BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037543
HSYTFLIKIMYMMQRRAKLNAVTPTIPMAIRAEKALEAIYVCCFGKELVEEEDERLLVTI
LRAVFPTVEQPEIERIVKDKARKVAEGSDETNVPESKPLPKEAVKQQMKDLEFLKQNSET

High Scoring Gene Products

Symbol, full name Information P value
PDE329
AT3G55250 		protein from Arabidopsis thaliana 3.6e-25

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037543
        (120 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100691 - symbol:PDE329 "AT3G55250" species:37...   286  3.6e-25   1


>TAIR|locus:2100691 [details] [associations]
            symbol:PDE329 "AT3G55250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0010027
            "thylakoid membrane organization" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] GO:GO:0005739
            GO:GO:0005634 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009941 EMBL:AL132954 EMBL:AY099793 EMBL:AY128909
            EMBL:AY173126 IPI:IPI00538620 PIR:T47664 RefSeq:NP_191085.1
            UniGene:At.27603 STRING:Q9M3C6 PaxDb:Q9M3C6 PRIDE:Q9M3C6
            EnsemblPlants:AT3G55250.1 GeneID:824691 KEGG:ath:AT3G55250
            TAIR:At3g55250 eggNOG:NOG268234 HOGENOM:HOG000029197
            InParanoid:Q9M3C6 OMA:NDIEFEE PhylomeDB:Q9M3C6
            ProtClustDB:CLSN2685277 ArrayExpress:Q9M3C6 Genevestigator:Q9M3C6
            Uniprot:Q9M3C6
        Length = 277

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 60/114 (52%), Positives = 76/114 (66%)

Query:     5 FLIKIMYMMQRRAKLNAVTPTIPMAIRAEKALEAIYVCCFGKXXXXXXXXXXXXTILRAV 64
             F+  +    QRRAKLN   PTIPM +R EKALE IY CCF +             +L AV
Sbjct:   162 FIALMTEARQRRAKLNIDAPTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAV 221

Query:    65 FPTVEQPEIERIVKDKARKVAEGSDETNVPESKPLPKEAVKQQMKDLEFLKQNS 118
             FP+VE+ EIERI+K+KA +V EG +E NV  +K LPKEA++ QMKDLEFL+Q +
Sbjct:   222 FPSVEKSEIERIIKEKATRVEEGGEEENVM-AKRLPKEAIQMQMKDLEFLQQQN 274


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.131   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      120       108   0.00091  102 3  11 22  0.42    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  491 (52 KB)
  Total size of DFA:  93 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.04u 0.18s 12.22t   Elapsed:  00:00:00
  Total cpu time:  12.04u 0.18s 12.22t   Elapsed:  00:00:00
  Start:  Tue May 21 00:39:51 2013   End:  Tue May 21 00:39:51 2013

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