BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037537
(677 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/712 (61%), Positives = 536/712 (75%), Gaps = 35/712 (4%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TFR +L V RDL TGKSLHALY+K++V S YLSNHF+ LYSKCG LS A AF T
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NVFS+NV++ AYA+ +I ARQLFD+IPQPD VSYNTLIS YAD +T +A+ LFK
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
MR+ F+ DGFTLSGLI A + + LIKQLHC ++ GFD Y+SVNN+ +T YS+ G L
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
EA VFY M E++DEVSWNSM+VAYGQH+EG +AL L++EM+ +DM+TLAS+L A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG--DMRDCMKVFEEIPQPDL 298
TSL+ L+GG QFH LIK+GFHQNSH+GSGLID Y+KC G M D KVF+EI PDL
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHA 357
V+WNTMISGYS EE S++A+ F+++ R+G+ PDDCSFVCV SACSNL SPS KQIH
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L IK I SNRISVNNAL+++Y K GNL+DAR +FDRMPE N VS N MI GYAQHG G
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L++ ML++ I P ITFV+VLSACAH GKV EGQ+YF+ MK+ F EPE EHYSCM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPSNA 520
IDLLGRAGKL +AER I+AMP+ PGS+A +AAN + ++P A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
PYVMLAN+YA + KWEE+A++R+ MR + ++KKPG SWIEVKK+ HVFVAED SHPMI+
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 581 EIHNYLEEMSRKMKQAGYVPDKE---------------KRLVHHSEKLAVAFGLLSTSYG 625
E++ YLEEM +KMK+ GYV DK+ RL HHSEKLAVAFGL+ST G
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDG 669
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
E ++V+KNLRICGDCHNAIKF+SA+AGREI VRD RFHCFKDG+CSCGDYW
Sbjct: 670 EELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 288/759 (37%), Positives = 408/759 (53%), Gaps = 102/759 (13%)
Query: 17 TGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYA 76
T + +H +K+ + FS YL N+ + +YSK G A F++ FS+N +L+AY+
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 77 RQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSG 136
++ + S + FDQ+PQ D VS+ T+I Y + G A+ + DM ++ + FTL+
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 137 LITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR------------------ 176
++ + + C+ K++H + G SV+NSLL Y++
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 177 -------------NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
G +D A F +M E +D V+WNSM+ + Q L AL +F +M+
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 224 SLQL-GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG- 281
L D +TLAS+L+A +LE L G Q H+H++ +GF + + + LI +Y++C G
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 282 -------------------------------DMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
DM +F + D+V W MI GY Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIKI-EIRSNR 368
Y +A+ F+ + G P+ + ++S S+L+ GKQIH +K EI S
Sbjct: 391 HGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-- 447
Query: 369 ISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+SV+NAL+ MY+K GN+ A R FD + E +TVS SMI AQHG EAL LFE ML
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+ P +IT+V V SAC H G V +G++YF MMKD+ P HY+CM+DL GRAG L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
+A+ IE MP P + AA L LEP N+ Y LAN+Y
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLY 627
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
+A GKWEE A IR+ M+D V+K+ GFSWIEVK ++HVF EDG+HP EI+ ++++
Sbjct: 628 SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIW 687
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++K+ GYVPD KE+ L HHSEKLA+AFGL+ST + +MKNLR+C
Sbjct: 688 DEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCN 747
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH AIKFIS + GREI VRDT RFH FKDG CSC DYW
Sbjct: 748 DCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 197/452 (43%), Gaps = 110/452 (24%)
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM----------- 190
SN + +HC I G + N+L+ YS+ G+ A+++F EM
Sbjct: 27 SNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTV 86
Query: 191 -------GEI------------KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM 231
G++ +D VSW +M+V Y + +A+++ +MV +
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS----------- 280
+TL ++L + + + G + H+ ++K G N + + L+++YAKC
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 281 -------------------GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
G M M FE++ + D+V WN+MISG++Q+ Y +AL
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR-GYDLRALDI 265
Query: 322 FKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMY 379
F K+ R PD + V+SAC+NL +GKQIH+ + + I V NAL++MY
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMY 324
Query: 380 SKCGNLEDARRLFDR---------------------------------MPEHNTVSLNSM 406
S+CG +E ARRL ++ + + + V+ +M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYFSMMKDMF 465
I GY QHG EA+ LF M+ P + T ++LS + ++ G Q + S +K
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK--- 441
Query: 466 GFEPEGEHYS-----CMIDLLGRAGKLTDAER 492
GE YS +I + +AG +T A R
Sbjct: 442 ----SGEIYSVSVSNALITMYAKAGNITSASR 469
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 176/376 (46%), Gaps = 15/376 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ- 59
T VL C L GK +H+ + S + N I +YS+CG + A Q
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 60 -TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
T+ + F LL Y + + A+ +F + D+V++ +I Y G A++L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F+ M + +TL+ +++ +S+ L KQ+H A+ G + SV+N+L+T Y++
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + A R F + +D VSW SM++A QH EAL+LF+ M+ L D T
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 237 ILTAFTSLEDLVGGLQFHAHL--IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
+ +A T + G Q+ + + SH ++DL+ + +G +++ + E++P
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC-MVDLFGR-AGLLQEAQEFIEKMP 578
Query: 295 -QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGK 353
+PD+V W +++S + + LG + P++ SA +NL + GK
Sbjct: 579 IEPDVVTWGSLLSAC---RVHKNIDLGKVAAERLLLLEPENSG---AYSALANLYSACGK 632
Query: 354 QIHALTIKIEIRSNRI 369
A I+ ++ R+
Sbjct: 633 WEEAAKIRKSMKDGRV 648
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/737 (35%), Positives = 400/737 (54%), Gaps = 68/737 (9%)
Query: 6 LKTCVG---RRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+K C+G R K +H ++ L +L N+ + Y+ + A F++
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+FS+N LL AY++ I+ F+++P D V++N LI Y+ G +A+ + M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 123 -REKRFDTDGFTLSGLITASSNN--LCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
R+ + TL ++ SS+N + L KQ+H I GF+ Y V + LL Y+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 180 LDEAKRVFYEM-----------------------------GEIKDEVSWNSMVVAYGQHR 210
+ +AK+VFY + G KD VSW +M+ Q+
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
EA++ F+EM L +D Y S+L A L + G Q HA +I++ F + ++GS
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
LID+Y KC + VF+ + Q ++V W M+ GY Q +++A+ F + R G
Sbjct: 310 ALIDMYCKCKC-LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR-AEEAVKIFLDMQRSGI 367
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
PD + ISAC+N+S G Q H I + + ++V+N+LV +Y KCG+++D+
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDST 426
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
RLF+ M + VS +M++ YAQ G +E ++LF+ M++ + P +T V+SAC+ G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-- 507
V +GQ+YF +M +G P HYSCMIDL R+G+L +A R I MPF P +I
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 508 ---------------AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
AA ++L+P + Y +L++IYA+ GKW+ VA +RR MR++ V+
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD----------- 601
K+PG SWI+ K ++H F A+D S P + +I+ LEE++ K+ GY PD
Sbjct: 607 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEA 666
Query: 602 -KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
K K L +HSE+LA+AFGL+ G+PI V KNLR+C DCHNA K IS++ GREI VRD
Sbjct: 667 VKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDA 726
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FKDG CSCGD+W
Sbjct: 727 VRFHRFKDGTCSCGDFW 743
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 149/315 (47%), Gaps = 39/315 (12%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C G + GK +HA ++ Y+ + I +Y KC CL A F++ +
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
NV S+ ++ Y + G E A+ +F D
Sbjct: 333 QKNVVSWTAMVVGYGQ-------------------------------TGRAEEAVKIFLD 361
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M+ D D +TL I+A +N L + Q H AI G HY +V+NSL+T Y + G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+D++ R+F EM ++D VSW +MV AY Q +E +QLF +MV L D TL +++
Sbjct: 422 IDDSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
A S LV Q + L+ S + IG S +IDL+++ SG + + M+ +P P
Sbjct: 481 A-CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR-SGRLEEAMRFINGMPFPP 538
Query: 297 DLVLWNTMISGYSQK 311
D + W T++S K
Sbjct: 539 DAIGWTTLLSACRNK 553
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 133/349 (38%), Gaps = 73/349 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T Q + C L G H + + + +SN + LY KCG + + FN+
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESAL 116
+ S+ +++AYA+ R QLFD++ Q PD V+ +ISA + G E
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK M + G++ + + C+I +SR
Sbjct: 493 RYFKLMTSEY---------GIVPSIGHYSCMID-----------------------LFSR 520
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+G L+EA R M D + W +++ A +++ LE + E + + LD + A
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSAC-RNKGNLEIGKWAAESL---IELDPHHPA- 575
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+T L + + G D A+ MR+ K ++ P
Sbjct: 576 ---GYTLLSSI-------------------YASKGKWDSVAQLRRGMRE--KNVKKEPGQ 611
Query: 297 DLVLWNTMISGYSQKEE---YSDQALGCFKKLNRV----GYHPDDCSFV 338
+ W + +S +E Y DQ ++LN GY P D SFV
Sbjct: 612 SWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKP-DTSFV 659
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/642 (39%), Positives = 372/642 (57%), Gaps = 38/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y + + AR +FD + + DL+S+N++I+ A G A+ LF +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 129 TDGFTLSGLITASSN---NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
D +T++ ++ A+S+ L L KQ+H AI + V+ +L+ YSRN + EA+
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F D V+WN+M+ Y Q +G + L+LF M D +TLA++ L
Sbjct: 474 LFERHN--FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ G Q HA+ IKSG+ + + SG++D+Y KC GDM F+ IP PD V W TMI
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC-GDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SG + E ++A F ++ +G PD+ + + A S L+ G+QIHA +K+
Sbjct: 591 SGCIENGE-EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
+N V +LV MY+KCG+++DA LF R+ N + N+M+ G AQHG G E L+LF+
Sbjct: 650 -TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
M I P +TF+ VLSAC+H+G V+E K+ M +G +PE EHYSC+ D LGRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G + AE LIE+M + + A L+LEP ++ YV+L+
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
N+YAA+ KW+E+ R +M+ V+K PGFSWIEVK ++H+FV +D S+ + I+ ++
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 588 EMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
+M R +KQ GYVP +KE+ L +HSEKLAVAFGLLST PI V+KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+CGDCHNA+K+I+ + REI +RD RFH FKDG CSCGDYW
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 198/460 (43%), Gaps = 97/460 (21%)
Query: 6 LKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV 65
L+ + DL+ GK HA L +L N+ I +YSKCG L+ A
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYA------------ 93
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD-----TESALSLFK 120
R++FD++P DLVS+N++++AYA + + A LF+
Sbjct: 94 -------------------RRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL-------IKQLHCLAIYCGFDHYASVNNSLLTC 173
+R+ T TLS ++ LCL + H A G D V +L+
Sbjct: 135 ILRQDVVYTSRMTLSPML-----KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y + G + E K +F EM +D V WN M+ AY + EA+ L
Sbjct: 190 YLKFGKVKEGKVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAIDLSS------------- 235
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF--- 290
FH+ SG + N + L A+ SGD D +V
Sbjct: 236 ------------------AFHS----SGLNPNEIT----LRLLARISGDDSDAGQVKSFA 269
Query: 291 ---EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+ +++ N +S Y +YS L CF + D +F+ +++ +
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYS-ALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
S +LG+Q+H + +K+ + ++V+N+L+ MY K AR +FD M E + +S NS+
Sbjct: 329 DSLALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
IAG AQ+G+ +EA+ LF +L + P T SVL A +
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 115/245 (46%), Gaps = 40/245 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V KTC + GK +HA +K+ ++S+ + +Y KCG +SAA A
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---- 574
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
FD IP PD V++ T+IS + G+ E A +F
Sbjct: 575 ---------------------------FDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI-----KQLHCLAIYCGFDHYASVNNSLLTCYS 175
MR D FT++ L ASS CL +Q+H A+ + V SL+ Y+
Sbjct: 608 QMRLMGVLPDEFTIATLAKASS---CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G +D+A +F + E+ + +WN+M+V QH EG E LQLF++M SL + D T
Sbjct: 665 KCGSIDDAYCLFKRI-EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 236 SILTA 240
+L+A
Sbjct: 724 GVLSA 728
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 30/197 (15%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L G+ +HA LK ++ + +Y+KCG + A+ F + + N+ ++N +L
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 75 YARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD-- 128
A+ QLF Q+ +PD V++ ++SA + G A +K MR D
Sbjct: 694 LAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA---YKHMRSMHGDYG 750
Query: 129 -----------TDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
D +GL+ + N LI+ + + AS+ +LL
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAEN---LIESM-------SMEASASMYRTLLAACRVQ 800
Query: 178 GFLDEAKRVFYEMGEIK 194
G + KRV ++ E++
Sbjct: 801 GDTETGKRVATKLLELE 817
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/642 (38%), Positives = 375/642 (58%), Gaps = 37/642 (5%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
NVLL +Y R+ A LF++IP+ D V++NTLI+ Y G ++ LF MR+
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 129 TDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FT SG++ A ++ L +QLH L++ GF ASV N +L YS++ + E + +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F EM E+ D VS+N ++ +Y Q + +L F+EM + + A++L+ +L
Sbjct: 308 FDEMPEL-DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q H + + H+G+ L+D+YAKC + +F+ +PQ V W +IS
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM-FEEAELIFKSLPQRTTVSWTALIS 425
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIR 365
GY QK + L F K+ D +F V+ A ++ S LGKQ+HA I+
Sbjct: 426 GYVQKGLHG-AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N S + LV MY+KCG+++DA ++F+ MP+ N VS N++I+ +A +G G A+ F
Sbjct: 485 ENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
M+E+ + P +++ + VL+AC+H G V +G +YF M ++G P+ +HY+CM+DLLGR G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP-SNAVPYVMLA 527
+ +AE+L++ MPF P S+A +AA +E +A YV ++
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NIYAA+G+WE+V +++ MR+RG++K P +SW+EV ++HVF + D +HP EI +
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKIN 723
Query: 588 EMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLR 635
E++ ++++ GY PD K + L +HSE+LAVAF L+ST G PI+VMKNLR
Sbjct: 724 ELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLR 783
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
C DCH AIK IS I REITVRDT RFH F +G CSCGDYW
Sbjct: 784 ACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 243/469 (51%), Gaps = 12/469 (2%)
Query: 37 SNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDL 96
SN + + G +SAA +++ H N S N +++ + + ++SAR LFD +P +
Sbjct: 51 SNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV 110
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDT--DGFTLSGLITASSNNLC--LIKQLH 152
V++ L+ YA + A LF+ M T D T + L+ ++ + + Q+H
Sbjct: 111 VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVH 170
Query: 153 CLAIYCGFDH--YASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
A+ GFD + +V+N LL Y LD A +F E+ E KD V++N+++ Y +
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDG 229
Query: 211 EGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGS 270
E++ LF +M +T + +L A L D G Q HA + +GF +++ +G+
Sbjct: 230 LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN 289
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY 330
++D Y+K + M +F+E+P+ D V +N +IS YSQ ++Y + +L F+++ +G+
Sbjct: 290 QILDFYSKHDRVLETRM-LFDEMPELDFVSYNVVISSYSQADQY-EASLHFFREMQCMGF 347
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
+ F ++S +NLS +G+Q+H + + + + V N+LV MY+KC E+A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
+F +P+ TVS ++I+GY Q G+ L+LF M +N+ TF +VL A A
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ G++ + + E S ++D+ + G + DA ++ E MP
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP 514
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK L+ GK LHA +++ G L
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRS-------------------GNLE--------- 485
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
NVFS + L+ YA+ I A Q+F+++P + VS+N LISA+AD GD E+A+ F
Sbjct: 486 ---NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN------------N 168
M E D ++ G++TA S HC + G +++ +++
Sbjct: 543 KMIESGLQPDSVSILGVLTACS---------HCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 169 SLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQ 226
+L RNG EA+++ EM DE+ W+S++ A H+ A + +++ S++
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/694 (36%), Positives = 385/694 (55%), Gaps = 72/694 (10%)
Query: 18 GKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYAR 77
G +H + +KN + + +SN I LY KCG
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCG----------------------------- 243
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK--RFDTDGFTLS 135
+ AR LFD+ +V++N++IS YA G AL +F MR R F
Sbjct: 244 --NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 136 GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKD 195
+ A+ L +QLHC + GF ++ +L+ YS+ + +A R+F E+G + +
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VSW +M+ + Q+ EA+ LF EM + + +T + ILTA ++ + HA
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHA 417
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
++K+ + ++S +G+ L+D Y K G + + KVF I D+V W+ M++GY+Q E +
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKL-GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE-T 475
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISAC--SNLSPSLGKQIHALTIKIEIRSNRISVNN 373
+ A+ F +L + G P++ +F +++ C +N S GKQ H IK + S+ + V++
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS-LCVSS 534
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
AL+ MY+K GN+E A +F R E + VS NSMI+GYAQHG M+AL +F+ M + +
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 434 TNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERL 493
+TF+ V +AC H G V EG+KYF +M P EH SCM+DL RAG+L A ++
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 494 IEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKW 536
IE MP GS + AA + ++P ++ YV+L+N+YA SG W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 537 EEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQA 596
+E A +R+LM +R V+K+PG+SWIEVK + + F+A D SHP+ +I+ LE++S ++K
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 597 GYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAI 644
GY PD KE L HSE+LA+AFGL++T G P+L++KNLR+CGDCH I
Sbjct: 775 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVI 834
Query: 645 KFISAIAGREITVRDTYRFHCF-KDGRCSCGDYW 677
K I+ I REI VRD+ RFH F DG CSCGD+W
Sbjct: 835 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 213/391 (54%), Gaps = 11/391 (2%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ Y + R++FD++ + ++V++ TLIS YA + L+LF M+ + +
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 131 GFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
FT + + + + Q+H + + G D V+NSL+ Y + G + +A R+ +
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RILF 252
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E+K V+WNSM+ Y + LEAL +F M + L + AS++ +L++L
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISG 307
Q H ++K GF + +I + L+ Y+KC+ M D +++F+EI ++V W MISG
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA-MLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 308 YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSN 367
+ Q + ++A+ F ++ R G P++ ++ +++A +SPS ++HA +K +
Sbjct: 372 FLQNDG-KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS---EVHAQVVKTNYERS 427
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+V AL+ Y K G +E+A ++F + + + V+ ++M+AGYAQ G A+++F +
Sbjct: 428 S-TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 428 ETNIPPTNITFVSVLSACAHT-GKVAEGQKY 457
+ I P TF S+L+ CA T + +G+++
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 186/372 (50%), Gaps = 14/372 (3%)
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
R+ +A LFD+ P D SY +L+ ++ G T+ A LF ++ + D S ++
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 140 ASSNNLC---LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDE 196
S+ LC +QLHC I GF SV SL+ Y + + ++VF EM E ++
Sbjct: 102 VSAT-LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE-RNV 159
Query: 197 VSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVG--GLQFH 254
V+W +++ Y ++ E L LF M + + +T A+ L E+ VG GLQ H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA--EEGVGGRGLQVH 217
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
++K+G + + + LI+LY KC G++R +F++ +V WN+MISGY+
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKC-GNVRKARILFDKTEVKSVVTWNSMISGYAA-NGL 275
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNN 373
+ALG F + + SF VI C+NL +Q+H +K ++ ++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRT 334
Query: 374 ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
AL+ YSKC + DA RLF + N VS +MI+G+ Q+ EA+ LF M +
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 433 PTNITFVSVLSA 444
P T+ +L+A
Sbjct: 395 PNEFTYSVILTA 406
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 156 IYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEA 215
IYC + +V++S L Y+ + D++ +D S+ S++ + + EA
Sbjct: 32 IYC----FGTVSSSRL--YNAHNLFDKSPG--------RDRESYISLLFGFSRDGRTQEA 77
Query: 216 LQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDL 275
+LF + L + +D +S+L +L D + G Q H IK GF + +G+ L+D
Sbjct: 78 KRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDT 137
Query: 276 YAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDC 335
Y K S + +D KVF+E+ + ++V W T+ISGY+ + +D+ L F ++ G P+
Sbjct: 138 YMKGS-NFKDGRKVFDEMKERNVVTWTTLISGYA-RNSMNDEVLTLFMRMQNEGTQPNSF 195
Query: 336 SFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDR 394
+F + + G Q+H + +K + I V+N+L+ +Y KCGN+ AR LFD+
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 395 MPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
+ V+ NSMI+GYA +G+ +EAL +F M + + +F SV+ CA+
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 166/379 (43%), Gaps = 74/379 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC------------- 47
+F V+K C ++L + LH +K F + ++ YSKC
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 48 GCL------SAAHHAFNQTQ-----------------HANVFSFNVLLAA---------- 74
GC+ +A F Q N F+++V+L A
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVH 416
Query: 75 ---------------------YARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
Y + ++ A ++F I D+V+++ +++ YA G+TE
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 114 SALSLFKDMREKRFDTDGFTLSGLI---TASSNNLCLIKQLHCLAIYCGFDHYASVNNSL 170
+A+ +F ++ + + FT S ++ A++ ++ KQ H AI D V+++L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLD 230
LT Y++ G ++ A+ VF E KD VSWNSM+ Y QH + ++AL +F+EM ++ +D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
T + A T + G ++ +++ S ++DLY++ +G + MKV
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR-AGQLEKAMKV 654
Query: 290 FEEIPQP-DLVLWNTMISG 307
E +P P +W T+++
Sbjct: 655 IENMPNPAGSTIWRTILAA 673
Score = 36.2 bits (82), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 21/169 (12%)
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
L +A LFD+ P + S S++ G+++ G EA RLF + + F SVL
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 445 CAHTGKVAEG-QKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS 503
A G Q + +K FGF + + ++D + D ++
Sbjct: 103 SATLCDELFGRQLHCQCIK--FGFLDDVSVGTSLVDTYMKGSNFKDGRKV---------- 150
Query: 504 IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
F +++ N V + L + YA + +EV T+ M++ G Q
Sbjct: 151 --------FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/720 (36%), Positives = 401/720 (55%), Gaps = 70/720 (9%)
Query: 15 LVTGKSLHALYLKNLVP-FSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLA 73
+ TG+ AL + +P +S+ N I Y + G A F++ ++ S+NV++
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 74 AYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
Y R + AR+LF+ +P+ D+ S+NT++S YA G + A S+F M EK +
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 134 LSG-----------LITASSNNLCLIKQLHCL--------AIYCGFDHYASVN------- 167
LS ++ S N L+ +CL I + S+N
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALV-SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW 253
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N+++T Y+++G +DEA+++F E ++D +W +MV Y Q+R EA +LF +M
Sbjct: 254 NTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-- 310
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ + ++L + E + + L +N + +I YA+C G + +
Sbjct: 311 --NEVSWNAMLAGYVQGERM----EMAKELFDVMPCRNVSTWNTMITGYAQC-GKISEAK 363
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+F+++P+ D V W MI+GYSQ +S +AL F ++ R G + SF +S C+++
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSG-HSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 348 -SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LGKQ+H +K + V NAL+ MY KCG++E+A LF M + VS N+M
Sbjct: 423 VALELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
IAGY++HG G ALR FE M + P + T V+VLSAC+HTG V +G++YF M +G
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG 541
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
P +HY+CM+DLLGRAG L DA L++ MPF P + +A AA
Sbjct: 542 VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ +EP N+ YV+L+N+YA+SG+W +V +R MRD+GV+K PG+SWIE++ + H F
Sbjct: 602 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAF 617
D HP EI +LEE+ +MK+AGYV +KE+ + +HSE+LAVA+
Sbjct: 662 SVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAY 721
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G++ S G PI V+KNLR+C DCHNAIK+++ I GR I +RD RFH FKDG CSCGDYW
Sbjct: 722 GIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 197/399 (49%), Gaps = 35/399 (8%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+++ +NV +++Y R R A ++F ++P+ VSYN +IS Y G+ E A LF +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDE 182
E+ D + + +I N L K I D N++L+ Y++NG +D+
Sbjct: 122 PER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERD--VCSWNTMLSGYAQNGCVDD 175
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFT 242
A+ VF M E K++VSWN+++ AY Q+ + EA LF+ + L + +L F
Sbjct: 176 ARSVFDRMPE-KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFV 230
Query: 243 SLEDLVGGLQFHAHL-IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
+ +V QF + ++ N+ +I YA+ SG + + ++F+E P D+ W
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNT-----IITGYAQ-SGKIDEARQLFDESPVQDVFTW 284
Query: 302 NTMISGYSQKEEYSDQALGCFKKL---NRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
M+SGY Q ++A F K+ N V ++ +V G+++
Sbjct: 285 TAMVSGYIQN-RMVEEARELFDKMPERNEVSWNAMLAGYV------------QGERMEMA 331
Query: 359 TIKIEIRSNR-ISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ R +S N ++ Y++CG + +A+ LFD+MP+ + VS +MIAGY+Q G
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
EALRLF M +F S LS CA + G++
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 38/214 (17%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
+F L TC L GK LH +K ++ N +L+Y KCG + A+ F +
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N ++A Y+R G E AL F+
Sbjct: 471 AGKDIVSWNTMIAGYSRH-------------------------------GFGEVALRFFE 499
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS-----LLTCYS 175
M+ + D T+ +++A S+ + K Y Y + NS ++
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF--YTMTQDYGVMPNSQHYACMVDLLG 557
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
R G L++A + M D W +++ A H
Sbjct: 558 RAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N ++ Y + G +A R+F RMP ++VS N MI+GY ++G A +LF+ M E ++
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE--HYSCMIDLLGRAGKLTDA 490
N+ ++ + + ++ F +M PE + ++ M+ + G + DA
Sbjct: 128 SWNV----MIKGYVRNRNLGKARELFEIM-------PERDVCSWNTMLSGYAQNGCVDDA 176
Query: 491 ERLIEAMP 498
+ + MP
Sbjct: 177 RSVFDRMP 184
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/644 (38%), Positives = 371/644 (57%), Gaps = 41/644 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+A Y + R+ SAR++FD++ + D++S+N++I+ Y G E LS+F M +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
D T+ + A S + L + +H + + F N+LL YS+ G LD AK V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL--EALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
F EM + + VS+ SM+ Y REGL EA++LF+EM + D+YT+ ++L
Sbjct: 354 FREMSD-RSVVSYTSMIAGYA--REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G + H + ++ + + + L+D+YAKC G M++ VF E+ D++ WNT+
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC-GSMQEAELVFSEMRVKDIISWNTI 469
Query: 305 ISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
I GYS K Y+++AL F L + PD+ + CV+ AC++LS G++IH ++
Sbjct: 470 IGGYS-KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S+R V N+LV MY+KCG L A LFD + + VS MIAGY HG G EA+ L
Sbjct: 529 GYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F M + I I+FVS+L AC+H+G V EG ++F++M+ EP EHY+C++D+L
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
R G L A R IE MP P + +A K A +LEP N YV+
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 707
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
+ANIYA + KWE+V +R+ + RG++K PG SWIE+K ++++FVA D S+P + I +
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 767
Query: 586 LEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKN 633
L ++ +M + GY P +KE+ L HSEKLA+A G++S+ +G+ I V KN
Sbjct: 768 LRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 827
Query: 634 LRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
LR+CGDCH KF+S + REI +RD+ RFH FKDG CSC +W
Sbjct: 828 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 252/558 (45%), Gaps = 62/558 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C + L GK + N + L + L+Y+ CG L A F
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF--- 152
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
D++ + +N L++ A GD ++ LFK
Sbjct: 153 ----------------------------DEVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + D +T S ++ S ++L + +QLH + GF SV NSL+ Y +N
Sbjct: 185 KMMSSGVEMDSYTFS-CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
+D A++VF EM E +D +SWNS++ Y + + L +F +M+ + +D+ T+ S+
Sbjct: 244 QRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ G H+ +K+ F + + L+D+Y+KC GD+ VF E+
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC-GDLDSAKAVFREMSDRS 361
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
+V + +MI+GY+ +E + +A+ F+++ G PD + V++ C+ GK++H
Sbjct: 362 VVSYTSMIAGYA-REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
IK I V+NAL+ MY+KCG++++A +F M + +S N++I GY+++
Sbjct: 421 EW-IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 417 MEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHY 474
EAL LF +L E P T VL ACA +G++ +M++ G+ +
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN--GYFSDRHVA 537
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ ++D+ + G L A L F + + V + ++ Y G
Sbjct: 538 NSLVDMYAKCGALLLAHML------------------FDDIASKDLVSWTVMIAGYGMHG 579
Query: 535 KWEEVATIRRLMRDRGVQ 552
+E + MR G++
Sbjct: 580 FGKEAIALFNQMRQAGIE 597
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 218/403 (54%), Gaps = 14/403 (3%)
Query: 100 NTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIY 157
NT + + + G+ E+A+ L ++D D TL ++ A S +L K++
Sbjct: 65 NTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 158 CGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQ 217
GF +++ + L Y+ G L EA RVF E+ +I+ + WN ++ + + ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV-KIEKALFWNILMNELAKSGDFSGSIG 181
Query: 218 LFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYA 277
LF++M+S + +D YT + + +F+SL + GG Q H ++KSGF + + +G+ L+ Y
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 278 KCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSF 337
K + + KVF+E+ + D++ WN++I+GY +++ L F ++ G D +
Sbjct: 242 K-NQRVDSARKVFDEMTERDVISWNSIINGYVSN-GLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 338 VCVISACSNLS-PSLGKQIHALTIKIEI-RSNRISVNNALVAMYSKCGNLEDARRLFDRM 395
V V + C++ SLG+ +H++ +K R +R N L+ MYSKCG+L+ A+ +F M
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC--NTLLDMYSKCGDLDSAKAVFREM 357
Query: 396 PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
+ + VS SMIAGYA+ G+ EA++LFE M E I P T +VL+ CA + EG+
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 456 KYFSMMKDM-FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +K+ GF+ + ++D+ + G + +AE + M
Sbjct: 418 RVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEM 458
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 23/330 (6%)
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
VS + +D TL S+L + L G + + +GF +S++GS L +Y C GD
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNC-GD 144
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+++ +VF+E+ + WN +++ ++ ++S ++G FKK+ G D +F CV
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSG-SIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 343 ACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTV 401
+ S+L S G+Q+H +K R SV N+LVA Y K ++ AR++FD M E + +
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM 461
S NS+I GY +G+ + L +F ML + I T VSV + CA + ++ G+ S+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 462 KDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAV 521
F E + ++D+ + G L A+ + F ++ + V
Sbjct: 323 VKAC-FSREDRFCNTLLDMYSKCGDLDSAKAV------------------FREMSDRSVV 363
Query: 522 PYVMLANIYAASGKWEEVATIRRLMRDRGV 551
Y + YA G E + M + G+
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 46/316 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R L GK +H +N + F ++SN + +Y+KCG + A F++
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ ++ S+N ++ Y++ + YA+ ALSLF
Sbjct: 459 RVKDIISWNTIIGGYSK--------------------------NCYAN-----EALSLFN 487
Query: 121 -DMREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ EKRF D T++ ++ A ++ K ++H + G+ V NSL+ Y++
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G L A +F ++ KD VSW M+ YG H G EA+ LF +M + D + S+
Sbjct: 548 GALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 238 LTAFTSLEDLVGGLQF-----HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEE 292
L A + + G +F H I+ + I +D+ A+ +GD+ + E
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI----VDMLAR-TGDLIKAYRFIEN 661
Query: 293 IP-QPDLVLWNTMISG 307
+P PD +W ++ G
Sbjct: 662 MPIPPDATIWGALLCG 677
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/774 (34%), Positives = 417/774 (53%), Gaps = 118/774 (15%)
Query: 12 RRDLVTGKSLHALYLKNLVPFS----AYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFS 67
R L +++H N++ F A++ N I +Y K L+ A F++ + +
Sbjct: 27 RTSLQLARAVHG----NIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIA 82
Query: 68 FNVLLAAYARQLRIASARQLFDQIP--QPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+++ Y I AR +F++ P D V YN +I+ ++ D SA++LF M+ +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 126 RFDTDGFT----LSGL-ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---- 176
F D FT L+GL + A C+ Q H A+ G + SV+N+L++ YS+
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCV--QFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR---------EGL-------------- 213
L A++VF E+ E KDE SW +M+ Y ++ EG+
Sbjct: 201 PSLLHSARKVFDEILE-KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 214 ---------EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQ 264
EAL++ + MVS + LD +T S++ A + L G Q HA++++
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DF 318
Query: 265 NSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY--------------SQ 310
+ H + L+ LY KC G + +FE++P DLV WN ++SGY
Sbjct: 319 SFHFDNSLVSLYYKC-GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 311 KEE----------------YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GK 353
KE+ + ++ L F + R G+ P D +F I +C+ L G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
Q HA +KI S+ +S NAL+ MY+KCG +E+AR++F MP ++VS N++IA QH
Sbjct: 438 QYHAQLLKIGFDSS-LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G EA+ ++E ML+ I P IT ++VL+AC+H G V +G+KYF M+ ++ P +H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLE 516
Y+ +IDLL R+GK +DAE +IE++PF P + + + AA+ L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
P + Y++L+N++AA+G+WEEVA +R+LMRDRGV+K+ SWIE++ Q+H F+ +D SH
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTS 623
P + ++ YL+++ ++M++ GYVPD KE L HSEK+AVAFGL+
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I + KNLR CGDCHN +F+S + R+I +RD RFH F++G CSCG++W
Sbjct: 737 PGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 29/322 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V++ C L GK +HA L+ FS + N + LY KCG A F +
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ S+N LL+ Y I A+ +F ++ + +++S+ +IS A+ G E L LF
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M+ + F+ + SG I + + C +Q H + GFD S N+L+T Y++ G
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
++EA++VF M + D VSWN+++ A GQH G EA+ +++EM+ + D TL ++L
Sbjct: 467 VVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG------FHQNSHIGSG------LIDLYAKCSGDMRDC 286
TA + HA L+ G I G LIDL + SG D
Sbjct: 526 TACS-----------HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCR-SGKFSDA 573
Query: 287 MKVFEEIP-QPDLVLWNTMISG 307
V E +P +P +W ++SG
Sbjct: 574 ESVIESLPFKPTAEIWEALLSG 595
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 263/647 (40%), Positives = 376/647 (58%), Gaps = 42/647 (6%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ YA+ IA AR++F + D VS+N++I+ G A+ +K MR
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 129 TDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
FTL ++ AS L +Q+H ++ G D SV+N+L+T Y+ G+L+E +++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGL-EALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
F M E D+VSWNS++ A + L EA+ F L+ T +S+L+A +SL
Sbjct: 473 FSSMPE-HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTM 304
G Q H +K+ + + LI Y KC G+M C K+F + + D V WN+M
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKC-GEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIE 363
ISGY E + +AL + + G D + V+SA ++++ G ++HA +++
Sbjct: 591 ISGYIHNELLA-KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ S+ + V +ALV MYSKCG L+ A R F+ MP N+ S NSMI+GYA+HG G EAL+LF
Sbjct: 650 LESD-VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 424 EWM-LETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
E M L+ PP ++TFV VLSAC+H G + EG K+F M D +G P EH+SCM D+LG
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 483 RAGKLTDAERLIEAMPFNP-------------------GSIALKAANHFLQLEPSNAVPY 523
RAG+L E IE MP P + KAA QLEP NAV Y
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 828
Query: 524 VMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIH 583
V+L N+YAA G+WE++ R+ M+D V+K+ G+SW+ +K +H+FVA D SHP I+
Sbjct: 829 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIY 888
Query: 584 NYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLST-SYGEPILV 630
L+E++RKM+ AGYVP +KE+ L +HSEKLAVAF L + S PI +
Sbjct: 889 KKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRI 948
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
MKNLR+CGDCH+A K+IS I GR+I +RD+ RFH F+DG CSC D+W
Sbjct: 949 MKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 215/426 (50%), Gaps = 50/426 (11%)
Query: 1 TFRQVLKTC--VGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC-GCLSAAHHAF 57
F VL+ C +G ++ G+ +H L K A +SN I +Y KC G + A AF
Sbjct: 104 AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 58 NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALS 117
+ N S+ N++IS Y+ GD SA
Sbjct: 164 GDIEVKNSVSW-------------------------------NSIISVYSQAGDQRSAFR 192
Query: 118 LFKDMREKRFDTDGFTLSGLITASSN----NLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
+F M+ +T L+T + + ++ L++Q+ C G V + L++
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
++++G L A++VF +M E ++ V+ N ++V + + G EA +LF +M S+ + + +
Sbjct: 253 FAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPES 310
Query: 234 LASILTAFT--SLEDLVG---GLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCM 287
+L++F SL + VG G + H H+I +G IG+GL+++YAKC G + D
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC-GSIADAR 369
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF + D V WN+MI+G Q + +A+ +K + R P + + +S+C++L
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFI-EAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 348 S-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
LG+QIH ++K+ I N +SV+NAL+ +Y++ G L + R++F MPEH+ VS NS+
Sbjct: 429 KWAKLGQQIHGESLKLGIDLN-VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 407 IAGYAQ 412
I A+
Sbjct: 488 IGALAR 493
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 223/449 (49%), Gaps = 20/449 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
+V+ N L+ AY SAR++FD++P + VS+ ++S Y+ G+ + AL +DM
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 124 EKRFDTDGFTLSGLITA----SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN-G 178
++ ++ + ++ A S + +Q+H L + A V+N L++ Y + G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ A F ++ E+K+ VSWNS++ Y Q + A ++F M YT S++
Sbjct: 155 SVGYALCAFGDI-EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 239 TAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
T SL + L Q + KSG + +GSGL+ +AK SG + KVF ++
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK-SGSLSYARKVFNQMETR 272
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS----- 350
+ V N ++ G ++++ ++A F +N + P+ S+V ++S+ S +
Sbjct: 273 NAVTLNGLMVGLV-RQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGL 329
Query: 351 -LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
G+++H I + + + N LV MY+KCG++ DARR+F M + ++VS NSMI G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
Q+G +EA+ ++ M +I P + T +S LS+CA GQ+ + G +
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDL 448
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ ++ L G L + ++ +MP
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 150/396 (37%), Gaps = 107/396 (27%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T L +C + G+ +H LK + + +SN + LY++ G L+ F+
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 61 QHANVFSFNVLLAAYARQ-----------LRIASARQLFDQIP----------------- 92
+ S+N ++ A AR L A Q ++I
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 93 ------------QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
+ + N LI+ Y CG+ + +F M E+R D T + +I+
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR---DNVTWNSMISG 593
Query: 141 SSNNLCLIKQL-------------------------------------HCLAIYCGFDHY 163
+N L K L H ++ +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM- 222
V ++L+ YS+ G LD A R F M +++ SWNSM+ Y +H +G EAL+LF+ M
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG------------S 270
+ Q D T +L+A + HA L++ GF + S
Sbjct: 713 LDGQTPPDHVTFVGVLSACS-----------HAGLLEEGFKHFESMSDSYGLAPRIEHFS 761
Query: 271 GLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ D+ + +G++ E++P +P++++W T++
Sbjct: 762 CMADVLGR-AGELDKLEDFIEKMPMKPNVLIWRTVL 796
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 261/708 (36%), Positives = 388/708 (54%), Gaps = 68/708 (9%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +LK C +L GK +H L +K+ FS
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKS--GFSL--------------------------- 168
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
++F+ L YA+ ++ AR++FD++P+ DLVS+NT+++ Y+ G AL + K
Sbjct: 169 --DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M E+ T+ ++ A S L LI K++H A+ GFD +++ +L+ Y++ G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSA-LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ A+++F M E ++ VSWNSM+ AY Q+ EA+ +FQ+M+ + ++ L
Sbjct: 286 SLETARQLFDGMLE-RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL G H ++ G +N + + LI +Y KC ++ +F ++ L
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK-EVDTAASMFGKLQSRTL 403
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
V WN MI G++Q D AL F ++ PD ++V VI+A + LS + K IH
Sbjct: 404 VSWNAMILGFAQNGRPID-ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+ ++ + N + V ALV MY+KCG + AR +FD M E + + N+MI GY HG G
Sbjct: 463 VVMRSCLDKN-VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
AL LFE M + I P +TF+SV+SAC+H+G V G K F MMK+ + E +HY M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNA 520
+DLLGRAG+L +A I MP P + A KAA +L P +
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
+V+LANIY A+ WE+V +R M +G++K PG S +E+K ++H F + +HP K
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 581 EIHNYLEEMSRKMKQAGYVPD-----------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
+I+ +LE++ +K+AGYVPD KE+ L HSEKLA++FGLL+T+ G I
Sbjct: 702 KIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V KNLR+C DCHNA K+IS + GREI VRD RFH FK+G CSCGDYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 172/322 (53%), Gaps = 5/322 (1%)
Query: 135 SGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIK 194
+ L+ ++L ++Q+ L G L++ + R G +DEA RVF E + K
Sbjct: 40 AALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVF-EPIDSK 98
Query: 195 DEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFH 254
V +++M+ + + + +ALQ F M + +Y +L +L G + H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 255 AHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEY 314
L+KSGF + +GL ++YAKC + + KVF+ +P+ DLV WNT+++GYSQ
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCR-QVNEARKVFDRMPERDLVSWNTIVAGYSQN-GM 216
Query: 315 SDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNN 373
+ AL K + P + V V+ A S L S+GK+IH ++ S ++++
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS-LVNIST 275
Query: 374 ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPP 433
ALV MY+KCG+LE AR+LFD M E N VS NSMI Y Q+ EA+ +F+ ML+ + P
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 434 TNITFVSVLSACAHTGKVAEGQ 455
T+++ + L ACA G + G+
Sbjct: 336 TDVSVMGALHACADLGDLERGR 357
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 188/418 (44%), Gaps = 43/418 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL R + GK +H +++ +S + +Y+KCG L A F+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 61 QHANVFSFNVLLAAYARQLRIASA----RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
NV S+N ++ AY + A +++ D+ +P VS + A AD GD E
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG- 356
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
RF +H L++ G D SV NSL++ Y +
Sbjct: 357 ---------RF-----------------------IHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
+D A +F ++ + + VSWN+M++ + Q+ ++AL F +M S + D +T S
Sbjct: 385 CKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++TA L H +++S +N + + L+D+YAKC G + +F+ + +
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC-GAIMIARLIFDMMSER 502
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+ WN MI GY + AL F+++ + P+ +F+ VISACS+ S + +
Sbjct: 503 HVTTWNAMIDGYGT-HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH-SGLVEAGLK 560
Query: 357 ALTIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ E S +S+++ A+V + + G L +A +MP V++ + G Q
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV+++ + G++++A R+F+ + V ++M+ G+A+ +AL+ F M ++ P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
F +L C ++ G++ ++ GF + + + ++ + ++ +A ++
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 495 EAMP 498
+ MP
Sbjct: 194 DRMP 197
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 380/669 (56%), Gaps = 49/669 (7%)
Query: 55 HAFN-QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
HA+ + N F N L+A Y + ++AS++ L DLV++NT++S+
Sbjct: 225 HAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCG-FDHYASVNNSL 170
AL ++M + + D FT+S ++ A S+ L K+LH A+ G D + V ++L
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 171 LTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGL 229
+ Y + +RVF M + K + WN+M+ Y Q+ EAL LF M S L
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ T+A ++ A H ++K G ++ + + L+D+Y++ G + M++
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL-GKIDIAMRI 462
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN----------RVGYHPDDCSFVC 339
F ++ DLV WNTMI+GY E + D L K N RV P+ + +
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 340 VISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
++ +C+ LS + GK+IHA IK + ++ ++V +ALV MY+KCG L+ +R++FD++P+
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
N ++ N +I Y HG G EA+ L M+ + P +TF+SV +AC+H+G V EG + F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP--FNPG-------------- 502
+MK +G EP +HY+C++DLLGRAG++ +A +L+ MP FN
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 503 --SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWI 560
I AA + +QLEP+ A YV+LANIY+++G W++ +RR M+++GV+K+PG SWI
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVH 608
E ++H FVA D SHP +++ YLE + +M++ GYVPD KE L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821
Query: 609 HSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKD 668
HSEKLA+AFG+L+TS G I V KNLR+C DCH A KFIS I REI +RD RFH FK+
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 669 GRCSCGDYW 677
G CSCGDYW
Sbjct: 882 GTCSCGDYW 890
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 267/572 (46%), Gaps = 77/572 (13%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +LK +D+ GK +HA +Y S ++N + LY KCG A +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY------ 153
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++FD+I + + VS+N+LIS+ E AL F+
Sbjct: 154 -------------------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 121 DMREKRFDTDGFTLSGLITASSN-----NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
M ++ + FTL ++TA SN L + KQ+H + G + + + N+L+ Y
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYG 247
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G L +K + G +D V+WN+++ + Q+ + LEAL+ +EMV + D +T++
Sbjct: 248 KLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP 294
S+L A + LE L G + HA+ +K+G +NS +GS L+D+Y C + +VF+ +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK-QVLSGRRVFDGMF 365
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGK 353
+ LWN MI+GYSQ E + L G + + V+ AC S +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
IH +K + +R V N L+ MYS+ G ++ A R+F +M + + V+ N+MI GY
Sbjct: 426 AIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 414 GIGMEALRLFEWM--LE---------TNIPPTNITFVSVLSACAHTGKVAEGQKY--FSM 460
+AL L M LE ++ P +IT +++L +CA +A+G++ +++
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 461 MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNA 520
++ G S ++D+ + G L + ++ + +P N
Sbjct: 545 KNNLATDVAVG---SALVDMYAKCGCLQMSRKVFDQIP------------------QKNV 583
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+ + ++ Y G +E + R+M +GV+
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 193/417 (46%), Gaps = 60/417 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C L TGK LHA LKN G L
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKN-------------------GSLD--------- 335
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N F + L+ Y ++ S R++FD + + +N +I+ Y+ + AL LF
Sbjct: 336 --ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 121 DMREKR-FDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M E + T++G++ A S + +H + G D V N+L+ YSR
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAY--GQHREGLEALQLFQEMVSLQ--------- 226
G +D A R+F +M E +D V+WN+M+ Y +H E +AL L +M +L+
Sbjct: 454 GKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHE--DALLLLHKMQNLERKVSKGASR 510
Query: 227 --LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMR 284
L + TL +IL + +L L G + HA+ IK+ + +GS L+D+YAKC G ++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC-GCLQ 569
Query: 285 DCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISAC 344
KVF++IPQ +++ WN +I Y +A+ + + G P++ +F+ V +AC
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGN-GQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 345 SNLSPSLGKQIHALTI-----KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
S+ S + + + + +E S+ + +V + + G +++A +L + MP
Sbjct: 629 SH-SGMVDEGLRIFYVMKPDYGVEPSSDHYA---CVVDLLGRAGRIKEAYQLMNMMP 681
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 11/290 (3%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGL 272
EA+ + +M+ L + D Y ++L A L+D+ G Q HAH+ K G+ +S + + L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
++LY KC GD KVF+ I + + V WN++IS E++ + AL F+ + P
Sbjct: 140 VNLYRKC-GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENVEP 197
Query: 333 DDCSFVCVISACSNLS-PS---LGKQIHALTI-KIEIRSNRISVNNALVAMYSKCGNLED 387
+ V V++ACSNL P +GKQ+HA + K E+ S I N LVAMY K G L
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII---NTLVAMYGKLGKLAS 254
Query: 388 ARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAH 447
++ L + V+ N++++ Q+ +EAL M+ + P T SVL AC+H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 448 TGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ G++ + + S ++D+ ++ R+ + M
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T V+ CV +++H +K + ++ N + +YS+ G + A F +
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ DLV++NT+I+ Y E AL L
Sbjct: 467 E-------------------------------DRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 121 DMR--EKR---------FDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVN 167
M+ E++ + TL ++ A+ + L K++H AI +V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ Y++ G L +++VF ++ + K+ ++WN +++AYG H G EA+ L + M+ +
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDC 286
+ T S+ A + + GL+ F+ G +S + ++DL + +G +++
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR-AGRIKEA 673
Query: 287 MKVFEEIPQ 295
++ +P+
Sbjct: 674 YQLMNMMPR 682
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/630 (36%), Positives = 353/630 (56%), Gaps = 37/630 (5%)
Query: 81 IASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA 140
I ARQ+FD +P+P + +N +I Y+ + AL ++ +M+ R D FT L+ A
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 141 SS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMG-EIKDEV 197
S ++L + + +H GFD V N L+ Y++ L A+ VF + + V
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
SW ++V AY Q+ E +EAL++F +M + + D L S+L AFT L+DL G HA +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 258 IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ 317
+K G + L +YAKC G + +F+++ P+L+LWN MISGY+ K Y+ +
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKC-GQVATAKILFDKMKSPNLILWNAMISGYA-KNGYARE 306
Query: 318 ALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
A+ F ++ PD S ISAC+ + S + ++ + + R + + +++AL+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD-VFISSALI 365
Query: 377 AMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
M++KCG++E AR +FDR + + V ++MI GY HG EA+ L+ M + P ++
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 437 TFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEA 496
TF+ +L AC H+G V EG +F+ M D P+ +HY+C+IDLLGRAG L A +I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 497 MPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEV 539
MP PG + AA ++PSN YV L+N+YAA+ W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 540 ATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYV 599
A +R M+++G+ K G SW+EV+ ++ F D SHP +EI +E + ++K+ G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 600 PDK------------EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFI 647
+K E+ L HSE++A+A+GL+ST G P+ + KNLR C +CH A K I
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 648 SAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
S + REI VRDT RFH FKDG CSCGDYW
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 38/350 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C G L G+ +HA + ++ N I LY+KC
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC------------- 167
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGDTESALSL 118
R+ SAR +F+ +P P+ +VS+ ++SAYA G+ AL +
Sbjct: 168 ------------------RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F MR+ D L ++ A + +L + +H + G + + SL T Y++
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G + AK +F +M + + + WN+M+ Y ++ EA+ +F EM++ + D ++ S
Sbjct: 270 CGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
++A + L + ++ +S + + I S LID++AKC G + VF+
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC-GSVEGARLVFDRTLDR 387
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN 346
D+V+W+ MI GY + +A+ ++ + R G HP+D +F+ ++ AC++
Sbjct: 388 DVVVWSAMIVGYGLHGR-AREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/642 (36%), Positives = 365/642 (56%), Gaps = 44/642 (6%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK---RF 127
++ Y + R+ AR++FD++P+ D + +NT+IS Y ++ +F+D+ + R
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 128 DTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKR 185
DT TL ++ A + L L Q+H LA G + V ++ YS+ G +
Sbjct: 220 DTT--TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 186 VFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLE 245
+F E + D V++N+M+ Y + E +L LF+E++ L TL S++ L
Sbjct: 278 LFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 246 DLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMI 305
+ H + +KS F ++ + + L +Y+K + ++ K+F+E P+ L WN MI
Sbjct: 337 LIYA---IHGYCLKSNFLSHASVSTALTTVYSKLN-EIESARKLFDESPEKSLPSWNAMI 392
Query: 306 SGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEI 364
SGY+Q ++ A+ F+++ + + P+ + C++SAC+ L SLGK +H L +
Sbjct: 393 SGYTQNG-LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 365 RSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFE 424
S+ I V+ AL+ MY+KCG++ +ARRLFD M + N V+ N+MI+GY HG G EAL +F
Sbjct: 452 ESS-IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 425 WMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRA 484
ML + I PT +TF+ VL AC+H G V EG + F+ M +GFEP +HY+CM+D+LGRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 485 GKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLA 527
G L A + IEAM PGS +A + +L+P N +V+L+
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 528 NIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLE 587
NI++A + + AT+R+ + R + K PG++ IE+ + HVF + D SHP +KEI+ LE
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 588 EMSRKMKQAGYVPDKEKRLVH------------HSEKLAVAFGLLSTSYGEPILVMKNLR 635
++ KM++AGY P+ E L HSE+LA+AFGL++T G I ++KNLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 636 ICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+C DCH K IS I R I VRD RFH FKDG CSCGDYW
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 252/513 (49%), Gaps = 29/513 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKR-FDTDGFTLSGLITASS 142
AR +F + +PD+ +N L+ ++ S+LS+F +R+ + T + I+A+S
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 143 --NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
+ + +H A+ G D + ++++ Y + +++A++VF M E KD + WN
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWN 189
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
+M+ Y ++ +E++Q+F+++++ LD TL IL A L++L G+Q H+ K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
+G + + ++ +G I LY+KC G ++ +F E +PD+V +N MI GY+ E ++ +L
Sbjct: 250 TGCYSHDYVLTGFISLYSKC-GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE-TELSL 307
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
FK+L G + V ++ +L L IH +K S+ SV+ AL +Y
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHL--MLIYAIHGYCLKSNFLSH-ASVSTALTTVY 364
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
SK +E AR+LFD PE + S N+MI+GY Q+G+ +A+ LF M ++ P +T
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+LSACA G ++ G+ +++ FE + +I + + G + +A RL + M
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT- 482
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
N V + + + Y G+ +E I M + G+ P
Sbjct: 483 -----------------KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
+ H + ++G IH Y E S K
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%), Gaps = 45/322 (13%)
Query: 20 SLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQL 79
++H LK+ A +S +YSK + +A F+++ ++ S+N +++ Y +
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN- 398
Query: 80 RIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT 139
G TE A+SLF++M++ F + T++ +++
Sbjct: 399 ------------------------------GLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 140 ASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV 197
A + L L K +H L F+ V+ +L+ Y++ G + EA+R+F M + K+EV
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK-KNEV 487
Query: 198 SWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV--GGLQFHA 255
+WN+M+ YG H +G EAL +F EM++ + T +L A S LV G F++
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA-CSHAGLVKEGDEIFNS 546
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEY 314
+ + GF + + ++D+ + +G ++ ++ E + +P +W T++ G + +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGR-AGHLQRALQFIEAMSIEPGSSVWETLL-GACRIHKD 604
Query: 315 SDQALGCFKKL-----NRVGYH 331
++ A +KL + VGYH
Sbjct: 605 TNLARTVSEKLFELDPDNVGYH 626
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 252 QFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD------CMKVFEEIPQPDLVLWNTMI 305
Q HA +I GF + I L K + + D +F + +PD+ L+N ++
Sbjct: 38 QTHAQIILHGFRND-------ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 306 SGYSQKEEYSDQALGCFKKLNR-VGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIE 363
G+S E +L F L + P+ ++ ISA S G+ IH + ++
Sbjct: 91 RGFSVNES-PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV-VD 148
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ + + + +V MY K +EDAR++FDRMPE +T+ N+MI+GY ++ + +E++++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 424 EWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSM 460
++ E+ T + +L A A ++ G + S+
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +H L S Y+S I +Y+KCG
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS----------- 470
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
IA AR+LFD + + + V++NT+IS Y G + AL++F
Sbjct: 471 --------------------IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 121 DM 122
+M
Sbjct: 511 EM 512
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/640 (36%), Positives = 364/640 (56%), Gaps = 38/640 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+A Y + R AR++FD++ D VSYNT+I Y E ++ +F + ++ F D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 131 GFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
T+S ++ A + +L L K ++ + GF ++V N L+ Y++ G + A+ VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
M E KD VSWNS++ Y Q + +EA++LF+ M+ ++ D T +++ T L DL
Sbjct: 367 SM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G H++ IKSG + + + LID+YAKC G++ D +K+F + D V WNT+IS
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKC-GEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSN 367
+ +++ L ++ + PD +F+ + C++L+ LGK+IH ++ S
Sbjct: 485 VRFGDFA-TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
+ + NAL+ MYSKCG LE++ R+F+RM + V+ MI Y +G G +AL F M
Sbjct: 544 -LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
++ I P ++ F++++ AC+H+G V EG F MK + +P EHY+C++DLL R+ K+
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 488 TDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIY 530
+ AE I+AMP P + A + + ++L P + ++ +N Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
AA KW++V+ IR+ ++D+ + K PG+SWIEV K +HVF + D S P + I+ LE +
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Query: 591 RKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRIC 637
M + GY+PD K + + HSE+LA+AFGLL+T G P+ VMKNLR+C
Sbjct: 783 SLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVC 842
Query: 638 GDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GDCH K IS I GREI VRD RFH FKDG CSC D W
Sbjct: 843 GDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 260/491 (52%), Gaps = 26/491 (5%)
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+++F N L+ Y+R + ARQ+FD++P DLVS+N+LIS Y+ G E AL ++ +
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRNG 178
++ D FT+S ++ A NL ++KQ LH A+ G + VNN L+ Y +
Sbjct: 198 LKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+RVF EM +++D VS+N+M+ Y + E++++F E + Q D+ T++S+L
Sbjct: 257 RPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVL 314
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A L DL + +++K+GF S + + LID+YAKC GDM VF + D
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC-GDMITARDVFNSMECKDT 373
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V WN++ISGY Q + +A+ FK + + D +++ +IS + L+ GK +H+
Sbjct: 374 VSWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
IK I + +SV+NAL+ MY+KCG + D+ ++F M +TV+ N++I+ + G
Sbjct: 433 NGIKSGICID-LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
L++ M ++ + P TF+ L CA G++ + FG+E E + + +
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNAL 550
Query: 478 IDLLGRAGKLTDAERLIEAMPFN-----PGSI--------ALKAANHFLQLEPSNAVP-- 522
I++ + G L ++ R+ E M G I KA F +E S VP
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 523 YVMLANIYAAS 533
V +A IYA S
Sbjct: 611 VVFIAIIYACS 621
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 237/486 (48%), Gaps = 47/486 (9%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA-NVFSFNVLLAAYAR 77
+ +HAL + + S + S I YS +++ F + A NV+ +N ++ A+++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 78 QLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFT 133
A + + ++ + PD ++ ++I A A D E +++ + + F++D F
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF- 142
Query: 134 LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEI 193
V N+L+ YSR G L A++VF EM +
Sbjct: 143 --------------------------------VGNALVDMYSRMGLLTRARQVFDEM-PV 169
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
+D VSWNS++ Y H EAL+++ E+ + + D +T++S+L AF +L + G
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEE 313
H +KSG + + +GL+ +Y K D +VF+E+ D V +NTMI GY + E
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPT-DARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 314 YSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVN 372
+ + L++ + PD + V+ AC +L SL K I+ +K +V
Sbjct: 289 VEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES-TVR 345
Query: 373 NALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
N L+ +Y+KCG++ AR +F+ M +TVS NS+I+GY Q G MEA++LF+ M+
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSM-MKDMFGFEPEGEHYSCMIDLLGRAGKLTDAE 491
+IT++ ++S + G+ S +K G + + +ID+ + G++ D+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 492 RLIEAM 497
++ +M
Sbjct: 464 KIFSSM 469
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSW 199
+SS+NL ++++H L I G D + L+ YS + VF + K+ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 200 NSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIK 259
NS++ A+ ++ EAL+ + ++ ++ D YT S++ A L D G + ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 260 SGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQAL 319
GF + +G+ L+D+Y++ G + +VF+E+P DLV WN++ISGYS Y ++AL
Sbjct: 135 MGFESDLFVGNALVDMYSRM-GLLTRARQVFDEMPVRDLVSWNSLISGYSS-HGYYEEAL 192
Query: 320 GCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAM 378
+ +L PD + V+ A N L G+ +H +K ++ + VNN LVAM
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK-SGVNSVVVVNNGLVAM 251
Query: 379 YSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITF 438
Y K DARR+FD M ++VS N+MI GY + + E++R+F L+ P +T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTV 310
Query: 439 VSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
SVL AC H ++ + ++ M GF E + +ID+ + G + A + +M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI-PQ 295
I A +S +L + HA +I G + LID Y+ + + VF + P
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFR-EPASSLSVFRRVSPA 68
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQ 354
++ LWN++I +S+ + +AL + KL PD +F VI AC+ L +G
Sbjct: 69 KNVYLWNSIIRAFSKNGLFP-EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
++ + + S+ + V NALV MYS+ G L AR++FD MP + VS NS+I+GY+ HG
Sbjct: 128 VYEQILDMGFESD-LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ 455
EAL ++ + + I P + T SVL A + V +GQ
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 34/242 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ ++ DL GK LH+ +K+ + +SN I +Y+KCG
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG------------ 457
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + ++F + D V++NT+ISA GD + L +
Sbjct: 458 -------------------EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 121 DMREKRF--DTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR+ D F ++ + AS L K++HC + G++ + N+L+ YS+ G
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L+ + RVF M +D V+W M+ AYG + EG +AL+ F +M + D +I+
Sbjct: 559 CLENSSRVFERMSR-RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Query: 239 TA 240
A
Sbjct: 618 YA 619
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRM-PEHN 399
+S+ SNL+ ++IHAL I + + S+ + L+ YS + +F R+ P N
Sbjct: 14 LSSSSNLNEL--RRIHALVISLGLDSSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
NS+I ++++G+ EAL + + E+ + P TF SV+ ACA G +
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 460 MMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ DM GFE + + ++D+ R G LT A ++ + MP
Sbjct: 131 QILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 78/212 (36%), Gaps = 42/212 (19%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C GK +H L+ + N I +YSKCGCL + F
Sbjct: 511 TFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF--- 567
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+++ + D+V++ +I AY G+ E AL F
Sbjct: 568 ----------------------------ERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
DM + D +I A S++ + + L C I +HYA V + L
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL--- 656
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVA 205
SR+ + +A+ M D W S++ A
Sbjct: 657 -SRSQKISKAEEFIQAMPIKPDASIWASVLRA 687
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/548 (40%), Positives = 322/548 (58%), Gaps = 35/548 (6%)
Query: 160 FDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLF 219
F H + N+LL Y++ G L+EA++VF +M + +D V+W +++ Y QH +AL F
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFF 149
Query: 220 QEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC 279
+M+ + +TL+S++ A + G Q H +K GF N H+GS L+DLY +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR- 208
Query: 280 SGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G M D VF+ + + V WN +I+G++++ +++AL F+ + R G+ P S+
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSG-TEKALELFQGMLRDGFRPSHFSYAS 267
Query: 340 VISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEH 398
+ ACS+ GK +HA IK + + N L+ MY+K G++ DAR++FDR+ +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS NS++ YAQHG G EA+ FE M I P I+F+SVL+AC+H+G + EG Y+
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA---------- 508
+MK G PE HY ++DLLGRAG L A R IE MP P + KA
Sbjct: 387 ELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 509 -------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIE 561
A H +L+P + P+V+L NIYA+ G+W + A +R+ M++ GV+K+P SW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 562 VKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVH------------H 609
++ +H+FVA D HP +EI EE+ K+K+ GYVPD +VH H
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYH 565
Query: 610 SEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDG 669
SEK+A+AF LL+T G I + KN+R+CGDCH AIK S + GREI VRDT RFH FKDG
Sbjct: 566 SEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDG 625
Query: 670 RCSCGDYW 677
CSC DYW
Sbjct: 626 NCSCKDYW 633
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 168/322 (52%), Gaps = 31/322 (9%)
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L T + L+ G HAH+++S F + +G+ L+++YAKC G + + KVFE++PQ
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-GSLEEARKVFEKMPQ 123
Query: 296 PDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVI-SACSNLSPSLGKQ 354
D V W T+ISGYSQ + D AL F ++ R GY P++ + VI +A + G Q
Sbjct: 124 RDFVTWTTLISGYSQHDRPCD-ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHG 414
+H +K SN + V +AL+ +Y++ G ++DA+ +FD + N VS N++IAG+A+
Sbjct: 183 LHGFCVKCGFDSN-VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 415 IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMM----KDMFGFEPE 470
+AL LF+ ML P++ ++ S+ AC+ TG + +G+ + M + + F
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG- 300
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
+ ++D+ ++G + DA ++ F +L + V + L Y
Sbjct: 301 ----NTLLDMYAKSGSIHDARKI------------------FDRLAKRDVVSWNSLLTAY 338
Query: 531 AASGKWEEVATIRRLMRDRGVQ 552
A G +E MR G++
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIR 360
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 12 RRDLVTGKSLHALYLKNLVPFSA-----------YLSNHFIL-------LYSKCGCLSAA 53
+RD VT +L + Y ++ P A Y N F L + GC
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 54 HHAF--NQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGD 111
H F +NV + LL Y R + A+ +FD + + VS+N LI+ +A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNS 169
TE AL LF+ M F F+ + L A S+ L K +H I G A N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
LL Y+++G + +A+++F + + +D VSWNS++ AY QH G EA+ F+EM + +
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
+ + S+LTA + L G ++ + K G + ++DL + +GD+ ++
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR-AGDLNRALRF 420
Query: 290 FEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDD 334
EE+P +P +W +++ + + LG + + PDD
Sbjct: 421 IEEMPIEPTAAIWKALLNACRM---HKNTELGAYAAEHVFELDPDD 463
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
++ + C L GK +HA +K+ A+ N + +Y+K G + A F++
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP----QPDLVSYNTLISAYADCGDTESAL 116
+V S+N LL AYA+ A F+++ +P+ +S+ ++++A + G +
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 117 SLFKDMRE 124
++ M++
Sbjct: 384 HYYELMKK 391
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/639 (35%), Positives = 354/639 (55%), Gaps = 36/639 (5%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
LL YA+ I +A F + ++V +N ++ AY D ++ +F+ M+ + +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 131 GFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ +L L +Q+H I F A V + L+ Y++ G LD A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
KD VSW +M+ Y Q+ +AL F++M+ + D L + ++A L+ L
Sbjct: 550 RFAG-KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q HA SGF + + L+ LY++C G + + FE+ D + WN ++SG+
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRC-GKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 309 SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSN 367
Q +++AL F ++NR G ++ +F + A S + GKQ+HA+ K S
Sbjct: 668 QQSGN-NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS- 725
Query: 368 RISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWML 427
V NAL++MY+KCG++ DA + F + N VS N++I Y++HG G EAL F+ M+
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 428 ETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKL 487
+N+ P ++T V VLSAC+H G V +G YF M +G P+ EHY C++D+L RAG L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 488 TDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIY 530
+ A+ I+ MP P ++ + AA+H L+LEP ++ YV+L+N+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 531 AASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMS 590
A S KW+ R+ M+++GV+K+PG SWIEVK +H F D +HP+ EIH Y ++++
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 591 RKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICG 638
++ + GYV D K+ + HSEKLA++FGLLS PI VMKNLR+C
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025
Query: 639 DCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
DCH IKF+S ++ REI VRD YRFH F+ G CSC DYW
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 253/536 (47%), Gaps = 57/536 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F VL C L G+ LH L LK Y+ N + LY G L +A H
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH------ 344
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
+F + Q D V+YNTLI+ + CG E A+ LFK
Sbjct: 345 -------------------------IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 122 MREKRFDTDGFTLSGLITASSNNLCLIK--QLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M + D TL+ L+ A S + L + QLH GF + +LL Y++
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
++ A F E E+++ V WN M+VAYG + + ++F++M ++ + YT SIL
Sbjct: 440 IETALDYFLET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
L DL G Q H+ +IK+ F N+++ S LID+YAK G + + D+V
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL-GKLDTAWDILIRFAGKDVV 557
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
W TMI+GY+Q + D+AL F+++ G D+ +SAC+ L G+QIHA
Sbjct: 558 SWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGME 418
+ S+ + NALV +YS+CG +E++ F++ + ++ N++++G+ Q G E
Sbjct: 617 AC-VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 419 ALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMI 478
ALR+F M I N TF S + A + T + +G++ +++ G++ E E + +I
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALI 734
Query: 479 DLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASG 534
+ + G ++DAE+ FL++ N V + + N Y+ G
Sbjct: 735 SMYAKCGSISDAEK------------------QFLEVSTKNEVSWNAIINAYSKHG 772
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 223/473 (47%), Gaps = 27/473 (5%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--- 140
A ++FD++P+ + ++N +I A LF M + + T SG++ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 141 SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWN 200
S +++Q+H +Y G V N L+ YSRNGF+D A+RVF + +KD SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWV 257
Query: 201 SMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKS 260
+M+ ++ EA++LF +M L + Y +S+L+A +E L G Q H ++K
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 261 GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALG 320
GF ++++ + L+ LY G++ +F + Q D V +NT+I+G SQ Y ++A+
Sbjct: 318 GFSSDTYVCNALVSLYFHL-GNLISAEHIFSNMSQRDAVTYNTLINGLSQC-GYGEKAME 375
Query: 321 CFKKLNRVGYHPDDCSFVCVISACS-NLSPSLGKQIHALTIKIEIRSNRISVNNALVAMY 379
FK+++ G PD + ++ ACS + + G+Q+HA T K+ SN + AL+ +Y
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN-KIEGALLNLY 434
Query: 380 SKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFV 439
+KC ++E A F N V N M+ Y + R+F M I P T+
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
S+L C G + G++ S + F+ S +ID+ + GKL A ++
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL----- 548
Query: 500 NPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
++ + V + + Y ++ T R M DRG++
Sbjct: 549 -------------IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 263/573 (45%), Gaps = 43/573 (7%)
Query: 69 NVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFD 128
N L+ Y+R + AR++FD + D S+ +IS + A+ LF DM
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 129 TDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRV 186
+ S +++A +L + +QLH L + GF V N+L++ Y G L A+ +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 187 FYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLED 246
F M + +D V++N+++ Q G +A++LF+ M L D TLAS++ A ++
Sbjct: 346 FSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
L G Q HA+ K GF N+ I L++LYAKC+ D+ + F E ++VLWN M+
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA-DIETALDYFLETEVENVVLWNVMLV 463
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y ++ + + F+++ P+ ++ ++ C L LG+QIH+ IK +
Sbjct: 464 AYGLLDDLRN-SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N V + L+ MY+K G L+ A + R + VS +MIAGY Q+ +AL F
Sbjct: 523 LNAY-VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
ML+ I + + +SACA + EGQ+ + + GF + + ++ L R G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCG 640
Query: 486 KLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRL 545
K+ ++ E Q E + + + L + + SG EE +
Sbjct: 641 KIEESYLAFE------------------QTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 546 MRDRGVQKKPGFSW------------IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKM 593
M G+ F++ ++ KQ+H + + G + E+ N L M K
Sbjct: 683 MNREGIDNN-NFTFGSAVKAASETANMKQGKQVHAVITKTG-YDSETEVCNALISMYAK- 739
Query: 594 KQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGE 626
G + D EK+ + S K V++ + +Y +
Sbjct: 740 --CGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 190/414 (45%), Gaps = 42/414 (10%)
Query: 149 KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
++LH + G D ++ L Y G L A +VF EM E + +WN M+
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKELAS 163
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASIL-------TAFTSLEDLVGGLQFHAHLIKSG 261
E LF MVS + + T + +L AF +E Q HA ++ G
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE------QIHARILYQG 217
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
++ + + LIDLY++ +G + +VF+ + D W MISG S K E +A+
Sbjct: 218 LRDSTVVCNPLIDLYSR-NGFVDLARRVFDGLRLKDHSSWVAMISGLS-KNECEAEAIRL 275
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
F + +G P +F V+SAC + S +G+Q+H L +K+ S+ V NALV++Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY-VCNALVSLYF 334
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
GNL A +F M + + V+ N++I G +Q G G +A+ LF+ M + P + T S
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
++ AC+ G + GQ+ + + GF + +++L + +
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE------------ 441
Query: 501 PGSIALKAANHFLQLEPSNAVPY-VMLANIYAASGKWEEVATIRRLMRDRGVQK 553
A ++FL+ E N V + VML A G +++ R+ R +++
Sbjct: 442 ------TALDYFLETEVENVVLWNVML----VAYGLLDDLRNSFRIFRQMQIEE 485
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +K ++ GK +HA+ K + N I +Y+KCG +S A F +
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
N S+N ++ AY++ + A FDQ+ +P+ V+ ++SA + G + +
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
+ F+ M + GL + +C++ L +R
Sbjct: 814 AYFESMNSEY---------GLSPKPEHYVCVVDML-----------------------TR 841
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHR 210
G L AK EM D + W +++ A H+
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 252/724 (34%), Positives = 385/724 (53%), Gaps = 89/724 (12%)
Query: 40 FILLYSKCGCLSAAH-----HAFNQTQH--ANVFSFNVLLAAYARQLRIASARQLFDQIP 92
F ++ CG +S+ HA + +NVF N L+A Y+R ++ AR++FD++
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTDGFTLSGLIT--ASSNNLCLIK 149
D+VS+N++I +YA G + AL +F M E D TL ++ AS L K
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQH 209
QLHC A+ V N L+ Y++ G +DEA VF M +KD VSWN+MV Y Q
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVSWNAMVAGYSQI 308
Query: 210 REGLEALQLFQEMVSLQLGLDMYT-----------------------------------L 234
+A++LF++M ++ +D+ T L
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIK-------SGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
S+L+ S+ L+ G + H + IK +G + + + LID+YAKC +
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK-KVDTAR 427
Query: 288 KVFEEIP--QPDLVLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISA 343
+F+ + + D+V W MI GYSQ + +++AL ++ P+ + C + A
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGD-ANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 344 CSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
C++L+ +GKQIHA ++ + + + V+N L+ MY+KCG++ DAR +FD M N V+
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMK 462
S++ GY HG G EAL +F+ M +T + VL AC+H+G + +G +YF+ MK
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK 507
+FG P EHY+C++DLLGRAG+L A RLIE MP P G + L
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 508 --AANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
AA +L ++ Y +L+N+YA +G+W++V IR LMR +GV+K+PG SW+E K
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKG 726
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKL 613
F D +HP KEI+ L + +++K GYVP +K+ L HSEKL
Sbjct: 727 TTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKL 786
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+A+G+L+T G I + KNLR+CGDCH A ++S I +I +RD+ RFH FK+G CSC
Sbjct: 787 ALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846
Query: 674 GDYW 677
YW
Sbjct: 847 KGYW 850
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 245/551 (44%), Gaps = 82/551 (14%)
Query: 62 HANVFSFNVL--------LAAYARQLRIASARQLFDQIPQPD--LVSYNTLISAYADCGD 111
H + SF +L ++ Y ++ A L + P D + +N+LI +Y D G
Sbjct: 48 HQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGC 107
Query: 112 TESALSLFKDMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNS 169
L LF M + D +T + A +++ + H L++ GF V N+
Sbjct: 108 ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNA 167
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
L+ YSR L +A++VF EM + D VSWNS++ +Y + + AL++F M + + G
Sbjct: 168 LVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN-EFGC 225
Query: 230 --DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
D TL ++L SL G Q H + S QN +G+ L+D+YAKC G M +
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC-GMMDEAN 284
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSD------------------------------- 316
VF + D+V WN M++GYSQ + D
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 317 ---QALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHALTIK--IEIRSN--- 367
+ALG +++ G P++ + + V+S C+++ + GK+IH IK I++R N
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 368 -RISVNNALVAMYSKCGNLEDARRLFDRMP--EHNTVSLNSMIAGYAQHGIGMEALRLFE 424
V N L+ MY+KC ++ AR +FD + E + V+ MI GY+QHG +AL L
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 425 WMLETN--IPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEPEGEHYSCMIDLL 481
M E + P T L ACA + G++ + +++ P +C+ID+
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMY 523
Query: 482 GRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVAT 541
+ G ++DA RL+ F + N V + L Y G EE
Sbjct: 524 AKCGSISDA-RLV-----------------FDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 542 IRRLMRDRGVQ 552
I MR G +
Sbjct: 566 IFDEMRRIGFK 576
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 211/485 (43%), Gaps = 82/485 (16%)
Query: 199 WNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLI 258
WNS++ +YG + + L LF M SL D YT + A + + G HA +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 259 KSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQA 318
+GF N +G+ L+ +Y++C + D KVF+E+ D+V WN++I Y+ K A
Sbjct: 155 VTGFISNVFVGNALVAMYSRCR-SLSDARKVFDEMSVWDVVSWNSIIESYA-KLGKPKVA 212
Query: 319 LGCFKKL-NRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALV 376
L F ++ N G PD+ + V V+ C++L + SLGKQ+H + E+ N + V N LV
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN-MFVGNCLV 271
Query: 377 AMYSKC-------------------------------GNLEDARRLFDRMPEH----NTV 401
MY+KC G EDA RLF++M E + V
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 402 SLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQ------ 455
+ ++ I+GYAQ G+G EAL + ML + I P +T +SVLS CA G + G+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 456 -KY-FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFL 513
KY + K+ G E + +ID+ + K+ A + ++ L
Sbjct: 392 IKYPIDLRKN--GHGDENMVINQLIDMYAKCKKVDTARAMFDS----------------L 433
Query: 514 QLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKP-------------GFSWI 560
+ + V + ++ Y+ G + + M + Q +P + +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 561 EVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLL 620
+ KQ+H + + + + + N L +M K G + D + K V + L
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK---CGSISDARLVFDNMMAKNEVTWTSL 550
Query: 621 STSYG 625
T YG
Sbjct: 551 MTGYG 555
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 341 ISACSNLSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--EH 398
I C +S K IH + I + +++ + L++ Y G L A L R P +
Sbjct: 35 IHKCKTISQV--KLIHQKLLSFGILT--LNLTSHLISTYISVGCLSHAVSLLRRFPPSDA 90
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
NS+I Y +G + L LF M + P N TF V AC V G+
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ + + GF + ++ + R L+DA ++ + M
Sbjct: 151 A-LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/636 (36%), Positives = 361/636 (56%), Gaps = 47/636 (7%)
Query: 83 SARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASS 142
+A ++FD++ + ++V++ +I+ G A+ F DM F++D FTLS + +A +
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 143 N--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR---NGFLDEAKRVFYEMGEIKDEV 197
NL L KQLH AI G V SL+ Y++ +G +D+ ++VF M E +
Sbjct: 281 ELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVM 337
Query: 198 SWNSMVVAYGQH-REGLEALQLFQEMVSL-QLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
SW +++ Y ++ EA+ LF EM++ + + +T +S A +L D G Q
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
K G NS + + +I ++ K S M D + FE + + +LV +NT + G + +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVK-SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF- 455
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNA 374
+QA ++ +F ++S +N+ S G+QIH+ +K+ + N+ V NA
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ-PVCNA 514
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
L++MYSKCG+++ A R+F+ M N +S SMI G+A+HG + L F M+E + P
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+T+V++LSAC+H G V+EG ++F+ M + +P+ EHY+CM+DLL RAG LTDA I
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 495 EAMPFNPGSIALK-----------------AANHFLQLEPSNAVPYVMLANIYAASGKWE 537
MPF + + AA L+L+P+ Y+ L+NIYA +GKWE
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWE 694
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
E +RR M++R + K+ G SWIEV ++H F D +HP +I++ L+ + ++K+ G
Sbjct: 695 ESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754
Query: 598 YVPDKE----------------KRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCH 641
YVPD + + L HSEK+AVAFGL+STS P+ V KNLR+CGDCH
Sbjct: 755 YVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCH 814
Query: 642 NAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NA+K+IS ++GREI +RD RFH FKDG+CSC DYW
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 241/506 (47%), Gaps = 43/506 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK+C+ RD GK +HA ++ + + L N I LYSK G + A F
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ + + D+VS++ +++ Y + G A+ +F
Sbjct: 124 R----------------------------RFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYAS---VNNSLLTCYSR- 176
+ E + + + +I A SN+ + L H+ S V SL+ + +
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 177 -NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
N F + A +VF +M E+ + V+W M+ Q EA++ F +MV D +TL+
Sbjct: 216 ENSF-ENAYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD--MRDCMKVFEEI 293
S+ +A LE+L G Q H+ I+SG + + L+D+YAKCS D + DC KVF+ +
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGY-HPDDCSFVCVISACSNLS-PSL 351
++ W +I+GY + + +A+ F ++ G+ P+ +F AC NLS P +
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
GKQ+ K + SN SV N++++M+ K +EDA+R F+ + E N VS N+ + G
Sbjct: 392 GKQVLGQAFKRGLASNS-SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 412 QHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEG 471
++ +A +L + E + + TF S+LS A+ G + +G++ S + + G
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQ 509
Query: 472 EHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +I + + G + A R+ M
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFM 535
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 38 NHFIL--LYSKCGCLSAAH-------HAFNQTQHANVFSFNVLLAAYARQLRIASARQLF 88
NHF + CG LS AF + +N N +++ + + R+ A++ F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 89 DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI 148
+ + + +LVSYNT + + E A L ++ E+ FT + L++ +N +
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 149 K--QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 206
K Q+H + G V N+L++ YS+ G +D A RVF M E ++ +SW SM+ +
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM-ENRNVISWTSMITGF 550
Query: 207 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQ-----FHAHLIKSG 261
+H + L+ F +M+ + + T +IL+A + + + G + + H IK
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDLVLWNTMI 305
+ ++DL + +G + D + +P Q D+++W T +
Sbjct: 611 MEHY----ACMVDLLCR-AGLLTDAFEFINTMPFQADVLVWRTFL 650
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
+D T +S+L + D G HA LI+ +S + + LI LY+K SGD
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK-SGDSAKAED 118
Query: 289 VFEEIP---QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
VFE + + D+V W+ M++ Y D A+ F + +G P+D + VI ACS
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELD-AIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 346 NLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGN-LEDARRLFDRMPEHNTVSL 403
N +G+ +K + + V +L+ M+ K N E+A ++FD+M E N V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 404 NSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS 459
MI Q G EA+R F M+ + T SV SACA ++ G++ S
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 318 ALGCFKKLNRVGYHP-DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNAL 375
A+ + R G P D +F ++ +C LGK +HA I+ +I + + + N+L
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-LYNSL 103
Query: 376 VAMYSKCGNLEDARRLFD---RMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIP 432
+++YSK G+ A +F+ R + + VS ++M+A Y +G ++A+++F LE +
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 433 PTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
P + + +V+ AC+++ V G+ + FE +
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +L + G+ +H+ +K + + + N I +YSKCG + A FN
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 61 QHANVFSFNVLLAAYARQ---LRIASA-RQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
++ NV S+ ++ +A+ +R+ Q+ ++ +P+ V+Y ++SA + G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 117 SLFKDMRE 124
F M E
Sbjct: 596 RHFNSMYE 603
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM-IAGYAQHGIGMEALRLFE 424
SNRI+V + L+ + G+L A D M ++S+ + + I RL +
Sbjct: 23 SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82
Query: 425 W----MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDL 480
++E +I P ++ + S++S + +G A+ + F M+ FG + + +S M+
Sbjct: 83 LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR-RFG-KRDVVSWSAMMAC 140
Query: 481 LGRAGKLTDA 490
G G+ DA
Sbjct: 141 YGNNGRELDA 150
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/671 (35%), Positives = 372/671 (55%), Gaps = 68/671 (10%)
Query: 72 LAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM-REKRFDTD 130
+AA + + AR++FD+IP+P+ ++NTLI AYA D ++ F DM E + +
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T LI A++ ++L L + LH +A+ V NSL+ CY G LD A +VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLV 248
+ E KD VSWNSM+ + Q +AL+LF++M S + T+ +L+A + +L
Sbjct: 191 TIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 249 GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGY 308
G Q +++ ++ + N + + ++D+Y KC G + D ++F+ + + D V W TM+ GY
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKC-GSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 309 SQKEEYS------------------------------DQALGCFKKLN-RVGYHPDDCSF 337
+ E+Y ++AL F +L + + +
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 338 VCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
V +SAC+ + LG+ IH+ K IR N V +AL+ MYSKCG+LE +R +F+ +
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ + ++MI G A HG G EA+ +F M E N+ P +TF +V AC+HTG V E +
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS------------- 503
F M+ +G PE +HY+C++D+LGR+G L A + IEAMP P +
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 504 ----IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSW 559
+A A L+LEP N +V+L+NIYA GKWE V+ +R+ MR G++K+PG S
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
Query: 560 IEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD-------------KEKRL 606
IE+ +H F++ D +HPM ++++ L E+ K+K GY P+ KE+ L
Sbjct: 608 IEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSL 667
Query: 607 VHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCF 666
HSEKLA+ +GL+ST + I V+KNLR+CGDCH+ K IS + REI VRD YRFH F
Sbjct: 668 NLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHF 727
Query: 667 KDGRCSCGDYW 677
++G+CSC D+W
Sbjct: 728 RNGQCSCNDFW 738
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/692 (35%), Positives = 373/692 (53%), Gaps = 72/692 (10%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
H F +TQ + S +++++ Y + A LF + P ++++ ++I + D
Sbjct: 28 HAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFS 87
Query: 114 SALSLFKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLL 171
AL+ F +MR D ++ + + +L + +H + G D N+L+
Sbjct: 88 KALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALM 147
Query: 172 TCYSR-----------NGF-------------------------LDEAKRVFYEMGEIKD 195
Y++ N F +D +RVF M KD
Sbjct: 148 NMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR-KD 206
Query: 196 EVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHA 255
VS+N+++ Y Q +AL++ +EM + L D +TL+S+L F+ D++ G + H
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 256 HLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYS 315
++I+ G + +IGS L+D+YAK S + D +VF + D + WN++++GY Q Y
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAK-SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY- 324
Query: 316 DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNA 374
++AL F+++ P +F VI AC++L+ LGKQ+H ++ SN I + +A
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN-IFIASA 383
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
LV MYSKCGN++ AR++FDRM + VS ++I G+A HG G EA+ LFE M + P
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
+ FV+VL+AC+H G V E YF+ M ++G E EHY+ + DLLGRAGKL +A I
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 495 EAMPFNP-GSI----------------ALKAANHFLQLEPSNAVPYVMLANIYAASGKWE 537
M P GS+ A K A ++ N YV++ N+YA++G+W+
Sbjct: 504 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 563
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
E+A +R MR +G++KKP SWIE+K + H FV+ D SHP + +I+ +L+ + +M++ G
Sbjct: 564 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 623
Query: 598 YVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV D K + L HSE+LAVAFG+++T G I V KN+RIC DCH AIK
Sbjct: 624 YVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIK 683
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
FIS I REI VRD RFH F G CSCGDYW
Sbjct: 684 FISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 13/416 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKC---GCLSAAHHAF 57
F VLK+C DL G+S+H ++ + Y N + +Y+K G + + F
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF 166
Query: 58 NQ--TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
++ + +N +V I S R++F+ +P+ D+VSYNT+I+ YA G E A
Sbjct: 167 DEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDA 226
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTC 173
L + ++M D FTLS ++ S + +I K++H I G D + +SL+
Sbjct: 227 LRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDM 286
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYT 233
Y+++ +++++RVF + +D +SWNS+V Y Q+ EAL+LF++MV+ ++
Sbjct: 287 YAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
+S++ A L L G Q H ++++ GF N I S L+D+Y+KC G+++ K+F+ +
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC-GNIKAARKIFDRM 404
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN--LSPSL 351
D V W +I G++ + +A+ F+++ R G P+ +FV V++ACS+ L
Sbjct: 405 NVLDEVSWTAIIMGHAL-HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+++T K+ + + A+ + + G LE+A +M T S+ S +
Sbjct: 464 WGYFNSMT-KVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/711 (34%), Positives = 385/711 (54%), Gaps = 76/711 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C R ++ G +H L LK + Y++ I LYS
Sbjct: 155 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS--------------- 196
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
R + +AR LFD++P D+ S+N +IS Y G+ + AL+L
Sbjct: 197 ----------------RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 121 DMREKRFDTDGFTLSGLITA--SSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+R D T+ L++A + + +H +I G + V+N L+ Y+ G
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L + ++VF M ++D +SWNS++ AY + + L A+ LFQEM ++ D TL S+
Sbjct: 297 RLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 239 TAFTSLEDLVGGLQFHAHLIKSG-FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
+ + L D+ ++ G F ++ IG+ ++ +YAK G + VF +P D
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL-GLVDSARAVFNWLPNTD 414
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHPDDCSFVCVISACSNLSP-SLGKQI 355
++ WNT+ISGY+Q ++ +A+ + + G + ++V V+ ACS G ++
Sbjct: 415 VISWNTIISGYAQNG-FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H +K + + + V +L MY KCG LEDA LF ++P N+V N++IA + HG
Sbjct: 474 HGRLLKNGLYLD-VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G +A+ LF+ ML+ + P +ITFV++LSAC+H+G V EGQ F MM+ +G P +HY
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIALK--AANHFLQLEPS 518
CM+D+ GRAG+L A + I++M P G++ L A+ H ++EP
Sbjct: 593 CMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
+ +V+L+N+YA++GKWE V IR + +G++K PG+S +EV ++ VF + +HPM
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPM 712
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
+E++ L + K+K GYVPD KE L+ HSE+LA+AF L++T
Sbjct: 713 YEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKT 772
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I + KNLR+CGDCH+ KFIS I REI VRD+ RFH FK+G CSCGDYW
Sbjct: 773 TIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 243/508 (47%), Gaps = 34/508 (6%)
Query: 49 CLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYAD 108
CL A Q Q NV L+ Y +A AR FD I D+ ++N +IS Y
Sbjct: 72 CLHARLVVSKQIQ--NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 109 CGDTESALSLFK-DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
G++ + F M D T ++ A + ++HCLA+ GF V
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA-CRTVIDGNKIHCLALKFGFMWDVYVA 188
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
SL+ YSR + A+ +F EM ++D SWN+M+ Y Q EAL L + +
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEM-PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA--- 244
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+D T+ S+L+A T D G+ H++ IK G + + LIDLYA+ G +RDC
Sbjct: 245 -MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE-FGRLRDCQ 302
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
KVF+ + DL+ WN++I Y E+ +A+ F+++ PD + + + S S L
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQ-PLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 348 SPSLG-KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + T++ I++ NA+V MY+K G ++ AR +F+ +P + +S N++
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 407 IAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQK-YFSMMKDM 464
I+GYAQ+G EA+ ++ M E I T+VSVL AC+ G + +G K + ++K+
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN- 480
Query: 465 FGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYV 524
G + + + D+ G+ G+L DA L F Q+ N+VP+
Sbjct: 481 -GLYLDVFVVTSLADMYGKCGRLEDALSL------------------FYQIPRVNSVPWN 521
Query: 525 MLANIYAASGKWEEVATIRRLMRDRGVQ 552
L + G E+ + + M D GV+
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
T F +L HA L+ S QN I + L++LY G++ F+ I D+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL-GNVALARHTFDHIQNRDV 117
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKK-LNRVGYHPDDCSFVCVISACSNLSPSLGKQIHA 357
WN MISGY + S + + CF + G PD +F V+ AC + G +IH
Sbjct: 118 YAWNLMISGYGRAGN-SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID--GNKIHC 174
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
L +K + + V +L+ +YS+ + +AR LFD MP + S N+MI+GY Q G
Sbjct: 175 LALKFGFMWD-VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
EAL L + + ++T VS+LSAC G G S G E E + +
Sbjct: 234 EALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHS-YSIKHGLESELFVSNKL 288
Query: 478 IDLLGRAGKLTDAERLIEAM 497
IDL G+L D +++ + M
Sbjct: 289 IDLYAEFGRLRDCQKVFDRM 308
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/615 (36%), Positives = 347/615 (56%), Gaps = 72/615 (11%)
Query: 94 PDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHC 153
P +V +N L+ YA CG A +F +M + +LC
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEM------------------PNRDLCSW----- 154
Query: 154 LAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGL 213
N ++ Y+ G L+EA+++F EM E KD SW +MV Y + +
Sbjct: 155 --------------NVMVNGYAEVGLLEEARKLFDEMTE-KDSYSWTAMVTGYVKKDQPE 199
Query: 214 EALQLFQEMVSLQLGL-DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL L+ M + +++T++ + A +++ + G + H H++++G + + S L
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
+D+Y KC G + + +F++I + D+V W +MI Y + + + F +L P
Sbjct: 260 MDMYGKC-GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR-EGFSLFSELVGSCERP 317
Query: 333 DDCSFVCVISACSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
++ +F V++AC++L+ LGKQ+H ++ + +++LV MY+KCGN+E A+ +
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA-SSSLVDMYTKCGNIESAKHV 376
Query: 392 FDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKV 451
D P+ + VS S+I G AQ+G EAL+ F+ +L++ P ++TFV+VLSAC H G V
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 452 AEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNP---------- 501
+G ++F + + +HY+C++DLL R+G+ + +I MP P
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 502 -----GSIAL--KAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKK 554
G+I L +AA ++EP N V YV +ANIYAA+GKWEE +R+ M++ GV K+
Sbjct: 497 GCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Query: 555 PGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DK 602
PG SW E+K++ HVF+A D SHPM +I +L E+ +KMK+ GYVP K
Sbjct: 557 PGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQK 616
Query: 603 EKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYR 662
E+ LV+HSEKLAVAF +LST G I V KNLR C DCH AIKFIS I R+ITVRD+ R
Sbjct: 617 EENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTR 676
Query: 663 FHCFKDGRCSCGDYW 677
FHCF++G+CSCGDYW
Sbjct: 677 FHCFENGQCSCGDYW 691
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 332 PDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
P ++ +I CS GK++H I+ I + N L+ MY+KCG+L DAR+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHE-HIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
+FD MP + S N M+ GYA+ G+ EA +LF+ M E + + ++ ++++ +
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD----SYSWTAMVTGYVKKDQ 197
Query: 451 VAEGQKYFSMMKDMFGFEP 469
E +S+M+ + P
Sbjct: 198 PEEALVLYSLMQRVPNSRP 216
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G + LR +L P T+ +++ C+ T + EG+K ++ GF P ++
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS-GFVPGIVIWN 124
Query: 476 CMIDLLGRAGKLTDAERLIEAMP 498
++ + + G L DA ++ + MP
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMP 147
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/540 (39%), Positives = 318/540 (58%), Gaps = 39/540 (7%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ Y + L++A ++F +M + ++ +SW +M+ AY + + +AL+L M+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
++YT +S+L + + D+ H +IK G + + S LID++AK G+ D +
Sbjct: 159 RPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL-GEPEDAL 214
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
VF+E+ D ++WN++I G++Q SD AL FK++ R G+ + + V+ AC+ L
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ LG Q H +K + + +NNALV MY KCG+LEDA R+F++M E + ++ ++M
Sbjct: 274 ALLELGMQAHVHIVKYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G AQ+G EAL+LFE M + P IT V VL AC+H G + +G YF MK ++G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AA 509
+P EHY CMIDLLG+AGKL DA +L+ M P ++ + AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+ L+P +A Y +L+NIYA S KW+ V IR MRDRG++K+PG SWIEV KQ+H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPDK------------EKRLVHHSEKLAVAF 617
+ D SHP I E+ L ++ ++ GYVP+ E L HHSEKLA+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL++ + I + KNLRICGDCH K S + R I +RD R+H F+DG+CSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 190/364 (52%), Gaps = 9/364 (2%)
Query: 48 GCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYA 107
G L H FN +F NVL+ Y + + A QLFDQ+PQ +++S+ T+ISAY+
Sbjct: 80 GNLICRHLYFN-GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 108 DCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN 167
C + AL L M + +T S ++ S N + ++ LHC I G + V
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCNGMSDVRMLHCGIIKEGLESDVFVR 197
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
++L+ +++ G ++A VF EM D + WNS++ + Q+ AL+LF+ M
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+ TL S+L A T L L G+Q H H++K + Q+ + + L+D+Y KC G + D +
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC-GSLEDAL 313
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VF ++ + D++ W+TMISG +Q YS +AL F+++ G P+ + V V+ ACS+
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 348 SPSLGKQIHALTIKIEIRSNRISVN-NALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNS 405
+ ++K + + + ++ + K G L+DA +L + M E + V+ +
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 406 MIAG 409
++
Sbjct: 433 LLGA 436
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 48/234 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL+ C G L G H +K L+N + +Y KCG L A FNQ
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ +V ++++T+IS A G ++ AL LF+
Sbjct: 320 KERDV-------------------------------ITWSTMISGLAQNGYSQEALKLFE 348
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCL---------IKQLHCLAIYCGFDHYASVNNSLL 171
M+ + T+ G++ A S+ L +K+L+ G D ++
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY------GIDPVREHYGCMI 402
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ G LD+A ++ EM D V+W +++ A R + A +++++L
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/661 (35%), Positives = 356/661 (53%), Gaps = 47/661 (7%)
Query: 50 LSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADC 109
+ A FNQ +V + ++ Y R R+ A LFD++P D+VS+N++IS +C
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 110 GDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNS 169
GD +A+ LF +M E+ + ++G + + Q L A+ N S
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGK-----VDQAERLFYQMPVKDTAAWN-S 164
Query: 170 LLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ Y + G +D+A ++F +M K+ +SW +M+ Q+ EAL LF+ M+ +
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPG-KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKS 223
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS--GDMRDCM 287
++TA + G+Q H +IK GF ++ + LI YA C GD R
Sbjct: 224 TSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR--- 280
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
KVF+E + +W ++SGYS +++ D AL F + R P+ +F +++CS L
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHED-ALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 348 SP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
GK++H + +K+ + ++ V N+LV MYS GN+ DA +F ++ + + VS NS+
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAF-VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSI 398
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I G AQHG G A +F M+ N P ITF +LSAC+H G + +G+K F M
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN 458
Query: 467 -FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KA 508
+ + +HY+CM+D+LGR GKL +AE LIE M P + KA
Sbjct: 459 HIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKA 518
Query: 509 ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHV 568
A L+ ++ YV+L+NIYA++G+W V+ +R M+ G+ KKPG SW+ ++ + H
Sbjct: 519 AAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHE 578
Query: 569 FVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVA 616
F + G P I+ LE + K+K+ GY PD KE+ L +HSE+LA+A
Sbjct: 579 FFS--GDQPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIA 636
Query: 617 FGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDY 676
FGL++T G + VMKNLR+C DCH IK IS + GREI +RD RFH FK+G CSCGDY
Sbjct: 637 FGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDY 696
Query: 677 W 677
W
Sbjct: 697 W 697
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 159/373 (42%), Gaps = 44/373 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F V+ C G +H L +K + Y+S I Y+ C + + F++
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
H V + LL+ Y+ + E ALS+F
Sbjct: 288 HEQVAVWTALLSGYSLNKK-------------------------------HEDALSIFSG 316
Query: 122 M-REKRFDTDGFTLSGLITASS-NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M R SGL + S+ L K++H +A+ G + A V NSL+ YS +G
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
+++A VF ++ + K VSWNS++V QH G A +F +M+ L D T +L+
Sbjct: 377 VNDAVSVFIKIFK-KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEE-IPQP 296
A + L G + ++ H + I + ++D+ +C G +++ ++ E + +P
Sbjct: 436 ACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRC-GKLKEAEELIERMVVKP 494
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
+ ++W ++S +SD G +K ++ D S + SN+ S G+ +
Sbjct: 495 NEMVWLALLSACRM---HSDVDRG--EKAAAAIFNLDSKSSAAYV-LLSNIYASAGRWSN 548
Query: 357 ALTIKIEIRSNRI 369
++++++ N I
Sbjct: 549 VSKLRVKMKKNGI 561
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L +C L GK +H + +K + A++ N +++YS G ++ A F +
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI----PQPDLVSYNTLISAYADCGDTESAL 116
++ S+N ++ A+ R A +F Q+ +PD +++ L+SA + CG E
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 117 SLF 119
LF
Sbjct: 448 KLF 450
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 364/659 (55%), Gaps = 50/659 (7%)
Query: 58 NQTQHANVFSFNVLL--AAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
N H + F N+LL + RQ + + LF P++ YN+LI+ + +
Sbjct: 38 NHHLHHDTFLVNLLLKRTLFFRQTKYSYL--LFSHTQFPNIFLYNSLINGFVNNHLFHET 95
Query: 116 LSLFKDMREKRFDTDGFT----LSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLL 171
L LF +R+ GFT L ASS L + LH L + CGF+H + SLL
Sbjct: 96 LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI--DLHSLVVKCGFNHDVAAMTSLL 153
Query: 172 TCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLG 228
+ YS +G L++A ++F E+ + + V+W ++ Y G+HRE A+ LF++MV + +
Sbjct: 154 SIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHRE---AIDLFKKMVEMGVK 209
Query: 229 LDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMK 288
D Y + +L+A + DL G ++ + +NS + + L++LYAKC G M
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC-GKMEKARS 268
Query: 289 VFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS 348
VF+ + + D+V W+TMI GY+ + + + F ++ + PD S V +S+C++L
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNS-FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 349 P-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
LG+ +L + E +N + + NAL+ MY+KCG + +F M E + V +N+ I
Sbjct: 328 ALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
+G A++G + +F + I P TF+ +L C H G + +G ++F+ + ++
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAA-----------------N 510
+ EHY CM+DL GRAG L DA RLI MP P +I A
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ LEP NA YV L+NIY+ G+W+E A +R +M +G++K PG+SWIE++ ++H F+
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFG 618
A+D SHP+ +I+ LE++ +M+ G+VP +KE+ L +HSEKLAVA G
Sbjct: 567 ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALG 626
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ST +G+ I V+KNLR+CGDCH +K IS I REI VRD RFHCF +G CSC DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 39/309 (12%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
QVL CV DL +G+ + + + ++++ + LY+KCG + A F
Sbjct: 217 QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF------ 270
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
D + + D+V+++T+I YA + + LF M
Sbjct: 271 -------------------------DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 124 EKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
++ D F++ G ++ AS L L + L F + N+L+ Y++ G +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
VF EM E KD V N+ + ++ + +F + L + D T +L
Sbjct: 366 RGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 242 TSLEDLVGGLQFHAHL--IKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QPDL 298
+ GL+F + + + H G ++DL+ + +G + D ++ ++P +P+
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGC-MVDLWGR-AGMLDDAYRLICDMPMRPNA 482
Query: 299 VLWNTMISG 307
++W ++SG
Sbjct: 483 IVWGALLSG 491
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 350/646 (54%), Gaps = 78/646 (12%)
Query: 71 LLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
L+ AYA +ASAR++FD+IP+ +++ N +I +Y + G + +F M D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 GFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFY 188
+T ++ A S + + +++H A G V N L++ Y + GFL EA+ V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 189 EMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF--TSLED 246
EM +D VSWNS+VV Y Q++ +AL++ +EM S+++ D T+AS+L A T+ E+
Sbjct: 200 EMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 247 LVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMIS 306
+ +Y K DM F ++ + LV WN MI
Sbjct: 259 V---------------------------MYVK---DM------FFKMGKKSLVSWNVMIG 282
Query: 307 GYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR 365
Y K +A+ + ++ G+ PD S V+ AC + S SLGK+IH + ++
Sbjct: 283 VY-MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 366 SNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEW 425
N + + NAL+ MY+KCG LE AR +F+ M + VS +MI+ Y G G +A+ LF
Sbjct: 342 PNLL-LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 426 MLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAG 485
+ ++ + P +I FV+ L+AC+H G + EG+ F +M D + P EH +CM+DLLGRAG
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 486 KLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVPYVMLAN 528
K+ +A R I+ M P I L AA+ QL P + YV+L+N
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 529 IYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEE 588
IYA +G+WEEV IR +M+ +G++K PG S +EV + +H F+ D SHP EI+ L+
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 589 MSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGE-----PILVM 631
+ +KMK+ GYVP DKE L HSEKLA+ F L++T E I +
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 632 KNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
KNLRICGDCH A K IS I REI +RDT RFH F+ G CSCGDYW
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 231 MYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
++ L +L + + L H+ +I NS +G L+ YA D+ KVF
Sbjct: 42 VFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLK-DVASARKVF 97
Query: 291 EEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS-NLSP 349
+EIP+ ++++ N MI Y Y + + F + PD +F CV+ ACS + +
Sbjct: 98 DEIPERNVIIINVMIRSYVNNGFYG-EGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI 156
Query: 350 SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAG 409
+G++IH K+ + S+ + V N LV+MY KCG L +AR + D M + VS NS++ G
Sbjct: 157 VIGRKIHGSATKVGL-SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 410 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
YAQ+ +AL + M I T S+L A ++T E Y +KDMF F+
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMY---VKDMF-FKM 269
Query: 470 EGE---HYSCMIDLLGRAGKLTDAERL---IEAMPFNPGSIALKAA------NHFLQL-- 515
+ ++ MI + + +A L +EA F P ++++ + L L
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 516 ------EPSNAVPYVMLAN----IYAASGKWEEVATIRRLMRDRGV 551
E +P ++L N +YA G E+ + M+ R V
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 40/279 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VLK C +V G+ +H K + + ++ N + +Y KCG LS A ++
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 61 QHANVFSFNVLLAAYARQLRIASA------------------------------------ 84
+V S+N L+ YA+ R A
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 85 -RQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITA--S 141
+ +F ++ + LVS+N +I Y A+ L+ M F+ D +++ ++ A
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 142 SNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNS 201
++ L L K++H + N+L+ Y++ G L++A+ VF M +D VSW +
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVVSWTA 380
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
M+ AYG G +A+ LF ++ L D + L A
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 42/229 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHA-LYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
+ VL C L GK +H + K L+P + L N I +Y+KCGCL A F
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQ----PDLVSYNTLISAYADCGDTESA 115
+ +V S+ +++AY R A LF ++ PD +++ T ++A + G E
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
S FK M TD + ++ ++ L C+ G
Sbjct: 430 RSCFKLM------TDHYKITP----------RLEHLACMVDLLG---------------- 457
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG----LEALQLFQ 220
R G + EA R +M +E W +++ A H + L A +LFQ
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/711 (35%), Positives = 364/711 (51%), Gaps = 76/711 (10%)
Query: 5 VLKTCVGRRDLVTGKSLHALYLKNL-VPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
+LK + + G+ +HA +K L P +L+N+ I +YSK H
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSK-------------LDHP 58
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
SAR + P ++VS+ +LIS A G +AL F +MR
Sbjct: 59 E------------------SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 124 EKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
+ + FT A ++ + KQ+H LA+ CG V S Y + D
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 182 EAKRVFYEMGEIKDEVSWNSMV---VAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+A+++F E+ E E +WN+ + V G+ RE +EA F E + + T + L
Sbjct: 161 DARKLFDEIPERNLE-TWNAFISNSVTDGRPREAIEA---FIEFRRIDGHPNSITFCAFL 216
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L G+Q H +++SGF + + +GLID Y KC +R +F E+ +
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK-QIRSSEIIFTEMGTKNA 275
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHA 357
V W ++++ Y Q E ++A + + + D V+SAC+ ++ LG+ IHA
Sbjct: 276 VSWCSLVAAYVQNHE-DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
+K + I V +ALV MY KCG +ED+ + FD MPE N V+ NS+I GYA G
Sbjct: 335 HAVKACVERT-IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 418 EALRLFEWMLETNIPPTN--ITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
AL LFE M PT +TFVS+LSAC+ G V G K F M+ +G EP EHYS
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYS 453
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPS 518
C++D+LGRAG + A I+ MP P + L AA + +L+P
Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ +V+L+N +AA+G+W E T+R ++ G++K G+SWI VK Q+H F A+D SH +
Sbjct: 514 DSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHIL 573
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
KEI L ++ +M+ AGY PD K + HHSEKLA+AFGLLS
Sbjct: 574 NKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSV 633
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI + KNLRICGDCH+ KF+S REI VRD RFH FKDG CSC DYW
Sbjct: 634 PIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 187/412 (45%), Gaps = 47/412 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF K R VTGK +HAL + KCG +
Sbjct: 110 TFPCAFKAVASLRLPVTGKQIHALAV-------------------KCGRI---------- 140
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+VF Y + AR+LFD+IP+ +L ++N IS G A+ F
Sbjct: 141 --LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ R + T + A S+ +L L QLH L + GFD SV N L+ Y +
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+ ++ +F EMG K+ VSW S+V AY Q+ E +A L+ + + ++S+L
Sbjct: 259 QIRSSEIIFTEMG-TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A + L G HAH +K+ + +GS L+D+Y KC G + D + F+E+P+ +L
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC-GCIEDSEQAFDEMPEKNL 376
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKL--NRVGYHPDDCSFVCVISACSNLSPSLGKQIH 356
V N++I GY+ + + D AL F+++ G P+ +FV ++SACS G +
Sbjct: 377 VTRNSLIGGYAHQGQV-DMALALFEEMAPRGCGPTPNYMTFVSLLSACSR----AGAVEN 431
Query: 357 ALTIKIEIRSNRISVNNA-----LVAMYSKCGNLEDARRLFDRMPEHNTVSL 403
+ I +RS A +V M + G +E A +MP T+S+
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 483
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 156/371 (42%), Gaps = 45/371 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF L C L G LH L L++ + N I Y KC
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC------------- 257
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+Q+R S+ +F ++ + VS+ +L++AY + E A L+
Sbjct: 258 ----------------KQIR--SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
R+ +T F +S +++A + L L + +H A+ + V ++L+ Y + G
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG--LDMYTLAS 236
++++++ F EM E K+ V+ NS++ Y + AL LF+EM G + T S
Sbjct: 360 CIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 237 ILTAFTSLEDLVGGLQ-FHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G++ F + G + S ++D+ + +G + + +++P
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR-AGMVERAYEFIKKMPI 477
Query: 295 QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQ 354
QP + +W + + + LG N P D ++ SN + G+
Sbjct: 478 QPTISVWGALQNACRM---HGKPQLGLLAAENLFKLDPKDSGNHVLL---SNTFAAAGRW 531
Query: 355 IHALTIKIEIR 365
A T++ E++
Sbjct: 532 AEANTVREELK 542
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/632 (37%), Positives = 362/632 (57%), Gaps = 44/632 (6%)
Query: 87 LFDQ-IPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNL 145
LF++ + + D+ S+N++I+ A GD+ AL F MR+ + I A S+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 CLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMV 203
+ KQ H A G+ V+++L+ YS G L++A++VF E+ + ++ VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMI 149
Query: 204 VAYGQHREGLEALQLFQEMVSLQ------LGLDMYTLASILTAFTSLEDLVGGLQFHAHL 257
Y + L+A+ LF++++ + + LD L S+++A + + H+ +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 258 IKSGFHQNSHIGSGLIDLYAKCS-GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSD 316
IK GF + +G+ L+D YAK G + K+F++I D V +N+++S Y+Q S+
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSN 268
Query: 317 QALGCFKKL--NRVGYHPDDCSFVCVISACSNLSPSLGKQIHALTIKIEIRSNRISVNNA 374
+A F++L N+V +++ + + +GK IH I++ + + I V +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTS 327
Query: 375 LVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPT 434
++ MY KCG +E AR+ FDRM N S +MIAGY HG +AL LF M+++ + P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 435 NITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
ITFVSVL+AC+H G EG ++F+ MK FG EP EHY CM+DLLGRAG L A LI
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 495 EAMPFNPGSI---ALKAA--------------NHFLQLEPSNAVPYVMLANIYAASGKWE 537
+ M P SI +L AA +L+ SN Y++L++IYA +G+W+
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 538 EVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAG 597
+V +R +M++RG+ K PGFS +E+ ++HVF+ D HP ++I+ +L E++RK+ +AG
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 598 YVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIK 645
YV +KE L HSEKLA+AFG+++T G + V+KNLR+C DCHN IK
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 646 FISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
IS I RE VRD RFH FKDG CSCGDYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 214/437 (48%), Gaps = 29/437 (6%)
Query: 54 HHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTE 113
AF +++F + L+ Y+ ++ AR++FD+IP+ ++VS+ ++I Y G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 114 SALSLFKDMR-EKRFDTDGFTLSGLITASSNNLC-------LIKQLHCLAIYCGFDHYAS 165
A+SLFKD+ ++ D D L + S + C L + +H I GFD S
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 166 VNNSLLTCYSRN--GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV 223
V N+LL Y++ G + A+++F ++ + KD VS+NS++ Y Q EA ++F+ +V
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 224 SLQ-LGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGD 282
+ + + TL+++L A + L G H +I+ G + +G+ +ID+Y KC G
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC-GR 337
Query: 283 MRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVIS 342
+ K F+ + ++ W MI+GY ++ +AL F + G P+ +FV V++
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGM-HGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 343 ACSN--LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHN 399
ACS+ L + +A+ + + + +V + + G L+ A L RM + +
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPG-LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 400 TVSLNSMIAGYAQHG----IGMEALRLFEWMLETNIPPTNITFVSVLSAC-AHTGKVAEG 454
++ +S++A H + RLFE + +N + +LS A G+ +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFE------LDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 455 QKYFSMMKDMFGFEPEG 471
++ +MK+ +P G
Sbjct: 510 ERVRMIMKNRGLVKPPG 526
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 15 LVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAA 74
L GK +H ++ + + I +Y KCG + A AF++ ++ NV S+ ++A
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 75 YARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTD 130
Y A A +LF D +P+ +++ ++++A + G F M+ +
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----- 417
Query: 131 GFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEM 190
+ G +HY + + L R GFL +A + M
Sbjct: 418 -----------------------FGVEPGLEHYGCMVDLL----GRAGFLQKAYDLIQRM 450
Query: 191 GEIKDEVSWNSMVVAYGQHR 210
D + W+S++ A H+
Sbjct: 451 KMKPDSIIWSSLLAACRIHK 470
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/658 (34%), Positives = 366/658 (55%), Gaps = 52/658 (7%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
N+ + N L+ Y + A ++FD +P+ ++VS++ L+S + GD + +LSLF +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 124 EKRFDTDGFTLS------GLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + FT S GL+ A L Q+H + GF+ V NSL+ YS+
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGL----QIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM--VSLQLGLDMYTLA 235
G ++EA++VF + + + +SWN+M+ + G +AL F M +++ D +TL
Sbjct: 156 GRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFH--QNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L A +S + G Q H L++SGFH ++ I L+DLY KC G + K F++I
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC-GYLFSARKAFDQI 273
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLG 352
+ ++ W+++I GY+Q+ E+ +A+G FK+L + D + +I ++ + G
Sbjct: 274 KEKTMISWSSLILGYAQEGEFV-EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
KQ+ AL +K+ SV N++V MY KCG +++A + F M + +S +I GY +
Sbjct: 333 KQMQALAVKLP-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGE 472
HG+G +++R+F ML NI P + +++VLSAC+H+G + EG++ FS + + G +P E
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 473 HYSCMIDLLGRAGKLTDAERLIEAMPFNP---------------GSIAL--KAANHFLQL 515
HY+C++DLLGRAG+L +A+ LI+ MP P G I L + L++
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGS 575
+ N YVM++N+Y +G W E R L +G++K+ G SW+E+++++H F + + S
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 571
Query: 576 HPMIKEIHNYLEEMSRKMKQA-GYV------------PDKEKRLVHHSEKLAVAFGLLS- 621
HP+ I L+E R++++ GYV KE+ L HSEKLA+ L +
Sbjct: 572 HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 631
Query: 622 --TSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G+ I V KNLR+C DCH IK +S I VRD RFH F+DG CSCGDYW
Sbjct: 632 GLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 39/312 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLV--PFSAYLSNHFILLYSKCGCLSAAHHAFN 58
T +LK C + GK +H +++ P SA ++ + LY KCG L +A AF+
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
Q + + S++ L+ YA++ G+ A+ L
Sbjct: 272 QIKEKTMISWSSLILGYAQE-------------------------------GEFVEAMGL 300
Query: 119 FKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR 176
FK ++E D F LS +I ++ L KQ+ LA+ SV NS++ Y +
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G +DEA++ F EM ++KD +SW ++ YG+H G +++++F EM+ + D +
Sbjct: 361 CGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP- 294
+L+A + + G + + L+++ G + ++DL + +G +++ + + +P
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR-AGRLKEAKHLIDTMPI 478
Query: 295 QPDLVLWNTMIS 306
+P++ +W T++S
Sbjct: 479 KPNVGIWQTLLS 490
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 247/757 (32%), Positives = 372/757 (49%), Gaps = 135/757 (17%)
Query: 22 HALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRI 81
HA LK+ Y+S I YS C + A ++SF+ L+ A +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA--- 94
Query: 82 ASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL--IT 139
+LF Q ++ +F M D L L +
Sbjct: 95 ----KLFTQ------------------------SIGVFSRMFSHGLIPDSHVLPNLFKVC 126
Query: 140 ASSNNLCLIKQLHCLAIYCGFDHYASVNNS------------------------------ 169
A + + KQ+HC++ G D A V S
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186
Query: 170 -LLTCYSRNGFLDEAKRVFYEM---GEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
LL Y+R G L+E R+ EM G + VSWN ++ + + EA+ +FQ++ L
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
D T++S+L + E L G H ++IK G ++ + S +ID+Y K SG +
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK-SGHVYG 305
Query: 286 CMKVF-----------------------------------EEIPQPDLVLWNTMISGYSQ 310
+ +F E+ + ++V W ++I+G +Q
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ +AL F+++ G P+ + ++ AC N++ G+ H +++ + N +
Sbjct: 366 NGK-DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-V 423
Query: 370 SVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLET 429
V +AL+ MY+KCG + ++ +F+ MP N V NS++ G++ HG E + +FE ++ T
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 430 NIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTD 489
+ P I+F S+LSAC G EG KYF MM + +G +P EHYSCM++LLGRAGKL +
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 490 AERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVMLANIYAA 532
A LI+ MPF P S +A AA LEP N YV+L+NIYAA
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 533 SGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRK 592
G W EV +IR M G++K PG SWI+VK +++ +A D SHP I +I ++E+S++
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 593 MKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDC 640
M+++G+ P ++E+ L HSEKLAV FGLL+T G P+ V+KNLRICGDC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 641 HNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
H IKFIS+ AGREI +RDT RFH FKDG CSCGD+W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 193/484 (39%), Gaps = 106/484 (21%)
Query: 150 QLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEV--SWNSMVVAYG 207
Q H + G + ++ L+ YS ++A V + I D S++S++ A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLV---LQSIPDPTIYSFSSLIYALT 92
Query: 208 QHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSH 267
+ + +++ +F M S L D + L ++ L G Q H SG ++
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 268 IGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL--------------------------- 300
+ + +Y +C G M D KVF+ + D+V
Sbjct: 153 VQGSMFHMYMRC-GRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 301 --------WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
WN ++SG++ + Y +A+ F+K++ +G+ PD + V+ + + ++
Sbjct: 212 GIEANIVSWNGILSGFN-RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP--------------- 396
G+ IH IK + ++ V +A++ MY K G++ LF++
Sbjct: 271 GRLIHGYVIKQGLLKDK-CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 397 --------------------EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNI 436
E N VS S+IAG AQ+G +EAL LF M + P ++
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 437 TFVSVLSACAHTGKVAEGQKY--FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLI 494
T S+L AC + + G+ F++ + G S +ID+ + G++ ++ +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG---SALIDMYAKCGRINLSQIVF 446
Query: 495 EAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI-RRLMRDRGVQK 553
MP N V + L N ++ GK +EV +I LMR R
Sbjct: 447 NMMP------------------TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR---L 485
Query: 554 KPGF 557
KP F
Sbjct: 486 KPDF 489
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 141/314 (44%), Gaps = 10/314 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL + L G+ +H +K + + + I +Y K G + FNQ
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLF----DQIPQPDLVSYNTLISAYADCGDTESAL 116
+ N + +R + A ++F +Q + ++VS+ ++I+ A G AL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 117 SLFKDMREKRFDTDGFTLSGLITASSNNLCL--IKQLHCLAIYCGFDHYASVNNSLLTCY 174
LF++M+ + T+ ++ A N L + H A+ V ++L+ Y
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMY 433
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
++ G ++ ++ VF M K+ V WNS++ + H + E + +F+ ++ +L D +
Sbjct: 434 AKCGRINLSQIVF-NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S+L+A + G ++ + + G S +++L + +G +++ + +E+
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR-AGKLQEAYDLIKEM 551
Query: 294 P-QPDLVLWNTMIS 306
P +PD +W +++
Sbjct: 552 PFEPDSCVWGALLN 565
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/540 (38%), Positives = 322/540 (59%), Gaps = 34/540 (6%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N L+ YS+ GF++ A++VF M E + VSWN+M+ Y ++R EAL +F EM +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLE-RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGF 158
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+T++S+L+A D + + H +K+ N ++G+ L+DLYAKC G ++D +
Sbjct: 159 KFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC-GMIKDAV 217
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL 347
+VFE + V W++M++GY Q + Y ++AL +++ R+ + + VI ACSNL
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNY-EEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 348 SPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSM 406
+ + GKQ+HA+ K SN + V ++ V MY+KCG+L ++ +F + E N N++
Sbjct: 277 AALIEGKQMHAVICKSGFGSN-VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 407 IAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
I+G+A+H E + LFE M + + P +TF S+LS C HTG V EG+++F +M+ +G
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 395
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAA 509
P HYSCM+D+LGRAG L++A LI+++PF+P + +A AA
Sbjct: 396 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAA 455
Query: 510 NHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVF 569
+LEP NA +V+L+NIYAA+ +WEE+A R+L+RD V+K G SWI++K ++H F
Sbjct: 456 EKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTF 515
Query: 570 VAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAF 617
+ HP I+EI + L+ + K ++ GY P KE+ L+ HSEKLA+ F
Sbjct: 516 SVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 575
Query: 618 GLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
GL+ P+ +MKNLRIC DCH +K S R I VRD RFH F DG CSCGD+W
Sbjct: 576 GLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 37/310 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C D + K LH L +K + + Y+ + LY+KCG + A F
Sbjct: 164 TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
Q + V+++++++ Y + E AL L++
Sbjct: 224 QDKSS-------------------------------VTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+ + + FTLS +I A SN LI KQ+H + GF V +S + Y++ G
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
L E+ +F E+ E E+ WN+++ + +H E + LF++M + + T +S+L
Sbjct: 313 SLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 371
Query: 239 TAFTSLEDLVGGLQFHAHLIKS-GFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIP-QP 296
+ + G +F + + G N S ++D+ + +G + + ++ + IP P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR-AGLLSEAYELIKSIPFDP 430
Query: 297 DLVLWNTMIS 306
+W ++++
Sbjct: 431 TASIWGSLLA 440
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 361/648 (55%), Gaps = 37/648 (5%)
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+N F L+ AY+ + SAR +F+ I D+V + ++S Y + G E +L L M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 123 REKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
R F + +T + AS K +H + + V LL Y++ G +
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+A +VF EM + D V W+ M+ + Q+ EA+ LF M + + +TL+SIL
Sbjct: 299 SDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ G Q H ++K GF + ++ + LID+YAKC M +K+F E+ + V
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE-KMDTAVKLFAELSSKNEVS 416
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
WNT+I GY E +A F++ R + +F + AC++L S LG Q+H L
Sbjct: 417 WNTVIVGYENLGE-GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
IK + +++V+N+L+ MY+KCG+++ A+ +F+ M + S N++I+GY+ HG+G +A
Sbjct: 476 IKTN-NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LR+ + M + + P +TF+ VLS C++ G + +GQ+ F M G EP EHY+CM+
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSI-----------------ALKAANHFLQLEPSNAVP 522
LLGR+G+L A +LIE +P+ P + A ++A L++ P +
Sbjct: 595 LLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT 654
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+++N+YA + +W VA+IR+ M++ GV+K+PG SWIE + +H F HP +K I
Sbjct: 655 YVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLI 714
Query: 583 HNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLST-SYGEPIL 629
+ LE ++ K +AGYVPD K+KRL HSE+LA+A+GL+ S IL
Sbjct: 715 NGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRIL 774
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+MKNLRIC DCH+A+K IS+I R++ +RD RFH F G CSCGD+W
Sbjct: 775 IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 209/468 (44%), Gaps = 39/468 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF LK +G K +H LK + + LY++ G +S A FN
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN-- 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++P+ D+V ++ +I+ + G A+ LF
Sbjct: 307 -----------------------------EMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MRE + FTLS ++ + C L +QLH L + GFD V+N+L+ Y++
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+D A ++F E+ K+EVSWN+++V Y EG +A +F+E + Q+ + T +S L
Sbjct: 398 KMDTAVKLFAELSS-KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SL + G+Q H IK+ + + + LID+YAKC GD++ VF E+ D+
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKC-GDIKFAQSVFNEMETIDV 515
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
WN +ISGYS QAL + P+ +F+ V+S CSN G++
Sbjct: 516 ASWNALISGYST-HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFE 574
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSL-NSMIAGYAQHGIG 416
I+ + +V + + G L+ A +L + +P +V + +M++
Sbjct: 575 SMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNE 634
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDM 464
A R E +L+ N P T+V V + A + A MK+M
Sbjct: 635 EFARRSAEEILKIN-PKDEATYVLVSNMYAGAKQWANVASIRKSMKEM 681
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 32/318 (10%)
Query: 224 SLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDM 283
S+ GLD + ++L D + H ++K G + + L++ Y K D
Sbjct: 42 SIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD- 100
Query: 284 RDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISA 343
+D + +F+E+P+ + V + T+ GY+ ++ +G + +L+R G+ + F +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQD-----PIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 344 CSNLSPS-LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVS 402
+L + + +H+ +K+ SN V AL+ YS CG+++ AR +F+ + + V
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 403 LNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG-----KVAEGQKY 457
+++ Y ++G ++L+L M P N TF + L A G K GQ
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ-- 272
Query: 458 FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN---PGSIAL-------- 506
++K + +P ++ L + G ++DA ++ MP N P S +
Sbjct: 273 --ILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 507 --KAANHFLQLEPSNAVP 522
+A + F+++ + VP
Sbjct: 329 CNEAVDLFIRMREAFVVP 346
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 359/659 (54%), Gaps = 69/659 (10%)
Query: 84 ARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLIT--AS 141
A +F I +P+L+ +NT+ +A D SAL L+ M + +T ++ A
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 142 SNNLCLIKQLH--CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVF------------ 187
S +Q+H L + C D Y V+ SL++ Y +NG L++A +VF
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLY--VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 188 ------------------YEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL 229
++ +KD VSWN+M+ Y + EAL+LF++M+ +
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 230 DMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKV 289
D T+ ++++A + G Q H + GF N I + LIDLY+KC G++ +
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-GELETACGL 323
Query: 290 FEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP 349
FE +P D++ WNT+I GY+ Y +AL F+++ R G P+D + + ++ AC++L
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 350 -SLGKQIHA-LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMI 407
+G+ IH + +++ +N S+ +L+ MY+KCG++E A ++F+ + + S N+MI
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 408 AGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGF 467
G+A HG + LF M + I P +ITFV +LSAC+H+G + G+ F M +
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 468 EPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIA----LKA-------------AN 510
P+ EHY CMIDLLG +G +AE +I M P + LKA A
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 511 HFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFV 570
+ +++EP N YV+L+NIYA++G+W EVA R L+ D+G++K PG S IE+ +H F+
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 571 AEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFG 618
D HP +EI+ LEEM +++AG+VPD KE L HHSEKLA+AFG
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 682
Query: 619 LLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
L+ST G + ++KNLR+C +CH A K IS I REI RD RFH F+DG CSC DYW
Sbjct: 683 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 142/281 (50%), Gaps = 37/281 (13%)
Query: 253 FHAHLIKSGFHQNSHIGSGLID--LYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQ 310
HA +IK G H ++ S LI+ + + + + VF+ I +P+L++WNTM G++
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 311 KEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRI 369
+ AL + + +G P+ +F V+ +C+ G+QIH +K+ + +
Sbjct: 112 SSD-PVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD-L 169
Query: 370 SVNNALVAMYSKCGNLED-------------------------------ARRLFDRMPEH 398
V+ +L++MY + G LED A++LFD +P
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 399 NTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF 458
+ VS N+MI+GYA+ G EAL LF+ M++TN+ P T V+V+SACA +G + G++
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
+ D GF + + +IDL + G+L A L E +P+
Sbjct: 290 LWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 35/267 (13%)
Query: 355 IHALTIKIEIRSNRISVNNALVAMYSKC------GNLEDARRLFDRMPEHNTVSLNSMIA 408
IHA IKI + + N AL + C L A +F + E N + N+M
Sbjct: 52 IHAQMIKIGLHNT----NYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFR 107
Query: 409 GYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFE 468
G+A + AL+L+ M+ + P + TF VL +CA + EGQ+ + + G +
Sbjct: 108 GHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL-GCD 166
Query: 469 PEGEHYSCMIDLLGRAGKLTDAERLIEAMP-------------FNPGSIALKAANHFLQL 515
+ ++ +I + + G+L DA ++ + P + A F ++
Sbjct: 167 LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Query: 516 EPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGF-----------SWIEVKK 564
+ V + + + YA +G ++E + + M V+ IE+ +
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 565 QMHVFVAEDGSHPMIKEIHNYLEEMSR 591
Q+H+++ + G +K ++ ++ S+
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLYSK 313
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 318/527 (60%), Gaps = 35/527 (6%)
Query: 183 AKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM-VSLQLGLDMYTLASILTAF 241
A +VF ++ + + WN+++ Y + + A L++EM VS + D +T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 242 TSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLW 301
T++ D+ G H+ +I+SGF ++ + L+ LYA C GD+ KVF+++P+ DLV W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAW 190
Query: 302 NTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTI 360
N++I+G+++ + ++AL + ++N G PD + V ++SAC+ + +LGK++H I
Sbjct: 191 NSVINGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 361 KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEAL 420
K+ + N + +N L+ +Y++CG +E+A+ LFD M + N+VS S+I G A +G G EA+
Sbjct: 250 KVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 421 RLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
LF++M T + P ITFV +L AC+H G V EG +YF M++ + EP EH+ CM+D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 480 LLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSNAVP 522
LL RAG++ A I++MP P + + A LQLEP+++
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA+ +W +V IR+ M GV+K PG S +EV ++H F+ D SHP I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 583 HNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPILV 630
+ L+EM+ +++ GYVP +KE +V+HSEK+A+AF L+ST PI V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 631 MKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
+KNLR+C DCH AIK +S + REI VRD RFH FK+G CSC DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 65/350 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ ++K D+ G+++H++ +++ Y+ N + LY+ CG
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------ 170
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ASA ++FD++P+ DLV++N++I+ +A+ G E AL+L+
Sbjct: 171 -------------------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 121 DMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M K DGFT+ L++A + L L K++H I G +N LL Y+R G
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDM-YTLASI 237
++EAK +F EM + K+ VSW S++V + G EA++LF+ M S + L T I
Sbjct: 272 RVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH-------------QNSHIGSGLIDLYAKCSGDMR 284
L A + H ++K GF + H G ++DL A+ +G ++
Sbjct: 331 LYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGC-MVDLLAR-AGQVK 377
Query: 285 DCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPD 333
+ + +P QP++V+W T++ + + D L F ++ + P+
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTV---HGDSDLAEFARIQILQLEPN 424
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/621 (38%), Positives = 336/621 (54%), Gaps = 58/621 (9%)
Query: 93 QPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLH 152
Q + N +I+ GD + AL +F MR K + T + L+ S + + + H
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAH 113
Query: 153 CLAIYCGFDHYASVN----NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQ 208
L FD + N +L+CY RN ++A+ F M KD SWN+M+ Y +
Sbjct: 114 QL-----FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM-PFKDAASWNTMITGYAR 167
Query: 209 HREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI 268
E +A +LF M+ + + ++++ + G L+ +H K +
Sbjct: 168 RGEMEKARELFYSMMEK----NEVSWNAMISGYIE----CGDLEKASHFFKVAPVRGVVA 219
Query: 269 GSGLIDLYAKCSG-DMRDCMKVFEEIP-QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ +I Y K ++ + M F+++ +LV WN MISGY + D L F+ +
Sbjct: 220 WTAMITGYMKAKKVELAEAM--FKDMTVNKNLVTWNAMISGYVENSRPED-GLKLFRAML 276
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNL 385
G P+ + CS LS LG+QIH + K + N ++ +L++MY KCG L
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGEL 335
Query: 386 EDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSAC 445
DA +LF+ M + + V+ N+MI+GYAQHG +AL LF M++ I P ITFV+VL AC
Sbjct: 336 GDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC 395
Query: 446 AHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-- 503
H G V G YF M + EP+ +HY+CM+DLLGRAGKL +A +LI +MPF P +
Sbjct: 396 NHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAV 455
Query: 504 ---------------IALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRD 548
+A AA LQL NA YV LANIYA+ +WE+VA +R+ M++
Sbjct: 456 FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKE 515
Query: 549 RGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------- 601
V K PG+SWIE++ ++H F + D HP + IH L+E+ +KMK AGY P+
Sbjct: 516 SNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHN 575
Query: 602 -----KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREIT 656
KEK L+ HSEKLAVAFG + G I V KNLRICGDCH AIKFIS I REI
Sbjct: 576 VEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREII 635
Query: 657 VRDTYRFHCFKDGRCSCGDYW 677
VRDT RFH FKDG CSCGDYW
Sbjct: 636 VRDTTRFHHFKDGSCSCGDYW 656
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 196/403 (48%), Gaps = 30/403 (7%)
Query: 4 QVLKTCVGRRDLVTG-KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
+++ CV D+ + H + KN + +++ L I + + AH F++
Sbjct: 66 KIIARCVRSGDIDGALRVFHGMRAKNTITWNSLL----IGISKDPSRMMEAHQLFDEIPE 121
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ FS+N++L+ Y R + A+ FD++P D S+NT+I+ YA G+ E A LF M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVN-----NSLLTCYSRN 177
EK + +SG I L K H F A V +++T Y +
Sbjct: 182 MEKNEVSWNAMISGYIECGD----LEKASH-------FFKVAPVRGVVAWTAMITGYMKA 230
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
++ A+ +F +M K+ V+WN+M+ Y ++ + L+LF+ M+ + + L+S
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L + L L G Q H + KS + + LI +Y KC G++ D K+FE + + D
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC-GELGDAWKLFEVMKKKD 349
Query: 298 LVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIH 356
+V WN MISGY+Q +D+AL F+++ PD +FV V+ AC++ ++G
Sbjct: 350 VVAWNAMISGYAQHGN-ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 357 ALTI---KIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP 396
+ K+E + + + +V + + G LE+A +L MP
Sbjct: 409 ESMVRDYKVEPQPDHYT---CMVDLLGRAGKLEEALKLIRSMP 448
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/643 (34%), Positives = 356/643 (55%), Gaps = 30/643 (4%)
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++ +V N +L Y + A +LFD++ + + VS T+ISAYA+ G + A+ LF
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M + L+ + N L +Q+H I G S+ ++ Y + G
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+L AKRVF +M +K V+ ++V Y Q +AL+LF ++V+ + D + + +L
Sbjct: 234 WLVGAKRVFDQMA-VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A SLE+L G Q HA + K G +G+ L+D Y KCS C + F+EI +P+
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC-RAFQEIREPND 351
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSP-SLGKQIH 356
V W+ +ISGY Q ++ ++A+ FK L ++ + ++ + ACS L+ ++G Q+H
Sbjct: 352 VSWSAIISGYCQMSQF-EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A IK + ++ +AL+ MYSKCG L+DA +F+ M + V+ + I+G+A +G
Sbjct: 411 ADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 417 MEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSC 476
EALRLFE M+ + P ++TF++VL+AC+H G V +G+ M + P +HY C
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 477 MIDLLGRAGKLTDAERLIEAMPFNPGSIALK-----------------AANHFLQLEPSN 519
MID+ R+G L +A + ++ MPF P +++ K A QL+P +
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPED 589
Query: 520 AVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMI 579
YV+ N+Y +GKWEE A + +LM +R ++K+ SWI+ K ++H F+ D HP
Sbjct: 590 TAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQT 649
Query: 580 KEIHNYLEEMSRKMKQAGY---VPDKEKRLVHHSEKLAVAFGLLST--SYGEPILVMKNL 634
+EI+ L+E M+ + + ++ ++L+ HSE+LA+AFGL+S + PI V KNL
Sbjct: 650 QEIYEKLKEFDGFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNL 709
Query: 635 RICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
R C DCH K +S + G EI +RD+ RFH FK+G+CSC DYW
Sbjct: 710 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 204/473 (43%), Gaps = 52/473 (10%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
+ +LK+ V R L G+ +HA ++ + + + + +Y KCG L
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWL----------- 235
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
A+++FDQ+ V+ L+ Y G AL LF D
Sbjct: 236 --------------------VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD 275
Query: 122 MREKRFDTDGFTLSGLIT--ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
+ + + D F S ++ AS L L KQ+H G + SV L+ Y +
Sbjct: 276 LVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLG-LDMYTLASIL 238
+ A R F E+ E D VSW++++ Y Q + EA++ F+ + S L+ +T SI
Sbjct: 336 FESACRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
A + L D G Q HA IK + + S LI +Y+KC G + D +VFE + PD+
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC-GCLDDANEVFESMDNPDI 453
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHA 357
V W ISG++ S +AL F+K+ G P+ +F+ V++ACS+ GK
Sbjct: 454 VAWTAFISGHAYYGNAS-EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLD 512
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHG-- 414
++ + I + ++ +Y++ G L++A + MP E + +S ++G H
Sbjct: 513 TMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNL 572
Query: 415 ----IGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
I E LR + P +V + GK E + +M +
Sbjct: 573 ELGEIAGEELRQLD-------PEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 169/379 (44%), Gaps = 28/379 (7%)
Query: 185 RVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSL 244
++ ++ G+++ N +V+ +HR+ EA + QEM + + Y+ + A L
Sbjct: 42 KISHKQGQVE-----NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACREL 96
Query: 245 EDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTM 304
L G H + + + + + ++ +Y +C + D K+F+E+ + + V TM
Sbjct: 97 RSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRS-LEDADKLFDEMSELNAVSRTTM 155
Query: 305 ISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIE 363
IS Y++ + D+A+G F + G P + ++ + N + G+QIHA I+
Sbjct: 156 ISAYAE-QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 364 IRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLF 423
+ SN S+ +V MY KCG L A+R+FD+M V+ ++ GY Q G +AL+LF
Sbjct: 215 LCSN-TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 424 EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGR 483
++ + + F VL ACA ++ G++ + + + G E E + ++D +
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL-GLESEVSVGTPLVDFYIK 332
Query: 484 AGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
A R F ++ N V + + + Y ++EE
Sbjct: 333 CSSFESACRA------------------FQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 544 RLMRDRGVQKKPGFSWIEV 562
+ +R + F++ +
Sbjct: 375 KSLRSKNASILNSFTYTSI 393
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 60/323 (18%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F VLK C +L GK +HA K + + + Y KC +A AF +
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ N S ++ +IS Y E A+ FK
Sbjct: 347 REPNDVS-------------------------------WSAIISGYCQMSQFEEAVKTFK 375
Query: 121 DMREKRFDT-DGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+R K + FT + + A S + + Q+H AI ++L+T YS+
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G LD+A VF M D V+W + + + + EAL+LF++MVS + + T ++
Sbjct: 436 GCLDDANEVFESMDN-PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFH------QNSHIGSG------LIDLYAKCSGDMRD 285
LTA + HA L++ G H + ++ +ID+YA+ SG + +
Sbjct: 495 LTACS-----------HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR-SGLLDE 542
Query: 286 CMKVFEEIP-QPDLVLWNTMISG 307
+K + +P +PD + W +SG
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 50/250 (20%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ + + C D G +HA +K + S Y + I +YSKCGCL A+
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN------ 442
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
++F+ + PD+V++ IS +A G+ AL LF+
Sbjct: 443 -------------------------EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 477
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQLHCL-------AIYCGFDHYASVNNSLLTC 173
M + T ++TA S+ + + HCL + DHY + ++
Sbjct: 478 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY----DCMIDI 533
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE-------GLEALQLFQE-MVSL 225
Y+R+G LDEA + M D +SW + H+ G E QL E
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGY 593
Query: 226 QLGLDMYTLA 235
L ++YT A
Sbjct: 594 VLPFNLYTWA 603
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 317/544 (58%), Gaps = 36/544 (6%)
Query: 166 VNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
+ LL Y + L++A++V EM E K+ VSW +M+ Y Q EAL +F EM+
Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 226 QLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRD 285
+ +T A++LT+ L G Q H ++K + + +GS L+D+YAK +G +++
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK-AGQIKE 206
Query: 286 CMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACS 345
++FE +P+ D+V +I+GY+Q ++AL F +L+ G P+ ++ +++A S
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLG-LDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 346 NLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLN 404
L+ GKQ H ++ E+ + + N+L+ MYSKCGNL ARRLFD MPE +S N
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 405 SMIAGYAQHGIGMEALRLFEWML-ETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMK 462
+M+ GY++HG+G E L LF M E + P +T ++VLS C+H G F M+
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 463 DMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IA 505
+G +P EHY C++D+LGRAG++ +A I+ MP P + I
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 444
Query: 506 LKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQ 565
+++EP NA YV+L+N+YA++G+W +V +R +M + V K+PG SWI+ ++
Sbjct: 445 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQT 504
Query: 566 MHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKL 613
+H F A D +HP +E+ ++E+S KMKQAGYVPD KEK L+ HSEKL
Sbjct: 505 LHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKL 564
Query: 614 AVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSC 673
A+ FGL++T G PI V KNLRIC DCHN K S + RE+++RD RFH DG CSC
Sbjct: 565 ALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSC 624
Query: 674 GDYW 677
GDYW
Sbjct: 625 GDYW 628
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 174/344 (50%), Gaps = 25/344 (7%)
Query: 221 EMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
EM L + + ++L A L G + HAH+IK+ + +++ + L+ Y KC
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 281 GDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
+ D KV +E+P+ ++V W MIS YSQ +S +AL F ++ R P++ +F V
Sbjct: 102 C-LEDARKVLDEMPEKNVVSWTAMISRYSQT-GHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 341 ISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+++C S LGKQIH L +K S+ I V ++L+ MY+K G +++AR +F+ +PE +
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSH-IFVGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEG-QKYF 458
VS ++IAGYAQ G+ EAL +F + + P +T+ S+L+A + + G Q +
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 459 SMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPS 518
+++ F + + +ID+ + G L+ A RL + MP
Sbjct: 279 HVLRRELPFYAVLQ--NSLIDMYSKCGNLSYARRLFDNMP------------------ER 318
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEV 562
A+ + + Y+ G EV + RLMRD K + + V
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 37/244 (15%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C+ L GK +H L +K +N
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVK-----------------------------WNYD 185
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
H +F + LL YA+ +I AR++F+ +P+ D+VS +I+ YA G E AL +F
Sbjct: 186 SH--IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+ + + T + L+TA S L L+ KQ HC + YA + NSL+ YS+
Sbjct: 244 RLHSEGMSPNYVTYASLLTALS-GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMV-SLQLGLDMYTLAS 236
G L A+R+F M E + +SWN+M+V Y +H G E L+LF+ M ++ D TL +
Sbjct: 303 GNLSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 237 ILTA 240
+L+
Sbjct: 362 VLSG 365
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 44/192 (22%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ +L G L GK H L+ +PF A L N I +YSKCG LS
Sbjct: 256 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLS--------- 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
YAR+L FD +P+ +S+N ++ Y+ G L LF+
Sbjct: 307 --------------YARRL--------FDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 121 DMR-EKRFDTDGFTLSGLITASSNNLCLIKQLHCL--------AIYCGFDHYASVNNSLL 171
MR EKR D TL +++ S+ L+ G +HY + + L
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML- 403
Query: 172 TCYSRNGFLDEA 183
R G +DEA
Sbjct: 404 ---GRAGRIDEA 412
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 232/627 (37%), Positives = 340/627 (54%), Gaps = 74/627 (11%)
Query: 121 DMRE--KRFDTDGFTLSGLIT------ASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLT 172
++RE +RF + FT + L T + +L KQLHCL + GF + N L++
Sbjct: 28 NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMS 87
Query: 173 CYS-------------------------------RNGFLDEAKRVFYEMGEIKDEVSWNS 201
YS R G L A++VF EM + K +WN+
Sbjct: 88 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRK-LTTWNA 146
Query: 202 MVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSG 261
M+ Q E L LF+EM L D YTL S+ + L + G Q H + IK G
Sbjct: 147 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 206
Query: 262 FHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGC 321
+ + S L +Y + +G ++D V +P +LV WNT+I G +Q + L
Sbjct: 207 LELDLVVNSSLAHMYMR-NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYL 264
Query: 322 FKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISVNNALVAMYS 380
+K + G P+ +FV V+S+CS+L+ G+QIHA IKI S +V ++L++MYS
Sbjct: 265 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV-AVVSSLISMYS 323
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLE-TNIPPTNITFV 439
KCG L DA + F + + V +SMI+ Y HG G EA+ LF M E TN+ + F+
Sbjct: 324 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 383
Query: 440 SVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPF 499
++L AC+H+G +G + F MM + +GF+P +HY+C++DLLGRAG L AE +I +MP
Sbjct: 384 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 443
Query: 500 NP-----------------GSIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATI 542
+A + LQ++P+++ YV+LAN++A++ +W +V+ +
Sbjct: 444 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEV 503
Query: 543 RRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVPD- 601
R+ MRD+ V+K+ G SW E K ++H F D S KEI++YL+E++ +MK GY PD
Sbjct: 504 RKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDT 563
Query: 602 -----------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAI 650
KE LV HSEKLAVAF L+ G PI ++KNLR+C DCH A K+IS I
Sbjct: 564 ASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVI 623
Query: 651 AGREITVRDTYRFHCFKDGRCSCGDYW 677
REIT+RD RFH F +G+CSCGDYW
Sbjct: 624 KNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 213/435 (48%), Gaps = 10/435 (2%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQ 61
F +++C R+ L +GK LH L + + ++ NH + +YSK G +A + + +
Sbjct: 47 FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMR 106
Query: 62 HANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKD 121
N S N+L+ Y R + +AR++FD++P L ++N +I+ E LSLF++
Sbjct: 107 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 166
Query: 122 MREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
M F D +TL + + S+ ++ + +Q+H I G + VN+SL Y RNG
Sbjct: 167 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 226
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILT 239
L + + V M +++ V+WN++++ Q+ L L++ M + T ++L+
Sbjct: 227 LQDGEIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 285
Query: 240 AFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLV 299
+ + L G Q HA IK G + S LI +Y+KC G + D K F E D V
Sbjct: 286 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC-GCLGDAAKAFSEREDEDEV 344
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKL-NRVGYHPDDCSFVCVISACSNLSPSLGKQIHAL 358
+W++MIS Y + D+A+ F + + ++ +F+ ++ ACS+ S K +
Sbjct: 345 MWSSMISAYGFHGQ-GDEAIELFNTMAEQTNMEINEVAFLNLLYACSH-SGLKDKGLELF 402
Query: 359 TIKIEIRSNRISVNN--ALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGI 415
+ +E + + + +V + + G L+ A + MP + + V ++++ H
Sbjct: 403 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 462
Query: 416 GMEALRLFEWMLETN 430
A R+F+ +L+ +
Sbjct: 463 AEMAQRVFKEILQID 477
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL +C G+ +HA +K + + I +YSKCGCL A AF++
Sbjct: 279 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 338
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQP-----DLVSYNTLISAYADCGDTESA 115
+ + ++ +++AY + A +LF+ + + + V++ L+ A + G +
Sbjct: 339 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
L LF M EK GF G HY V + L
Sbjct: 399 LELFDMMVEKY----GFKP------------------------GLKHYTCVVDLL----G 426
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSL 225
R G LD+A+ + M D V W +++ A H+ A ++F+E++ +
Sbjct: 427 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 476
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/617 (36%), Positives = 349/617 (56%), Gaps = 42/617 (6%)
Query: 97 VSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAI 156
+S N LI + G + A+ + +E + L L ++L ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLS--QESSPSQQTYELLILCCGHRSSLSDALRVHRHIL 104
Query: 157 YCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEAL 216
G D + L+ YS G +D A++VF + + WN++ A G E L
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVF-DKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 217 QLFQEMVSLQLGLDMYTLASILTAFTSLE----DLVGGLQFHAHLIKSGFHQNSHIGSGL 272
L+ +M + + D +T +L A + E L+ G + HAHL + G+ + +I + L
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNR--VGY 330
+D+YA+ G + VF +P ++V W+ MI+ Y+ K + +AL F+++ R
Sbjct: 224 VDMYARF-GCVDYASYVFGGMPVRNVVSWSAMIACYA-KNGKAFEALRTFREMMRETKDS 281
Query: 331 HPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDAR 389
P+ + V V+ AC++L+ GK IH ++ + S + V +ALV MY +CG LE +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI-LPVISALVTMYGRCGKLEVGQ 340
Query: 390 RLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTG 449
R+FDRM + + VS NS+I+ Y HG G +A+++FE ML PT +TFVSVL AC+H G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 450 KVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPG------- 502
V EG++ F M G +P+ EHY+CM+DLLGRA +L +A ++++ M PG
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 503 ----------SIALKAANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQ 552
+A +A+ LEP NA YV+LA+IYA + W+EV +++L+ RG+Q
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 553 KKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMKQAGYVP------------ 600
K PG W+EV+++M+ FV+ D +P++++IH +L +++ MK+ GY+P
Sbjct: 521 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 580
Query: 601 DKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDT 660
+KE+ ++ HSEKLA+AFGL++TS GEPI + KNLR+C DCH KFIS +EI VRD
Sbjct: 581 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 640
Query: 661 YRFHCFKDGRCSCGDYW 677
RFH FK+G CSCGDYW
Sbjct: 641 NRFHRFKNGVCSCGDYW 657
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 139/316 (43%), Gaps = 45/316 (14%)
Query: 1 TFRQVLKTCVGRR----DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHA 56
T+ VLK CV L+ GK +HA + Y+ + +Y++ GC+ A +
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
F NV S++ ++A YA+ G AL
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKN-------------------------------GKAFEAL 268
Query: 117 SLFKDMREKRFDT--DGFTLSGLITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLT 172
F++M + D+ + T+ ++ A ++ L K +H + G D V ++L+T
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 173 CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMY 232
Y R G L+ +RVF M + +D VSWNS++ +YG H G +A+Q+F+EM++
Sbjct: 329 MYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387
Query: 233 TLASILTAFTSLEDLV--GGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVF 290
T S+L A S E LV G F G + ++DL + + + + K+
Sbjct: 388 TFVSVLGA-CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR-ANRLDEAAKMV 445
Query: 291 EEI-PQPDLVLWNTMI 305
+++ +P +W +++
Sbjct: 446 QDMRTEPGPKVWGSLL 461
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/711 (33%), Positives = 372/711 (52%), Gaps = 73/711 (10%)
Query: 4 QVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA 63
++LK C L G+S+HA H I+ NQ+ A
Sbjct: 36 ELLKVCANSSYLRIGESIHA---------------HLIVT--------------NQSSRA 66
Query: 64 -NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
+ + N L+ Y + AR+LFD +P+ ++VS+ ++ Y + G L LFK M
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 123 ---REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGF 179
E R + T+ ++S + KQ H + G + V N+L+ YS
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186
Query: 180 LDEAKRVFYEMGEIKDEVSWNSMVVAY---GQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
EA RV ++ D ++S + Y G +EGL+ L+ + + + T S
Sbjct: 187 NGEAIRVLDDLPYC-DLSVFSSALSGYLECGAFKEGLDVLR---KTANEDFVWNNLTYLS 242
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
L F++L DL LQ H+ +++ GF+ LI++Y KC G + +VF++
Sbjct: 243 SLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKC-GKVLYAQRVFDDTHAQ 301
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
++ L T++ Y Q + + ++AL F K++ P++ +F ++++ + LS G +
Sbjct: 302 NIFLNTTIMDAYFQDKSF-EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL 360
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H L +K R N + V NALV MY+K G++EDAR+ F M + V+ N+MI+G + HG+
Sbjct: 361 HGLVLKSGYR-NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGL 419
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
G EAL F+ M+ T P ITF+ VL AC+H G V +G YF+ + F +P+ +HY+
Sbjct: 420 GREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYT 479
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL-----------------KAANHFLQLEPS 518
C++ LL +AG DAE + P +A K A + ++ P+
Sbjct: 480 CIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPN 539
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPM 578
++ YV+L+NI+A S +WE VA +R LM +RGV+K+PG SWI ++ Q HVF+AED HP
Sbjct: 540 DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPE 599
Query: 579 IKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGE 626
I I+ ++E+ K+K GY PD +E L +HSEKLAVA+GL+ T
Sbjct: 600 ITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKS 659
Query: 627 PILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
P+ V KN+RIC DCH+AIK IS I+ R I +RD+ RFH F DG+CSC DYW
Sbjct: 660 PLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 41/320 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ L+ RDL +H+ ++ I +Y KCG + A F+ T
Sbjct: 239 TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT 298
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N+F N T++ AY E AL+LF
Sbjct: 299 HAQNIF-LNT------------------------------TIMDAYFQDKSFEEALNLFS 327
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQ---LHCLAIYCGFDHYASVNNSLLTCYSRN 177
M K + +T + L+ + + L L+KQ LH L + G+ ++ V N+L+ Y+++
Sbjct: 328 KMDTKEVPPNEYTFAILLNSIA-ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G +++A++ F M +D V+WN+M+ H G EAL+ F M+ + T +
Sbjct: 387 GSIEDARKAFSGM-TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIG--SGLIDLYAKCSGDMRDCMKVFEEIP- 294
L A + + + GL + L+K F I + ++ L +K +G +D P
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSK-AGMFKDAEDFMRTAPI 503
Query: 295 QPDLVLWNTMISGYSQKEEY 314
+ D+V W T+++ + Y
Sbjct: 504 EWDVVAWRTLLNACYVRRNY 523
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/712 (32%), Positives = 364/712 (51%), Gaps = 70/712 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T VL C R++ GK +H +K + L+N + +YSKCGC++ A F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ NV VS+NT++ ++ GDT + +
Sbjct: 354 NNKNV-------------------------------VSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 121 DMREKRFDTDGFTLSGL----ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
M D ++ L + + L +K+LHC ++ F + V N+ + Y++
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G L A+RVF+ + K SWN+++ + Q + +L +M L D +T+ S
Sbjct: 443 CGSLSYAQRVFHGI-RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L+A + L+ L G + H +I++ ++ + ++ LY C G++ +F+ +
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC-GELCTVQALFDAMEDK 560
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQI 355
LV WNT+I+GY Q + D+ALG F+++ G S + V ACS L S LG++
Sbjct: 561 SLVSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA +K + + + +L+ MY+K G++ + ++F+ + E +T S N+MI GY HG+
Sbjct: 620 HAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EA++LFE M T P ++TF+ VL+AC H+G + EG +Y MK FG +P +HY+
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGSIAL------------------KAANHFLQLEP 517
C+ID+LGRAG+L A R++ + + K A +LEP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHP 577
YV+L+N+YA GKWE+V +R+ M + ++K G SWIE+ +++ FV +
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 858
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+EI + + K+ + GY PD K ++L HSEKLA+ +GL+ TS G
Sbjct: 859 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 918
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
I V KNLRIC DCHNA K IS + REI VRD RFH FK+G CSCGDYW
Sbjct: 919 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 233/508 (45%), Gaps = 49/508 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKN-LVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ 59
T+ V+K C G D+ G ++H L +K LV
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE---------------------------- 220
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
+VF N L++ Y + A QLFD +P+ +LVS+N++I ++D G +E + L
Sbjct: 221 ----DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 120 KDMREKRFD----TDGFTLSGL--ITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTC 173
+M E+ D D TL + + A + L K +H A+ D +NN+L+
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 174 YSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVS--LQLGLDM 231
YS+ G + A+ +F +M K+ VSWN+MV + + + ++M++ + D
Sbjct: 337 YSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 232 YTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFE 291
T+ + + L + H + +K F N + + + YAKC G + +VF
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC-GSLSYAQRVFH 454
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
I + WN +I G++Q + +L ++ G PD + ++SACS L S
Sbjct: 455 GIRSKTVNSWNALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
LGK++H I+ + + + V +++++Y CG L + LFD M + + VS N++I GY
Sbjct: 514 LGKEVHGFIIRNWLERD-LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFS-MMKDMFGFEP 469
Q+G AL +F M+ I I+ + V AC+ + G++ + +K + E
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LED 630
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAM 497
+ +ID+ + G +T + ++ +
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGL 658
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 11/269 (4%)
Query: 234 LASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEE 292
L +L A +D+ G + H + S +N + + +I +YA C G D VF+
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC-GSPDDSRFVFDA 145
Query: 293 IPQPDLVLWNTMISGYSQKEEYSDQALGCF-KKLNRVGYHPDDCSFVCVISACSNLSP-S 350
+ +L WN +IS YS+ E Y D+ L F + ++ PD ++ CVI AC+ +S
Sbjct: 146 LRSKNLFQWNAVISSYSRNELY-DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G +H L +K + + + V NALV+ Y G + DA +LFD MPE N VS NSMI +
Sbjct: 205 IGLAVHGLVVKTGLVED-VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 411 AQHGIGMEALRLFEWMLETN----IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFG 466
+ +G E+ L M+E N P T V+VL CA ++ G+ +
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-R 322
Query: 467 FEPEGEHYSCMIDLLGRAGKLTDAERLIE 495
+ E + ++D+ + G +T+A+ + +
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFK 351
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
+G++IH L N + ++ MY+ CG+ +D+R +FD + N N++I+ Y
Sbjct: 102 MGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY 161
Query: 411 AQHGIGMEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 469
+++ + E L F E + T++ P + T+ V+ ACA V G ++ G
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVE 220
Query: 470 EGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
+ + ++ G G +TDA +L + MP
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMP 249
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/705 (32%), Positives = 374/705 (53%), Gaps = 48/705 (6%)
Query: 16 VTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHANV---------- 65
+GKSL L L + + N + ++ + C ++ + HA+V
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 66 FSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREK 125
+ N L+A Y R ++ A ++ Q+ D+V++N+LI Y + AL F DM
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 126 RFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEA 183
+D +++ +I AS +NL +LH I G+D V N+L+ YS+
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 184 KRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTS 243
R F M + KD +SW +++ Y Q+ +EAL+LF+++ ++ +D L SIL A +
Sbjct: 441 GRAFLRMHD-KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 244 LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNT 303
L+ ++ + H H+++ G ++ I + L+D+Y KC +M +VFE I D+V W +
Sbjct: 500 LKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR-NMGYATRVFESIKGKDVVSWTS 557
Query: 304 MISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKI 362
MIS + S +A+ F+++ G D + +C++SA ++LS + G++IH ++
Sbjct: 558 MISSSALNGNES-EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 363 EIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRL 422
S+ A+V MY+ CG+L+ A+ +FDR+ + SMI Y HG G A+ L
Sbjct: 617 GF-CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 423 FEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLG 482
F+ M N+ P +I+F+++L AC+H G + EG+ + +M+ + EP EHY C++D+LG
Sbjct: 676 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 735
Query: 483 RAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPSNAVPYVM 525
RA + +A ++ M P + I AA L+LEP N V+
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 526 LANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNY 585
++N++A G+W +V +R M+ G++K PG SWIE+ ++H F A D SHP KEI+
Sbjct: 796 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEK 855
Query: 586 LEEMSRKM-KQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYGEPILVMK 632
L E++RK+ ++ GYV D K + L HSE++A+A+GLL T + + K
Sbjct: 856 LSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITK 915
Query: 633 NLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
NLR+C DCH K +S + R+I +RD RFH F+ G CSCGD W
Sbjct: 916 NLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 215/449 (47%), Gaps = 39/449 (8%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSA-YLSNHFILLYSKCGCLSAAHHAFNQ 59
F VL+ C RR + G+ LH+ K F +L+ + +Y KCG L
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLD-------- 133
Query: 60 TQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLF 119
A ++FD++P ++NT+I AY G+ SAL+L+
Sbjct: 134 -----------------------DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY 170
Query: 120 KDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
+MR + + L+ A + ++ +LH L + G+ + N+L++ Y++N
Sbjct: 171 WNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKN 230
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
L A+R+F E D V WNS++ +Y + LE L+LF+EM + YT+ S
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSA 290
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNS-HIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
LTA G + HA ++KS H + ++ + LI +Y +C G M ++ ++
Sbjct: 291 LTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC-GKMPQAERILRQMNNA 349
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQI 355
D+V WN++I GY Q Y +AL F + G+ D+ S +I+A LS L G ++
Sbjct: 350 DVVTWNSLIKGYVQNLMYK-EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
HA IK SN + V N L+ MYSKC R F RM + + +S ++IAGYAQ+
Sbjct: 409 HAYVIKHGWDSN-LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EAL LF + + + + S+L A
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 148/360 (41%), Gaps = 46/360 (12%)
Query: 292 EIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPS 350
++P P L ++ +++ Q+ + S+ P + +F V+ C + S
Sbjct: 51 QVPSPKLACFDGVLTEAFQRLDVSENN------------SPVE-AFAYVLELCGKRRAVS 97
Query: 351 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGY 410
G+Q+H+ K + LV MY KCG+L+DA ++FD MP+ + N+MI Y
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 411 AQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPE 470
+G AL L+ M +P +F ++L ACA + G + S++ + G+
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL-GYHST 216
Query: 471 GEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKAANHFLQLEPSNAVPYVMLANIY 530
G + ++ + + L+ A RL + E +AV + + + Y
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQ-----------------EKGDAVLWNSILSSY 259
Query: 531 AASGKWEEVATIRRLMRDRGVQKKP-----------GFSWIEVKKQMHVFVAEDGSHPMI 579
+ SGK E + R M G GFS+ ++ K++H V + +H
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 580 KEIHNYLEEMSRKMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGD 639
+ N L M + G +P E+ L + V + L Y + ++ + L D
Sbjct: 320 LYVCNALIAM---YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/588 (36%), Positives = 324/588 (55%), Gaps = 37/588 (6%)
Query: 123 REKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR--NGFL 180
+ + DT L+ + N+L + Q+ AI + + V + C +
Sbjct: 20 KHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSM 79
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
A+ +F M E D V +NSM Y + LE LF E++ + D YT S+L A
Sbjct: 80 SYARHLFEAMSE-PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVL 300
+ L G Q H +K G N ++ LI++Y +C D+ VF+ I +P +V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE-DVDSARCVFDRIVEPCVVC 197
Query: 301 WNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNL-SPSLGKQIHALT 359
+N MI+GY+++ ++AL F+++ P++ + + V+S+C+ L S LGK IH
Sbjct: 198 YNAMITGYARRNR-PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 360 IKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEA 419
K + VN AL+ M++KCG+L+DA +F++M +T + ++MI YA HG ++
Sbjct: 257 KKHSF-CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 420 LRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMID 479
+ +FE M N+ P ITF+ +L+AC+HTG+V EG+KYFS M FG P +HY M+D
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 480 LLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEPSNAVP 522
LL RAG L DA I+ +P +P +A K + +L+ S+
Sbjct: 376 LLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGD 435
Query: 523 YVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEI 582
YV+L+N+YA + KWE V ++R++M+DR K PG S IEV +H F + DG ++
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKL 495
Query: 583 HNYLEEMSRKMKQAGYVPD-------------KEKRLVHHSEKLAVAFGLLSTSYGEPIL 629
H L+EM +++K +GYVPD KE L +HSEKLA+ FGLL+T G I
Sbjct: 496 HRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIR 555
Query: 630 VMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
V+KNLR+C DCHNA K IS I GR++ +RD RFH F+DG+CSCGD+W
Sbjct: 556 VVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 12/365 (3%)
Query: 41 ILLYSKCGCLSAAHH--AFNQTQHANVFSFNVLLAAYARQLRIAS----ARQLFDQIPQP 94
ILL SKC L A+ H SF L + + S AR LF+ + +P
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 95 DLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGLITASSNNLCLI--KQLH 152
D+V +N++ Y+ + SLF ++ E D +T L+ A + L +QLH
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 153 CLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREG 212
CL++ G D V +L+ Y+ +D A+ VF + E V +N+M+ Y +
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE-PCVVCYNAMITGYARRNRP 211
Query: 213 LEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGL 272
EAL LF+EM L + TL S+L++ L L G H + K F + + + L
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 273 IDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHP 332
ID++AKC G + D + +FE++ D W+ MI Y+ + +++++ F+++ P
Sbjct: 272 IDMFAKC-GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK-AEKSMLMFERMRSENVQP 329
Query: 333 DDCSFVCVISACSNLSP-SLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRL 391
D+ +F+ +++ACS+ G++ + + I ++V + S+ GNLEDA
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 392 FDRMP 396
D++P
Sbjct: 390 IDKLP 394
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 154/314 (49%), Gaps = 39/314 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF +LK C + L G+ LH L +K + + Y+ I +Y++C
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE------------ 178
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR +FD+I +P +V YN +I+ YA ALSLF+
Sbjct: 179 -------------------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
+M+ K + TL ++++ + +L L K +H A F Y VN +L+ +++ G
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
LD+A +F +M KD +W++M+VAY H + +++ +F+ M S + D T +L
Sbjct: 280 SLDDAVSIFEKM-RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL 338
Query: 239 TAFTSLEDLVGGLQFHAHLI-KSGFHQN-SHIGSGLIDLYAKCSGDMRDCMKVFEEIP-Q 295
A + + G ++ + ++ K G + H GS ++DL ++ +G++ D + +++P
Sbjct: 339 NACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS-MVDLLSR-AGNLEDAYEFIDKLPIS 396
Query: 296 PDLVLWNTMISGYS 309
P +LW +++ S
Sbjct: 397 PTPMLWRILLAACS 410
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/707 (32%), Positives = 364/707 (51%), Gaps = 70/707 (9%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
TF VL+TC G DL GK +H ++ + N I +Y KCG
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG------------ 245
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
+ SAR LFD++P+ D++S+N +IS Y + G L LF
Sbjct: 246 -------------------DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFF 286
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
MR D D TL+ +I+A + L + +H I GF SV NSL Y G
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG 346
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
EA+++F M E KD VSW +M+ Y + +A+ ++ M + D T+A++L
Sbjct: 347 SWREAEKLFSRM-ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+A +L DL G++ H IK+ + + LI++Y+KC + + +F IP+ ++
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC-IDKALDIFHNIPRKNV 464
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL-GKQIHA 357
+ W ++I+G + + F + ++ P+ + ++AC+ + + GK+IHA
Sbjct: 465 ISWTSIIAGLRLNNRCFEALI--FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHA 522
Query: 358 LTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGM 417
++ + + + NAL+ MY +CG + A F+ + + S N ++ GY++ G G
Sbjct: 523 HVLRTGVGLDDF-LPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGS 580
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+ LF+ M+++ + P ITF+S+L C+ + V +G YFS M+D +G P +HY+C+
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACV 639
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+DLLGRAG+L +A + I+ MP P A A H +L+ +
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
Y++L N+YA GKW EVA +RR+M++ G+ G SW+EVK ++H F+++D HP K
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTK 759
Query: 581 EIHNYLEEMSRKMKQAGYVP------------DKEKRLVHHSEKLAVAFGLLSTSYGEPI 628
EI+ LE KM + G +++ HSE+ A+AFGL++T G PI
Sbjct: 760 EINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPI 819
Query: 629 LVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGD 675
V KNL +C +CH+ +KFIS REI+VRD FH FKDG CSCGD
Sbjct: 820 WVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 210/441 (47%), Gaps = 49/441 (11%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F +++ C +R G ++++ L ++ L N F+ ++ + G L A + F +
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQI-----PQPDLVSYNTLISAYADCGDTESA 115
N+FS+NVL+ YA+Q A L+ ++ +PD+ ++ ++ CG
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRT---CGGIP-- 210
Query: 116 LSLFKDMREKRFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYS 175
+L K++H + G++ V N+L+T Y
Sbjct: 211 ----------------------------DLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 176 RNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLA 235
+ G + A+ +F M +D +SWN+M+ Y ++ E L+LF M L + D+ TL
Sbjct: 243 KCGDVKSARLLFDRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
S+++A L D G HA++I +GF + + + L +Y +G R+ K+F + +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLN-AGSWREAEKLFSRMER 360
Query: 296 PDLVLWNTMISGYSQKEEYS---DQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SL 351
D+V W TMISGY EY+ D+A+ ++ +++ PD+ + V+SAC+ L
Sbjct: 361 KDIVSWTTMISGY----EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 352 GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYA 411
G ++H L IK + S I NN L+ MYSKC ++ A +F +P N +S S+IAG
Sbjct: 417 GVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 412 QHGIGMEALRLFEWMLETNIP 432
+ EAL M T P
Sbjct: 476 LNNRCFEALIFLRQMKMTLQP 496
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 8/287 (2%)
Query: 214 EALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLI 273
EA++L M L++ +D +++ G + ++ + S +G+ +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 274 DLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVG-YHP 332
++ + G++ D VF ++ + +L WN ++ GY+ K+ Y D+A+ + ++ VG P
Sbjct: 137 AMFVR-FGNLVDAWYVFGKMSERNLFSWNVLVGGYA-KQGYFDEAMCLYHRMLWVGGVKP 194
Query: 333 DDCSFVCVISACSNLSPSL--GKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARR 390
D +F CV+ C + P L GK++H ++ + I V NAL+ MY KCG+++ AR
Sbjct: 195 DVYTFPCVLRTCGGI-PDLARGKEVHVHVVRYGYELD-IDVVNALITMYVKCGDVKSARL 252
Query: 391 LFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGK 450
LFDRMP + +S N+MI+GY ++G+ E L LF M ++ P +T SV+SAC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 451 VAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
G+ + + GF + + + + AG +AE+L M
Sbjct: 313 RRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/712 (32%), Positives = 372/712 (52%), Gaps = 80/712 (11%)
Query: 3 RQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQH 62
R++ +C + + + S+ A Y NL+P A F++
Sbjct: 37 RKLFDSC-DSKSISSWNSMVAGYFANLMP-------------------RDARKLFDEMPD 76
Query: 63 ANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDM 122
N+ S+N L++ Y + I AR++FD +P+ ++VS+ L+ Y G + A SLF M
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 123 REKRFDTDGFTLSGLITASS-NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLD 181
EK + L G + ++ C + ++ D S++ + G +D
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP-------DKDNIARTSMIHGLCKEGRVD 189
Query: 182 EAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAF 241
EA+ +F EM E + ++W +MV YGQ+ +A ++F M + S+L +
Sbjct: 190 EAREIFDEMSE-RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGY 244
Query: 242 TS---LEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDL 298
+ED F +K N+ I SGL G++ +VF+ + + +
Sbjct: 245 VQNGRIED--AEELFEVMPVKPVIACNAMI-SGLGQ-----KGEIAKARRVFDSMKERND 296
Query: 299 VLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSL--GKQIH 356
W T+I + ++ + +AL F + + G P + + ++S C++L+ SL GKQ+H
Sbjct: 297 ASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA-SLHHGKQVH 354
Query: 357 ALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIG 416
A ++ + + + V + L+ MY KCG L ++ +FDR P + + NS+I+GYA HG+G
Sbjct: 355 AQLVRCQFDVD-VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 417 MEALRLF-EWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYS 475
EAL++F E L + P +TFV+ LSAC++ G V EG K + M+ +FG +P HY+
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 476 CMIDLLGRAGKLTDAERLIEAMPFNPGS-----------------IALKAANHFLQLEPS 518
CM+D+LGRAG+ +A +I++M P + +A A +++EP
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Query: 519 NAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GSHP 577
N+ Y++L+N+YA+ G+W +VA +R+LM+ R V+K PG SW EV+ ++H F SHP
Sbjct: 534 NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP 593
Query: 578 MIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSYG 625
+ I L+E+ +++AGY PD K L +HSE+LAVA+ LL S G
Sbjct: 594 EQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEG 653
Query: 626 EPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
PI VMKNLR+C DCH AIK IS + REI +RD RFH F++G CSC DYW
Sbjct: 654 IPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 69/319 (21%)
Query: 168 NSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQL 227
N +T SR G + EA+++F + + K SWNSMV Y + +A +LF EM
Sbjct: 21 NVRITHLSRIGKIHEARKLF-DSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD--- 76
Query: 228 GLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCM 287
+N +GL+ Y K +G++ +
Sbjct: 77 ------------------------------------RNIISWNGLVSGYMK-NGEIDEAR 99
Query: 288 KVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKL---NRV------------GYHP 332
KVF+ +P+ ++V W ++ GY + D A F K+ N+V G
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKV-DVAESLFWKMPEKNKVSWTVMLIGFLQDGRID 158
Query: 333 DDCSFVCVISACSNLSPSL--------GKQIHALTIKIEIRSNRISVNNALVAMYSKCGN 384
D C +I N++ + G+ A I E+ + +V Y +
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
++DAR++FD MPE VS SM+ GY Q+G +A LFE M + P I +++S
Sbjct: 219 VDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKPV-IACNAMISG 274
Query: 445 CAHTGKVAEGQKYFSMMKD 463
G++A+ ++ F MK+
Sbjct: 275 LGQKGEIAKARRVFDSMKE 293
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T +L C L GK +HA ++ Y+++ + +Y KCG L + F++
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIP-----QPDLVSYNTLISAYADCGDTESA 115
++ +N +++ YA A ++F ++P +P+ V++ +SA + G E
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 116 LSLFKDM 122
L +++ M
Sbjct: 453 LKIYESM 459
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/714 (33%), Positives = 373/714 (52%), Gaps = 78/714 (10%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ V+K+ G L GK +HA+ +K Y+ N I LY K GC A++
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC------AWD-- 183
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
A ++F+++P+ D+VS+N++IS Y GD S+L LFK
Sbjct: 184 -----------------------AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 121 DMREKRFDTDGFTLSGLITASSNNLC--LIKQLHCLAIYCGFDHY-ASVNNSLLTCYSRN 177
+M + F D F+ + A S+ + K++HC A+ + V S+L YS+
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGL--DMYTLA 235
G + A+R+F M + ++ V+WN M+ Y ++ +A FQ+M S Q GL D+ T
Sbjct: 281 GEVSYAERIFNGMIQ-RNIVAWNVMIGCYARNGRVTDAFLCFQKM-SEQNGLQPDVITSI 338
Query: 236 SILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQ 295
++L A LE G H + ++ GF + + + LID+Y +C G ++ +F+ + +
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC-GQLKSAEVIFDRMAE 393
Query: 296 PDLVLWNTMISGYSQK-EEYSDQALGCFKKLNRVGYHPDDCSFVCVISA-CSNLSPSLGK 353
+++ WN++I+ Y Q + YS AL F++L PD + ++ A +LS S G+
Sbjct: 394 KNVISWNSIIAAYVQNGKNYS--ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 354 QIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQH 413
+IHA +K SN I + N+LV MY+ CG+LEDAR+ F+ + + VS NS+I YA H
Sbjct: 452 EIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 414 GIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEH 473
G G ++ LF M+ + + P TF S+L+AC+ +G V EG +YF MK +G +P EH
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 474 YSCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLE 516
Y CM+DL+GR G + A+R +E MPF P +IA AA ++E
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 517 PSNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSH 576
N YV+L N+YA +G+WE+V I+ LM +G+ + S +E K + HVF D SH
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Query: 577 PMIKEIHNYLEEMSR-------------KMKQAGYVPDKEKRLVHHSEKLAVAFGLLSTS 623
+I+ L+ +SR +++ V + HS +LA FGL+ST
Sbjct: 691 VATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTE 750
Query: 624 YGEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G + V N RIC CH ++ S + REI V D+ FH F +GRCSCG+YW
Sbjct: 751 TGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 210/404 (51%), Gaps = 11/404 (2%)
Query: 57 FNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESAL 116
+ T+ N + L +A + A QLFD++ + D +N +I + CG A+
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 117 SLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCY 174
+ M D FT +I A ++L K++H + I GF V NSL++ Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 175 SRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTL 234
+ G +A++VF EM E +D VSWNSM+ Y +G +L LF+EM+ D ++
Sbjct: 176 MKLGCAWDAEKVFEEMPE-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFST 234
Query: 235 ASILTAFTSLEDLVGGLQFHAHLIKSGFHQ-NSHIGSGLIDLYAKCSGDMRDCMKVFEEI 293
S L A + + G + H H ++S + + + ++D+Y+K G++ ++F +
Sbjct: 235 MSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK-YGEVSYAERIFNGM 293
Query: 294 PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN-RVGYHPDDCSFVCVISACSNLSPSLG 352
Q ++V WN MI Y++ +D L CF+K++ + G PD + + ++ A + L G
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFL-CFQKMSEQNGLQPDVITSINLLPASAILE---G 349
Query: 353 KQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQ 412
+ IH ++ + + + AL+ MY +CG L+ A +FDRM E N +S NS+IA Y Q
Sbjct: 350 RTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 413 HGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+G AL LF+ + ++++ P + T S+L A A + ++EG++
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 186/341 (54%), Gaps = 20/341 (5%)
Query: 166 VNNSLLT----CYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQE 221
VN+ LT ++ + +++A ++F EM + D WN M+ + +EA+Q +
Sbjct: 62 VNDPALTRALRGFADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 222 MVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSG 281
MV + D +T ++ + + L G + HA +IK GF + ++ + LI LY K G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL-G 179
Query: 282 DMRDCMKVFEEIPQPDLVLWNTMISGY-SQKEEYSDQALGCFKKLNRVGYHPDDCSFVCV 340
D KVFEE+P+ D+V WN+MISGY + + +S +L FK++ + G+ PD S +
Sbjct: 180 CAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS--SLMLFKEMLKCGFKPDRFSTMSA 237
Query: 341 ISACSNL-SPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHN 399
+ ACS++ SP +GK+IH ++ I + + V +++ MYSK G + A R+F+ M + N
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 400 TVSLNSMIAGYAQHGIGMEALRLFEWMLETN-IPPTNITFVSVLSACAHTGKVAEGQKY- 457
V+ N MI YA++G +A F+ M E N + P IT +++L A A + EG+
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIH 353
Query: 458 -FSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAM 497
++M + GF P + +ID+ G G+L AE + + M
Sbjct: 354 GYAMRR---GFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 385 LEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSA 444
+EDA +LFD M + + N MI G+ G+ +EA++ + M+ + T+ V+ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 445 CAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMP 498
A + EG+K +M+ + GF + + +I L + G DAE++ E MP
Sbjct: 140 VAGISSLEEGKKIHAMVIKL-GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 358/651 (54%), Gaps = 61/651 (9%)
Query: 2 FRQVLKTCVGRR-DLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
F ++L +C+ + + + +HA +K+ ++ N I YSKCG L F++
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
N++++N ++ + + A LF +P+ D ++N+++S +A E AL F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 121 DMREKRFDTDGFTLSGLITASS--NNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSRNG 178
M ++ F + ++ + +++A S N++ Q+H L F + ++L+ YS+ G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 179 FLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASIL 238
+++A+RVF EMG+ ++ VSWNS++ + Q+ +EAL +FQ M+ ++ D TLAS++
Sbjct: 202 NVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 239 TAFTSLEDLVGGLQFHAHLIKSGFHQNSHI-GSGLIDLYAKCSGDMRDCMKVFEEIP--- 294
+A SL + G + H ++K+ +N I + +D+YAKCS +++ +F+ +P
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS-RIKEARFIFDSMPIRN 319
Query: 295 ----------------------------QPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 326
+ ++V WN +I+GY+Q E +++AL F L
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALSLFCLLK 378
Query: 327 RVGYHPDDCSFVCVISACSNLSP-SLGKQIHALTIKIEIR-----SNRISVNNALVAMYS 380
R P SF ++ AC++L+ LG Q H +K + + I V N+L+ MY
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 381 KCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVS 440
KCG +E+ +F +M E + VS N+MI G+AQ+G G EAL LF MLE+ P +IT +
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 441 VLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFN 500
VLSAC H G V EG+ YFS M FG P +HY+CM+DLLGRAG L +A+ +IE MP
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 501 PGSIALKA-----------------ANHFLQLEPSNAVPYVMLANIYAASGKWEEVATIR 543
P S+ + A L++EPSN+ PYV+L+N+YA GKWE+V +R
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 544 RLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIKEIHNYLEEMSRKMK 594
+ MR GV K+PG SWI+++ HVF+ +D SHP K+IH+ L+ + +M+
Sbjct: 619 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 331/554 (59%), Gaps = 25/554 (4%)
Query: 64 NVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMR 123
NV+ + L+ YA+ R+ A + F +I +P+ VS+N LI+ + D ++A L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 124 EKRFDT-DGFTLSGLITASSNNL-C-LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFL 180
K T D T + L+T + + C L+KQ+H + G H ++ N++++ Y+ G +
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 181 DEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTA 240
+AKRVF +G KD +SWNSM+ + +H A +LF +M + D+YT +L+A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 241 FTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKC-SGDMRDCMKVFEEIPQPDLV 299
+ E + G H +IK G Q + + LI +Y + +G M D + +FE + DL+
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 300 LWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQIHAL 358
WN++I+G++QK S+ A+ F L DD +F ++ +CS+L+ LG+QIHAL
Sbjct: 375 SWNSIITGFAQKG-LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 359 TIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMP-EHNTVSLNSMIAGYAQHGIGM 417
K SN V ++L+ MYSKCG +E AR+ F ++ +H+TV+ N+MI GYAQHG+G
Sbjct: 434 ATKSGFVSNEF-VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 418 EALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEPEGEHYSCM 477
+L LF M N+ ++TF ++L+AC+HTG + EG + ++M+ ++ +P EHY+
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 478 IDLLGRAGKLTDAERLIEAMPFNPGSIALKA-----------------ANHFLQLEPSNA 520
+DLLGRAG + A+ LIE+MP NP + LK ANH L++EP +
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612
Query: 521 VPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAEDGSHPMIK 580
YV L+++Y+ KWEE A+++++M++RGV+K PG+SWIE++ Q+ F AED S+P+ +
Sbjct: 613 FTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQ 672
Query: 581 EIHNYLEEMSRKMK 594
+I+ +++++++M+
Sbjct: 673 DIYMMIKDLTQEMQ 686
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 235/472 (49%), Gaps = 28/472 (5%)
Query: 46 KCGCLSAAHHAFNQTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISA 105
KCG +S +++ N +L +Y + + A LFD++P+ D VS+NT+IS
Sbjct: 28 KCGSIS------------DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 106 YADCGDTESALSLFKDMREKRFDTDGFTLSGLI--TASSNNLCLIKQLHCLAIYCGFDHY 163
Y CG E A LF M+ D DG++ S L+ AS L +Q+H L I G++
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 164 ASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEM- 222
V +SL+ Y++ +++A F E+ E + VSWN+++ + Q R+ A L M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISE-PNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 223 VSLQLGLDMYTLASILTAFTSLEDLVGGL--QFHAHLIKSGFHQNSHIGSGLIDLYAKCS 280
+ + +D T A +LT + + L Q HA ++K G I + +I YA C
Sbjct: 195 MKAAVTMDAGTFAPLLTLLD--DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADC- 251
Query: 281 GDMRDCMKVFEEI-PQPDLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVC 339
G + D +VF+ + DL+ WN+MI+G+S K E + A F ++ R D ++
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFS-KHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 340 VISACSNLSPSL-GKQIHALTIKIEIRSNRISVNNALVAMYSK--CGNLEDARRLFDRMP 396
++SACS + GK +H + IK + S NAL++MY + G +EDA LF+ +
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLE-QVTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 397 EHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQK 456
+ +S NS+I G+AQ G+ +A++ F ++ + I + F ++L +C+ + GQ+
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 457 YFSMMKDMFGFEPEGEHYSCMIDLLGRAGKLTDAERLIEAMPFNPGSIALKA 508
++ GF S +I + + G + A + + + ++A A
Sbjct: 430 IHALATKS-GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%)
Query: 152 HCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHRE 211
HC AI CG V+N +L Y + GFL A +F EM + +D VSWN+M+ Y +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK-RDSVSWNTMISGYTSCGK 81
Query: 212 GLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSG 271
+A LF M +D Y+ + +L S++ G Q H +IK G+ N ++GS
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 272 LIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQ--ALGCFKKLNRVG 329
L+D+YAKC + D + F+EI +P+ V WN +I+G+ Q + LG + +
Sbjct: 142 LVDMYAKCE-RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM--KAA 198
Query: 330 YHPDDCSFVCVISACSN-LSPSLGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDA 388
D +F +++ + + +L KQ+HA +K+ ++ + I++ NA+++ Y+ CG++ DA
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ-HEITICNAMISSYADCGSVSDA 257
Query: 389 RRLFDRM-PEHNTVSLNSMIAGYAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACA 446
+R+FD + + +S NSMIAG+++H + A LF M + T+ +LSAC+
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 202/453 (44%), Gaps = 43/453 (9%)
Query: 19 KSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQTQHA-NVFSFNVLLAAYAR 77
K +HA LK + + N I Y+ CG +S A F+ + ++ S+N ++A +++
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 78 QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFKDMREKRFDTDGFTLSGL 137
SA +LF Q M+ +TD +T +GL
Sbjct: 283 HELKESAFELFIQ-------------------------------MQRHWVETDIYTYTGL 311
Query: 138 ITASSNNLCLI--KQLHCLAIYCGFDHYASVNNSLLTCYSR--NGFLDEAKRVFYEMGEI 193
++A S I K LH + I G + S N+L++ Y + G +++A +F E +
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF-ESLKS 370
Query: 194 KDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQF 253
KD +SWNS++ + Q +A++ F + S ++ +D Y +++L + + L L G Q
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Query: 254 HAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP-DLVLWNTMISGYSQKE 312
HA KSGF N + S LI +Y+KC G + K F++I V WN MI GY+Q
Sbjct: 431 HALATKSGFVSNEFVISSLIVMYSKC-GIIESARKCFQQISSKHSTVAWNAMILGYAQ-H 488
Query: 313 EYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLS-PSLGKQIHALTIKIEIRSNRISV 371
+L F ++ D +F +++ACS+ G ++ L + R+
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEH 548
Query: 372 NNALVAMYSKCGNLEDARRLFDRMPEH-NTVSLNSMIAGYAQHGIGMEALRLFEWMLETN 430
A V + + G + A+ L + MP + + + L + + G A ++ +LE
Sbjct: 549 YAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIE 608
Query: 431 IPPTNITFVSVLSACAHTGKVAEGQKYFSMMKD 463
P + T+VS+ + K E MMK+
Sbjct: 609 -PEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSK--CGCLSAAHHAFN 58
T+ +L C G + GKSLH + +K + +N I +Y + G + A F
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 59 QTQHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSL 118
+ ++ S +N++I+ +A G +E A+
Sbjct: 367 SLKSKDLIS-------------------------------WNSIITGFAQKGLSEDAVKF 395
Query: 119 FKDMREKRFDTDGFTLSGLITASSN--NLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR 176
F +R D + S L+ + S+ L L +Q+H LA GF V +SL+ YS+
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSK 455
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G ++ A++ F ++ V+WN+M++ Y QH G +L LF +M + + LD T +
Sbjct: 456 CGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTA 515
Query: 237 ILTA 240
ILTA
Sbjct: 516 ILTA 519
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQ-- 59
F +L++C L G+ +HAL K+ + ++ + I++YSKCG + +A F Q
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 60 TQHANVFSFNVLLAAYAR----QLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESA 115
++H+ V ++N ++ YA+ Q+ + Q+ +Q + D V++ +++A + G +
Sbjct: 471 SKHSTV-AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG 529
Query: 116 LSLFKDMR 123
L L M
Sbjct: 530 LELLNLME 537
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 241/713 (33%), Positives = 376/713 (52%), Gaps = 79/713 (11%)
Query: 2 FRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYS-KCGCLSAAHHAFNQT 60
F Q+L+ C+ R + K++ A LK+ F A +S ++ S KCG
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKS--GFPAEISGSKLVDASLKCG------------ 113
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
I ARQ+FD + + +V++N+LI+ ++ A+ +++
Sbjct: 114 -------------------DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR 154
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLIKQL---HCLAIYCGFD-HYASVNNSLLTCYSR 176
M D +TLS + A S+ L L K+ H LA+ G + V ++L+ Y +
Sbjct: 155 LMITNNVLPDEYTLSSVFKAFSD-LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 213
Query: 177 NGFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLAS 236
G EAK V + E KD V +++V Y Q E EA++ FQ M+ ++ + YT AS
Sbjct: 214 FGKTREAKLVLDRVEE-KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 237 ILTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQP 296
+L + +L+D+ G H ++KSGF + L+ +Y +CS + D ++VF+ I P
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL-VDDSLRVFKCIEYP 331
Query: 297 DLVLWNTMISGYSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSP-SLGKQI 355
+ V W ++ISG Q + AL F+K+ R P+ + + CSNL+ G+QI
Sbjct: 332 NQVSWTSLISGLVQNGR-EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 356 HALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPEHNTVSLNSMIAGYAQHGI 415
H + K ++ + + L+ +Y KCG + AR +FD + E + +SLN+MI YAQ+G
Sbjct: 391 HGIVTKYGFDRDKYA-GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 416 GMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYF-SMMKDMFGFEPEGEHY 474
G EAL LFE M+ + P ++T +SVL AC ++ V EG + F S KD +HY
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIML--TNDHY 507
Query: 475 SCMIDLLGRAGKLTDAERLIEAMPFNPG-----------------SIALKAANHFLQLEP 517
+CM+DLLGRAG+L +AE L + NP +A + L++EP
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP 566
Query: 518 SNAVPYVMLANIYAASGKWEEVATIRRLMRDRGVQKKPGFSWIEVKKQMHVFVAED-GSH 576
+ ++++N+YA++GKW V ++ M+D ++K P SW+E+ K+ H F+A D SH
Sbjct: 567 GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSH 626
Query: 577 PMIKEIHNYLEEMSRKMKQAGYVPD------------KEKRLVHHSEKLAVAFGLLSTSY 624
P ++I LEE+ +K K GYV D KE+ L HSEKLA+AF + +
Sbjct: 627 PNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NV 685
Query: 625 GEPILVMKNLRICGDCHNAIKFISAIAGREITVRDTYRFHCFKDGRCSCGDYW 677
G I ++KNLR+C DCH+ IK +S + REI RD+ RFH F+DG CSCGDYW
Sbjct: 686 GGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 47/380 (12%)
Query: 1 TFRQVLKTCVGRRDLVTGKSLHALYLKNLVPFSAYLSNHFILLYSKCGCLSAAHHAFNQT 60
T+ VL +C +D+ GK +H L +K+ F + L+ +QT
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKS--GFESALA--------------------SQT 306
Query: 61 QHANVFSFNVLLAAYARQLRIASARQLFDQIPQPDLVSYNTLISAYADCGDTESALSLFK 120
LL Y R + + ++F I P+ VS+ +LIS G E AL F+
Sbjct: 307 S---------LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 121 DMREKRFDTDGFTLSGLITASSNNLCLI---KQLHCLAIYCGFDHYASVNNSLLTCYSRN 177
M + FTLS + S NL + +Q+H + GFD + L+ Y +
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCS-NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 178 GFLDEAKRVFYEMGEIKDEVSWNSMVVAYGQHREGLEALQLFQEMVSLQLGLDMYTLASI 237
G D A+ VF + E+ D +S N+M+ +Y Q+ G EAL LF+ M++L L + T+ S+
Sbjct: 417 GCSDMARLVFDTLSEV-DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 238 LTAFTSLEDLVGGLQFHAHLIKSGFHQNSHIGSGLIDLYAKCSGDMRDCMKVFEEIPQPD 297
L A + + G + K + + ++DL + +G + + + E+ PD
Sbjct: 476 LLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGR-AGRLEEAEMLTTEVINPD 534
Query: 298 LVLWNTMISG--YSQKEEYSDQALGCFKKLNRVGYHPDDCSFVCVISACSNLSPSLGKQI 355
LVLW T++S +K E +++ +K+ + P D + ++ SNL S GK
Sbjct: 535 LVLWRTLLSACKVHRKVEMAERIT---RKILEI--EPGDEGTLILM---SNLYASTGKWN 586
Query: 356 HALTIKIEIRSNRISVNNAL 375
+ +K +++ ++ N A+
Sbjct: 587 RVIEMKSKMKDMKLKKNPAM 606
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,983,660
Number of Sequences: 539616
Number of extensions: 10244988
Number of successful extensions: 33664
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 23999
Number of HSP's gapped (non-prelim): 2559
length of query: 677
length of database: 191,569,459
effective HSP length: 124
effective length of query: 553
effective length of database: 124,657,075
effective search space: 68935362475
effective search space used: 68935362475
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)