BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037540
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29136|MEP1_SOYBN Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2
Length = 305
Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 143/264 (54%), Gaps = 30/264 (11%)
Query: 58 GSNITGMSELKKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETIS 117
G N G+S +K YF GY+ + +F D FD L SA+ +YQ L VTGK D T+
Sbjct: 48 GQNYKGLSNVKNYFHHLGYIP-NAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDINTLK 106
Query: 118 TIMSPRCGVSD----TSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDL 173
IM+PRCGV D T+ Y++F PRW + LTYAFS +D
Sbjct: 107 QIMTPRCGVPDIIINTNKTTSFGMISDYTFFKDMPRW-QAGTTQLTYAFSPEPRLD---- 161
Query: 174 TDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF------------ 221
K+A +F +W+ V+ + F E Y++A+I I F +HGD PF
Sbjct: 162 DTFKSAIARAFSKWTPVVNIAFQETTSYETANIKILFASKNHGDPYPFDGPGGILGHAFA 221
Query: 222 ------HFDAAETWAVDMESVKSRV--AVDLESVATHEIGHVLGLAHTSVKEAVMYPSLT 273
HFDA E W + KS V A DLESVA HEIGH+LGL H+S A+MYPS+
Sbjct: 222 PTDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIP 281
Query: 274 PRTRKVDLKVDDVEGVQALYGSNP 297
PRTRKV+L DD++G++ LYG NP
Sbjct: 282 PRTRKVNLAQDDIDGIRKLYGINP 305
>sp|P79287|MMP20_PIG Matrix metalloproteinase-20 OS=Sus scrofa GN=MMP20 PE=2 SV=1
Length = 483
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 116/255 (45%), Gaps = 45/255 (17%)
Query: 67 LKKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGV 126
L KY+T+ G + + + Q GL VTGKLD T+ I PRCGV
Sbjct: 45 LDKYYTKKGGHQVG--EMVAKGGNSMVKKIKELQAFFGLRVTGKLDRTTMDVIKRPRCGV 102
Query: 127 SDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQR 186
D + Y F G+P+W + TLTY SK + +V A + + Q
Sbjct: 103 PDVA---------NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDKAMEMALQA 148
Query: 187 WSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF---------------------HFDA 225
WSS +P++F + + ADI I F GDHGD PF HFD
Sbjct: 149 WSSAVPLSFVRV-NAGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDN 207
Query: 226 AETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTR-KVDLKVD 284
AE W + M +L +VA HE GH LGLAH++ A+MYP+ + L D
Sbjct: 208 AEKWTMGMN------GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKD 261
Query: 285 DVEGVQALYGSNPNF 299
DV+G+QALYG F
Sbjct: 262 DVKGIQALYGPRKTF 276
>sp|O60882|MMP20_HUMAN Matrix metalloproteinase-20 OS=Homo sapiens GN=MMP20 PE=1 SV=3
Length = 483
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 107/222 (48%), Gaps = 43/222 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGKLD T++ I PRCGV D + Y F G+P+W + TLT
Sbjct: 76 QAFFGLQVTGKLDQTTMNVIKKPRCGVPDVA---------NYRLFPGEPKWKKN---TLT 123
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y SK + +V A + + Q WSS +P++F I + ADI I F +GDHGD
Sbjct: 124 YRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRI-NSGEADIMISFENGDHGDSY 180
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD AE W + +L +VA HE GH LGL
Sbjct: 181 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN------GFNLFTVAAHEFGHALGL 234
Query: 259 AHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYGSNPNF 299
AH++ A+MYP+ + L DDV+G+QALYG F
Sbjct: 235 AHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRKVF 276
>sp|P57748|MMP20_MOUSE Matrix metalloproteinase-20 OS=Mus musculus GN=Mmp20 PE=2 SV=1
Length = 482
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 104/217 (47%), Gaps = 43/217 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGKLD T++ I PRCGV D + Y F G+P+W + LT
Sbjct: 75 QIFFGLKVTGKLDQNTMNVIKKPRCGVPDVA---------NYRLFPGEPKWKKN---ILT 122
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y SK + T+V A + + WS+ +P+NF I + ADI I F GDHGD
Sbjct: 123 YRISK--YTPSMSPTEVDKAIQMALHAWSTAVPLNFVRI-NSGEADIMISFETGDHGDSY 179
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD AE W + +L +VA HE GH LGL
Sbjct: 180 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN------GFNLFTVAAHEFGHALGL 233
Query: 259 AHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYG 294
H++ A+MYP+ + + L DDV+G+QALYG
Sbjct: 234 GHSTDPSALMYPTYKYQNPYRFHLPKDDVKGIQALYG 270
>sp|O18767|MMP20_BOVIN Matrix metalloproteinase-20 OS=Bos taurus GN=MMP20 PE=1 SV=1
Length = 481
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 105/222 (47%), Gaps = 43/222 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGKLD T+ I PRCGV D + Y F G+P+W + TLT
Sbjct: 74 QEFFGLRVTGKLDRATMDVIKRPRCGVPDVA---------NYRLFPGEPKWKKN---TLT 121
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y SK + +V A + + + WSS +P+NF I + ADI I F GDHGD
Sbjct: 122 YRISK--YTPSMTPAEVDRAMEMALRAWSSAVPLNFVRI-NAGEADIMISFETGDHGDSY 178
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD AE W + +L +VA HE GH LGL
Sbjct: 179 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN------GFNLFTVAAHEFGHALGL 232
Query: 259 AHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYGSNPNF 299
AH++ A+M+P+ + L DDV+G+QALYG F
Sbjct: 233 AHSTDPSALMFPTYKYQNPYGFRLPKDDVKGIQALYGPRRAF 274
>sp|P22757|HE_PARLI Hatching enzyme OS=Paracentrotus lividus PE=1 SV=1
Length = 587
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 121/259 (46%), Gaps = 40/259 (15%)
Query: 56 EMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSET 115
E G + + + LK + +FGY T F + + SA++ +Q G+ TG LD++T
Sbjct: 93 EEGVHESNVEILKAHLEKFGYTPPGST-FGEA-NLNYTSAILDFQEHGGINQTGILDADT 150
Query: 116 ISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTD 175
+ +PRCGV D + W R P+T ++ +D+ + D
Sbjct: 151 AELLSTPRCGVPDV-----------LPFVTSSITWSRNQPVTYSFGALTSDL----NQND 195
Query: 176 VKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF-------------- 221
VK + +F+ W V ++F E+ D S DI I F DHGDG F
Sbjct: 196 VKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGISFDGRGGVLAHAFLPR 255
Query: 222 ----HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTR 277
HFD +ETW + +R +L VA HE GH LGL H++V+ A+MYP
Sbjct: 256 NGDAHFDDSETW-----TEGTRSGTNLFQVAAHEFGHSLGLYHSTVRSALMYPYYQGYVP 310
Query: 278 KVDLKVDDVEGVQALYGSN 296
L DD+ G+++LYGSN
Sbjct: 311 NFRLDNDDIAGIRSLYGSN 329
>sp|P91953|HE_HEMPU 50 kDa hatching enzyme OS=Hemicentrotus pulcherrimus PE=1 SV=1
Length = 591
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 66 ELKKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCG 125
+LK +FGY+ L T F + + SA++ YQ G+ TG LD+ET + + +PRCG
Sbjct: 106 KLKANLEQFGYVPLGST-FGEA-NINYTSAILEYQQNGGINQTGILDAETAALLDTPRCG 163
Query: 126 VSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQ 185
V D Y G W R +T ++ D+ T +K + +FQ
Sbjct: 164 VPDI-----------LPYVTGGIAWPRNVAVTYSFGTLSNDL----SQTAIKNELRRAFQ 208
Query: 186 RWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF------------------HFDAAE 227
W V + F E+ D S DI I F +HGDG F HFD +E
Sbjct: 209 VWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSE 268
Query: 228 TWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTRKVDLKVDDVE 287
W + S +L VA HE GH LGL H+ V+ A+MYP +L DD+
Sbjct: 269 RWTIGTNS-----GTNLFQVAAHEFGHSLGLYHSDVQSALMYPYYRGYNPNFNLDRDDIA 323
Query: 288 GVQALYGSN 296
G+ +LYG N
Sbjct: 324 GITSLYGRN 332
>sp|P22894|MMP8_HUMAN Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1
Length = 467
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 104/222 (46%), Gaps = 45/222 (20%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGK + ET+ + PRCGV D+ + G P+W R LT
Sbjct: 67 QRFFGLNVTGKPNEETLDMMKKPRCGVPDSG---------GFMLTPGNPKWER---TNLT 114
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + +V+ A K +F+ WS P+ FT I ADI+I FY DHGD
Sbjct: 115 YRIR--NYTPQLSEAEVERAIKDAFELWSVASPLIFTRI-SQGEADINIAFYQRDHGDNS 171
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFDA ETW + +L VA HE GH LGL
Sbjct: 172 PFDGPNGILAHAFQPGQGIGGDAHFDAEETW------TNTSANYNLFLVAAHEFGHSLGL 225
Query: 259 AHTSVKEAVMYPSLTPR-TRKVDLKVDDVEGVQALYG--SNP 297
AH+S A+MYP+ R T L DD++G+QA+YG SNP
Sbjct: 226 AHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSNP 267
>sp|P03956|MMP1_HUMAN Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3
Length = 469
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 43/220 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGK D+ET+ + PRCGV D + ++ G PRW + LT
Sbjct: 68 QEFFGLKVTGKPDAETLKVMKQPRCGVPDVA---------QFVLTEGNPRWEQ---THLT 115
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + DV A + +FQ WS+V P+ FT++ + ADI I F GDH D
Sbjct: 116 YRIE--NYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVRGDHRDNS 172
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD E W + +L VA HE+GH LGL
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREY------NLHRVAAHELGHSLGL 226
Query: 259 AHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
+H++ A+MYPS T + V L DD++G+QA+YG + N
Sbjct: 227 SHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQN 265
>sp|P28862|MMP3_MOUSE Stromelysin-1 OS=Mus musculus GN=Mmp3 PE=2 SV=2
Length = 477
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 52/289 (17%)
Query: 31 PVTIITANNTAHSATWYDFARLLDAEMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDT 90
PV + S +D AR DA GM L+KY + L+ F D+
Sbjct: 5 PVLLWLCVVVCSSYPLHDSARDDDA-------GMELLQKYLENYYGLAKDVKQFIKKKDS 57
Query: 91 QL-QSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPR 149
L + Q LGL +TGKLDS T+ + PRCGV D +S F G P+
Sbjct: 58 SLIVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPDVG---------GFSTFPGSPK 108
Query: 150 WVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIG 209
W R+S +T D+ V +A + + + W V P+ F+ I + + ADI I
Sbjct: 109 W-RKSHITYRIVNYTPDL----PRQSVDSAIEKALKVWEEVTPLTFSRISEGE-ADIMIS 162
Query: 210 FYHGDHGDGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVA 248
F G+HGD PF HFD E W D+ +L VA
Sbjct: 163 FAVGEHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWTEDV------TGTNLFLVA 216
Query: 249 THEIGHVLGLAHTSVKEAVMYPSLTPRT--RKVDLKVDDVEGVQALYGS 295
HE+GH LGL H++ EA+MYP T + L DDV+G+Q+LYG+
Sbjct: 217 AHELGHSLGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGT 265
>sp|P08254|MMP3_HUMAN Stromelysin-1 OS=Homo sapiens GN=MMP3 PE=1 SV=2
Length = 477
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 125/274 (45%), Gaps = 53/274 (19%)
Query: 53 LDAEMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDT-QLQSAVVSYQTKLGLPVTGKL 111
LD T M+ ++KY + L F D+ + + Q LGL VTGKL
Sbjct: 20 LDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFLGLEVTGKL 79
Query: 112 DSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYI 171
DS+T+ + PRCGV D + F G P+W + LTY +++Y
Sbjct: 80 DSDTLEVMRKPRCGVPDVG---------HFRTFPGIPKWRK---THLTYR-----IVNYT 122
Query: 172 -DLTD--VKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF------- 221
DL V +A + + + W V P+ F+ +Y+ + ADI I F +HGD PF
Sbjct: 123 PDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGE-ADIMISFAVREHGDFYPFDGPGNVL 181
Query: 222 --------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAV 267
HFD E W D +L VA HEIGH LGL H++ EA+
Sbjct: 182 AHAYAPGPGINGDAHFDDDEQWTKDT------TGTNLFLVAAHEIGHSLGLFHSANTEAL 235
Query: 268 MYP---SLTPRTRKVDLKVDDVEGVQALYGSNPN 298
MYP SLT TR L DD+ G+Q+LYG P+
Sbjct: 236 MYPLYHSLTDLTR-FRLSQDDINGIQSLYGPPPD 268
>sp|Q9EPL6|MMP1B_MOUSE Interstitial collagenase B OS=Mus musculus GN=Mmp1b PE=2 SV=1
Length = 463
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 43 SATWYDFARLLDAEMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTK 102
+A+ Y F + D + T L+ Y+ + N +V +L+ Q
Sbjct: 12 AASSYSFPVIQDGLQKNVKTVWKYLENYYNLGKNMQAKNVNGKEVMAEKLRQM----QQL 67
Query: 103 LGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAF 162
GL VTG D ET+ + PRCGV D + Y+ + PRW + LTY
Sbjct: 68 FGLKVTGNSDPETLRAMKKPRCGVPDVA---------PYAITHNNPRWTKTH---LTY-- 113
Query: 163 SKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGD----- 217
S + Y+ V+ A +F+ WS V P+ F +++ + DI + F+ GDHGD
Sbjct: 114 SILNYTPYLSKAVVEDAIARAFRVWSDVTPLTFQRVFE-EEGDIVLSFHRGDHGDLYTFD 172
Query: 218 GQPFHFDAA----------ETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAV 267
G +HF A + +D + + +L V HE+GH LGL+H++ +EA+
Sbjct: 173 GSKYHFAHAFLPGLGLGGNVHYDLDQKWTDNNEDFNLFYVTAHELGHSLGLSHSNDEEAL 232
Query: 268 MYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
M+PS T + L DD+ +QALYG +PN
Sbjct: 233 MFPSYTWSNKDFVLNQDDINRIQALYGPSPN 263
>sp|P28863|MMP3_RABIT Stromelysin-1 OS=Oryctolagus cuniculus GN=MMP3 PE=2 SV=1
Length = 478
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 121/270 (44%), Gaps = 51/270 (18%)
Query: 55 AEMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDTQ-LQSAVVSYQTKLGLPVTGKLDS 113
A ++ T M L++Y + L F D+ + + Q LGL VTGKLDS
Sbjct: 23 ASRDADTTNMDLLQQYLENYYNLEKDVKQFVKRKDSSPVVKKIQEMQKFLGLEVTGKLDS 82
Query: 114 ETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYI-D 172
T+ I PRCGV D +S F G P+W + LTY +++Y D
Sbjct: 83 NTLEVIRKPRCGVPDVG---------HFSTFPGTPKWTK---THLTYR-----IVNYTPD 125
Query: 173 LTD--VKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF--------- 221
L V AA + + + W V P+ F+ Y+ + ADI I F +HGD PF
Sbjct: 126 LPRDAVDAAIEKALKVWEEVTPLTFSRKYEGE-ADIMISFGVREHGDFIPFDGPGNVLAH 184
Query: 222 ------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMY 269
HFD E W K +L VA HE+GH LGL H++ EA+MY
Sbjct: 185 AYAPGPGINGDAHFDDDEQW------TKDTTGTNLFLVAAHELGHSLGLFHSANPEALMY 238
Query: 270 PSLTPRT--RKVDLKVDDVEGVQALYGSNP 297
P T + L DDV+G+Q+LYG P
Sbjct: 239 PVYNAFTDLARFRLSQDDVDGIQSLYGPAP 268
>sp|P33435|MMP13_MOUSE Collagenase 3 OS=Mus musculus GN=Mmp13 PE=1 SV=1
Length = 472
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 122/253 (48%), Gaps = 55/253 (21%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q+ GL VTGKLD T+ + PRCGV D Y+ F PR ++ S LT
Sbjct: 73 QSFFGLEVTGKLDDPTLDIMRKPRCGVPDVG---------EYNVF---PRTLKWSQTNLT 120
Query: 160 YAFSKTDMIDY---IDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y + ++V+ AF+ +F+ WS V P+NFT IYD +ADI I F +HG
Sbjct: 121 YR-----IVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTRIYD-GTADIMISFGTKEHG 174
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD ETW S +L VA HE+GH
Sbjct: 175 DFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETW------TSSSKGYNLFIVAAHELGHS 228
Query: 256 LGLAHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYG---SNPNFKFSSLLESEN-- 309
LGL H+ A+M+P T + L DDV+G+Q LYG +PN K E +
Sbjct: 229 LGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYGPGDEDPNPKHPKTPEKCDPA 288
Query: 310 FSNDAI-ALKGRT 321
S DAI +L+G T
Sbjct: 289 LSLDAITSLRGET 301
>sp|O18927|MMP13_HORSE Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1
Length = 472
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 125/254 (49%), Gaps = 57/254 (22%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q+ GL VTGKLD T+ + PRCGV D Y+ F PR ++ M LT
Sbjct: 73 QSFFGLEVTGKLDDNTLDIMKKPRCGVPDVG---------EYNVF---PRTLKWPKMNLT 120
Query: 160 YAFSKTDMIDYI-DLT--DVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y DLT +V+ AFK +F+ WS V P+NFT +Y+ +ADI I F +HG
Sbjct: 121 YR-----IVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRLYN-GTADIMISFGTKEHG 174
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD ETW S +L VA HE GH
Sbjct: 175 DFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETW------TSSSKGYNLFLVAAHEFGHS 228
Query: 256 LGLAHTSVKEAVMYP--SLTPRTRKVDLKVDDVEGVQALYG---SNPNFKFSSLLES--E 308
LGL H+ A+M+P + T ++ V L DDV+G+Q LYG +PN K +
Sbjct: 229 LGLDHSKDPGALMFPIYTYTGKSHFV-LPDDDVQGIQYLYGPGDEDPNPKHPKTPDKCDP 287
Query: 309 NFSNDAI-ALKGRT 321
+ S DAI +L+G T
Sbjct: 288 SLSLDAITSLRGET 301
>sp|Q9XSZ5|MMP1_HORSE Interstitial collagenase OS=Equus caballus GN=MMP1 PE=2 SV=1
Length = 469
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 104/220 (47%), Gaps = 43/220 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGK D+ET++ + PRCGV D + + G PRW LT
Sbjct: 68 QEFFGLKVTGKPDAETLNVMKQPRCGVPDVA---------EFVLTEGNPRWEN---THLT 115
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + DV A + +FQ WS+V P+ FT++ + ADI I F GDH D
Sbjct: 116 YRIE--NYTPDLPRADVDQAIEKAFQLWSNVSPLTFTKVSE-GQADIMISFVRGDHRDNS 172
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD ETW + + +L VA HE GH LGL
Sbjct: 173 PFDGPGGNLAHAFQPGPRIGGDAHFDEDETWTSNFRN------YNLYRVAAHEFGHSLGL 226
Query: 259 AHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
+H++ A+MYP+ T V L DD+ G+QA+YG + N
Sbjct: 227 SHSTDIGALMYPNYF-FTGDVQLSQDDINGIQAIYGPSQN 265
>sp|P21692|MMP1_PIG Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2
Length = 469
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 104/220 (47%), Gaps = 43/220 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGK D+ET++ + PRCGV D + + G PRW LT
Sbjct: 68 QQFFGLKVTGKPDAETLNVMKQPRCGVPDVA---------EFVLTPGNPRWEN---THLT 115
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + DV A + +FQ WS+V P+ FT++ + ADI I F GDH D
Sbjct: 116 YRIE--NYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSE-GQADIMISFVRGDHRDNS 172
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD E W + +L VA HE+GH LGL
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRD------YNLYRVAAHELGHSLGL 226
Query: 259 AHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
+H++ A+MYP+ T V L DD++G+QA+YG + N
Sbjct: 227 SHSTDIGALMYPNYI-YTGDVQLSQDDIDGIQAIYGPSEN 265
>sp|P09237|MMP7_HUMAN Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1
Length = 267
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 118/264 (44%), Gaps = 54/264 (20%)
Query: 63 GMSELK-----KYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETIS 117
GMSEL+ Y RF YL S T + + +L+ Q GLP+TG L+S I
Sbjct: 26 GMSELQWEQAQDYLKRF-YLYDSETKNANSLEAKLKE----MQKFFGLPITGMLNSRVIE 80
Query: 118 TIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAF-SKTDMIDYIDLTDV 176
+ PRCGV D + YS F P+W + +TY S T + +I V
Sbjct: 81 IMQKPRCGVPDVA---------EYSLFPNSPKWTSK---VVTYRIVSYTRDLPHIT---V 125
Query: 177 KAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF--------------- 221
+ W IP++F ++ + +ADI IGF G HGD PF
Sbjct: 126 DRLVSKALNMWGKEIPLHFRKVV-WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGT 184
Query: 222 ------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSL-TP 274
HFD E W + S + ++ ATHE+GH LG+ H+S AVMYP+
Sbjct: 185 GLGGDAHFDEDERW-----TDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG 239
Query: 275 RTRKVDLKVDDVEGVQALYGSNPN 298
+ L DD++G+Q LYG N
Sbjct: 240 DPQNFKLSQDDIKGIQKLYGKRSN 263
>sp|Q9EPL5|MMP1A_MOUSE Interstitial collagenase A OS=Mus musculus GN=Mmp1a PE=2 SV=1
Length = 464
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTG D ET+ + PRCGV D + Y+ + PRW + LT
Sbjct: 65 QQLFGLKVTGNSDPETLRAMKKPRCGVPDVA---------PYAITHNNPRWTKTH---LT 112
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y S + Y+ V+ A +F+ WS V P+ F +++ + DI + F+ GDHGD
Sbjct: 113 Y--SILNYTPYLPKAVVEDAIARAFRVWSDVTPLTFQRVFE-EEGDIVLSFHRGDHGDNN 169
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF H+D ETW E+ +L V HE+GH LGL
Sbjct: 170 PFDGPNYKLAHTFQPGPGLGGDVHYDLDETWTNSSENF------NLFYVTAHELGHSLGL 223
Query: 259 AHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
H+S A+M+PS T T L DD+ +Q LYG +PN
Sbjct: 224 THSSDIGALMFPSYTWYTEDFVLNQDDINRIQDLYGPSPN 263
>sp|P23097|MMP13_RAT Collagenase 3 (Fragment) OS=Rattus norvegicus GN=Mmp13 PE=1 SV=1
Length = 466
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 123/253 (48%), Gaps = 55/253 (21%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q+ GL VTGKLD T+ + PRCGV D Y+ F PR ++ S LT
Sbjct: 67 QSFFGLDVTGKLDDPTLDIMRKPRCGVPDVGV---------YNVF---PRTLKWSQTNLT 114
Query: 160 YAFSKTDMIDY---IDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y I ++V+ AF+ +F+ WS V P+NFT I+D +ADI I F +HG
Sbjct: 115 YR-----IVNYTPDISHSEVEKAFRKAFKVWSDVTPLNFTRIHD-GTADIMISFGTKEHG 168
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD ETW S +L VA HE+GH
Sbjct: 169 DFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETW------TSSSKGYNLFIVAAHELGHS 222
Query: 256 LGLAHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYG---SNPNFKFSSLLESEN-- 309
LGL H+ A+M+P T + L DDV+G+Q+LYG +PN K E +
Sbjct: 223 LGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPEKCDPA 282
Query: 310 FSNDAI-ALKGRT 321
S DAI +L+G T
Sbjct: 283 LSLDAITSLRGET 295
>sp|P45452|MMP13_HUMAN Collagenase 3 OS=Homo sapiens GN=MMP13 PE=1 SV=1
Length = 471
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 140/309 (45%), Gaps = 62/309 (20%)
Query: 50 ARLLDAEMGSNITGMSELKKYFTRFGYLSLSY--TNFTDVFDTQLQSAVVS----YQTKL 103
R L G + +SE F YL Y TN + S++ Q+
Sbjct: 17 CRALPLPSGGDEDDLSEEDLQFAE-RYLRSYYHPTNLAGILKENAASSMTERLREMQSFF 75
Query: 104 GLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFS 163
GL VTGKLD T+ + PRCGV D Y+ F PR ++ S M LTY
Sbjct: 76 GLEVTGKLDDNTLDVMKKPRCGVPDVG---------EYNVF---PRTLKWSKMNLTYR-- 121
Query: 164 KTDMIDYI-DLT--DVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQP 220
+++Y D+T +V+ AFK +F+ WS V P+NFT ++D ADI I F +HGD P
Sbjct: 122 ---IVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHD-GIADIMISFGIKEHGDFYP 177
Query: 221 F---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLA 259
F HFD ETW S +L VA HE GH LGL
Sbjct: 178 FDGPSGLLAHAFPPGPNYGGDAHFDDDETW------TSSSKGYNLFLVAAHEFGHSLGLD 231
Query: 260 HTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYG---SNPNFKFSSLLES--ENFSND 313
H+ A+M+P T + L DDV+G+Q+LYG +PN K + + S D
Sbjct: 232 HSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLD 291
Query: 314 AI-ALKGRT 321
AI +L+G T
Sbjct: 292 AITSLRGET 300
>sp|O77656|MMP13_BOVIN Collagenase 3 OS=Bos taurus GN=MMP13 PE=2 SV=1
Length = 471
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 121/248 (48%), Gaps = 49/248 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q+ GL VTG+LD T+ + PRCGV D Y+ F PR ++ S M LT
Sbjct: 72 QSFFGLEVTGRLDDNTLDIMKKPRCGVPDVG---------EYNVF---PRTLKWSKMNLT 119
Query: 160 YAFSKTDMIDYI-DLT--DVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y DLT +V+ AF+ +F+ WS V P+NFT I++ +ADI I F +HG
Sbjct: 120 YR-----IVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHN-GTADIMISFGTKEHG 173
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD ETW S +L VA HE GH
Sbjct: 174 DFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETW------TSSSKGYNLFLVAAHEFGHS 227
Query: 256 LGLAHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYGSNPNFKFSSLLESENFSNDA 314
LGL H+ A+M+P T + L DDV+G+Q+LYG +S ++ + + +
Sbjct: 228 LGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPYSKHPKTPDKCDPS 287
Query: 315 IALKGRTS 322
++L TS
Sbjct: 288 LSLDAITS 295
>sp|O62806|MMP13_RABIT Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1
Length = 471
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 124/253 (49%), Gaps = 55/253 (21%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q+ GL VTGKLD T++ + PRCGV D Y+ F PR ++ S LT
Sbjct: 72 QSFFGLEVTGKLDDNTLAIMKQPRCGVPDVG---------EYNVF---PRTLKWSQTNLT 119
Query: 160 YAFSKTDMIDYI-DLT--DVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y DLT +V+ AFK +F+ WS V P+NFT I++ +ADI I F +HG
Sbjct: 120 YR-----IVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRIHN-GTADIMISFGTKEHG 173
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD ETW S +L VA HE GH
Sbjct: 174 DFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETW------TSSSKGYNLFLVAAHEFGHS 227
Query: 256 LGLAHTSVKEAVMYPSLTPRTR-KVDLKVDDVEGVQALYG---SNPNFKFSSLLES--EN 309
LGL H+ A+M+P T + L DDV+G+Q+LYG +PN K + +
Sbjct: 228 LGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPS 287
Query: 310 FSNDAI-ALKGRT 321
S DAI +L+G T
Sbjct: 288 LSLDAITSLRGET 300
>sp|P13943|MMP1_RABIT Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1
Length = 468
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 105/220 (47%), Gaps = 43/220 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGK D+ET+ + PRCGV D + ++ G PRW + LT
Sbjct: 67 QEFFGLKVTGKPDAETLKMMKQPRCGVPDVA---------QFVLTPGNPRWEQ---THLT 114
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + DV A + +FQ WS+V P+ FT++ ADI I F GDH D
Sbjct: 115 YRIE--NYTPDLSRADVDNAIEKAFQLWSNVTPLTFTKV-SKGQADIMISFVRGDHRDNS 171
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD + W D + +L VA HE+GH LGL
Sbjct: 172 PFDGPEGQLAHAFQPGLGIGGDVHFDEDDRWTKDFRN------YNLYRVAAHELGHSLGL 225
Query: 259 AHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
+H++ A+MYP+ + V L DD++G+QA+YG + N
Sbjct: 226 SHSTDIGALMYPNYM-FSGDVQLAQDDIDGIQAIYGPSQN 264
>sp|P07152|MMP10_RAT Stromelysin-2 OS=Rattus norvegicus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 50/225 (22%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q LGL +TGKLDS T+ + PRCGV D +S F G P+W + ++
Sbjct: 68 QKFLGLEMTGKLDSNTVEMMHKPRCGVPDVG---------GFSTFPGSPKWRKNH---IS 115
Query: 160 YAFSKTDMIDY-IDL--TDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y +DL V +A + + + W V P+ F+ I + ADI I F G+HG
Sbjct: 116 YR-----IVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRISE-GEADIMISFAVGEHG 169
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD E W++ +L VA HE+GH
Sbjct: 170 DFYPFDGVGQSLAHAYPPGPGFYGDAHFDDDEKWSL------GPSGTNLFLVAAHELGHS 223
Query: 256 LGLAHTSVKEAVMYPSLTPRTRKVDLKV--DDVEGVQALYGSNPN 298
LGL H++ KE++MYP T + ++++ DD+EG+Q+LYG+ P+
Sbjct: 224 LGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIEGIQSLYGARPS 268
>sp|P03957|MMP3_RAT Stromelysin-1 OS=Rattus norvegicus GN=Mmp3 PE=1 SV=1
Length = 475
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 120/260 (46%), Gaps = 51/260 (19%)
Query: 62 TGMSELKKYFTRFGYLSLSYTNFTDVFDTQ-LQSAVVSYQTKLGLPVTGKLDSETISTIM 120
GM L+KY + L FT D+ + + Q LGL +TGKLDS T+ +
Sbjct: 27 AGMEVLQKYLENYYGLEKDVKQFTKKKDSSPVVKKIQEMQKFLGLKMTGKLDSNTMELMH 86
Query: 121 SPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDY-IDL--TDVK 177
PRCGV D +S F G P+W + ++Y +++Y +DL V
Sbjct: 87 KPRCGVPDVG---------GFSTFPGSPKWRKNH---ISYR-----IVNYTLDLPRESVD 129
Query: 178 AAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF---------------- 221
+A + + + W V P+ F+ I + + ADI I F +HGD PF
Sbjct: 130 SAIERALKVWEEVTPLTFSRISEGE-ADIMISFAVEEHGDFIPFDGPGMVLAHAYAPGPG 188
Query: 222 -----HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRT 276
HFD E W D+ +L VA HE+GH LGL H++ EA+MYP T
Sbjct: 189 TNGDAHFDDDERWTDDV------TGTNLFLVAAHELGHSLGLFHSANAEALMYPVYKSST 242
Query: 277 --RKVDLKVDDVEGVQALYG 294
+ L DDV+G+Q+LYG
Sbjct: 243 DLARFHLSQDDVDGIQSLYG 262
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 104/220 (47%), Gaps = 43/220 (19%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTGK D+ET++ + PRCGV D + + GK W LT
Sbjct: 68 QKFFGLRVTGKPDAETLNVMKQPRCGVPDVA---------PFVLTPGKSCWEN---TNLT 115
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + DV A + +FQ WS+V P+ FT++ + ADI I F GDH D
Sbjct: 116 YRIE--NYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVRGDHRDNS 172
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD E W + + +L VA HE GH LGL
Sbjct: 173 PFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQDY------NLYRVAAHEFGHSLGL 226
Query: 259 AHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYGSNPN 298
AH++ A+MYPS T + V L DD++G+QA+YG + N
Sbjct: 227 AHSTDIGALMYPSYT-FSGDVQLSQDDIDGIQAIYGPSQN 265
>sp|O55123|MMP10_MOUSE Stromelysin-2 OS=Mus musculus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 112/243 (46%), Gaps = 48/243 (19%)
Query: 83 NFTDVFDTQLQSAVV----SYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHAT 138
N +F + S VV Q LGL +TGKLDS T+ + PRCGV D
Sbjct: 47 NEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPDVG-------- 98
Query: 139 KRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEI 198
+S F G P+W R+S +T D+ V +A + + + W V P+ F+ I
Sbjct: 99 -GFSTFPGSPKW-RKSHITYRIVNYTPDL----PRQSVDSAIEKALKVWEEVTPLTFSRI 152
Query: 199 YDYDSADIHIGFYHGDHGDGQPF---------------------HFDAAETWAVDMESVK 237
+ ADI I F G+HGD PF HFD E W +
Sbjct: 153 SE-GEADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDDEKWTL------ 205
Query: 238 SRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTRKVD--LKVDDVEGVQALYGS 295
+ +L VA HE+GH LGL H+ KE++MYP T + L DD+EG+Q+LYG+
Sbjct: 206 APSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIEGIQSLYGA 265
Query: 296 NPN 298
P+
Sbjct: 266 GPS 268
>sp|P34960|MMP12_MOUSE Macrophage metalloelastase OS=Mus musculus GN=Mmp12 PE=1 SV=3
Length = 473
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 111/231 (48%), Gaps = 53/231 (22%)
Query: 92 LQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWV 151
L+ + Q GL TG+LD+ T++ + PRCGV D Q + A + S RW+
Sbjct: 64 LKEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPDV---QHLRAVPQRS------RWM 114
Query: 152 RESPMTLTYAFS---KTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHI 208
+ Y ++ K + +DYI F+ +FQ WS V P+ F +++ D ADI I
Sbjct: 115 KRYLTYRIYNYTPDMKREDVDYI--------FQKAFQVWSDVTPLRFRKLHK-DEADIMI 165
Query: 209 GFYHGDHGDGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESV 247
F G HGD F HFD AETW KS +L V
Sbjct: 166 LFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETW------TKSFQGTNLFLV 219
Query: 248 ATHEIGHVLGLAHTSVKEAVMYPS---LTPRTRKVDLKVDDVEGVQALYGS 295
A HE+GH LGL H++ +++MYP+ L P T + L DD+ +Q+LYG+
Sbjct: 220 AVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFR--LSADDIRNIQSLYGA 268
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 119/269 (44%), Gaps = 45/269 (16%)
Query: 56 EMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDTQ--LQSAVVSYQTKLGLPVTGKLDS 113
E + G + LK Y GYL L Y + + LQSAV + Q G+PVTG LD
Sbjct: 74 EAEAPFAGQNWLKSY----GYL-LPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQ 128
Query: 114 ETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDL 173
TI + PRCGV D + KRY+ G+ +W ++ +TY+ + +
Sbjct: 129 TTIEWMKKPRCGVPDHPHLSRRRRNKRYA-LTGQ-KWRQKH---ITYSIH--NYTPKVGE 181
Query: 174 TDVKAAFKSSFQRWSSVIPVNFTEI------YDYDSADIHIGFYHGDHGDGQPF------ 221
D + A + +F W V P+ F E+ D ADI I F G HGD PF
Sbjct: 182 LDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGF 241
Query: 222 ---------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEA 266
HFD+ E W + + DL VA HE+GH LGL H+S A
Sbjct: 242 LAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGN---DLFLVAVHELGHALGLEHSSDPSA 298
Query: 267 VMYPSLT-PRTRKVDLKVDDVEGVQALYG 294
+M P T L DD++G+Q +YG
Sbjct: 299 IMAPFYQYMETHNFKLPQDDLQGIQKIYG 327
>sp|P50280|MMP7_RAT Matrilysin OS=Rattus norvegicus GN=Mmp7 PE=2 SV=1
Length = 267
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 99/219 (45%), Gaps = 46/219 (21%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GLP TGKL + + PRCGV D + +S P+W T+T
Sbjct: 66 QKFFGLPETGKLSPRVMEIMQKPRCGVPDVA---------EFSLMPNSPKWHSR---TVT 113
Query: 160 YAFSK--TDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGD 217
Y TD+ ++ V K + + WS IP+NF + + +ADI IGF GDHGD
Sbjct: 114 YRIVSYTTDLPRFL----VDQIVKRALRMWSMQIPLNFKRV-SWGTADIIIGFARGDHGD 168
Query: 218 GQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVL 256
PF HFD E W +S V+ VATHE+GH L
Sbjct: 169 NFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYWTDGEDS-----GVNFLFVATHELGHSL 223
Query: 257 GLAHTSVKEAVMYPSLTP-RTRKVDLKVDDVEGVQALYG 294
GL H+SV +VMYP+ + L DD+ G+Q LYG
Sbjct: 224 GLGHSSVPSSVMYPTYQGDHSEDFSLTKDDIAGIQKLYG 262
>sp|Q9H239|MMP28_HUMAN Matrix metalloproteinase-28 OS=Homo sapiens GN=MMP28 PE=2 SV=2
Length = 520
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 122/281 (43%), Gaps = 55/281 (19%)
Query: 53 LDAEMGSNITGMSELKK----YFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVT 108
LDA+ G EL+K + ++GYL+ T+ A+ ++Q LPV+
Sbjct: 20 LDAQPAER--GGQELRKEAEAFLEKYGYLNEQVPKAPT--STRFSDAIRAFQWVSQLPVS 75
Query: 109 GKLDSETISTIMSPRCGVSDTS---------------FRQKIHATKRYSYFYGKPRWVRE 153
G LD T+ + PRCGV+DT+ R K+ KR++ K W ++
Sbjct: 76 GVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMRRKKRFAKQGNK--WYKQ 133
Query: 154 SPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHG 213
L+Y + +++ V+ A +++FQ WS+V + F E ADI + F+ G
Sbjct: 134 H---LSYRL--VNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQG 188
Query: 214 DHGDG--------------------QPFHFDAAETWAVDMESVKSRVAVDLESVATHEIG 253
DH DG HFD E W S+ R +L V HEIG
Sbjct: 189 DHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERW-----SLSRRRGRNLFVVLAHEIG 243
Query: 254 HVLGLAHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQALYG 294
H LGL H+ A+M P R L DDV VQ+LYG
Sbjct: 244 HTLGLTHSPAPRALMAPYYKRLGRDALLSWDDVLAVQSLYG 284
>sp|Q63341|MMP12_RAT Macrophage metalloelastase OS=Rattus norvegicus GN=Mmp12 PE=2 SV=1
Length = 465
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 109/228 (47%), Gaps = 47/228 (20%)
Query: 92 LQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWV 151
L+ + Q GL VTG+LD+ T+ + + RCGV D Q + A + S RW+
Sbjct: 56 LEEKLQEMQQFFGLEVTGQLDTSTLKIMHTSRCGVPDV---QHLRAVPQRS------RWM 106
Query: 152 RESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFY 211
+ Y ++ DM DV F+ +FQ WS V P+ F +I+ ADI I F
Sbjct: 107 KRYLTYRIYNYT-PDM----KRADVDYIFQKAFQVWSDVTPLRFRKIHK-GEADITILFA 160
Query: 212 HGDHGDGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATH 250
GDHGD F HFD AETW KS +L VA H
Sbjct: 161 FGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETW------TKSFQGTNLFLVAVH 214
Query: 251 EIGHVLGLAHTSVKEAVMYPS---LTPRTRKVDLKVDDVEGVQALYGS 295
E+GH LGL H++ +++MYP+ L P T + L DD+ +Q+LYG+
Sbjct: 215 ELGHSLGLRHSNNPKSIMYPTYRYLHPNTFR--LSADDIHSIQSLYGA 260
>sp|O70138|MMP8_MOUSE Neutrophil collagenase OS=Mus musculus GN=Mmp8 PE=2 SV=2
Length = 465
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 66 ELKKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTK-----LGLPVTGKLDSETISTIM 120
E K T YL Y ++ F + + +V+ + K L TGKLD+ T+ +
Sbjct: 28 EEKNIKTAENYLRKFYNLPSNQFRSSRNATMVAEKLKEMQRFFSLAETGKLDAATMGIME 87
Query: 121 SPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAF 180
PRCGV D+ + G P+W + LTY + + +VK A
Sbjct: 88 MPRCGVPDSG---------DFLLTPGSPKWTHTN---LTYRI--INHTPQLSRAEVKTAI 133
Query: 181 KSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF------------------- 221
+ +F WS P+ FTEI ADI+I F DHGD PF
Sbjct: 134 EKAFHVWSVASPLTFTEILQ-GEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGG 192
Query: 222 --HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTRKV 279
HFD+ ETW D ++ +L VA HE GH LGL+H++ A+MYP+ R
Sbjct: 193 DAHFDSEETWTQDSKNY------NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPST 246
Query: 280 -DLKVDDVEGVQALYGSNPN 298
L DD+ G+Q +YG + N
Sbjct: 247 YSLPQDDINGIQTIYGPSDN 266
>sp|Q99PW6|MMP24_RAT Matrix metalloproteinase-24 OS=Rattus norvegicus GN=Mmp24 PE=2 SV=1
Length = 618
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 68 KKYFTRFGYLSLSYTNFTDVFDT--QLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCG 125
+ + +GYL L Y + + LQSAV + Q G+PVTG LD TI + PRCG
Sbjct: 55 QNWLKSYGYL-LPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCG 113
Query: 126 VSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQ 185
V D + KRY+ G+ +W ++ +TY+ + + D + A + +F
Sbjct: 114 VPDHPHLSRRRRNKRYA-LTGQ-KWRQKH---ITYSIH--NYTPKVGELDTRKAIRQAFD 166
Query: 186 RWSSVIPVNFTEI------YDYDSADIHIGFYHGDHGDGQPF------------------ 221
W V P+ F E+ D ADI I F G HGD PF
Sbjct: 167 VWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 226
Query: 222 ---HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLT-PRTR 277
HFD+ E W + + DL VA HE+GH LGL H++ A+M P T
Sbjct: 227 GDTHFDSDEPWTL---GNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETH 283
Query: 278 KVDLKVDDVEGVQALYG 294
L DD++G+Q +YG
Sbjct: 284 NFKLPQDDLQGIQKIYG 300
>sp|Q9R0S2|MMP24_MOUSE Matrix metalloproteinase-24 OS=Mus musculus GN=Mmp24 PE=1 SV=2
Length = 618
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 68 KKYFTRFGYLSLSYTNFTDVFDT--QLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCG 125
+ + +GYL L Y + + LQSAV + Q G+PVTG LD TI + PRCG
Sbjct: 55 QNWLKSYGYL-LPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCG 113
Query: 126 VSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQ 185
V D + KRY+ G+ +W ++ +TY+ + + D + A + +F
Sbjct: 114 VPDHPHLSRRRRNKRYA-LTGQ-KWRQKH---ITYSIH--NYTPKVGELDTRKAIRQAFD 166
Query: 186 RWSSVIPVNFTEI------YDYDSADIHIGFYHGDHGDGQPF------------------ 221
W V P+ F E+ D ADI I F G HGD PF
Sbjct: 167 VWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 226
Query: 222 ---HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLT-PRTR 277
HFD+ E W + + DL VA HE+GH LGL H++ A+M P T
Sbjct: 227 GDTHFDSDEPWTL---GNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETH 283
Query: 278 KVDLKVDDVEGVQALYG 294
L DD++G+Q +YG
Sbjct: 284 NFKLPQDDLQGIQKIYG 300
>sp|O13065|MMP18_XENLA Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1
Length = 467
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 105/224 (46%), Gaps = 49/224 (21%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q GL VTG LD +T+ + PRCGV D +YS W ++ LT
Sbjct: 68 QKFFGLKVTGTLDPKTVEVMEKPRCGVYDVG---------QYSTVAKSSAWQKKD---LT 115
Query: 160 YAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQ 219
Y + + DV+ A + +F+ WS V P+ FT IY+ + +DI I F GDH D
Sbjct: 116 YRI--LNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAGDHKDNS 172
Query: 220 PF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGL 258
PF HFD ETW K+ +L VA HE GH LGL
Sbjct: 173 PFDGSGGILAHAFQPGNGIGGDAHFDEDETW------TKTSEIYNLFLVAAHEFGHSLGL 226
Query: 259 AHTSVKEAVMYPSLT---PRTRKVDLKVDDVEGVQALYG--SNP 297
+H++ + A+MYP+ + P+T L DD+ +Q LYG SNP
Sbjct: 227 SHSTDQGALMYPTYSNTDPKT--FQLPQDDINAIQYLYGKSSNP 268
>sp|Q99542|MMP19_HUMAN Matrix metalloproteinase-19 OS=Homo sapiens GN=MMP19 PE=1 SV=1
Length = 508
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 41/270 (15%)
Query: 46 WYDFARLLDAEMGSNITGMSELKK--YFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKL 103
W F LL + + G++E+ Y +++GYL + + A+ ++Q
Sbjct: 7 WLGF--LLPMTVSGRVLGLAEVAPVDYLSQYGYLQKPLEGSNNFKPEDITEALRAFQEAS 64
Query: 104 GLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFS 163
LPV+G+LD T + + PRCG+ D F QK T +Y RW R+ +T F
Sbjct: 65 ELPVSGQLDDATRARMRQPRCGLED-PFNQK---TLKYLLLG---RW-RKKHLT----FR 112
Query: 164 KTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFY------------ 211
++ + +AA + +FQ WS+V P+ F E+ +ADI + F+
Sbjct: 113 ILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEV-QAGAADIRLSFHGRQSSYCSNTFD 171
Query: 212 -------HGDHGDGQPFHFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVK 264
H D + HFD E W + + V+L +A HE+GH LGL H+
Sbjct: 172 GPGRVLAHADIPELGSVHFDEDEFW-----TEGTYRGVNLRIIAAHEVGHALGLGHSRYS 226
Query: 265 EAVMYPSLTPRTRKVDLKVDDVEGVQALYG 294
+A+M P L DDV G+QALYG
Sbjct: 227 QALMAPVYEGYRPHFKLHPDDVAGIQALYG 256
>sp|P09238|MMP10_HUMAN Stromelysin-2 OS=Homo sapiens GN=MMP10 PE=1 SV=1
Length = 476
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 113/256 (44%), Gaps = 50/256 (19%)
Query: 68 KKYFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVS 127
++Y ++ L F + + Q LGL VTGKLD++T+ + PRCGV
Sbjct: 35 QQYLEKYYNLEKDVKQFRRKDSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGVP 94
Query: 128 DTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYI-DLTD--VKAAFKSSF 184
D +S F G P+W + LTY +++Y DL V +A + +
Sbjct: 95 DVG---------HFSSFPGMPKWRK---THLTYR-----IVNYTPDLPRDAVDSAIEKAL 137
Query: 185 QRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF---------------------HF 223
+ W V P+ F+ +Y+ ADI I F +HGD F HF
Sbjct: 138 KVWEEVTPLTFSRLYE-GEADIMISFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHF 196
Query: 224 DAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTRKVDLKV 283
D E W D +L VA HE+GH LGL H++ EA+MYP T ++
Sbjct: 197 DDDEKWTEDAS------GTNLFLVAAHELGHSLGLFHSANTEALMYPLYNSFTELAQFRL 250
Query: 284 --DDVEGVQALYGSNP 297
DDV G+Q+LYG P
Sbjct: 251 SQDDVNGIQSLYGPPP 266
>sp|Q28397|MMP3_HORSE Stromelysin-1 OS=Equus caballus GN=MMP3 PE=2 SV=1
Length = 477
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 117/269 (43%), Gaps = 45/269 (16%)
Query: 53 LDAEMGSNITGMSELKKYFTRFGYLSLSYTNFTDVFDT-QLQSAVVSYQTKLGLPVTGKL 111
LD + M L+ Y ++ L + D+ + + Q LGL VTGKL
Sbjct: 20 LDRSARDEDSNMDLLQDYLEKYYDLGKEMRQYVRRKDSGPIVKKIQEMQKFLGLKVTGKL 79
Query: 112 DSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYI 171
DS+T+ + RCGV D ++ F G P+W + +++ D +
Sbjct: 80 DSDTVEVMHKSRCGVPDVG---------HFTTFPGMPKWSKTHLTYRIVNYTQDLPRDAV 130
Query: 172 DLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHGDGQPF---------- 221
D +DV+ A K W V P+ F+ IY+ ADI I F +HGD PF
Sbjct: 131 D-SDVEKALKI----WEEVTPLTFSRIYE-GEADIMITFAVREHGDFFPFDGPGKVLAHA 184
Query: 222 -----------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYP 270
HFD E W D ++ VA HE+GH LGL H++ EA+MYP
Sbjct: 185 YPPGPGMNGDAHFDDDEHWTKDAS------GINFLLVAAHELGHSLGLYHSTNTEALMYP 238
Query: 271 --SLTPRTRKVDLKVDDVEGVQALYGSNP 297
+ +V L DDV G+Q+LYG P
Sbjct: 239 LYNTLKGPARVRLSQDDVTGIQSLYGPPP 267
>sp|Q5RES1|MMP14_PONAB Matrix metalloproteinase-14 OS=Pongo abelii GN=MMP14 PE=2 SV=1
Length = 582
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 128/306 (41%), Gaps = 40/306 (13%)
Query: 55 AEMGSNITGMSELKKYFTRFGYLSLS-YTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDS 113
A +GS + + + ++GYL T L +A+ + Q GL VTGK D+
Sbjct: 23 ASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLRVTGKADA 82
Query: 114 ETISTIMSPRCGVSDTSFRQKIHAT-KRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYID 172
+T+ + PRCGV D F +I A +R Y +W + + +T + +Y
Sbjct: 83 DTMKAMRRPRCGVPD-KFGAEIKANVRRKRYAIQGLKW-QHNEITFCIQNYTPKVGEYAT 140
Query: 173 LTDVKAAFKSSFQRWSSVIPVNFTEI-YDY------DSADIHIGFYHGDHGDGQPF---- 221
++ AF+ W S P+ F E+ Y Y AD+ I F G HGD PF
Sbjct: 141 YEAIRKAFRV----WESATPLRFREVPYAYIREGHEKQADVMIFFAEGFHGDSTPFDGEG 196
Query: 222 -----------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVK 264
HFD+AE W V E + D+ VA HE+GH LGL H+S
Sbjct: 197 GFLAHAYFPGPNIGGDTHFDSAEPWTVGNEDLNGN---DIFLVAVHELGHALGLEHSSDP 253
Query: 265 EAVMYPSLT-PRTRKVDLKVDDVEGVQALYGSNPNFKFSSLLESENFSNDAIALKGRTSK 323
A+M P T L DD G+Q LYGS F + S ++ K +
Sbjct: 254 SAIMAPFYQWMDTENFVLPEDDRRGIQQLYGSESGFPTKMPPQPRTTSRPSVPDKPKNPT 313
Query: 324 WTINSL 329
+ N+
Sbjct: 314 YGPNTC 319
>sp|O88766|MMP8_RAT Neutrophil collagenase OS=Rattus norvegicus GN=Mmp8 PE=2 SV=1
Length = 466
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 102/231 (44%), Gaps = 43/231 (18%)
Query: 90 TQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPR 149
T + + Q GLP TGK D+ TI + PRCGV D+ + G P+
Sbjct: 58 TMIAEKLKEMQRFFGLPETGKPDAATIEIMEKPRCGVPDSG---------DFLLTPGSPK 108
Query: 150 WVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIG 209
W LTY + + +VK + +F+ WS + FTE + ADI+I
Sbjct: 109 WTH---TNLTYRI--INHTPQMSKAEVKTEIEKAFKIWSVPSTLTFTETLE-GEADINIA 162
Query: 210 FYHGDHGDGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVA 248
F DHGD PF HFD+ ETW D ++ +L VA
Sbjct: 163 FVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDSEETWTQDSKN------YNLFLVA 216
Query: 249 THEIGHVLGLAHTSVKEAVMYPSLTPRTRKV-DLKVDDVEGVQALYGSNPN 298
HE GH LGL+H++ A+MYP+ R L DD+ G+Q +YG + N
Sbjct: 217 AHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSDN 267
>sp|P50281|MMP14_HUMAN Matrix metalloproteinase-14 OS=Homo sapiens GN=MMP14 PE=1 SV=3
Length = 582
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 118/276 (42%), Gaps = 40/276 (14%)
Query: 55 AEMGSNITGMSELKKYFTRFGYLSLS-YTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDS 113
A +GS + + + ++GYL T L +A+ + Q GL VTGK D+
Sbjct: 23 ASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADA 82
Query: 114 ETISTIMSPRCGVSDTSFRQKIHAT-KRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYID 172
+T+ + PRCGV D F +I A +R Y +W + + +T + +Y
Sbjct: 83 DTMKAMRRPRCGVPD-KFGAEIKANVRRKRYAIQGLKW-QHNEITFCIQNYTPKVGEYAT 140
Query: 173 LTDVKAAFKSSFQRWSSVIPVNFTEI-YDY------DSADIHIGFYHGDHGDGQPF---- 221
++ AF+ W S P+ F E+ Y Y ADI I F G HGD PF
Sbjct: 141 YEAIRKAFRV----WESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEG 196
Query: 222 -----------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVK 264
HFD+AE W V E + D+ VA HE+GH LGL H+S
Sbjct: 197 GFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN---DIFLVAVHELGHALGLEHSSDP 253
Query: 265 EAVMYPSLT-PRTRKVDLKVDDVEGVQALYGSNPNF 299
A+M P T L DD G+Q LYG F
Sbjct: 254 SAIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGF 289
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 104/225 (46%), Gaps = 50/225 (22%)
Query: 100 QTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWVRESPMTLT 159
Q LGL VTGK+DS+T++ + PRCGV D ++ F G P+W + LT
Sbjct: 68 QKFLGLEVTGKVDSDTLAMMRRPRCGVPDVG---------DFTTFPGMPKWRK---THLT 115
Query: 160 YAFSKTDMIDYI-DLTD--VKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFYHGDHG 216
Y +++Y DL V +A + + W V P+ F+ D ADI I F DHG
Sbjct: 116 YR-----IMNYTPDLPRDAVDSAIEKALNVWKEVTPLTFSRT-DEGEADIKISFAVRDHG 169
Query: 217 DGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHV 255
D PF HFD E W D +L VA HE+GH
Sbjct: 170 DFNPFDGPGNVLGHAYPPGPGIYGDAHFDDDEQWTSDTS------GTNLFLVAAHELGHS 223
Query: 256 LGLAHTSVKEAVMYP--SLTPRTRKVDLKVDDVEGVQALYGSNPN 298
LGL H++ A+MYP ++ + L DDV G+Q+LYG P+
Sbjct: 224 LGLFHSADPSALMYPVYNVLADLARFHLSQDDVNGIQSLYGGPPS 268
>sp|Q95220|MMP14_RABIT Matrix metalloproteinase-14 OS=Oryctolagus cuniculus GN=MMP14 PE=2
SV=2
Length = 582
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 119/273 (43%), Gaps = 40/273 (14%)
Query: 55 AEMGSNITGMSELKKYFTRFGYLSLS-YTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDS 113
A +GS + + + ++GYL T L +A+ + Q GL VTGK D+
Sbjct: 23 ASLGSAQSNSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADT 82
Query: 114 ETISTIMSPRCGVSDTSFRQKIHAT-KRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYID 172
+T+ + PRCGV D F +I A +R Y +W + + +T + +Y
Sbjct: 83 DTMKAMRRPRCGVPD-KFGAEIKANVRRKRYAIQGLKW-QHNEITFCIQNYTPKVGEYAT 140
Query: 173 LTDVKAAFKSSFQRWSSVIPVNFTEI-YDY------DSADIHIGFYHGDHGDGQPF---- 221
++ AF+ W S P+ F E+ Y Y ADI I F G HGD PF
Sbjct: 141 FEAIRKAFRV----WESATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDGEG 196
Query: 222 -----------------HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVK 264
HFD+AE W V E + D+ VA HE+GH LGL H++
Sbjct: 197 GFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN---DIFLVAVHELGHALGLEHSNDP 253
Query: 265 EAVMYPSLT-PRTRKVDLKVDDVEGVQALYGSN 296
A+M P T K L D+ G+Q LYGS
Sbjct: 254 SAIMAPFYQWMDTEKFLLPDDERRGIQQLYGSQ 286
>sp|Q10835|MMP13_XENLA Collagenase 3 (Fragment) OS=Xenopus laevis GN=mmp13 PE=2 SV=1
Length = 469
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 49/228 (21%)
Query: 92 LQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWV 151
+++ + Q+ GL VTGKL+ +T+ + PRCGV D +Y++F K +W
Sbjct: 62 IETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDVG---------QYNFFPRKLKWP 112
Query: 152 RESPMTLTYAFSKTDMIDY---IDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHI 208
R + LTY +++Y + ++V A K + + WS V P+NFT + +ADI +
Sbjct: 113 RNN---LTYR-----IVNYTPDLSTSEVDRAIKKALKVWSDVTPLNFTRLRT-GTADIMV 163
Query: 209 GFYHGDHGDGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESV 247
F +HGD PF HFD E ++ D + +L V
Sbjct: 164 SFGKKEHGDYYPFDGPDGLLAHAFPPGEKLGGDTHFDDDEMFSTDNK------GYNLFVV 217
Query: 248 ATHEIGHVLGLAHTSVKEAVMYPSLT-PRTRKVDLKVDDVEGVQALYG 294
A HE GH LGL H+ ++M+P T T + L DDV+G+Q LYG
Sbjct: 218 AAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQVLYG 265
>sp|Q10739|MMP14_RAT Matrix metalloproteinase-14 OS=Rattus norvegicus GN=Mmp14 PE=2 SV=2
Length = 582
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 112/257 (43%), Gaps = 40/257 (15%)
Query: 70 YFTRFGYLSLS-YTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSD 128
+ ++GYL T L +A+ + Q GL VTGK DS+T+ + PRCGV D
Sbjct: 38 WLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKADSDTMKAMRRPRCGVPD 97
Query: 129 TSFRQKIHAT-KRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRW 187
F +I A +R Y +W + + +T + +Y ++ AF+ W
Sbjct: 98 -KFGTEIKANVRRKRYAIQGLKW-QHNEITFCIQNYTPKVGEYATFEAIRKAFRV----W 151
Query: 188 SSVIPVNFTEI-YDY------DSADIHIGFYHGDHGDGQPF------------------- 221
S P+ F E+ Y Y ADI I F G HGD PF
Sbjct: 152 ESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGG 211
Query: 222 --HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLT-PRTRK 278
HFD+AE W V E + D+ VA HE+GH LGL H++ A+M P T
Sbjct: 212 DTHFDSAEPWTVQNEDLNGN---DIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
Query: 279 VDLKVDDVEGVQALYGS 295
L DD G+Q LYGS
Sbjct: 269 FVLPDDDRRGIQQLYGS 285
>sp|P39900|MMP12_HUMAN Macrophage metalloelastase OS=Homo sapiens GN=MMP12 PE=1 SV=1
Length = 470
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 117/262 (44%), Gaps = 60/262 (22%)
Query: 92 LQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDTSFRQKIHATKRYSYFYGKPRWV 151
++ + Q LGL VTG+LD+ T+ + +PRCGV D +H + G P W
Sbjct: 60 MKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCGVPD------VHHFREMP---GGPVW- 109
Query: 152 RESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSSVIPVNFTEIYDYDSADIHIGFY 211
R+ +T DM + DV A + +FQ WS+V P+ F++I + ADI + F
Sbjct: 110 RKHYITYRINNYTPDM----NREDVDYAIRKAFQVWSNVTPLKFSKI-NTGMADILVVFA 164
Query: 212 HGDHGDGQPF---------------------HFDAAETWAVDMESVKSRVAVDLESVATH 250
G HGD F HFD E W +L A H
Sbjct: 165 RGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTT------HSGGTNLFLTAVH 218
Query: 251 EIGHVLGLAHTSVKEAVMYPSLTPRTRKVD-----LKVDDVEGVQALYGS--------NP 297
EIGH LGL H+S +AVM+P+ + VD L DD+ G+Q+LYG NP
Sbjct: 219 EIGHSLGLGHSSDPKAVMFPTY----KYVDINTFRLSADDIRGIQSLYGDPKENQRLPNP 274
Query: 298 NFKFSSLLESENFSNDAIALKG 319
+ +L + N S DA+ G
Sbjct: 275 DNSEPALCDP-NLSFDAVTTVG 295
>sp|Q9XT90|MMP14_PIG Matrix metalloproteinase-14 OS=Sus scrofa GN=MMP14 PE=2 SV=1
Length = 580
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 113/261 (43%), Gaps = 40/261 (15%)
Query: 70 YFTRFGYLSLS-YTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSD 128
+ ++GYL T L +A+ + Q GL VTGK D++T+ + PRCGV D
Sbjct: 36 WLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPD 95
Query: 129 TSFRQKIHAT-KRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRW 187
F +I A +R Y +W + + +T + +Y ++ AF+ W
Sbjct: 96 -KFGAEIKANVRRKRYAIQGLKW-QHNEITFCIQNYTPKVGEYATFEAIRKAFRV----W 149
Query: 188 SSVIPVNFTEI-YDY------DSADIHIGFYHGDHGDGQPF------------------- 221
S P+ F E+ Y Y ADI I F G HGD PF
Sbjct: 150 ESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGG 209
Query: 222 --HFDAAETWAVDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLT-PRTRK 278
HFD+AE W V E + D+ VA HE+GH LGL H++ A+M P T
Sbjct: 210 DTHFDSAEPWTVRNEDLNGN---DIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 266
Query: 279 VDLKVDDVEGVQALYGSNPNF 299
L DD G+Q LYGS F
Sbjct: 267 FVLPDDDRRGIQQLYGSESGF 287
>sp|Q9JHI0|MMP19_MOUSE Matrix metalloproteinase-19 OS=Mus musculus GN=Mmp19 PE=2 SV=1
Length = 527
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 70 YFTRFGYLSLSYTNFTDVFDTQLQSAVVSYQTKLGLPVTGKLDSETISTIMSPRCGVSDT 129
Y ++GYL D + A+ ++Q GLP++G++D T + + PRCG+ D
Sbjct: 32 YLLQYGYLQKPLEGADDFRLEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED- 90
Query: 130 SFRQKIHATKRYSYFYGKPRWVRESPMTLTYAFSKTDMIDYIDLTDVKAAFKSSFQRWSS 189
F QK + +Y W +++ F ++ + L V+AA +F+ WSS
Sbjct: 91 PFNQK---SLKYLLLG---HWRKKN-----LTFRIFNVPSTLSLPRVRAALHQAFKYWSS 139
Query: 190 VIPVNFTEIYDYDSADIHIGFY-------------------HGDHGDGQPFHFDAAETWA 230
V P+ F E+ ADI + F+ H D + HFD E W
Sbjct: 140 VAPLTFREV-KAGWADIRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELW- 197
Query: 231 VDMESVKSRVAVDLESVATHEIGHVLGLAHTSVKEAVMYPSLTPRTRKVDLKVDDVEGVQ 290
+ + V+L +A HE+GH LGL H+ +A+M P L DDV G+Q
Sbjct: 198 ----TEGTYQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQPFFKLHPDDVAGIQ 253
Query: 291 ALYG 294
ALYG
Sbjct: 254 ALYG 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,051,703
Number of Sequences: 539616
Number of extensions: 4988695
Number of successful extensions: 12546
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 12097
Number of HSP's gapped (non-prelim): 157
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)