BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037542
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64825|LYK4_ARATH LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana GN=LYK4
PE=1 SV=1
Length = 612
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 3 DTFYSVSTNKYQNLTTYQSV----EVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQL-RNR 57
D++++++ + Q L+T Q++ V + + P G + P+ C CP Q+ +
Sbjct: 127 DSYFAIANDTLQGLSTCQALAKQNNVSSQSLFP-----GMRIVVPIRCACPTAKQINEDG 181
Query: 58 VNYLVSYVLQPSENLSSVASRFGIETQAIIDVN-----GNNIRPFDTLFVPVARLP 108
V YL+SY + + ++ ++ RFG+ET + N + + PF T+ +P+ P
Sbjct: 182 VKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMSFENSEVFPFTTILIPLVNPP 237
>sp|O22808|LYK5_ARATH Protein LYK5 OS=Arabidopsis thaliana GN=LYK5 PE=1 SV=1
Length = 664
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 3 DTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYLV 62
+T++SV+ + YQ L+T Q++ N + +L G + P+ C CP Q YL+
Sbjct: 137 ETYFSVANDTYQALSTCQAMMSQN-RYGERQLTPGLNLLVPLRCACPTAKQTTAGFKYLL 195
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVN---GNNIRPFDTLFVPVARLP 108
+Y++ +++S +A F + AI + N +NI F + VP+ P
Sbjct: 196 TYLVAMGDSISGIAEMFNSTSAAITEGNELTSDNIFFFTPVLVPLTTEP 244
>sp|O23006|LYM2_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis
thaliana GN=LYM2 PE=1 SV=1
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 3 DTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYLV 62
D V+T + L TY+ + VN P K+E+G F P+ C C D+ + V+Y
Sbjct: 116 DILSFVATEIFGGLVTYEKISEVNKIPDPNKIEIGQKFWIPLPCSC-DKLNGEDVVHY-- 172
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVNG 91
++V++ +L +A++FG + + +NG
Sbjct: 173 AHVVKLGSSLGEIAAQFGTDNTTLAQLNG 201
>sp|F4IB81|LYK3_ARATH LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana GN=LYK3
PE=2 SV=1
Length = 651
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 37 GDVFIFPVFCKCPDQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDVNG----N 92
G V + C C NYL+SYV +++ S++SRFG+ I DVNG +
Sbjct: 122 GAVVSVQLLCGCSSGLW-----NYLMSYVAMAGDSVQSLSSRFGVSMDRIEDVNGILNLD 176
Query: 93 NIRPFDTLFVPVARLP 108
NI D L++P+ +P
Sbjct: 177 NITAGDLLYIPLDSVP 192
>sp|Q9SGI7|LYK2_ARATH Protein LYK2 OS=Arabidopsis thaliana GN=LYK2 PE=2 SV=1
Length = 654
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 2 GDTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYL 61
GDTF SVS + Q LTT S+ NP KL + C CP Q + N ++L
Sbjct: 118 GDTFRSVSQS-LQGLTTCLSIREKNPHISEDKLGDNIKLRLAIRCSCP-QEGVSN-ASFL 174
Query: 62 VSYVLQPSENLSSVASRFGIETQAIIDVNG-NNIRPFDTLFVPVARLPE 109
V+Y + +++SS+A RF AI+ N + + P +P+ PE
Sbjct: 175 VTYPVGVRDSVSSLAVRFNTTEDAIVSANNKSGVVPLKPALIPLDHKPE 223
>sp|Q6NPN4|LYM3_ARATH LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis
thaliana GN=LYM3 PE=1 SV=1
Length = 423
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 3 DTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYLV 62
DT S++ + Y L + + ++V N + L+VG + P+ C C + T YL
Sbjct: 115 DTLGSIADSVYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYL- 173
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVNGN---NIRPFDTLFVPV 104
SYV++ + ++ +A RF + +VN +I P D L VP+
Sbjct: 174 SYVVRGIDTMAGIAKRFSTSVTDLTNVNAMGAPDINPGDILAVPL 218
>sp|A8R7E6|CERK1_ARATH Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1
PE=1 SV=1
Length = 617
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 3 DTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYLV 62
DT+ V+ + Y NLTT +S++ NP F T + + V C C D++ ++ V
Sbjct: 111 DTYERVAISNYANLTTMESLQARNP-FPATNIPLSATLNVLVNCSCGDESVSKD-FGLFV 168
Query: 63 SYVLQPSENLSSVASRFGIETQAI 86
+Y L+P ++LSS+A G+ +
Sbjct: 169 TYPLRPEDSLSSIARSSGVSADIL 192
>sp|Q93ZH0|LYM1_ARATH LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis
thaliana GN=LYM1 PE=1 SV=1
Length = 416
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 3 DTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYLV 62
D S++ + Y L + + ++ N P+ L+VG + P+ C C + T YL
Sbjct: 118 DNLGSIADSVYGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYL- 176
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVNGN---NIRPFDTLFVPVA 105
SYV++ + L +A R+ +++VN ++ D L VP++
Sbjct: 177 SYVVKEIDTLVGIARRYSTTITDLMNVNAMGAPDVSSGDILAVPLS 222
>sp|Q8H8C7|CEBIP_ORYSJ Chitin elicitor-binding protein OS=Oryza sativa subsp. japonica
GN=CEBIP PE=1 SV=1
Length = 356
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 3 DTFYSVSTNKYQNLTTYQSVEVVNPAFVPTKLEVGDVFIFPVFCKCPDQTQLRNRVNYLV 62
D +++ N + TYQ + N P K+ V P+ C C D+ + N ++ +
Sbjct: 119 DGLDAIARNVFNAFVTYQEIAAANNIPDPNKINVSQTLWIPLPCSC-DKEEGSNVMH--L 175
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVN 90
+Y + EN S++A+++G+ ++ N
Sbjct: 176 AYSVGKGENTSAIAAKYGVTESTLLTRN 203
>sp|P56956|C21AA_BACTU Pesticidal crystal protein cry21Aa OS=Bacillus thuringiensis
GN=cry21Aa PE=2 SV=1
Length = 1167
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 50 DQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDV 89
D+++L++ Y VS + SE+L V SR+G E ++D+
Sbjct: 820 DESKLKSNTRYTVSGFIAQSEHLEVVVSRYGKEVHDMLDI 859
>sp|Q8CMN2|SLE1_STAES N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sle1 PE=3 SV=1
Length = 324
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNNIRPFDTLFVPVARLPELKQPAVAPSSAPPS 123
Y ++ ++LSS+A+++G Q I+ +NG N + L P +L ++ A + S A S
Sbjct: 86 YTVKAGDSLSSIAAKYGTTYQKIMQLNGLN----NYLIFPGQKL-KVSGKATSSSRAKAS 140
Query: 124 RKTER 128
+ R
Sbjct: 141 GSSGR 145
>sp|Q5HRU2|SLE1_STAEQ N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=sle1 PE=3
SV=1
Length = 324
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNNIRPFDTLFVPVARLPELKQPAVAPSSAPPS 123
Y ++ ++LSS+A+++G Q I+ +NG N + L P +L ++ A + S A S
Sbjct: 86 YTVKAGDSLSSIAAKYGTTYQKIMQLNGLN----NYLIFPGQKL-KVSGKATSSSRAKAS 140
Query: 124 RKTER 128
+ R
Sbjct: 141 GSSGR 145
>sp|Q2H8T2|AMPP1_CHAGB Probable Xaa-Pro aminopeptidase P OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=AMPP PE=3 SV=1
Length = 624
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 56 NRVNYLVSYVLQPSENLSSVASRFGIETQAIIDVNGNNIRPFDTLF 101
N V Y + V Q S L S+ E+++ +D N I+P+DTLF
Sbjct: 218 NPVFYSYAIVTQDSATLYVDVSKLDDESRSYLDQNKVTIKPYDTLF 263
>sp|Q4L3C1|SLE1_STAHJ N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=sle1 PE=3 SV=1
Length = 329
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVNGNN 93
+Y ++ ++LSS+ASR+G + I+++NG N
Sbjct: 89 TYTVRAGDSLSSIASRYGTTYRHIMNLNGLN 119
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 63 SYVLQPSENLSSVASRFGIETQAIIDVNGNN 93
+Y ++ ++LSS+ASR+G Q I+ +NG N
Sbjct: 153 TYTVRYGDSLSSIASRYGTTYQHIMRLNGLN 183
>sp|P05519|CR4BA_BACTI Pesticidal crystal protein cry4Ba OS=Bacillus thuringiensis subsp.
israelensis GN=cry4Ba PE=1 SV=2
Length = 1136
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 38 DVFIFPVFC-KCPDQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDV 89
D IFP + + D+++L+ YLV + S+++ V SR+G E AI++V
Sbjct: 754 DGTIFPTYIFQKIDESKLKPYTRYLVRGFVGSSKDVELVVSRYGEEIDAIMNV 806
>sp|Q9Z7W1|Y593_CHLPN Uncharacterized protein CPn_0593/CP_0155/CPj0593/CpB0616
OS=Chlamydia pneumoniae GN=CPn_0593 PE=3 SV=1
Length = 362
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNG-NNIRPF 97
YV+Q ++L +A RFGI II NG N+ R F
Sbjct: 316 YVVQDGDSLWLIAKRFGIPMDKIIQKNGLNHHRLF 350
>sp|P16480|CR4AA_BACTI Pesticidal crystal protein cry4Aa OS=Bacillus thuringiensis subsp.
israelensis GN=cry4Aa PE=1 SV=1
Length = 1180
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 38 DVFIFPVFC-KCPDQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDV 89
D IFP + + D+++L+ YLV + S+++ V SR+G E AI++V
Sbjct: 798 DGTIFPTYIFQKIDESKLKPYTRYLVRGFVGSSKDVELVVSRYGEEIDAIMNV 850
>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=gpi16 PE=3 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 68 PSENLSSVASRFGIETQAIIDVNGNNIRPFDTLFVP 103
PSEN S + + GI QA++DV N R T F P
Sbjct: 224 PSENQSLASVKMGIIIQAVVDVERNGRRKGKTTFQP 259
>sp|P0AEZ7|MLTD_ECOLI Membrane-bound lytic murein transglycosylase D OS=Escherichia coli
(strain K12) GN=mltD PE=1 SV=1
Length = 452
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 50 DQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDVN---GNNIRPFDTLFV 102
D T L +RV Y ++ + LSS+ASR G+ T+ + N G+ ++P +L +
Sbjct: 334 DNTPLNSRV-----YTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTI 384
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 62 VSYVLQPSENLSSVASRFGIETQAIIDVNGN--NIRPFD--TLFVPVARLPE 109
++Y ++ ++LSS+A R G+ + ++ N + N++P D TLFV +P+
Sbjct: 400 ITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPD 451
>sp|P0AEZ8|MLTD_ECOL6 Membrane-bound lytic murein transglycosylase D OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=mltD PE=3
SV=1
Length = 452
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 50 DQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDVN---GNNIRPFDTLFV 102
D T L +RV Y ++ + LSS+ASR G+ T+ + N G+ ++P +L +
Sbjct: 334 DNTPLNSRV-----YTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTI 384
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 62 VSYVLQPSENLSSVASRFGIETQAIIDVNGN--NIRPFD--TLFVPVARLPE 109
++Y ++ ++LSS+A R G+ + ++ N + N++P D TLFV +P+
Sbjct: 400 ITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPD 451
>sp|Q2YVT4|SLE1_STAAB N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=sle1 PE=3 SV=1
Length = 335
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNNIRPFDTLFVPVARLPELKQPAVAPSSAPPS 123
Y +Q ++LS +AS++G Q I+ +NG + F+ + +LK A SS S
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNG-----LNNFFIYPGQ--KLKVTGNATSSNSAS 212
Query: 124 RKTERK 129
T +
Sbjct: 213 ATTTNR 218
>sp|Q65K99|YKUD_BACLD Putative L,D-transpeptidase YkuD OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=BLi01617 PE=3 SV=1
Length = 165
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 61 LVSYVLQPSENLSSVASRFGIETQAII----DVNGNNIRPFDTLFVPVARLPE 109
++ Y ++P E L S+A+ F QA++ +NG + ++ +P R P+
Sbjct: 1 MLMYQVKPGETLESIAADFRTTRQALLQANPGLNGGQVSAGQSIIIPGIRNPD 53
>sp|Q7A1T4|SLE1_STAAW N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain MW2) GN=sle1 PE=3 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|P0C1U7|SLE1_STAAU N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
GN=sle1 PE=4 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|Q6GC24|SLE1_STAAS N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain MSSA476) GN=sle1 PE=3 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|Q7A7E0|SLE1_STAAN N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain N315) GN=sle1 PE=1 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|Q5HIL2|SLE1_STAAC N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain COL) GN=sle1 PE=3 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|Q2G0U9|SLE1_STAA8 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain NCTC 8325) GN=sle1 PE=1 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|Q2FJH7|SLE1_STAA3 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus
(strain USA300) GN=sle1 PE=3 SV=1
Length = 334
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 64 YVLQPSENLSSVASRFGIETQAIIDVNGNN 93
Y +Q ++LS +AS++G Q I+ +NG N
Sbjct: 160 YTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
>sp|O60152|UBR1_SCHPO E3 ubiquitin-protein ligase ubr1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubr1 PE=3 SV=1
Length = 1958
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 24 VVNPAFVPTKL--EVGDVFIFPVFCKCPDQTQLRNRVNYLVSYVLQPSENLSSVASRFGI 81
V+N + KL VG+VF+ + +L N +NYL+S +L P S + +
Sbjct: 628 VLNVSLQVAKLCRHVGNVFMEL------NTNKLANAINYLISLILYPKARNESWTNTESL 681
Query: 82 ETQAIIDVNGNN-IRPFDTLFVPVA 105
T +D GN+ + +D PV+
Sbjct: 682 TTGITVDERGNSKLIEYDIALQPVS 706
>sp|Q45760|CR5AA_BACUD Pesticidal crystal protein cry5Aa OS=Bacillus thuringiensis subsp.
darmstadiensis GN=cry5Aa PE=2 SV=1
Length = 1385
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 44 VFCKCPDQTQLRNRVNYLVSYVLQPSENLSSVASRFGIETQAIIDV 89
+F K ++++L+ Y+VS + ++L V SR+G E Q ++ V
Sbjct: 1010 IFQKV-EESKLKPNTRYIVSGFIAHGKDLEIVVSRYGQEVQKVVQV 1054
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,330,783
Number of Sequences: 539616
Number of extensions: 1673363
Number of successful extensions: 4949
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4895
Number of HSP's gapped (non-prelim): 56
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)