARRLFDRMPEHNTVSLNSM 406
GK +H L IK + + ++N+L+AMY S ++++A +F+ + + VS NS+
Sbjct: 319 QGQGKSLHGLVIKRGLEF-LVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSI 377
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ G++Q G+ +AL+ FE M + + F +VL +C+ + GQ+ ++ G
Sbjct: 378 LTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS-G 436
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
FEP G S +I + + G + DA + +A P
Sbjct: 437 FEPNGFVASSLIFMYSKCGVIEDARKSFDATP 468
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 208/453 (45%), Gaps = 48/453 (10%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLR 80
+HA +K+ + + N I YS+CG + A F+
Sbjct: 223 VHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGA-------------------- 262
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I DLV++N++++AY E A LF +M+ F+ D +T + +I+A
Sbjct: 263 ----------IETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISA 312
Query: 141 S--SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY--SRNGFLDEAKRVFYEMGEIKDE 196
+ ++ K LH L I G + ++NSL+ Y S + +DEA +F + E KD
Sbjct: 313 AFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL-ENKDH 371
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
VSWNS++ + Q +AL+ F+ M S + +D Y +++L + + L L G Q H
Sbjct: 372 VSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL 431
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
++KSGF N + S LI +Y+KC G + D K F+ P+ + WN++I GY+Q
Sbjct: 432 VLKSGFEPNGFVASSLIFMYSKC-GVIEDARKSFDATPKDSSIAWNSLIFGYAQHGR-GK 489
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSN-----RISV 371
AL F + D +FV V++ACS+ +G + + S+ R+
Sbjct: 490 IALDLFFLMKDRRVKLDHITFVAVLTACSH----IGLVEEGWSFLKSMESDYGIPPRMEH 545
Query: 372 NNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
++ + + G L++A+ L + MP E + + +++ G A ++ +LE
Sbjct: 546 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELE 605
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
P + T+V + S H + E +MK+
Sbjct: 606 -PEEHCTYVLLSSMFGHLRRWNEKASIKRLMKE 637
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 9/304 (2%)
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
HCLAI G N++++ Y++ G + A ++F E + +D VSWN+M+ +
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQ-RDAVSWNTMIAGFVNLGN 80
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
AL+ + M +D Y+ SIL + + G Q H+ ++K G+ N GS
Sbjct: 81 FETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
L+D+YAKC + D +VF+ I + V WN +ISGY+Q + A + G
Sbjct: 141 LLDMYAKCE-RVEDAFEVFKSINIRNSVTWNALISGYAQVGD-RGTAFWLLDCMELEGVE 198
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
DD +F +++ + L Q+HA +K + S+ +V NA++ YS+CG++EDA R
Sbjct: 199 IDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASD-TTVCNAIITAYSECGSIEDAER 257
Query: 391 LFDRMPE-HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC---A 446
+FD E + V+ NSM+A Y + EA +LF M P T+ SV+SA +
Sbjct: 258 VFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGS 317
Query: 447 HTGK 450
H G+
Sbjct: 318 HQGQ 321
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL++C L G+ +H L LK+ + ++++ I +YSKCG + A +F+ T
Sbjct: 409 FSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 468
Query: 62 HANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALS 117
+ ++N L+ YA+ R A LF D+ + D +++ +++A + G E S
Sbjct: 469 KDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWS 528
Query: 118 LFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
K M I +HYA ++ R
Sbjct: 529 FLKSMESD----------------------------YGIPPRMEHYA----CMIDLLGRA 556
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G LDEAK + M D + W +++ A
Sbjct: 557 GRLDEAKALIEAMPFEPDAMVWKTLLGA 584
>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
Length = 1121
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 233/721 (32%), Positives = 359/721 (49%), Gaps = 81/721 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C +D G++LH L ++ ++N + +Y KCG L
Sbjct: 438 TFISSLGACSSLQD---GRALHLLIHESGFDQEVSVANALVTMYGKCGSL---------- 484
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SA+ LF ++ + DL S+N+ I+A++ G ++ + L
Sbjct: 485 --------------------LDSAK-LFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLD 523
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + F + T + + ++ L +H + CG++ V ++++ Y R G
Sbjct: 524 QMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCG 583
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD A+ +F + D + W M+ Y Q + ++ F+ M+ L TL +++
Sbjct: 584 GLDRAREIFTRVKTF-DVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLI 642
Query: 239 T--AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
T A + LE G+ + +SG + + + LI+++++ + +F+ P+
Sbjct: 643 TCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFR-SLSQARAIFDRNPEK 701
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQI 355
+ L TM++ Y + E + AL F ++ G P + V +SAC L+ PS K++
Sbjct: 702 SVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRV 761
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H ++ + S V N LV MY K G+++ AR +FDR N + N+M Y Q G+
Sbjct: 762 HERARELGLESE-TCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGV 820
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
L L M P ++TFVS+LS C H+G + E + F M+ FG +P +HYS
Sbjct: 821 TRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYS 880
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFN-----PGSIALKAANHFL----------------- 513
C+IDLL RAG+L AE I + + P +AL A L
Sbjct: 881 CVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDV 940
Query: 514 -QLEPSN----AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
++EP + + +V LANI AASG W+E +IR+ M ++G++K+PG S I VK ++H
Sbjct: 941 EKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHE 1000
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV------------PDKEKRLVHHSEKLAVA 616
FVA D HP +EI+ L + R M GYV DK L HSEKLAVA
Sbjct: 1001 FVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVA 1060
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FG+LST G + ++KNLR CGDCH AIK ISAI GREI VRD+ RFH F++G CSCGDY
Sbjct: 1061 FGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDY 1120
Query: 677 W 677
W
Sbjct: 1121 W 1121
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 226/513 (44%), Gaps = 50/513 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA------LYLKNLVPFSA-YLSNHFILLYSKCGCLSAA 53
++ ++LK C DL GK LHA L L + A +L N + +Y KCG A
Sbjct: 16 SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADC 109
AF+ H N+FS+ +L AY A A + F Q+ +PD + Y L+
Sbjct: 76 QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRL 135
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
GD L +RE D SG A + G N
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESG------------------ARFLG--------NC 169
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ Y + G DEA+R F + K+ SW S++VAY +AL+ F +M+ +
Sbjct: 170 LVQMYGKCGRTDEAQRAFDSIAH-KNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEP 228
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D + L L+ L G H + + IG+ L+ +Y KC G + ++
Sbjct: 229 DRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKC-GRLDLAKEL 287
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--L 347
F+ + + +++ W ++S +++ + G + + G PD + +++ CS+ +
Sbjct: 288 FDCLERRNVISWTILVSVFAENGRRR-ETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGV 346
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL---N 404
H + + + V AL++M+++CG ++ AR +F+++ +H+ + N
Sbjct: 347 LDEDSWMAHDYIVGGGLDREAV-VATALLSMFARCGRVDKAREIFEKVADHSAQVIECWN 405
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI YA G EAL L + + + P ITF+S L AC+ + +G+ ++ +
Sbjct: 406 AMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACS---SLQDGRALHLLIHES 462
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
GF+ E + ++ + G+ G L D+ +L M
Sbjct: 463 -GFDQEVSVANALVTMYGKCGSLLDSAKLFSEM 494
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 36/286 (12%)
Query: 333 DDC-SFVCVISACSNLSP-SLGKQIHA------LTIKIEIRSNRISVNNALVAMYSKCGN 384
D C S+ ++ C L + GK++HA L + S + N LV MY KCG
Sbjct: 12 DACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGR 71
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
++A+R FD + N S S++ Y G+ +AL F M++ + P + + +L
Sbjct: 72 TDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKE 131
Query: 445 CAHTGKVAEGQKYFSMMKD----MFGFEPEGEHY--SCMIDLLGRAGKLTDAERLIEAMP 498
C G +A+G++ + +++ + E G + +C++ + G+ G+ +A+R +++
Sbjct: 132 CGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIA 191
Query: 499 ----FNPGSIAL---------KAANHFLQLEPSNAVP--YVMLA--NIYAASGKWEEVAT 541
F+ SI + +A F Q+ + P V LA N+ + E+ A
Sbjct: 192 HKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAG 251
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
I R +Q KP S +E+ + + G + KE+ + LE
Sbjct: 252 IH-----RQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLE 292
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/514 (38%), Positives = 293/514 (57%), Gaps = 33/514 (6%)
Query: 195 DEVSWNSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
D +N+++ AY Q + AL L+ M+ + + +T +L A LE L G
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H ++K GF + H+ + ++ +Y+ C+G + KVF+E+P+ D V W+ MI GY++
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
S +A+ F+++ PD+ + V ++SAC++L LGK I A + EI + V+
Sbjct: 215 -STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIH-KPVEVS 272
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
NAL+ M++KCG++ A +LF M E VS S+I G A HG G EA LFE M + +
Sbjct: 273 NALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVA 332
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P ++ F+ +LSAC+H+G V G++YF M + P+ EHY CM+D+ R G + +A
Sbjct: 333 PDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALE 392
Query: 493 LIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLANIYAASGK 535
+ MP P + L K ++ EP + YV+L+NIYA +
Sbjct: 393 FVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLS 452
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
WE+ IR +M +G++K PG + IE+ +++ FVA D SH KEI+ ++EM R+MK+
Sbjct: 453 WEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKK 512
Query: 596 AGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
+GY P DKE L HSEKLA+AFGLL T G PI ++KNLR+C DCH+A
Sbjct: 513 SGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSA 572
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KFIS I REI +RD RFH FK G+CSCGD+W
Sbjct: 573 SKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 166/326 (50%), Gaps = 9/326 (2%)
Query: 95 DLVSYNTLISAYADCGDT-ESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQL 151
D +NTLI AYA G + + AL+L+ M + FT ++ A + L L + +
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 152 HCLAIYCGFDHYASVNNSLLTCYS-RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
H + GFD V N+++ YS G ++ A++VF EM + D V+W++M+ Y +
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPK-SDSVTWSAMIGGYARVG 213
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EA+ LF+EM ++ D T+ S+L+A T L L G A++ + H+ + +
Sbjct: 214 RSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSN 273
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
LID++AKC GD+ +K+F + + +V W ++I G + +A F+++ G
Sbjct: 274 ALIDMFAKC-GDISKALKLFRAMNEKTIVSWTSVIVGMAMHGR-GQEATCLFEEMTSSGV 331
Query: 331 HPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PDD +F+ ++SACS+ G++ +K +I +V MY + G +++A
Sbjct: 332 APDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEAL 391
Query: 390 RLFDRMP-EHNTVSLNSMIAGYAQHG 414
MP E N V L ++++ HG
Sbjct: 392 EFVRNMPIEPNPVILRTLVSACRGHG 417
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L A +L L Q H H++K G H N + + + + +F
Sbjct: 34 ALLQACNALPKLT---QIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEAD 90
Query: 296 P---DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D L+NT+I Y+Q D+AL + + P+ ++ V+ AC+ L +L
Sbjct: 91 TRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNL 150
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKC-GNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+ +H +K + I V N +V MYS C G + AR++FD MP+ ++V+ ++MI GY
Sbjct: 151 GQTVHGSVVKFGFDCD-IHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGY 209
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
A+ G EA+ LF M + P IT VS+LSAC G + G K+ +
Sbjct: 210 ARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELG-KWIEAYIERHEIHKP 268
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
E + +ID+ + G ++ A +L AM
Sbjct: 269 VEVSNALIDMFAKCGDISKALKLFRAM 295
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 144/300 (48%), Gaps = 18/300 (6%)
Query: 23 ALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSF---------NVLLA 73
AL L ++ A L N F + C QT H +V F N ++
Sbjct: 116 ALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVH 175
Query: 74 AYAR-QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGF 132
Y+ I SAR++FD++P+ D V+++ +I YA G + A++LF++M+ D
Sbjct: 176 MYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEI 235
Query: 133 TLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
T+ +++A ++ L L K + V+N+L+ +++ G + +A ++F M
Sbjct: 236 TMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAM 295
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
E K VSW S++V H G EA LF+EM S + D +L+A + + G
Sbjct: 296 NE-KTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERG 354
Query: 251 LQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
++ ++K + H G ++D+Y + +G +++ ++ +P +P+ V+ T++S
Sbjct: 355 REYFGSMMKKYKLVPKIEHYGC-MVDMYCR-TGLVKEALEFVRNMPIEPNPVILRTLVSA 412
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK + A ++ + +SN I +++KCG +S A F
Sbjct: 236 TMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAM 295
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ S+ ++ A R A LF+++ PD V++ L+SA + G E
Sbjct: 296 NEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGR 355
Query: 117 SLFKDMREK 125
F M +K
Sbjct: 356 EYFGSMMKK 364
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 320/602 (53%), Gaps = 70/602 (11%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSM 202
N+L +K +H + G D + + N +L G + + R+F++ E + +N+M
Sbjct: 21 NSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKE-PNIFLFNTM 79
Query: 203 VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGF 262
+ + E+++++ M L D +T +L A L D G++ H ++K+G
Sbjct: 80 IHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGC 139
Query: 263 HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY-------------- 308
++ + + L+ LY KC G + + KVF++IP+ ++ W +ISGY
Sbjct: 140 ESDAFVNTSLVSLYGKC-GFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 309 ------------------SQKEEYSD-----QALGCFKKLNRVGYHPDDCSFVCVISACS 345
S + Y+ +AL F K+ G+ PD + V V+ AC+
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L LG L + E N + + AL+ MY+KCG ++ A +F M + + V N
Sbjct: 259 RLGALELGNWASNLMDRNEFLGNPV-LGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWN 317
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+ I+G A G A LF M ++ I P TFV +L AC H G V EG++YF+ M+ +
Sbjct: 318 AAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERV 377
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---------------- 508
F PE EHY CM+DLLGRAG L +A +L+++MP +I A
Sbjct: 378 FTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEG 437
Query: 509 -ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
+ LEPSN+ YV+L+NIY+AS KWE+ A IR +M +RG++K PG+SWIEV +H
Sbjct: 438 VLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVH 497
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAV 615
F+ D SHP+ ++I+ L E+ + +K +GYVP +KE + HSEKLA+
Sbjct: 498 EFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAI 557
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AFGL+ST+ + I V+KNLR+CGDCH AIK IS GREI VRD RFHCF DG CSC D
Sbjct: 558 AFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKD 617
Query: 676 YW 677
YW
Sbjct: 618 YW 619
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 183/436 (41%), Gaps = 74/436 (16%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQ 78
K +HA L+ + +YL N + G + +H F+QT+ N+F F
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLF---------- 76
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLI 138
NT+I + ++ ++ MR++ D FT L+
Sbjct: 77 ---------------------NTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 139 TASSNNL--CLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI--- 193
A + L L +LH L + G + A VN SL++ Y + GF+D A +VF ++ E
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVA 175
Query: 194 ----------------------------------KDEVSWNSMVVAYGQHREGLEALQLF 219
KD VSW+SM+ Y + EAL LF
Sbjct: 176 AWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLF 235
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M++ D Y + +L A L L G + ++ F N +G+ LID+YAKC
Sbjct: 236 FKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKC 295
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G M +VF + + D+V+WN ISG + + A G F ++ + G PD +FV
Sbjct: 296 -GRMDSAWEVFRGMRKKDIVVWNAAISGLAM-SGHVKAAFGLFGQMEKSGIEPDGNTFVG 353
Query: 340 VISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-E 397
++ AC++ G+Q ++ + I +V + + G L++A +L MP E
Sbjct: 354 LLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME 413
Query: 398 HNTVSLNSMIAGYAQH 413
N + +++ G H
Sbjct: 414 ANAIVWGALLGGCRLH 429
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 15/319 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C D G LH L +K A+++ + LY KCG + A F+
Sbjct: 110 TFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDI 169
Query: 61 QHANVFSFNVLLAAY--ARQLRIA-----SARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
NV ++ +++ Y + R A A +FD + + D+VS++++I YA G +
Sbjct: 170 PEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPK 229
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
AL LF M + F D + + G++ A + L L L F + +L+
Sbjct: 230 EALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALI 289
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
Y++ G +D A VF M + KD V WN+ + A LF +M + D
Sbjct: 290 DMYAKCGRMDSAWEVFRGMRK-KDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDG 348
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHL--IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
T +L A T + G Q+ + + + + H G ++DL + +G + + ++
Sbjct: 349 NTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGC-MVDLLGR-AGFLDEAHQL 406
Query: 290 FEEIP-QPDLVLWNTMISG 307
+ +P + + ++W ++ G
Sbjct: 407 VKSMPMEANAIVWGALLGG 425
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 226/707 (31%), Positives = 362/707 (51%), Gaps = 70/707 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G DL G+ +H ++ + N I +Y KCG
Sbjct: 198 TFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG------------ 245
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR LFD++P+ D++S+N +IS Y + G L LF
Sbjct: 246 -------------------DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFF 286
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR D D TL+ +I+A + L + +H I GF SV NSL Y G
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAG 346
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA+++F M + KD VSW +M+ Y + +A+ ++ M + D T+A++L
Sbjct: 347 SWREAEKLFSRM-DCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A +L DL G++ H IK+ + + LI++Y+KC + + +F IP+ ++
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC-IDKALDIFHNIPRKNV 464
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+ W ++I+G +AL F+++ ++ P+ + ++AC+ + + GK+IHA
Sbjct: 465 ISWTSIIAGLRLNNR-CFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHA 522
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NAL+ MY +CG + A F+ + + S N ++ GY++ G G
Sbjct: 523 HVLRTGVGLDDF-LPNALLDMYVRCGRMNIAWNQFNSQKK-DVSSWNILLTGYSERGQGS 580
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ LF+ M++ + P ITF+S+L C + V +G YFS M++ +G P +HY+C+
Sbjct: 581 VVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYACV 639
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+DLLGRAG+L +A + I+ MP P A A +L+ +
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSV 699
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA GKW EVA +RR+M++ G+ G SW+EVK ++H F+++D HP K
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTK 759
Query: 581 EIHNYLEEMSRKMKQAGYVPDKEKR------------LVHHSEKLAVAFGLLSTSYGEPI 628
EI+ L+ KM + G E HSE+ A+AFGL+++ G PI
Sbjct: 760 EINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPI 819
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KNL +C CH+ +KFIS REI+VRD+ FH FKDG CSCGD
Sbjct: 820 WVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 211/441 (47%), Gaps = 49/441 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +++ C +R G ++++ L ++ S L N F+ ++ + G L A + F +
Sbjct: 96 VFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 61 QHANVFSFNVLLAAYARQLRIASA-----RQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
N+FS+NVL+ YA+Q A R L+ +PD+ ++ ++ CG
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRT---CGGIP-- 210
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+L +++H + G++ V N+L+T Y
Sbjct: 211 ----------------------------DLARGREVHVHVVRYGYELDIDVVNALITMYV 242
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + A+ +F M +D +SWN+M+ Y ++ G E L+LF M L + D+ TL
Sbjct: 243 KCGDVKSARLLFDRMPR-RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLT 301
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+++A L D G HA++I +GF + + + L +Y +G R+ K+F +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLY-AGSWREAEKLFSRMDC 360
Query: 296 PDLVLWNTMISGYSQKEEYS---DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D+V W TMISGY EY+ ++A+ ++ +++ PD+ + V+SAC+ L
Sbjct: 361 KDIVSWTTMISGY----EYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G ++H L IK + S I NN L+ MYSKC ++ A +F +P N +S S+IAG
Sbjct: 417 GVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 412 QHGIGMEALRLFEWMLETNIP 432
+ EAL F M T P
Sbjct: 476 LNNRCFEALIFFRQMKMTLQP 496
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 150/287 (52%), Gaps = 8/287 (2%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA++L M L++ +D +++ G + ++ + S + +G+ +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFL 136
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHP 332
++ + G++ D VF ++ + +L WN ++ GY+ K+ Y D+A+ + ++ VG P
Sbjct: 137 AMFVR-FGNLVDAWYVFGKMSERNLFSWNVLVGGYA-KQGYFDEAICLYHRMLWVGGVKP 194
Query: 333 DDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D +F CV+ C + P L G+++H ++ + I V NAL+ MY KCG+++ AR
Sbjct: 195 DVYTFPCVLRTCGGI-PDLARGREVHVHVVRYGYELD-IDVVNALITMYVKCGDVKSARL 252
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
LFDRMP + +S N+MI+GY ++G+G E L+LF M ++ P +T SV+SAC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G+ + + GF + + + + AG +AE+L M
Sbjct: 313 RRLGRDIHAYVITT-GFAVDISVCNSLTQMYLYAGSWREAEKLFSRM 358
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 303/561 (54%), Gaps = 74/561 (13%)
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
R+ + + +W +++ AY +AL + M ++ +T +++ +A ++
Sbjct: 63 RLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAV 122
Query: 245 EDLVGGLQFHAH-LIKSGFHQNSHIGSGLIDLYAKCS----------------------- 280
G Q HA L+ GF + ++ + +ID+Y KC
Sbjct: 123 RHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGL 182
Query: 281 -------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
GDMR +F+ +P D+V W M++GY+Q D AL F++L G D
Sbjct: 183 IVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMD-ALEVFRRLRDEGVEID 241
Query: 334 DCSFVCVISACSNLSPSLGKQIHALTIKIEIRS------NRISVNNALVAMYSKCGNLED 387
+ + V VISAC+ L G +A I+ S + + V +AL+ MYSKCGN+E+
Sbjct: 242 EVTLVGVISACAQL----GASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEE 297
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F M E N S +SMI G+A HG A++LF MLET + P ++TFV VL+AC+H
Sbjct: 298 AYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSH 357
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF-------- 499
G V +GQ+ F+ M+ +G P E Y+CM DLL RAG L A +L+E MP
Sbjct: 358 AGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWG 417
Query: 500 ----------NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
NP +A A+ +LEP N Y++L+N YA++G+W++V+ +R+L+R++
Sbjct: 418 ALLGASHVHGNP-DVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREK 476
Query: 550 GVQKKPGFSWIEVKKQM-HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP-------- 600
++K PG+SW+E K M H FVA D SHP I EI L ++ ++K GY P
Sbjct: 477 NLKKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYG 536
Query: 601 --DKEKRLV--HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
D+EKRL+ HSEKLA+AFGLLST G I +MKNLRIC DCH + S + GR+I
Sbjct: 537 INDREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIV 596
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F +G CSC ++W
Sbjct: 597 VRDNTRFHHFLNGACSCSNFW 617
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 74/469 (15%)
Query: 56 AFNQTQ--HANVFSFNVLLAAY--ARQLRIASA----------RQLFDQIPQPDLVSYNT 101
+ NQ + HA ++ N+ ++Y + LR+ +A R LF Q+ P+ ++
Sbjct: 20 SLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTA 79
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYC- 158
LI AYA G ALS + MR++R FT S L +A + + L QLH +
Sbjct: 80 LIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLG 139
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE-------------------------- 192
GF VNN+++ Y + G L A+ VF EM E
Sbjct: 140 GFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLF 199
Query: 193 ----IKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+KD V+W +MV Y Q+ ++AL++F+ + + +D TL +++A L
Sbjct: 200 DGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQL---- 255
Query: 249 GGLQFHAHLIK-----SGF--HQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
G +A+ I+ SGF N +GS LID+Y+KC G++ + VF+ + + ++ +
Sbjct: 256 -GASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKC-GNVEEAYDVFKGMRERNVFSY 313
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTI 360
++MI G++ + A+ F + G P+ +FV V++ACS+ G+Q+ A
Sbjct: 314 SSMIVGFAIHGR-ARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASME 372
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG----I 415
K + + + + S+ G LE A +L + MP E + +++ HG
Sbjct: 373 KCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVA 432
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEGQKYFSMMKD 463
+ + RLFE + P NI +LS A G+ + K ++++
Sbjct: 433 EIASKRLFE------LEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLRE 475
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 185/392 (47%), Gaps = 19/392 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSA--YLSNHFILLYSKCGCLSAAHHAFN 58
TF + C R G LHA L L FS+ Y++N I +Y KCG L A F+
Sbjct: 111 TFSALFSACAAVRHSALGAQLHAQTLL-LGGFSSDLYVNNAVIDMYVKCGSLRCARMVFD 169
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ +V S+ L+ AY R + +AR LFD +P D+V++ +++ YA AL +
Sbjct: 170 EMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEV 229
Query: 119 FKDMREKRFDTDGFTLSGLITA-----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
F+ +R++ + D TL G+I+A +S I+ + + + G V ++L+
Sbjct: 230 FRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGF-GVGDNVLVGSALIDM 288
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YS+ G ++EA VF M E ++ S++SM+V + H A++LF +M+ + + T
Sbjct: 289 YSKCGNVEEAYDVFKGMRE-RNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVT 347
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+LTA + + G Q A + K G + + + + DL ++ +G + +++ E
Sbjct: 348 FVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSR-AGYLEKALQLVET 406
Query: 293 IP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL 351
+P + D +W ++ G S D A K+L + PD+ ++ SN S
Sbjct: 407 MPMESDGAVWGALL-GASHVHGNPDVAEIASKRLFEL--EPDNIGNYLLL---SNTYASA 460
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
G+ ++ +R + N + +K G
Sbjct: 461 GRWDDVSKVRKLLREKNLKKNPGWSWVEAKNG 492
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 225/669 (33%), Positives = 351/669 (52%), Gaps = 63/669 (9%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F N LL Y + + AR LFDQ+P+ + VS+ L+S YA G +LF M
Sbjct: 114 DIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGML 173
Query: 124 EKRFDTDGFTLSGLITA-SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NGF- 179
F + F + ++ A ++ Q+H A+ D V N+L+T YS+ GF
Sbjct: 174 AC-FRPNEFAFASVLCACEEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFG 232
Query: 180 ------LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
D+A VF M E ++ +SWNSM+ + G +A+ LF M + + T
Sbjct: 233 GSCDQTTDDAWMVFKSM-EYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTT 291
Query: 234 LASILTAFT----------SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
L +L++ + L Q H +KSG + + L+ YA G +
Sbjct: 292 LLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHI 351
Query: 284 RDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
DC K+F + + D+V W +IS +++++ +QA F +L+R + D +F +
Sbjct: 352 SDCFKLFLDTSGEHDIVSWTAIISVFAERD--PEQAFLLFCQLHRENFVLDRHTFSIALK 409
Query: 343 ACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
AC+ ++ ++H+ +K ++ + V+NAL+ Y + G+L + ++F M H+ V
Sbjct: 410 ACAYFVTEKNATEVHSQVMKQGFHNDTV-VSNALIHAYGRSGSLALSEQVFTEMGCHDLV 468
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S NSM+ YA HG +AL LF+ M ++ P + TFV++L+AC+H G V EG + F+ M
Sbjct: 469 SWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSM 525
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI----------------- 504
+ G P +HYSCM+DL GRAGK+ +AE LI MP P S+
Sbjct: 526 TESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADL 585
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A AA+ F L+P N++ Y+ ++NIY++ G + E IR+ MRD V+K+PG SW+EV K
Sbjct: 586 AKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGK 645
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEK 612
Q+H F + HP + I + LE + ++K+ GY P+ E +L HHSEK
Sbjct: 646 QVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEK 705
Query: 613 LAVAFGLL----STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
+A+ F ++ S G I +MKN+RIC DCHN +K S + +EI VRD+ RFH FK
Sbjct: 706 MALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKY 765
Query: 669 GRCSCGDYW 677
CSC DYW
Sbjct: 766 ATCSCNDYW 774
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 196/428 (45%), Gaps = 44/428 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C +D+ G +HA LK + FS Y++N I +YSKC + +QT
Sbjct: 183 FASVLCAC-EEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCS--GGFGGSCDQT- 238
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A +F + +L+S+N++IS + G + A+ LF
Sbjct: 239 -------------------TDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAH 279
Query: 122 MREKRFDTDGFTLSGLITASS---------NNLCLIK---QLHCLAIYCGFDHYASVNNS 169
M + TL G++++ + NN +K QLHCL + G V +
Sbjct: 280 MYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTA 339
Query: 170 LLTCYSR-NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG 228
L+ Y+ G + + ++F + D VSW +++ + + R+ +A LF ++
Sbjct: 340 LVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAE-RDPEQAFLLFCQLHRENFV 398
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
LD +T + L A + H+ ++K GFH ++ + + LI Y + SG + +
Sbjct: 399 LDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGR-SGSLALSEQ 457
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
VF E+ DLV WN+M+ Y+ D AL FK+++ HPD +FV +++ACS+
Sbjct: 458 VFTEMGCHDLVSWNSMLKSYAIHGRAKD-ALDLFKQMD---VHPDSATFVALLAACSHAG 513
Query: 349 -PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSM 406
G QI + + + + +V +Y + G + +A L +MP + ++V +S+
Sbjct: 514 LVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSL 573
Query: 407 IAGYAQHG 414
+ +HG
Sbjct: 574 LGSCRKHG 581
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
N I + N L+ MY KCG+L+ AR LFD+MP N VS +++GYAQ G+ E LF M
Sbjct: 113 NDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM 172
Query: 427 LETNIPPTNITFVSVLSAC 445
L P F SVL AC
Sbjct: 173 LAC-FRPNEFAFASVLCAC 190
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q H + N L+ AY R +A + Q+F ++ DLVS+N+++ +YA G + AL L
Sbjct: 430 QGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDL 489
Query: 119 FKDMREKRFDTDGFTL-------SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
FK M + D+ F +GL+ + + + H +A + DHY+ ++
Sbjct: 490 FKQM-DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPH--LDHYS----CMV 542
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
Y R G + EA+ + +M D V W+S++ + +H E
Sbjct: 543 DLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEA 583
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 290/495 (58%), Gaps = 37/495 (7%)
Query: 215 ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
ALQLF+EM +L AS+L+ +L D+ G Q HA LI G +G+ LID
Sbjct: 2 ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61
Query: 275 LYAKCSGDMRDCMK-VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+Y+KC M D K +F + W +I+G Q ++ ++AL F + R G PD
Sbjct: 62 MYSKCG--MLDAAKTIFANKSDKTAISWTALITGCVQNGQH-EEALQLFCNMRRAGLSPD 118
Query: 334 DCSFVCVISACSNLSP-SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
+ +I + S+L +G+Q+HA LT + S + +AL+ MY+KCG L++A R
Sbjct: 119 RATCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSS--VFSGSALLDMYAKCGCLDEAIRT 176
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
F+ MPE N+++ N++I+ YAQ+G A+R+F+ ML P +TF+SVL+AC+H G
Sbjct: 177 FNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLA 236
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------- 504
E KYF +M+ P EHYSC+ID LGRAG +++++ MPF +
Sbjct: 237 EECMKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILH 296
Query: 505 ----------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
A AA + + P++A YV+L+NIYA +G WE A ++++MRDRGV+K+
Sbjct: 297 SCRIYGNQDLATVAAENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKE 356
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------K 602
G SW+E+K+++++F + D ++PMI EI LE + +M + GY PD K
Sbjct: 357 SGNSWVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQK 416
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
+ L +HSE+LA+AF L++T G PI VMKNL C DCH AIK IS I R+I VRD+ R
Sbjct: 417 LESLKYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRR 476
Query: 663 FHCFKDGRCSCGDYW 677
FH FKDG CSCGDYW
Sbjct: 477 FHHFKDGFCSCGDYW 491
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 128/234 (54%), Gaps = 5/234 (2%)
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
AL LF++M+ FD + L++ + ++ + +Q+H I G + N+L+
Sbjct: 2 ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G LD AK +F + K +SW +++ Q+ + EALQLF M L D
Sbjct: 62 MYSKCGMLDAAKTIFANKSD-KTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRA 120
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T +SI+ + +SL + G Q HA+L SG + GS L+D+YAKC G + + ++ F E
Sbjct: 121 TCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKC-GCLDEAIRTFNE 179
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+P+ + + WN +IS Y+Q + + A+ F + G+ PD +F+ V++ACS+
Sbjct: 180 MPEKNSITWNAVISAYAQYGQ-AKNAIRMFDSMLHCGFCPDPVTFLSVLAACSH 232
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 188/474 (39%), Gaps = 73/474 (15%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +L D+ G+ +HA + + ++ N I +YSKCG L A
Sbjct: 21 FASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALIDMYSKCGMLDA--------- 71
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A+ +F +S+ LI+ G E AL LF +
Sbjct: 72 ----------------------AKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCN 109
Query: 122 MREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASV--NNSLLTCYSRN 177
MR D T S +I +SS + + +QLH G H +SV ++LL Y++
Sbjct: 110 MRRAGLSPDRATCSSIIKSSSSLGVIGIGRQLHAYLTTSG--HMSSVFSGSALLDMYAKC 167
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LDEA R F EM E K+ ++WN+++ AY Q+ + A+++F M+ D T S+
Sbjct: 168 GCLDEAIRTFNEMPE-KNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSV 226
Query: 238 LTAFTSLEDLVGGLQFHAHLIK---SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
L A S L + L++ S H S +ID + +G KV +E+P
Sbjct: 227 LAA-CSHNGLAEECMKYFDLMRYYNSMSPWKEHY-SCVIDALGR-AGCFDKIQKVLDEMP 283
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
+ D V+W++++ Y +Q L N P D + ++ SN+ G
Sbjct: 284 FEADPVIWSSILHSC---RIYGNQDLATVAAENLFTMVPTDATAYVIL---SNIYAKAGN 337
Query: 354 QIHALTIK--IEIRSNRISVNNALVAMYSKCGNL--------------EDARRLFDRMPE 397
A +K + R R N+ V + K E+ RL++ M +
Sbjct: 338 WEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDK 397
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-----TNIPP-TNITFVSVLSAC 445
S + +E+L+ L N PP T IT + LSAC
Sbjct: 398 QGYEPDTSCALHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITVMKNLSAC 451
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 216/665 (32%), Positives = 349/665 (52%), Gaps = 46/665 (6%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H H N F + L+ YA+ + AR++F+ +P+ ++V++ TL+ + +
Sbjct: 89 HVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKH 148
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
A+ +F++M +TLS ++ A S+ +L L Q H I D SV ++L +
Sbjct: 149 AIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCS 208
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
YS+ G L++A + F + E K+ +SW S V A G + ++ L+LF EM+S + + +
Sbjct: 209 LYSKCGRLEDALKAFSRIRE-KNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEF 267
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
TL S L+ + L G Q + IK G+ N + + L+ LY K SG + + + F
Sbjct: 268 TLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLK-SGFIVEAHRFFNR 326
Query: 293 IPQPDLVLWNTMISGYSQKEEYS----------DQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ +V WN MI+G++Q E + +AL F KLN+ G PD + V+S
Sbjct: 327 MDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLS 386
Query: 343 ACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
CS L+ G+QIHA TIK S+ I V+ +L++MY+KCG++E A + F M +
Sbjct: 387 VCSRMLAIEQGEQIHAQTIKTGFLSDVI-VSTSLISMYNKCGSIERASKAFLEMSTRTMI 445
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ SMI G++QHG+ +AL +FE M + P +TFV VLSAC+H G V++ YF +M
Sbjct: 446 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIM 505
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SI 504
+ + +P +HY CM+D+ R G+L A I+ M + P +
Sbjct: 506 QKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLEL 565
Query: 505 ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
A+ L L+P + YV+L N+Y ++ ++++V+ +R++M V K +SWI +K
Sbjct: 566 GFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKD 625
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY-------------VPDKEKRLVHHSE 611
+++ F D +HP I LE++ K K GY ++HSE
Sbjct: 626 KVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSE 685
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLA+ FGL + PI V+K+ IC D HN IK +S + GREI V+D+ R H F +G C
Sbjct: 686 KLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGEC 745
Query: 672 SCGDY 676
SCG++
Sbjct: 746 SCGNF 750
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 196/434 (45%), Gaps = 59/434 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C + L G HA +K + F + + LYSKCG L A AF++
Sbjct: 167 TLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRI 226
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV +S+ + +SA D G L LF
Sbjct: 227 REKNV-------------------------------ISWTSAVSACGDNGAPVKGLRLFV 255
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + + FTL+ ++ +L L Q+ L I G++ V NSLL Y ++G
Sbjct: 256 EMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSG 315
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-----------GLEALQLFQEMVSLQL 227
F+ EA R F M ++ V+WN+M+ + Q E G EAL++F ++ +
Sbjct: 316 FIVEAHRFFNRMDDV-SMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGM 374
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D++TL+S+L+ + + + G Q HA IK+GF + + + LI +Y KC G +
Sbjct: 375 KPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKC-GSIERAS 433
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
K F E+ ++ W +MI+G+SQ S QAL F+ ++ G P+ +FV V+SACS+
Sbjct: 434 KAFLEMSTRTMIAWTSMITGFSQ-HGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSH- 491
Query: 348 SPSLGKQIHALTIKIEIRSNRISVN------NALVAMYSKCGNLEDARRLFDRMP-EHNT 400
G AL EI + + +V M+ + G LE A +M E +
Sbjct: 492 ---AGMVSQALNY-FEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSE 547
Query: 401 VSLNSMIAGYAQHG 414
++ IAG HG
Sbjct: 548 FIWSNFIAGCRSHG 561
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 134/245 (54%), Gaps = 5/245 (2%)
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H H++K+G H N + S L+++YAKC G+M D +VFE +P+ ++V W T++ G+ Q +
Sbjct: 87 HGHVMKTGCHDNFFVMSFLVNVYAKC-GNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN 372
A+ F+++ G +P + V+ ACS+L S LG Q HA IK + + SV
Sbjct: 146 -PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFD-TSVG 203
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
+AL ++YSKCG LEDA + F R+ E N +S S ++ +G ++ LRLF M+ +I
Sbjct: 204 SALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIK 263
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
P T S LS C + G + S+ FG+E + ++ L ++G + +A R
Sbjct: 264 PNEFTLTSALSQCCEIPSLELGTQVCSLCIK-FGYESNLRVRNSLLYLYLKSGFIVEAHR 322
Query: 493 LIEAM 497
M
Sbjct: 323 FFNRM 327
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 236/705 (33%), Positives = 372/705 (52%), Gaps = 67/705 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL++C G DL G+ +HA L+ + + N + +Y+KCG
Sbjct: 197 TFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCG------------ 244
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +AR++FD + D +S+N +I+ + + + E+ L LF
Sbjct: 245 -------------------DVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFL 285
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E + + T++ + AS ++L K++H LA+ GF + NSL+ YS G
Sbjct: 286 HMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLG 345
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ EA VF M E +D +SW +M+ Y ++ +AL+++ M + D T+AS L
Sbjct: 346 RMGEACTVFSRM-ETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASAL 404
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL L G++ H GF + + + L+++YAK S + ++VF+ +P D+
Sbjct: 405 AACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAK-SKIIEKAIEVFKYMPDKDV 463
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
+ W++MI+G+ + + +AL F+ + P+ +F+ ++AC+ S GK+IHA
Sbjct: 464 ISWSSMIAGFCFNHK-NFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHA 521
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ I S V NAL+ +Y KCG A F + VS N M+AG+ HG G
Sbjct: 522 HVLRQGIASEGY-VPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGD 580
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
AL F MLET P +TFV++L C+ G V++G + F M + + P +HY+CM
Sbjct: 581 IALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACM 640
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLL R G+LT+ I MP P + + AA L+LEP++A
Sbjct: 641 VDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDA 700
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+L+++YA +G W EV+ +R+ MR +G++ G SW+EVK +H F+ +D SHP IK
Sbjct: 701 GYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIK 760
Query: 581 EIHNYLEEMSRKMKQAGYVP-----------DKEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
EI++ L+ + +MK +G+ P K+ L HSE+LAVAFGL++T+ G I
Sbjct: 761 EINDVLDGIYERMKASGFAPVESYSLEDKEVSKDDVLCGHSERLAVAFGLINTTPGTSIC 820
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
V KN C CH ++ IS I REITVRDT FH F+DG CSCG
Sbjct: 821 VTKNQYTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCSCG 865
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 5/292 (1%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ N++L+ R G A +VF +M E +D SWN MV YG+ EAL L+ M+
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPE-RDVFSWNVMVGGYGKAGFLEEALDLYHRMLWA 189
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
D+YT +L + + DL G + HAH+++ G + + L+ +YAKC GD+
Sbjct: 190 GARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKC-GDVEA 248
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
KVF+ + D + WN MI+G+ + E + L F + P+ + V A
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHE-CEAGLELFLHMLEDEVEPNLMTITSVTVASG 307
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
LS K+IHAL +K ++ ++ N+L+ MYS G + +A +F RM + +S
Sbjct: 308 LLSDLDFAKEIHALAVKRGFATD-VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWT 366
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+MI+GY ++G +AL ++ M N+ P ++T S L+ACA G++ G K
Sbjct: 367 AMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIK 418
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ + NA+++M + G A ++F +MPE + S N M+ GY + G EAL L+ ML
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
P TF VL +C + G++ + + FG E + + ++ + + G +
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVL-RFGLGVEVDVLNALVTMYAKCGDVE 247
Query: 489 DAERLIEAM 497
A ++ + M
Sbjct: 248 AARKVFDGM 256
>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 341/647 (52%), Gaps = 44/647 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
L+ Y R R+ A+ FD+I + +VS+N LI+ Y+ + E +L +F++M +
Sbjct: 149 TALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIA 208
Query: 129 TDGFTLSGLITASSNNLCLIKQ----LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
+ T+ + +A + I +H +I G +V NS++ + R G + A
Sbjct: 209 PNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRAN 268
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
+F ++ + +D SWN+M+ A+ ++ EAL L+ M + D T ++L A
Sbjct: 269 EIFEKVDQ-RDVCSWNTMIAAFAKNGHVFEALDLYGRMT---IRPDGVTFVNVLEACDCP 324
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
+DL G H G+ + + + L+ +Y +C G + +VF I P ++ N +
Sbjct: 325 DDLERGESIHRDARAHGYDSDLIVATALVSMYRRC-GRLDRAAEVFAAIQHPGVITLNAI 383
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG--KQIHALTIKI 362
I+ ++Q +D +L F+++ ++G P + V V+ AC+ + + +H +
Sbjct: 384 IAAHAQFGR-ADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAEC 442
Query: 363 --EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + I V NALV MY+KCG+L+ AR +FD P+ N + N+++AGYAQHG A+
Sbjct: 443 PGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAV 502
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
RL M I P I+F + LSA +H +V +G + F + +G P EHY ++DL
Sbjct: 503 RLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDL 562
Query: 481 LGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPY 523
LGRAG L +AE + +M + A++AA + ++PS+ Y
Sbjct: 563 LGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASY 622
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
+L+N+Y+A+G+W+E IRR M + G +K+PG SWIEVK ++H F +D SHP EI+
Sbjct: 623 TVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIY 682
Query: 584 NYLEEMSRKMK-QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
L+E+ +K + YVPD +E L HHSEKLA+ FGL+ T G I +
Sbjct: 683 ERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITI 742
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLRIC DCH +K S REI VRD YRFH F G CSC D W
Sbjct: 743 IKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 189/382 (49%), Gaps = 11/382 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F N LL YAR A L D++P+ + VS+N +I A A GD +L F+ M
Sbjct: 46 HLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRML 105
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ D LI A + + + A GFD V +L+ Y R G LD A
Sbjct: 106 QDGSVPDAVVFLSLIKA-PGTIQEGEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRA 164
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
K F + E + VSWN+++ Y + E ++L++F+EM+ + + T+ I +A
Sbjct: 165 KDAFDRIQE-RGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAG 223
Query: 244 LEDLVG--GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ + G HA I SG + + + +I+L+ + G++ ++FE++ Q D+ W
Sbjct: 224 IAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGR-GGNISRANEIFEKVDQRDVCSW 282
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
NTMI+ ++ K + +AL + R+ PD +FV V+ AC G+ IH
Sbjct: 283 NTMIAAFA-KNGHVFEALDLY---GRMTIRPDGVTFVNVLEACDCPDDLERGESIHRDAR 338
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
S+ I V ALV+MY +CG L+ A +F + ++LN++IA +AQ G +L
Sbjct: 339 AHGYDSDLI-VATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSL 397
Query: 421 RLFEWMLETNIPPTNITFVSVL 442
F ML+ I P+ T V+VL
Sbjct: 398 LHFRQMLQLGIRPSKFTLVAVL 419
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 157/335 (46%), Gaps = 43/335 (12%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G +HA + + + ++N I L+ + G +S A+ F + +V S+N ++AA+A+
Sbjct: 232 GNLIHACSIDSGLISVTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAK 291
Query: 78 QLRIASARQLFDQIP-QPDLVSYNTLISAYADC-GDTESALSLFKDMREKRFDTDGFTLS 135
+ A L+ ++ +PD V++ ++ A DC D E S+ +D R +D+D
Sbjct: 292 NGHVFEALDLYGRMTIRPDGVTFVNVLEA-CDCPDDLERGESIHRDARAHGYDSD----- 345
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
LI A+ +L++ Y R G LD A VF + +
Sbjct: 346 -LIVAT---------------------------ALVSMYRRCGRLDRAAEVFAAI-QHPG 376
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FH 254
++ N+++ A+ Q +L F++M+ L + +TL ++L A + + H
Sbjct: 377 VITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLH 436
Query: 255 AHLIKSGFHQNSH---IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
+ + + H + + L+++YAKC GD+ +F+ PQ ++ WN +++GY+Q
Sbjct: 437 RWMAECPGDCDPHDILVRNALVNMYAKC-GDLDAARGIFDAAPQGNVSTWNAIMAGYAQ- 494
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
Y+D A+ ++ G PD SF +SA S+
Sbjct: 495 HGYADMAVRLLYEMQLAGISPDPISFTAALSASSH 529
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
LA ++ TSL+ G + H +I+SG+ + + + L+ +YA+ RD + + +
Sbjct: 18 LARLVDESTSLDQ---GRKIHRRVIESGYGDHLFLSNHLLHMYARLESS-RDAELLLDRM 73
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
P+ + V WN +I +Q ++ ++L F+++ + G PD F+ +I A + G+
Sbjct: 74 PRRNAVSWNAVIRANAQAGDFP-RSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE--GE 130
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+ K + + V AL+ MY +CG L+ A+ FDR+ E VS N++I Y++
Sbjct: 131 IVQDFAKKSGFDRSFV-VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRG 189
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAH-TGKVAEGQKYFSMMKDMFGFEPEGE 472
++LR+F ML I P +T + + SA A K+ G
Sbjct: 190 DEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTT 249
Query: 473 HYSCMIDLLGRAGKLTDAERLIE 495
+ +I+L GR G ++ A + E
Sbjct: 250 VANSIINLFGRGGNISRANEIFE 272
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+ C DL G+S+H + ++ + +Y +CG L A F
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
QH V + N ++AA+A+ G + +L F+
Sbjct: 373 QHPGVITLNAIIAAHAQ-------------------------------FGRADGSLLHFR 401
Query: 121 DMREKRFDTDGFTLSGLI---TASSNNLCLIKQLHCLAIYCGFD---HYASVNNSLLTCY 174
M + FTL ++ S + LH C D H V N+L+ Y
Sbjct: 402 QMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMY 461
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G LD A+ +F + + +WN+++ Y QH A++L EM + D +
Sbjct: 462 AKCGDLDAARGIF-DAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISF 520
Query: 235 ASILTA 240
+ L+A
Sbjct: 521 TAALSA 526
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 31 PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQ 90
P + N + +Y+KCG L AA F+ NV ++N ++A YA+ A +L +
Sbjct: 448 PHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYE 507
Query: 91 IP----QPDLVSYNTLISAYADCGDTESALSLF 119
+ PD +S+ +SA + E +F
Sbjct: 508 MQLAGISPDPISFTAALSASSHARQVEDGARIF 540
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 234/734 (31%), Positives = 376/734 (51%), Gaps = 83/734 (11%)
Query: 22 HALYLKNLVPFSAYLS-NHFILLYSKCGCLSAAHH----------AFNQTQHANVFSFNV 70
HAL+L + ++L N + + C S HH A + F N
Sbjct: 146 HALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANA 205
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR-EKRFDT 129
L++ YA+ +A +LF+QIP+ D+ S+NT+ISA ++A LF++M+ F
Sbjct: 206 LVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRV 265
Query: 130 DGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
D FTLS L+TAS+ +L +Q+H A+ G + +V N L+ YS+ G +D+ + +F
Sbjct: 266 DDFTLSILLTASA-SLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEG 324
Query: 190 MGEIKDEVSWNSMVVAYGQ-------------------------------HREGLEALQL 218
M ++D ++W MV AY + + +G EA++L
Sbjct: 325 M-RVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRL 383
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F MV L L ++L S++ A L D Q H +K GF N ++ + L+D+Y +
Sbjct: 384 FVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTR 443
Query: 279 CSGDMRDCMKVF--EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDC 335
C G M D K+F E+ + V+W MI GY++ + ++A+ F G D+
Sbjct: 444 C-GRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQ-PEEAIYLFHVGRSDGKVIMDEV 501
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+ ++ C + +GKQIH IK + N + V NA+V+MY KCG+++DA ++F
Sbjct: 502 AAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFN-LEVGNAVVSMYFKCGSVDDAMKVFGD 560
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT--GKVA 452
MP + V+ N++I+G H G AL ++ ML I P +TFV ++SA T V
Sbjct: 561 MPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVD 620
Query: 453 EGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK----- 507
+ + F+ M+ ++ EP HY+ I +LG G L +A I MPF P ++ +
Sbjct: 621 DCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDG 680
Query: 508 ------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP 555
AA + L LEP + +++++N+Y+ASG+W+ +R MR++G +K P
Sbjct: 681 CRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHP 740
Query: 556 GFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KE 603
SWI +K+++ F D SHP K+I LE + + + GY PD K+
Sbjct: 741 AQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEVEEHHKK 800
Query: 604 KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRF 663
L HHS KLA +G+L T G+PI ++KN+ +CGDCH +K+ S + R+I +RD+ F
Sbjct: 801 IFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFLRDSSGF 860
Query: 664 HCFKDGRCSCGDYW 677
HCF +G+CSC D W
Sbjct: 861 HCFSNGQCSCKDCW 874
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 206/421 (48%), Gaps = 62/421 (14%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
++N+L++ Y + A R+F + + VS+ +++ +HR+ AL LF M +
Sbjct: 100 LSNALISTYLKLNLFPHALRLFLSLPS-PNVVSYTTLISFLSKHRQH-HALHLFLRMTTR 157
Query: 226 -QLGLDMYTLASILTAFTSL-EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
L + YT ++LTA +SL GLQ HA +K+ + + + L+ LYAK
Sbjct: 158 SHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAK-HASF 216
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVIS 342
+K+F +IP+ D+ WNT+IS Q Y D A F+ + + DD + +++
Sbjct: 217 HAALKLFNQIPRRDIASWNTIISAALQDSLY-DTAFRLFRNMQATDAFRVDDFTLSILLT 275
Query: 343 ACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED--------------- 387
A ++L G+Q+HA +K+ + ++ ++V N L+ YSK GN++D
Sbjct: 276 ASASLME--GQQVHAHAVKLGLETD-LNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVIT 332
Query: 388 ----------------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
A ++FD MPE N+VS N+++AG+ ++ G EA+RLF M+E +
Sbjct: 333 WTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGL 392
Query: 432 PPTNITFVSVLSACAHTG--KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
T+ + SV+ AC G KV++ F++ FGF G + ++D+ R G++ D
Sbjct: 393 ELTDFSLTSVVDACGLLGDYKVSKQVHGFAV---KFGFGSNGYVEAALLDMYTRCGRMVD 449
Query: 490 AERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
A G + L+ +LE ++V + + YA +G+ EE + + R
Sbjct: 450 A-----------GKMFLR-----WELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSD 493
Query: 550 G 550
G
Sbjct: 494 G 494
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 225/471 (47%), Gaps = 51/471 (10%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-RF 127
N L++ Y + A +LF +P P++VSY TLIS + AL LF M +
Sbjct: 102 NALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLIS-FLSKHRQHHALHLFLRMTTRSHL 160
Query: 128 DTDGFTLSGLITASSNNLCLIK---QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
+ +T ++TA S+ L QLH A+ V N+L++ Y+++ A
Sbjct: 161 PPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAAL 220
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTS 243
++F ++ +D SWN+++ A Q A +LF+ M + +D +TL+ +LTA S
Sbjct: 221 KLFNQIPR-RDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASAS 279
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD------------------ 285
L + G Q HAH +K G + ++G+GLI Y+K G++ D
Sbjct: 280 LME---GQQVHAHAVKLGLETDLNVGNGLIGFYSKF-GNVDDVEWLFEGMRVRDVITWTE 335
Query: 286 -------------CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+KVF+E+P+ + V +NT+++G+ + E+ +A+ F ++ G
Sbjct: 336 MVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQ-GFEAMRLFVRMVEEGLEL 394
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D S V+ AC L + KQ+H +K SN V AL+ MY++CG + DA ++
Sbjct: 395 TDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGY-VEAALLDMYTRCGRMVDAGKM 453
Query: 392 FDR--MPEHNTVSLNSMIAGYAQHGIGMEALRLFE-WMLETNIPPTNITFVSVLSACAHT 448
F R + E ++V +MI GYA++G EA+ LF + + + S+L C
Sbjct: 454 FLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTI 513
Query: 449 GKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G + G Q + ++K GF E + ++ + + G + DA ++ MP
Sbjct: 514 GHLDMGKQIHCHVIKCGLGFNLEVG--NAVVSMYFKCGSVDDAMKVFGDMP 562
>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
Length = 789
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 215/645 (33%), Positives = 341/645 (52%), Gaps = 44/645 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y R R+ A+ FD+I + +VS+N LI+ Y+ + E +L +F++M + +
Sbjct: 151 LIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPN 210
Query: 131 GFTLSGLITASSNNLCLIKQ----LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
T+ + +A + I +H +I G +V NS++ + R G + A +
Sbjct: 211 AVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDI 270
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F +M + +D SWN+M+ A+ Q+ AL L+ M + D T ++L A +D
Sbjct: 271 FEKM-DRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFVNVLEACDCPDD 326
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G H + G+ + + + L+ +Y +C G + +VF I P ++ N +I+
Sbjct: 327 LERGESIHRDVRAHGYDSDLIVATALVSMYRRC-GRLDRAAEVFAAIQHPGVITLNAIIA 385
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG--KQIHALTIKI-- 362
++Q +D +L F+++ ++G P + V V+ AC+ + + +H +
Sbjct: 386 AHAQFGR-ADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPG 444
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ + I V NALV MY+KCG+L+ AR +FD P+ N + N+++AGYAQHG A+RL
Sbjct: 445 DCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRL 504
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
M I P I+F + LSA +H +V +G + F + +G P EHY ++DLLG
Sbjct: 505 LYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLG 564
Query: 483 RAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVM 525
RAG L +AE + +M + A++AA + ++PS+ Y +
Sbjct: 565 RAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTV 624
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L+N+Y+A+G+W+E IRR M + G +K+PG SWIEVK ++H F +D SHP EI+
Sbjct: 625 LSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYER 684
Query: 586 LEEMSRKMK-QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
L+E+ +K + YVPD +E L HHSEKLA+ FGL+ T G I ++K
Sbjct: 685 LDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIK 744
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLRIC DCH +K S REI VRD YRFH F G CSC D W
Sbjct: 745 NLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 186/382 (48%), Gaps = 11/382 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F N LL YAR A L D++P+ + +S+N +I A A GD +L F+ M
Sbjct: 46 HLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRML 105
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ D LI A + + + A GFD V +L+ Y R G LD A
Sbjct: 106 QDGSLPDAVVFLSLIKA-PRTIQEGEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRA 164
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
K F + E + VSWN+++ Y + E ++L++F+EM+ + + T+ I +A
Sbjct: 165 KDAFDRIQE-RGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAG 223
Query: 244 LEDLVG--GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ + G H+ I SG + + + +I+L+ + G++ +FE++ + D+ W
Sbjct: 224 IAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGR-GGNITRANDIFEKMDRRDVCSW 282
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
NTMIS ++Q S G R+ PD +FV V+ AC G+ IH +
Sbjct: 283 NTMISAFAQNGHSS----GALDLYGRMTIRPDGVTFVNVLEACDCPDDLERGESIHR-DV 337
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + + V ALV+MY +CG L+ A +F + ++LN++IA +AQ G +L
Sbjct: 338 RAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSL 397
Query: 421 RLFEWMLETNIPPTNITFVSVL 442
F ML+ I P+ T V+VL
Sbjct: 398 LHFRQMLQLGIRPSKFTLVAVL 419
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 9/265 (3%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
LA ++ TSLE G + H +I+SG+ + + + L+ +YA+ RD + + +
Sbjct: 18 LARLVDESTSLEQ---GRKIHRRVIESGYGDHLFLSNHLLHMYARLESS-RDAELLLDRM 73
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
P+ + + WN +I +Q ++ ++L F+++ + G PD F+ +I A + G+
Sbjct: 74 PRRNALSWNAVIRANAQAGDFP-RSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE--GE 130
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+ K + + V AL+ MY +CG L+ A+ FDR+ E VS N++I Y++
Sbjct: 131 IVQEFAEKSGFDRSFV-VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRG 189
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAH-TGKVAEGQKYFSMMKDMFGFEPEGE 472
++LR+F ML I P +T + + SA A K+ G
Sbjct: 190 DEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTT 249
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ +I+L GR G +T A + E M
Sbjct: 250 VANSIINLFGRGGNITRANDIFEKM 274
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 158/335 (47%), Gaps = 43/335 (12%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G +H+ + + + ++N I L+ + G ++ A+ F + +V S+N +++A+A+
Sbjct: 232 GNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQ 291
Query: 78 QLRIASARQLFDQIP-QPDLVSYNTLISAYADC-GDTESALSLFKDMREKRFDTDGFTLS 135
+ A L+ ++ +PD V++ ++ A DC D E S+ +D+R +D+D
Sbjct: 292 NGHSSGALDLYGRMTIRPDGVTFVNVLEA-CDCPDDLERGESIHRDVRAHGYDSD----- 345
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
LI A+ +L++ Y R G LD A VF + +
Sbjct: 346 -LIVAT---------------------------ALVSMYRRCGRLDRAAEVFAAI-QHPG 376
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FH 254
++ N+++ A+ Q +L F++M+ L + +TL ++L A + + H
Sbjct: 377 VITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLH 436
Query: 255 AHLIKSGFHQNSH---IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
+ + + H + + L+++YAKC GD+ +F+ PQ ++ WN +++GY+Q
Sbjct: 437 RWMAECPGDCDPHDILVRNALVNMYAKC-GDLDAARGIFDAAPQGNVSTWNAIMAGYAQ- 494
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
Y++ A+ ++ G PD SF +SA S+
Sbjct: 495 HGYANMAVRLLYEMQLAGISPDPISFTAALSASSH 529
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+ C DL G+S+H + ++ + +Y +CG L A F
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
QH V + N ++AA+A+ G + +L F+
Sbjct: 373 QHPGVITLNAIIAAHAQ-------------------------------FGRADGSLLHFR 401
Query: 121 DMREKRFDTDGFTLSGLI---TASSNNLCLIKQLHCLAIYCGFD---HYASVNNSLLTCY 174
M + FTL ++ S + LH C D H V N+L+ Y
Sbjct: 402 QMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMY 461
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G LD A+ +F + + +WN+++ Y QH A++L EM + D +
Sbjct: 462 AKCGDLDAARGIF-DAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISF 520
Query: 235 ASILTA 240
+ L+A
Sbjct: 521 TAALSA 526
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 31 PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQ 90
P + N + +Y+KCG L AA F+ NV ++N ++A YA+ A +L +
Sbjct: 448 PHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYE 507
Query: 91 IP----QPDLVSYNTLISAYADCGDTESALSLF 119
+ PD +S+ +SA + E +F
Sbjct: 508 MQLAGISPDPISFTAALSASSHARQVEDGARIF 540
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++ N L+ YA+ + +AR +FD PQ ++ ++N +++ YA G A+ L +M+
Sbjct: 450 DILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQ 509
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCYSR 176
D + + ++ASS+ + + +HY +V + L R
Sbjct: 510 LAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLL----GR 565
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
G+L+EA+ M D +W +++ A H++ A++ + +V++
Sbjct: 566 AGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAI 614
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 329/624 (52%), Gaps = 63/624 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C L G LH + + + + ++N + +YSKC CL A
Sbjct: 161 TFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQA-------- 212
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR+LFD +PQ DLVS+N +IS Y G A LF+
Sbjct: 213 -----------------------ARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFR 249
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASV-----NNSLLTCYS 175
M D T + + + L+ HC I+ +A V ++L+ Y
Sbjct: 250 GMISAGIKPDSITFASFLPCVNE---LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ ++ A++ + D V +M+ Y + + EAL+ F+ +V ++ T +
Sbjct: 307 KCRDVEMAQKNLCQSSSF-DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
SI AF L L G + H +IK+ + H+GS ++D+YAKC G + +VF I +
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKC-GRLDLACRVFNRITE 424
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GK 353
D + WN+MI+ SQ +A+ F+++ G D S +SAC+NL P+L GK
Sbjct: 425 KDAICWNSMITSCSQNGR-PGEAINLFRQMGMEGTRYDCVSISGALSACANL-PALHYGK 482
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IH L IK +RS+ + ++L+ MY+KCGNL +RR+FDRM E N VS NS+I+ Y H
Sbjct: 483 EIHGLMIKGPLRSD-LYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNH 541
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G E L LF ML I P ++TF+ ++SAC H G+V EG +Y+ +M + +G EH
Sbjct: 542 GDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEH 601
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLE 516
Y+C+ D+ GRAG+L +A I +MPF P G++ L A+ H L+
Sbjct: 602 YACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLD 661
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P N+ YV+LAN+ A +GKW +V +R +M++RGV+K PG+SWIEV H+FVA DGSH
Sbjct: 662 PLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSH 721
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVP 600
P+ +I++ L+ + ++K+ GYVP
Sbjct: 722 PLTAQIYSVLDSLLLELKKEGYVP 745
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 240/493 (48%), Gaps = 28/493 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF + L+ YA ++ A+ LFD IPQ D V +N +++ Y GD+ +A+ +F +MR
Sbjct: 92 DVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR 151
Query: 124 EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ T + +++ AS L L QLH +A+ CG + + V N+LL YS+ L
Sbjct: 152 HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQ 211
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
A+++F + + D VSWN ++ Y Q+ EA LF+ M+S + D T AS L
Sbjct: 212 AARKLFDTLPQ-SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L L + H ++I+ + + S LID+Y KC D+ K + D V+
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR-DVEMAQKNLCQSSSFDTVVC 329
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
TMISGY + + +AL F+ L + P +F + A + L+ +LGK++H I
Sbjct: 330 TTMISGYVLNGK-NKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K ++ + V +A++ MY+KCG L+ A R+F+R+ E + + NSMI +Q+G EA+
Sbjct: 389 KTKL-DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM-KDMFGFEPEGEHYSCMID 479
LF M ++ LSACA+ + G++ +M K + E S +ID
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAE--SSLID 505
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
+ + G L + R+ F +++ N V + + + Y G +E
Sbjct: 506 MYAKCGNLNFSRRV------------------FDRMQEKNEVSWNSIISAYGNHGDLKEC 547
Query: 540 ATIRRLMRDRGVQ 552
+ M G+Q
Sbjct: 548 LALFHEMLRNGIQ 560
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 146/270 (54%), Gaps = 5/270 (1%)
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y R G L +AK +FY + ++ +WN M+ + + AL + +M+ + D YT
Sbjct: 2 YVRTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
++ A L+ + G H + G ++ +GS LI LYA+ +G + D +F+ I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE-NGHLSDAQYLFDNI 119
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLG 352
PQ D VLWN M++GY + + S A+ F ++ P+ +F CV+S C S LG
Sbjct: 120 PQKDSVLWNVMLNGYVKNGD-SGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
Q+H + + + + V N L+AMYSKC L+ AR+LFD +P+ + VS N +I+GY Q
Sbjct: 179 TQLHGIAVGCGLELDS-PVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVL 442
+G+ EA LF M+ I P +ITF S L
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFL 267
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 4/220 (1%)
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
+G ++D +F + WN MI G++ ++ + AL + K+ G PD +F
Sbjct: 5 TGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQF-NYALLFYLKMLGAGVSPDKYTFPY 63
Query: 340 VISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
V+ AC L S +GK +H T+ + + V ++L+ +Y++ G+L DA+ LFD +P+
Sbjct: 64 VVKACCGLKSVKMGKIVHE-TVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
++V N M+ GY ++G A+++F M + I P ++TF VLS CA + G +
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ G E + + ++ + + L A +L + +P
Sbjct: 183 GIAVGC-GLELDSPVANTLLAMYSKCQCLQAARKLFDTLP 221
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MY + G+L+DA+ LF + T + N MI G+ G AL + ML + P T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F V+ AC V G K ++ G + + S +I L G L+DA+ L + +
Sbjct: 61 FPYVVKACCGLKSVKMG-KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 498 P 498
P
Sbjct: 120 P 120
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/610 (34%), Positives = 322/610 (52%), Gaps = 73/610 (11%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYAS--VNNSLLTCYSRNGFLDEAKRVFYEMGEI-KDE 196
A ++L + ++LH I G ++N+LL Y+ G +A++VF E+ KD
Sbjct: 24 ARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKDT 83
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAH 256
V W +++ + +H EAL +F EM + D TL + L D+V G Q H
Sbjct: 84 VDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGC 143
Query: 257 LIKSGFHQNSHIGSGLIDLYAKC------------------------------SGDMRDC 286
++K G + ++D+YAK S +R+
Sbjct: 144 MVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNG 203
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
VF+E+P+ + V W MI+GY + + + + + + +++ACS
Sbjct: 204 RVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQ 263
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+G+ +HA +K + + I V A+V MY+KCG + A + F +MP+ N VS N+
Sbjct: 264 SGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNA 323
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
M++G A HG+G AL +F M + P ++TF SVLSAC+H+G V +G YF ++ ++
Sbjct: 324 MLSGLAMHGLGRAALDIFPQMFK-EAKPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVY 382
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-------------KAANHF 512
G P+ EHY+CM+DLLGRAG+L +AE L+ MP P + L + H
Sbjct: 383 GITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHL 442
Query: 513 LQ----LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
LQ L+P N +++L+N+YA +GK ++R++++ RG++K PG S I V Q+H
Sbjct: 443 LQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQ 502
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------------------DKEKRLV 607
F A D SHP +E++N L+EM +++ AGY P +KE+ L
Sbjct: 503 FSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQEEKEQALF 562
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLA+ FGL+ST G P+ + KNLRIC DCH+AIK +S I REI +RD RFHCFK
Sbjct: 563 SHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFK 622
Query: 668 DGRCSCGDYW 677
+G CSC DYW
Sbjct: 623 EGSCSCCDYW 632
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 217/493 (44%), Gaps = 98/493 (19%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFS--AYLSNHFILLYSKCGCLSAAHHAFNQ 59
+R +L++C L G+ LHA + + + +L N + Y+ CGC
Sbjct: 16 YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGC---------- 65
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQP--DLVSYNTLISAYADCGDTESALS 117
AR++FD+IP D V + TL+ + ++ AL
Sbjct: 66 ---------------------AWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALL 104
Query: 118 LFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+F +MR D TL L A ++ + Q H + G N+++ Y+
Sbjct: 105 IFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYA 164
Query: 176 RNGFLDEAKRVFYEM-----------------------GEI-------KDEVSWNSMVVA 205
++G + EA+RVFYEM G + ++EV+W M+
Sbjct: 165 KSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAG 224
Query: 206 YGQHREGLEALQLFQEMV-SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y E+ L +EM+ L++ L+ TL SILTA + DL+ G HA+ +K+ +
Sbjct: 225 YLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKE 284
Query: 265 -NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
N +G+ ++D+YAKC G + K F+++PQ ++V WN M+SG + AL F
Sbjct: 285 LNIMVGTAMVDMYAKC-GRIHIAFKFFKKMPQRNVVSWNAMLSGLAM-HGLGRAALDIFP 342
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSPSLGKQ----------IHALTIKIEIRSNRISVNN 373
++ + PDD +F V+SACS+ L Q ++ +T K+E +
Sbjct: 343 QMFKEA-KPDDVTFTSVLSACSH--SGLVDQGCFYFGNLESVYGITPKVEHYA------- 392
Query: 374 ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE--TN 430
+V + + G LE+A L MP N V L S++ + HG L+L E +L+
Sbjct: 393 CMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHG----KLQLGEHLLQELVQ 448
Query: 431 IPPTNITFVSVLS 443
+ P N + +LS
Sbjct: 449 LDPQNTEYHILLS 461
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 44/260 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T +L C DL+ G+ +HA LK + + + +Y+KCG + A F +
Sbjct: 253 TLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKK 312
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQI---PQPDLVSYNTLISAYADCGDTESAL 116
NV S+N +L+ A +A +F Q+ +PD V++ +++SA + G +
Sbjct: 313 MPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAKPDDVTFTSVLSACSHSGLVDQGC 372
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F ++ I +HYA + + L R
Sbjct: 373 FYFGNLES----------------------------VYGITPKVEHYACMVDLL----GR 400
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ--------LG 228
G L+EA+ + EM +EV S++ + H + L QE+V L L
Sbjct: 401 AGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILL 460
Query: 229 LDMYTLASILTAFTSLEDLV 248
+MY LA SL ++
Sbjct: 461 SNMYALAGKQNRANSLRQVL 480
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 361/679 (53%), Gaps = 61/679 (8%)
Query: 32 FSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQ-LFDQ 90
+S+ N I Y++ G L+ A F++T NV S+N L+ Y+ I A+ +FD+
Sbjct: 54 WSSSSWNSMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDE 113
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ 150
+P+ + VS+N L+SAYA G A S F+ M R D +T LI S N L +
Sbjct: 114 MPRREEVSWNALLSAYAQAGHVHLARSTFERM--PRHDVVAWT--ALIAVSGQNGQLEEA 169
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
+ D A +L+ Y NG L E+KRV+ M E ++ VS +M++AY Q+
Sbjct: 170 EVLYDLIPERDLVAWT--ALIQAYGVNGQLTESKRVYALMPE-RNRVSHTAMIIAYSQNG 226
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
E ++A ++M+ D T S++ A+ G ++ + S + + +
Sbjct: 227 EVVQA----RKMLDTLPDPDQSTRTSMIVAYAQ----NGYIKDAREMFDSIKNPDVIACN 278
Query: 271 GLIDLYAKCSGDMRDCMK-VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+++ Y+ S M D K +F+ I Q LV WNTM++ Y+Q D+A F +
Sbjct: 279 AMMEAYS--SAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNL-DEAKSIFDSIP--- 332
Query: 330 YHPDDCSF-VCVISACSNLSPSLGKQI-HALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
H + S V V++ N+ + ++I +++ K + A+VAM ++ G L +
Sbjct: 333 -HKNVVSHNVMVVAYAHNMDLAEARRIFYSMDEKDTV------TWTAMVAMLAQHGRLAE 385
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A+ LF +MP N VS NS+IAG A G GM A+R M P +ITF+ +L AC+H
Sbjct: 386 AQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSH 445
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----G 502
G V EG +F+ M+ G P EHY M+D+LGRAG+L A L+E MPF P G
Sbjct: 446 VGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWG 505
Query: 503 S------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
S + +AA LQ + ++ PYV+LAN+Y++ G+ + +R M+ RG
Sbjct: 506 SLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARG 565
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K+PG S I V +H FVA + SHP +EI + L + MK+AGY PD
Sbjct: 566 VKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSVL 625
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE L +HSEKLA+AF ++ G PI +MKNLR+C DCH A KF+S + REI VR
Sbjct: 626 DEEKEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVR 685
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D YRFH F++G CSCGDYW
Sbjct: 686 DGYRFHNFENGTCSCGDYW 704
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
+YS+ G+L A+ +FD++P HN VS NS+IAG++QHG A +F M + N
Sbjct: 3 VYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN-- 60
Query: 438 FVSVLSACAHTGKVAEGQKYF 458
S+++ A +G +A F
Sbjct: 61 --SMITGYAQSGDLAGATAMF 79
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 231/698 (33%), Positives = 352/698 (50%), Gaps = 103/698 (14%)
Query: 79 LRIASARQLFDQIPQPDLVSYNTLISAYADCG-DTESALSLFKDMREKRFDTDGFTLSGL 137
L + A LFD++P P ++T + A + G D LF+ MR DGFT L
Sbjct: 51 LHLRYALHLFDRMP-PSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFL 109
Query: 138 I-----TASSNNLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCYSRNGFLDEAKRVFYEM- 190
++ ++L L LH + A V+NSL+ Y R G +A+R F E+
Sbjct: 110 FKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIH 169
Query: 191 -----------------------------GEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
++D +SW S++ AY + EA+ F+
Sbjct: 170 VKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKT 229
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
M+S + D T+ ++L+A L+DL G H + + G + ++ LID+YAKC G
Sbjct: 230 MLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKC-G 288
Query: 282 DMRDCMKVFEEI---PQP-----------------------------DLVLWNTMISGYS 309
D +VF+ + P+P D++ +N+M++GY
Sbjct: 289 DFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYI 348
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNR 368
+ +AL F + R D+ + V +++AC++L G+ +HA I+ +
Sbjct: 349 HSGQLR-EALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHA-CIEQRLVEAD 406
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
I + AL+ MY KCG +++A +F RM + + + +MIAG A +G+G AL F M
Sbjct: 407 IYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRC 466
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
P ++++++VL+AC+H+ + EG+ YF M+ ++ P+ EHY CMIDLLGR+G L
Sbjct: 467 DGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLD 526
Query: 489 DAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYA 531
+A L++ MP P ++ A AA H L+LEP YV L NIY
Sbjct: 527 EAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYI 586
Query: 532 ASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSR 591
S +WE + IR LM +R V+K G+S I V Q+H FV D SHP I EI LEE+S
Sbjct: 587 DSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISH 646
Query: 592 KMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
++K GY P +KE+ L+ HSEKLA+AFGL++ + P+ + KNLR+C D
Sbjct: 647 RLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCED 706
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
CH+AIK IS + REI VRD RFH F++G CSC D+W
Sbjct: 707 CHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 205/430 (47%), Gaps = 40/430 (9%)
Query: 21 LHALYLKNLVPFSA-YLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQL 79
LHA L+ ++P +A ++SN I +Y + G + A AF++ + ++ +L++ A+
Sbjct: 128 LHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG 187
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
+ + L Q P D++S+ +LI+AY+ A+ FK M D T+ +++
Sbjct: 188 MLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLS 247
Query: 140 ASS--NNLCLIKQLHCLA-----------IYCGFDHYASVN------------------- 167
A + +L L + LH L + D YA
Sbjct: 248 ACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQ 307
Query: 168 --NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
N+++ Y ++G +D A+ +F EM E++D +++NSM+ Y + EAL LF M
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEM-EVRDIITFNSMMTGYIHSGQLREALLLFMSMRRH 366
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
L +D +T+ ++LTA SL L G HA + + + ++G+ L+D+Y KC G + +
Sbjct: 367 DLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKC-GRVDE 425
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF+ + + D+ W MI+G + AL F ++ G+ P+ S++ V++ACS
Sbjct: 426 ATIVFQRMGKRDVHTWTAMIAGLA-FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACS 484
Query: 346 NLSPSLGKQIHALTIKIEIRSN-RISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSL 403
+ +++ ++I + +I ++ + + G L++A L MP + N V
Sbjct: 485 HSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIW 544
Query: 404 NSMIAGYAQH 413
S+++ H
Sbjct: 545 ASILSACRVH 554
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 25/321 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C +DL G+SLH L + +P S L I +Y+KCG A F+
Sbjct: 241 TVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDAL 300
Query: 61 -QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ S+N ++ Y + + AR LFD++ D++++N++++ Y G AL LF
Sbjct: 301 GRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLF 360
Query: 120 KDMREKRFDTDGFTLSGLITASSN----------NLCLIKQLHCLAIYCGFDHYASVNNS 169
MR D FT+ L+TA ++ + C+ ++L IY G +
Sbjct: 361 MSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLG--------TA 412
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
LL Y + G +DEA VF MG+ +D +W +M+ + G AL+ F +M
Sbjct: 413 LLDMYMKCGRVDEATIVFQRMGK-RDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQP 471
Query: 230 DMYTLASILTAFTSLEDL-VGGLQFHAHLIKSGFH-QNSHIGSGLIDLYAKCSGDMRDCM 287
+ + ++LTA + L G L F I H Q H G +IDL + SG + + M
Sbjct: 472 NSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGC-MIDLLGR-SGLLDEAM 529
Query: 288 KVFEEIP-QPDLVLWNTMISG 307
+ + +P QP+ V+W +++S
Sbjct: 530 DLVKTMPIQPNAVIWASILSA 550
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 42/290 (14%)
Query: 252 QFHAHLIKSG---FHQNS--HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ HA L SG H S H+ + L++ +R + +F+ +P P L++T +
Sbjct: 17 ELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMP-PSTFLFDTALR 75
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSF----VCVISACSNLSPSLGKQIHALTIKI 362
S+ + F+++ R G PD +F C S+ S L +HA ++
Sbjct: 76 ACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRT 135
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRM--------------------------- 395
+ S V+N+L+ MY + G DARR FD +
Sbjct: 136 MLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLL 195
Query: 396 ----PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
P + +S S+IA Y++ EA+ F+ ML I P +T ++VLSACA +
Sbjct: 196 LSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDL 255
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
G+ ++++ G +ID+ + G A+++ +A+ P
Sbjct: 256 ELGRSLHLLVEEK-GMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGP 304
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/546 (36%), Positives = 314/546 (57%), Gaps = 41/546 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ + L++ Y + G+ ++A+R+F EM KD VSWNS++ L F M +
Sbjct: 99 IGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSLMSGLSGRGYLGACLNAFCRMRT- 156
Query: 226 QLGL--DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ G + TL S+++A + L G H ++K G + + + LI++Y K G +
Sbjct: 157 ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKL-GFL 215
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
++FEE+P LV WN+M+ ++ Y+++ + F + R G +PD + V ++ A
Sbjct: 216 DAASQLFEEMPVRSLVSWNSMVVIHNHNG-YAEKGMDLFNLMKRAGINPDQATMVALLRA 274
Query: 344 CSNLSPSLGKQ---IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
C++ LG+Q IHA + ++ I + AL+ +Y+K G L + +F+ + + +
Sbjct: 275 CTD--TGLGRQAESIHAYIHRCGFNAD-IIIATALLNLYAKLGRLNASEDIFEEIKDRDR 331
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
++ +M+AGYA H G EA++LF+ M++ + ++TF +LSAC+H+G V EG+KYF +
Sbjct: 332 IAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEI 391
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----------------- 503
M +++ EP +HYSCM+DLLGR+G+L DA LI++MP P S
Sbjct: 392 MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 451
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+ + A L L+PS+ Y+ML+NIY+A+G W + + +R LM++R + + PG S+IE
Sbjct: 452 LGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHG 511
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSE 611
++H FV D HP EIH LEE+ RK+++AG P E + HSE
Sbjct: 512 NKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSE 571
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLA+AFGLL T G P+++ KNLRICGDCH+ KF S + R I +RD+ RFH F DG C
Sbjct: 572 KLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLC 631
Query: 672 SCGDYW 677
SC DYW
Sbjct: 632 SCRDYW 637
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L GKSLH + +K + A + N I +Y K G L AA
Sbjct: 166 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA------- 218
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
QLF+++P LVS+N+++ + G E + LF
Sbjct: 219 ------------------------SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFN 254
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY---CGFDHYASVNNSLLTCYSRN 177
M+ + D T+ L+ A ++ L +Q + Y CGF+ + +LL Y++
Sbjct: 255 LMKRAGINPDQATMVALLRACTDT-GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 313
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L+ ++ +F E+ + +D ++W +M+ Y H G EA++LF MV + +D T +
Sbjct: 314 GRLNASEDIFEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHL 372
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP- 294
L+A S LV + + ++ + + S ++DL + SG + D ++ + +P
Sbjct: 373 LSA-CSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR-SGRLEDAYELIKSMPM 430
Query: 295 QPDLVLWNTMI 305
+P +W ++
Sbjct: 431 EPSSGVWGALL 441
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+A++ LL YA+ R+ ++ +F++I D +++ +++ YA A+ LF
Sbjct: 297 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDL 356
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG-------FDHYASVNNSLLTCY 174
M ++ + D T + L++A S++ + + I DHY+ + + L
Sbjct: 357 MVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLL---- 412
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQ 217
R+G L++A + M W +++ A YG G E +
Sbjct: 413 GRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAE 458
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 207/561 (36%), Positives = 315/561 (56%), Gaps = 38/561 (6%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLH I G +++ L+ YS+ + ++F++ K +W+S++ ++ Q+
Sbjct: 41 QLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPH-KSATTWSSVISSFAQN 99
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
L +L F+ M+ + D + S + L L H +K+ +H + +G
Sbjct: 100 DLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVG 159
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK--LNR 327
S +ID+YAKC GD+ VF+E+P ++V W+ +I GY Q E D++L FK+ +
Sbjct: 160 SSVIDMYAKC-GDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGE-DDESLRLFKRFLVEE 217
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+D + V+ C + +G+ IH L+ K S+ V ++L+++YSKCG +E
Sbjct: 218 ENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCF-VASSLISLYSKCGVVE 276
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN-ITFVSVLSAC 445
+A +F+ + N N+M+ AQH + LF+ M N ITF+ VL AC
Sbjct: 277 EAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYAC 336
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-- 503
+H G V +G+ YF +MKD +G EP +HYS M+DLLGRAGKL DA +LIE MP P
Sbjct: 337 SHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESV 395
Query: 504 ---------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
+A A+ +L ++ +VML+N YAA+G+WEE A R++MRD
Sbjct: 396 WGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRD 455
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
RG++K+ G SW+E ++H F A D SH EI++ L+E+ +M +AGYV D
Sbjct: 456 RGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKE 515
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
K + + +HSE+LA+AFG ++ +G+PI VMKNLR+CGDCH AIKFIS GR I
Sbjct: 516 VDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVII 575
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRD RFH F+DG+C+CGDYW
Sbjct: 576 VRDNNRFHRFEDGKCTCGDYW 596
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 202/460 (43%), Gaps = 47/460 (10%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
R L G LHA +K + LS+H I YSK ++ F+ + H + +++ ++
Sbjct: 34 RSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVI 93
Query: 73 AAYARQ----LRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
+++A+ L + R + Q PD + SA CG
Sbjct: 94 SSFAQNDLPLLSLNYFRLMLRQGVPPD---DHIFPSATKSCG------------------ 132
Query: 129 TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
LS L A K LHC A+ + V +S++ Y++ G + A VF
Sbjct: 133 ----ILSSLPVA--------KMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ--LGLDMYTLASILTAFTSLED 246
EM ++ VSW+ ++ Y Q E E+L+LF+ + + G++ +TL+S+L
Sbjct: 181 EM-PYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTL 239
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G H K+ F + + S LI LY+KC G + + VFEE+ +L +WN M+
Sbjct: 240 LQMGRLIHGLSFKTSFDSSCFVASSLISLYSKC-GVVEEAYDVFEEVTVRNLGMWNAMLI 298
Query: 307 GYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEI 364
+Q ++D+ F K+ V G + +F+CV+ ACS+ GK L I
Sbjct: 299 ACAQ-HAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGI 357
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLF 423
+ +V + + G L DA +L + MP T S+ +++ G HG A +
Sbjct: 358 EPGTQHYST-MVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVA 416
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+ + E + + V + +A A G+ E K MM+D
Sbjct: 417 DRVSELGSVSSGL-HVMLSNAYAAAGRWEEAAKARKMMRD 455
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 6/216 (2%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L + L + T L GLQ HAH+IK G + LI+ Y+K +++F +
Sbjct: 23 LCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSS-LQIFHDS 81
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
P W+++IS ++Q + +L F+ + R G PDD F +C LS +
Sbjct: 82 PHKSATTWSSVISSFAQN-DLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVA 140
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
K +H +K + I V ++++ MY+KCG++ A +FD MP N VS + +I GY Q
Sbjct: 141 KMLHCFALKTAYHLD-IFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQ 199
Query: 413 HGIGMEALRLFEWML--ETNIPPTNITFVSVLSACA 446
G E+LRLF+ L E N + T SVL C
Sbjct: 200 LGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCG 235
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 41/313 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F K+C L K LH LK ++ + I +Y+KCG + AH+ F++
Sbjct: 124 FPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMP 183
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+ NV VS++ LI Y G+ + +L LFK
Sbjct: 184 YRNV-------------------------------VSWSGLIYGYVQLGEDDESLRLFKR 212
Query: 122 --MREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ E+ + FTLS + + S L + + +H L+ FD V +SL++ YS+
Sbjct: 213 FLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKC 272
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL-QLGLDMYTLAS 236
G ++EA VF E+ +++ WN+M++A QH + +LF +M S+ + + T
Sbjct: 273 GVVEEAYDVFEEV-TVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLC 331
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L A S LV +++ L+K G + S ++DL + +G + D +K+ EE+P
Sbjct: 332 VLYA-CSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGR-AGKLNDAVKLIEEMPM 389
Query: 295 QPDLVLWNTMISG 307
+P +W +++G
Sbjct: 390 EPTESVWGALLTG 402
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G+ +H L K S ++++ I LYSKCG + A+ F +
Sbjct: 226 TLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEV 285
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-----QPDLVSYNTLISAYADCGDTESA 115
N+ +N +L A A+ +LFD++ + + +++ ++ A + G E
Sbjct: 286 TVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKG 345
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F+ M++ I G HY+++ + L
Sbjct: 346 KYYFELMKD-----------------------------YGIEPGTQHYSTMVDLL----G 372
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
R G L++A ++ EM E W +++
Sbjct: 373 RAGKLNDAVKLIEEMPMEPTESVWGALLTG 402
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 316/544 (58%), Gaps = 34/544 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K H I + ++ N L+ YS+ GF++ A++VF M E + VSWN+M+ Y +
Sbjct: 73 KACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE-RSLVSWNTMIGLYTR 131
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+R EAL +F EM + +T++S+L+A D + + H +K+ N ++
Sbjct: 132 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 191
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ L+DLYAKC G ++D ++VFE + V W++M++GY Q + Y ++AL +++ R+
Sbjct: 192 GTALLDLYAKC-GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY-EEALLLYRRAQRM 249
Query: 329 GYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
+ + VI ACSNL+ + GKQ+HA+ K SN + V ++ V MY+KCG+L +
Sbjct: 250 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN-VFVASSAVDMYAKCGSLRE 308
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ +F + E N N++I+G+A+H E + LFE M + + P +TF S+LS C H
Sbjct: 309 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 368
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS---- 503
TG V EG+++F +M+ +G P HYSCM+D+LGRAG L++A LI+++PF+P +
Sbjct: 369 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWG 428
Query: 504 -------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
+A AA +LEP NA +V+L+NIYAA+ +WEE+A R+L+RD
Sbjct: 429 SLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCD 488
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V+K G SWI++K ++H F + HP I+EI + L+ + K ++ GY P
Sbjct: 489 VKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVE 548
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE+ L+ HSEKLA+ FGL+ P+ +MKNLRIC DCH +K S R I VR
Sbjct: 549 IGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVR 608
Query: 659 DTYR 662
D R
Sbjct: 609 DVNR 612
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D + K LH L +K + + Y+ + LY+KCG + A F
Sbjct: 156 TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 215
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q + V+++++++ Y + E AL L++
Sbjct: 216 QDKSS-------------------------------VTWSSMVAGYVQNKNYEEALLLYR 244
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + FTLS +I A SN LI KQ+H + GF V +S + Y++ G
Sbjct: 245 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 304
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L E+ +F E+ E E+ WN+++ + +H E + LF++M + + T +S+L
Sbjct: 305 SLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 363
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+ + G +F + + G N S ++D+ + +G + + ++ + IP P
Sbjct: 364 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR-AGLLSEAYELIKSIPFDP 422
Query: 297 DLVLWNTMIS 306
+W ++++
Sbjct: 423 TASIWGSLLA 432
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 214/609 (35%), Positives = 312/609 (51%), Gaps = 82/609 (13%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLT-CYSRN-GFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+KQ+H I G + N +L+ C SR G + A+++F + E SWN M
Sbjct: 30 LKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPE-PSVFSWNIMFKG 88
Query: 206 YGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN 265
Y + + L+ EM+ + D YT + FT L G + H H++K G N
Sbjct: 89 YSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSN 148
Query: 266 SHIGSGLIDLYAKC---------------------------------------------- 279
+ LI++Y+ C
Sbjct: 149 VFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFV 208
Query: 280 -SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
+G + K F ++P+ D V W MI GY + Y +AL F+++ PD+ + V
Sbjct: 209 NTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYK-EALMLFREMQTSKIKPDEFTMV 267
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
V++AC+ L LG+ I K +++ N V NAL+ MY KCGN+E A +F+ +P+
Sbjct: 268 SVLTACAQLGALELGEWIRTYIDKNKVK-NDTFVGNALIDMYFKCGNVEMALSIFNTLPQ 326
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ + +M+ G A +G G EAL +F ML+ ++ P +T+V VLSAC HTG V EG+K+
Sbjct: 327 RDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKF 386
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI------------- 504
F+ M G EP HY CM+DLLG+AG L +A +I+ MP P SI
Sbjct: 387 FASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHK 446
Query: 505 ----ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
A +A L+LEP+N YV+ NIYAA KW+++ +R++M DRG++K PG S I
Sbjct: 447 DAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLI 506
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVH 608
E+ +H FVA D SHP KEI+ L +M+ +K AGY P DKE +
Sbjct: 507 EMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYR 566
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLA+AFGL+++ G I ++KNLR+C DCH+ K +S + RE+ VRD RFH F+
Sbjct: 567 HSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRH 626
Query: 669 GRCSCGDYW 677
G CSC DYW
Sbjct: 627 GSCSCKDYW 635
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 195/426 (45%), Gaps = 61/426 (14%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
ARQLFD IP+P + S+N + Y+ + +SL+ +M E+ D +T L +
Sbjct: 67 ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR 126
Query: 144 NLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L ++LHC + G D +N+L+ YS G +D A+ +F +M D V+WN+
Sbjct: 127 SVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIF-DMSCKSDVVTWNA 185
Query: 202 MVVAYGQHREGL------------------------------------------------ 213
M+ Y + ++ +
Sbjct: 186 MISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYK 245
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EAL LF+EM + ++ D +T+ S+LTA L L G ++ K+ ++ +G+ LI
Sbjct: 246 EALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALI 305
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
D+Y KC G++ + +F +PQ D W M+ G + ++AL F ++ + PD
Sbjct: 306 DMYFKC-GNVEMALSIFNTLPQRDKFTWTAMVVGLAI-NGCGEEALNMFSQMLKASVTPD 363
Query: 334 DCSFVCVISACSNLS-PSLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
+ ++V V+SAC++ GK+ A +T + I N I+ +V + K G+L++A +
Sbjct: 364 EVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPN-IAHYGCMVDLLGKAGHLKEAHEI 422
Query: 392 FDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV---SVLSACAH 447
MP + N++ +++ H A R E +LE P +V ++ +AC
Sbjct: 423 IKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELE-PNNGAVYVLQCNIYAACNK 481
Query: 448 TGKVAE 453
K+ E
Sbjct: 482 WDKLRE 487
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 35/266 (13%)
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS---GDMRDCMKVFEEIP 294
L+ F + + + Q H+ IK+G N I + ++ CS GDM ++F+ IP
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFC--CSREFGDMCYARQLFDTIP 75
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGK 353
+P + WN M GYS + + + ++ PD ++ + + +++ LG+
Sbjct: 76 EPSVFSWNIMFKGYS-RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGR 134
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
++H +K + SN + +NAL+ MYS CG ++ AR +FD + + V+ N+MI+GY +
Sbjct: 135 ELHCHVVKYGLDSN-VFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR- 192
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
I I++ ++++ +TG+V +KYF M PE +H
Sbjct: 193 -----------------IKKDVISWTAIVTGFVNTGQVDAARKYFHKM-------PERDH 228
Query: 474 --YSCMIDLLGRAGKLTDAERLIEAM 497
++ MID R +A L M
Sbjct: 229 VSWTAMIDGYLRLNCYKEALMLFREM 254
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 86/233 (36%), Gaps = 42/233 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L G+ + KN V ++ N I +Y KCG
Sbjct: 265 TMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCG------------ 312
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A +F+ +PQ D ++ ++ A G E AL++F
Sbjct: 313 -------------------NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFS 353
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLA-------IYCGFDHYASVNNSLLTC 173
M + D T G+++A ++ + + A I HY + + L
Sbjct: 354 QMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLL--- 410
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+ G L EA + M + + W +++ A H++ A + ++++ L+
Sbjct: 411 -GKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELE 462
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 333/611 (54%), Gaps = 84/611 (13%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD--EAKRVFYEMGEIKDEVSWNSMVVA 205
+KQ+H + G H ++ +L + + F D A VF ++ E ++ +WN+++ A
Sbjct: 31 LKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPE-RNCFAWNTVIRA 89
Query: 206 YGQHREG-LEALQLFQEMVS-LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
+ ++ L+AL +F +M+S + + +T S+L A + L G Q H L+K G
Sbjct: 90 LAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLV 149
Query: 264 QNSHIGSGLIDLYAKCS------------------------------------------- 280
+ + + L+ +Y C
Sbjct: 150 DDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGY 209
Query: 281 ---GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCS 336
G+++ ++F+ + Q +V WN MISGY+Q Y +A+ F ++ ++G P+ +
Sbjct: 210 ARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK-EAIEIFHRMMQMGDVLPNRVT 268
Query: 337 FVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V V+ A S L LGK +H K +IR + + + +ALV MY+KCG++E A ++F+R+
Sbjct: 269 LVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDV-LGSALVDMYAKCGSIEKAIQVFERL 327
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
P++N ++ N++I G A HG + M + I P+++T++++LSAC+H G V EG+
Sbjct: 328 PQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGR 387
Query: 456 KYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------ 503
+F+ M + G +P+ EHY CM+DLLGRAG L +AE LI MP P
Sbjct: 388 SFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKM 447
Query: 504 -----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFS 558
I ++AA +Q+ P ++ YV L+N+YA+SG W+ VA +R +M+D ++K PG S
Sbjct: 448 HKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCS 507
Query: 559 WIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRL 606
WIE+ +H F+ ED SH K+IH+ LEE+S K+ G++PD KE L
Sbjct: 508 WIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVL 567
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
+HSEK+AVAFGL+ST P+ ++KNLRIC DCH+++K IS + R+I +RD RFH F
Sbjct: 568 HYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRFHHF 627
Query: 667 KDGRCSCGDYW 677
+ G CSC DYW
Sbjct: 628 EHGSCSCMDYW 638
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 201/472 (42%), Gaps = 70/472 (14%)
Query: 55 HAF----NQTQHANVFSFNVLLAAYARQLR-IASARQLFDQIPQPDLVSYNTLISAYADC 109
HAF QT H N + +L + R I A +FDQ+P+ + ++NT+I A A+
Sbjct: 35 HAFLVKTGQT-HDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAET 93
Query: 110 GDTE-SALSLFKDM-REKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGF--DHY 163
D AL +F M E + + FT ++ A + L KQ+H L + G D +
Sbjct: 94 QDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEF 153
Query: 164 ASVN---------------------------------------------NSLLTCYSRNG 178
N N ++ Y+R G
Sbjct: 154 VVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVG 213
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASI 237
L A+ +F M + + VSWN M+ Y Q+ EA+++F M+ + L + TL S+
Sbjct: 214 NLKAARELFDRMAQ-RSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSV 272
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A + L L G H + K+ + +GS L+D+YAKC G + ++VFE +PQ +
Sbjct: 273 LPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKC-GSIEKAIQVFERLPQNN 331
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
++ WN +I G + + +D ++ + G P D +++ ++SACS+ G+
Sbjct: 332 VITWNAVIGGLAMHGKAND-IFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFF 390
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH-- 413
+ +I +V + + G LE+A L MP + + V +++ H
Sbjct: 391 NDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKN 450
Query: 414 -GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
IGM A + M P + +V++ + A +G MMKDM
Sbjct: 451 IKIGMRAAEVLMQM----APHDSGAYVALSNMYASSGNWDGVAAVRLMMKDM 498
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF--- 57
TF VLK C L GK +H L LK + ++ + + +Y CG + A+ F
Sbjct: 119 TFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRN 178
Query: 58 -------------NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLIS 104
+ + NV NV++ YAR + +AR+LFD++ Q +VS+N +IS
Sbjct: 179 VEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMIS 238
Query: 105 AYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA 164
YA G + A+ +F M + G L +T S L I +L L + YA
Sbjct: 239 GYAQNGFYKEAIEIFHRMMQM-----GDVLPNRVTLVS-VLPAISRLGVLELGKWVHLYA 292
Query: 165 SVN---------NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
N ++L+ Y++ G +++A +VF + + + ++WN+++ H + +
Sbjct: 293 EKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQ-NNVITWNAVIGGLAMHGKANDI 351
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLID 274
M + T +IL+A + + G F ++ S G ++D
Sbjct: 352 FNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVD 411
Query: 275 LYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
L + +G + + ++ +P +PD V+W ++
Sbjct: 412 LLGR-AGYLEEAEELILNMPMKPDDVIWKALLGA 444
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 325 LNRVGYHPDDCSF-----VCVISACSNLSPSLGKQIHALTIKI-EIRSNRISVNNALVAM 378
+N + + P+ S+ V I AC ++ KQ+HA +K + N I+ ++
Sbjct: 1 MNALMFQPNTASYYPRLDVPQIKACKSMREL--KQVHAFLVKTGQTHDNAIATEILRLSA 58
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ-HGIGMEALRLFEWML-ETNIPPTNI 436
S ++ A +FD++PE N + N++I A+ ++AL +F ML E + P
Sbjct: 59 TSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQF 118
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
TF SVL ACA ++AEG++ ++ FG + + ++ + G + DA L
Sbjct: 119 TFPSVLKACAVMARLAEGKQVHGLLLK-FGLVDDEFVVTNLLRMYVMCGSMEDANVL 174
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 339/634 (53%), Gaps = 37/634 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N LL YA R A +F Q+P DL+S+N+L++++ + G + AL L M
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ T + + A + + + LH L + G + + N+L++ Y + G + E++RV
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
+M +D V+WN+++ Y + + +AL FQ M + + T+ S+L+A D
Sbjct: 403 LLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 247 LVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
L+ G HA+++ +GF + H+ + LI +YAKC GD+ +F + +++ WN M+
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC-GDLSSSQDLFNGLDNRNIITWNAML 520
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
+ + + ++ L K+ G D SF +SA + L+ G+Q+H L +K+
Sbjct: 521 AANAH-HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 579
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+ + NA MYSKCG + + ++ + S N +I+ +HG E F
Sbjct: 580 EHDSF-IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
MLE I P ++TFVS+L+AC+H G V +G Y+ M+ FG EP EH C+IDLLGR+
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 485 GKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNAVPYVMLA 527
G+L +AE I MP P + KAA + +LEP + YV+ +
Sbjct: 699 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 758
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N++A +G+WE+V +R+ M + ++KK SW+++K ++ F D +HP EI+ LE
Sbjct: 759 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 818
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ + +K++GYV D KE L +HSE+LA+A+ L+ST G + + KNLR
Sbjct: 819 DIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLR 878
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
IC DCH+ KF+S + GR I +RD YRFH F+ G
Sbjct: 879 ICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 231/470 (49%), Gaps = 20/470 (4%)
Query: 38 NHFILLYSKCGCL---SAAHHAFNQTQHANVFSF----NVLLAAYARQLRIASARQLFDQ 90
N L+ S CG L S Q + + S N L++ + A +FDQ
Sbjct: 144 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ 203
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLI 148
+ + D +S+N++ +AYA G E + +F MR + + T+S L++ ++
Sbjct: 204 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 263
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+ +H L + GFD V N+LL Y+ G EA VF +M KD +SWNS++ ++
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM-PTKDLISWNSLMASFVN 322
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
L+AL L M+S ++ T S L A + + G H ++ SG N I
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
G+ L+ +Y K G+M + +V ++P+ D+V WN +I GY++ E+ D+AL F+ +
Sbjct: 383 GNALVSMYGKI-GEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-PDKALAAFQTMRVE 440
Query: 329 GYHPDDCSFVCVISACSNLSPS----LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G + + V V+SAC L P GK +HA + S+ V N+L+ MY+KCG+
Sbjct: 441 GVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMYAKCGD 497
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L ++ LF+ + N ++ N+M+A A HG G E L+L M + +F LSA
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
A + EGQ+ + + GFE + ++ D+ + G++ + +++
Sbjct: 558 AAKLAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 165/311 (53%), Gaps = 12/311 (3%)
Query: 193 IKDEVSWNSM---VVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV- 248
+++EVSWN+M +V G + EG+E F++M L + + +AS++TA +
Sbjct: 3 VRNEVSWNTMMSGIVRVGLYLEGME---FFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G+Q H + KSG + ++ + ++ LY G + KVFEE+P ++V W +++ GY
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYG-VYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN 367
S K E ++ + +K + G ++ S VIS+C L SLG+QI +K + S
Sbjct: 119 SDKGE-PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES- 176
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+++V N+L++M GN++ A +FD+M E +T+S NS+ A YAQ+G E+ R+F M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ + T ++LS H G+ ++ M GF+ + ++ + AG+
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM-GFDSVVCVCNTLLRMYAGAGRS 295
Query: 488 TDAERLIEAMP 498
+A + + MP
Sbjct: 296 VEANLVFKQMP 306
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 200/417 (47%), Gaps = 19/417 (4%)
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK- 149
+P + VS+NT++S G + F+ M + F ++ L+TA + + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 150 --QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
Q+H G V+ ++L Y G + +++VF EM + ++ VSW S++V Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYS 119
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
E E + +++ M +G + +++ ++++ L+D G Q ++KSG
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + LI + G++ +F+++ + D + WN++ + Y+Q + +++ F + R
Sbjct: 180 VENSLISMLGSM-GNVDYANYIFDQMSERDTISWNSIAAAYAQNG-HIEESFRIFSLMRR 237
Query: 328 VGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
+ + ++S ++ G+ IH L +K+ S + V N L+ MY+ G
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVCNTLLRMYAGAGRSV 296
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC- 445
+A +F +MP + +S NS++A + G ++AL L M+ + +TF S L+AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 446 ----AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
G++ G ++ +F + G + ++ + G+ G+++++ R++ MP
Sbjct: 357 TPDFFEKGRILHG---LVVVSGLFYNQIIG---NALVSMYGKIGEMSESRRVLLQMP 407
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 1 TFRQVLKTCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T VL C+ DL+ GK LHA + ++ N I +Y+KCG LS++ FN
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ N+ ++N +LAA A G E L L
Sbjct: 508 LDNRNIITWNAMLAANAHH-------------------------------GHGEEVLKLV 536
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
MR D F+ S ++A++ L +QLH LA+ GF+H + + N+ YS+
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G + E ++ + SWN ++ A G+H E F EM+ + + T S+
Sbjct: 597 GEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 238 LTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
LTA + + GL ++ + + G +IDL + SG + + ++P +
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR-SGRLAEAETFISKMPMK 714
Query: 296 PDLVLWNTMIS 306
P+ ++W ++++
Sbjct: 715 PNDLVWRSLLA 725
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/502 (39%), Positives = 285/502 (56%), Gaps = 37/502 (7%)
Query: 210 REGLEA--LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
R GL A L ++ +++ L + S+ A L L G+ HAH + GF +
Sbjct: 85 RRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGVHAHAVLLGFGSDRF 144
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + L+ LY+KC G + K+F+ I +V WN MISGY Q + +A+ ++++
Sbjct: 145 VQTALVVLYSKC-GKLDVARKLFDAIRDRSVVAWNAMISGYEQNG-LAGRAIEVYREMRV 202
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G PD +FV +SAC+ LG ++ L + + N + + ALV MY++CG +
Sbjct: 203 AGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMN-VVLGAALVNMYARCGLVN 261
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
AR FD + E N V+ SMIAGY HG G EA++LF+ M + PP ++TFV+VLSACA
Sbjct: 262 KAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACA 321
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI-EAMPFNPG--- 502
H G V++G+ F+ MK ++G P EHY M+D+ GRAG L DA + I +++P PG
Sbjct: 322 HAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIHDSIPGEPGPEV 381
Query: 503 --------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
S+ ++ A + LEP N V+L+NIYA SGK V +R M
Sbjct: 382 WTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNTMIK 441
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEK---- 604
R ++K G+S IE+ HVF + SHP EI+ YLE++ ++ AGY+P+ +
Sbjct: 442 RRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKLIHRITDAGYMPETDSVLHE 501
Query: 605 --------RLVHHSEKLAVAFGLLSTSY-GEPILVMKNLRICGDCHNAIKFISAIAGREI 655
L +H EKLAVAFGL+ TS PI ++KNLRICGDCH AIK++SA+ REI
Sbjct: 502 LEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRICGDCHLAIKYMSAVENREI 561
Query: 656 TVRDTYRFHCFKDGRCSCGDYW 677
VRD +RFH FK G+CSC +YW
Sbjct: 562 IVRDMHRFHHFKAGKCSCQEYW 583
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 167/389 (42%), Gaps = 48/389 (12%)
Query: 6 LKTCVGRRDLVTGK-SLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L RR L + + L +PFS++ F + C LSA HA
Sbjct: 79 LTRAAARRGLPAAALAFYRRLLAAALPFSSFA---FTSVAKACADLSALRAGMGVHAHAV 135
Query: 65 VFSF-------NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
+ F L+ Y++ ++ AR+LFD I +V++N +IS Y G A+
Sbjct: 136 LLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIE 195
Query: 118 LFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
++++MR D T ++ A + L L ++ L + + + +L+ Y+
Sbjct: 196 VYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYA 255
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
R G +++A R +++M + ++ V+W SM+ YG H G EA++LF M + T
Sbjct: 256 RCGLVNKA-REWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFV 314
Query: 236 SILT-------------AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
++L+ AF S++ + G L+ H S ++D+Y + +G
Sbjct: 315 AVLSACAHAGLVSDGRDAFASMKSVYG-------LVPRAEHYCS-----MVDMYGR-AGL 361
Query: 283 MRDCMK-VFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
+ D M+ + + IP +P +W M+ + +S LG + P++ S +
Sbjct: 362 LDDAMQFIHDSIPGEPGPEVWTAMLGACKMHKNFS---LGVEVAERLIALEPENPSHRVL 418
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRI 369
+S LS GK H ++ + R+
Sbjct: 419 LSNIYALS---GKMNHVEKVRNTMIKRRL 444
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 39/232 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L G + L + + + L + +Y++CG ++ A F+
Sbjct: 211 TFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYARCGLVNKAREWFDML 270
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFD----QIPQPDLVSYNTLISAYADCGDTESAL 116
Q NV ++ ++A Y A +LFD Q P P+ V++ ++SA A G
Sbjct: 271 QERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACAHAGLVSDGR 330
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+ ++ GL+ + + YC S++ Y R
Sbjct: 331 DAFASMK---------SVYGLVPRAEH-------------YC----------SMVDMYGR 358
Query: 177 NGFLDEAKRVFYEM--GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LD+A + ++ GE EV W +M+ A H+ +++ + +++L+
Sbjct: 359 AGLLDDAMQFIHDSIPGEPGPEV-WTAMLGACKMHKNFSLGVEVAERLIALE 409
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 291/515 (56%), Gaps = 35/515 (6%)
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
D ++S+ H + A+ ++ ++S L +T ++ A L L G H
Sbjct: 69 DSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAIH 128
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
AH I GF + + + L+ LY+KC G + K+F+ I +V WN MISGY Q
Sbjct: 129 AHSILLGFGSDRFVLTALVVLYSKC-GQLGVARKLFDAIRDRSVVAWNAMISGYEQNG-L 186
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+++ +G +K++ PD +FV +SAC+ LG+++ + E + + +
Sbjct: 187 AERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVS-ERMDISVFLGS 245
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV MY++CG ++ ARR FD + E N V+ SMIAGY HG G EA++LF M PP
Sbjct: 246 ALVNMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPP 305
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
++TFV+VLSACAH G V EG+ F+ MK ++G P EHY M+D+ GRAG L +A +
Sbjct: 306 NHVTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQF 365
Query: 494 I-EAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGK 535
I + MP PG ++ ++ A + LEP N +V+L+NIYA SGK
Sbjct: 366 ISDYMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGK 425
Query: 536 WEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
V +R M R ++K+ GFS IE+ H+F + SHP EI++YLEE+ ++
Sbjct: 426 MHHVEKVRNTMIKRRLKKQIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEELIHRITA 485
Query: 596 AGYVPDKEKRLV------------HHSEKLAVAFGL-LSTSYGEPILVMKNLRICGDCHN 642
AGY+P+ E L +HSEKLAVA+GL +S PI V+KNLRICGDCH
Sbjct: 486 AGYMPETESVLHELEEEEREGALRYHSEKLAVAYGLMMSVGSTTPIRVIKNLRICGDCHL 545
Query: 643 AIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
AIKF+SA+ REI VRD +RFH FKDG+CSC +YW
Sbjct: 546 AIKFMSAVENREIVVRDKHRFHHFKDGKCSCLEYW 580
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 147/309 (47%), Gaps = 7/309 (2%)
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK-- 149
P PD +++L A G +A++ ++ + FT + + A ++ L
Sbjct: 66 PAPDSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGA 125
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
+H +I GF V +L+ YS+ G L A+++F + + + V+WN+M+ Y Q+
Sbjct: 126 AIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRD-RSVVAWNAMISGYEQN 184
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+ +++EM + + D T + L+A L G + ++ + +G
Sbjct: 185 GLAERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLG 244
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
S L+++YA+C G + + F+ + + ++V W +MI+GY + +A+ F + G
Sbjct: 245 SALVNMYARC-GVVDKARRWFDALQERNVVTWTSMIAGYGM-HGHGREAIKLFHLMRCEG 302
Query: 330 YHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
P+ +FV V+SAC++ + G+ A ++ R+ ++V M+ + G L++A
Sbjct: 303 PPPNHVTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEA 362
Query: 389 RRLF-DRMP 396
+ D MP
Sbjct: 363 MQFISDYMP 371
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 164/376 (43%), Gaps = 48/376 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSA--YLSNHFILLYSKCGCLSAAHHAFN 58
TF V K C L TG ++HA + L+ F + ++ ++LYSKCG
Sbjct: 107 TFTAVAKACADLSALRTGAAIHAHSI--LLGFGSDRFVLTALVVLYSKCG---------- 154
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
++ AR+LFD I +V++N +IS Y G E + +
Sbjct: 155 ---------------------QLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGV 193
Query: 119 FKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+K+M+ + D T ++ A + L L +++ + D + ++L+ Y+R
Sbjct: 194 YKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYAR 253
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D+A+R F + E ++ V+W SM+ YG H G EA++LF M + T +
Sbjct: 254 CGVVDKARRWFDALQE-RNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVA 312
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE-IP 294
+L+A ++ G A + + G ++D++ + +G + + M+ + +P
Sbjct: 313 VLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGR-AGLLDEAMQFISDYMP 371
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
+P +W ++ + ++ LG + P++ S+ ++S LS GK
Sbjct: 372 GEPGPEVWTAVLGACKMHKNFN---LGVEVAERLIALEPENPSYHVLLSNIYALS---GK 425
Query: 354 QIHALTIKIEIRSNRI 369
H ++ + R+
Sbjct: 426 MHHVEKVRNTMIKRRL 441
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 225/711 (31%), Positives = 358/711 (50%), Gaps = 69/711 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R++ GK +H +K + ++N + +YSK GC+ + F
Sbjct: 278 TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLN 337
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT++ ++ GD L +
Sbjct: 338 NNKNV-------------------------------VSWNTMVGGFSAEGDIHGTFDLLR 366
Query: 121 DMREKRFDT--DGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M D D T+ + + L +K+LHC ++ F + + N+ + Y++
Sbjct: 367 QMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAK 426
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L A+RVF+ + K SWN+++ Y Q + +L +M + L D +T+ S
Sbjct: 427 CGSLSYAQRVFHGI-RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCS 485
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A + L+ L G + H +I++ ++ + ++ LY C G++ +F+ +
Sbjct: 486 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC-GELCTVQVLFDAMEDN 544
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
LV WNT+I+G+ Q + ++ALG F+++ G P S + V ACS L S LG++
Sbjct: 545 SLVSWNTVITGHLQNG-FPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREA 603
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA +K + N + +++ MY+K G + + ++F+ + E + S N+MI GY HG
Sbjct: 604 HAYALKHLLEDNAF-IACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGR 662
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA++LFE M T P ++TF+ VL+AC H+G + EG +Y MK FG +P +HY+
Sbjct: 663 AKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYA 722
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPS 518
C+ID+LGRAG+L +A R+ M P + K A LEP
Sbjct: 723 CVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPE 782
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
YV+L+N+YA GKW++V +R+ M++ ++K G SWIE+ ++ FV +
Sbjct: 783 KPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDG 842
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+EI + + K+ + GY PD K ++L HSEKLA+ +GL+ TS G
Sbjct: 843 FEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGT 902
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ V KNLRIC DCHNA K IS + REI VRD RFH F G CSCGDYW
Sbjct: 903 TLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 232/504 (46%), Gaps = 57/504 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C G D+ G ++H L +K + ++ N + Y H F
Sbjct: 189 TFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGT--------HGF--- 237
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ A +LFD +P+ +LVS+N++I ++D GD
Sbjct: 238 --------------------VSDALKLFDIMPERNLVSWNSMIRVFSDNGD--------- 268
Query: 121 DMREKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ F D T+ + + A + + K +H A+ D VNN+L+ YS+ G
Sbjct: 269 ---DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWG 325
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV--SLQLGLDMYTLAS 236
+ +++ +F ++ K+ VSWN+MV + + L ++M+ S + D T+ +
Sbjct: 326 CIIDSQMIF-KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILN 384
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ L + H + +K F + + + + YAKC G + +VF I
Sbjct: 385 AVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKC-GSLSYAQRVFHGIRSK 443
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
L WN +I GY+Q + +L ++ G PD+ + ++SACS L S LGK++
Sbjct: 444 TLNSWNALIGGYAQSSD-PRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEV 502
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H I+ + + + V +++++Y CG L + LFD M +++ VS N++I G+ Q+G
Sbjct: 503 HGFIIRNWLERD-LFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGF 561
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHY 474
AL LF M+ I P I+ ++V AC+ + G++ + +K + +
Sbjct: 562 PERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLL---EDNAFI 618
Query: 475 SC-MIDLLGRAGKLTDAERLIEAM 497
+C +ID+ + G +T + ++ +
Sbjct: 619 ACSIIDMYAKNGAITQSSKVFNGL 642
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 20/280 (7%)
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS-LQLG 228
++T Y+ G D+++ F + K+ WN+++ +Y ++ E L++F +M+S L
Sbjct: 126 IITMYAMCGSPDDSRSAFDAL-RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLL 184
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
D +T ++ A + D+ GL H ++K+G ++ +G+ L+ Y G + D +K
Sbjct: 185 PDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGT-HGFVSDALK 243
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+F+ +P+ +LV WN+MI +S + D A + PD + V V+ C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGD--DGA-----------FMPDVATVVTVLPVCARER 290
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+GK +H +K+ + + VNNAL+ MYSK G + D++ +F N VS N+M+
Sbjct: 291 EIGVGKGVHGWAVKLSL-DKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMV 349
Query: 408 AGYAQHGIGMEALRLFEWML--ETNIPPTNITFVSVLSAC 445
G++ G L ML ++ +T ++ + C
Sbjct: 350 GGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
L +L A +D+ G + H HL+ + + + +I +YA C G D F
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMC-GSPDDSRSAF 143
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP- 349
+ + +L WN +IS YS+ E Y + K +++ PD+ +F CVI AC+ +S
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDV 203
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G +H L +K + + + V NALV+ Y G + DA +LFD MPE N VS NSMI
Sbjct: 204 GIGLAVHGLVVKTGLVED-LFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRV 262
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
++ +G + P T V+VL CA ++ G+
Sbjct: 263 FSDNGD------------DGAFMPDVATVVTVLPVCAREREIGVGK 296
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 313/543 (57%), Gaps = 39/543 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VS 224
+ + L+TCY++ G+ ++A ++F +M KD VSWNS++ + + +L F M
Sbjct: 76 IGDQLVTCYNKLGYAEDALKLFDDMPH-KDLVSWNSLISGFSRCLH--MSLTAFYTMKFE 132
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + + T+ S+++A + D G H IK G + + LI++Y K SGD+
Sbjct: 133 MSVKPNEVTILSMISACSGALD--AGKYIHGFGIKVGGTLEVKVANSLINMYGK-SGDLT 189
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
++FE IP P+ V WN++I+ + + + F K+ R+G D+ + + ++ AC
Sbjct: 190 SACRLFEAIPDPNTVSWNSIIAA-QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQAC 248
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+L L + IH L + +I++ AL+ Y+K G L + +F + + V+
Sbjct: 249 LHLGVGKLAESIHGLMFCTGFGA-KITIATALLDTYAKLGRLSASYGVFTEVGFADRVAW 307
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+M+AGYA HG+G EA++LFE M + P ++TF +LSAC+H+G V EG+ YF++M +
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSE 367
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL-- 506
++G EP +HYSCM+DLLGR G L DA +I+ MP P G+I L
Sbjct: 368 VYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGK 427
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
+ A H + +EP + Y+ML+N+Y+AS W++ A +R L+++RG+++ PG+S IE +
Sbjct: 428 EVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKN 487
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H F D SHP ++I++ LEE+ K+++AGY KE + HSEKLA
Sbjct: 488 HHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLA 547
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGLL + GE +++ KNLRICGDCH+ K IS I R I +RD RFH F DG CSC
Sbjct: 548 IAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCA 607
Query: 675 DYW 677
DYW
Sbjct: 608 DYW 610
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 178/400 (44%), Gaps = 24/400 (6%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
C F + + F + L+ Y + A +LFD +P DLVS+N+LIS ++
Sbjct: 58 CREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR 117
Query: 109 CGDTESALSLFKDMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
C +L+ F M+ E + T+ +I+A S L K +H I G V
Sbjct: 118 C--LHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGIKVGGTLEVKVA 175
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSL+ Y ++G L A R+F + + + VSWNS++ A + E + F +M L +
Sbjct: 176 NSLINMYGKSGDLTSACRLFEAIPD-PNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 228 GLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
D T+ ++L A L VG L H + +GF I + L+D YAK G +
Sbjct: 235 EQDEGTILALLQACLHLG--VGKLAESIHGLMFCTGFGAKITIATALLDTYAKL-GRLSA 291
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF E+ D V W M++GY+ +A+ F+ + G PD +F ++SACS
Sbjct: 292 SYGVFTEVGFADRVAWTAMLAGYAA-HGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 346 NLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+ + GK + ++ R+ + +V + +CG L DA + MP +
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 405 SMIAG-------------YAQHGIGMEALRLFEWMLETNI 431
+ G A+H I ME L +++ +N+
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNM 450
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C+ +S+H L ++ + Y+K G LSA++ F +
Sbjct: 240 TILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEV 299
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
A+ ++ +LA YA A +LF+ + +PD V++ L+SA + G
Sbjct: 300 GFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGK 359
Query: 117 SLFKDMRE 124
S F M E
Sbjct: 360 SYFNVMSE 367
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/546 (36%), Positives = 313/546 (57%), Gaps = 41/546 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ + L++ Y + G+ ++A+R+F EM +D VSWNS++ L F M +
Sbjct: 176 IGDRLVSMYFKLGYDEDAQRLFDEMPN-RDLVSWNSLMSGLSGRGYLGACLNAFCRMRT- 233
Query: 226 QLGL--DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ G + TL S+++A + L G H ++K G + + + LI++Y K G +
Sbjct: 234 ESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKL-GFL 292
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
++FEE+P LV WN+M+ ++ Y+++ + F + R G +PD + V ++ A
Sbjct: 293 DAASQLFEEMPVRSLVSWNSMVVIHNHNG-YAEKGMDLFNLMKRAGINPDQATMVALLRA 351
Query: 344 CSNLSPSLGKQ---IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
C++ LG+Q IHA + ++ I + AL+ +Y+K G L + +F+ + + +T
Sbjct: 352 CTD--TGLGRQAESIHAYIHRCGFNAD-IIIATALLNLYAKLGRLNASEDIFEEIKDRDT 408
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
++ +M+AGYA H G EA++LF+ M++ + ++TF +LSAC+H+G V EG+KYF +
Sbjct: 409 IAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEI 468
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----------------- 503
M +++ EP +HYSCM+DLLGR+G+L DA LI++MP P S
Sbjct: 469 MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 528
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+ + A L L+PS+ Y+ML+NIY+A+G W + +R LM++R + + PG S+IE
Sbjct: 529 LGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHG 588
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSE 611
++H FV D HP EIH LEE+ RK+ +AG P E + HSE
Sbjct: 589 NKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSE 648
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLA+AFGLL T G P+++ KNLRICGDCH+ KF S + R I +RD+ RFH F DG C
Sbjct: 649 KLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLC 708
Query: 672 SCGDYW 677
SC DYW
Sbjct: 709 SCRDYW 714
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 130/247 (52%), Gaps = 6/247 (2%)
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
HA +IKS + + IG L+ +Y K D D ++F+E+P DLV WN+++SG S +
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYD-EDAQRLFDEMPNRDLVSWNSLMSGLSGR- 218
Query: 313 EYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS 370
Y L F ++ G P++ + + V+SAC+ + GK +H + +K+ + S +
Sbjct: 219 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGM-SGKAK 277
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N+L+ MY K G L+ A +LF+ MP + VS NSM+ + +G + + LF M
Sbjct: 278 VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 337
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P T V++L AC TG + + + + GF + + +++L + G+L +
Sbjct: 338 INPDQATMVALLRACTDTGLGRQAESIHAYIHRC-GFNADIIIATALLNLYAKLGRLNAS 396
Query: 491 ERLIEAM 497
E + E +
Sbjct: 397 EDIFEEI 403
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L GKSLH + +K + A + N I +Y K G L AA
Sbjct: 243 TLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA------- 295
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
QLF+++P LVS+N+++ + G E + LF
Sbjct: 296 ------------------------SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFN 331
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY---CGFDHYASVNNSLLTCYSRN 177
M+ + D T+ L+ A ++ L +Q + Y CGF+ + +LL Y++
Sbjct: 332 LMKRAGINPDQATMVALLRACTDT-GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 390
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L+ ++ +F E+ + +D ++W +M+ Y H G EA++LF MV + +D T +
Sbjct: 391 GRLNASEDIFEEIKD-RDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHL 449
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP- 294
L+A S LV + + ++ + + S ++DL + SG + D ++ + +P
Sbjct: 450 LSA-CSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR-SGRLEDAYELIKSMPM 507
Query: 295 QPDLVLWNTMI 305
+P +W ++
Sbjct: 508 EPSSGVWGALL 518
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+A++ LL YA+ R+ ++ +F++I D +++ +++ YA A+ LF
Sbjct: 374 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDL 433
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG-------FDHYASVNNSLLTCY 174
M ++ + D T + L++A S++ + + I DHY+ + + L
Sbjct: 434 MVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLL---- 489
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLD 230
R+G L++A + M W +++ A YG ++L +E+ L LD
Sbjct: 490 GRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN-------VELGKEVAEQLLSLD 541
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 349/640 (54%), Gaps = 72/640 (11%)
Query: 43 LYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
+Y KCG + A F +T + ++F +N ++ Y++ + A +LF ++P+ D VS+NT+
Sbjct: 158 MYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTM 217
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLH-------- 152
IS + G L+ F +M + F + T + +++A ++ +L LH
Sbjct: 218 ISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEP 277
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
CL +Y G L+ Y++ G L+ A++VF + E + VSW S++ Q
Sbjct: 278 CLDVYAGC--------GLIDMYAKCGRLESARQVFDGLTE-HNAVSWTSLIGGVAQAGFQ 328
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL LF +M + + D +TLA++L S +D+ G Q HAH I G + + + L
Sbjct: 329 EEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANAL 388
Query: 273 IDLYAKC------------------------------SGDMRDCMKVFEEIPQPDLVLWN 302
+ +YAKC +GD+ + F+++P+ +++ WN
Sbjct: 389 VTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWN 448
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIK 361
+M++ Y Q+ Y ++ L + ++ R G D +F ISAC++L+ LG QI A K
Sbjct: 449 SMLATYMQRG-YWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEK 507
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ SN +SV N++V MYS+CG +E+A+++F + N VS N+M+AGYAQ+G G + +
Sbjct: 508 LGFSSN-VSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIE 566
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLL 481
+FE ML P I++VSVLS C+H+G V+EGQ YF M G P EH+ CM+DLL
Sbjct: 567 IFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLL 626
Query: 482 GRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYV 524
GRAG+L A+ LI MPF P + +A A + L+L+ Y
Sbjct: 627 GRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYC 686
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHN 584
+LANIY+ SGK + V +R+LMRD+GV+K PG SWIEV ++HVF +D +HP IK++H
Sbjct: 687 LLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHR 746
Query: 585 YLEEMSRKMKQA---GYVPDKEKRLVHHSEKLAVAFGLLS 621
LEE+ +K+++ V + + +HSEKLAV L+S
Sbjct: 747 MLEEIIKKIEEIKNYANVMNSGRSHNYHSEKLAVPLRLIS 786
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 264/542 (48%), Gaps = 54/542 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F + +K C R + + LHA + + S +L NH + +YS CG +S A+ F
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV+S+N +++ +A ++ A +LF+++P+ D VS+N+++S Y G+ E+ +
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGS 126
Query: 122 MREKRFDTDGFTLSGLITASSNNL--CLIKQLHCLAIYCGFDHYAS------------VN 167
+ + L G + C+ + + I CG +A
Sbjct: 127 LGYLKL---ALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCW 183
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NS++ YS+ G + +A +F +M E +D VSWN+M+ QH G E L F EM +
Sbjct: 184 NSMIYGYSKYGSVKKALELFAKMPE-RDTVSWNTMISILSQHGFGAETLNTFLEMWNQGF 242
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ T AS+L+A TS+ DL G HA +++ + + G GLID+YAKC G +
Sbjct: 243 RPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKC-GRLESAR 301
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SN 346
+VF+ + + + V W ++I G +Q + ++AL F ++ V D + V+ C S
Sbjct: 302 QVFDGLTEHNAVSWTSLIGGVAQA-GFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKC------------------------ 382
S+G+Q+HA TI + S+ + V NALV MY+KC
Sbjct: 361 KDISIGEQLHAHTITRGLDSS-VPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAM 419
Query: 383 -------GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
G++E AR FD+MPE N +S NSM+A Y Q G E L+++ ML +
Sbjct: 420 ITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDW 479
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
ITF + +SACA + G + + + + GF + ++ + R G++ +A+++
Sbjct: 480 ITFSTSISACADLAVLILGNQILAQAEKL-GFSSNVSVANSVVTMYSRCGQIEEAQKMFS 538
Query: 496 AM 497
++
Sbjct: 539 SI 540
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 203/449 (45%), Gaps = 69/449 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL C DL G LHA ++ Y I +Y+KCG L +A
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA------- 300
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
RQ+FD + + + VS+ +LI A G E AL LF
Sbjct: 301 ------------------------RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFN 336
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY---- 174
MRE +D FTL+ ++ S ++ + +QLH I G D V N+L+T Y
Sbjct: 337 QMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCG 396
Query: 175 ---------------------------SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
S+ G +++A+ F +M E ++ +SWNSM+ Y
Sbjct: 397 DVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPE-RNVISWNSMLATYM 455
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
Q E L+++ +M+ + D T ++ ++A L L+ G Q A K GF N
Sbjct: 456 QRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVS 515
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + ++ +Y++C G + + K+F I +LV WN M++GY+Q + + + F+K+
Sbjct: 516 VANSVVTMYSRC-GQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQ-GRKVIEIFEKMLN 573
Query: 328 VGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNA-LVAMYSKCGNLE 386
+G PD S+V V+S CS+ Q + L++ + + +S + +V + + G LE
Sbjct: 574 IGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLE 633
Query: 387 DARRLFDRMP-EHNTVSLNSMIAGYAQHG 414
A+ L ++MP + N +++A HG
Sbjct: 634 QAKNLINQMPFKPNAAIWGALLAACRIHG 662
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/546 (36%), Positives = 314/546 (57%), Gaps = 41/546 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ + L++ Y + G+ ++A+R+F EM KD VSWNS++ L F M +
Sbjct: 156 IGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSLMSGLSGRGYLGACLNAFCRMRT- 213
Query: 226 QLGL--DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ G + TL S+++A + L G H ++K G + + + LI++Y K G +
Sbjct: 214 ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKL-GFL 272
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
++FEE+P LV WN+M+ ++ Y+++ + F + R G +PD + V ++ A
Sbjct: 273 DAASQLFEEMPVRSLVSWNSMVVIHNHNG-YAEKGMDLFNLMKRAGINPDQATMVALLRA 331
Query: 344 CSNLSPSLGKQ---IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
C++ LG+Q IHA + ++ I + AL+ +Y+K G L + +F+ + + +
Sbjct: 332 CTD--TGLGRQAESIHAYIHRCGFNAD-IIIATALLNLYAKLGRLNASEDIFEEIKDRDR 388
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
++ +M+AGYA H G EA++LF+ M++ + ++TF +LSAC+H+G V EG+KYF +
Sbjct: 389 IAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEI 448
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS----------------- 503
M +++ EP +HYSCM+DLLGR+G+L DA LI++MP P S
Sbjct: 449 MSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 508
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+ + A L L+PS+ Y+ML+NIY+A+G W + + +R LM++R + + PG S+IE
Sbjct: 509 LGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHG 568
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKE------------KRLVHHSE 611
++H FV D HP EIH LEE+ RK+++AG P E + HSE
Sbjct: 569 NKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSE 628
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
KLA+AFGLL T G P+++ KNLRICGDCH+ KF S + R I +RD+ RFH F DG C
Sbjct: 629 KLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLC 688
Query: 672 SCGDYW 677
SC DYW
Sbjct: 689 SCRDYW 694
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 139/266 (52%), Gaps = 6/266 (2%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ S++ A +S + HA +IKS + + IG L+ +Y K D D ++F+E+
Sbjct: 122 VQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYD-EDAQRLFDEM 180
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SL 351
P DLV WN+++SG S + Y L F ++ G P++ + + V+SAC+++
Sbjct: 181 PNKDLVSWNSLMSGLSGR-GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GK +H + +K+ + S + V N+L+ MY K G L+ A +LF+ MP + VS NSM+ +
Sbjct: 240 GKSLHGVVVKLGM-SGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 298
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
+G + + LF M I P T V++L AC TG + + + + GF +
Sbjct: 299 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC-GFNADI 357
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +++L + G+L +E + E +
Sbjct: 358 IIATALLNLYAKLGRLNASEDIFEEI 383
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L GKSLH + +K + A + N I +Y K G L AA
Sbjct: 223 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAAS------ 276
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
QLF+++P LVS+N+++ + G E + LF
Sbjct: 277 -------------------------QLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFN 311
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIY---CGFDHYASVNNSLLTCYSRN 177
M+ + D T+ L+ A ++ L +Q + Y CGF+ + +LL Y++
Sbjct: 312 LMKRAGINPDQATMVALLRACTDT-GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 370
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L+ ++ +F E+ + +D ++W +M+ Y H G EA++LF MV + +D T +
Sbjct: 371 GRLNASEDIFEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHL 429
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP- 294
L+A S LV + + ++ + + S ++DL + SG + D ++ + +P
Sbjct: 430 LSA-CSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR-SGRLEDAYELIKSMPM 487
Query: 295 QPDLVLWNTMI 305
+P +W ++
Sbjct: 488 EPSSGVWGALL 498
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+A++ LL YA+ R+ ++ +F++I D +++ +++ YA A+ LF
Sbjct: 354 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDL 413
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCG-------FDHYASVNNSLLTCY 174
M ++ + D T + L++A S++ + + I DHY+ + + L
Sbjct: 414 MVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLL---- 469
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA---YGQHREGLEALQLFQEMVSLQLGLD 230
R+G L++A + M W +++ A YG ++L +E+ L LD
Sbjct: 470 GRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN-------VELGKEVAEQLLSLD 521
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 322/587 (54%), Gaps = 53/587 (9%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+++ + L +Q+H +I G D S+ NSL Y ++G L+ R F + K+ ++W
Sbjct: 6 SAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD-KNVITW 64
Query: 200 NSMVVAYGQHREGLE-ALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+M+ + + L+ L LF +M+ + + +TL S+++ + D+ G Q A
Sbjct: 65 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCY 124
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD-- 316
K G N + + + LY + G+ + M++FEE+ ++ WN MISGY+Q + +
Sbjct: 125 KVGCEANLPVKNSTMYLYLR-KGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDD 183
Query: 317 --------QALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN 367
QAL F+ L R PD +F ++S CS + + G+QIHA TIK S+
Sbjct: 184 LHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSD 243
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ VN+ALV MY+KCG++E A + F MP V+ SMI+GY+QHG +A++LFE M+
Sbjct: 244 -VVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMV 302
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P ITFVS+LSAC++ G V E ++YF MM++ + EP +HY CM+D+ R G+L
Sbjct: 303 LSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRL 362
Query: 488 TDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIY 530
DA I+ F P +A AA+ L+L+P YV+L N+Y
Sbjct: 363 DDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMY 422
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
++G+W +VA +R+L + V SWI ++ +++ F A+D +HP E++ LE +
Sbjct: 423 ISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLL 482
Query: 591 RKMKQAGYVP--------------DKEKR-------LVHHSEKLAVAFGLLSTSYGEPIL 629
K K GY P D +K + HHSE+LAVA GLL T G +
Sbjct: 483 EKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVR 542
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
V KN+ +C DCH++IK+ S +A REI VRD+ R H FKDGRCSCGD+
Sbjct: 543 VTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 589
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 123/232 (53%), Gaps = 14/232 (6%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A ++ + G Q H + IK G + +G+ L LY K SGD+ ++ F+ P
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCK-SGDLESGLRAFKGTPDK 59
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQI 355
+++ W TMIS ++ E Y D L F + G P++ + V+S C + L SLGKQ+
Sbjct: 60 NVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQV 119
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ--- 412
A K+ +N + V N+ + +Y + G ++A RLF+ M + ++ N+MI+GYAQ
Sbjct: 120 QAFCYKVGCEAN-LPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMD 178
Query: 413 --------HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
G +AL+LF ++ + + P TF S+LS C+ + +G++
Sbjct: 179 SAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQ 230
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 142/324 (43%), Gaps = 52/324 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C R D+ GK + A K GC
Sbjct: 99 TLTSVMSLCGARLDMSLGKQVQAFCYK-------------------VGC----------- 128
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE------- 113
AN+ N + Y R+ A +LF+++ ++++N +IS YA D+
Sbjct: 129 -EANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHAR 187
Query: 114 ----SALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVN 167
AL LF+D+ D FT S +++ S + L + Q+H I G VN
Sbjct: 188 SRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVN 247
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ Y++ G ++ A + F EM + V+W SM+ Y QH +A+QLF++MV
Sbjct: 248 SALVNMYNKCGSIECATKAFVEM-PTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGA 306
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQN---SHIGSGLIDLYAKCSGDMR 284
+ T S+L+A S LV + + ++++ +H H G ++D++ + G +
Sbjct: 307 RPNEITFVSLLSA-CSYAGLVEEAERYFDMMRNEYHIEPLVDHYGC-MVDMFVRL-GRLD 363
Query: 285 DCMKVFEEIP-QPDLVLWNTMISG 307
D + +P+ +W+++++G
Sbjct: 364 DAFSFIKRTGFEPNEAIWSSLVAG 387
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 335/647 (51%), Gaps = 76/647 (11%)
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVS----YNTLISAYADCGDTESALSLFKDMR 123
F + L A A + RQ+ + L S N+L++ Y C D A +F
Sbjct: 13 FVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVF---- 68
Query: 124 EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
DG L +++ ++ +L Y++NG +A
Sbjct: 69 ------DGMLLRDVVSWTA---------------------------MLAVYAQNGCWSQA 95
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
VF M KD+VSWN+++ A + + +AL+LF M L + +TL S+L A
Sbjct: 96 LHVFEAMPR-KDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGG 154
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSH-IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
LEDL Q HA GF NS +G+ ++++YA+C G + D K F+ + + LV W+
Sbjct: 155 LEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARC-GSLLDTKKAFDSLEEKGLVAWS 213
Query: 303 TMISGYSQKEEYSDQ-ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
M++ Y+Q ++ S + A F+++ G P + +FV + AC+ ++ G+ +H
Sbjct: 214 IMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 273
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ + N ++ MY KCG+ DA+ +FD+MPE +S NS+I YA +G +EAL
Sbjct: 274 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEAL 333
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+ ML P + T VS+L +H G + G ++F G EP C++DL
Sbjct: 334 SSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDL 393
Query: 481 LGRAGKLTDAERLIEAMP------------------FNPGSIALKAANHFLQLEPSNAVP 522
L R G L AE LI A P + ++ A +LEP ++
Sbjct: 394 LARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGS 453
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
+V+LAN+YA+ G+W + + IR++M V+K+PG SWIE+ +H F++ + HP I+EI
Sbjct: 454 FVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREI 513
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
LE+++ +M++AGYVPD KE+ L HSE+LA+ FGL+ST GE I V
Sbjct: 514 CEELEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRV 573
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+C DCH A K IS++ GREI VRD+ RFH FK G+CSCGD+W
Sbjct: 574 VKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 620
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 227/483 (46%), Gaps = 33/483 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F L C +L G+ +H+ + + + + +SN + +Y KC + A F+
Sbjct: 12 VFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+ +LA YA+ + A +F+ +P+ D VS+N +I+A + AL LF
Sbjct: 72 LLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFH 131
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLH-CLAIYCGFDHYASVNNSLLTCYSRN 177
M + ++ FTL L+ A +L L +Q+H A + +V NS++ Y+R
Sbjct: 132 GMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARC 191
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE--GLEALQLFQEMVSLQLGLDMYTLA 235
G L + K+ F + E K V+W+ M+ AY Q ++ G A + FQEM + + T
Sbjct: 192 GSLLDTKKAFDSLEE-KGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFV 250
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIP 294
S L A ++ L G H SGF + S + G+ +I++Y KC G D VF+++P
Sbjct: 251 SALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKC-GSPSDAKLVFDQMP 309
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
+ L+ WN++I Y+ ++ +AL +++ G+ PD + V ++ S
Sbjct: 310 EKCLISWNSLIVAYAHN-GHALEALSSLQEMLLQGFDPDSGTSVSILYGLS--------- 359
Query: 355 IHALTIKIEIRSNRISVNN-----------ALVAMYSKCGNLEDARRLFDRMP--EHNTV 401
HA ++ + R S+ + LV + ++ G L+ A L P + +T+
Sbjct: 360 -HAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 418
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
+ +++A +G +R E + E P + +FV + + A G+ ++ + MM
Sbjct: 419 AWMTLLAACKSYGDPQRGIRCAERVFELE-PQHSGSFVVLANLYASVGRWSDASRIRKMM 477
Query: 462 KDM 464
+ M
Sbjct: 478 ERM 480
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 34/302 (11%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC---------- 279
D L A + +L G Q H+ ++ SG N I + L+++Y KC
Sbjct: 9 DKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVF 68
Query: 280 --------------------SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+G + VFE +P+ D V WN +I+ ++ D AL
Sbjct: 69 DGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQD-AL 127
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F + G ++ + + ++ AC L L +QIHA N +V N++V M
Sbjct: 128 ELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNM 187
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ--HGIGMEALRLFEWMLETNIPPTNI 436
Y++CG+L D ++ FD + E V+ + M+A YAQ G G A + F+ M I P +
Sbjct: 188 YARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEV 247
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TFVS L ACA + G+ E + +I++ G+ G +DA+ + +
Sbjct: 248 TFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQ 307
Query: 497 MP 498
MP
Sbjct: 308 MP 309
>gi|125525852|gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indica Group]
Length = 641
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 229/696 (32%), Positives = 349/696 (50%), Gaps = 79/696 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T Q L + L+ G LHA LK+ A NH I YSKC
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKS--GLLASFRNHLISFYSKC------------- 50
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R AR++FD+IP P VS+++L++AY++ G SA+ F
Sbjct: 51 ------------------RRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFH 92
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
MR + + F+L ++ + L Q+H +A+ GF V N+L+ Y GF+
Sbjct: 93 GMRAEGVCCNEFSLPVVLKCVPDAR-LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFM 151
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D+A+RVF E G ++ VSWN ++ AY ++ + +A+Q+F EMV + + + ++ A
Sbjct: 152 DDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNA 211
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
T ++ G Q H +++ G+ ++ + L+D+Y K G + +FE++P D+V
Sbjct: 212 CTGSRNIEAGRQVHGMVVRMGYDKDVFTANALVDMYVK-MGRVDIASLIFEKMPDSDVVS 270
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
WN +ISG + +A+ ++ G P+ + ++ AC+ LG+QIH
Sbjct: 271 WNALISG-CVLNGHDHRAIELLLQMKSSGLVPNVFTLSSILKACAGTGAFDLGRQIHGFM 329
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK+ S+ + LV MY+K L+DAR++FD M + + N++I+G + G EA
Sbjct: 330 IKVNADSDDY-IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF + + + T +VL + A + A + + + GF + + +ID
Sbjct: 389 LSLFYELRKEGLGVNRTTLTAVLKSTASL-EAASTTRQVHALAEKIGFIFDAHVVNGLID 447
Query: 480 LLGRAGKLTDAERLIEA------MPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ L+DA R+ E + F AL +H
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIAFTSMITALSQCDH---------------------- 485
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
G W EVA +R+LM+D ++K+P SW+EVK ++H F+ D SHP+ KEI+ L+E+ M
Sbjct: 486 GMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPLTKEIYAKLDELGDLM 545
Query: 594 KQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
+AGYVP +KE L HHSE+LAVAF LLST G PI V KNLRIC DCH
Sbjct: 546 SKAGYVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCH 605
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
A KFIS I REI +RD RFH F+DG CSCGDYW
Sbjct: 606 VAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 641
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 326/577 (56%), Gaps = 37/577 (6%)
Query: 134 LSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
+S LITA S +++ + LHC I ++ + + L++ Y G +A +F E+
Sbjct: 41 VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP 100
Query: 192 EIKDEVSWNSMVVAYGQHRE-GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
+ KD VSWNS++ + + + G+ LF+ + L + T+ +++A + +L G
Sbjct: 101 D-KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVG 159
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
H +KSG + + LI+LY KC G + +FE + LV WN+M++ +
Sbjct: 160 KCIHGIAVKSGMLLEVKVVNSLINLYGKC-GCLEAACCLFEGMSVQSLVSWNSMVAVHVH 218
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+++ +G F + R G + D + V ++ AC NL L + +H + + N +
Sbjct: 219 MG-LAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGN-L 276
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
++ AL+ +Y+K G L D+ ++F M + V+ +M++ YA HG G EA+ FE M+
Sbjct: 277 AIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVRE 336
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P ++TF +LSAC+H+G V EG+ YF +M + +G E EHYSCM+DLLGR+G L D
Sbjct: 337 GVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLND 396
Query: 490 AERLIEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAA 532
A +LI++MP P G+I L + A L+PS++ Y+ L+N+Y+A
Sbjct: 397 AYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSA 456
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+G+W + + +R LM++R + + PG S+IE ++H FV D SHP ++I+N LEE+ RK
Sbjct: 457 AGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRK 516
Query: 593 MKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
++ G+ KE + HSEKLA+AFGLL T+ G P+++ KN+RICGDC
Sbjct: 517 NREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDC 576
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H K IS I R I +RDT RFH F +G CSCGDYW
Sbjct: 577 HGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C G +L GK +H + +K+ + + N I LY KCGCL AA
Sbjct: 142 TVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAAC------ 195
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LF+ + LVS+N++++ + G E + F
Sbjct: 196 -------------------------CLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFI 230
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR ++D T+ L+ A N L + +H + G D ++ +LL Y++ G
Sbjct: 231 MMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLG 290
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L ++ +VF M D V+W +M+ +Y H G EA++ F+ MV + D T +L
Sbjct: 291 TLSDSCKVFGGMIN-PDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLL 349
Query: 239 TAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+A + + G + + + G S ++DL + SG + D K+ + +P +P
Sbjct: 350 SACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGR-SGHLNDAYKLIKSMPMEP 408
Query: 297 DLVLWNTMI 305
+ +W +I
Sbjct: 409 NSGVWGALI 417
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 330/594 (55%), Gaps = 33/594 (5%)
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNN 168
TES +SL++ M D F+ I S +L L +QLHC I G + V
Sbjct: 32 TES-ISLYRSMLRSGSSPDAFSFP-FILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLT 89
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKD-EVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
+L++ Y + G +++A++VF E V +N+++ Y + + +A +F+ M +
Sbjct: 90 ALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGV 149
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+D T+ ++ T E L G H +K G + + + I +Y KC G +
Sbjct: 150 SVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKC-GSVESGR 208
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
++F+E+P L+ WN +ISGYSQ D L F+++ G PD + V V+S+C++L
Sbjct: 209 RLFDEMPVKGLITWNAVISGYSQNGLAYD-VLELFEQMKSSGVCPDPFTLVSVLSSCAHL 267
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ +G+++ L N + ++NAL++MY++CGNL AR +FD MP + VS +M
Sbjct: 268 GAKKIGQEVGELVEANGFAPN-VFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAM 326
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I Y HG+G L LF+ M++ I P FV VLSAC+H+G +G + F MK +
Sbjct: 327 IGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 386
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
EP EHYSC++DLLGRAG+L +A I++MP P +A A
Sbjct: 387 LEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAF 446
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++ EP N YV+++NIY+ S E + IR +MR+R +KKPG+S++E K ++H+F
Sbjct: 447 AKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLF 506
Query: 570 VAEDGSHPMIKEIHNYLEEM-SRKMKQAGYVP-DKEKRLV----HHSEKLAVAFGLLSTS 623
+A D SH +E+H L+E+ + M+ AG + D+ + + HSE+LA+AFG+L++
Sbjct: 507 LAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSI 566
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G ILV+KNLR+C DCH IK +S I R VRD RFH FKDG CSC DYW
Sbjct: 567 PGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 196/461 (42%), Gaps = 44/461 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +LK+C V+G+ LH ++ ++ I +Y KCG + A F +
Sbjct: 52 SFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEEN 111
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H++ V YN LIS Y A +F+
Sbjct: 112 PHSSQLG-----------------------------VCYNALISGYTANSKVSDAAFMFR 142
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E D T+ GL+ + L L + LH + G +V NS +T Y + G
Sbjct: 143 RMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCG 202
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ +R+F EM +K ++WN+++ Y Q+ + L+LF++M S + D +TL S+L
Sbjct: 203 SVESGRRLFDEM-PVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVL 261
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
++ L G + + +GF N + + LI +YA+C G++ VF+ +P L
Sbjct: 262 SSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARC-GNLAKARAVFDIMPVKSL 320
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIH 356
V W MI Y + L F + + G PD FV V+SACS+ L+ +
Sbjct: 321 VSWTAMIGCYGM-HGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFR 379
Query: 357 ALT--IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
A+ K+E S LV + + G L++A D MP E + +++ H
Sbjct: 380 AMKREYKLEPGPEHYS---CLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIH 436
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
A F ++E P NI + ++S K EG
Sbjct: 437 KNVDMAELAFAKVIE--FEPMNIGYYVLMSNIYSDSKNQEG 475
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 315/575 (54%), Gaps = 80/575 (13%)
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE--GLEALQLFQEMVSLQ-LGLDMYTLAS 236
LD A ++F +M + ++ SWN+++ + + E L A+ LF EM+S + + + +T S
Sbjct: 75 LDYAHKIFNQMPQ-RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS---------------- 280
+L A + G Q H +K GF + + S L+ +Y C
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 281 ----------------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKE 312
GD + +F+++ Q +V WNTMISGYS
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISV 371
+ D A+ F+++ + P+ + V V+ A S L S LG+ +H IR + + +
Sbjct: 254 FFKD-AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-L 311
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+AL+ MYSKCG +E A +F+R+P N ++ ++MI G+A HG +A+ F M + +
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P+++ ++++L+AC+H G V EG++YFS M + G EP EHY CM+DLLGR+G L +AE
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 492 RLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASG 534
I MP P + KA AN + + P ++ YV L+N+YA+ G
Sbjct: 432 EFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
Query: 535 KWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
W EV+ +R M+++ ++K PG S I++ +H FV ED SHP KEI++ L E+S K++
Sbjct: 492 NWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Query: 595 QAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHN 642
AGY P DKE L +HSEK+A AFGL+STS G+PI ++KNLRIC DCH+
Sbjct: 552 LAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHS 611
Query: 643 AIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+IK IS + R+ITVRD RFH F+DG CSC DYW
Sbjct: 612 SIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 57/300 (19%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD---CMKVFEEIPQPDLVLWNTMISGY 308
Q HA IKSG +++ + ++ A RD K+F ++PQ + WNT+I G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 309 SQKEEYSDQALGC----FKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
S+ +E D+AL ++ ++ P+ +F V+ AC+ GKQIH L +K
Sbjct: 101 SESDE--DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 364 IRSNRISVNNALVAMYSKCGNLED------------------------------------ 387
+ ++N LV MY CG ++D
Sbjct: 159 FGGDEFVMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 388 ---------ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
AR LFD+M + + VS N+MI+GY+ +G +A+ +F M + +I P +T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
VSVL A + G + G+ + + + G + S +ID+ + G + A + E +P
Sbjct: 278 VSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 151/323 (46%), Gaps = 20/323 (6%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAF--- 57
TF VLK C + GK +H L LK ++ ++ + +Y CG + A F
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 58 -----------NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAY 106
+ + + +NV++ Y R +AR LFD++ Q +VS+NT+IS Y
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYA 164
+ G + A+ +F++M++ + TL ++ A S +L L + LH A G
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
+ ++L+ YS+ G +++A VF + ++ ++W++M+ + H + +A+ F +M
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPR-ENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK-SGFHQNSHIGSGLIDLYAKCSGDM 283
+ ++LTA + + G ++ + ++ G ++DL + SG +
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR-SGLL 427
Query: 284 RDCMKVFEEIP-QPDLVLWNTMI 305
+ + +P +PD V+W ++
Sbjct: 428 DEAEEFILNMPIKPDDVIWKALL 450
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 298/522 (57%), Gaps = 34/522 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L Y +NG L A+++F EM E ++ +WN+MV E+L F +M +
Sbjct: 177 NILFGGYIKNGDLGGARKLFDEMPE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM 235
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D + L S+ L D+V G Q HA++++SG ++ +GS L +Y +C G +++
Sbjct: 236 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC-GCLQEGE 294
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
V +P +V NT+I+G +Q + S+ AL F + VG D +FV IS+CS+L
Sbjct: 295 AVLRMLPSLSIVSCNTIIAGRTQNGD-SEGALEYFCMMRSVGVAADVVTFVSAISSCSDL 353
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + G+QIH +K + + V LV MYS+CG L D+ R+F +T L++M
Sbjct: 354 AALAQGQQIHGQVMKAGV-DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 412
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+ Y HG G +A+ LF+ M+ P+++TF+++L AC+H+G EG F +M +G
Sbjct: 413 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 472
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAA 509
+P +HY+C++DLLGR+G L +AE LI +MP P + A + A
Sbjct: 473 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIA 532
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
++L+P ++ YV+L+NI A S +W +V+ +R+ MRD V+K+PG SW+E+K +H F
Sbjct: 533 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 592
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
D SHP KEI LEEM K++Q GY PD KE L HHSEKLA+AF
Sbjct: 593 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 652
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRD 659
LS G PI VMKNLR+C DCH AIK +S + GREI VRD
Sbjct: 653 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRD 694
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
F + AC L P +Q+HA ++R + N+ ++A Y+ G+L AR LF+R+P
Sbjct: 113 FSHLFRACRALRPL--RQLHAFAATSGAATDRFTANHLMLA-YADLGDLTAARELFERIP 169
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
N +S N + GY ++G A +LF+ M E N+ N
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWN 208
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + +C L G+ +H +K V + + +YS+CGCL + F
Sbjct: 342 TFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY 401
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ F + +++AY A +LF Q+ +P V++ L+ A + G E +
Sbjct: 402 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGM 461
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + T G S HY V + L R
Sbjct: 462 DCFELMTK----TYGMQPS------------------------VKHYTCVVDLL----GR 489
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+G LDEA+ + M D V W +++ A
Sbjct: 490 SGCLDEAEALILSMPLTPDGVIWKTLLSA 518
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 312/543 (57%), Gaps = 39/543 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VS 224
+ + L+TCY++ G+ ++A ++F +M KD VSWNS++ + + +L F M
Sbjct: 76 IGDQLVTCYNKLGYAEDALKLFDDMPH-KDLVSWNSLISGFSRCLH--MSLTAFYTMKFE 132
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + + T+ S+++A D G H IK G + + LI++Y K SGD+
Sbjct: 133 MSVKPNEVTILSMISACNGALD--AGKYIHGFGIKVGGTLEVKVANSLINMYGK-SGDLT 189
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
++FE IP P+ V WN++I+ + + + F K+ R+G D+ + + ++ AC
Sbjct: 190 SACRLFEAIPDPNTVSWNSIIAA-QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQAC 248
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+L L + IH L + +I++ AL+ Y+K G L + +F + + V+
Sbjct: 249 LHLGVGKLAESIHGLMFCTGFGA-KITIATALLDTYAKLGRLSASYGVFTEVGFADRVAW 307
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+M+AGYA HG+G EA++LFE M + P ++TF +LSAC+H+G V EG+ YF++M +
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSE 367
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL-- 506
++G EP +HYSCM+DLLGR G L DA +I+ MP P G+I L
Sbjct: 368 VYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGK 427
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
+ A H + +EP + Y+ML+N+Y+AS W++ A +R L+++RG+++ PG+S IE +
Sbjct: 428 EVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKN 487
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLA 614
H F D SHP ++I++ LEE+ K+++AGY KE + HSEKLA
Sbjct: 488 HHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLA 547
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGLL + GE +++ KNLRICGDCH+ K IS I R I +RD RFH F DG CSC
Sbjct: 548 IAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCA 607
Query: 675 DYW 677
DYW
Sbjct: 608 DYW 610
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 178/400 (44%), Gaps = 24/400 (6%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
C F + + F + L+ Y + A +LFD +P DLVS+N+LIS ++
Sbjct: 58 CREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR 117
Query: 109 CGDTESALSLFKDMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
C +L+ F M+ E + T+ +I+A + L K +H I G V
Sbjct: 118 C--LHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTLEVKVA 175
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
NSL+ Y ++G L A R+F + + + VSWNS++ A + E + F +M L +
Sbjct: 176 NSLINMYGKSGDLTSACRLFEAIPD-PNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 228 GLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
D T+ ++L A L VG L H + +GF I + L+D YAK G +
Sbjct: 235 EQDEGTILALLQACLHLG--VGKLAESIHGLMFCTGFGAKITIATALLDTYAKL-GRLSA 291
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF E+ D V W M++GY+ +A+ F+ + G PD +F ++SACS
Sbjct: 292 SYGVFTEVGFADRVAWTAMLAGYAA-HGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 346 NLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+ + GK + ++ R+ + +V + +CG L DA + MP +
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 405 SMIAG-------------YAQHGIGMEALRLFEWMLETNI 431
+ G A+H I ME L +++ +N+
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNM 450
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L+ C+ +S+H L ++ + Y+K G LSA++ F +
Sbjct: 240 TILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEV 299
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
A+ ++ +LA YA A +LF+ + +PD V++ L+SA + G
Sbjct: 300 GFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGK 359
Query: 117 SLFKDMRE 124
S F M E
Sbjct: 360 SYFNVMSE 367
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 209/571 (36%), Positives = 320/571 (56%), Gaps = 24/571 (4%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L A A + +VF + L+ Y + + AR++FD IP+ + VS+ T+IS YA
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS 165
A LF MR + D F + +++A + + + KQ+HCLA+ G AS
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
V N+L+T Y + G LD+A + F E+ KD+++W++M+ Y Q + EAL LF M
Sbjct: 251 VGNALVTMYGKCGCLDDALKTF-ELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+T ++ A + + L G Q H + +K+G+ + + L+D+YAKC G + D
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC-GSLVD 368
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
K F+ + +PD+VLW +MISGY+Q E ++ AL + ++ P + + V+ ACS
Sbjct: 369 ARKGFDYLKEPDIVLWTSMISGYAQNGE-NETALTLYCRMQMERIMPHELTMASVLRACS 427
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
+L+ GKQIHA TIK S + + +AL MY+KCG+LED +F RMP + ++ N
Sbjct: 428 SLAALEQGKQIHAQTIKYGF-SLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWN 486
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
+MI+G +Q+G G++AL LFE + P +TFV+VLSAC+H G V G+ YF MM D
Sbjct: 487 AMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDE 546
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALK 507
FG P EHY+CM+D+L RAGKL + + IE+ + G +
Sbjct: 547 FGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAY 606
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
A ++L + Y++L++IY A G+ ++V +RRLM+ RGV K+PG SWIE+K Q+H
Sbjct: 607 AGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVH 666
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
VFV D HP I +I + L + MK Y
Sbjct: 667 VFVVGDQIHPQIVKICSELRRLRDHMKDECY 697
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 265/550 (48%), Gaps = 53/550 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +L C ++DL GK++HA L+ S YL+N + LY+KCG + A F
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+N L+ Y+ Q V Y+ + + LF+
Sbjct: 72 TNKDVVSWNCLINGYS----------------QKGTVGYSFV-------------MELFQ 102
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR + +G T SG+ TA+S++ Q H LAI + V +SL+ Y + G
Sbjct: 103 RMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIG 162
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A++VF + E ++ VSW +++ Y R EA +LF M + D + S+L
Sbjct: 163 CMLDARKVFDTIPE-RNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVL 221
Query: 239 TAFTSLEDLVG-GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+A T + DLV G Q H +K+G + +G+ L+ +Y KC G + D +K FE D
Sbjct: 222 SALT-VPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKC-GCLDDALKTFELSGDKD 279
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
+ W+ MI+GY+Q + S +AL F ++ G P + +FV VI+ACS++ GKQIH
Sbjct: 280 DITWSAMITGYAQAGD-SHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIH 338
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
++K +I ALV MY+KCG+L DAR+ FD + E + V SMI+GYAQ+G
Sbjct: 339 GYSLKAGYEC-QIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGEN 397
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
AL L+ M I P +T SVL AC+ + +G++ + +GF E S
Sbjct: 398 ETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSA 456
Query: 477 MIDLLGRAGKLTDAERLIEAMP-------------FNPGSIALKAANHFLQLEPSNAVP- 522
+ + + G L D + MP + LKA F +L P
Sbjct: 457 LSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPD 516
Query: 523 YVMLANIYAA 532
YV N+ +A
Sbjct: 517 YVTFVNVLSA 526
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 306/567 (53%), Gaps = 53/567 (9%)
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNNSLLT-CYSRN-GFLDEAKRVFYEMGEIKDEVSWN 200
+N+ ++Q+H + G + LL C S N G L A+ VF + + WN
Sbjct: 29 SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR-PNTFMWN 87
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Y +E EAL L+ M+ + + YT +L A +S+ L Q HAH+IK
Sbjct: 88 TMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKM 147
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
GF + + L+++Y+K SGD++ +F+++ Q D +AL
Sbjct: 148 GFGSEIYTTNSLLNVYSK-SGDIKSARLLFDQVDQRD------------------TEALN 188
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F ++ G D+ + V + AC++L GK IHA K EI + I + L+ MY
Sbjct: 189 LFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPI-LGCVLIDMY 247
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+KCG+LE+A +F +M E +MI+GYA HG G EAL F M + P +TF
Sbjct: 248 AKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFT 307
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+L+AC+H G V E + F M+ + GF+P EHY CM+DLLGRAG L +AE LIE MP
Sbjct: 308 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPV 367
Query: 500 NPGSI---ALKAANH--------------FLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
P + AL A H +Q++P + Y+ LA+I+AA+G+W + A +
Sbjct: 368 KPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARV 427
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK 602
RR M+++GV K PG S I V H F+A D SHP IKEI + LE++ ++++ GY P
Sbjct: 428 RRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKL 487
Query: 603 EKR------------LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+ HHSEKLAV FGL+ST G I ++KNLR+C DCH IK IS +
Sbjct: 488 GDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKV 547
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
REI +RD RFH FKDG C+CGDYW
Sbjct: 548 YAREILMRDRTRFHLFKDGNCTCGDYW 574
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 37/337 (10%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+A AR +FD+I +P+ +NT+I Y++ + E AL L+ M + +T L+ A
Sbjct: 68 LAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKA 127
Query: 141 SSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVS 198
S+ L +Q+H I GF NSLL YS++G + A+ +F D+V
Sbjct: 128 CSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLF-------DQVD 180
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+ EAL LF M + + LD L S L A L L G HA++
Sbjct: 181 -----------QRDTEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIK 229
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
K + +G LID+YAKC GD+ + ++VF ++ + + +W MISGY+ +A
Sbjct: 230 KHEIEIDPILGCVLIDMYAKC-GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGR-GREA 287
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIE----IRSNRISVNN- 373
L F K+ G P+ +F +++ACS+ +H + E I + S+ +
Sbjct: 288 LEWFMKMQTAGVEPNQMTFTGILTACSH-----AGLVHEAKLLFESMERIHGFKPSIEHY 342
Query: 374 -ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+V + + G L++A L + MP V N+ I G
Sbjct: 343 GCMVDLLGRAGLLKEAEELIENMP----VKPNAAIWG 375
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 49/304 (16%)
Query: 22 HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH-------ANVFSFNVLLAA 74
H LY + VP +AY F L C +SA H + +++ N LL
Sbjct: 108 HMLY--HSVPHNAYT---FPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNV 162
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
Y++ I SAR LFDQ+ Q DTE AL+LF M+ D L
Sbjct: 163 YSKSGDIKSARLLFDQVDQR----------------DTE-ALNLFHRMQTAGIKLDNVAL 205
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN----SLLTCYSRNGFLDEAKRVFYEM 190
+ A + +L ++ Q + Y H ++ L+ Y++ G L+EA VF +M
Sbjct: 206 VSTLQACA-DLGVLDQGKWIHAYIK-KHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 263
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGG 250
E K W +M+ Y H G EAL+ F +M + + + T ILTA + G
Sbjct: 264 EE-KGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH-----AG 317
Query: 251 LQFHAHLIKS------GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNT 303
L A L+ GF + ++DL + +G +++ ++ E +P +P+ +W
Sbjct: 318 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGR-AGLLKEAEELIENMPVKPNAAIWGA 376
Query: 304 MISG 307
+++
Sbjct: 377 LLNA 380
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
L+ C L GK +HA K+ + L I +Y+KCG L A F + +
Sbjct: 208 TLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKG 267
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFK 120
V + +++ YA R A + F ++ +P+ +++ +++A + G A LF+
Sbjct: 268 VSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFE 327
Query: 121 DM 122
M
Sbjct: 328 SM 329
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 235/696 (33%), Positives = 361/696 (51%), Gaps = 61/696 (8%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
S I Y++ G ++ F+ + F + VL+ Y A L+ ++ D
Sbjct: 383 STKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ 442
Query: 97 VSYNTLI--------SAYADC------GDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
+ + S + D G L +F M + + D T+ + A S
Sbjct: 443 TQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACS 502
Query: 143 -------NNLCLIKQ---LHCLAIYCGFD-HYASVNNSLLTCYSRNGFLDEAKRVFYEMG 191
L +K+ +H I D + +L+ Y+ G L + +VF +
Sbjct: 503 ELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIK 562
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
E K +SWN+++ + ++ + EAL LF +M + L D Y+LAS L+A ++ G
Sbjct: 563 E-KTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGA 621
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q H ++IK+G + N + + LID+YAKC G + K+FE+I + LV WN+MI G+SQ
Sbjct: 622 QIHGYIIKTG-NFNDFVQNALIDMYAKC-GFVHSANKMFEKIKEKSLVTWNSMICGFSQN 679
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRIS 370
YS +A+ F ++ D +F+ VI ACS+L GK +H I +R +
Sbjct: 680 G-YSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY- 737
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
++ AL MYSKCG L+ A +FDRM E + VS + MIAGY HG + LF ML +
Sbjct: 738 LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG 797
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I P +ITF+ +LSAC+H G V EG+ YF+ M + FG EP+ +H++CM+DLL RAG L A
Sbjct: 798 IKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGA 856
Query: 491 ERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAAS 533
++I ++PF S I + L ++ ++ Y +L+NIYA
Sbjct: 857 YQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEE 916
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
G W++ +R +M+ +G++K PG+S IE+ K+++ F D SH K+I+ +LE +
Sbjct: 917 GTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLV 976
Query: 594 KQAGY--VPD----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
Y PD KE +V HSEKLA+AFG+++T G + + KNLR+C DCH
Sbjct: 977 HAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCH 1036
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ K S I GREI +RD RFHCF++G CSC DYW
Sbjct: 1037 SFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 212/445 (47%), Gaps = 54/445 (12%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H F H + + L+ +YA+ S++++FD P+PD + LI Y G E
Sbjct: 370 HLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEE 429
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
A+SL+ +M + D +S + S C GF L+
Sbjct: 430 AVSLYHEMVYQ----DQTQISNFVFPSVLKAC-----------SGFGD--------LSVG 466
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+NG E +F +M I + V +S+ + L + E+ SL+LG
Sbjct: 467 GKNGQASEGLDMFSQM--ISEAVEPDSVTM--------LSVTEACSELGSLRLG------ 510
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L + G H +I+ +G L++LYA +G++RDC KVFE I
Sbjct: 511 --------RLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYAD-TGNLRDCHKVFETI 561
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LG 352
+ ++ WNT+IS +++ + ++AL F ++ G PD S +SAC +S S LG
Sbjct: 562 KEKTILSWNTLISIFTRNGQ-PEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 620
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
QIH IK ++ V NAL+ MY+KCG + A ++F+++ E + V+ NSMI G++Q
Sbjct: 621 AQIHGYIIKTGNFND--FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQ 678
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
+G +EA+ LF+ M + +TF+SV+ AC+H G + +G K+ M+G +
Sbjct: 679 NGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSY 737
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ + D+ + G+L A + + M
Sbjct: 738 LDTALTDMYSKCGELQMAHGVFDRM 762
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 183/390 (46%), Gaps = 54/390 (13%)
Query: 18 GKSLHALYLKNLV-PFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
G+S+H ++ + P +L + LY+ G L H F + + S+N L++ +
Sbjct: 518 GRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFT 577
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS- 135
R G E AL LF M+ + D ++L+
Sbjct: 578 RN-------------------------------GQPEEALLLFVQMQTQGLMPDSYSLAS 606
Query: 136 -----GLITASSNNLCLIKQLHCLAIYCG-FDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
G I+ S L Q+H I G F+ + V N+L+ Y++ GF+ A ++F +
Sbjct: 607 SLSACGTISFSQ----LGAQIHGYIIKTGNFNDF--VQNALIDMYAKCGFVHSANKMFEK 660
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
+ E K V+WNSM+ + Q+ +EA+ LF +M + +D T S++ A + L L
Sbjct: 661 IKE-KSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEK 719
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G H LI G ++S++ + L D+Y+KC G+++ VF+ + + +V W+ MI+GY
Sbjct: 720 GKWVHHKLIMYGLRKDSYLDTALTDMYSKC-GELQMAHGVFDRMSERSIVSWSVMIAGYG 778
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIK---IEIRS 366
+ + + F ++ G P+D +F+ ++SACS+ +++ ++ +E +
Sbjct: 779 MHGQI-NATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKH 837
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ + +V + S+ G+L A ++ +P
Sbjct: 838 DHFA---CMVDLLSRAGDLNGAYQIITSLP 864
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 56/299 (18%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q HAHL +G H++ + LI+ YA+ G +VF+ P+PD +W +I Y
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQI-GIFESSKRVFDTFPKPDSFMWGVLIKCYVWG 424
Query: 312 ---EE---------YSDQ--------------------------------ALGCFKKLNR 327
EE Y DQ L F ++
Sbjct: 425 GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMIS 484
Query: 328 VGYHPDDCSFVCVISACSNLSP---------SLGKQIHALTIKIEIRSNRISVNNALVAM 378
PD + + V ACS L G+ +H I+ + + AL+ +
Sbjct: 485 EAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMEL 544
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y+ GNL D ++F+ + E +S N++I+ + ++G EAL LF M + P + +
Sbjct: 545 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
S LSAC G + + F ++ +ID+ + G + A ++ E +
Sbjct: 605 ASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKI 661
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V++ C L GK +H + + +YL +YSKCG L AH F++
Sbjct: 703 TFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM 762
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S++V++A Y +I + LF+Q+ +P+ +++ ++SA + G E
Sbjct: 763 SERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGK 822
Query: 117 SLFKDMRE 124
F M E
Sbjct: 823 LYFNSMSE 830
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 221/623 (35%), Positives = 327/623 (52%), Gaps = 43/623 (6%)
Query: 92 PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--- 148
P P +VSY IS A ALS F M + FT A+++
Sbjct: 80 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139
Query: 149 KQLHCLAIYCGF-DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
QLH LA+ G+ A V+ + L Y + G L A+R+F EM ++ V+WN+++
Sbjct: 140 TQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPN-RNVVAWNAVMTNAV 198
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
LE ++ + + ++ ++ + A + +L G QF+ + K GF ++
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258
Query: 268 IGSGLIDLYAKCS--GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+ + ++D Y KC G R VF+ + + V W +M+ Y+Q ++A +
Sbjct: 259 VSNSVVDFYGKCRCVGKAR---AVFDGMGVRNNVSWCSMVVAYAQNGA-EEEAFFVYLGA 314
Query: 326 NRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
R G P D V++ C+ L LG+ +HA+ ++ I SN I V +ALV MY KCG
Sbjct: 315 RRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSN-IFVASALVDMYGKCGG 373
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LETNIPPTNITFVSVLS 443
+EDA ++F MP+ N V+ N+MI GYA G AL +F+ M + P IT V+VL+
Sbjct: 374 IEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLT 433
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG- 502
AC+ G EG + F MK FG EP EHY+C++DLL RAG A ++I+ MP P
Sbjct: 434 ACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSI 493
Query: 503 ----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+ AA +L+P ++ +V+L+N+ A++G+W E +R+ M
Sbjct: 494 SVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEM 553
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRL 606
++ G++K PG SWI K +HVF A+D +H M +EI L ++ +M+ AGY+PD + L
Sbjct: 554 KNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYAL 613
Query: 607 ------------VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
HSEKLA+AFGL+ G PI +MKNLRIC DCH A KFIS IAGRE
Sbjct: 614 YDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGRE 673
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD FH FK+ CSC DYW
Sbjct: 674 IIVRDNNMFHHFKNYECSCKDYW 696
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 151/371 (40%), Gaps = 54/371 (14%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
C G +L G+ + K +SN + Y KC C
Sbjct: 229 FNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRC---------------- 272
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+ AR +FD + + VS+ +++ AYA G E A ++ R
Sbjct: 273 ---------------VGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRA 317
Query: 126 RFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ F +S ++T + L L + LH +A+ D V ++L+ Y + G +++A
Sbjct: 318 GEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDA 377
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY-TLASILTAFT 242
++VF+EM + ++ V+WN+M+ Y + AL +F +M+ Q Y TL ++LTA +
Sbjct: 378 EQVFFEMPQ-RNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACS 436
Query: 243 SLEDLVGGLQ------FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
GGL F + G + ++DL + + R K+ + +P +
Sbjct: 437 R-----GGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEER-AYKIIQGMPMR 490
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
P + +W ++ G + LG P D ++ SN+ S G+
Sbjct: 491 PSISVWGALLGGCKM---HGKTELGRIAAEKLFELDPQDSGNHVLL---SNMLASAGRWA 544
Query: 356 HALTIKIEIRS 366
A ++ E+++
Sbjct: 545 EATDVRKEMKN 555
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
VL TC G L G++LHA+ +++ + + ++++ + +Y KCG + A F + N
Sbjct: 329 VLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRN 388
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESALSLF 119
+ ++N ++ YA +A +FD++ P+ ++ +++A + G T+ LF
Sbjct: 389 LVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELF 448
Query: 120 KDMREK 125
+ M+ +
Sbjct: 449 QTMKWR 454
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 216/640 (33%), Positives = 335/640 (52%), Gaps = 60/640 (9%)
Query: 31 PFSA--YLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLF 88
PF A +L N + Y++ G L A F++ H N FS+N LL+A+AR R A AR LF
Sbjct: 790 PFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALF 849
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--SSNNLC 146
IP PD SYN +I+A A AL M F + ++ + ++A + +
Sbjct: 850 HAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSR 909
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
Q+H L + ++LL Y++ + +EA+RVF M E ++ VSWNS++ Y
Sbjct: 910 TGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPE-RNIVSWNSLITCY 968
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG-FHQN 265
Q+ EAL LF M+ D TLAS+++A L G Q HA ++KS F ++
Sbjct: 969 EQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFRED 1028
Query: 266 SHIGSGLIDLYAKC------------------------------SGDMRDCMKVFEEIPQ 295
+ + L+D+YAKC S ++ D VF ++ +
Sbjct: 1029 MVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVE 1088
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
+++ WN +I+ Y+Q E ++AL F +L R P ++ V++AC N++ LG+Q
Sbjct: 1089 KNVIAWNVLIAAYAQNGE-EEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQ 1147
Query: 355 IHALTIKIEIR-----SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
H +K R + + V N+LV MY K G+++D ++F+RM + VS N+MI G
Sbjct: 1148 AHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVG 1207
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+AQ+G +AL LFE ML + P ++T + VLSAC H+G V EG++YF M + G P
Sbjct: 1208 HAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIP 1267
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHF 512
+HY+CMIDLLGRAG L + E LI+ M P ++ AA
Sbjct: 1268 SQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKL 1327
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+L+P N+ PYV+L+N+YA GKW +V +R M+ RGV K+PG SWIE+ +++ VF+A
Sbjct: 1328 FELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLAR 1387
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEK 612
D HP EIH L + +M + + ++++S +
Sbjct: 1388 DNGHPCKNEIHAILRIIQMQMSRVSVDSENADGMMNYSTE 1427
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 239/491 (48%), Gaps = 42/491 (8%)
Query: 47 CGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAY 106
CG H + +NV L+ Y +A AR+ FD I +P+ +S+N ++ Y
Sbjct: 168 CGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRY 227
Query: 107 ADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQ--LHCLAIYCGFDHYA 164
G + A+ +F M G+T+S + A +N L + +H + G++H+
Sbjct: 228 HLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHV 287
Query: 165 SVNNSLLTCYSRNGFLD-------------------------------EAKRVFYEMGEI 193
V +S++ Y++ G +D +AKRVF M E
Sbjct: 288 HVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKE- 346
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
++ VSWN+M+ Y + + AL LFQ+M D TL S+L+A T + D+ G +
Sbjct: 347 RNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEV 406
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV--FEEIPQPDLVLWNTMISGYSQK 311
HA IK GF + + + L+ +Y+KC G +R ++ FE + D WN++ISGY ++
Sbjct: 407 HAFAIKCGFFSSPILKNALVRMYSKC-GCLRSAERLLLFEMGSERDSYSWNSLISGY-ER 464
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRIS 370
S+ AL K+ P+ +F ++AC+N+ G QIHA I+ + I
Sbjct: 465 HSMSEAALYALTKMQS-EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDI- 522
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
+ + L+ MY KC + + R+F+ P + + NSMI G A G G L LF+ M +
Sbjct: 523 LRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQG 582
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
I ++TF+ L +C G V G+ YF++M D P EHY CMI+LLG+ G + +
Sbjct: 583 IKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVEL 641
Query: 491 ERLIEAMPFNP 501
E +E MPF P
Sbjct: 642 EDFVEHMPFEP 652
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 236/485 (48%), Gaps = 23/485 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T + C L G+ +HA L++ ++ + + +Y+KCG + AA FN
Sbjct: 254 TVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLA 313
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ +++ A RIA A+++F+ + + +LVS+N +++ Y D AL LF+
Sbjct: 314 PMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQ 373
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR++ + D TL +++A + L + K ++H AI CGF + N+L+ YS+ G
Sbjct: 374 QMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCG 433
Query: 179 FLDEAKR-VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
L A+R + +EMG +D SWNS++ Y +H AL +M S ++ + T +S
Sbjct: 434 CLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTFSSA 492
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A ++ L G+Q HA++I+ G+ + + S LID+Y KC +++FE P D
Sbjct: 493 LAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCR-QFDYSIRIFEARPSRD 551
Query: 298 LVLWNTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQ 354
++LWN+MI G YS K EY L F ++ + G D +F+ + +C S LG+
Sbjct: 552 VILWNSMIFGCAYSGKGEY---GLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRS 608
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI----AGY 410
L + I RI ++ + K G + + + MP T ++ I Y
Sbjct: 609 YFTLMMDESIIP-RIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREY 667
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT-GKVAEGQKYFSMMK--DMFGF 467
+G A + ++N P T + FV+ + ++ G+ AE + S + + F
Sbjct: 668 GNRKLGERAAKCIN---DSN-PLTPVQFVATVDYESNDGGREAESTSFSSEGEGCEELPF 723
Query: 468 EPEGE 472
EGE
Sbjct: 724 SLEGE 728
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 225/469 (47%), Gaps = 40/469 (8%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
F FN + + A +A AR+LFD +P D S+N +I+A + G ALSLF +M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 125 KRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
T++ +++ A +LC +QLH F + +L+ Y L +
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+R F ++ E + +SWN +V Y G A+ +F M+S + YT++ + A
Sbjct: 205 ARRAFDDILE-PNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACR 263
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS---------------------- 280
L G HA +++ G+ + H+ S ++D+YAKC
Sbjct: 264 DNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTS 323
Query: 281 --------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
G + D +VFE + + +LV WN M++GY + + + AL F+++ +
Sbjct: 324 IVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTG-ALLLFQQMRQETREF 382
Query: 333 DDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR- 390
D + V+SAC+ L G+++HA IK S+ I + NALV MYSKCG L A R
Sbjct: 383 DAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPI-LKNALVRMYSKCGCLRSAERL 441
Query: 391 -LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
LF+ E ++ S NS+I+GY +H + AL M ++ + P TF S L+ACA+
Sbjct: 442 LLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIF 500
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ +G + + M G+E + S +ID+ + + + R+ EA P
Sbjct: 501 LLKQGMQIHAYMIRK-GYEIDDILRSVLIDMYCKCRQFDYSIRIFEARP 548
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 225/634 (35%), Positives = 332/634 (52%), Gaps = 88/634 (13%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT-DGFTLSGLITASS 142
A +LF P PD+ +NTLI + + +L F +MR F D F+ + ++ A++
Sbjct: 58 ACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAA 117
Query: 143 N--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
N ++ + QLHC A+ G D + V +L++ Y GF+ A++VF EM E + ++WN
Sbjct: 118 NLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPE-PNAIAWN 176
Query: 201 SMVVAY---GQHREGLEALQLF--QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+MV A G + G E L + ++S + L YT A
Sbjct: 177 AMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKA-------------------- 216
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
G++ ++F E+P D V W+TMI G++ Y
Sbjct: 217 -------------------------GELELAREMFLEMPMKDDVSWSTMIVGFAHN-GYF 250
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
++A F++L R G P++ S V+SAC+ GK +H K + + +SVNNA
Sbjct: 251 EEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGL-AWIVSVNNA 309
Query: 375 LVAMYSKCGNLEDARRLFDR-MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
L+ YSKCGN+ A+ +F+R M E N VS SM+A A HG G EA+ +F M E+ I P
Sbjct: 310 LLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRP 369
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
I F+S+L AC+H G V +G +YF MK M+ EP EHY CM+DL GRAG+L A
Sbjct: 370 DEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEF 429
Query: 494 IEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
+ MP +I A + +L+P+N+ +V+L+N YA +GKW
Sbjct: 430 VCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKW 489
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK-Q 595
++ A++RR M ++ + K PG+S IEV K M+ F+A + + +E + L+E+ R+++ +
Sbjct: 490 KDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVE 549
Query: 596 AGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNA 643
GYVP +KE + HSEKLAVAFG+ G I ++KNLRIC DCH
Sbjct: 550 GGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAV 609
Query: 644 IKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+K IS I EI VRD RFH FKDG CSC DYW
Sbjct: 610 MKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 38/345 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F ++K R + G LH L + + ++ I +Y +CG + A F++
Sbjct: 108 SFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEM 167
Query: 61 QHAN-------------------------------VFSFNVLLAAYARQLRIASARQLFD 89
N + S+NV+LA Y + + AR++F
Sbjct: 168 PEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFL 227
Query: 90 QIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCL 147
++P D VS++T+I +A G E A S F++++ K + +L+G+++ A + L
Sbjct: 228 EMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEF 287
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
K LH G SVNN+LL YS+ G + A+ VF + ++ VSW SM+ A
Sbjct: 288 GKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALA 347
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
H G EA+ +F +M + D S+L A + + G ++ + K ++
Sbjct: 348 MHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKM-KGMYNIEPS 406
Query: 268 IG--SGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYS 309
I ++DLY + +G ++ + ++P P ++W T++ S
Sbjct: 407 IEHYGCMVDLYGR-AGQLQKAYEFVCQMPIPCTAIIWRTLLGACS 450
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/594 (34%), Positives = 318/594 (53%), Gaps = 69/594 (11%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
+++ H I G + L++ Y+++ L + + +F E +D ++S++ A
Sbjct: 22 LRRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPR-RDLHLYSSLLAAVS 80
Query: 208 QHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
L L + M+S L D + LASI +A L L G Q H H + S + +
Sbjct: 81 HSESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDD 140
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL- 325
+ S LID+Y KC G D KVF+ I + V+W +ISGY SD+AL F+ +
Sbjct: 141 VVKSSLIDMYCKC-GVPDDARKVFDSIVAKNSVMWTALISGYVLNGR-SDEALELFRSMP 198
Query: 326 ------------------------------NRVGYHPDDCSFV--CVISACSNLSPS-LG 352
R G DD +FV I ++L+ LG
Sbjct: 199 GRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDD-AFVLSSAIGGAADLAAHVLG 257
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+Q+H+LT+++ S+ I V NA+V MYSKC ++ AR +F+ + + +S +M+ G AQ
Sbjct: 258 RQLHSLTMRLGFSSSMI-VGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQ 316
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG EA L++ M+ + P +TFV ++ AC+H G V +G++ F MK +G P +
Sbjct: 317 HGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQ 376
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNP-----------------GSIALKAANHFLQL 515
HY+C +DLL R+G L +AE LI MP+ P ++++ A++ L+L
Sbjct: 377 HYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLEL 436
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
P YV+L+N+YA +GKW+ V T+R+LM D ++K+PG+SWIEV ++ +F A +
Sbjct: 437 RPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVP 496
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTS 623
+ +EI +LEE+ +M+Q GYVPD KE L HSE+LAVAFG+L +
Sbjct: 497 IDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSP 556
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I V+KNLR+C DCH +KFIS I R+I VRD RFH F+ G+CSC ++W
Sbjct: 557 LGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 43/433 (9%)
Query: 70 VLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFD 128
+L++AYA+ + R LFD+ P+ DL Y++L++A + E L L + M
Sbjct: 43 LLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALR 102
Query: 129 TDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D F L+ + +A++ +LCL KQLH + + V +SL+ Y + G D+A++V
Sbjct: 103 PDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKV 162
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM----------------------VS 224
F + K+ V W +++ Y + EAL+LF+ M +
Sbjct: 163 FDSI-VAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSA 221
Query: 225 LQLGLDM----------YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
++L +DM + L+S + L V G Q H+ ++ GF + +G+ ++D
Sbjct: 222 VKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVD 281
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
+Y+KCS D+ +VFEEI D++ W TM+ G +Q +++A + ++ G P++
Sbjct: 282 MYSKCS-DIHSAREVFEEITGRDIISWTTMLVGEAQHGR-AEEAFSLYDRMVLAGVKPNE 339
Query: 335 CSFVCVISACSNLS-PSLGKQIHALTIKIEIRSN-RISVNNALVAMYSKCGNLEDARRLF 392
+FV +I ACS+ G+Q+ ++K E N R+ + + S+ G+L +A L
Sbjct: 340 VTFVGLIYACSHAGLVQKGRQLFD-SMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELI 398
Query: 393 DRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
MP + + S+++ ++ ++R+ + +LE P T+V + + A GK
Sbjct: 399 TTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELR-PKYPSTYVLLSNVYAVNGKW 457
Query: 452 AEGQKYFSMMKDM 464
+M DM
Sbjct: 458 DSVDTVRKLMADM 470
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 140/302 (46%), Gaps = 11/302 (3%)
Query: 13 RDLVTGKSLHALYLKNLVPFSA--YLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNV 70
R L GK LH ++ + P+S+ + + I +Y KCG A F+ N +
Sbjct: 119 RSLCLGKQLHGHFVAS--PYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTA 176
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDT- 129
L++ Y R A +LF +P L ++ LIS + G++ SA+ LF DMR
Sbjct: 177 LISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSID 236
Query: 130 DGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
D F LS I +++ L +QLH L + GF V N+++ YS+ + A+ VF
Sbjct: 237 DAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVF 296
Query: 188 YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL 247
E+ +D +SW +M+V QH EA L+ MV + + T ++ A + +
Sbjct: 297 EEITG-RDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLV 355
Query: 248 VGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDLVLWNTMI 305
G Q F + + G + + +DL ++ SG + + ++ +P PD W +++
Sbjct: 356 QKGRQLFDSMKGEYGINPRLQHYTCYLDLLSR-SGHLAEAEELITTMPYVPDEATWASLL 414
Query: 306 SG 307
S
Sbjct: 415 SA 416
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 317/601 (52%), Gaps = 66/601 (10%)
Query: 140 ASSNNLCLIKQLHCLAIYCGF--DHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
+S L + Q+H I G D++ + S +G + A+ +FY + + D
Sbjct: 43 SSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK-PDIF 101
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAH 256
N+++ AY ++A+ + EM + D++T +L A + + L G H+H
Sbjct: 102 IANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSH 161
Query: 257 LIKSGFHQNSHIGSGLIDLYAKCS------------------------------GDMRDC 286
+ K G+ + + L+ +YA C G +
Sbjct: 162 VFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSA 221
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
++FE +P D+V W+ MI+GY Q+ + + LG F+ + P++ V +SAC++
Sbjct: 222 RRMFEAMPDRDVVSWSVMINGYVQESRFK-EGLGLFQDMMGEKIEPNESVLVNALSACAH 280
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
L G+ I + +R + + AL+ MYSKCG++E A +F +M E N ++ ++
Sbjct: 281 LGAMEQGQWIERYMERKNVRLT-VRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSA 339
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMF 465
MI G A +G G +AL LF M + P +TF+ +L+AC+H+ V EG +F M ++
Sbjct: 340 MINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIY 399
Query: 466 GFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKA 508
G +P H+ CM+DL GRAG L A+ +I++MPF P S + +
Sbjct: 400 GLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQV 459
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
L+L+P++ YV+L+NIYAA G+W+ VA +RR+MR+R V K PG S+I++ +H
Sbjct: 460 GKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHE 519
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
FVA D SHP ++ I+ L EMS+++K AGY PD KE L HHSEKLA+A
Sbjct: 520 FVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIA 579
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL+ T G I + KNLR+C DCH+A K IS I REI VRD RFH F+DG CSC D+
Sbjct: 580 FGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDF 639
Query: 677 W 677
W
Sbjct: 640 W 640
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 213/481 (44%), Gaps = 55/481 (11%)
Query: 30 VPFSAYLSNHFILLY-SKCGCLSAAHHAFNQTQHANVFSFNVL------LAAYARQLRIA 82
+P L + IL + S C L QT +FS N + AA + I
Sbjct: 27 IPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIP 86
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-TDGFTLSGLITAS 141
AR LF +I +PD+ NTLI AYA + A+ + +M E D T L+ A
Sbjct: 87 YARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKAC 146
Query: 142 SN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------ 187
S +L L + +H G+ SV+N L+ Y+ G ++ A VF
Sbjct: 147 SEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWN 206
Query: 188 ------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
+E +D VSW+ M+ Y Q E L LFQ+M+ ++
Sbjct: 207 IMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEP 266
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ L + L+A L + G ++ + +G+ LID+Y+KC G + ++V
Sbjct: 267 NESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKC-GSVERALEV 325
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--L 347
F ++ + +++ W+ MI+G + + D AL F ++ G P++ +F+ +++ACS+ L
Sbjct: 326 FHKMKEKNVLAWSAMINGLAINGQGKD-ALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 384
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSM 406
H++T ++ N + +V +Y + G L+ A+ + MP + N+ ++
Sbjct: 385 VDEGCSFFHSMTSIYGLKPN-AHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGAL 443
Query: 407 IAGYAQHG---IGME-ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
+ HG +G + RL E L+ N + ++ +AC +VAE ++ MM+
Sbjct: 444 LNACRIHGDTELGEQVGKRLLE--LDPNHGGRYVLLSNIYAACGRWDRVAELRR---MMR 498
Query: 463 D 463
+
Sbjct: 499 E 499
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 156/312 (50%), Gaps = 8/312 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C L G+++H+ K +SN + +Y+ CG + +A F++T
Sbjct: 138 TFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRT 197
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S+N+++ Y + SAR++F+ +P D+VS++ +I+ Y + L LF+
Sbjct: 198 PECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQ 257
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHY---ASVNNSLLTCYSRN 177
DM ++ + + L ++A + +L ++Q + Y + + +L+ YS+
Sbjct: 258 DMMGEKIEPNESVLVNALSACA-HLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKC 316
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G ++ A VF++M E K+ ++W++M+ + +G +AL LF +M + + T I
Sbjct: 317 GSVERALEVFHKMKE-KNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGI 375
Query: 238 LTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
L A + + + G FH+ G N+H ++DLY + +G + V + +P +
Sbjct: 376 LNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGR-AGMLDQAQTVIKSMPFK 434
Query: 296 PDLVLWNTMISG 307
P+ +W +++
Sbjct: 435 PNSAIWGALLNA 446
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/604 (35%), Positives = 319/604 (52%), Gaps = 77/604 (12%)
Query: 144 NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+L IKQ+H + G S+ L+ Y L A+ VF + + + WN M+
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMI 126
Query: 204 VAYGQHREGLEALQLFQEMVS--LQLGLDMYTLASILTAFTSLEDLVG-GLQFHAHLIKS 260
AY + E+L LF +M++ D YT + TA + L G G H ++K
Sbjct: 127 QAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKD 186
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE------- 313
G+ + +G+ L+++Y+ S M D +VF+E+PQ D++ W +++ GY+ + E
Sbjct: 187 GYESDIFVGNSLVNMYSIFS-RMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRAREL 245
Query: 314 -----------------------YSDQALGCFKK-LNRVGYHPDDCSFVCVISACSNLSP 349
+ ++AL CF L P++ V ++SAC++L
Sbjct: 246 FDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGA 305
Query: 350 -SLGKQIHALTIKIEIRSNRI----SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
GK IH + I NRI +++ AL+ MY+KCG ++ ARR+FD + + + ++
Sbjct: 306 LDQGKWIH-----VYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWT 360
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
SMI+G + HG+G E L F ML P +IT + VL+ C+H+G V EG F M +
Sbjct: 361 SMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPL 420
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---------------- 508
+G P+ EHY C+IDLLGRAG+L A I++MP P +A +A
Sbjct: 421 WGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGER 480
Query: 509 -ANHFLQLEP-SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
NH +L P S+ YV+L+N+YA+ G+WE V +R+ M RG + PG SWIE+ +
Sbjct: 481 IINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVV 540
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMK-QAGYVP------------DKEKRLVHHSEKL 613
H F+A D HP I EI+ L E+ R++ + GYVP DKE+ + HSEKL
Sbjct: 541 HEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKL 600
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
AVAFGLLST G I + KNLR C DCH+A+K IS + REI VRD RFH F+ G CSC
Sbjct: 601 AVAFGLLSTQEGT-IRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSC 659
Query: 674 GDYW 677
DYW
Sbjct: 660 TDYW 663
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 143/314 (45%), Gaps = 10/314 (3%)
Query: 1 TFRQVLKTCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
TF V C L G+++H + +K+ ++ N + +YS + A F++
Sbjct: 158 TFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDE 217
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+V ++ ++ YA + + AR+LFD +P + VS+ +++ Y AL F
Sbjct: 218 MPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCF 277
Query: 120 KDMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHY---ASVNNSLLTCYS 175
DM + L +++A + +L + Q + +Y + ++++ +L+ Y+
Sbjct: 278 NDMLCHDEVKPNEAVLVSILSACA-HLGALDQGKWIHVYIDKNRILLSSNISTALIDMYA 336
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G +D A+RVF + + +D ++W SM+ H G E L F EM++ D TL
Sbjct: 337 KCGRIDCARRVFDGLHK-RDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLL 395
Query: 236 SILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+L + + GL FH + G LIDL + +G + + + +P
Sbjct: 396 GVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGR-AGRLESAFEAIKSMP 454
Query: 295 -QPDLVLWNTMISG 307
+PD+V W ++S
Sbjct: 455 MEPDVVAWRALLSA 468
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 207/549 (37%), Positives = 309/549 (56%), Gaps = 42/549 (7%)
Query: 167 NNSLLTCYSRNG-FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+N+L++ SR+ L A+ +F M + +D +W+++V Y +H + AL L++ M
Sbjct: 97 HNTLISALSRSPRHLPSARELFDRMPQ-RDHFAWSALVSGYTRHGQPEAALALYRRMQE- 154
Query: 226 QLGLD----MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ---NSHIGSGLIDLYAK 278
+ G D +T +S L A + G + H H+++ G ++ + S L D+YAK
Sbjct: 155 EPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAK 214
Query: 279 CSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFV 338
C G + D +VF+ +P D V W M+ Y + L G P++ ++
Sbjct: 215 C-GRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYA 273
Query: 339 CVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE 397
V+ AC+ + S G+Q+H K + +AL+ MYSKCG++ A R+F+ M +
Sbjct: 274 GVLRACAQFAVESFGRQVHGRMAKSGT-GDSCFAESALLRMYSKCGDMGSAVRVFEAMAK 332
Query: 398 HNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY 457
+ VS ++I+GYAQ+G EALR F+ L + I P ++TFV VLSACAH G V +G +
Sbjct: 333 PDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEI 392
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG--------------- 502
F +K+ + E +HY+C+IDLL R+G+ AE++I M P
Sbjct: 393 FHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHK 452
Query: 503 --SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
+A +AA ++EP N YV LANIYA+ G ++EV +RR+M +G+ K P SWI
Sbjct: 453 NVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWI 512
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVH 608
EV +++HVF+ D SHP EI+ L+++ KM + GYV D KE+ + +
Sbjct: 513 EVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGY 572
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSE+LAVAFG+++T G PI V KNLRICGDCH AIK IS I R+I VRD+ RFH FKD
Sbjct: 573 HSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKD 632
Query: 669 GRCSCGDYW 677
G CSC DYW
Sbjct: 633 GICSCRDYW 641
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 223/449 (49%), Gaps = 29/449 (6%)
Query: 33 SAYLSNHFI-LLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLR-IASARQLFDQ 90
S LSN + LL S L A F+ ++ S N L++A +R R + SAR+LFD+
Sbjct: 61 STVLSNRLLHLLSSHPATLPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDR 120
Query: 91 IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG----FTLSGLITASSNNLC 146
+PQ D +++ L+S Y G E+AL+L++ M+E+ DG FT S + A++ C
Sbjct: 121 MPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEP-GNDGADNEFTASSALAAAAAARC 179
Query: 147 --LIKQLHCLAIYCGFDHY---ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++LHC + G D A + ++L Y++ G +D+A+RVF M ++D VSW +
Sbjct: 180 GRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRM-PVRDAVSWTA 238
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
MV Y G E +LF M+ + + + +T A +L A G Q H + KS
Sbjct: 239 MVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKS 298
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G + S L+ +Y+KC GDM ++VFE + +PDLV W +ISGY+Q + ++AL
Sbjct: 299 GTGDSCFAESALLRMYSKC-GDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ-PEEALR 356
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNA-----L 375
F R G PD +FV V+SAC++ G L I I+ + A +
Sbjct: 357 YFDMFLRSGIKPDHVTFVGVLSACAH----AGLVDKGLEIFHSIKEQYCIEHTADHYACV 412
Query: 376 VAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH-GIGMEALRLFEWMLETNIPP 433
+ + S+ G E A ++ M + N S++ G H +G+ A R E + E P
Sbjct: 413 IDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGL-ARRAAEALFEIE-PE 470
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMK 462
T+V++ + A G E + +M+
Sbjct: 471 NPATYVTLANIYASVGLFDEVEDVRRIME 499
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV---------FSFNVL 71
LH L + + P N F C A +F + H + F+ + L
Sbjct: 257 LHMLRTRGVRP------NEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESAL 310
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
L Y++ + SA ++F+ + +PDLVS+ +IS YA G E AL F D
Sbjct: 311 LRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDH 370
Query: 132 FTLSGLITASSNNLCLIKQLHCL----AIYC---GFDHYASVNNSLLTCYSRNGFLDEAK 184
T G+++A ++ + K L YC DHYA V + L SR+G + A+
Sbjct: 371 VTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLL----SRSGQFERAE 426
Query: 185 RVFYEMGEIKDEVSWNSMV 203
++ M ++ W S++
Sbjct: 427 KMIGNMAVKPNKFLWASLL 445
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 236/717 (32%), Positives = 367/717 (51%), Gaps = 81/717 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K+ G L GK +HA+ +K Y+ N I LY K GC
Sbjct: 128 TYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGC----------- 176
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
S++ A ++F+++P+ D+VS+N++IS Y D +L LFK
Sbjct: 177 ------SWD--------------AEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFK 216
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDH-YASVNNSLLTCYSRN 177
+M + F D F+ + A S+ + K+LHC A+ + V S+L YS+
Sbjct: 217 EMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKY 276
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLA 235
G + A+R+F + + ++ V+WN ++ Y ++ +A FQ+M S Q GL D+ TL
Sbjct: 277 GEVSYAERIFKCIIQ-RNIVAWNVLIGCYARNSRVTDAFLCFQKM-SEQNGLQPDVITLI 334
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L A LE G H + ++ GF + + + LID+Y + G ++ +F+ I +
Sbjct: 335 NLLPACAILE----GRTIHGYAMRRGFLPHIVLDTALIDMYGEW-GQLKSAEVIFDRIAE 389
Query: 296 PDLVLWNTMISGYSQK-EEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSLGK 353
+L+ WN++I+ Y Q + YS AL F+KL PD + ++ A +LS S G+
Sbjct: 390 KNLISWNSIIAAYVQNGKNYS--ALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGR 447
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIHA +K SN I + N+LV MY+ CG+LEDAR+ F+ + + VS NS+I YA H
Sbjct: 448 QIHAYIVKSRYGSNTI-ILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVH 506
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G ++ LF M+ + + P TF S+L+AC+ +G V EG +YF MK +G +P EH
Sbjct: 507 GFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 566
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y M+DL+GR G + A+R I MPF P ++A AA ++E
Sbjct: 567 YGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKME 626
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
N YV+L N+YA + +WE+V I+ LM +G+ + S +E K + HV D SH
Sbjct: 627 HDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSH 686
Query: 577 PMIKEIHNYLEEMSR----------------KMKQAGYVPDKEKRLVHHSEKLAVAFGLL 620
+I+ L+ +SR K+++ + HS +LA FGL+
Sbjct: 687 VETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLAKSRSNSPRRHSVRLATCFGLI 746
Query: 621 STSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ST G + V N RIC CH ++ S + REI V D+ FH F +GRCSCG+YW
Sbjct: 747 STETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSKIFHHFSNGRCSCGNYW 803
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 219/415 (52%), Gaps = 12/415 (2%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+ T+ N + L +A + A QLFD++ + D +N +I + CG AL
Sbjct: 52 YKVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEAL 111
Query: 117 SLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
L+ M D FT +I + + ++L K++H + I F V NSL++ Y
Sbjct: 112 QLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLY 171
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G +A++VF EM E +D VSWNSM+ Y +G +L LF+EM+ D ++
Sbjct: 172 MKLGCSWDAEKVFEEMPE-RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFST 230
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S L A + + G + H H ++S + + + ++D+Y+K G++ ++F+ I
Sbjct: 231 MSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSK-YGEVSYAERIFKCI 289
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLG 352
Q ++V WN +I Y++ +D A CF+K++ + G PD + + ++ AC+ L G
Sbjct: 290 IQRNIVAWNVLIGCYARNSRVTD-AFLCFQKMSEQNGLQPDVITLINLLPACAILE---G 345
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH ++ + I ++ AL+ MY + G L+ A +FDR+ E N +S NS+IA Y Q
Sbjct: 346 RTIHGYAMRRGFLPH-IVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQ 404
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFG 466
+G AL LF+ + ++++ P + T S+L A A + ++EG++ + ++K +G
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYG 459
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 18/331 (5%)
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
L ++ +G +++A ++F EM + D WN M+ + EALQL+ MV + D
Sbjct: 67 LRGFADSGLMEDALQLFDEMNK-ADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKAD 125
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK--CSGDMRDCMK 288
+T ++ + T + L G + HA +IK F + ++ + LI LY K CS D K
Sbjct: 126 SFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAE---K 182
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL- 347
VFEE+P+ D+V WN+MISGY E+ ++L FK++ + G+ PD S + + ACS++
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALED-GFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVY 241
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
SP++GK++H ++ I + + V +++ MYSK G + A R+F + + N V+ N +I
Sbjct: 242 SPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLI 301
Query: 408 AGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDM 464
YA++ +A F+ M E N + P IT +++L ACA + EG+ ++M +
Sbjct: 302 GCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRR-- 355
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
GF P + +ID+ G G+L AE + +
Sbjct: 356 -GFLPHIVLDTALIDMYGEWGQLKSAEVIFD 385
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
++ G +EDA +LFD M + +T N MI G+ G+ EAL+L+ M+ + + + T+
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC--MIDLLGRAGKLTDAERLIEA 496
V+ + + EG+K +M + + Y C +I L + G DAE++ E
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAM---VIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEE 186
Query: 497 MP 498
MP
Sbjct: 187 MP 188
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 235/698 (33%), Positives = 371/698 (53%), Gaps = 106/698 (15%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQP---DLVSYNTLISAYADCGDTESALSLF 119
+NVF N +++ Y + + AR++FD++ D V++N+++S Y+ C A+SLF
Sbjct: 159 SNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLF 218
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLI---------KQLHCLAIYCGFDHYASVNNSL 170
++M T G+ + N L + +Q+H + G V N+L
Sbjct: 219 REM------TVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNAL 272
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY-------------GQHRE------ 211
+ Y++ G +++A +VF M KD V+WN+MV Y G+ RE
Sbjct: 273 VDMYAKCGKMEDANKVFERM-RFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 331
Query: 212 ----------------GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
G EA+ +F++M + ++ TL S+L+A S+ L+ G + H
Sbjct: 332 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 391
Query: 256 HLIK---SGFHQNSH----IGSGLIDLYAKCSGDMRDCMKVFEEI-PQP-DLVLWNTMIS 306
+ +K G H + + + LID+YAKC + +F+EI P+ D+V W MI
Sbjct: 392 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKS-LEVARAMFDEICPKDRDVVTWTVMIG 450
Query: 307 GYSQKEEYSDQALGCFKKLNRVG--YHPDDCSFVCVISACSNLSP-SLGKQIHALTIK-I 362
GY+Q + ++ AL F ++ ++ P+D + CV+ AC+ L+ GKQIHA ++
Sbjct: 451 GYAQHGD-ANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRS 509
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
I S+ + V N L+ MYSK G+++ A+ +FD M + N VS S++ GY HG +A R+
Sbjct: 510 RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRV 569
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F+ M + + ITF+ VL AC+H+G FG +P EHY+CM+DLLG
Sbjct: 570 FDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLG 616
Query: 483 RAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVPYVM 525
RAG+L +A RLI MP P + A AA L+L+ N Y +
Sbjct: 617 RAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTL 676
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
L+NIYA + +W++VA I LM+ G++K PG+SW++ +K M F D +H ++I+
Sbjct: 677 LSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYET 736
Query: 586 LEEMSRKMKQAGY----VPDKEK--RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
L ++ +++K A + V D+EK +L HSEKLA+A+ +L+ G PI + KNLRICGD
Sbjct: 737 LADLIKRIK-ANFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGD 795
Query: 640 CHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H+AI +IS I EI +RD+ RFH FK+G CSC YW
Sbjct: 796 FHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 11/309 (3%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE-ALQL 218
+ Y +V N + T S N + + + V W + ++ + H AL+L
Sbjct: 54 LNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRL 113
Query: 219 FQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK 278
F+ M +L D YT + A + + G H +I+ GF N + + +I +Y K
Sbjct: 114 FRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGK 173
Query: 279 CSGDMRDCMKVFEEIPQP---DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH--PD 333
C + KVF+E+ D V WN+++S YS + A+ F+++ VGY PD
Sbjct: 174 CKAVVH-ARKVFDELCYRGICDSVTWNSIVSVYSHCF-VPNVAVSLFREMT-VGYGILPD 230
Query: 334 DCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLF 392
V ++ C L L G+Q+H ++ + + + V NALV MY+KCG +EDA ++F
Sbjct: 231 TVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVED-VFVGNALVDMYAKCGKMEDANKVF 289
Query: 393 DRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVA 452
+RM + V+ N+M+ GY+Q+G +AL LF M E I +T+ SV+S A G
Sbjct: 290 ERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGC 349
Query: 453 EGQKYFSMM 461
E F M
Sbjct: 350 EAMDVFRQM 358
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 144/315 (45%), Gaps = 43/315 (13%)
Query: 253 FHAHLIKSGFHQNSHIG-SGLIDLYAKCSGDMRDCMKVFEEIPQPD---LVLWNTMISGY 308
H I +G NS+ + LI Y S + + + + E+ P + WN +I +
Sbjct: 43 LHQQYIINGHLLNSYTNVTNLIYTYIS-SNSITNAILLLEKNVTPSHSSVYWWNQLIR-H 100
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
+ + AL F+++ + + PD +F V AC +S LG IH I++ SN
Sbjct: 101 ALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESN 160
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEH---NTVSLNSMIAGYAQHGIGMEALRLF- 423
+ V NA+++MY KC + AR++FD + ++V+ NS+++ Y+ + A+ LF
Sbjct: 161 -VFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFR 219
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS------MMKDMFGFEPEGEHYSCM 477
E + I P + V++L C + G G++ +++D+F + +
Sbjct: 220 EMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVG-------NAL 272
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+D+ + GK+ DA ++ E M F + V + + Y+ +G++E
Sbjct: 273 VDMYAKCGKMEDANKVFERMRFK------------------DVVTWNAMVTGYSQNGRFE 314
Query: 538 EVATIRRLMRDRGVQ 552
+ ++ MR+ ++
Sbjct: 315 DALSLFGKMREEKIE 329
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 39/261 (14%)
Query: 7 KTCVGRRDLVT-----------GKSLHALYL--KNLVPFSAYLSNHFILLYSKCGCLSAA 53
+ C RD+VT G + HAL L + + + N F + C A
Sbjct: 434 EICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA 493
Query: 54 HHAFNQTQHANV-----------FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTL 102
F + HA V F N L+ Y++ + +A+ +FD + + + VS+ +L
Sbjct: 494 ALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSL 553
Query: 103 ISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDH 162
++ Y G +E A +F +MR++ DG T ++ A S++ + G +H
Sbjct: 554 LTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS------GMDFGVDPGVEH 607
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
YA + + L R G L EA R+ +M V W +++ A H E L F
Sbjct: 608 YACMVDLL----GRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSN--EELAEFAAK 661
Query: 223 VSLQLGLD---MYTLASILTA 240
L+L D YTL S + A
Sbjct: 662 KLLELKADNDGTYTLLSNIYA 682
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 331/577 (57%), Gaps = 44/577 (7%)
Query: 137 LITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
L ++SS ++C I H + D + + + L++CY + G +A +F EM + KD
Sbjct: 55 LKSSSSVSICRIIHAHVIKSLDYRDGF--IGDQLVSCYLKMGPTKDAYLLFDEMPK-KDF 111
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVS-LQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VSWNS+V + + E L +F +M S +L L+ +T S+++A S + G H
Sbjct: 112 VSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHC 171
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD--LVLWNTMISGYSQKEE 313
+K G + + L+++Y K G + ++F E+P+ + +V WN++++ +Q
Sbjct: 172 CAMKLGLVYEVKVVNALVNMYGK-FGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNG- 229
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI---HALTIKIEIRSNRIS 370
++A CF + G+ PDD + V ++ AC N LG+ + H + + N ++
Sbjct: 230 MPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFP--LGRMVEVLHGVIFTCGLDEN-LT 286
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML-ET 429
+ L+ +YSK G L ++R++F+ + + + V+ +M+AGYA HG G EA+ FE ++ E
Sbjct: 287 IVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREE 346
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P ++TF +LSAC+H+G V EG+ +F +M D++ +P +HYSCM+DLLGR G L D
Sbjct: 347 GMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDD 406
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A LI+ MPF P S + +AA + + L+PS+ Y+ML+N+Y+A
Sbjct: 407 AHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSA 466
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+G W + + +R LM+++ + + G S+IE ++H FV +D +HP IH LEE+ +K
Sbjct: 467 AGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKK 526
Query: 593 MKQAGYVPDKEKRL------------VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
++ G+V + E L HSEK+A+A+GLL T+ P++++KNLRIC DC
Sbjct: 527 IQDVGFVHETESILHDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDC 586
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
HN +KF+S + R I +RDT RFH F G CSCGDYW
Sbjct: 587 HNTVKFVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 211/459 (45%), Gaps = 20/459 (4%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
T +A+ + PF + L H S C H + + F + L++ Y
Sbjct: 32 TSLQFNAISTHHFDPFLSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYL 91
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR-EKRFDTDGFTLS 135
+ A LFD++P+ D VS+N+L+S A G LS+F M+ + + FT
Sbjct: 92 KMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFL 151
Query: 136 GLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
+I+A + + +HC A+ G + V N+L+ Y + GF++ A R+F EM E
Sbjct: 152 SVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPES 211
Query: 194 -KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS--LEDLVGG 250
K VSWNS+V Q+ EA F M D T+ S+L A + L +V
Sbjct: 212 EKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEV 271
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
L H + G +N I + L++LY+K G + + KVFEEI +PD V W M++GY+
Sbjct: 272 L--HGVIFTCGLDENLTIVTTLLNLYSKL-GRLNNSRKVFEEISKPDKVAWTAMLAGYAM 328
Query: 311 KEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNR 368
+A+ F+++ R G PD +F ++SACS+ GK + + R
Sbjct: 329 -HGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPR 387
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH---GIGMEALRLFE 424
+ + +V + +CG L+DA L MP E N+ +++ H +G EA +
Sbjct: 388 LDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNL- 446
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
L+ + P I ++ SA G + K ++MK+
Sbjct: 447 IALDPSDPRNYIMLSNMYSA---AGLWNDASKVRTLMKN 482
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 227/691 (32%), Positives = 349/691 (50%), Gaps = 113/691 (16%)
Query: 49 CLSAAHHAFNQTQ--HANVFS---FN------VLLAAYARQLRIASARQLFDQIPQPDLV 97
CL++ + +QT+ HA++ FN LL+ YA + A A + D +P+P++
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 98 SYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLA 155
S++TLI A++ ALS F M + D L + A + + L +Q+H +A
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140
Query: 156 IYCGFDHYASVNNSLL-------------------------------TCYSRNGFLDEAK 184
GFD + V +SL+ Y+R G +DEAK
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 185 RVFYEMGEI---KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
R+F EMG+ + +SWN M+ + EA+ +F +M D T++S+L A
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--------------------- 280
LEDLV G+ H ++IK G + + S LID+Y KCS
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320
Query: 281 ---------GDMRDCMKVFEEIP----QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
G + +++F ++ + ++V W +MI+ SQ +AL F+++
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR-DMEALELFREMQI 379
Query: 328 VGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G P+ + C++ AC N++ + GK H +++ I S + V +AL+ MY+KCG ++
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI-STDVYVGSALIDMYAKCGRIQ 438
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+R FD +P N V N++IAGYA HG EA+ +F+ M + P I+F VLSAC+
Sbjct: 439 ASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACS 498
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG---- 502
+G EG YF+ M +G E EHY+CM+ LL RAGKL A +I MP NP
Sbjct: 499 QSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVW 558
Query: 503 -------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
S+ AA +LEPSN Y++L+NIYA+ G W EV +R +M+++
Sbjct: 559 GALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNK 618
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP--------- 600
G++K PG SWIEVK ++H+ +A D SHP + +I L+++S +MK+ GY P
Sbjct: 619 GLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDV 678
Query: 601 ---DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
DKE+ L HSEKLAV FGLL+T G P+
Sbjct: 679 EEQDKEQILCGHSEKLAVVFGLLNTPPGYPL 709
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 12/315 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL DLV G +H +K + +S+ I +Y KC C S F+Q
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311
Query: 61 QHANVFSFNVLLAAYARQLRIASA----RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
H +V S N + +R ++ S+ RQL DQ + ++VS+ ++I+ + G AL
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEAL 371
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCY 174
LF++M+ + T+ L+ A N L+ K HC ++ G V ++L+ Y
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G + +A R+ ++ K+ V WN+++ Y H + EA+++F M D+ +
Sbjct: 432 AKCGRI-QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISF 490
Query: 235 ASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
+L+A S L G F++ K G + ++ L ++ +G + +
Sbjct: 491 TCVLSA-CSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSR-AGKLEQAYAMIRR 548
Query: 293 IP-QPDLVLWNTMIS 306
+P PD +W ++S
Sbjct: 549 MPVNPDACVWGALLS 563
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 319/580 (55%), Gaps = 39/580 (6%)
Query: 133 TLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+S LI A S ++ L + LHC + + + + L+ CY R G A+++F EM
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 191 GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLASILTAFTSLEDLV 248
E +D VSWNS++ Y + ++ M+ ++G + T S+++A
Sbjct: 93 PE-RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H ++K G + + + I+ Y K +GD+ K+FE++ +LV WNTMI +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGK-TGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q +++ L F RVG+ PD +F+ V+ +C ++ L + IH L + N
Sbjct: 211 LQNG-LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + AL+ +YSK G LED+ +F + ++++ +M+A YA HG G +A++ FE M+
Sbjct: 270 K-CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV 328
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
I P ++TF +L+AC+H+G V EG+ YF M + +P +HYSCM+DLLGR+G L
Sbjct: 329 HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLL 388
Query: 488 TDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIY 530
DA LI+ MP P S + KAA +LEP + YVML+NIY
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIY 448
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
+ASG W++ + IR LM+ +G+ + G S+IE ++H FV D SHP ++I L+E+
Sbjct: 449 SASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIR 508
Query: 591 RKMK-QAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
+KMK + GY KE+ + HSEK+A+AFGLL S EPI++ KNLRIC
Sbjct: 509 KKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRIC 568
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH K IS I R I +RD+ RFH F DG CSC DYW
Sbjct: 569 GDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 140/335 (41%), Gaps = 62/335 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ CV G+ +H L +K V + N FI Y K G L+
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT--------- 186
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
S+ +LF+ + +LVS+NT+I + G E L+ F
Sbjct: 187 ----------------------SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN 224
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R + D T ++ + + + L + +H L ++ GF + +LL YS+ G
Sbjct: 225 MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLG 284
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+++ VF+E+ D ++W +M+ AY H G +A++ F+ MV + D T +L
Sbjct: 285 RLEDSSTVFHEITS-PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLL 343
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG------------SGLIDLYAKCSGDMRDC 286
A + H+ L++ G H + S ++DL + SG ++D
Sbjct: 344 NACS-----------HSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR-SGLLQDA 391
Query: 287 MKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALG 320
+ +E+P +P +W ++ Y D LG
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGAC---RVYKDTQLG 423
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 215/658 (32%), Positives = 353/658 (53%), Gaps = 45/658 (6%)
Query: 58 NQT-QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
NQT + +++ N L+ Y++ + AR+LFD++ Q ++VS++ L+ Y G+ L
Sbjct: 53 NQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVL 112
Query: 117 SLFKDM--REKRFDTDG-FTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
LF+++ + + + FT+ A S + KQ H + G + V N+L+
Sbjct: 113 GLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHM 172
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
YSR +D A ++ + D S+NS++ A + EA Q+ + MV + D T
Sbjct: 173 YSRCFHVDSAMQIL-DTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVT 231
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L + DL GLQ HA L+K+G + + S LID Y KC G++ + K F+ +
Sbjct: 232 YVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKC-GEVLNARKQFDGL 290
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
++V W +++ Y Q + ++ L F K+ P++ +F +++AC++L + + G
Sbjct: 291 RDRNVVAWTAVLTAYLQNGHF-EETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYG 349
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+H + + N + V NAL+ MYSK GN++ + +F M + ++ N+MI GY+
Sbjct: 350 DLLHGRIVMSGFK-NHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSH 408
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG+G +AL +F+ M+ P +TF+ VLSAC H V EG YF + F EP E
Sbjct: 409 HGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLE 468
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMP---------------------FNPGSIALKAANH 511
HY+CM+ LLGRAG L +AE ++ +N G +
Sbjct: 469 HYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGK---QITET 525
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
+Q++P + Y +L+N++A + KW+ V IR+LM++R ++K+PG SW++++ HVFV+
Sbjct: 526 VIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVS 585
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
E +HP +I ++++ +K GY PD KE L HHSEKLA+A+GL
Sbjct: 586 EGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGL 645
Query: 620 LSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ PI ++KNLR+C DCH A+K IS R I VRD RFH F++G C+C D+W
Sbjct: 646 MKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 169/402 (42%), Gaps = 71/402 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL C RDL G +HA LK + F ++S+ I Y KCG + A F+
Sbjct: 231 TYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV ++ +L AY + G E L+LF
Sbjct: 291 RDRNVVAWTAVLTAYLQN-------------------------------GHFEETLNLFT 319
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + FT + L+ A ++ + L LH + GF ++ V N+L+ YS++G
Sbjct: 320 KMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSG 379
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D + VF M +D ++WN+M+ Y H G +AL +FQ+M+S + T +L
Sbjct: 380 NIDSSYNVFSNMMN-RDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVL 438
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A H L++ GF+ I MK F+ +P L
Sbjct: 439 SACV-----------HLALVQEGFYYFDQI------------------MKKFD--VEPGL 467
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHA 357
+ M++ + D+A K +V + D ++ +++AC + + +LGKQI
Sbjct: 468 EHYTCMVALLG-RAGLLDEAENFMKTTTQVKW--DVVAWRTLLNACHIHRNYNLGKQITE 524
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
I+++ + + L M++K + ++ M E N
Sbjct: 525 TVIQMD--PHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERN 564
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/550 (38%), Positives = 313/550 (56%), Gaps = 43/550 (7%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
++ L+ Y+ G L A++VF E +K+ WN+++ A G EAL +M L
Sbjct: 110 LSTRLIEAYAALGALPAARQVFDET-PVKNIFVWNALLKALALADHGDEALARLADMGRL 168
Query: 226 QLGLDMYTL-----ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
+ +D Y+ A I + + + HAH I+ G+ ++H+ + LID YAK
Sbjct: 169 GVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKL- 227
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFV 338
G +R VF +P+ ++V W+ MI Y++ E +D A+ FK + + P+ + V
Sbjct: 228 GIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPAD-AIELFKDMMASDADLVPNSITIV 286
Query: 339 CVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP- 396
V++AC+ ++ S GK +HA ++ S +SV NAL+AMY +CG LE R +F +
Sbjct: 287 SVLNACAGVNALSHGKLLHAYILRRGFDS-LVSVLNALMAMYMRCGCLEVGRHIFKWIGH 345
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ VS NS+I+GY HG G EA+++FE M+ P+ ITF+SVL AC+H G V EG+
Sbjct: 346 RRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKM 405
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----GSI------- 504
F M + +G P EHY+CM+DLLGRAG+L +A LI +M P G++
Sbjct: 406 LFESMVE-YGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIH 464
Query: 505 -----ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
A A +H LEP NA YV+LA+IYA + +V ++ L+ + ++K G SW
Sbjct: 465 GHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGCSW 524
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLV 607
IEVKK++H F + D +P ++++ + E +MK GYVPD KE+ L+
Sbjct: 525 IEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERILI 584
Query: 608 HHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFK 667
HSEKLAVAFGL++T GE I + KNLR+C DCH+ KFIS REI VRD RFH F+
Sbjct: 585 GHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHHFR 644
Query: 668 DGRCSCGDYW 677
DG CSCGDYW
Sbjct: 645 DGVCSCGDYW 654
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 21/293 (7%)
Query: 30 VPFSAYLSNHFILLYSKCGCLSAAH------------HAFNQTQHANVFSFNVLLAAYAR 77
VP +Y H + C +SA+H HA + + L+ YA+
Sbjct: 170 VPVDSYSYTHGL---KACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAK 226
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD--TDGFTLS 135
+ A +F +P+ ++VS++ +I YA A+ LFKDM D + T+
Sbjct: 227 LGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIV 286
Query: 136 GLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
++ A + N L K LH + GFD SV N+L+ Y R G L+ + +F +G
Sbjct: 287 SVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHR 346
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D VSWNS++ YG H G EA+Q+F+EM+ + + T S+L A + + G
Sbjct: 347 RDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKML 406
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+++ G + + ++DL + +G + + M++ + +P +W ++
Sbjct: 407 FESMVEYGVTPRAEHYACMVDLLGR-AGQLDEAMELIRSMHIEPSPQVWGALL 458
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C G L GK LHA L+ + N + +Y +CGCL H F
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 61 QH-ANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESA 115
H +V S+N L++ Y A Q+F+++ P ++++ +++ A + G
Sbjct: 344 GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEG 403
Query: 116 LSLFKDMRE 124
LF+ M E
Sbjct: 404 KMLFESMVE 412
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 288/511 (56%), Gaps = 35/511 (6%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
+N M+ AY + L++EM + + + + ++ + + L+GGLQ HA ++
Sbjct: 136 YNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARIL 195
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+ G ++ + + L+DLY+ C + KVF+EIPQ D V WN +IS D A
Sbjct: 196 RDGHQSDNLLLTTLMDLYS-CCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRD-A 253
Query: 319 LGCFKKLNRV--GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
L F + G+ PDD + + ++ AC+NL G+++H I+ +++ N+L
Sbjct: 254 LRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNY-IEEHGYDGALNLCNSL 312
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+ MYS+CG LE A +F RM E N VS ++MI+G+A HG G EA+ FE M + + P +
Sbjct: 313 ITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDD 372
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
T VLSAC+H G V +G +F M +FG EP HY CM+DLLGRAG L A +LI
Sbjct: 373 QTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIM 432
Query: 496 AMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
+M P S + + H ++L+ A YV+L NIY++ G W++
Sbjct: 433 SMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDK 492
Query: 539 VATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGY 598
V +R+ M+++G+Q PG S IE+K ++H FV +D HP EI+ L+E+ +++K AGY
Sbjct: 493 VTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGY 552
Query: 599 VP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKF 646
V +K RL +HSEKLA+AFG+L+T G I V KNLRIC DCHN K
Sbjct: 553 VAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKV 612
Query: 647 ISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+S RE+ +RD RFH F++G+CSC YW
Sbjct: 613 LSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 129/251 (51%), Gaps = 7/251 (2%)
Query: 251 LQFHAHLIKSGFHQNSHIGSGLIDLYA-KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
LQ HAH+I++ QN I + A S DM +VF +I +P +N MI YS
Sbjct: 85 LQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYS 144
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK-QIHALTIKIEIRSNR 368
+Q ++++ R G P+ S V+ +C +S +G QIHA ++ +S+
Sbjct: 145 MSHS-PEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDN 203
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
+ + L+ +YS C E+A ++FD +P+ +TVS N +I+ + +ALR+F+ M
Sbjct: 204 LLL-TTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQS 262
Query: 429 T--NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
T P ++T + +L ACA+ G + G++ + +++ G++ + +I + R G+
Sbjct: 263 TADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEE-HGYDGALNLCNSLITMYSRCGR 321
Query: 487 LTDAERLIEAM 497
L A + + M
Sbjct: 322 LEKAYSIFKRM 332
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 6/278 (2%)
Query: 33 SAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP 92
S+++ I + S G L ++ L+ Y+ + A ++FD+IP
Sbjct: 171 SSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIP 230
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKR--FDTDGFTLSGLITASSN--NLCLI 148
Q D VS+N LIS T AL +F M+ F+ D T L+ A +N L
Sbjct: 231 QWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFG 290
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H G+D ++ NSL+T YSR G L++A +F M E ++ VSW++M+ +
Sbjct: 291 ERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDE-RNVVSWSAMISGFAM 349
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSH 267
H G EA++ F++M L + D TL +L+A + + GL F + K G N H
Sbjct: 350 HGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIH 409
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
++DL + + + + +PD LW T++
Sbjct: 410 HYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLL 447
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 21/277 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y+R R+ A +F ++ + ++VS++ +IS +A G A+ F+ M++
Sbjct: 310 NSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVS 369
Query: 129 TDGFTLSGLITASS------NNLCLIKQL-HCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
D TL+G+++A S + L ++ I HY + + L R G LD
Sbjct: 370 PDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLL----GRAGLLD 425
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL--QLGLDMYTLASILT 239
+A ++ M D W +++ A HR ++ ++ L Q D L +I +
Sbjct: 426 QAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYS 485
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM---KVFEEIPQP 296
+ + + + +F + + G + G I+L K + D + + E
Sbjct: 486 SVGNWDKVTDLRKF---MKEKGIQTSP--GCSTIELKGKVHEFVVDDILHPRTDEIYEML 540
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
D + I+GY + LG +K NR+ YH +
Sbjct: 541 DEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSE 577
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 191/512 (37%), Positives = 306/512 (59%), Gaps = 35/512 (6%)
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAF 241
A +VF ++ + + WN+++ Y + + A L++EM VS + D +T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T++ D+ G H+ +I+SGF ++ + L+ LYA C GD+ KVF+++P+ DLV W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAW 190
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N++I+G+++ + ++AL + ++N G PD + V ++SAC+ + +LGK++H I
Sbjct: 191 NSVINGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ + N + +N L+ +Y++CG +E+A+ LFD M + N+VS S+I G A +G G EA+
Sbjct: 250 KVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 421 RLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LF++M T + P ITFV +L AC+H G V EG +YF M++ + EP EH+ CM+D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
LL RAG++ A I++MP P + + A LQLEP+++
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA+ +W +V IR+ M GV+K PG S +EV ++H F+ D SHP I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 583 HNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+EM+ +++ GYVP +KE +V+HSEK+A+AF L+ST PI V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
+KNLR+C DCH AIK +S + REI VRD R
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 65/350 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ ++K D+ G+++H++ +++ Y+ N + LY+ CG
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------ 170
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ASA ++FD++P+ DLV++N++I+ +A+ G E AL+L+
Sbjct: 171 -------------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K DGFT+ L++A + L L K++H I G +N LL Y+R G
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD-MYTLASI 237
++EAK +F EM + K+ VSW S++V + G EA++LF+ M S + L T I
Sbjct: 272 RVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMR 284
L A + H ++K GF + H G ++DL A+ +G ++
Sbjct: 331 LYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGC-MVDLLAR-AGQVK 377
Query: 285 DCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+ + +P QP++V+W T++ + + D L F ++ + P+
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTV---HGDSDLAEFARIQILQLEPN 424
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 315/560 (56%), Gaps = 37/560 (6%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLH I GF+ V + L+ YS+ + ++F K +W+S++ ++ Q+
Sbjct: 28 QLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPH-KSATTWSSVISSFAQN 86
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
L AL+ F+ M+ L D +TL + + +L L L HA +K+ H + +G
Sbjct: 87 DLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVG 146
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
S L+D YAKC GD+ KVF+E+P ++V W+ MI GYSQ ++AL FK+
Sbjct: 147 SSLVDTYAKC-GDVNLARKVFDEMPHKNVVSWSGMIYGYSQMG-LDEEALNLFKRALEQD 204
Query: 330 Y--HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
Y +D + V+ CS + LGKQ+H L K S+ V ++L+++YSKCG +E
Sbjct: 205 YDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCF-VASSLISLYSKCGVVE 263
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
++F+ + N N+M+ AQH LFE M + P ITF+ +L AC+
Sbjct: 264 GGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACS 323
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP----- 501
H G V +G+ F +MK+ G EP +HY+ ++DLLGRAGKL +A +I+ MP P
Sbjct: 324 HAGLVEKGEHCFGLMKE-HGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVW 382
Query: 502 ----------GSIALKA--ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
G+ L + A+ ++ ++ V+L+N YAA+G+WEE A R++MRD+
Sbjct: 383 GALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQ 442
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------- 601
G++K+ G SW+E ++H F A D SH +EI+ LEE+ +M +AGYV D
Sbjct: 443 GIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEV 502
Query: 602 ----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITV 657
K + + +HSE+LA+AFGL++ PI VMKNLR+CGDCH AIKFIS GR I V
Sbjct: 503 DGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIV 562
Query: 658 RDTYRFHCFKDGRCSCGDYW 677
RD RFH F+DG+C+CGDYW
Sbjct: 563 RDNNRFHRFEDGKCTCGDYW 582
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 11/399 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y++ S+ +LFD P +++++IS++A AL F+ M D
Sbjct: 48 LINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPD 107
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASV--NNSLLTCYSRNGFLDEAKRVFY 188
TL + + L L A+ H+ V +SL+ Y++ G ++ A++VF
Sbjct: 108 DHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFD 167
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQLGLDMYTLASILTAFTSLED 246
EM K+ VSW+ M+ Y Q EAL LF+ + + ++ +TL+S+L ++
Sbjct: 168 EMPH-KNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTL 226
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
G Q H K+ F + + S LI LY+KC G + KVFEE+ +L +WN M+
Sbjct: 227 FELGKQVHGLCFKTSFDSSCFVASSLISLYSKC-GVVEGGYKVFEEVKVRNLGMWNAMLI 285
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS 366
+Q ++ + F+++ RVG P+ +F+C++ ACS+ + + K H + E
Sbjct: 286 ACAQ-HAHTGRTFELFEEMERVGVKPNFITFLCLLYACSH-AGLVEKGEHCFGLMKEHGI 343
Query: 367 NRISVNNA-LVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIGMEALRLFE 424
S + A LV + + G LE+A + MP T S+ +++ G HG A + +
Sbjct: 344 EPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVAD 403
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+ E + I V + +A A G+ E + MM+D
Sbjct: 404 KVFEMGAVSSGIQ-VLLSNAYAAAGRWEEAARARKMMRD 441
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 134/252 (53%), Gaps = 7/252 (2%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +VF + L+ YA+ + AR++FD++P ++VS++ +I Y+ G E AL+LFK
Sbjct: 139 HHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFK 198
Query: 121 DMREKRFD--TDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
E+ +D + FTLS + + ++S L KQ+H L FD V +SL++ YS+
Sbjct: 199 RALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSK 258
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ +VF E+ ++++ WN+M++A QH +LF+EM + + + T
Sbjct: 259 CGVVEGGYKVFEEV-KVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLC 317
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+L A + + G + + G S + L+DL + +G + + + V +E+P Q
Sbjct: 318 LLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGR-AGKLEEAVLVIKEMPMQ 376
Query: 296 PDLVLWNTMISG 307
P +W +++G
Sbjct: 377 PTESVWGALLTG 388
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D + +L FT L GLQ H +IK GF + LI+ Y+K + +K+
Sbjct: 6 DCRDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSK-TNLPHSSLKL 64
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
F+ P W+++IS ++Q + AL F+++ R G PDD + + + LS
Sbjct: 65 FDSFPHKSATTWSSVISSFAQN-DLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSS 123
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+ + V ++LV Y+KCG++ AR++FD MP N VS + MI G
Sbjct: 124 LPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYG 183
Query: 410 YAQHGIGMEALRLFEWMLET--NIPPTNITFVSVLSACA 446
Y+Q G+ EAL LF+ LE +I + T SVL C+
Sbjct: 184 YSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCS 222
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 37/209 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C GK +H L K S ++++ I LYSKCG + + F +
Sbjct: 213 TLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEV 272
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+ N+ +N +L A A+ +LF+++ +P+ +++ L+ A + G E
Sbjct: 273 KVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGE 332
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F M+E I G HYA +L+ R
Sbjct: 333 HCFGLMKEH-----------------------------GIEPGSQHYA----TLVDLLGR 359
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
G L+EA V EM E W +++
Sbjct: 360 AGKLEEAVLVIKEMPMQPTESVWGALLTG 388
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 313/555 (56%), Gaps = 40/555 (7%)
Query: 159 GFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQL 218
G D + L+ Y G +D A +VF E E K WN++ A G + L L
Sbjct: 104 GLDQDPYLATKLINMYCDLGSVDHACKVFDETRE-KTIFVWNAIFRALAMASRGEDLLVL 162
Query: 219 FQEMVSLQLGLDMYTLASILTAFT----SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLID 274
+ +M + + + +T +L A S+ L G + HAH+++ G+ + H+ + L+D
Sbjct: 163 YGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLD 222
Query: 275 LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK--KLNRVGYHP 332
+YA+ G + VF +P ++V W+ MI+ Y+ K E +AL F+ L P
Sbjct: 223 VYAR-FGYVSYASSVFGAMPDKNIVSWSAMIACYA-KNEMPMKALELFQIMMLEACDTVP 280
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
+ + V V+ AC++L+ GK +HA ++ + S + V N L+ MY +CG + +R+
Sbjct: 281 NPITMVSVLQACASLAALEHGKLVHAYVLRRGLDST-LPVLNTLITMYGRCGEISTGQRV 339
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
FD M + + +S NS+I+ Y HG+G +A+++FE M+ + P+ ITF++VL AC+H G V
Sbjct: 340 FDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLV 399
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG--------- 502
E + F M + + P EHY+CM+D+LGRA +L +A LI+ M F PG
Sbjct: 400 EEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLG 459
Query: 503 --------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
+A +A+ +LEP NA YV+L++IYA S W +V +R+ + RG+QK
Sbjct: 460 SCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKI 519
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DK 602
P SWIEVK++++ V+ + +P I+E+ +L + ++K GYVP +K
Sbjct: 520 PSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEK 579
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
E+ ++ HS KLAVAFGL++TS GE I + NLR+C DCH +KF+S REI +RD R
Sbjct: 580 ERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNR 639
Query: 663 FHCFKDGRCSCGDYW 677
FHCFKDG CSCGDYW
Sbjct: 640 FHCFKDGVCSCGDYW 654
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 125/258 (48%), Gaps = 10/258 (3%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H +V LL YAR ++ A +F +P ++VS++ +I+ YA
Sbjct: 204 HILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMK 263
Query: 115 ALSLFKDMREKRFDT--DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSL 170
AL LF+ M + DT + T+ ++ A ++ L K +H + G D V N+L
Sbjct: 264 ALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTL 323
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+T Y R G + +RVF M + +D +SWNS++ YG H G +A+Q+F+ M++ +
Sbjct: 324 ITMYGRCGEISTGQRVFDYMKK-RDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPS 382
Query: 231 MYTLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
T ++L A S LV + F + L K H + ++D+ + + + + ++
Sbjct: 383 YITFITVLCA-CSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGR-ANRLDEAIE 440
Query: 289 VFEEIP-QPDLVLWNTMI 305
+ + + +P +W +++
Sbjct: 441 LIQNMDFKPGPTVWGSLL 458
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C L GK +HA L+ + + + N I +Y +CG +S F+
Sbjct: 284 TMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM 343
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+ +V S+N L++ Y A Q+F+ + P +++ T++ A + G E A
Sbjct: 344 KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403
Query: 117 SLFKDMREK 125
LF+ M K
Sbjct: 404 ILFESMLNK 412
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 13 RDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC--------------GCLSAAHHAFN 58
+++V+ ++ A Y KN +P A L I++ C C S A
Sbjct: 243 KNIVSWSAMIACYAKNEMPMKA-LELFQIMMLEACDTVPNPITMVSVLQACASLAALEHG 301
Query: 59 QTQHANVFS---------FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+ HA V N L+ Y R I++ +++FD + + D++S+N+LIS Y
Sbjct: 302 KLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMH 361
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSN-------NLCLIKQLHCLAIYCGFDH 162
G + A+ +F++M + T ++ A S+ + L+ I+ +H
Sbjct: 362 GLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEH 421
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
YA + + L R LDEA + M W S++
Sbjct: 422 YACMVDIL----GRANRLDEAIELIQNMDFKPGPTVWGSLL 458
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 330/602 (54%), Gaps = 37/602 (6%)
Query: 109 CGDTESALSLFK--DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYA 164
C A+ LF+ ++ FD G T L++A ++ +K++ + GF+
Sbjct: 93 CNRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDL 152
Query: 165 SVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS 224
V N +L + + G + +A+++F EM E KD SW +M+ + EA LF M
Sbjct: 153 YVMNRVLFVHVKCGLMLDARKLFDEMPE-KDMASWMTMIGGFVDSGNFSEAFGLFLCMWE 211
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
T +++ A L + G Q H+ +K G ++ + LID+Y+KC G +
Sbjct: 212 EFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKC-GSIE 270
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
D VF+++P+ V WN++I+ Y+ YS++AL + ++ G D + VI C
Sbjct: 271 DAHCVFDQMPEKTTVGWNSIIASYAL-HGYSEEALSFYYEMRDSGAKIDHFTISIVIRIC 329
Query: 345 SNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ L S KQ HA ++ ++ I N ALV YSK G +EDA +F+RM N +S
Sbjct: 330 ARLASLEYAKQAHAALVRRGYDTD-IVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISW 388
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N++IAGY HG G EA+ +FE ML + P ++TF++VLSAC+++G G + F M
Sbjct: 389 NALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 448
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
+P HY+CM++LLGR G L +A LI + PF P + +
Sbjct: 449 DHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGK 508
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA + +EP Y++L N+Y +SGK +E A + + ++ +G++ P +WIEVKKQ
Sbjct: 509 LAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQS 568
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV-------PD---KEKRLV-HHSEKLAV 615
+ F+ D SH KEI+ + M ++ + GYV PD +E+R++ +HSEKLA+
Sbjct: 569 YAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQRILKYHSEKLAI 628
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
AFGL++T + P+ + + R+CGDCH+AIKFI+ + GREI VRD RFH F+DG CSCGD
Sbjct: 629 AFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGD 688
Query: 676 YW 677
YW
Sbjct: 689 YW 690
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 168/359 (46%), Gaps = 47/359 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +++ G + G+ +H+ LK V ++S I +YSKCG + AH
Sbjct: 220 TFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAH------ 273
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+FDQ+P+ V +N++I++YA G +E ALS +
Sbjct: 274 -------------------------CVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYY 308
Query: 121 DMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR+ D FT+S +I A +L KQ H + G+D N +L+ YS+ G
Sbjct: 309 EMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWG 368
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A VF M K+ +SWN+++ YG H +G EA+++F++M+ + + T ++L
Sbjct: 369 RMEDAWHVFNRMRR-KNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVL 427
Query: 239 TA--FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A ++ L + G F++ + + +++L + G + + ++ P +
Sbjct: 428 SACSYSGLSER-GWEIFYSMSRDHKVKPRAMHYACMVELLGR-EGLLDEAYELIRSAPFK 485
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD-CSFVCVISACSNLSPSLGK 353
P +W T+++ E + LG N G P+ C+++ ++ NL S GK
Sbjct: 486 PTTNMWATLLTACRMHE---NLELGKLAAENLYGMEPEKLCNYIVLL----NLYNSSGK 537
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 327/623 (52%), Gaps = 60/623 (9%)
Query: 31 PFSA--YLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLF 88
PF+ +L N + Y++ G L A F+ H N FS+N LL+A AR R A LF
Sbjct: 45 PFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALF 104
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLC-- 146
IP PD SYN +++A A G AL M F + ++ + ++A ++
Sbjct: 105 GAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASR 164
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
+Q+H L + +L+ Y++ +EA++VF M E ++ VSWNS++ Y
Sbjct: 165 TGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPE-RNIVSWNSLITCY 223
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG-FHQN 265
Q+ EAL LF M+ D TLAS+++A L G Q H ++KS F ++
Sbjct: 224 EQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFRED 283
Query: 266 SHIGSGLIDLYAKC------------------------------SGDMRDCMKVFEEIPQ 295
+ + L+D+YAKC S ++ D VF ++ +
Sbjct: 284 MVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVE 343
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQ 354
++V WN +I+ Y+ E ++AL F +L R P ++ V++AC+NL+ LG+Q
Sbjct: 344 KNVVAWNVLIATYAHNSE-EEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQ 402
Query: 355 IHALTIKIEIR-----SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
H +K R + + V N+LV MY K G++ D ++F+RM + VS N+MI G
Sbjct: 403 AHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVG 462
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YAQ+G +AL LFE ML +N P ++T + VLSAC H+G V EG++YF M + G P
Sbjct: 463 YAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIP 522
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHF 512
+HY+CMIDLLGRAG L + E LIE MP P ++ AA
Sbjct: 523 TRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKL 582
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
+L+P N+ PYV+L+N+YA GKW +V +RR M+ RGV K+PG SWIE+ ++++VF+A
Sbjct: 583 FELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLAR 642
Query: 573 DGSHPMIKEIHNYLEEMSRKMKQ 595
D HP EIH+ L + +M +
Sbjct: 643 DNIHPCRNEIHDTLRIIQMQMSR 665
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 219/484 (45%), Gaps = 37/484 (7%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L C + TG+ +HAL K+ Y+ + +Y+KC A F+
Sbjct: 149 SFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAM 208
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
N+ S+N L+ Y + + A LF ++ + PD V+ +++SA A
Sbjct: 209 PERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGR 268
Query: 117 SLFKDM-REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYA--SV--NNSLL 171
+ M + RF D + L+ + K C FD A SV S++
Sbjct: 269 QVHTRMVKSDRFREDMVLNNALVDMYA------KCGRTWEAKCVFDRMAIRSVVSETSMI 322
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
T Y+++ + +A+ VF +M E K+ V+WN ++ Y + E EAL+LF + +
Sbjct: 323 TGYAKSANVGDAQAVFLQMVE-KNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTH 381
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS------HIGSGLIDLYAKCSGDMRD 285
YT ++L A +L +L G Q H H++K GF +S +G+ L+D+Y K +G + D
Sbjct: 382 YTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLK-TGSISD 440
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC- 344
KVFE + D V WN MI GY+Q D AL F+++ PD + + V+SAC
Sbjct: 441 GAKVFERMAARDNVSWNAMIVGYAQNGRAKD-ALLLFERMLCSNERPDSVTMIGVLSACG 499
Query: 345 -SNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVS 402
S L + ++T I R ++ + + G+L++ L + MP E + V
Sbjct: 500 HSGLVKEGRRYFQSMTEDHGIIPTRDHY-TCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 403 LNSMIAGYAQHGIGMEALRLFEW----MLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
S++ H + + + EW + E + P + +V + + A GK A+ +
Sbjct: 559 WASLLGACRLH----KNIDMGEWAAGKLFELD-PDNSGPYVLLSNMYAELGKWADVFRVR 613
Query: 459 SMMK 462
MK
Sbjct: 614 RSMK 617
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/649 (32%), Positives = 348/649 (53%), Gaps = 71/649 (10%)
Query: 97 VSYNTLISAY-ADCGDTESALSLFKDMREKR--FDTDGFTLSGLITASSNNLCLIKQLHC 153
+ +N+ + + + G L +FK++ K FD++ ++++ ++ L ++H
Sbjct: 488 LKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHG 547
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
I GFD + +L+ Y R L++A +VF+EM + + WN ++ Q +
Sbjct: 548 CLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN-PEALLWNEAIILNLQSEKLQ 606
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTA-FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
+ ++LF++M L + T+ +L A + L L G + H +++++GF + ++G+ L
Sbjct: 607 KGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 666
Query: 273 IDLYAK------------------------------CSGDMRDCMKVFEEIPQ----PDL 298
ID+Y K G D +++ ++ + PDL
Sbjct: 667 IDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL 726
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN MISGY+ +AL F ++ + G P+ S C++ AC++LS GK+IH
Sbjct: 727 VTWNGMISGYAM-WGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHC 785
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L+I+ + + V AL+ MYSK +L++A ++F R+ S N MI G+A G+G
Sbjct: 786 LSIRNGFIED-VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 844
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EA+ +F M + + P ITF ++LSAC ++G + EG KYF M + P EHY CM
Sbjct: 845 EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM 904
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNA 520
+DLLGRAG L +A LI MP P + A AA + +LEP+N+
Sbjct: 905 VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNS 964
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y+++ N+Y+ +WE++ +R LM GV+ + +SWI++ +++HVF +++ HP
Sbjct: 965 ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 1024
Query: 581 EIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPI 628
+I+ L ++ +MK+ GYVPD K+K L+ H+EKLA+ +GL+ GEPI
Sbjct: 1025 KIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPI 1084
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KN RIC DCH+A K+IS + RE+ +RD RFH F++G+CSC D+W
Sbjct: 1085 RVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 8/314 (2%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLE-ALQLFQEMVSLQ 226
+L++ Y G A VFY +G ++ + WNS V + L L++F+E+
Sbjct: 460 KNLISSYLGFGDFWSAAMVFY-VGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 518
Query: 227 LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ D + L T + D+ G++ H LIK GF + ++ L++ Y +C G +
Sbjct: 519 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG-LEKA 577
Query: 287 MKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-S 345
+VF E+P P+ +LWN I Q E+ + + F+K+ + + V V+ A S
Sbjct: 578 NQVFHEMPNPEALLWNEAIILNLQSEKLQ-KGVELFRKMQFSFLKAETATIVRVLQASIS 636
Query: 346 NLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L ++GK+ H ++ + + V +L+ MY K +L A+ +FD M N + N
Sbjct: 637 ELGFLNMGKETHGYVLRNGFDCD-VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWN 695
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
S+++GY+ G+ +ALRL M + I P +T+ ++S A G E +F+ M+
Sbjct: 696 SLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE 755
Query: 465 FGFEPEGEHYSCMI 478
G P +C++
Sbjct: 756 -GVMPNSASITCLL 768
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 44/207 (21%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+ C L GK +H L ++N +++ I +YSK L AH
Sbjct: 767 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH---------- 816
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
++F +I L S+N +I +A G + A+S+F +M++
Sbjct: 817 ---------------------KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQK 855
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQ--------LHCLAIYCGFDHYASVNNSLLTCYSR 176
D T + L++A N+ LI + + I +HY + + L R
Sbjct: 856 VGVGPDAITFTALLSACKNS-GLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLL----GR 910
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMV 203
G+LDEA + + M D W +++
Sbjct: 911 AGYLDEAWDLIHTMPLKPDATIWGALL 937
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 316/559 (56%), Gaps = 55/559 (9%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+Q+H + G+ + L+ Y+R G L++A+ V M E ++ VSW +M+ Y Q
Sbjct: 55 RQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPE-RNVVSWTAMISGYSQ 113
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ +A +LF M L+ G+ Q HA +K+ F + +
Sbjct: 114 NERPDQAWELFIMM--LRAGIHQVK------------------QVHAFAVKTNFELHMFV 153
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
GS L+D+YAK S ++++ +VF+ +P D+V + ++SGY+Q ++AL F+ L
Sbjct: 154 GSSLLDMYAK-SENIQEARRVFDMLPARDVVSYTAILSGYTQLG-LDEEALDLFRLLYNE 211
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G + +F +++A S LS GKQ+H L ++ E+ +++ N+L+ MYSKCG L
Sbjct: 212 GMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRREL-PFFMALQNSLIDMYSKCGKLLY 270
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+RR+FD MPE + VS N+M+ GY +HG+ E ++LF M + + P ++T ++VLS +H
Sbjct: 271 SRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSH 329
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP-----G 502
G V EG F + EHY C+IDLLGR+G+L A LIE MPF P G
Sbjct: 330 GGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWG 389
Query: 503 S------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
S + A L +EP NA YV+L+NIYAA+G W++V +R+LM +
Sbjct: 390 SLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKT 449
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--------- 601
V K+PG SW+ + K +H F + + HP ++I+ ++E+ +K AG+VPD
Sbjct: 450 VIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVD 509
Query: 602 ---KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
KE+ L+ HSEKLA+ FGL+ST I VMKNLRIC DCHN KF+S + GREI++R
Sbjct: 510 DEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLR 569
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFH +G C+CGDYW
Sbjct: 570 DKNRFHLITEGACTCGDYW 588
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 165/361 (45%), Gaps = 59/361 (16%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ + CV RR L G+ +HA + + YL+ +++Y++CG L A + +
Sbjct: 38 YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97
Query: 62 HANVFSFNVLLAAYARQLR----------------------------------------- 80
NV S+ +++ Y++ R
Sbjct: 98 ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSL 157
Query: 81 ---------IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDG 131
I AR++FD +P D+VSY ++S Y G E AL LF+ + + +
Sbjct: 158 LDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQ 217
Query: 132 FTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYE 189
T + L+ A S +++ KQ+H L + + ++ NSL+ YS+ G L ++RVF
Sbjct: 218 VTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDS 277
Query: 190 MGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG 249
M E + VSWN+M++ YG+H E +QLF+ M ++ D TL ++L+ ++ +
Sbjct: 278 MPE-RSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSHGGLVDE 335
Query: 250 GLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
GL H++K S H G +IDL + SG ++ + + E++P QP +W +++
Sbjct: 336 GLDMFDHIVKEQSTLLNTEHYGC-VIDLLGR-SGQLQKALNLIEKMPFQPTRAIWGSLLG 393
Query: 307 G 307
Sbjct: 394 A 394
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L G + GK +H L L+ +PF L N I +YSKCG L + F+
Sbjct: 219 TFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSM 278
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +L Y R QLF D++ +PD V+ ++S Y+ G + L
Sbjct: 279 PERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEV-KPDSVTLLAVLSGYSHGGLVDEGL 337
Query: 117 SLF 119
+F
Sbjct: 338 DMF 340
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 349/707 (49%), Gaps = 89/707 (12%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+LK C G+ LH KN ++ N + +Y KCGCL
Sbjct: 94 LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCL-------------- 139
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
SAR +FDQ+P+ D+VS+ T++ Y AL L ++M+
Sbjct: 140 -----------------VSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQF 182
Query: 125 KRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHY--ASVNNSLLTCYSRNGFL 180
G L LI N L + + +H + D S+ +L+ Y + G L
Sbjct: 183 VGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCL 242
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+R+F + + + VSW M+ + E + F M+ +L + TL S++T
Sbjct: 243 ASAQRLFDRLSK-RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITE 301
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L G FHA+L+++GF + + + LID+Y KC G + +F + + D+ +
Sbjct: 302 CGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKC-GQVGYARALFNGVKKKDVKI 360
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALT 359
W+ +IS Y+ DQ F ++ P++ + V ++S C+ LGK HA
Sbjct: 361 WSVLISAYAHVS-CMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYI 419
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
+ + + I + AL+ MY+KCG++ AR LF+ + + N+M+AG++ HG G EA
Sbjct: 420 NRHGLEVDVI-LETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEA 478
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L LF M + P +ITFVS+ AC+H+G + EHY C++D
Sbjct: 479 LELFSEMESHGVEPNDITFVSIFHACSHSGLM--------------------EHYGCLVD 518
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSI-------ALK----------AANHFLQLEPSNAVP 522
LLGRAG L +A +IE MP P +I A K AA L+L+P N
Sbjct: 519 LLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGY 578
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
V+ +NIYA++ +W +V ++R M G++K+PG SWIEV +H F + D + ++
Sbjct: 579 SVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKV 638
Query: 583 HNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ + EM K++++GY P +KE L +HSEKLA AFGL+ST+ G PI +
Sbjct: 639 YEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRI 698
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLRIC DCH A K +S I GR I VRD RFH F +G CSC YW
Sbjct: 699 VKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 147/314 (46%), Gaps = 6/314 (1%)
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTLASILTAFTSLE 245
F+ E ++N ++ +Y + + + M S LD + L S+L A
Sbjct: 43 FFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQAS 102
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
G + H K+GF + + + L+++Y KC G + VF+++P+ D+V W TM+
Sbjct: 103 SGDLGRELHGFAQKNGFASDVFVCNALMNMYEKC-GCLVSARLVFDQMPERDVVSWTTML 161
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIK-IE 363
Y + + + +AL +++ VG + + +I+ N L G+ +H ++ +
Sbjct: 162 GCYVRSKAFG-EALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVG 220
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+S+ AL+ MY K G L A+RLFDR+ + + VS MIAG + E + F
Sbjct: 221 DEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNF 280
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
MLE + P IT +S+++ C G + G K+F GF + +ID+ G+
Sbjct: 281 NRMLEEKLFPNEITLLSLITECGFVGTLDLG-KWFHAYLLRNGFGMSLALVTALIDMYGK 339
Query: 484 AGKLTDAERLIEAM 497
G++ A L +
Sbjct: 340 CGQVGYARALFNGV 353
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 48/210 (22%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK HA ++ + L I +Y+KCG ++ A FN+
Sbjct: 395 TMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEA 454
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q D+ +NT+++ ++ G + AL LF
Sbjct: 455 M-------------------------------QRDIRMWNTMMAGFSMHGCGKEALELFS 483
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+M + + T + A S++ + +HY L+ R G L
Sbjct: 484 EMESHGVEPNDITFVSIFHACSHSGLM-------------EHYG----CLVDLLGRAGHL 526
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
DEA + M + + W +++ A H+
Sbjct: 527 DEAHNIIENMPMRPNTIIWGALLAACKLHK 556
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 205/578 (35%), Positives = 321/578 (55%), Gaps = 32/578 (5%)
Query: 48 GCLSAAHHAFNQTQHA---------NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVS 98
G A H Q H+ +V++ + LL YA+ R+ A +F +P + VS
Sbjct: 111 GVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVS 170
Query: 99 YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAI 156
+N LI + GD ++A L M+++ + T + L+T + L QLHC I
Sbjct: 171 WNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKII 230
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G + Y ++ N+ LT YS G L++AKRVF +D V+WNSM+VAY H + +A
Sbjct: 231 KHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAF 290
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLY 276
LF EM D+YT +++A + G FHA +IK G ++ I + LI +Y
Sbjct: 291 NLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMY 350
Query: 277 AKCSG-DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
K + M + +F + D V WN++++G+SQ +S+ AL F + DD
Sbjct: 351 LKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMG-FSEDALKLFGHMRSSLEEIDDY 409
Query: 336 SFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
++ V+ +CS+L+ LG+QIH LT+K SN V ++L+ MYSKCG +EDA + F+
Sbjct: 410 AYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDF-VASSLIFMYSKCGIIEDAWKCFED 468
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ ++++ NS++ YAQHG G AL LF M E + ++TFV+VL+AC+H G V +G
Sbjct: 469 TTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQG 528
Query: 455 QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA------ 508
+ M+ +G P EHY+C +DL GRAG L +A+ LI++MPF P ++ LK
Sbjct: 529 RCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACR 588
Query: 509 -----------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF 557
A+ L++EP YV+L+N+Y +W++ A++ RLMR+R V+K PG+
Sbjct: 589 ACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGW 648
Query: 558 SWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQ 595
SWIEVK ++H F AED SHP ++++ L E+ +MK+
Sbjct: 649 SWIEVKNEVHAFKAEDRSHPYSEDVYQILGELMEEMKR 686
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 238/497 (47%), Gaps = 53/497 (10%)
Query: 16 VTGKSLHALY---------LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
V S HALY K+ + Y++N+ + YSKC F
Sbjct: 7 VVESSRHALYNVFLTHCQAFKSGIISHIYVANNILFRYSKC------------------F 48
Query: 67 SFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
S ++ LA +LFD++P D V++NT+I+ Y + G+ +A K M+ +
Sbjct: 49 SGDLNLAC-----------KLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRG 97
Query: 127 FDTDGFT----LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
F DG+T L G+ A ++L +Q+H L + G++ ++LL Y++ +++
Sbjct: 98 FQADGYTFGSILKGVAHACRHDLG--QQVHSLIVKIGYEQSVYAGSALLDMYAKCERVED 155
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A VF M +++ VSWN+++ + Q + A L M + ++ T A +LT
Sbjct: 156 AYDVFQGM-PVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLD 214
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE-EIPQPDLVLW 301
+ +Q H +IK G + + + + Y++C G + D +VF+ + DLV W
Sbjct: 215 GDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSEC-GLLEDAKRVFDGAVGTRDLVTW 273
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTI 360
N+M+ Y ++ D A F ++ G+ PD ++ CVISAC + + GK HAL I
Sbjct: 274 NSMLVAYLVHDKDED-AFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVI 332
Query: 361 KIEIRSNRISVNNALVAMYSKCGN--LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
K + + +++ NAL+ MY K N +E A LF M + VS NS++ G++Q G +
Sbjct: 333 KRGLEES-VTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSED 391
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL+LF M + + + +VL +C+ + GQ+ ++ GF+ S +I
Sbjct: 392 ALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQ-IHLLTVKTGFDSNDFVASSLI 450
Query: 479 DLLGRAGKLTDAERLIE 495
+ + G + DA + E
Sbjct: 451 FMYSKCGIIEDAWKCFE 467
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 215/471 (45%), Gaps = 44/471 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L G + LH +K+ + F L N + YS+CG L A F+
Sbjct: 205 TFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGA 264
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ DLV++N+++ AY E A +LF
Sbjct: 265 ------------------------------VGTRDLVTWNSMLVAYLVHDKDEDAFNLFL 294
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-- 176
+M+ F+ D +T + +I+A ++ + K H L I G + ++ N+L+T Y +
Sbjct: 295 EMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLN 354
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
N ++ A +F+ M + KD VSWNS++ + Q +AL+LF M S +D Y ++
Sbjct: 355 NKSMEAALNLFHSM-KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSA 413
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L + + L L G Q H +K+GF N + S LI +Y+KC G + D K FE+ +
Sbjct: 414 VLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKC-GIIEDAWKCFEDTTKE 472
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+ WN+++ Y+Q + D AL F + D +FV V++ACS++ L +Q
Sbjct: 473 SSITWNSIMFAYAQHGQ-GDVALDLFSIMREREVKLDHVTFVAVLTACSHV--GLVEQGR 529
Query: 357 ALTIKIEIRSN---RISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQ 412
+ +E R+ V ++ + G LE+A+ L D MP + N + L +++
Sbjct: 530 CVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRA 589
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
G A ++ +LE P + T+V + + H + + +M++
Sbjct: 590 CGNIELAAQVASQLLEVE-PEEHCTYVILSNMYGHLKRWDDKASVTRLMRE 639
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 22/339 (6%)
Query: 134 LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NGFLDEAKRVFYEMG 191
L+ ++ +S + L + HC A G + V N++L YS+ +G L+ A ++F EM
Sbjct: 4 LNSVVESSRHALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMP 63
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL--TAFTSLEDLVG 249
KD V+WN+M+ Y + A + + M D YT SIL A DL
Sbjct: 64 H-KDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDL-- 120
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G Q H+ ++K G+ Q+ + GS L+D+YAKC + D VF+ +P + V WN +I G+
Sbjct: 121 GQQVHSLIVKIGYEQSVYAGSALLDMYAKCE-RVEDAYDVFQGMPVRNFVSWNALIDGFV 179
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRI 369
Q + D A + + G +D +F +++ G + + LT+++ + +
Sbjct: 180 QVGD-RDTAFWLLDCMQKEGVRVEDGTFAPLLTLLD------GDKFYKLTMQLHCKIIKH 232
Query: 370 SVN------NALVAMYSKCGNLEDARRLFD-RMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ NA + YS+CG LEDA+R+FD + + V+ NSM+ Y H +A L
Sbjct: 233 GLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNL 292
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
F M P T+ V+SAC G+ + +++
Sbjct: 293 FLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALV 331
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 200/565 (35%), Positives = 313/565 (55%), Gaps = 42/565 (7%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
K++H + CGF + N L+ Y + G L AK VF+ + ++ SW MV A+
Sbjct: 77 KRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFH-ITPRRNVFSWTIMVAAFAH 135
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ ++AL L + M + + T +L A +L L G H + GF + +
Sbjct: 136 NGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFV 195
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ LI++YAKC + D VFE + ++ W +++ Y+ + D AL F +
Sbjct: 196 ANCLINMYAKCRS-LADACSVFESLTSRSVIAWTALVAAYALNGFFRD-ALKVFLLMTLD 253
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN-RISVNNALVAMYSKCGNLE 386
G P + +FV V+ C++++ +G+++H + I+ RS + V NAL+ MY KC + +
Sbjct: 254 GVEPTEVTFVTVVDVCADIAVFGIGREVHGV---IDARSEANVCVGNALINMYGKCASPD 310
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN-----IPPTNITFVSV 441
+AR++FD M + ++ NSMIA Y Q+G G +AL +++ M E+ I +ITF+ V
Sbjct: 311 EARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGV 370
Query: 442 LSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP 501
L AC+H G V + K +S M +GF+P C+IDLLGRAG L +AE I +MP++P
Sbjct: 371 LFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHP 430
Query: 502 GSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRR 544
A +AA+ + L P+++ YV L+N+YA + +W+++A +R+
Sbjct: 431 DHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRK 490
Query: 545 LMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD--- 601
LM RGV K G S IE+ +H F+A D SHP +EI+ L + +++ GYVPD
Sbjct: 491 LMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKA 550
Query: 602 ---------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAG 652
KEK HSE+LA+AFG++S+ G + +MKNLR+C DCH+A K IS +G
Sbjct: 551 VLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSG 610
Query: 653 REITVRDTYRFHCFKDGRCSCGDYW 677
R+I VRD RFH F++G CSC DYW
Sbjct: 611 RKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 180/415 (43%), Gaps = 49/415 (11%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ C + GK +H + S YL N + +Y KCG L AA F+ T NV
Sbjct: 64 LRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNV 123
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKD 121
FS+ +++AA+A A L + + P+ +++ L+ A A ALS
Sbjct: 124 FSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVA-------ALSWLDR 176
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
R L +++ C CGF V N L+ Y++ L
Sbjct: 177 GRA----------------------LHRRIAC----CGFLADIFVANCLINMYAKCRSLA 210
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A VF + + ++W ++V AY + +AL++F M + T +++
Sbjct: 211 DACSVFESLTS-RSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVC 269
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ G + H +I + N +G+ LI++Y KC+ + KVF+ + + D++ W
Sbjct: 270 ADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKCASP-DEARKVFDAMQRKDIITW 327
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNR-----VGYHPDDCSFVCVISACSN--LSPSLGKQ 354
N+MI+ Y Q Y QAL +K++ +G DD +F+ V+ ACS+ L K
Sbjct: 328 NSMIAVYGQN-GYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKL 386
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
++ + + L+ + + G L++A + MP H ++ +++ G
Sbjct: 387 YSSMIGDYGFKPTSLQC-GCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLG 440
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 128/253 (50%), Gaps = 14/253 (5%)
Query: 250 GLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYS 309
G + H H++ GF + ++ + L+++Y KC G ++ VF P+ ++ W M++ ++
Sbjct: 76 GKRIHYHIVLCGFKSSRYLCNLLVEMYGKC-GSLQAAKSVFHITPRRNVFSWTIMVAAFA 134
Query: 310 QKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNR 368
Y D AL + ++ G P+ +F+ ++ A + LS G+ +H ++
Sbjct: 135 HNGHYMD-ALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLAD- 192
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE 428
I V N L+ MY+KC +L DA +F+ + + ++ +++A YA +G +AL++F M
Sbjct: 193 IFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTL 252
Query: 429 TNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC----MIDLLGRA 484
+ PT +TFV+V+ CA G++ ++ + E C +I++ G+
Sbjct: 253 DGVEPTEVTFVTVVDVCADIAVFGIGREVHGVI------DARSEANVCVGNALINMYGKC 306
Query: 485 GKLTDAERLIEAM 497
+A ++ +AM
Sbjct: 307 ASPDEARKVFDAM 319
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
H + ANV N L+ Y + AR++FD + + D++++N++I+ Y G
Sbjct: 282 HGVIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGF 341
Query: 114 SALSLFKDMREKRFDT-----DGFTLSGLITASSNNLCLIK---QLHCLAI--YCGFDHY 163
AL ++K M+E R D T G++ A S+ L+K +L+ I Y GF
Sbjct: 342 QALEIYKRMQESRMTILGITHDDITFIGVLFACSHA-GLVKDSCKLYSSMIGDY-GFKPT 399
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
+ L+ R G+LDEA+ M D W ++ A H + A + ++
Sbjct: 400 SLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIM 459
Query: 224 SLQ 226
+L+
Sbjct: 460 ALR 462
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/527 (38%), Positives = 310/527 (58%), Gaps = 37/527 (7%)
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR-EGLEALQLFQEMVSLQL-GLDMYTLA 235
G +D A+++F ++ + + SWNSM+ Q + E + LF++MV + +T+A
Sbjct: 107 GDIDYARKLFSQI-QRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMA 165
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
+L A + + L G Q HA+++KSGF + + + L++ YAKC D+ KVF+EI
Sbjct: 166 FVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCE-DIVLASKVFDEITD 224
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQ 354
+LV W+TMISGY+ + ++ALG F+ + + G PD+ + V VISAC+ + + GK
Sbjct: 225 RNLVAWSTMISGYA-RIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKW 283
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+HA K I ++ + ++ ALV MY+KCG +E A+ +FD MP +T + +SMI G A +G
Sbjct: 284 VHAYINKQLIETD-LELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAING 342
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHY 474
+ +AL F M E + P ++TF+ VLSACAH+G V+EG++Y+S M + FG P E Y
Sbjct: 343 LAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELY 401
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEP 517
CM+DLL RA + DA L+E MP +P + + A L+LEP
Sbjct: 402 GCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEP 461
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
NA Y++L+N+YA+ +WE+++ +R+ M+ G++ PG S IEV +H FV D SHP
Sbjct: 462 HNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHP 521
Query: 578 MIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYG 625
E+ L ++S+++ G+ P +KE L HSE+LA+A+GLL T
Sbjct: 522 EAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTP 581
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCS 672
I ++KNLR+CGDCH K ISA REI VRD RFH F +G CS
Sbjct: 582 MAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCS 628
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 14/282 (4%)
Query: 38 NHFILLYSKCGCLSAAHHAFNQTQHANV---------FSFNVLLAAYARQLRIASARQLF 88
N F + + C + Q HANV F L+ YA+ I A ++F
Sbjct: 160 NTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVF 219
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLC 146
D+I +LV+++T+IS YA G AL LF+DM++ D T+ +I+ A+S L
Sbjct: 220 DEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALD 279
Query: 147 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K +H + ++ +L+ Y++ G ++ AK VF M +KD +W+SM+V
Sbjct: 280 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAM-PVKDTKAWSSMIVGL 338
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 266
+ +AL+ F M ++ + T +L+A + G ++ + +++ G +
Sbjct: 339 AINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSM 398
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
+ ++DL + S + D + E +P P+ V+W T++ G
Sbjct: 399 ELYGCMVDLLCRAS-LVEDACTLVETMPISPNPVIWRTLLVG 439
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 31/144 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C L TGK +HA K L+ LS + +Y+KCGC
Sbjct: 264 TMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGC----------- 312
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A+++FD +P D +++++I A G E AL F
Sbjct: 313 --------------------IERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFF 352
Query: 121 DMREKRFDTDGFTLSGLITASSNN 144
M E + + T G+++A +++
Sbjct: 353 RMEEAKVKPNHVTFIGVLSACAHS 376
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMY---SKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+QIHA + + + IS + + S G+++ AR+LF ++ N S NSMI G
Sbjct: 74 RQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRG 133
Query: 410 YAQ-HGIGMEALRLFEWMLETNIP-PTNITFVSVLSACAHTGKVAEGQK-YFSMMKDMFG 466
+Q E + LF M+ P P T VL AC+ + EGQ+ + +++K FG
Sbjct: 134 CSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFG 193
Query: 467 FEP 469
P
Sbjct: 194 SSP 196
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 342/626 (54%), Gaps = 36/626 (5%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N F + L+ AY+ ++ A +F+ I + D V + ++S Y++ E+A +F MR
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255
Query: 124 EKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ F L+ ++ A+ ++ L K +H AI D V +LL Y++ G +
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 315
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A R+ +EM D + + M+ Y Q + +A +LF ++ + + Y+L+S+L A
Sbjct: 316 DA-RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T++ L G Q H H IK G + +G+ L+D YAKC+ DM +K+F + + V W
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN-DMDSSLKIFSSLRDANEVSW 433
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC-SNLSPSLGKQIHALTI 360
NT++ G+SQ ++AL F ++ ++ V+ AC S S QIH +I
Sbjct: 434 NTIVVGFSQ-SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC-SI 491
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
+ +N + N+L+ Y+KCG + DA ++F + E + +S N++I+GYA HG +AL
Sbjct: 492 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 551
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
LF+ M ++N+ +ITFV++LS C+ TG V G F M+ G +P EHY+C++ L
Sbjct: 552 ELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNAVPY 523
LGRAG+L DA + I +P P ++ +A A L++EP + Y
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTY 671
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L+N+YAA+G ++VA +R+ MR+ GV+K PG SW+E+K ++H F HP ++ I+
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVIN 731
Query: 584 NYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVM 631
LE ++ K + GY+PD K + L HSE+LA+A+GL+ T G PI ++
Sbjct: 732 AMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRIL 791
Query: 632 KNLRICGDCHNAIKFISAIAGREITV 657
KNLR C DCH A IS I REI V
Sbjct: 792 KNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 240/436 (55%), Gaps = 10/436 (2%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++F NVLL Y + +ASAR+LFD++P+ ++VS+ TL+ A+A GD E+A +LF+ +R
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 124 EKRFDTDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + + F L+ + + + + L +H A G DH A V + L+ YS +
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+A+ VF + KD V W +MV Y ++ A ++F +M + + L S+L A
Sbjct: 215 DAEHVFNGIVR-KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAA 273
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L +V G H IK+ H+G L+D+YAKC GD++D FE IP D++L
Sbjct: 274 VCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKC-GDIKDARLAFEMIPYDDVILL 332
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
+ MIS Y+Q + ++QA F +L R P++ S V+ AC+N+ GKQIH I
Sbjct: 333 SFMISRYAQSNQ-NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAI 391
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
KI S+ + V NAL+ Y+KC +++ + ++F + + N VS N+++ G++Q G+G EAL
Sbjct: 392 KIGHESD-LFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAE-GQKYFSMMKDMFGFEPEGEHYSCMID 479
+F M +P T +T+ SVL ACA T + GQ + S+ K F + + +ID
Sbjct: 451 SVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST--FNNDTVIGNSLID 508
Query: 480 LLGRAGKLTDAERLIE 495
+ G + DA ++ +
Sbjct: 509 TYAKCGYIRDALKVFQ 524
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 19/306 (6%)
Query: 209 HREGLEA----LQLFQ-EMVSLQL-----GLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
HR G A LQ + E+ SL + G+D + A L + D GG H H++
Sbjct: 27 HRRGFAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVV 86
Query: 259 KSG--FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
+ G + + L+++Y K G + ++F+ +P+ ++V + T++ ++Q+ ++ +
Sbjct: 87 RRGGVGRLDLFCANVLLNMYGKL-GPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF-E 144
Query: 317 QALGCFKKLNRVGYHPDDCSFVCVIS-ACSNLSPSLGKQIHALTIKIEIRSNRISVNNAL 375
A F++L G+ + ++ A + + L +H+ K+ N V + L
Sbjct: 145 AAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAF-VGSGL 203
Query: 376 VAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
+ YS C + DA +F+ + + V +M++ Y+++ A R+F M + P
Sbjct: 204 IDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNP 263
Query: 436 ITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
SVL A V G+ +K + EP ++D+ + G + DA
Sbjct: 264 FALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVG--GALLDMYAKCGDIKDARLAF 321
Query: 495 EAMPFN 500
E +P++
Sbjct: 322 EMIPYD 327
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL+ C + +H K+ + N I Y+KCG + A F
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL----VSYNTLISAYADCGDTESAL 116
++ S+N +++ YA + A A +LFD++ + ++ +++ L+S + G L
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGL 586
Query: 117 SLFKDMR 123
SLF MR
Sbjct: 587 SLFDSMR 593
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 330/654 (50%), Gaps = 66/654 (10%)
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE-KRFDTDGFTLSGLITASSNNL 145
+F QIP P N L+ + E + L+ ++R F D F+ L+ A S
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 146 CLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
++H LA GF + L+ Y+ + +A+ +F +M D V+WN ++
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCH-PDAVAWNMII 194
Query: 204 VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFH 263
Y Q+ +AL+LF++M S + D L ++L+A +L G H + +G+
Sbjct: 195 DGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254
Query: 264 QNSHIGSGLIDLYAKCS------------------------------GDMRDCMKVFEEI 293
+SH+ + LI++YA C G ++D +F+++
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ DLV W+ MISGY++ ++ +AL F ++ + PD + + VISACS++ +
Sbjct: 315 IERDLVCWSAMISGYAESDQ-PQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA 373
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
IH + +SVNNAL+ MY+KCGNL AR +F+ MP N +S +SMI +A
Sbjct: 374 NWIHTYVDRSGF-GRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 432
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG A++LF M E NI P +TF+ VL AC H G V EG+K FS M + G P E
Sbjct: 433 HGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTRE 492
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQL 515
HY CM+DL RA L A LIE MPF P I AA L+L
Sbjct: 493 HYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLEL 552
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
EP + V+L+NIYA +W +V IR+ M +G+ K+ S IE+ Q+H+F+ D
Sbjct: 553 EPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRY 612
Query: 576 HPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTS 623
H EI+ L+E+ K+K GY P DK++ ++ HSEKLAV +GL+S
Sbjct: 613 HKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRR 672
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I ++KNLRIC DCH+ +K +S + EI VRD RFH G CSC DYW
Sbjct: 673 NESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 230/690 (33%), Positives = 357/690 (51%), Gaps = 87/690 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK+C +DL G+S+H ++ + F Y N + +YSK F
Sbjct: 12 VFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK----------FWSL 61
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ V F ++ IP+P + G ++ L
Sbjct: 62 EEGGVQRF--------------CDSKMLGGIPEP------------REIGKCSNSHDLPC 95
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG-- 178
++ E+ G +G + SN L + + FD + + YS+
Sbjct: 96 ELDER---VAGIDQNGDLNQMSNILYQVNTYKKV-----FDEGKTSD-----VYSKKEKE 142
Query: 179 --FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+L ++VF EM +D VSWN+++ Q+ +AL + +EM + L D +TL+S
Sbjct: 143 SYYLGSLRKVF-EMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSS 201
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L F +L+ G + H + I++G+ + IGS LID+YAKC+ + D +VF +PQ
Sbjct: 202 VLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT-RVDDSCRVFYMLPQH 260
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
D + WN++I+G Q + D+ L F+++ P+ SF ++ AC++L+ LGKQ+
Sbjct: 261 DGISWNSIIAGCVQNGMF-DEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQL 319
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H I+ N + + +ALV MY+KCGN+ AR +FD+M ++ VS +MI GYA HG
Sbjct: 320 HGYIIRSRFDGN-VFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 378
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
+A+ LF+ M + P + F++VL+AC+H G V E KYF+ M + P EHY+
Sbjct: 379 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 438
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHFLQLEPS 518
+ DLLGR G+L +A I M P GS+ A K + ++P
Sbjct: 439 AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ 498
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
N YV+L+NIY+A+G+W++ +R MRD+G++KKP SWIE+K ++H FVA D SHP
Sbjct: 499 NIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPY 558
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD----------KEKR--LVHHSEKLAVAFGLLSTSYGE 626
I+ L+ + +M++ GYV D ++KR L HSE+LA+ FG++ST G
Sbjct: 559 YDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGT 618
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREIT 656
I V KNLR+C DCH A KFIS I GREI
Sbjct: 619 TIRVTKNLRVCVDCHTATKFISKIVGREIV 648
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/606 (33%), Positives = 322/606 (53%), Gaps = 66/606 (10%)
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
S L + N + K+LH I G +H+ +L+ Y + G L +A ++F + + +
Sbjct: 14 SQLFSLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQ-Q 72
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDL--VGGLQ 252
D V+W +++ A +A + ++ L D + +S++ A +L + G Q
Sbjct: 73 DHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQ 132
Query: 253 FHAHLIKSGFHQNSHIGSGLIDLYAKC------------------------------SGD 282
HA + S F ++ + S L+D+YAK SG
Sbjct: 133 LHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGR 192
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH-PDDCSFVCVI 341
+ +++F E P +L W +ISG Q +D AL F ++ R G D V+
Sbjct: 193 KLEALELFRESPFKNLYAWTALISGLVQSGNAND-ALYLFVEMRREGVSIADPLVLSSVV 251
Query: 342 SACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
AC+N + LGKQ+H + I + S + ++NALV MY+KC ++ A+ +F M +
Sbjct: 252 GACANSAVRELGKQVHCVVITLGYESC-LFISNALVDMYAKCSDVVAAKYIFCEMRRKDV 310
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
VS S+I G AQHG+ EAL L++ M+ + P +TFV ++ AC+H G V++G+ F
Sbjct: 311 VSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKS 370
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------S 503
M + FG P +HY+C++DL R+G L +AE LI MP P
Sbjct: 371 MVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTK 430
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVK 563
+A++ A+H L L+P + Y++L+NIYA +G WE V+ +R+LM + V+K PG+S +++
Sbjct: 431 MAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLG 490
Query: 564 KQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSE 611
++ VF A + S PM EI + ++ +M++ GYVPD KE++L HSE
Sbjct: 491 REFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSE 550
Query: 612 KLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRC 671
+LA+A+GLL G I ++KNLR+CGDCH +K ISAI REI VRD R+H FKDG+C
Sbjct: 551 RLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKC 610
Query: 672 SCGDYW 677
SC D+W
Sbjct: 611 SCNDFW 616
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 13/316 (4%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPF--SAYLSNHFILLYSKCGCLSAAHHA 56
F ++K C +G + GK LHA +L L PF + + + +Y+K
Sbjct: 111 VFSSLIKACANLGSVHVKLGKQLHARFL--LSPFFEDDVVKSSLVDMYAKFELPDYGRAV 168
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F+ + S+ +++ YAR R A +LF + P +L ++ LIS G+ AL
Sbjct: 169 FDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDAL 228
Query: 117 SLFKDMREKRFD-TDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTC 173
LF +MR + D LS ++ A +N+ L KQ+HC+ I G++ ++N+L+
Sbjct: 229 YLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDM 288
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y++ + AK +F EM KD VSW S++V QH EAL L+ +MV + + T
Sbjct: 289 YAKCSDVVAAKYIFCEMRR-KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVT 347
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
++ A + + + G +++ G + + L+DL+++ SG + + +
Sbjct: 348 FVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSR-SGHLDEAENLIRT 406
Query: 293 IP-QPDLVLWNTMISG 307
+P +PD W ++S
Sbjct: 407 MPVKPDEPTWAALLSA 422
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+F N L+ YA+ + +A+ +F ++ + D+VS+ ++I A G E AL+L+ DM
Sbjct: 279 LFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVL 338
Query: 125 KRFDTDGFTLSGLITASSN------NLCLIKQL-HCLAIYCGFDHYASVNNSLLTCYSRN 177
+ T GLI A S+ L K + I HY LL +SR+
Sbjct: 339 AGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHY----TCLLDLFSRS 394
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
G LDEA+ + M DE +W +++ A H A+++ ++ L+
Sbjct: 395 GHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLK 443
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 318/563 (56%), Gaps = 37/563 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNS--LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+KQ+H +I G N + S + + A ++F ++ + + +WN+M+
Sbjct: 51 LKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQI-QAPNIFTWNTMIRG 109
Query: 206 YGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+ + A++LF +M + + D +T + A L D+ G H+ ++++GF
Sbjct: 110 FAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS 169
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ + L+ +Y+ G + +VFE + D V WN++I+G++ ++AL +++
Sbjct: 170 LRFVQNSLVHMYS-VLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNG-MPNEALTLYRE 227
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G PD + V ++SAC L +LG+++H +K+ + N+ +NAL+ +YSKCG
Sbjct: 228 MGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQ-HASNALLDLYSKCG 286
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
N DA+++FD M E + VS S+I G A +G+G EAL+LF + + P+ ITFV VL
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
AC+H G + EG YF MK+ +G P EH+ CM+DLL RAGK+ DA I MP P +
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNA 406
Query: 504 IALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+ + A +LE ++ +V+L+N+YA+ +W +V +R++M
Sbjct: 407 VIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIM 466
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------ 600
+GV+K PG+S +E+K +++ F+ D SHP +E + L ++++ +K GYVP
Sbjct: 467 LMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVL 526
Query: 601 ------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
+KE L HH+EK+A+AF L++T G PI +MKNLR+C DCH AIK IS + RE
Sbjct: 527 ADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFERE 586
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD RFH FKDG CSC DYW
Sbjct: 587 IIVRDRSRFHHFKDGSCSCKDYW 609
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 37/309 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + K D+ G+ +H++ ++N ++ N + +YS G L +A+
Sbjct: 138 TFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAY------ 191
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q+F+ + D V++N++I+ +A G AL+L++
Sbjct: 192 -------------------------QVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + + DGFT+ L++A L L +++H + G +N+LL YS+ G
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A++VF EM E + VSW S++V + G EAL+LF E+ L T +L
Sbjct: 287 NFRDAQKVFDEMEE-RSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVL 345
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + L G + + + G ++DL + +G + D +P P
Sbjct: 346 YACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCR-AGKVGDAYDYIRNMPVPP 404
Query: 297 DLVLWNTMI 305
+ V+W T++
Sbjct: 405 NAVIWRTLL 413
>gi|302770356|ref|XP_002968597.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
gi|300164241|gb|EFJ30851.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
Length = 631
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 313/563 (55%), Gaps = 38/563 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+++H + G + N L+ Y + G +++A+ VF ++ VSW +M+ +
Sbjct: 73 RRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEDARAVFEKIESPNSVVSWTAMISGFAL 132
Query: 209 H-REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS- 266
H RE L AL F++MV+ + + T SIL A + D+ G H + S F ++
Sbjct: 133 HGREDL-ALDFFRKMVAEGVRPNEVTFVSILGACAAARDVKHGTAIHELVESSEFGRSYL 191
Query: 267 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+G+ LID+Y KC G +VFE++ + DLV+WN MI+ SQ + +QAL F+ ++
Sbjct: 192 SVGTALIDMYGKC-GRPELASRVFEKMERRDLVVWNAMITVCSQ-QGLDEQALRLFRVMD 249
Query: 327 RVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSN-RISVNNALVAMYSKCGN 384
G+ PD+ + V + ACSNL S + GK++H L + + S+ ++ + ALV MY + G
Sbjct: 250 LEGHTPDEVTLVAALEACSNLNSLAAGKKLHELILDAGLDSSIKMVLATALVNMYGRYGQ 309
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
LEDA R+F++M N V+ ++IA +AQHG + A+ L M + +I F+SVL A
Sbjct: 310 LEDALRVFEKMNHWNLVAWTALIAAFAQHG-DVHAIDLSWRMHLEGVQADDIVFLSVLHA 368
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
C+H G + G F M FG HYSCM+DLL R G++ +AE L+ +MPF P +
Sbjct: 369 CSHAGVLEAGLSCFQGMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHM 428
Query: 505 ALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
+K A L P +A PYV++++ YAA+ KW+EVA +R M
Sbjct: 429 EMKTLLAACRVSGDTPRGARVARLASGLIPLDAAPYVLMSHAYAAAEKWDEVAEVRERMA 488
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGS-HPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
GV+K G+S +EVK ++H F A + S H EI L + +K+AGYVPD
Sbjct: 489 KLGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEAGYVPDTGQIG 548
Query: 602 -------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
KE L HSE++A+AFGLL G PI V+KNLR+C DCH K IS GR
Sbjct: 549 HCVQEDDKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRR 608
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD YRFH F++G CSCGDYW
Sbjct: 609 IVVRDAYRFHRFENGTCSCGDYW 631
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 141/269 (52%), Gaps = 7/269 (2%)
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
AS+L L G + HA ++ +G ++ +G+ LI +Y KC G M D VFE+
Sbjct: 55 AFASLLQQCGRSRSLPDGRRIHAEIVDTGLGKDLFLGNHLIQMYGKC-GAMEDARAVFEK 113
Query: 293 IPQPD-LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-S 350
I P+ +V W MISG++ D AL F+K+ G P++ +FV ++ AC+
Sbjct: 114 IESPNSVVSWTAMISGFALHGR-EDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDVK 172
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G IH L E + +SV AL+ MY KCG E A R+F++M + V N+MI
Sbjct: 173 HGTAIHELVESSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMERRDLVVWNAMITVC 232
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
+Q G+ +ALRLF M P +T V+ L AC++ +A G+K ++ D G +
Sbjct: 233 SQQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNSLAAGKKLHELILDA-GLDSS 291
Query: 471 GEHY--SCMIDLLGRAGKLTDAERLIEAM 497
+ + ++++ GR G+L DA R+ E M
Sbjct: 292 IKMVLATALVNMYGRYGQLEDALRVFEKM 320
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 42/301 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLS--NHFILLYSKCGCLSAAHHAFN 58
TF +L C RD+ G ++H L + S YLS I +Y KCG
Sbjct: 157 TFVSILGACAAARDVKHGTAIHELVESSEFGRS-YLSVGTALIDMYGKCG---------- 205
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
R A ++F+++ + DLV +N +I+ + G E AL L
Sbjct: 206 ---------------------RPELASRVFEKMERRDLVVWNAMITVCSQQGLDEQALRL 244
Query: 119 FKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYAS--VNNSLLTCY 174
F+ M + D TL + A S N+L K+LH L + G D + +L+ Y
Sbjct: 245 FRVMDLEGHTPDEVTLVAALEACSNLNSLAAGKKLHELILDAGLDSSIKMVLATALVNMY 304
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
R G L++A RVF +M + V+W +++ A+ QH + + A+ L M + D
Sbjct: 305 GRYGQLEDALRVFEKMNHW-NLVAWTALIAAFAQHGD-VHAIDLSWRMHLEGVQADDIVF 362
Query: 235 ASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A + L GL F + G + S ++DL A+C G + + ++ +
Sbjct: 363 LSVLHACSHAGVLEAGLSCFQGMVADFGVRGGAAHYSCMVDLLARC-GRVAEAEELLHSM 421
Query: 294 P 294
P
Sbjct: 422 P 422
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 340/624 (54%), Gaps = 77/624 (12%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIP-QPDLVSYNTLISAYADCGDTESALSLFKDM 122
+V N LLA YA+ RI+ A LF+ + + + V++ ++++ Y+ G A+ F+D+
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL 218
Query: 123 REKRFDTDGFTLSGLITA-SSNNLCLIK-QLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R + ++ +T ++TA +S + C + Q+HC + GF V ++L+ Y++ +
Sbjct: 219 RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREM 278
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASIL 238
+ A R E E+ D VSWNSM+V G R+GL EAL +F M + +D +T+ SIL
Sbjct: 279 ESA-RALLEGMEVDDVVSWNSMIV--GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Query: 239 TAFT-SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
F S ++ H ++K+G+ + + L+D+YAK G M +KVFE + + D
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAK-RGIMDSALKVFEGMIEKD 394
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
++ W +++G + Y D+AL F + G PD V+SA + L+ G+Q+H
Sbjct: 395 VISWTALVTGNTHNGSY-DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVH 453
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
IK S+ +SVNN+LV MY+KCG+LEDA +F+ M + ++ +I GYA++G+
Sbjct: 454 GNYIKSGFPSS-LSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGL- 511
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
+ + Q+YF M+ ++G P EHY+C
Sbjct: 512 ----------------------------------LEDAQRYFDSMRTVYGITPGPEHYAC 537
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSN 519
MIDL GR+G E+L+ M P + K AA ++LEP+N
Sbjct: 538 MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNN 597
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
AVPYV L+N+Y+A+G+ +E A +RRLM+ R + K+PG SW+E K ++H F++ED HP +
Sbjct: 598 AVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRM 657
Query: 580 KEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEP 627
EI++ ++EM +K+AGY D KE L +HSEKLAVAFGLL G P
Sbjct: 658 VEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAP 717
Query: 628 ILVMKNLRICGDCHNAIKFISAIA 651
I ++KNLR+CGDCH+A+K + A
Sbjct: 718 IRIIKNLRVCGDCHSAMKLLVTFA 741
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 185/334 (55%), Gaps = 10/334 (2%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+++ YS + L +A+++F +K+ +SWN+++ Y + +EA LF EM S +
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRS-NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGI 121
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ YTL S+L TSL L+ G Q H H IK+GF + ++ +GL+ +YA+C + +
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK-RISEAE 180
Query: 288 KVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
+FE + + + V W +M++GYSQ ++ +A+ CF+ L R G + +F V++AC++
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQN-GFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 347 LSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNS 405
+S +G Q+H +K ++N I V +AL+ MY+KC +E AR L + M + VS NS
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTN-IYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNS 298
Query: 406 MIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS--ACAHTGKVAEGQKYFSMMKD 463
MI G + G+ EAL +F M E ++ + T S+L+ A + T + ++K
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT 358
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G+ + ++D+ + G + A ++ E M
Sbjct: 359 --GYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 190/438 (43%), Gaps = 44/438 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C G +H +K+ + Y+ + I +Y+KC
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC------------- 275
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R++ SAR L + + D+VS+N++I G ALS+F
Sbjct: 276 ----------------REME--SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 121 DMREKRFDTDGFTLSGLITA---SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E+ D FT+ ++ S + + HCL + G+ Y VNN+L+ Y++
Sbjct: 318 RMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKR 377
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +D A +VF M E KD +SW ++V + EAL+LF M + D AS+
Sbjct: 378 GIMDSALKVFEGMIE-KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASV 436
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L+A L L G Q H + IKSGF + + + L+ +Y KC G + D +F + D
Sbjct: 437 LSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKC-GSLEDANVIFNSMEIRD 495
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSLGKQIH 356
L+ W +I GY++ D A F + V G P + C+I + ++
Sbjct: 496 LITWTCLIVGYAKNGLLED-AQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFV--KVE 552
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE---HNTVSLNSMIAGYAQH 413
L ++E+ + +V A++A K GN+E+ R + E +N V + Y+
Sbjct: 553 QLLHQMEVEPD-ATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAA 611
Query: 414 GIGMEALRLFEWMLETNI 431
G EA + M NI
Sbjct: 612 GRQDEAANVRRLMKSRNI 629
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 39/182 (21%)
Query: 347 LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH-------- 398
L P G IH+ + ++ SN L+ SK G +++AR++FD+MPE
Sbjct: 13 LKP-FGSCIHSYADRTKLHSN------LLLGDLSKSGRVDEARQMFDKMPERDEFTWNTM 65
Query: 399 -----------------------NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTN 435
NT+S N++I+GY + G +EA LF M I P
Sbjct: 66 IVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNE 125
Query: 436 ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
T SVL C + G++ GF+ + + ++ + + ++++AE L E
Sbjct: 126 YTLGSVLRMCTSLVLLLRGEQIHGHTIKT-GFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 496 AM 497
M
Sbjct: 185 TM 186
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 215/576 (37%), Positives = 317/576 (55%), Gaps = 36/576 (6%)
Query: 134 LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
LS L+ ASS+ +K++H + + GF S+ LL G + A++VF EM +
Sbjct: 13 LSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP 72
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+ + WN++ Y +++ E+L L+++M L + D +T ++ A + L D G
Sbjct: 73 RIFL-WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL 131
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
HAH++K GF + + L+ +Y K G++ +FE + DLV WN ++ Q
Sbjct: 132 HAHVVKYGFGCLGIVATELVMMYMK-FGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGN 190
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVN 372
S AL F K+ D + V ++SAC L S +G++I+ K EI N I V
Sbjct: 191 -SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCN-IIVE 248
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
NA + M+ KCGN E AR LF+ M + N VS ++MI GYA +G EAL LF M +
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMM--KDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
P +TF+ VLSAC+H G V EG++YFS+M + EP EHY+CM+DLLGR+G L +A
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Query: 491 ERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAAS 533
I+ MP P + + K A+ ++ P +V+L+NIYAA+
Sbjct: 369 YEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
GKW+ V +R MR G +K +S +E + ++H F D SHP K I+ L+E+ +K+
Sbjct: 429 GKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKI 488
Query: 594 KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
++ GYVPD KE L HHSEKLA+AFGL+ G PI VMKNLR C DCH
Sbjct: 489 RKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCH 548
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KF+S++ EI +RD RFH F++G CSC ++W
Sbjct: 549 AFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 171/355 (48%), Gaps = 15/355 (4%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN 143
ARQ+FD++ +P + +NTL Y +L L+K MR+ D FT ++ A S
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 144 --NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
+ LH + GF V L+ Y + G L A+ +F M ++KD V+WN+
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM-QVKDLVAWNA 180
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
+ Q AL+ F +M + + D +T+ S+L+A L L G + + K
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE 240
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
N + + +D++ KC G+ +FEE+ Q ++V W+TMI GY+ + S +AL
Sbjct: 241 IDCNIIVENARLDMHLKC-GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD-SREALTL 298
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIK-----IEIRSNRISVNNAL 375
F + G P+ +F+ V+SACS+ + GK+ +L ++ +E R + +
Sbjct: 299 FTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA---CM 355
Query: 376 VAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V + + G LE+A +MP E +T +++ A H + ++ + ++ET
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVET 410
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 118/243 (48%), Gaps = 8/243 (3%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + ++SA LF+ + DLV++N ++ G++ AL F M D
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 131 GFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT+ +++A +L + ++++ A D V N+ L + + G + A+ +F
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
EM + ++ VSW++M+V Y + + EAL LF M + L + T +L+A + +
Sbjct: 270 EMKQ-RNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 249 GGLQFHAHLIKS---GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTM 304
G ++ + +++S + ++DL + SG + + + +++P +PD +W +
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR-SGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 305 ISG 307
+
Sbjct: 388 LGA 390
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 54/343 (15%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFIL--LYSKCGCLSAAH-------HAFNQTQHANVFS 67
TG S AL N + A + F + + S CG L + A + N+
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247
Query: 68 FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRF 127
N L + + +AR LF+++ Q ++VS++T+I YA GD+ AL+LF M+ +
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL 307
Query: 128 DTDGFTLSGLITASSNN---------LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ T G+++A S+ L+ Q + + +HYA + + L R+G
Sbjct: 308 RPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL----GRSG 363
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+EA +M D W +++ A HR+ + ++ +V + Y
Sbjct: 364 LLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY------ 417
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC----MKVFEEIP 294
H++ S N + +G D K MR + + +
Sbjct: 418 -----------------HVLLS----NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVE 456
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCS 336
+ + +N + Q + ++ KK+ ++GY PD CS
Sbjct: 457 FEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCS 499
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 299/559 (53%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+QLH ++ V SLL+ Y++ G L A+RVF EM V W +++ AY
Sbjct: 91 EQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALITAYMD 149
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ + + + + D +T +LTA + DL G + G Q+ +
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 209
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ +DLY KC G+M +VF+++ D V W M+ GY+ + +AL F +
Sbjct: 210 ATAAVDLYVKC-GEMAKAREVFDKMRHKDAVAWGAMVGGYASNG-HPREALDLFLAMQAE 267
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD + +SAC+ L LG+Q + E N + + AL+ MY+KCG+ +
Sbjct: 268 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVE 326
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F +M + + + N+MI G G A L M ++ + + TF+ +L +C H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 386
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
TG + +G++YF M ++ P EHY CM+DLL RAG L +A +L++ MP ++ L
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 446
Query: 508 A-------------ANHFLQ----LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
A A H L+ LEP N+ YVML+NIY+ G+WE+ A +R M+ +G
Sbjct: 447 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 506
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------- 600
V+K P SW+E + ++H F D SHP+ +I+ L+E+ +MK GY P
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566
Query: 601 --DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
+KE LVHHSEKLA+AF LL T GE I V KNLR+C DCH AIK +S I REI VR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 626
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFHCF+DG CSC DYW
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 173/357 (48%), Gaps = 9/357 (2%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H N LL+ YA+ + A+++FD++P P V + LI+AY D GD A+ + ++
Sbjct: 103 HTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARN 162
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D FT ++TA + +L + + A G V + + Y + G
Sbjct: 163 AFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGE 222
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A+ VF +M KD V+W +MV Y + EAL LF M + + D Y +A L+
Sbjct: 223 MAKAREVFDKMRH-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALS 281
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A T L L G Q + F N +G+ LID+YAKC G + VF+++ + D++
Sbjct: 282 ACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC-GSTVEAWVVFQQMRKKDII 340
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHA 357
+WN MI G + A ++ + G +D +F+ ++ +C++ L + H
Sbjct: 341 VWNAMILGLGMT-GHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 399
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+T K+ S RI +V + S+ G L++A +L D MP N V L +++ G H
Sbjct: 400 MT-KLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 455
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA +K H N H+ + L+ LYAKC G + +VF+E+P P V W +I+
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC-GLLHRAQRVFDEMPHPSTVPWTALIT 145
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS 366
Y + +A+ + G PD + V V++AC+ ++ + + E +
Sbjct: 146 AYMDAGDLR-EAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 204
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ V A V +Y KCG + AR +FD+M + V+ +M+ GYA +G EAL LF M
Sbjct: 205 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 264
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P LSAC G + G++ M+ D F + +ID+ + G
Sbjct: 265 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV-DWDEFLDNPVLGTALIDMYAKCGS 323
Query: 487 LTDAERLIEAM 497
+A + + M
Sbjct: 324 TVEAWVVFQQM 334
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +VL C DL TG+++ + V S +++ + LY KCG ++ A F++
Sbjct: 174 TAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+H D V++ ++ YA G AL LF
Sbjct: 234 RHK-------------------------------DAVAWGAMVGGYASNGHPREALDLFL 262
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D + ++G ++A + L L +Q + + F + +L+ Y++ G
Sbjct: 263 AMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 322
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA VF +M + KD + WN+M++ G A L +M + L+ T +L
Sbjct: 323 STVEAWVVFQQMRK-KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL 381
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ T + G ++ ++ K +H + I ++DL ++ +G +++ ++ +++P P
Sbjct: 382 CSCTHTGLIQDGRRYFHNMTKL-YHISPRIEHYGCMVDLLSR-AGLLQEAHQLVDDMPMP 439
Query: 297 -DLVLWNTMISG 307
+ V+ ++ G
Sbjct: 440 ANAVILGALLGG 451
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 232/706 (32%), Positives = 359/706 (50%), Gaps = 78/706 (11%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G LHA +K L+N+ I +Y+KCG
Sbjct: 20 LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCG-------------------------- 53
Query: 75 YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
++ A ++FD +P+ ++VS+ L+ + G+ L LF +MR + FTL
Sbjct: 54 -----KLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTL 108
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
S + A Q+H + + GF+ + V NSL+ YS+ + +A+RVF ++ +
Sbjct: 109 SATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVF-DVIPSR 167
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQF 253
+ +WNSM+ Y +G ++L +F+EM D +T AS+L A + L G Q
Sbjct: 168 NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQV 227
Query: 254 HAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
HA + G N+ + L+D+Y KC + M+VF+ + + + + W T+I G++Q+
Sbjct: 228 HAAMAVRGVSPASNAILAGALLDVYVKCH-RLPVAMQVFDGLERRNAIQWTTVIVGHAQE 286
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRIS 370
+ +A+ F++ G D V++ ++ + GKQ+H T K + +S
Sbjct: 287 GQVK-EAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLD-VS 344
Query: 371 VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
V N+LV MY KCG +A R F MP N VS +MI G +HG G EA+ LFE M E
Sbjct: 345 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEG 404
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDA 490
+ + ++++LSAC+H+G V E ++YFS + P+ EHY+CM+DLLGRAG+L +A
Sbjct: 405 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 464
Query: 491 ERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAAS 533
+ LI +MP P ++ + + L ++ N V YVML+NI A +
Sbjct: 465 KELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEA 524
Query: 534 GKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV-AEDGSHPMIKEIHNYLEEMSRK 592
G+W E IR MR +G++K+ G SW EV K++H F D +HP +I L E+ +
Sbjct: 525 GEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEAR 584
Query: 593 MKQA-GYVP---------DKEKR---LVHHSEKLAVAFGLL--------STSYGEPILVM 631
M++ GY D+E R L HSE+LAV LL GE + V
Sbjct: 585 MRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVY 644
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLR+CGDCH +K +SA+ R + VRD RFH F++G CSC DYW
Sbjct: 645 KNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+A +L A L GG+Q HA L+K GF ++ + + LID+YAKC G + +VF+ +
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKC-GKLHMAGEVFDGM 65
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
P+ ++V W ++ G+ E + + L F ++ G P++ + + AC + + G
Sbjct: 66 PERNVVSWTALMVGFLHHGE-ARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA-GV 123
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIH + ++ + + V N+LV MYSK DARR+FD +P N + NSMI+GYA
Sbjct: 124 QIHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHA 182
Query: 414 GIGMEALRLFEWMLET-NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G G ++L +F M + P TF S+L AC+ G EG + + M + G P
Sbjct: 183 GQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA-VRGVSPASN 241
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAA 532
AG L D +P +A++ F LE NA+ + + +A
Sbjct: 242 AIL--------AGALLDVYVKCHRLP-----VAMQV---FDGLERRNAIQWTTVIVGHAQ 285
Query: 533 SGKWEEVATIRRLMRDRGVQKK-----------PGFSWIEVKKQMHVFVAE 572
G+ +E + R GV+ F+ +E KQ+H + A+
Sbjct: 286 EGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAK 336
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 318/554 (57%), Gaps = 26/554 (4%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
L+ +Y + I AR LFD++P+ D+V++ +I+ Y C + A +F +M + D
Sbjct: 47 TTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELD 106
Query: 129 TDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF-LDEAKR 185
+ FT+S ++ A CL + +H LAI G D + V+N+L+ Y+ +D+A
Sbjct: 107 PNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACM 166
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
VF + +K+EVSW +++ Y +G L++F++M+ ++ L+ ++ + + A TS+
Sbjct: 167 VFRGI-HLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIG 225
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
G Q HA + K GF N + + ++D+Y +CS + + F E+ Q DL+ WNT+I
Sbjct: 226 SHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSC-FSEANRYFYEMNQRDLITWNTLI 284
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEI 364
+GY + ++L F + G+ P+ +F +++AC+ L+ + G+QIH I+ +
Sbjct: 285 AGYERSN--PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGL 342
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
N ++++NAL+ MYSKCGN+ D+ ++F M + VS +M+ GY HG G EA+ LF+
Sbjct: 343 DGN-LALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M+ + I P + F+++LSAC+H G V EG +YF +M + P+ E Y C++DLLGRA
Sbjct: 402 KMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRA 461
Query: 485 GKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLA 527
GK+ +A LIE+MPF P ++ AA+ L L P A YVML+
Sbjct: 462 GKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLS 521
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA GKW E A +R+LM+ G +K+ G SW+EV ++ FV D I+ I+ LE
Sbjct: 522 NIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLE 581
Query: 588 EMSRKMKQAGYVPD 601
+ MK++GYVPD
Sbjct: 582 NLIGHMKESGYVPD 595
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 183/399 (45%), Gaps = 37/399 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C G + L G+ +H L +K+ + Y+ N + +Y+ C C+S
Sbjct: 111 TISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATC-CVS--------- 160
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ A +F I + VS+ TLI+ Y D L +F+
Sbjct: 161 --------------------MDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFR 200
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + + + F+ S + A S + +QLH GF+ V NS+L Y R
Sbjct: 201 QMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCS 260
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA R FYEM + +D ++WN+++ Y + E+L +F M S + +T SI+
Sbjct: 261 CFSEANRYFYEMNQ-RDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIM 318
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A +L L G Q H +I+ G N + + LID+Y+KC G++ D +VF + + DL
Sbjct: 319 AACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKC-GNIADSHQVFGGMSRRDL 377
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V W M+ GY Y ++A+ F K+ R G PD F+ ++SACS+ G +
Sbjct: 378 VSWTAMMIGYGT-HGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFK 436
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
L + S + +V + + G +E+A L + MP
Sbjct: 437 LMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMP 475
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 16/270 (5%)
Query: 49 CLSAAHHAFNQTQHA---------NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSY 99
C S H F + HA N+ N +L Y R + A + F ++ Q DL+++
Sbjct: 221 CTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITW 280
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIY 157
NTLI+ Y TES L +F M + F + FT + ++ A + L +Q+H I
Sbjct: 281 NTLIAGYERSNPTES-LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIR 339
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
G D +++N+L+ YS+ G + ++ +VF M +D VSW +M++ YG H G EA++
Sbjct: 340 RGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSR-RDLVSWTAMMIGYGTHGYGEEAVE 398
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLY 276
LF +MV + D +IL+A + + GL++ ++ + I ++DL
Sbjct: 399 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLL 458
Query: 277 AKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ +G + + ++ E +P +PD +W +
Sbjct: 459 GR-AGKVEEAYELIESMPFKPDECVWGPFL 487
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 36/213 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++ C L G+ +H ++ + + LSN I +YSKCG
Sbjct: 313 TFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCG------------ 360
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
IA + Q+F + + DLVS+ ++ Y G E A+ LF
Sbjct: 361 -------------------NIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY----SR 176
M D +++A S+ + + L + G D+ S + + C R
Sbjct: 402 KMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVG-DYNISPDQEIYGCVVDLLGR 460
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
G ++EA + M DE W + A H
Sbjct: 461 AGKVEEAYELIESMPFKPDECVWGPFLGACKAH 493
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 333/624 (53%), Gaps = 89/624 (14%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-TDGFTLSGLITASS 142
A+Q+FDQIP P+L ++NTLI AYA + +L +F M + D D FT LI A+S
Sbjct: 88 AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147
Query: 143 --NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
L K H + I + NSL+ Y++ G L RVF + +D VSWN
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPR-RDVVSWN 206
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
SM+ A+ Q EAL+LFQEM +
Sbjct: 207 SMITAFVQGGCPEEALELFQEMET------------------------------------ 230
Query: 261 GFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
QNS + + ++D+Y KC G + D ++F+++P+ D+V W TM+ GY++ EY D A
Sbjct: 231 ---QNSLTLSNAMLDMYTKC-GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEY-DAAQ 285
Query: 320 GCFKKLNRVGYHPDDCSFVCVISA---CSNLSPSLGKQIHALTIKIEIRSNRIS------ 370
G F + + D ++ +ISA C +L + H L + + + ++
Sbjct: 286 GIFDAMP----NQDIAAWNALISAYEQCGKPKEAL-ELFHELQLSKTAKPDEVTLKQGMK 340
Query: 371 ----VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ +L+ MY KCG+L+ A +F + + ++MIAG A HG G +A+ LF M
Sbjct: 341 LNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKM 400
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
E + P +TF ++L AC+H G V EG+ +F+ M+ ++G P S LLG
Sbjct: 401 QEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGKMPMAPAASVWGALLGAC-- 458
Query: 487 LTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
T E ++ +A +A + ++LEP N YV+L+NIYA +GKW+ V+ +R+LM
Sbjct: 459 -TIHENVV---------LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLM 508
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----- 601
RD G++K+PG S IEV +H F+ D SHP K+I+ L+E+ +++ GYVP+
Sbjct: 509 RDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLL 568
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
KE+ L HSEKLA+AFGL+ST +PI ++KNLR+CGDCH+ K +S + R
Sbjct: 569 QLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDR 628
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
EI +RD YRFH F++G CSC DYW
Sbjct: 629 EILLRDRYRFHHFREGHCSCMDYW 652
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 153/348 (43%), Gaps = 64/348 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K +L TGK+ H + +K L+ ++ N I Y+KCG L + F
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-PQPDLVSYNTLISAYADCGDTESALSLF 119
+V S+N ++ A+ + A +LF ++ Q L N ++ Y CG E A LF
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNSLTLSNAMLDMYTKCGSVEDAKRLF 257
Query: 120 KDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M EK D +T ++L Y++ G
Sbjct: 258 DKMPEK--DIVSWT-----------------------------------TMLVGYAKIGE 280
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
D A+ +F M +D +WN+++ AY Q + EAL+LF E LQL
Sbjct: 281 YDAAQGIFDAMPN-QDIAAWNALISAYEQCGKPKEALELFHE---LQL------------ 324
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ T+ D V +K G N H+ + LID+Y KC GD++ + VF + + D+
Sbjct: 325 SKTAKPDEVT--------LKQGMKLNCHLTTSLIDMYCKC-GDLQKALMVFHSVERKDVF 375
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+W+ MI+G + D A+ F K+ P+ +F ++ ACS++
Sbjct: 376 VWSAMIAGLAMHGHGKD-AIALFSKMQEDKVKPNAVTFTNILCACSHV 422
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD-CMKVFEEIPQPDLVLWNTMISGYSQ 310
Q HA ++++G + S LI A D +VF++IP P+L WNT+I Y+
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRSNRI 369
L + L++ PD +F +I A S L GK H + IK+ + S+ +
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSD-V 171
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
+ N+L+ Y+KCG L R+F +P + VS NSMI + Q G EAL LF+ M
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA--GKL 487
N + + + + C G V + ++ F M PE + S L+G A G+
Sbjct: 232 NSLTLSNAMLDMYTKC---GSVEDAKRLFDKM-------PEKDIVSWTTMLVGYAKIGEY 281
Query: 488 TDAERLIEAMP 498
A+ + +AMP
Sbjct: 282 DAAQGIFDAMP 292
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 299/559 (53%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+QLH ++ V SLL+ Y++ G L A+RVF EM V W +++ AY
Sbjct: 546 EQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALITAYMD 604
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ + + + + D +T +LTA + DL G + G Q+ +
Sbjct: 605 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ +DLY KC G+M +VF+++ D V W M+ GY+ + +AL F +
Sbjct: 665 ATAAVDLYVKC-GEMAKAREVFDKMRHKDAVAWGAMVGGYASNG-HPREALDLFLAMQAE 722
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD + +SAC+ L LG+Q + E N + + AL+ MY+KCG+ +
Sbjct: 723 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVE 781
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F +M + + + N+MI G G A L M ++ + + TF+ +L +C H
Sbjct: 782 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 841
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
TG + +G++YF M ++ P EHY CM+DLL RAG L +A +L++ MP ++ L
Sbjct: 842 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 901
Query: 508 A-------------ANHFLQ----LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
A A H L+ LEP N+ YVML+NIY+ G+WE+ A +R M+ +G
Sbjct: 902 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 961
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------- 600
V+K P SW+E + ++H F D SHP+ +I+ L+E+ +MK GY P
Sbjct: 962 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1021
Query: 601 --DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
+KE LVHHSEKLA+AF LL T GE I V KNLR+C DCH AIK +S I REI VR
Sbjct: 1022 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1081
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFHCF+DG CSC DYW
Sbjct: 1082 DNNRFHCFRDGSCSCNDYW 1100
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 172/357 (48%), Gaps = 9/357 (2%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H N LL+ YA+ + A+++FD++P P V + LI+AY D GD A+ + ++
Sbjct: 558 HTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARN 617
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D FT ++TA + +L + + A G V + + Y + G
Sbjct: 618 AFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGE 677
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A+ VF +M KD V+W +MV Y + EAL LF M + + D Y +A L+
Sbjct: 678 MAKAREVFDKMRH-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALS 736
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A T L L G Q + F N +G+ LID+YAKC G + VF+++ + D++
Sbjct: 737 ACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC-GSTVEAWVVFQQMRKKDII 795
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHA 357
+WN MI G + A ++ + G +D +F+ ++ +C++ L + H
Sbjct: 796 VWNAMILGLGMT-GHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 854
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+T I S RI +V + S+ G L++A +L D MP N V L +++ G H
Sbjct: 855 MTKLYHI-SPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 910
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA +K H N H+ + L+ LYAKC G + +VF+E+P P V W +I+
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC-GLLHRAQRVFDEMPHPSTVPWTALIT 600
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS 366
Y + +A+ + G PD + V V++AC+ ++ + + E +
Sbjct: 601 AYMDAGDLR-EAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ V A V +Y KCG + AR +FD+M + V+ +M+ GYA +G EAL LF M
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P LSAC G + G++ M+ D F + +ID+ + G
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV-DWDEFLDNPVLGTALIDMYAKCGS 778
Query: 487 LTDAERLIEAM 497
+A + + M
Sbjct: 779 TVEAWVVFQQM 789
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +VL C DL TG+++ + V S +++ + LY KCG ++ A F++
Sbjct: 629 TAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 688
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+H D V++ ++ YA G AL LF
Sbjct: 689 RHK-------------------------------DAVAWGAMVGGYASNGHPREALDLFL 717
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D + ++G ++A + L L +Q + + F + +L+ Y++ G
Sbjct: 718 AMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 777
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA VF +M + KD + WN+M++ G A L +M + L+ T +L
Sbjct: 778 STVEAWVVFQQMRK-KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL 836
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ T + G ++ ++ K +H + I ++DL ++ +G +++ ++ +++P P
Sbjct: 837 CSCTHTGLIQDGRRYFHNMTKL-YHISPRIEHYGCMVDLLSR-AGLLQEAHQLVDDMPMP 894
Query: 297 -DLVLWNTMISG 307
+ V+ ++ G
Sbjct: 895 ANAVILGALLGG 906
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 299/559 (53%), Gaps = 34/559 (6%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
+QLH ++ V SLL+ Y++ G L A+RVF EM V W +++ AY
Sbjct: 570 EQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALITAYMD 628
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
+ EA+ + + + + D +T +LTA + DL G + G Q+ +
Sbjct: 629 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688
Query: 269 GSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+ +DLY KC G+M +VF+++ D V W M+ GY+ + +AL F +
Sbjct: 689 ATAAVDLYVKC-GEMAKAREVFDKMRHKDAVAWGAMVGGYASNG-HPREALDLFLAMQAE 746
Query: 329 GYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLED 387
G PD + +SAC+ L LG+Q + E N + + AL+ MY+KCG+ +
Sbjct: 747 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGSTVE 805
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
A +F +M + + + N+MI G G A L M ++ + + TF+ +L +C H
Sbjct: 806 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 865
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK 507
TG + +G++YF M ++ P EHY CM+DLL RAG L +A +L++ MP ++ L
Sbjct: 866 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 925
Query: 508 A-------------ANHFLQ----LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
A A H L+ LEP N+ YVML+NIY+ G+WE+ A +R M+ +G
Sbjct: 926 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 985
Query: 551 VQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP---------- 600
V+K P SW+E + ++H F D SHP+ +I+ L+E+ +MK GY P
Sbjct: 986 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1045
Query: 601 --DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVR 658
+KE LVHHSEKLA+AF LL T GE I V KNLR+C DCH AIK +S I REI VR
Sbjct: 1046 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1105
Query: 659 DTYRFHCFKDGRCSCGDYW 677
D RFHCF+DG CSC DYW
Sbjct: 1106 DNNRFHCFRDGSCSCNDYW 1124
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 173/357 (48%), Gaps = 9/357 (2%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H N LL+ YA+ + A+++FD++P P V + LI+AY D GD A+ + ++
Sbjct: 582 HTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARN 641
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
D FT ++TA + +L + + A G V + + Y + G
Sbjct: 642 AFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGE 701
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+ +A+ VF +M KD V+W +MV Y + EAL LF M + + D Y +A L+
Sbjct: 702 MAKAREVFDKMRH-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALS 760
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
A T L L G Q + F N +G+ LID+YAKC G + VF+++ + D++
Sbjct: 761 ACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC-GSTVEAWVVFQQMRKKDII 819
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQIHA 357
+WN MI G + A ++ + G +D +F+ ++ +C++ L + H
Sbjct: 820 VWNAMILGLGMT-GHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 878
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQH 413
+T K+ S RI +V + S+ G L++A +L D MP N V L +++ G H
Sbjct: 879 MT-KLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 934
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA +K H N H+ + L+ LYAKC G + +VF+E+P P V W +I+
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC-GLLHRAQRVFDEMPHPSTVPWTALIT 624
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRS 366
Y + +A+ + G PD + V V++AC+ ++ + + E +
Sbjct: 625 AYMDAGDLR-EAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ V A V +Y KCG + AR +FD+M + V+ +M+ GYA +G EAL LF M
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 743
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
+ P LSAC G + G++ M+ D F + +ID+ + G
Sbjct: 744 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV-DWDEFLDNPVLGTALIDMYAKCGS 802
Query: 487 LTDAERLIEAM 497
+A + + M
Sbjct: 803 TVEAWVVFQQM 813
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +VL C DL TG+++ + V S +++ + LY KCG ++ A F++
Sbjct: 653 TAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 712
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+H D V++ ++ YA G AL LF
Sbjct: 713 RHK-------------------------------DAVAWGAMVGGYASNGHPREALDLFL 741
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + D + ++G ++A + L L +Q + + F + +L+ Y++ G
Sbjct: 742 AMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCG 801
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA VF +M + KD + WN+M++ G A L +M + L+ T +L
Sbjct: 802 STVEAWVVFQQMRK-KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL 860
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ T + G ++ ++ K +H + I ++DL ++ +G +++ ++ +++P P
Sbjct: 861 CSCTHTGLIQDGRRYFHNMTKL-YHISPRIEHYGCMVDLLSR-AGLLQEAHQLVDDMPMP 918
Query: 297 -DLVLWNTMISG 307
+ V+ ++ G
Sbjct: 919 ANAVILGALLGG 930
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 308/557 (55%), Gaps = 35/557 (6%)
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
H L + +D + N SR G ++ A +F ++ E +N+M+ +
Sbjct: 53 HILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEE-PGSFEYNTMIRGNVNSMD 111
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
EAL L+ EM+ + D +T +L A + L L G+Q HAH+ +G + + +G
Sbjct: 112 LEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNG 171
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
LI +Y KC G + VFE++ + + W+++I ++ E + + L ++R G H
Sbjct: 172 LISMYGKC-GAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMW-HECLMLLGDMSREGRH 229
Query: 332 -PDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
++ V +SAC++L SP+LG+ IH + ++ I + V +L+ MY KCG+LE
Sbjct: 230 RAEESILVSALSACTHLGSPNLGRCIHGILLR-NISELNVVVKTSLIDMYVKCGSLEKGL 288
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+F M N S MIAG A HG G EALR+F MLE + P ++ +V VLSAC+H G
Sbjct: 289 CVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAG 348
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-- 507
V EG + F+ M+ +P +HY CM+DL+GRAG L +A LI++MP P + +
Sbjct: 349 LVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSL 408
Query: 508 ---------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA++ +L N Y++LAN+YA + KW VA IR M ++ +
Sbjct: 409 LSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLV 468
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
+ PGFS +E + ++ FV++D S P + I++ +++M ++K GY PD
Sbjct: 469 QTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDED 528
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
K +RL HHS+KLA+AF L+ TS G P+ + +NLR+C DCH KFIS I REITVRD+
Sbjct: 529 EKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDS 588
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FKDG CSC DYW
Sbjct: 589 NRFHHFKDGTCSCKDYW 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----GDMRDCMKVFE 291
S+L S+E+ + HAH++K G +S GS L+ A C+ G M +F
Sbjct: 36 SLLKRCKSMEEFK---KVHAHILKLGLFYDSFCGSNLV---ASCALSRWGSMEYACSIFR 89
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
+I +P +NTMI G + + L + L R G PD+ ++ V+ ACS L +
Sbjct: 90 QIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLER-GIEPDNFTYPFVLKACSLLVALK 148
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G QIHA + + + V N L++MY KCG +E A +F++M E + S +S+I +
Sbjct: 149 EGVQIHAHVFNAGLEVD-VFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAH 207
Query: 411 AQHGIGMEALRLFEWM-LETNIPPTNITFVSVLSACAHTG 449
A + E L L M E VS LSAC H G
Sbjct: 208 ASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLG 247
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 29/269 (10%)
Query: 55 HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTES 114
H FN +VF N L++ Y + I A +F+Q+ + + S++++I A+A
Sbjct: 156 HVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHE 215
Query: 115 ALSLFKDM-REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLL 171
L L DM RE R + L ++A ++ + L + +H + + + V SL+
Sbjct: 216 CLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLI 275
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
Y + G L++ VF M K+ S+ M+ H G EAL++F +M+ L D
Sbjct: 276 DMYVKCGSLEKGLCVFQNMAH-KNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDD 334
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFH-----QNSHIGSG-------LIDLYAKC 279
+L+A + HA L+K GF Q H+ ++DL +
Sbjct: 335 VVYVGVLSACS-----------HAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGR- 382
Query: 280 SGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
+G +++ + + +P +P+ V+W +++S
Sbjct: 383 AGMLKEAYDLIKSMPIKPNDVVWRSLLSA 411
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G+ +H + L+N+ + + I +Y KCG L F H N +S+ V++A A
Sbjct: 252 GRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAI 311
Query: 78 QLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMR 123
R A ++F + + PD V Y ++SA + G + F M+
Sbjct: 312 HGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQ 361
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 294/504 (58%), Gaps = 43/504 (8%)
Query: 210 REGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
R GL AL L EM + D YTL L + L L H+ L+++G + H
Sbjct: 18 RAGLHQRALALLHEMRARGHRADEYTLPPALNSAALLRLPADAL--HSLLLRAGLAAHLH 75
Query: 268 IGSGLIDLYAKCS--GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL 325
+ + L+D YAK S G R VF+E+P+ D+V W ++++G ++ + D AL ++ +
Sbjct: 76 VANALVDAYAKLSRHGAAR---AVFDEMPRRDVVSWTSLLTGLARSRSH-DSALQVYRDM 131
Query: 326 NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
G PD+ + +S+C+ + LG+ +HA +++ + +SV N+LV+MY+K G+
Sbjct: 132 VAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLAL-DPFLSVGNSLVSMYAKTGS 190
Query: 385 LEDARRLFD--RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
L +A+++FD R+ + ++ ++I GYAQ+G G E+L ++ M+ + P +TF+ +L
Sbjct: 191 LGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLL 250
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI-------E 495
AC+H G V G+ +F M+ G P +HY+CM+DLLGRAG+L +A L+ +
Sbjct: 251 FACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTTRLD 310
Query: 496 AMPFNP----------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
A + +A AA +L+P++AVPYVML+N+Y+ +G+W +VA +R
Sbjct: 311 ATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWGDVARVRTS 370
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD---- 601
M+ RG+ K+PG SW+ H+F ED HP E++ +EEM+ +++ GYV D
Sbjct: 371 MKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERIRGQGYVADTAWA 430
Query: 602 --------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
+EK L HHSE+LAVAFGLL+ G PI V KNLR+CGDCH AIK ++ GR
Sbjct: 431 LQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCHAAIKMVAQAYGR 490
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
EI +RD+ FH KDG CSCGDYW
Sbjct: 491 EIVLRDSNCFHHMKDGACSCGDYW 514
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 153/316 (48%), Gaps = 18/316 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
A++ N L+ AYA+ R +AR +FD++P+ D+VS+ +L++ A +SAL +++DM
Sbjct: 72 AHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSALQVYRDM 131
Query: 123 REKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
D F ++ ++ A + L L + +H A+ D + SV NSL++ Y++ G L
Sbjct: 132 VAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSL 191
Query: 181 DEAKRVFYEMGEIK-DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
EAK+VF + D ++W +++V Y Q+ G E+L+++ +MV D T +L
Sbjct: 192 GEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLF 251
Query: 240 A--FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF-EEIPQP 296
A L D G F + + G + + ++DL + +G + + M + +
Sbjct: 252 ACSHAGLVD-AGRAHFRSMQAEHGIAPGADHYACMVDLLGR-AGRLDEAMDLLNRSTTRL 309
Query: 297 DLVLWNTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
D +W +++ + E ++ A +L+ P D ++ SNL G+
Sbjct: 310 DATVWKALLAACRTHRNAELAEHAAAMVWRLD-----PTDAVPYVML---SNLYSRAGRW 361
Query: 355 IHALTIKIEIRSNRIS 370
++ +++ I+
Sbjct: 362 GDVARVRTSMKARGIT 377
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 42/214 (19%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLK-NLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
L +C G L G+S+HA ++ L PF + + N + +Y+K G L A F+ T
Sbjct: 146 ALSSCAGATALELGRSVHAAAVRLALDPFLS-VGNSLVSMYAKTGSLGEAKKVFDAT--- 201
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
++ + D +++ LI YA G +L ++ DM
Sbjct: 202 --------------------------RVDRCDPITWTALIVGYAQNGRGRESLEIYADMV 235
Query: 124 EKRFDTDGFTLSGLITASSN-NLCLIKQLHCLA------IYCGFDHYASVNNSLLTCYSR 176
D T GL+ A S+ L + H + I G DHYA + + L R
Sbjct: 236 RSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLL----GR 291
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G LDEA + D W +++ A HR
Sbjct: 292 AGRLDEAMDLLNRSTTRLDATVWKALLAACRTHR 325
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 223/663 (33%), Positives = 335/663 (50%), Gaps = 105/663 (15%)
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
SL +R F D L S L L + LH +A G V +SLL Y R
Sbjct: 6 SLHHFLRHVSFPPDPHLLPTAFK-SCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLR 64
Query: 177 NGFLDEAKRVFYEMGEI-KDEVSWNSMVVAYGQHREGLEALQLFQEM------------- 222
G A+ +F M + V W+++V A+ + A +L +EM
Sbjct: 65 LGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITW 124
Query: 223 -----------------VSLQ-------LGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
V+L L D ++ L+A + + G Q H + +
Sbjct: 125 NGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAV 184
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK------- 311
K+G ++ + + LID+Y KC G + ++VF+E D+ N +I+G S+
Sbjct: 185 KAGCRADACVVTALIDMYGKC-GQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243
Query: 312 ---EEYSD------------------------QALGCFKKLNRVGYHPDDCSFVCVISAC 344
+E+ D +A+ F+++ G P+ + CV+ A
Sbjct: 244 RLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAF 303
Query: 345 SNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+N++ + G+ H ++ + + V++ALV MY+KCG ++DAR +FD M N VS
Sbjct: 304 ANVAALMHGRSAHCFALRKGFLHD-VYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSW 362
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
N+MI GYA +G + A+ +F ML+ P +TF +L+AC G EG+ YF M +
Sbjct: 363 NAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHN 422
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
+G P EHY+CM+ LLGRAGKL +A LI MPF P + +A
Sbjct: 423 EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAE 482
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
AA LEP NA YV+L+NIYA+ W+ V +R +M+D G++K+ G SWIE+K ++
Sbjct: 483 VAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKV 542
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLA 614
H+ +A D SHPM+ I + +++ +M++ G+VP +K+ L HSEKLA
Sbjct: 543 HMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLA 602
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
VA GL+STS G + V+KNLRICGDCH A+KFIS+ GREI+VRDT RFH F G+CSCG
Sbjct: 603 VALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCG 662
Query: 675 DYW 677
D+W
Sbjct: 663 DFW 665
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 154/318 (48%), Gaps = 33/318 (10%)
Query: 8 TCVGRRDLVT-GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVF 66
+ VG LV+ G+ LH +K A + I +Y KCG + F+++ H +V
Sbjct: 165 SAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVA 224
Query: 67 SFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
S N L+A +R ++ A +LF D+ + ++VS+ ++++ G A+ F++M
Sbjct: 225 SCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREM 284
Query: 123 REKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
+ + + + T+ ++ A +N L+ + HC A+ GF H V+++L+ Y++ G +
Sbjct: 285 QAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRV 344
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A+ +F M ++ VSWN+M+ Y + E + A+ +F M+ + DM T +L A
Sbjct: 345 KDARIIFDTMVS-RNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAA 403
Query: 241 FTSLEDLVGGLQFHAHLIKSGFH-----QNSHIGSGLIDLYAKC-------SGDMRDCMK 288
T A L + G H N + S ++ YA C +G + +
Sbjct: 404 CT-----------QAGLTEEGRHYFKEMHNEYGVSPRMEHYA-CMVTLLGRAGKLDEAYD 451
Query: 289 VFEEIP-QPDLVLWNTMI 305
+ ++P +PD +W +++
Sbjct: 452 LISDMPFEPDAYIWGSLL 469
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/509 (36%), Positives = 291/509 (57%), Gaps = 33/509 (6%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WN+++ Y + A+ L+++M + + YT +L A L L G + H+ ++
Sbjct: 75 WNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIV 134
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
K G + + +GLI LYA C G M +F+E+P+PD W+TM+SGY+Q + + +A
Sbjct: 135 KVGLDFETPLVNGLIKLYAAC-GCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQ-AVEA 192
Query: 319 LGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVA 377
L F+++ D + V+ C +L LGK +H+ K ++ + + + ALV
Sbjct: 193 LKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKID-VVLGTALVG 251
Query: 378 MYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNIT 437
MYSKCG+L++A ++F M E + + ++MIAGYA HG G +AL+LF+ M + P +T
Sbjct: 252 MYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVT 311
Query: 438 FVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
F SVLSAC+H+G V +G + F M + P+ +HY CM+DL RAG + A + I+ M
Sbjct: 312 FTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTM 371
Query: 498 PFNPGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVA 540
P P + + + L+L+PS+ YV+++N+YA+ G+W V
Sbjct: 372 PIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVC 431
Query: 541 TIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV- 599
+R LM+D+ +K+ G+S IE+ +H F+ D SHP ++I+ L +M+RK+KQ G+V
Sbjct: 432 QVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVN 491
Query: 600 -----------PDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFIS 648
+KE L HSE+LA+A+GLL T G PI ++KNLR+C DCH IK IS
Sbjct: 492 STVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLIS 551
Query: 649 AIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+ REI VRD RFH F++ CSC DYW
Sbjct: 552 EVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 210/422 (49%), Gaps = 15/422 (3%)
Query: 58 NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
N TQ + S + +A +A A ++F P+L +NT+I Y+ +A++
Sbjct: 34 NLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIA 93
Query: 118 LFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L++DM + +T ++ A LC ++LH + G D + N L+ Y+
Sbjct: 94 LYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYA 153
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
G +D A +F EM E D SW++MV Y Q+ + +EAL+LF+EM + + D +TLA
Sbjct: 154 ACGCMDYACVMFDEMPE-PDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLA 212
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S++ L L G H+++ K G + +G+ L+ +Y+KC G + + +KVF+ + +
Sbjct: 213 SVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKC-GSLDNALKVFQGMAE 271
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
D+ W+TMI+GY+ + ++AL F + R P+ +F V+SACS+ L ++
Sbjct: 272 RDVTAWSTMIAGYA-IHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSH--SGLVEKG 328
Query: 356 HAL--TIKIEIR-SNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYA 411
H + T+ E + + +I +V ++ + G + A + MP E N V +++
Sbjct: 329 HQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACK 388
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
HG + +L+ + P + +V V + A G+ + + S+MKD P+
Sbjct: 389 THGYKDLGEHISRKILKLD-PSSPENYVLVSNVYASLGRWSSVCQVRSLMKDK---APKK 444
Query: 472 EH 473
+H
Sbjct: 445 QH 446
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 160/370 (43%), Gaps = 69/370 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C L G+ LH+ +K + F L N I LY+ CGC+ A F++
Sbjct: 109 TFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEM 168
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ S++ +++ YA+ G AL LF+
Sbjct: 169 PEPDSASWSTMVSGYAQN-------------------------------GQAVEALKLFR 197
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ + +D FTL+ ++ + L L K +H G + +L+ YS+ G
Sbjct: 198 EMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCG 257
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD A +VF M E +D +W++M+ Y H G +ALQLF M + + T S+L
Sbjct: 258 SLDNALKVFQGMAE-RDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVL 316
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMRD 285
+A + H+ L++ G Q H G ++DL+ + +G +
Sbjct: 317 SACS-----------HSGLVEKGHQIFETMWTEYKITPQIKHYGC-MVDLFCR-AGMVGH 363
Query: 286 CMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISA 343
K + +P +P++VLW T++ G + Y D +K+ ++ P++ V
Sbjct: 364 AHKFIQTMPIEPNVVLWRTLL-GACKTHGYKDLGEHISRKILKLDPSSPENYVLV----- 417
Query: 344 CSNLSPSLGK 353
SN+ SLG+
Sbjct: 418 -SNVYASLGR 426
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 328/602 (54%), Gaps = 37/602 (6%)
Query: 109 CGDTESALSLFKDMR-EKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYAS 165
C AL +F+ E F T LI A ++ +K+L + GF+
Sbjct: 109 CKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQY 168
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ N +L + + G + +A R+F EM ++ VSW +++ Y +EA +LF M
Sbjct: 169 MRNRVLLMHVKCGMMIDACRLFDEM-PARNAVSWGTIISGYVDSGNYVEAFRLFILMREE 227
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
T A+++ A LE + G Q H+ IK+G Q+ + LID+Y+KC G + D
Sbjct: 228 FYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKC-GSLED 286
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VF+E+P +V WN++I+GY+ YS++AL + ++ G D +F +I CS
Sbjct: 287 AHCVFDEMPDKTIVGWNSIIAGYAL-HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICS 345
Query: 346 NL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L S + KQ+HA ++ + ++ N ALV YSK G ++DAR +FDRM N +S N
Sbjct: 346 RLASVARAKQVHASLVRNGFGLDVVA-NTALVDFYSKWGKVDDARHVFDRMSCRNIISWN 404
Query: 405 SMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
++IAGY HG G EA+ +FE ML + P ++TF++VLSAC+ +G G + F M
Sbjct: 405 ALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRD 464
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK-- 507
+P H++CMI+LLGR G L +A LI PF P G++ L
Sbjct: 465 HKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKF 524
Query: 508 AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMH 567
AA +EP Y++L NIY +SGK +E A + + ++ +G++ P SWIEV Q H
Sbjct: 525 AAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPH 584
Query: 568 VFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAV 615
F++ D H I+++ ++E+ + + GYVP+ +EK ++HSEKLA+
Sbjct: 585 AFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMYHSEKLAI 644
Query: 616 AFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
A+GLL+T P+ ++++ RIC DCH+ IK I+ I REI +RD RFH F+DG CSCGD
Sbjct: 645 AYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGD 704
Query: 676 YW 677
YW
Sbjct: 705 YW 706
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +++ G + G+ LH+ +K + ++S I +YSKCG L AH
Sbjct: 235 TFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAH------ 288
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+FD++P +V +N++I+ YA G +E AL L+
Sbjct: 289 -------------------------CVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYH 323
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR+ D FT S +I S ++ KQ+H + GF N +L+ YS+ G
Sbjct: 324 EMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWG 383
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A+ VF M ++ +SWN+++ YG H G EA+ +F++M+ + + T ++L
Sbjct: 384 KVDDARHVFDRMS-CRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVL 442
Query: 239 TA 240
+A
Sbjct: 443 SA 444
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 298/511 (58%), Gaps = 39/511 (7%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAHL 257
WN+M+ Y + EA+ L+ M++ + + +T +L + L L G + H+H+
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
IK GF + + + LI LY+ G++ +F+E DLV +NTMI GY++ + +
Sbjct: 62 IKHGFESDLFVRNALIHLYS-VFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQ-PES 119
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALV 376
AL F ++ + D+ + V V+SAC+ L LGK+++ I+ + + + A++
Sbjct: 120 ALCLFGEMQ----NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVM 175
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSL--NSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
MY+KCG+++ A +F R+ ++ NSMIAG AQHG+G A+ +F ++ T + P
Sbjct: 176 DMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPD 235
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+TFV VL AC H+G + EG+K F M + +G +P+ EHY CM+DLLGR G L +A L+
Sbjct: 236 EVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLV 295
Query: 495 EAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ MPF S+ + A L++E + YV+L+NI A + +WE
Sbjct: 296 QKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWE 355
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
E +R++M D G++K PG+S+IE+ +H FVA D SHP KEI L++M+ ++K AG
Sbjct: 356 EARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAG 415
Query: 598 YVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YVP +KE + +HSEKLA+AFGL+ S + I ++KNLRIC DCH A K
Sbjct: 416 YVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFK 475
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
+S I GREITVRDT RFH F++G CSC D+
Sbjct: 476 LVSEIYGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 26/285 (9%)
Query: 40 FILLYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIP 92
F L + C LS+ H +++F N L+ Y+ + AR LFD+
Sbjct: 38 FPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESL 97
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQ 150
DLVSYNT+I YA+ ESAL LF +M+ ++D TL +++A + L K+
Sbjct: 98 VRDLVSYNTMIKGYAEVNQPESALCLFGEMQ----NSDEVTLVAVLSACARLGAFDLGKR 153
Query: 151 LHCLAIYCG-FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGE-IKDEVSWNSMVVAYGQ 208
L+ I G F+ + +++ Y++ G +D A +F +G+ +K +NSM+ Q
Sbjct: 154 LYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQ 213
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-----FHAHLIKSGFH 263
H G A+ +F+E++S L D T +L A + G + F+A+ IK
Sbjct: 214 HGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKP--- 270
Query: 264 QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
Q H G ++DL + G + + + +++P + + V+W ++S
Sbjct: 271 QMEHYGC-MVDLLGR-YGCLEEAYDLVQKMPFEANSVIWRALLSA 313
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 6/192 (3%)
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
+WNTMI GYS+ + + + + + P++ +F ++++C+ LS G ++H+
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
IK S+ + V NAL+ +YS GNL AR LFD + VS N+MI GYA+
Sbjct: 61 IIKHGFESD-LFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES 119
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
AL LF M ++ +T V+VLSACA G G++ + + F + ++
Sbjct: 120 ALCLFGEMQNSD----EVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVM 175
Query: 479 DLLGRAGKLTDA 490
D+ + G + A
Sbjct: 176 DMYAKCGSIDSA 187
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 318/572 (55%), Gaps = 35/572 (6%)
Query: 137 LITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
L+ + L L+ Q+H I G+ + LL G + +++F + D
Sbjct: 17 LLLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPN-PDS 75
Query: 197 VSWNSMVVAYGQ-HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
+ S++ + + H + +L + MV + YT S++ + L L G H
Sbjct: 76 FLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHG 135
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
H++ +GF + ++ + L+ Y KC G + + KVF+++ +V WN+MISGY Q ++
Sbjct: 136 HVLVNGFGSDVYVQTALMSFYGKC-GVLCNARKVFDKMRDRSVVTWNSMISGYEQNG-FA 193
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
+A+ F ++ +G P+ +FV V+SAC++L LG +H + + N + + +
Sbjct: 194 KEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLN-VVLGTS 252
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L+ MY++CGN+ AR +FD M E N V+ +MI+GY +G G +A+ LF M + P
Sbjct: 253 LINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPN 312
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ITFV+VLSACAH G V EG++ F M++ + PE EH+ C++D+LGRAG L +A I
Sbjct: 313 SITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFI 372
Query: 495 EAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ + P + + A H L EP N YV+L+NIYA +G+ +
Sbjct: 373 KEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMD 432
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V +R M + ++K+ G+S I++ ++ ++F D SH EI++YL+++ RK ++AG
Sbjct: 433 QVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAG 492
Query: 598 YVPDKEK------------RLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV + L +HSEKLA+AFGLL TS G I ++KNLR+C DCH+AIK
Sbjct: 493 YVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIK 552
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+IS I+ REI VRD RFH FK+G CSC DYW
Sbjct: 553 YISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K+C L G+ +H L N Y+ + Y KCG L
Sbjct: 113 TFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVL---------- 162
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+AR++FD++ +V++N++IS Y G + A+ LF
Sbjct: 163 ---------------------CNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFD 201
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+E + + T +++A ++ I +H A+ G D + SL+ Y+R G
Sbjct: 202 RMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCG 261
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A+ VF M E ++ V+W +M+ YG + G +A++LF EM L + T ++L
Sbjct: 262 NVSKAREVFDSMKE-RNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVL 320
Query: 239 TA 240
+A
Sbjct: 321 SA 322
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 82/228 (35%), Gaps = 53/228 (23%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C + G +H + N + + L I +Y++CG
Sbjct: 214 TFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCG------------ 261
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ AR++FD + + ++V++ +IS Y G A+ LF
Sbjct: 262 -------------------NVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS----------- 169
+MR + T +++A + H + G + S+
Sbjct: 303 EMRRNGLLPNSITFVAVLSACA---------HAGLVNEGRRVFESMREEYRLVPEVEHHV 353
Query: 170 -LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-GLEA 215
L+ R G LDEA E+ E W +M+ A H+ GL A
Sbjct: 354 CLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGA 401
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 226/688 (32%), Positives = 339/688 (49%), Gaps = 101/688 (14%)
Query: 87 LFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSN--- 143
LFD++P + L + + ES L L++ MR TD FT L +
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 144 NLCLIKQLHCLAIYCGFDHYAS-VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV----- 197
++ L + LH V+N ++ Y G +A+R F ++ +KD V
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDI-PVKDAVAWTTV 177
Query: 198 --------------------------SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
SW ++ Y + EA+ F M+S + D
Sbjct: 178 ISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDE 237
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ +L+A L+DLV G H + + G + + LID+YAKC GD+ +VF+
Sbjct: 238 VTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKC-GDIGRAWEVFD 296
Query: 292 EI-----PQP---------------------------DLVLWNTMISGYSQKEEYSDQAL 319
+ PQ DLV +N++I+GY +AL
Sbjct: 297 ALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLR-EAL 355
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAM 378
F ++ R D+ + V +++AC++L G+ +HA I+ + I + AL+ M
Sbjct: 356 LLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHA-CIEQRLVEVDIYLGTALLDM 414
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y KCG +E+A +F M + + ++MIAG A +G+G AL F WM P ++T+
Sbjct: 415 YLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTY 474
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+++L+AC+H+ + EG+ YF M+ + P EHY CMIDLLGR+G L +A L+ MP
Sbjct: 475 IAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMP 534
Query: 499 FNPGSI-----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P ++ A AA H L+LEP YV L NIY S +WE+ +
Sbjct: 535 MQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQ 594
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP- 600
IRRLM +RGV+K G+S I V Q+H F+ D +HP I EI +EE++R++K GY P
Sbjct: 595 IRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPI 654
Query: 601 -----------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
+KE L+ HSEK+A+AFGL+S + P+ ++KNLR+C DCH+AIK IS
Sbjct: 655 TSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISR 714
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I REI VRD RFH F+DG CSC D+W
Sbjct: 715 IWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 174/382 (45%), Gaps = 39/382 (10%)
Query: 1 TFRQVLKTCV-GRRDLVTGKSLHALYLKNLVPFSAYL-SNHFILLYSKCGCLSAAHHAFN 58
TF + K C GR ++ + LHA + ++P + L SN I +Y + G A AF+
Sbjct: 105 TFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFD 164
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ ++ +++ A+ + A L P +++S+ LIS Y+ G A+
Sbjct: 165 DIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDC 224
Query: 119 FKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLA-----------IYCGFDHYAS 165
F M + D T+ GL++A + +L + LH L + D YA
Sbjct: 225 FNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAK 284
Query: 166 VN---------------------NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVV 204
N+++ Y + G +D A+ +F +M E +D V++NS++
Sbjct: 285 CGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQM-EDRDLVTFNSLIT 343
Query: 205 AYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
Y EAL LF +M L D +T+ S+LTA SL L G HA + +
Sbjct: 344 GYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEV 403
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ ++G+ L+D+Y KC G + + VF+ + D+ W+ MI+G + AL F
Sbjct: 404 DIYLGTALLDMYLKC-GRVEEASLVFQAMSVRDVHTWSAMIAGLAFN-GMGKAALEYFFW 461
Query: 325 LNRVGYHPDDCSFVCVISACSN 346
+ G+ P+ +++ +++ACS+
Sbjct: 462 MKVDGFQPNSVTYIAILTACSH 483
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 27/318 (8%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L C +DLV G+SLH L + + S L I +Y+KCG + A F+
Sbjct: 243 LLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGR 302
Query: 65 -VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
S+N ++ Y + + AR LFDQ+ DLV++N+LI+ Y G AL LF MR
Sbjct: 303 RPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMR 362
Query: 124 EKRFDTDGFTLSGLITASSN----------NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
D FT+ L+TA ++ + C+ ++L + IY G +LL
Sbjct: 363 RHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLG--------TALLDM 414
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y + G ++EA VF M ++D +W++M+ + G AL+ F M + T
Sbjct: 415 YLKCGRVEEASLVFQAM-SVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVT 473
Query: 234 LASILTA--FTSLEDLVGGLQFHA-HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
+ILTA + L D G L F L+ + H G +IDL + SG + + M +
Sbjct: 474 YIAILTACSHSCLLD-EGRLYFEEMRLLHNIRPLIEHYGC-MIDLLGR-SGLLDEAMDLV 530
Query: 291 EEIP-QPDLVLWNTMISG 307
+P QP+ V+W +++S
Sbjct: 531 RTMPMQPNAVIWASILSA 548
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 252 QFHAHLIKSG--FH--QNSHIGSGLIDLYAKCSG-DMRDCMKVFEEIPQPDLVLWNTMIS 306
+ HA L+ SG H SH+ + L++ + +R + +F+ +P L++T +
Sbjct: 17 ELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTF-LFDTALR 75
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS--LGKQIHALTIKIEI 364
+ + L ++++ R G D +F + C+ L + +HA + +
Sbjct: 76 ACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTML 135
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRM----------------------------- 395
S V+N ++ MY + G DARR FD +
Sbjct: 136 PSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLR 195
Query: 396 --PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAE 453
P N +S +I+GY++ G EA+ F ML I P +T + +LSACA +
Sbjct: 196 HSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVF 255
Query: 454 GQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G+ ++ + G G+ +ID+ + G + A + +A+
Sbjct: 256 GRSLHKLVGEK-GMLMSGKLVVALIDMYAKCGDIGRAWEVFDAL 298
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 48/236 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L G++LHA + LV YL + +Y KCG
Sbjct: 372 TMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCG------------ 419
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R+ A +F + D+ +++ +I+ A G ++AL F
Sbjct: 420 -------------------RVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFF 460
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ----------LHCLAIYCGFDHYASVNNSL 170
M+ F + T ++TA S++ CL+ + LH I +HY + + L
Sbjct: 461 WMKVDGFQPNSVTYIAILTACSHS-CLLDEGRLYFEEMRLLH--NIRPLIEHYGCMIDLL 517
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
R+G LDEA + M + V W S++ A H++ A + ++ L+
Sbjct: 518 ----GRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLE 569
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 326/591 (55%), Gaps = 32/591 (5%)
Query: 115 ALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLL 171
++SL++ M D F+ I S +L L +QLHC G + V +L+
Sbjct: 37 SISLYRSMLRSGSSPDAFSFP-FILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKD-EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y + G + +A++VF E + V +N+++ Y + + +A +F+ M + +D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T+ ++ T E L G H +K G + + I +Y KC G + ++F
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC-GSVEAGRRLF 214
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SP 349
+E+P L+ WN +ISGYSQ D L ++++ G PD + V V+S+C++L +
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYD-VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G ++ L N + V+NA ++MY++CGNL AR +FD MP + VS +MI
Sbjct: 274 KIGHEVGKLVESNGFVPN-VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Y HG+G L LF+ M++ I P FV VLSAC+H+G +G + F MK + EP
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP 392
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHF 512
EHYSC++DLLGRAG+L +A IE+MP P +A A
Sbjct: 393 GPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKV 452
Query: 513 LQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAE 572
++ EP+N YV+++NIY+ S E + IR +MR+R +KKPG+S++E K ++H+F+A
Sbjct: 453 IEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAG 512
Query: 573 DGSHPMIKEIHNYLEEM-SRKMKQAGYVP-DKEKRLV----HHSEKLAVAFGLLSTSYGE 626
D SH +E+H L+E+ + M+ AG + D+ + + HSE+LA+AFG+L++ G
Sbjct: 513 DRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGT 572
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
ILV+KNLR+C DCH +K +S I R+ VRD RFH FKDG CSC DYW
Sbjct: 573 EILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 180/366 (49%), Gaps = 31/366 (8%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
E++ L++ M+ D ++ IL + SL V G Q H H+ K G + + LI
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDL--VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYH 331
+Y KC G + D KVFEE PQ V +N +ISGY+ + +D A F+++ G
Sbjct: 96 SMYCKC-GLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAY-MFRRMKETGVS 153
Query: 332 PDDCSFVCVISACSNLSPS---LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
D + + ++ C+ P LG+ +H +K + S ++V N+ + MY KCG++E
Sbjct: 154 VDSVTMLGLVPLCT--VPEYLWLGRSLHGQCVKGGLDSE-VAVLNSFITMYMKCGSVEAG 210
Query: 389 RRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHT 448
RRLFD MP ++ N++I+GY+Q+G+ + L L+E M + + P T VSVLS+CAH
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 449 GKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP------- 501
G G + +++ GF P + I + R G L A + + MP
Sbjct: 271 GAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 502 ---------GSIALKAANHFLQ--LEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRG 550
G I L + ++ + P AV +VM+ + + SG ++ + R M+ R
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAV-FVMVLSACSHSGLTDKGLELFRAMK-RE 387
Query: 551 VQKKPG 556
+ +PG
Sbjct: 388 YKLEPG 393
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 200/463 (43%), Gaps = 48/463 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F +LK+C V+G+ LH K ++ I +Y KCG
Sbjct: 55 SFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL----------- 103
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVS--YNTLISAYADCGDTESALSL 118
+A AR++F++ PQ +S YN LIS Y A +
Sbjct: 104 --------------------VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYM 143
Query: 119 FKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M+E D T+ GL+ + L L + LH + G D +V NS +T Y +
Sbjct: 144 FRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ +R+F EM +K ++WN+++ Y Q+ + L+L+++M S + D +TL S
Sbjct: 204 CGSVEAGRRLFDEM-PVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L++ L G + + +GF N + + I +YA+C G++ VF+ +P
Sbjct: 263 VLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC-GNLAKARAVFDIMPVK 321
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSLGKQ 354
LV W MI Y + L F + + G PD FV V+SACS+ L+ +
Sbjct: 322 SLVSWTAMIGCYGM-HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 355 IHALT--IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYA 411
A+ K+E S LV + + G L++A + MP E + +++
Sbjct: 381 FRAMKREYKLEPGPEHYS---CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
H A F ++E P NI + ++S K EG
Sbjct: 438 IHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEG 478
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 345/651 (52%), Gaps = 47/651 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V++ N L+A YA+ + A ++FD +P D+V++N ++ Y G AL+ F++M
Sbjct: 141 DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMH 200
Query: 124 ---EKRFDTDGFTLSGLITASSNNLCLI------KQLHCLAIYCGFDHYASVNNSLLTCY 174
E + D+ G I A+ CL K++H I G + V SLL Y
Sbjct: 201 DALEVQHDSVG------IIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMY 254
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G + A+ VF M ++ V+WN M+ Y + EA F +M + L +++ T
Sbjct: 255 CKCGEVAYARSVFATM-PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTA 313
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L A E + G H ++++ F + + + L+++Y K G + K+F +I
Sbjct: 314 INLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKV-GKVESSEKIFGKIA 372
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGK 353
LV WN MI+ Y KE Y+ +A+ F +L +PD + V+ A L S +
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYT-EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCR 431
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIH+ I + N + + NA++ MY++ G++ +R +FD+M + +S N+MI GYA H
Sbjct: 432 QIHSYIIGLGYAENTL-IMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIH 490
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G AL +F+ M + P TFVSVL+AC+ +G V EG +F++M +G P+ EH
Sbjct: 491 GQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEH 550
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y CM DLLGR G L + + IE+MP +P S IA AA QLE
Sbjct: 551 YGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLE 610
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
N Y++L+++YA +G+WE+V +R LM+++G+++ S +E+ F D SH
Sbjct: 611 HDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSH 670
Query: 577 PMIKEIHNYLEEMSRKMK-------QAGYVPDKEKRLV---HHSEKLAVAFGLLSTSYGE 626
+ IH + +SRK+K Q+ VP + HS +LAV FGL+S+ G
Sbjct: 671 SQSRTIHEVSDILSRKIKETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGS 730
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PILV KN+RIC CH+A+K IS +GR I V D+ +H F DG C CGDYW
Sbjct: 731 PILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 215/435 (49%), Gaps = 17/435 (3%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ + A + R+ A + + PD +N +I +AD G AL+ ++ M E D
Sbjct: 47 LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106
Query: 131 GFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT ++ A L + H + I G +H NSL+ Y++ G +++A+RVF
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTA----FTS 243
M ++D V+WN MV Y + G AL FQEM +L++ D + + L A F+S
Sbjct: 167 GM-PVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSS 225
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
++ G + H ++I+ G Q+ +G+ L+D+Y KC G++ VF +P +V WN
Sbjct: 226 MQ----GKEIHGYVIRHGLEQDIKVGTSLLDMYCKC-GEVAYARSVFATMPLRTVVTWNC 280
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKI 362
MI GY+ E D+A CF ++ G + + + +++AC+ SL G+ +H ++
Sbjct: 281 MIGGYALNER-PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR 339
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
+ + + + AL+ MY K G +E + ++F ++ VS N+MIA Y + EA+ L
Sbjct: 340 QFLPH-VVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F +L + P T +V+ A G + ++ S + + G+ + ++ +
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGL-GYAENTLIMNAVLHMYA 457
Query: 483 RAGKLTDAERLIEAM 497
R+G + + + + M
Sbjct: 458 RSGDVVASREIFDKM 472
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 160/341 (46%), Gaps = 34/341 (9%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C + GK +H +++ + + + +Y KCG ++ A F V
Sbjct: 216 LAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTV 275
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDL-VSYNTLISAYADCGDTESALSLFKDMRE 124
++N ++ YA R A F Q+ L V T I+ A C TES+L
Sbjct: 276 VTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSL-------- 327
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
+ +H + F + + +LL Y + G ++ ++
Sbjct: 328 ----------------------YGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSE 365
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
++F ++ K VSWN+M+ AY EA+ LF E+++ L D +T+++++ AF L
Sbjct: 366 KIFGKIAN-KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLL 424
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L Q H+++I G+ +N+ I + ++ +YA+ SGD+ ++F+++ D++ WNTM
Sbjct: 425 GSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYAR-SGDVVASREIFDKMVSKDVISWNTM 483
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
I GY+ + AL F ++ G P++ +FV V++ACS
Sbjct: 484 IMGYAIHGQ-GKTALEMFDEMKYNGLQPNESTFVSVLTACS 523
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+ +LV + G +++A + + N MI G+A G+ AL + MLE
Sbjct: 44 SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P TF V+ CA G + EG+ M+ + G E + + ++ + G + DAE
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKL-GLEHDVYTCNSLVAFYAKLGLVEDAE 162
Query: 492 RLIEAMP 498
R+ + MP
Sbjct: 163 RVFDGMP 169
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 311/545 (57%), Gaps = 25/545 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
NVFS LL YA+ R A +LFD +P+ + VS+N L++ Y + G A+ LF +M
Sbjct: 135 NVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEME 194
Query: 124 EKRFDTDGFTLSGLITASSNNLC-LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
+ F D T + L+T +++ C L+ QLH + G V N+ +T YS+ G L
Sbjct: 195 REGFLPDEATFAALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALAN 254
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAF 241
++R+F E+G+ D +SWN+M+ AY H EA++ F M+ + DMY+ SI++A
Sbjct: 255 SRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISAC 314
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEIPQPDLV 299
D GG H + K+GF +H+ + LI +Y + S + M D K F+ + D V
Sbjct: 315 AEHRDH-GGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTV 373
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN+M++GYSQ +D AL F+ + D+ +F + +CS+L+ LG+QIH L
Sbjct: 374 SWNSMLTGYSQHGLSAD-ALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGL 432
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
I+ SN V+++L+ MYSK G L+DA + F+ + ++V NSM+ GYAQHG
Sbjct: 433 VIRSGFASNNF-VSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQA 491
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
LF MLE +P +ITFV +++AC+H G V EG + + M+ +G EHY+C I
Sbjct: 492 VRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGI 551
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAV 521
DL GRAG+L A+ LI++MPF P + +A A+H L+ EP
Sbjct: 552 DLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHS 611
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKE 581
YV+L+N+Y+ G W + A +++ M+++G+ K PG+SWIEVK ++H F AEDGSHP + E
Sbjct: 612 TYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDE 671
Query: 582 IHNYL 586
I+ L
Sbjct: 672 IYEML 676
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 233/483 (48%), Gaps = 32/483 (6%)
Query: 68 FNVLLAAYA-RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR 126
+N LL AY+ +A+AR+LFD+IP+ D S+N+L++A+ G +A L + M E+
Sbjct: 37 WNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERG 96
Query: 127 FDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
+ F L + +++ C L QLH LA+ G +LL Y++ G +A
Sbjct: 97 LAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDAC 156
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
R+F M E ++ VSWN++V Y + + A+QLF EM D T A++LT
Sbjct: 157 RLFDGMPE-RNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDS 215
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQPDLVLWNT 303
+ Q H ++K G + + I Y++C G + + ++F+EI + DL+ WN
Sbjct: 216 TCFLMH-QLHGKIVKYGSALGLIVLNAAITAYSQC-GALANSRRIFDEIGDRSDLISWNA 273
Query: 304 MISGYSQKEEYSDQALGCFKKLNRV-GYHPDDCSFVCVISACSNLSPSLGKQIHALTIKI 362
M+ Y+ +A+ F + R G PD SF +ISAC+ G IH L K
Sbjct: 274 MLGAYA-THGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRDHGGTVIHGLVSKN 332
Query: 363 EIRSNRISVNNALVAMYSKCGN---LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
V NAL+AMY++ +EDA + FD + +TVS NSM+ GY+QHG+ +A
Sbjct: 333 GFE-GVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADA 391
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LR F M NI F + L +C+ + G++ ++ GF S +I
Sbjct: 392 LRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRS-GFASNNFVSSSLIF 450
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
+ ++G L DA + E + + S++VP+ + YA GK + V
Sbjct: 451 MYSKSGILDDAMKSFE------------------EADKSSSVPWNSMMFGYAQHGKAQAV 492
Query: 540 ATI 542
++
Sbjct: 493 RSL 495
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 182/388 (46%), Gaps = 51/388 (13%)
Query: 21 LHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT-QHANVFSFNVLLAAYARQL 79
LH +K + N I YS+CG L+ + F++ +++ S+N +L AYA
Sbjct: 223 LHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHG 282
Query: 80 RIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTL 134
A + F + QPD+ S+ ++ISA A E R D G +
Sbjct: 283 MEHEAMRFFASMMRASGVQPDMYSFTSIISACA----------------EHR-DHGGTVI 325
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMG 191
GL++ + GF+ V N+L+ Y+R N +++A + F +
Sbjct: 326 HGLVSKN-----------------GFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSL- 367
Query: 192 EIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGL 251
+KD VSWNSM+ Y QH +AL+ F+ M S + D Y ++ L + + L L G
Sbjct: 368 LLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGR 427
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQK 311
Q H +I+SGF N+ + S LI +Y+K SG + D MK FEE + V WN+M+ GY+Q
Sbjct: 428 QIHGLVIRSGFASNNFVSSSLIFMYSK-SGILDDAMKSFEEADKSSSVPWNSMMFGYAQH 486
Query: 312 EEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSN---R 368
+ + F ++ + D +FV +I+ACS+ L + + +E R R
Sbjct: 487 GK-AQAVRSLFNQMLELKVPLDHITFVGLITACSH--AGLVDEGSEILNTMESRYGIPLR 543
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ + +Y + G L+ A+ L D MP
Sbjct: 544 MEHYACGIDLYGRAGQLDKAKELIDSMP 571
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 42/211 (19%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F L++C L G+ +H L +++ + ++S+ I +YSK G L
Sbjct: 410 FSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILD---------- 459
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A + F++ + V +N+++ YA G ++ SLF
Sbjct: 460 ---------------------DAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQ 498
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTCY 174
M E + D T GLITA S+ + + L I +HYA + Y
Sbjct: 499 MLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACG----IDLY 554
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
R G LD+AK + M D + W +++ A
Sbjct: 555 GRAGQLDKAKELIDSMPFEPDAMVWMTLLGA 585
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/564 (35%), Positives = 311/564 (55%), Gaps = 39/564 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYG 207
++Q+H I G+ S+ L+T + +F + + D+ +NS++ +
Sbjct: 25 LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV-PLPDDFLFNSVIKSTS 83
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ R L + ++ M+S + YT S++ + L L G H H + SGF +++
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR 327
+ + L+ Y+KC GDM +VF+ +P+ +V WN+++SG+ Q +D+A+ F ++
Sbjct: 144 VQAALVTFYSKC-GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG-LADEAIQVFYQMRE 201
Query: 328 VGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLE 386
G+ PD +FV ++SAC+ SLG +H I + N + + AL+ +YS+CG++
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN-VKLGTALINLYSRCGDVG 260
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP-PTNITFVSVLSAC 445
AR +FD+M E N + +MI+ Y HG G +A+ LF M + P P N+TFV+VLSAC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA 505
AH G V EG+ + M + P EH+ CM+D+LGRAG L +A + I + + A
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 506 --------------------LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
++ A + LEP N +VML+NIYA SGK +EV+ IR
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP----- 600
M ++K+ G+S IEV+ + ++F D SH EI+ YLE + + K+ GY P
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 601 -------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
+KE L +HSEKLAVAFGLL T I ++KNLRIC DCH+A K+IS ++ R
Sbjct: 501 MHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNR 559
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
+ITVRD RFH F++G CSC DYW
Sbjct: 560 QITVRDKLRFHHFQNGSCSCLDYW 583
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 34/224 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K+C L GK +H + + Y+ + YSKCG + A
Sbjct: 109 TFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGA------- 161
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
RQ+FD++P+ +V++N+L+S + G + A+ +F
Sbjct: 162 ------------------------RQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFY 197
Query: 121 DMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE F+ D T L++A + + L +H I G D + +L+ YSR G
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG 257
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
+ +A+ VF +M E + +W +M+ AYG H G +A++LF +M
Sbjct: 258 DVGKAREVFDKMKE-TNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 40/234 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L C + G +H + + + L I LYS+CG + A F++
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
+ NV ++ +++AY A +LF+++ P P+ V++ ++SA A G E
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
S++K M + LI +++C++ L
Sbjct: 330 RSVYKRMTKSY---------RLIPGVEHHVCMVDML-----------------------G 357
Query: 176 RNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
R GFLDEA + +++ G+ W +M+ A HR +++ + +++L+
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 313/559 (55%), Gaps = 25/559 (4%)
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
+ +N LL+ Y+R + A ++FD +P D +S+N+ IS GD E +FK + E
Sbjct: 89 IVVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYE 148
Query: 125 KR-FDTDGFTLSGLITASSN-NLCLI-KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ D TL+ ++TA C + K +H L G++ +V N+L+T Y R G
Sbjct: 149 SGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCS 208
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+RVF EM E K+ V+W +++ Q + E+L+LF +M + + T S L A
Sbjct: 209 SGRRVFDEMSE-KNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMAC 267
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ L+ + G Q H + K G H + I S L+D+Y+KC G + D K+FE + D V
Sbjct: 268 SGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKC-GSLEDAWKIFESAEEVDEVSM 326
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTI 360
++ G +Q + ++++ F K+ + G D ++ + S +LGKQIH+L I
Sbjct: 327 TVILVGLAQNG-FEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLII 385
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K SN VNN L+ MYSKCG+L+D+ ++F MP+ N+VS NSMIA +A+HG G AL
Sbjct: 386 KKSFGSNYF-VNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRAL 444
Query: 421 RLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
+L+E M + PT++TF+S+L ACAH G V +G + M +G P EHY+C++D+
Sbjct: 445 QLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDM 504
Query: 481 LGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPY 523
+GRAG L +A++ IE +P PG + + AAN P + PY
Sbjct: 505 MGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPY 564
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
++LANIY++ GKW+E A + M+D GV K+ G SWIE++KQ+H FV ED HP + I+
Sbjct: 565 ILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIY 624
Query: 584 NYLEEMSRKMKQAGYVPDK 602
L E+ + M GYVPDK
Sbjct: 625 GVLGELFKLMMDEGYVPDK 643
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 38/326 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L C G + + G+ +H L K V F + + + +YSKCG L A F
Sbjct: 259 TYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESA 318
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + S V+L A+ + Q+F ++ + +V +ISA L +F
Sbjct: 319 EEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISA---------ILGVF- 368
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
G+ T+ L L KQ+H L I F VNN L+ YS+ G L
Sbjct: 369 ---------------GIDTS----LALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDL 409
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
D++ ++F M + ++ VSWNSM+ A+ +H G ALQL++EM + T S+L A
Sbjct: 410 DDSIKIFCWMPQ-RNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHA 468
Query: 241 FTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ-PDL 298
+ + G+ F + K G + ++D+ + +G + + K E +P+ P +
Sbjct: 469 CAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGR-AGLLNEAKKFIERLPEKPGI 527
Query: 299 VLWNTM-----ISGYSQKEEYSDQAL 319
++W + I G S+ +Y+ L
Sbjct: 528 LVWQALLGACSIHGNSEMGKYAANQL 553
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 207/617 (33%), Positives = 341/617 (55%), Gaps = 37/617 (5%)
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLS-GLITASSNNLCLI-KQ 150
Q S+N + A + AL+L+ M + FT + +S +L L Q
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 151 LHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD-EVSWNSMVVAYGQH 209
LH I G + V SL++ Y + + A++VF E ++ V +N+++ Y +
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 210 REGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG 269
+A+ LF++M + ++ T+ ++ L G HA ++ G + +G
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 270 SGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG 329
+ L+ +Y +C G + K+F+ +P+ L+ WN MISGY+Q + L ++K+ G
Sbjct: 198 NCLLTMYVRC-GSVDFARKLFDGMPEKGLITWNAMISGYAQNG-LAGHVLDLYRKMEFTG 255
Query: 330 YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRIS--VNNALVAMYSKCGNLE 386
PD + V V+S+C++L + G+++ +IE+ + + NAL+ MY++CGNL
Sbjct: 256 IVPDPVTLVGVLSSCAHLGAHAAGREVEQ---RIELSGFGFNPFLKNALINMYARCGNLV 312
Query: 387 DARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
AR +FD M E N +S ++IAGY HG G A++LF+ M+ ++ P FVSVLSAC+
Sbjct: 313 KARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACS 372
Query: 447 HTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS--- 503
H G +G YF+ M+ +G +P EHYSC++DLLGRAG+L +A +LI +M P
Sbjct: 373 HAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVW 432
Query: 504 --------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDR 549
+A A ++ EP+N YV+L+NI++ +G E + +R +MR+R
Sbjct: 433 GALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRER 492
Query: 550 GVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKR---- 605
++K+PG S++E + ++H+F+A D +HP +EI++ L+ + +K+ G D ++
Sbjct: 493 KLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRNE 552
Query: 606 -----LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+ HSEKLA+AFGL++T G I V+KNLR+CGDCH +K +S I R++ VRD
Sbjct: 553 ELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDA 612
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FK+G CSC DYW
Sbjct: 613 TRFHHFKNGVCSCKDYW 629
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 202/450 (44%), Gaps = 44/450 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF K+C + G LH +K ++ I +Y KC +++A F++
Sbjct: 58 TFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDEN 117
Query: 61 QHANVFS--FNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
H+ + +N L+A Y +L S ++D A+ L
Sbjct: 118 HHSRNLAVCYNALIAGY-------------------------SLNSRFSD------AVLL 146
Query: 119 FKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ MR++ + T+ GLI A +L LH ++ G D SV N LLT Y R
Sbjct: 147 FRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVR 206
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +D A+++F M E K ++WN+M+ Y Q+ L L+++M + D TL
Sbjct: 207 CGSVDFARKLFDGMPE-KGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVG 265
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L++ L G + + SGF N + + LI++YA+C G++ +F+ + +
Sbjct: 266 VLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARC-GNLVKARAIFDGMTEK 324
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+++ W +I+GY + + A+ F ++ PD +FV V+SACS+ + K ++
Sbjct: 325 NVISWTAIIAGYGMHGQ-GELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT-EKGLY 382
Query: 357 ALTIKIEIRSNRISVN--NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
T + + +V + + G LE+AR+L M ++ + G +
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442
Query: 415 IGMEALRL-FEWMLETNIPPTNITFVSVLS 443
+E L FE ++E PTNI + +LS
Sbjct: 443 RNVELAELAFEKVIE--FEPTNIGYYVLLS 470
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 46/381 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
FRQ+ K G S++A+ + L+P C H F +
Sbjct: 147 FRQMRKE---------GVSVNAVTMLGLIPV----------------CAGPIHLGFGTSL 181
Query: 62 HANVFSF---------NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDT 112
HA F N LL Y R + AR+LFD +P+ L+++N +IS YA G
Sbjct: 182 HACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLA 241
Query: 113 ESALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSL 170
L L++ M D TL G++++ ++ +++ GF + N+L
Sbjct: 242 GHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNAL 301
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
+ Y+R G L +A+ +F M E K+ +SW +++ YG H +G A+QLF EM+S D
Sbjct: 302 INMYARCGNLVKARAIFDGMTE-KNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPD 360
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
S+L+A + GL + + + G S ++DL + +G + + K+
Sbjct: 361 GAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGR-AGRLEEARKL 419
Query: 290 FEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
+ +PD +W ++ G + + A F+K+ + + P + + ++ SN+
Sbjct: 420 IGSMSVEPDGAVWGALL-GACKIHRNVELAELAFEKV--IEFEPTNIGYYVLL---SNIF 473
Query: 349 PSLGKQIHALTIKIEIRSNRI 369
G L +++ +R ++
Sbjct: 474 SEAGNMEGILRVRVMMRERKL 494
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 345/651 (52%), Gaps = 47/651 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V++ N L+A YA+ + A ++FD +P D+V++NT++ Y G AL+ F++M
Sbjct: 141 DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMH 200
Query: 124 ---EKRFDTDGFTLSGLITASSNNLCLI------KQLHCLAIYCGFDHYASVNNSLLTCY 174
E + D+ G I A+ CL K++H I G + V SLL Y
Sbjct: 201 DALEVQHDSVG------IIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMY 254
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G + A+ VF M ++ V+WN M+ Y + EA F +M + L +++ T
Sbjct: 255 CKCGEVAYARSVFATM-PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTA 313
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
++L A E + G H ++++ F + + + L+++Y K G + K+F +I
Sbjct: 314 INLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKV-GKVESSEKIFGKIA 372
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGK 353
LV WN MI+ Y KE Y+ +A+ F +L +PD + V+ A L S +
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYT-EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCR 431
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
QIH+ I + N + + NA++ MY++ G++ +R +FD+M + +S N+MI GYA H
Sbjct: 432 QIHSYIIGLGYAENTL-IMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIH 490
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G AL +F+ M + P TFVSVL+AC+ +G V EG +F++M +G P+ EH
Sbjct: 491 GQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEH 550
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y CM DLLGR G L + + IE+MP +P S IA AA QLE
Sbjct: 551 YGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLE 610
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
N Y++L+++YA +G+WE+V +R LM+++G+++ S +E+ F D SH
Sbjct: 611 HDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSH 670
Query: 577 PMIKEIHNYLEEMSRKMK-------QAGYVPDKEKRLV---HHSEKLAVAFGLLSTSYGE 626
+ IH +SRK++ Q+ VP + HS +LAV FGL+S+ G
Sbjct: 671 SQSRTIHEVSNILSRKIEETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGS 730
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PILV KN+RIC CH+A+K IS +GR I V D+ +H F DG C CGDYW
Sbjct: 731 PILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 212/431 (49%), Gaps = 9/431 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ + A + R+ A + + PD +N +I +AD G AL+ ++ M E D
Sbjct: 47 LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106
Query: 131 GFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT ++ A L + H + I G +H NSL+ Y++ G +++A+RVF
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDL 247
M ++D V+WN+MV Y + G AL FQEM +L++ D + + L A
Sbjct: 167 GM-PVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSS 225
Query: 248 VGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISG 307
+ G + H ++I+ G Q+ +G+ L+D+Y KC G++ VF +P +V WN MI G
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKC-GEVAYARSVFATMPLRTVVTWNCMIGG 284
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKIEIRS 366
Y+ E D+A CF ++ G + + + +++AC+ SL G+ +H ++ +
Sbjct: 285 YALNER-PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343
Query: 367 NRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM 426
+ + + AL+ MY K G +E + ++F ++ VS N+MIA Y + EA+ LF +
Sbjct: 344 H-VVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402
Query: 427 LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGK 486
L + P T +V+ A G + ++ S + + G+ + ++ + R+G
Sbjct: 403 LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGL-GYAENTLIMNAVLHMYARSGD 461
Query: 487 LTDAERLIEAM 497
+ + + + M
Sbjct: 462 VVASREIFDKM 472
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 160/341 (46%), Gaps = 34/341 (9%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L C + GK +H +++ + + + +Y KCG ++ A F V
Sbjct: 216 LAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTV 275
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDL-VSYNTLISAYADCGDTESALSLFKDMRE 124
++N ++ YA R A F Q+ L V T I+ A C TES+L
Sbjct: 276 VTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSL-------- 327
Query: 125 KRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAK 184
+ +H + F + + +LL Y + G ++ ++
Sbjct: 328 ----------------------YGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSE 365
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
++F ++ K VSWN+M+ AY EA+ LF E+++ L D +T+++++ AF L
Sbjct: 366 KIFGKIAN-KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLL 424
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L Q H+++I G+ +N+ I + ++ +YA+ SGD+ ++F+++ D++ WNTM
Sbjct: 425 GSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYAR-SGDVVASREIFDKMVSKDVISWNTM 483
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
I GY+ + AL F ++ G P++ +FV V++ACS
Sbjct: 484 IMGYAIHGQ-GKTALEMFDEMKYNGLQPNESTFVSVLTACS 523
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNI 431
+ +LV + G +++A + + N MI G+A G+ AL + MLE
Sbjct: 44 SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103
Query: 432 PPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
P TF V+ CA G + EG+ M+ + G E + + ++ + G + DAE
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKL-GLEHDVYTCNSLVAFYAKLGLVEDAE 162
Query: 492 RLIEAMP 498
R+ + MP
Sbjct: 163 RVFDGMP 169
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 303/563 (53%), Gaps = 70/563 (12%)
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
FL AK +F+ + + +NS++ A + LEAL L+ M+ L D T ++
Sbjct: 115 FLAYAKTIFHHLQNPPPSL-YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVI 173
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAK-------------CSG---- 281
A GL H H++KSGF +S+I S LI LYA CS
Sbjct: 174 KACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVV 233
Query: 282 -------------DMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV 328
+M VF+ + D++ WNTMI+GY+ + ++AL F ++ V
Sbjct: 234 SWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGK-PNEALALFDQMRAV 292
Query: 329 GYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNN----ALVAMYSKCGN 384
G P + + V ++SAC++L +L K +H T I NRI VN+ ALV MY+KCG
Sbjct: 293 GVKPTEATVVSLLSACAHLG-ALDKGLHLHTY---INDNRIEVNSIVGTALVDMYAKCGK 348
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+ A ++F+ M + ++ N++IAG A HG EA +LF+ M E + P +ITFV++LSA
Sbjct: 349 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 408
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSI 504
C+H G V EGQK M +G EP+ EHY C+IDLL RAG L +A LI MP P
Sbjct: 409 CSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPS 468
Query: 505 ALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMR 547
AL A + L+P ++ Y++L+NIYAA+ KW++ +R LM+
Sbjct: 469 ALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMK 528
Query: 548 DRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA-GYVP------ 600
G+ K PG S IE+K +H FVA D SHP +I+ L E+ ++K A GY
Sbjct: 529 VNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVL 588
Query: 601 ------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
DKE L HSEKLA+A+GLL E I ++KNLR+C DCH+ IK IS + GRE
Sbjct: 589 LDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGRE 648
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD RFH F+DG CSC D+W
Sbjct: 649 IIVRDRNRFHHFEDGECSCLDFW 671
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 7/244 (2%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K C G +H +K+ +Y+ + I LY+ L AA FN
Sbjct: 168 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 227
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+V S+N ++ Y + + + AR +FD++ D++S+NT+I+ YA CG AL+LF
Sbjct: 228 SARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFD 287
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNN----SLLTCYSR 176
MR T+ L++A ++ L K LH L Y D+ VN+ +L+ Y++
Sbjct: 288 QMRAVGVKPTEATVVSLLSACAHLGALDKGLH-LHTYIN-DNRIEVNSIVGTALVDMYAK 345
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A +VF M E KD ++WN+++ H EA QLF+EM + + T +
Sbjct: 346 CGKISLATQVFNAM-ESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVA 404
Query: 237 ILTA 240
IL+A
Sbjct: 405 ILSA 408
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ YA+ +I+ A Q+F+ + D++++NT+I+ A G+ + A LFK+M+E + +
Sbjct: 339 LVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPN 398
Query: 131 GFTLSGLITASSNNLCL---IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF 187
T +++A S+ + K L C++ G + ++ +R GFL+EA +
Sbjct: 399 DITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELI 458
Query: 188 YEM 190
M
Sbjct: 459 GTM 461
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 317/563 (56%), Gaps = 37/563 (6%)
Query: 148 IKQLHCLAIYCGFDHYASVNNS--LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
+KQ+H +I G N + S + + A ++F ++ + + +WN+M+
Sbjct: 51 LKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQI-QAPNIFTWNTMIRG 109
Query: 206 YGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
+ + A++LF +M + + D +T + A L D+ G H+ ++++GF
Sbjct: 110 FAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS 169
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKK 324
+ + L+ +Y+ G +VFE + D V WN++I+G++ ++AL +++
Sbjct: 170 LRFVQNSLVHMYS-VFGFAESAYQVFEIMSYRDRVAWNSVINGFALNG-MPNEALTLYRE 227
Query: 325 LNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCG 383
+ G PD + V ++SAC L +LG+++H +K+ + N+ +NAL+ +YSKCG
Sbjct: 228 MGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQ-HASNALLDLYSKCG 286
Query: 384 NLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLS 443
N DA+++FD M E + VS S+I G A +G+G EAL+LF + + P+ ITFV VL
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 444 ACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
AC+H G + EG YF MK+ +G P EH+ CM+DLL RAGK+ DA I MP P +
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNA 406
Query: 504 IALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLM 546
+ + A +LE ++ +V+L+N+YA+ +W +V +R++M
Sbjct: 407 VIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIM 466
Query: 547 RDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------ 600
+GV+K PG+S +E+K +++ F+ D SHP +E + L ++++ +K GYVP
Sbjct: 467 LMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVL 526
Query: 601 ------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGRE 654
+KE L HH+EK+A+AF L++T G PI +MKNLR+C DCH AIK IS + RE
Sbjct: 527 ADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFERE 586
Query: 655 ITVRDTYRFHCFKDGRCSCGDYW 677
I VRD RFH FKDG CSC DYW
Sbjct: 587 IIVRDRSRFHHFKDGSCSCKDYW 609
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 37/309 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF + K D+ G+ +H++ ++N ++ N + +YS
Sbjct: 138 TFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS--------------- 182
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
VF F SA Q+F+ + D V++N++I+ +A G AL+L++
Sbjct: 183 ----VFGF------------AESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + + DGFT+ L++A L L +++H + G +N+LL YS+ G
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A++VF EM E + VSW S++V + G EAL+LF E+ L T +L
Sbjct: 287 NFRDAQKVFDEMEE-RSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVL 345
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A + L G + + + G ++DL + +G + D +P P
Sbjct: 346 YACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCR-AGKVGDAYDYIRNMPVPP 404
Query: 297 DLVLWNTMI 305
+ V+W T++
Sbjct: 405 NAVIWRTLL 413
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 223/704 (31%), Positives = 357/704 (50%), Gaps = 70/704 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R++ GK +H +K + L+N + +YSKCGC++ A F
Sbjct: 649 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 708
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT++ ++ GDT + +
Sbjct: 709 NNKNV-------------------------------VSWNTMVGGFSAEGDTHGTFDVLR 737
Query: 121 DMREKRFDTDGFTLSGL----ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M D ++ L + + L +K+LHC ++ F + V N+ + Y++
Sbjct: 738 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 797
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L A+RVF+ + K SWN+++ + Q + +L +M L D +T+ S
Sbjct: 798 CGSLSYAQRVFHGI-RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 856
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A + L+ L G + H +I++ ++ + ++ LY C G++ +F+ +
Sbjct: 857 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC-GELCTVQALFDAMEDK 915
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
LV WNT+I+GY Q + D+ALG F+++ G S + V ACS L S LG++
Sbjct: 916 SLVSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 974
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA +K + + + +L+ MY+K G++ + ++F+ + E +T S N+MI GY HG+
Sbjct: 975 HAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 1033
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA++LFE M T P ++TF+ VL+AC H+G + EG +Y MK FG +P +HY+
Sbjct: 1034 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 1093
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL------------------KAANHFLQLEP 517
C+ID+LGRAG+L A R++ + + K A +LEP
Sbjct: 1094 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 1153
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
YV+L+N+YA GKWE+V +R+ M + ++K G SWIE+ +++ FV +
Sbjct: 1154 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 1213
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+EI + + K+ + GY PD K ++L HSEKLA+ +GL+ TS G
Sbjct: 1214 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 1273
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
I V KNLRIC DCHNA K IS + REI VRD RFH FK+G
Sbjct: 1274 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 233/507 (45%), Gaps = 47/507 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K C G D+ G ++H L +K G +
Sbjct: 544 TYPCVIKACAGMSDVGIGLAVHGLVVKT-------------------GLVE--------- 575
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+VF N L++ Y + A QLFD +P+ +LVS+N++I ++D G +E + L
Sbjct: 576 ---DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 632
Query: 121 DMREKRFD----TDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+M E+ D D TL + + A + L K +H A+ D +NN+L+ Y
Sbjct: 633 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 692
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQLGLDMY 232
S+ G + A+ +F +M K+ VSWN+MV + + + ++M++ + D
Sbjct: 693 SKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 751
Query: 233 TLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
T+ + + L + H + +K F N + + + YAKC G + +VF
Sbjct: 752 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC-GSLSYAQRVFHG 810
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSL 351
I + WN +I G++Q + +L ++ G PD + ++SACS L S L
Sbjct: 811 IRSKTVNSWNALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 869
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GK++H I+ + + + V +++++Y CG L + LFD M + + VS N++I GY
Sbjct: 870 GKEVHGFIIRNWLERD-LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 928
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPE 470
Q+G AL +F M+ I I+ + V AC+ + G++ + +K + E +
Sbjct: 929 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LEDD 986
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ID+ + G +T + ++ +
Sbjct: 987 AFIACSLIDMYAKNGSITQSSKVFNGL 1013
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 235/517 (45%), Gaps = 73/517 (14%)
Query: 5 VLKTCVGRRDLVTGKSLHALY-----LKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+L+ R+D+ G+ +H L L+N L I +Y+ CG + F+
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRN----DDVLCTRIITMYAMCGSPDDSRFVFDA 500
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+ N+F +N ++++Y+R +L+D++ L ++ +IS T L
Sbjct: 501 LRSKNLFQWNAVISSYSRN-------ELYDEV----LETFIEMIS-------TTDLLP-- 540
Query: 120 KDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
D FT +I A + +++ + +H L + G V N+L++ Y +
Sbjct: 541 ----------DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 590
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ----LGLDMYT 233
GF+ +A ++F M E ++ VSWNSM+ + + E+ L EM+ D+ T
Sbjct: 591 GFVTDALQLFDIMPE-RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 649
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L ++L ++ G H +K + + + L+D+Y+KC G + + +F+
Sbjct: 650 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC-GCITNAQMIFKMN 708
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRV-----GYHPDDCSFVCVISACSNLS 348
++V WNTM+ G+S + + G F L ++ D+ + + + C + S
Sbjct: 709 NNKNVVSWNTMVGGFSAEGDTH----GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 764
Query: 349 --PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
PSL K++H ++K E N + V NA VA Y+KCG+L A+R+F + S N++
Sbjct: 765 FLPSL-KELHCYSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 822
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM----- 461
I G+AQ +L M + + P + T S+LSAC+ + G++ +
Sbjct: 823 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 882
Query: 462 -KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+D+F Y ++ L G+L + L +AM
Sbjct: 883 ERDLF-------VYLSVLSLYIHCGELCTVQALFDAM 912
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 11/269 (4%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEE 292
L +L A +D+ G + H + S +N + + +I +YA C G D VF+
Sbjct: 442 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDA 500
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCF-KKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ +L WN +IS YS+ E Y D+ L F + ++ PD ++ CVI AC+ +S
Sbjct: 501 LRSKNLFQWNAVISSYSRNELY-DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 559
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G +H L +K + + + V NALV+ Y G + DA +LFD MPE N VS NSMI +
Sbjct: 560 IGLAVHGLVVKTGLVED-VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 618
Query: 411 AQHGIGMEALRLFEWMLETN----IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ +G E+ L M+E N P T V+VL CA ++ G+ +
Sbjct: 619 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-R 677
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ E + ++D+ + G +T+A+ + +
Sbjct: 678 LDKELVLNNALMDMYSKCGCITNAQMIFK 706
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G++IH L N + ++ MY+ CG+ +D+R +FD + N N++I+ Y
Sbjct: 457 MGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY 516
Query: 411 AQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+++ + E L F E + T++ P + T+ V+ ACA V G ++ G
Sbjct: 517 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVE 575
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++ G G +TDA +L + MP
Sbjct: 576 DVFVGNALVSFYGTHGFVTDALQLFDIMP 604
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 336/621 (54%), Gaps = 57/621 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL C + G LH L + + + + ++N + +Y+KCG H F+
Sbjct: 250 TFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCG------HLFD-- 301
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR+LFD +P+ DLV++N +IS Y G + A LF
Sbjct: 302 -----------------------ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFH 338
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M R D T S + S L K++HC I G + ++L+ Y +
Sbjct: 339 EMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR 398
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++ A+++F + + D V +M+ Y + AL++F+ ++ ++ + TLAS+L
Sbjct: 399 DVEMARKIFDQRTPV-DIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVL 457
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L L G + H H++K+G + ++GS ++D+YAKC G + + F I D
Sbjct: 458 PACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC-GRLDLAHQTFIGISDKDA 516
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
V WN+MI+ SQ + ++A+ F+++ G D S +SAC+NL P+L GK+IH
Sbjct: 517 VCWNSMITSCSQNGK-PEEAIDLFRQMGMAGTKYDCVSISAALSACANL-PALHYGKEIH 574
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A ++ RS+ + +AL+ MYSKCGNL+ A R+FD M E N VS NS+IA Y HG
Sbjct: 575 AFMMRGAFRSDLFA-ESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 633
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
++L LF ML I P ++TF++++SAC H G+V EG YF M + G EHY+C
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPSN 519
M+DL GRAG+L +A +I +MPF+P G++ L A+ + L+P N
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQN 753
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
+ YV+L+N++A +G+WE V IR LM++RGVQK PG SWI+V H+FVA D SHP
Sbjct: 754 SGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQS 813
Query: 580 KEIHNYLEEMSRKMKQAGYVP 600
+I+ L+ + ++++ GYVP
Sbjct: 814 SQIYLLLKNLFLELRKEGYVP 834
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 240/501 (47%), Gaps = 41/501 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+K C G + G+ +H ++ + I YS+ GC
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC----------- 197
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I AR LFD++P D V +N +++ Y GD ++A +F
Sbjct: 198 --------------------IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFM 237
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+MR + + T + +++ ++ + + QLH L + G + + V N+LL Y++ G
Sbjct: 238 EMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCG 297
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L +A+R+F +M D V+WN M+ Y Q+ EA LF EM+S ++ D T +S L
Sbjct: 298 HLFDARRLF-DMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFL 356
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ L G + H ++I++G + + S LID+Y KC D+ K+F++ D+
Sbjct: 357 PLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR-DVEMARKIFDQRTPVDI 415
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V+ MISGY ++ AL F+ L + + + V+ AC+ L+ +LGK++H
Sbjct: 416 VVCTAMISGYVLN-GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHG 474
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K V +A++ MY+KCG L+ A + F + + + V NSMI +Q+G
Sbjct: 475 HILK-NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPE 533
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSC 476
EA+ LF M ++ + LSACA+ + G++ + MM+ F + E S
Sbjct: 534 EAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE--SA 591
Query: 477 MIDLLGRAGKLTDAERLIEAM 497
+ID+ + G L A R+ + M
Sbjct: 592 LIDMYSKCGNLDLACRVFDTM 612
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 250/554 (45%), Gaps = 63/554 (11%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHAN 64
+L+TC L G+ HA L N + ++ L + +Y CG A + F
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF------- 104
Query: 65 VFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMRE 124
QLR+ + +N +I + G + AL + M
Sbjct: 105 ------------YQLRLWCSE------------PWNWMIRGFTMMGQFDFALLFYFKMLG 140
Query: 125 KRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
D +T +I A N++ L + +H + GF+ V +SL+ YS NG + +
Sbjct: 141 CGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHD 200
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ +F M KD V WN M+ Y ++ + A +F EM + + T A +L+
Sbjct: 201 ARYLFDRMPS-KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 243 SLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWN 302
S + G Q H ++ SG +S + + L+ +YAKC G + D ++F+ +P+ DLV WN
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC-GHLFDARRLFDMMPKTDLVTWN 318
Query: 303 TMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIK 361
MISGY Q + D+A F ++ PD +F + S + GK+IH I+
Sbjct: 319 GMISGYVQN-GFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIR 377
Query: 362 IEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALR 421
+ S + + +AL+ +Y KC ++E AR++FD+ + V +MI+GY +G+ AL
Sbjct: 378 NGV-SLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALE 436
Query: 422 LFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHY--SCMI 478
+F W+L+ + ++T SVL ACA + G++ ++K+ G G Y S ++
Sbjct: 437 IFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHG----GSCYVGSAIM 492
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEE 538
D+ + G+L A + F+ + +AV + + + +GK EE
Sbjct: 493 DMYAKCGRLDLAHQT------------------FIGISDKDAVCWNSMITSCSQNGKPEE 534
Query: 539 VATIRRLMRDRGVQ 552
+ R M G +
Sbjct: 535 AIDLFRQMGMAGTK 548
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
L SIL T L G Q HA ++ +G N +G+ L+ +Y C G D +F ++
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLC-GAFLDAKNIFYQL 107
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLG 352
WN MI G++ ++ D AL + K+ G PD +F VI AC L S +LG
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQF-DFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
Query: 353 KQIHALTIKIEIRSNRIS--VNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+ +H KI+ + V ++L+ YS+ G + DAR LFDRMP + V N M+ GY
Sbjct: 167 RVVHD---KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGY 223
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
++G A +F M T P ++TF VLS CA + G + ++ G E +
Sbjct: 224 VKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS-GLEMD 282
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ + + G L DA RL + MP
Sbjct: 283 SPVANTLLAMYAKCGHLFDARRLFDMMP 310
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/564 (35%), Positives = 307/564 (54%), Gaps = 65/564 (11%)
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
S +D A R+F ++ + + +N+M+ + + +A + + L D T
Sbjct: 64 SGTSLIDYASRIFSQI-QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTF 122
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA----------------- 277
++ + T L + G Q H H+IK GF ++ ++ + L+ +YA
Sbjct: 123 PFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYY 182
Query: 278 --------------KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFK 323
KC GD+ K+F+++P+ +LV W+TMISGY+Q + D+A+ FK
Sbjct: 183 VDVVSWTSMIRGFNKC-GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHF-DKAVELFK 240
Query: 324 KLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKC 382
L G ++ V VIS+C++L LG++ H +K + N I + ALV MY++C
Sbjct: 241 VLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLI-LGTALVDMYARC 299
Query: 383 GNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVL 442
G+++ A +F+ +PE +T+S ++IAG A HG +L+ F M+E + P +ITF +VL
Sbjct: 300 GSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVL 359
Query: 443 SACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG 502
SAC+H G V G + F MK EP EHY CM+DLLGRAGKL +AER + MP P
Sbjct: 360 SACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPN 419
Query: 503 S-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
+ I + +QL P ++ YV+L+NIYA + +WE+V +R++
Sbjct: 420 APVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQM 479
Query: 546 MRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV------ 599
M+ +G++K PG S IE+ ++H F D SHP + +I EE+ +++ AGY
Sbjct: 480 MKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADA 539
Query: 600 ------PDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGR 653
+KE L HSEKLA+AFG++ + G PI ++KNLR+C DCH A K IS + GR
Sbjct: 540 LFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGR 599
Query: 654 EITVRDTYRFHCFKDGRCSCGDYW 677
E+ VRD RFH F+ G CSC DYW
Sbjct: 600 ELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/529 (22%), Positives = 223/529 (42%), Gaps = 94/529 (17%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILL----YSKCGCLSAAHHAFNQTQ 61
L+TC DL K +HA ++ + + ++ I S + A F+Q Q
Sbjct: 24 LETC---SDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 62 HANVFSFNVLLAAY--------ARQLRIASARQ--LFDQIPQPDLVS------------- 98
+ N+F FN ++ + A + S RQ L D + P LV
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQ 140
Query: 99 ----------------YNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
N+L+ YA GDTE+A +F+ M
Sbjct: 141 AHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRM-------------------- 180
Query: 143 NNLCLIKQLHCLAIYCGFDHYASVNN--SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+Y V + S++ +++ G ++ A+++F +M E K+ V+W+
Sbjct: 181 -------------------YYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE-KNLVTWS 220
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Y Q+ +A++LF+ + S + + + S++++ L L G + H +++K+
Sbjct: 221 TMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKN 280
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
G N +G+ L+D+YA+C G + + VFE++P+ D + W +I+G + YS+++L
Sbjct: 281 GMTLNLILGTALVDMYARC-GSIDKAVWVFEDLPERDTLSWTALIAGLAM-HGYSERSLK 338
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F + G P D +F V+SACS+ G QI + R+ +V +
Sbjct: 339 YFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLL 398
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+ G LE+A R +MP + + G + E +L +P + +V
Sbjct: 399 GRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYV 458
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLT 488
+ + A+ + + + MMK +P G +I+L GR K T
Sbjct: 459 LLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGH---SLIELDGRVHKFT 504
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 151/323 (46%), Gaps = 30/323 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF ++K+C + G H +K+ Y+ N + +Y+ G AA F +
Sbjct: 121 TFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRM 180
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S+ ++ + + + SAR+LFDQ+P+ +LV+++T+IS YA + A+ LFK
Sbjct: 181 YYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFK 240
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ + + + +I++ ++ L L ++ H + G + +L+ Y+R G
Sbjct: 241 VLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCG 300
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D+A VF ++ E +D +SW +++ H +L+ F MV L T ++L
Sbjct: 301 SIDKAVWVFEDLPE-RDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVL 359
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMRD 285
+A + H L++ GF + H G ++DL + +G + +
Sbjct: 360 SACS-----------HGGLVERGFQIFESMKRDHRVEPRLEHYGC-MVDLLGR-AGKLEE 406
Query: 286 CMKVFEEIP-QPDLVLWNTMISG 307
+ ++P +P+ +W ++
Sbjct: 407 AERFVLKMPVKPNAPVWGALLGA 429
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 322/576 (55%), Gaps = 28/576 (4%)
Query: 49 CLSAAH----HAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLIS 104
CLS A HA A+ ++ YA+ + AR+ F +P + + N ++
Sbjct: 252 CLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMV 311
Query: 105 AYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDH 162
G AL LF+ M D +LSG+ +A + ++ Q+HCLAI GFD
Sbjct: 312 GLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDV 371
Query: 163 YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM 222
V N++L Y + L EA VF EM E +D VSWN+++ A Q+ + + EM
Sbjct: 372 DVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAYLNEM 430
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ + D +T S+L A L+ L G H IKSG ++ + S ++D+Y KC G
Sbjct: 431 LRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKC-GM 489
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ + K+ + I +LV WN++ISG+S ++ S++A F ++ +G PD ++ V+
Sbjct: 490 ITEAQKLHDRIGGQELVSWNSIISGFSLNKQ-SEEAQKFFSEMLDIGVKPDHFTYATVLD 548
Query: 343 ACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
C+NL+ LGKQIH IK E+ + +++ LV MY+KCGN+ D+ +F++ + + V
Sbjct: 549 TCANLATIELGKQIHGQIIKQEMLGDEY-ISSTLVDMYAKCGNMPDSLLMFEKAQKLDFV 607
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S N+MI GYA HG G EAL +FE M + N+ P + TFV+VL AC+H G + +G +YF +M
Sbjct: 608 SWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLM 667
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-------------- 507
+ EP+ EH++CM+D+LGR+ +A + I +MP ++ K
Sbjct: 668 TSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEV 727
Query: 508 ---AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKK 564
AA++ L+L+P ++ Y++L+N+YA SGKW +V+ RRLMR ++K+PG SWIEV+
Sbjct: 728 AETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQS 787
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP 600
+MH F+A D HP +E++ L + +MK +GY P
Sbjct: 788 EMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEP 823
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 248/503 (49%), Gaps = 20/503 (3%)
Query: 1 TFRQVLKTCVG--RRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFN 58
TF + + C G R L TG++ HA L + + ++SN + +Y++CG + A F+
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
H + S+N +L AYA +A LF +P PD+VS+N L+S Y G ++ L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 119 FKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+M + D TL+ L+ A +L L Q+H +A+ G + ++L+ Y +
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
L++A R F+ MGE ++ VSW + + Q+ + L+LF +M L LG+ AS
Sbjct: 184 CRSLEDALRFFHGMGE-RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+ + ++ L Q HAH IK+ F + +G+ ++D+YAK + + D + F +P
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAK-ADSLVDARRAFFSLPNH 301
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQI 355
+ N M+ G + +AL F+ + R G D S V SAC+ + L G Q+
Sbjct: 302 TVQACNAMMVGLV-RTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQV 360
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H L IK + + V NA++ +Y KC L +A +F M + ++VS N++IA Q+
Sbjct: 361 HCLAIKSGFDVD-VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 419
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACA-----HTGKVAEGQKYFSMMKDMFGFEPE 470
+ + ML + P + T+ SVL ACA G V G+ S G +
Sbjct: 420 YEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKS------GLGLD 473
Query: 471 GEHYSCMIDLLGRAGKLTDAERL 493
S ++D+ + G +T+A++L
Sbjct: 474 AFVSSTVVDMYCKCGMITEAQKL 496
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 172/377 (45%), Gaps = 51/377 (13%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VLK C G + L G +H +K+ + A++S+ + +Y KCG
Sbjct: 441 TYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCG------------ 488
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I A++L D+I +LVS+N++IS ++ +E A F
Sbjct: 489 -------------------MITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFS 529
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M + D FT + ++ +N + L KQ+H I ++++L+ Y++ G
Sbjct: 530 EMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCG 589
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++ +F E + D VSWN+M+ Y H +G EAL++F+ M + + T ++L
Sbjct: 590 NMPDSLLMF-EKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVL 648
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFH---QNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
A + + L G ++ +L+ S + Q H ++D+ + G ++ +K +P
Sbjct: 649 RACSHVGLLDDGCRYF-YLMTSRYKLEPQLEHFAC-MVDILGRSKGP-QEALKFIRSMPL 705
Query: 295 QPDLVLWNTMIS--GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLG 352
+ D V+W T++S Q E ++ A +L+ PDD S ++ SN+ G
Sbjct: 706 EADAVIWKTLLSICKIRQDVEVAETAASNVLRLD-----PDDSSVYILL---SNVYAESG 757
Query: 353 KQIHALTIKIEIRSNRI 369
K + + +R R+
Sbjct: 758 KWVDVSRTRRLMRQGRL 774
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 352 GKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G HA + ++ +R +V+ N ++ Y+ G+ A LF MP+ + VS N++++GY
Sbjct: 53 GGAAHARGV-FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGY 111
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
Q G+ +++ L M + P T +L AC +A G + ++ G E +
Sbjct: 112 CQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKT-GLEMD 170
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAM 497
S ++D+ G+ L DA R M
Sbjct: 171 VRAGSALVDMYGKCRSLEDALRFFHGM 197
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 307/573 (53%), Gaps = 77/573 (13%)
Query: 137 LITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
++ S + + Q+H + G DH+ +N L Y+ G LD + +F G ++
Sbjct: 35 VLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALF---GRTQNP 91
Query: 197 VS--WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
W +++ + + + A QLF M L +L ++LT
Sbjct: 92 SVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSL----VSLTAMLTC-------------- 133
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
YAK G++ +F+ + + D V WN MI GY+Q
Sbjct: 134 ---------------------YAK-HGELDAARVLFDGMEERDGVCWNVMIDGYTQNG-M 170
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
++AL F+++ + P++ + + V+SAC L G+ +H+ I+ N + V
Sbjct: 171 PNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN-VHVGT 229
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV MYSKCG+LEDAR +FD++ + + V+ NSMI GYA HG EAL+LF+ M + P
Sbjct: 230 ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHP 289
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
TNITF+ +LSAC H+G V EG F+ MKD +G EP+ EHY CM++LLGRAG + A L
Sbjct: 290 TNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYEL 349
Query: 494 IEAMPFNP---------------GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKW 536
++ M P G IAL K + +N+ Y++L+NIYAA G W
Sbjct: 350 VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNW 409
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
+ VA +R +M+D GV+K+PG S IEV ++H F+A +HP KEI+ LEE++ +K
Sbjct: 410 DGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSH 469
Query: 597 GYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY P +KE+ L HSEKLA+AFGL++T G I ++KNLR+C DCH
Sbjct: 470 GYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVT 529
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
K IS I GR+I VRD RFH F +G CSCGDYW
Sbjct: 530 KLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 148/328 (45%), Gaps = 43/328 (13%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFIL------LYSKCGCLSAAHHAFNQTQHANVFSFNVLL 72
K++ L + V F L +H IL Y+ G L + F +TQ+ +VF + ++
Sbjct: 41 KTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAII 100
Query: 73 AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK-----RF 127
+A + + SA+QLFD +P+ LVS +++ YA G+ ++A LF M E+
Sbjct: 101 HGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 160
Query: 128 DTDGFTLSGL-------------ITASSNNLCLI---------------KQLHCLAIYCG 159
DG+T +G+ A N + ++ + +H G
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 220
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
V +L+ YS+ G L++A+ VF ++ + KD V+WNSM+V Y H EALQLF
Sbjct: 221 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD-KDVVAWNSMIVGYAMHGFSQEALQLF 279
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAK 278
+ M + L T IL+A + G F+ + G +++L +
Sbjct: 280 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 339
Query: 279 CSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+G + ++ + + +PD VLW T++
Sbjct: 340 -AGHVEQAYELVKNMNIEPDPVLWGTLL 366
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 42/212 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L +G+ +H+ N + F+ ++ + +YSKCG L
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLE--------- 242
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
AR +FD+I D+V++N++I YA G ++ AL LFK
Sbjct: 243 ----------------------DARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 280
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M T G+++A ++ + + I +HY + N L
Sbjct: 281 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL--- 337
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
R G +++A + M D V W +++ A
Sbjct: 338 -GRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 368
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/543 (36%), Positives = 300/543 (55%), Gaps = 45/543 (8%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+VF + L+ Y + AR++FD +P+ + VS+ T+IS YA AL LF+ MR
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 124 EKRFDTDGFTLSGLITASS-----NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + F + +++A + NN KQ+HC+A+ G SV N+L+T Y++ G
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNG---KQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A + F E K+ ++W++M+ Q + +AL+LF M + +T ++
Sbjct: 259 SLDDALQTF-ETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G Q H +L+K GF ++ + L+D+YAKCS + D K F+ + +PD+
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS-SIVDARKGFDYLQEPDI 376
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
VLW +MI GY Q E D AL + ++ G P++ + V+ ACS+L+ GKQIHA
Sbjct: 377 VLWTSMIGGYVQNGENED-ALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHA 435
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
T+K + + +AL MY+KCG L+D +F RMP + +S N+MI+G +Q+G G
Sbjct: 436 RTVKYGF-GLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL LFE M P +TFV++LSAC+H G V G YF MM D FG +P EHY+CM
Sbjct: 495 EALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACM 554
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
+D+L RAGKL +A E+ + G WE
Sbjct: 555 VDILSRAGKLKEAIEFTESATID--------------------------------HGMWE 582
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V +RR+M+ RGV K+PG SWIE+K +HVFV +D HP I +IH L ++S++MK G
Sbjct: 583 DVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEG 642
Query: 598 YVP 600
Y P
Sbjct: 643 YEP 645
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 189/332 (56%), Gaps = 12/332 (3%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA--LQLFQEMV 223
+ NSL+ Y++ L EAK VF E + KD VSWN ++ Y QH + ++LFQ M
Sbjct: 42 IANSLVNLYAKCQRLREAKFVF-ERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMR 100
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
+ + +T A + TA ++L D GG HA IK ++ +GS L+++Y K +G
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCK-AGLT 159
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+ KVF+ +P+ + V W TMISGY+ ++ + +ALG F+ + R ++ F V+SA
Sbjct: 160 PEARKVFDTMPERNSVSWATMISGYAS-QKLAAEALGLFRLMRREEEGENEFVFTSVLSA 218
Query: 344 CSNLSPSL---GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNT 400
+ P L GKQIH + +K + S +SV NALV MY+KCG+L+DA + F+ + N+
Sbjct: 219 LT--LPELVNNGKQIHCIAVKNGLLS-IVSVGNALVTMYAKCGSLDDALQTFETSSDKNS 275
Query: 401 VSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
++ ++MI G AQ G +AL+LF M + I P+ TFV V++AC+ G EG++
Sbjct: 276 ITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDY 335
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAER 492
+ + GFE + + ++D+ + + DA +
Sbjct: 336 LLKL-GFESQIYVMTALVDMYAKCSSIVDARK 366
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 161/349 (46%), Gaps = 36/349 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VL + GK +H + +KN + + N + +Y+KCG L A F +
Sbjct: 211 VFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETS 270
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N ++++ +I+ A GD++ AL LF
Sbjct: 271 SDKNS-------------------------------ITWSAMITGXAQSGDSDKALKLFS 299
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M FT G+I A S+ KQ+H + GF+ V +L+ Y++
Sbjct: 300 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ +A++ F + E D V W SM+ Y Q+ E +AL L+ M + + T+AS+L
Sbjct: 360 SIVDARKGFDYLQE-PDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVL 418
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A +SL L G Q HA +K GF IGS L +YAKC G ++D VF +P D+
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC-GCLKDGTLVFRRMPARDV 477
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+ WN MISG SQ +AL F+++ G PD +FV ++SACS++
Sbjct: 478 ISWNAMISGLSQN-GCGKEALELFEEMQLEGTKPDYVTFVNILSACSHM 525
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 140/334 (41%), Gaps = 62/334 (18%)
Query: 337 FVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
F ++ N S GK +HA IK S+ + + N+LV +Y+KC L +A+ +F+R+
Sbjct: 10 FTALLQYTHNRSLQKGKALHAQIIKSS--SSCVYIANSLVNLYAKCQRLREAKFVFERIQ 67
Query: 397 EHNTVSLNSMIAGYAQHGIGMEA--LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG 454
+ VS N +I GY+QHG + + LF+ M N P TF V +A + A G
Sbjct: 68 NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGG 127
Query: 455 QKYFSMM------KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
+ ++ +D+F S ++++ +AG +A ++ + MP
Sbjct: 128 RLAHAVAIKMDSCRDVF-------VGSSLMNMYCKAGLTPEARKVFDTMP---------- 170
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV------ 562
N+V + + + YA+ E + RLMR R + + F + V
Sbjct: 171 --------ERNSVSWATMISGYASQKLAAEALGLFRLMR-REEEGENEFVFTSVLSALTL 221
Query: 563 ------KKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVA 616
KQ+H ++G ++ + N L M K G + D + S+K ++
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVS-VGNALVTMYAK---CGSLDDALQTFETSSDKNSIT 277
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
+ + T + GD A+K S++
Sbjct: 278 WSAMITGXAQS----------GDSDKALKLFSSM 301
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VLK C L GK +HA +K + + +Y+KCGCL F +
Sbjct: 413 TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
+V S+N +++ ++ A +LF+++ +PD V++ ++SA + G E
Sbjct: 473 PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGW 532
Query: 117 SLFKDM 122
F+ M
Sbjct: 533 GYFRMM 538
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 221/664 (33%), Positives = 339/664 (51%), Gaps = 74/664 (11%)
Query: 84 ARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
A +F IP P + + +N + + + + + ++ +R D F+ ++ A S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 143 NNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
L + +LH +A V + Y+ G ++ A+ VF EM +D V+WN
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-RDVVTWN 181
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ Y + EA +LF+EM + D L +I++A ++ + LI++
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 261 GFHQNSHI---------GSGLIDL----------------------YAKCSGDMRDCMKV 289
++H+ G+G +D+ Y+KC G + D +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC-GRLDDAQVI 300
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
F++ + DLV W TMIS Y + + Y +AL F+++ G PD S VISAC+NL
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESD-YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 350 -SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIA 408
K +H+ I + + +S+NNAL+ MY+KCG L+ R +F++MP N VS +SMI
Sbjct: 360 LDKAKWVHS-CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
+ HG +AL LF M + N+ P +TFV VL C+H+G V EG+K F+ M D +
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANH 511
P+ EHY CM+DL GRA L +A +IE+MP G + L AA
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 538
Query: 512 FLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVA 571
L+LEP + V+++NIYA +WE+V IRR+M ++ V K+ G S I+ + H F+
Sbjct: 539 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLI 598
Query: 572 EDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGL 619
D H EI+ L+E+ K+K AGYVPD K+ ++ HSEKLA+ FGL
Sbjct: 599 GDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGL 658
Query: 620 LSTSYGEP------ILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
++ E I ++KNLR+C DCH K +S + REI VRD RFHC+K+G CSC
Sbjct: 659 MNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSC 718
Query: 674 GDYW 677
DYW
Sbjct: 719 RDYW 722
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 153/309 (49%), Gaps = 8/309 (2%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++ C ++ ++++ ++N V +L + +Y+ GC+ A F +
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+F +++ Y++ R+ A+ +FDQ + DLV + T+ISAY + + AL +F++M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 124 EKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
D ++ +I+A +N L K +H G + S+NN+L+ Y++ G LD
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
+ VF +M ++ VSW+SM+ A H E +AL LF M + + T +L
Sbjct: 397 ATRDVFEKMPR-RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 242 TSLEDLVGGLQFHAHLIK--SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
+ + G + A + + + H G ++DL+ + + +R+ ++V E +P ++
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGC-MVDLFGR-ANLLREALEVIESMPVASNV 513
Query: 299 VLWNTMISG 307
V+W +++S
Sbjct: 514 VIWGSLMSA 522
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/703 (31%), Positives = 362/703 (51%), Gaps = 68/703 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ +C+ DL + +HA + + L + +Y KCG
Sbjct: 430 TFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCG------------ 477
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SA +F+ + + +V++N+++SA+A G E +L L++
Sbjct: 478 -------------------SVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYE 518
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M + D T ++ A + + + A + + N+ ++ Y+R G L
Sbjct: 519 RMLLEGTKPDKITYLAVLDACQS----VSEARRYAATFELELDIAARNAAVSAYARCGSL 574
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EAK F + + V+WN+M+ QH E +AL+ F +M + + T + L A
Sbjct: 575 KEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEA 634
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+SL+DL G Q HA ++ H+ +++ + +I++Y KC G + + M F ++P+ D++
Sbjct: 635 CSSLKDLTRGRQLHARILLENIHE-ANLSNAVINMYGKC-GSLDEAMDEFVKMPERDVIS 692
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WNTMI+ Y+Q QAL FK+++ G+ PD +++ I AC ++ S +LGK IH++
Sbjct: 693 WNTMIATYAQHGS-GRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIV 751
Query: 360 -IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
V ALV MY++CG+L DA+ +F R N V+ +++IA AQHG E
Sbjct: 752 ATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENE 811
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCM 477
AL LF M P +TF ++++AC+ G V +G ++ F + ++ EHY CM
Sbjct: 812 ALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCM 871
Query: 478 IDLLGRAGKLTDAERLIEAMPFNP-GSI----------------ALKAANHFLQLEP-SN 519
+++LGRAGKL +AE LI+ MP G+I ++AAN QL+P S
Sbjct: 872 VEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQLDPGSF 931
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPG-FSWIEVKKQMHVFVAEDG--SH 576
A MLA +Y A+G+WE+ A +R+ + R +++PG SWIEV ++H F +D
Sbjct: 932 AASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRVHEFGEDDDRLQG 991
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH-----HSEKLAVAFGLLSTSYGEPILVM 631
P + +I L+ +S + G + E H HSEK+A+ FG++ST G+ I ++
Sbjct: 992 PRLDKIRGELQRLSSLAVEEGGICKDENARAHILGCCHSEKVAIGFGIVSTPAGQLIRIV 1051
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF-KDGRCSC 673
KNLR C DCH KF+S REI+VRD Y HCF +G CSC
Sbjct: 1052 KNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFHTNGSCSC 1094
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 239/503 (47%), Gaps = 53/503 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +L+ C ++ GK +H L + + YL NH I +Y+KCGCL
Sbjct: 29 YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQ---------- 78
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A ++F+ +P P++ S+ LI+AYA G L F+
Sbjct: 79 ---------------------DAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRK 117
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D F S ++TA S+ L K +H + G + V N+++ Y + G
Sbjct: 118 MQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGR 176
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASIL 238
+ EAK VF + E ++ VSWN+++ A Q+ +A+Q+FQ M + + + T S++
Sbjct: 177 VHEAKAVFERLPE-RNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVV 235
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A ++L DL G H +I++GF +G+ L+++Y KC G + VFE++ D+
Sbjct: 236 DACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKC-GSVDHARLVFEKMRLRDV 294
Query: 299 V---LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS--PSLGK 353
+ W +I+ ++ +A F K++ G P+ +FV V+ AC+ L+ +
Sbjct: 295 LSVYSWTVIIAAFAHNGHLL-EAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFA 353
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHNTVSLNSMIAGYAQ 412
++ L ++++ ++ A V+ ++K G+L AR +F+ + N VS MI YAQ
Sbjct: 354 RVKHLGLELD-----TTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQ 408
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G A L++ M + P +TF++V+ +C + ++ + M GFE +
Sbjct: 409 QGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMV-ASGFESDVV 464
Query: 473 HYSCMIDLLGRAGKLTDAERLIE 495
C++ + G+ G + A + E
Sbjct: 465 LQVCLVTMYGKCGSVDSAWSIFE 487
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 232/488 (47%), Gaps = 30/488 (6%)
Query: 18 GKSLHALYLKNLVPFSAYLSNH--FILLYSKCGCLSAAHHAFNQTQHANVFSFNVL---- 71
G L A L + L N F+ + C L+ F + +H + L
Sbjct: 311 GHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARVKHLGLELDTTLGTAF 370
Query: 72 LAAYARQLRIASARQLFDQIPQP-DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
++ +A+ +A+AR +F+ + ++VS+ +I AYA G +A L+K M + +
Sbjct: 371 VSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD---CEPN 427
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T ++ + +L +Q+H + GF+ + L+T Y + G +D A +F
Sbjct: 428 AVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFE 487
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E + V+WNSM+ A+ + +L+L++ M+ D T ++L A S+ +
Sbjct: 488 NLKE-RSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSE-- 544
Query: 249 GGLQFHAHLIKSGFHQNSHIGS--GLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
A + F I + + YA+C G +++ F+ I + + V WN MI
Sbjct: 545 ------ARRYAATFELELDIAARNAAVSAYARC-GSLKEAKAAFDAIQWKNNAVTWNAMI 597
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG +Q E S QAL CF K+ G + +++ + ACS+L + G+Q+HA + I
Sbjct: 598 SGLAQHGE-SKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENI 656
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+S NA++ MY KCG+L++A F +MPE + +S N+MIA YAQHG G +AL F+
Sbjct: 657 HEANLS--NAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFK 714
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG-FEPEGEHYSCMIDLLGR 483
M P T++ + AC +A G+ S++ E + + ++ + R
Sbjct: 715 QMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYAR 774
Query: 484 AGKLTDAE 491
G L DA+
Sbjct: 775 CGSLHDAK 782
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 235/499 (47%), Gaps = 43/499 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF V+ C DL GKS H ++ ++ N + +Y KCG + A F +
Sbjct: 230 TFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKM 289
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V S + S+ +I+A+A G A LF
Sbjct: 290 RLRDVLS----------------------------VYSWTVIIAAFAHNGHLLEAFVLFY 321
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
M + + T ++ A + L +++ + G + ++ + ++ +++ G L
Sbjct: 322 KMDLEGVLPNKVTFVTVLRACT-TLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDL 380
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ VF +G ++ VSW M+ AY Q A L++ M + T +++ +
Sbjct: 381 AAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDS 437
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
EDL Q HAH++ SGF + + L+ +Y KC G + +FE + + +V
Sbjct: 438 CLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKC-GSVDSAWSIFENLKERSVVA 496
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTI 360
WN+M+S ++ Y +++L ++++ G PD +++ V+ AC ++S + + +A T
Sbjct: 497 WNSMLSAFASNGCY-ERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEA---RRYAATF 552
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEA 419
++E+ I+ NA V+ Y++CG+L++A+ FD + ++N V+ N+MI+G AQHG +A
Sbjct: 553 ELEL---DIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQA 609
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
L F M + ++T+++ L AC+ + G++ + + + E + +I+
Sbjct: 610 LECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARI--LLENIHEANLSNAVIN 667
Query: 480 LLGRAGKLTDAERLIEAMP 498
+ G+ G L +A MP
Sbjct: 668 MYGKCGSLDEAMDEFVKMP 686
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 149/265 (56%), Gaps = 7/265 (2%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
AS+L + G H H++ SG N ++ + LI +YAKC G ++D ++VFE +P
Sbjct: 30 ASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKC-GCLQDAVEVFELLP 88
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
P++ W +I+ Y+ KE + + LG F+K+ G PD F V++ACS+ + GK
Sbjct: 89 CPNVFSWTALITAYA-KEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGK 147
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
IH + + + V NA+V +Y KCG + +A+ +F+R+PE N VS N++IA AQ+
Sbjct: 148 AIHDCVVLAGMETQ--VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQN 205
Query: 414 GIGMEALRLFEWM-LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
G +A+++F+ M L+ ++ P + TFVSV+ AC++ + G+ + GF+
Sbjct: 206 GHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRT-GFDSYLF 264
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAM 497
+ ++++ G+ G + A + E M
Sbjct: 265 VGNSLVNMYGKCGSVDHARLVFEKM 289
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 348 SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
S + GK +H + NR + N L+ MY+KCG L+DA +F+ +P N S ++I
Sbjct: 41 SAAAGKLVHQHILSSGCGVNRY-LQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALI 99
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
YA+ G E L F M P F +VL+AC+ G + EG+ + + G
Sbjct: 100 TAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVV-LAGM 158
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
E + + +++L G+ G++ +A+ + E +P
Sbjct: 159 ETQVVG-NAIVNLYGKCGRVHEAKAVFERLP 188
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 317/568 (55%), Gaps = 35/568 (6%)
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+S +L +QLH + G + L+ Y+ G + A+R+F M + ++ WN
Sbjct: 74 ASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK-RNVFLWN 132
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
++ AY + A+QL++ MV + D +T L A +L DL G + H ++ +
Sbjct: 133 VLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGT 192
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
+ ++ + +GL+D+YAKC G + D VF+ I D V+WN+MI+ Y Q +AL
Sbjct: 193 HWGEDMFVCAGLVDMYAKC-GCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR-PMEALS 250
Query: 321 CFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
+ + G P + V ISA ++ + G+++H + + + +LV MY
Sbjct: 251 LCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGF-DRQDKLKTSLVDMY 309
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWM-LETNIPPTNITF 438
+K G ++ AR LF+++ + VS N+MI GY HG EAL+LF M +E + P NITF
Sbjct: 310 AKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITF 369
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
V VLSAC H G V E +++F +M D++ +P +H++C++D+LG AG+ +A LI+ MP
Sbjct: 370 VGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMP 429
Query: 499 FNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
P S + A ++LEP +A YV+L+NIYA SGKWE+ A
Sbjct: 430 MQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAAR 489
Query: 542 IRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP- 600
+R+LM +RG++K G SWIE+K + H F+ D SHP EI+ LE + M AGY+P
Sbjct: 490 VRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPD 549
Query: 601 ---------DKEKR--LVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 649
D EKR + HSE+LA+AFGL+ST G +LV KNLR+C DCH IK IS
Sbjct: 550 TMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQ 609
Query: 650 IAGREITVRDTYRFHCFKDGRCSCGDYW 677
I REI +RD R+H F +G CSC DYW
Sbjct: 610 IVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 140/266 (52%), Gaps = 9/266 (3%)
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L + + L G Q H L+ SG ++ + + L+DLYA C G + ++F+ +P
Sbjct: 66 TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAAC-GLVGHARRLFDGMP 124
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF-VCVISACSNLSPSLGK 353
+ ++ LWN +I Y++ + + A+ ++ + G PD+ ++ + + + + L G+
Sbjct: 125 KRNVFLWNVLIRAYARDGPH-EVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
++H + + + V LV MY+KCG ++DAR +FDR+ ++V NSMIA Y Q+
Sbjct: 184 EVHERVLGTHWGED-MFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQN 242
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEG 471
G MEAL L M + PT T VS +SA A + G++ F + GF+ +
Sbjct: 243 GRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRR---GFDRQD 299
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + ++D+ ++G + A L E +
Sbjct: 300 KLKTSLVDMYAKSGWVQVARVLFEQL 325
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 46/300 (15%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
TG+ +H L ++ + +Y+KCGC
Sbjct: 181 TGREVHERVLGTHWGEDMFVCAGLVDMYAKCGC--------------------------- 213
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
+ AR +FD+I D V +N++I+AY G ALSL +DM TL
Sbjct: 214 ----VDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVS 269
Query: 137 LITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
I+A+++ L ++LH GFD + SL+ Y+++G++ A RV +E +
Sbjct: 270 TISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVA-RVLFEQLMKR 328
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTA-----FTSLEDLV 248
+ VSWN+M+ YG H EAL+LF +M V Q+ D T +L+A
Sbjct: 329 ELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEF 388
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
GL + IK + L+D+ +G + + + +P QPD +W +++G
Sbjct: 389 FGLMVDVYSIKPTVQHF----TCLVDVLGH-AGRFEEAYDLIKGMPMQPDSGIWGALLNG 443
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 331/573 (57%), Gaps = 37/573 (6%)
Query: 137 LITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
L+ +S+ IK QLH + G V N+L+ YS++ +++R F E K
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF-EDSPQK 79
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
+W+S++ + Q+ +L+ ++M++ L D + L S + L G H
Sbjct: 80 SSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH 139
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
+K+G+ + +GS L+D+YAKC G++ K+F+E+PQ ++V W+ M+ GY+Q E
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKC-GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE- 197
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+++AL FK+ +D SF VIS C+N + LG+QIH L+IK S+ V +
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSS-SFVGS 256
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
+LV++YSKCG E A ++F+ +P N N+M+ YAQH + + LF+ M + + P
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP 316
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
ITF++VL+AC+H G V EG+ YF MK+ EP +HY+ ++D+LGRAG+L +A +
Sbjct: 317 NFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 494 IEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKW 536
I MP +P +A AA+ +L P ++ ++ L+N YAA G++
Sbjct: 376 ITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
E+ A R+L+RDRG +K+ G SW+E + ++H F A + H KEI+ L E+ +M++A
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKA 495
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY+ D K + + +HSE+LA+AFGL++ PI VMKNLR+CGDCHNAI
Sbjct: 496 GYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAI 555
Query: 645 KFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KF+S R I VRD RFH F+DG+CSC DYW
Sbjct: 556 KFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 121/224 (54%), Gaps = 4/224 (1%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+ +L + + GLQ H +++KSG + + LI+ Y+K D + FE+
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPF-DSRRAFEDS 76
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
PQ W+++IS ++Q E +L KK+ PDD +C+ LS +G
Sbjct: 77 PQKSSTTWSSIISCFAQN-ELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG 135
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ +H L++K ++ + V ++LV MY+KCG + AR++FD MP+ N V+ + M+ GYAQ
Sbjct: 136 RSVHCLSMKTGYDAD-VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
G EAL LF+ L N+ + +F SV+S CA++ + G++
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ 238
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 144/268 (53%), Gaps = 6/268 (2%)
Query: 43 LYSKCGCLSAAHHAFNQTQH-ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNT 101
+ S+C + H +T + A+VF + L+ YA+ I AR++FD++PQ ++V+++
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSG 187
Query: 102 LISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCG 159
++ YA G+ E AL LFK+ + + ++ S +I+ +N+ L L +Q+H L+I
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS 247
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
FD + V +SL++ YS+ G + A +VF E+ +K+ WN+M+ AY QH + ++LF
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEV-PVKNLGIWNAMLKAYAQHSHTQKVIELF 306
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+ M + + T ++L A + + G + + +S + L+D+ +
Sbjct: 307 KRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGR- 365
Query: 280 SGDMRDCMKVFEEIP-QPDLVLWNTMIS 306
+G +++ ++V +P P +W +++
Sbjct: 366 AGRLQEALEVITNMPIDPTESVWGALLT 393
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 39/215 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F V+ C L G+ +H L +K+ S+++ + + LYSKCG A+ FN+
Sbjct: 219 SFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEV 278
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
N+ +N +L AYA+ +LF ++ +P+ +++ +++A + G +
Sbjct: 279 PVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGR 338
Query: 117 SLFKDMREKRFD-TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
F M+E R + TD HYA SL+
Sbjct: 339 YYFDQMKESRIEPTD------------------------------KHYA----SLVDMLG 364
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
R G L EA V M E W +++ + H+
Sbjct: 365 RAGRLQEALEVITNMPIDPTESVWGALLTSCTVHK 399
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 307/543 (56%), Gaps = 35/543 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VS 224
+ + L++CY G +A+++F EM KD +SWNS+V + + + L++F M
Sbjct: 88 IGDQLVSCYLNMGSTPDAQKLFDEMPH-KDSISWNSLVSGFSRIGDLGNCLRVFYTMRYE 146
Query: 225 LQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
+ + TL S+++A + G H +K G + + I++Y K G +
Sbjct: 147 MAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGK-FGCVD 205
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
K+F +P+ ++V WN+M++ ++Q ++A+ F + G PD+ + + ++ AC
Sbjct: 206 SAFKLFWALPEQNMVSWNSMLAVWTQNG-IPNEAVNYFNMMRVNGLFPDEATILSLLQAC 264
Query: 345 SNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
L L + IH + + N I++ L+ +YSK G L + ++F + + + V+L
Sbjct: 265 EKLPLGRLVEAIHGVIFTCGLNEN-ITIATTLLNLYSKLGRLNVSHKVFAEISKPDKVAL 323
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
+M+AGYA HG G EA+ F+W + + P ++TF +LSAC+H+G V +G+ YF +M D
Sbjct: 324 TAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHSGLVMDGKYYFQIMSD 383
Query: 464 MFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IAL 506
+ +P+ +HYSCM+DLLGR G L DA RLI++MP P S +
Sbjct: 384 FYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGACRVYRNINLGK 443
Query: 507 KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQM 566
+AA + + L PS+ Y+ML+NIY+A+G W + + +R LM+ + + G S+IE ++
Sbjct: 444 EAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVFIRNAGCSFIEHGNKI 503
Query: 567 HVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRL------------VHHSEKLA 614
H FV +D SHP +IH LEE+ RK+K+ G+V + E L HSEK+A
Sbjct: 504 HRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVDEEVKTDMINKHSEKIA 563
Query: 615 VAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCG 674
+AFGLL ++ P++++KNLRIC DCHN KF+S I R I +RD+ RFH F DG CSC
Sbjct: 564 LAFGLLVSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIIIRDSKRFHHFSDGLCSCA 623
Query: 675 DYW 677
DYW
Sbjct: 624 DYW 626
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 183/366 (50%), Gaps = 29/366 (7%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR-EKRFDT 129
L++ Y A++LFD++P D +S+N+L+S ++ GD + L +F MR E F+
Sbjct: 92 LVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRIGDLGNCLRVFYTMRYEMAFEW 151
Query: 130 DGFTLSGLITASS------NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+ TL +I+A + C LHC A+ G + V N+ + Y + G +D A
Sbjct: 152 NELTLLSVISACAFAKARDEGWC----LHCCAVKLGMELEVKVVNAFINMYGKFGCVDSA 207
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
++F+ + E ++ VSWNSM+ + Q+ EA+ F M L D T+ S+L A
Sbjct: 208 FKLFWALPE-QNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVNGLFPDEATILSLLQACEK 266
Query: 244 LEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
L +G L H + G ++N I + L++LY+K G + KVF EI +PD V
Sbjct: 267 LP--LGRLVEAIHGVIFTCGLNENITIATTLLNLYSKL-GRLNVSHKVFAEISKPDKVAL 323
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GK---QIHA 357
M++GY+ + +A+ FK R G PD +F ++SACS+ + GK QI +
Sbjct: 324 TAMLAGYAM-HGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHSGLVMDGKYYFQIMS 382
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAG---YAQH 413
+++ + + S +V + +CG L DA RL MP E N+ +++ Y
Sbjct: 383 DFYRVQPQLDHYS---CMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGACRVYRNI 439
Query: 414 GIGMEA 419
+G EA
Sbjct: 440 NLGKEA 445
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 139/339 (41%), Gaps = 42/339 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ C + G LH +K + + N FI +Y K GC+ +A F
Sbjct: 155 TLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFKLFWAL 214
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+ S+N +LA + + G A++ F
Sbjct: 215 PEQNMVSWNSMLAVWTQN-------------------------------GIPNEAVNYFN 243
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR D T+ L+ A L++ +H + CG + ++ +LL YS+ G
Sbjct: 244 MMRVNGLFPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLG 303
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ + +VF E+ + D+V+ +M+ Y H G EA++ F+ V + D T +L
Sbjct: 304 RLNVSHKVFAEISK-PDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLL 362
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
+A S LV +++ ++ + + S ++DL +C G + D ++ + +P +
Sbjct: 363 SA-CSHSGLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRC-GMLNDAYRLIKSMPLE 420
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
P+ +W ++ Y + LG N + +P D
Sbjct: 421 PNSGVWGALLGAC---RVYRNINLGKEAAENLIALNPSD 456
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,397,023,600
Number of Sequences: 23463169
Number of extensions: 423901259
Number of successful extensions: 1202187
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7628
Number of HSP's successfully gapped in prelim test: 3850
Number of HSP's that attempted gapping in prelim test: 973905
Number of HSP's gapped (non-prelim): 69203
length of query: 677
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 527
effective length of database: 8,839,720,017
effective search space: 4658532448959
effective search space used: 4658532448959
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)