Query         037545
Match_columns 383
No_of_seqs    151 out of 1926
Neff          10.9
Searched_HMMs 46136
Date          Fri Mar 29 13:20:58 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037545.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037545hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0158 Cytochrome P450 CYP3/C 100.0 1.1E-74 2.5E-79  519.1  34.4  379    1-383    82-498 (499)
  2 PLN02774 brassinosteroid-6-oxi 100.0 5.6E-71 1.2E-75  512.6  39.4  382    1-382    80-462 (463)
  3 PLN02500 cytochrome P450 90B1  100.0 9.8E-70 2.1E-74  508.2  38.5  377    1-382    92-488 (490)
  4 PLN02196 abscisic acid 8'-hydr 100.0 8.5E-68 1.8E-72  491.0  38.3  376    1-382    85-461 (463)
  5 PLN03141 3-epi-6-deoxocathaste 100.0 8.3E-68 1.8E-72  490.3  38.1  378    1-383    61-449 (452)
  6 PLN02169 fatty acid (omega-1)- 100.0 6.3E-68 1.4E-72  494.8  34.1  373    1-383    86-499 (500)
  7 KOG0156 Cytochrome P450 CYP2 s 100.0 1.8E-67 3.9E-72  479.6  35.7  357    1-361    76-463 (489)
  8 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-68 4.7E-73  495.0  29.5  376    1-383    87-495 (497)
  9 PLN02302 ent-kaurenoic acid ox 100.0 2.7E-66 5.9E-71  486.7  40.0  380    1-383    98-487 (490)
 10 PLN02738 carotene beta-ring hy 100.0 8.7E-67 1.9E-71  494.2  36.1  374    1-383   181-594 (633)
 11 PLN02290 cytokinin trans-hydro 100.0 1.1E-66 2.4E-71  491.0  36.3  375    1-383   110-514 (516)
 12 PLN02426 cytochrome P450, fami 100.0 1.5E-66 3.1E-71  484.9  35.1  374    1-383    89-499 (502)
 13 PLN02971 tryptophan N-hydroxyl 100.0 2.4E-66 5.1E-71  489.4  36.7  379    1-383   109-533 (543)
 14 PLN03195 fatty acid omega-hydr 100.0 5.5E-66 1.2E-70  485.9  34.5  380    1-383    81-515 (516)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0   1E-65 2.2E-70  451.3  32.7  375    1-383   104-517 (519)
 16 PLN02183 ferulate 5-hydroxylas 100.0 2.3E-65   5E-70  481.0  36.6  378    1-383    85-511 (516)
 17 PLN02987 Cytochrome P450, fami 100.0 8.8E-65 1.9E-69  469.4  39.6  377    1-383    84-468 (472)
 18 PLN00168 Cytochrome P450; Prov 100.0 3.6E-65 7.8E-70  480.0  37.3  380    1-383    87-516 (519)
 19 PTZ00404 cytochrome P450; Prov 100.0   9E-66   2E-70  481.1  32.7  375    1-383    78-482 (482)
 20 PLN02687 flavonoid 3'-monooxyg 100.0 5.5E-65 1.2E-69  478.5  36.0  379    1-383    83-508 (517)
 21 PLN03234 cytochrome P450 83B1; 100.0 1.1E-64 2.3E-69  475.9  36.1  379    1-383    78-498 (499)
 22 PLN00110 flavonoid 3',5'-hydro 100.0 1.1E-64 2.3E-69  474.0  35.9  379    1-383    80-496 (504)
 23 PLN02394 trans-cinnamate 4-mon 100.0 2.6E-64 5.7E-69  473.7  35.8  378    1-383    80-501 (503)
 24 PLN03018 homomethionine N-hydr 100.0 9.9E-64 2.1E-68  468.3  37.7  380    1-383    92-523 (534)
 25 PLN02655 ent-kaurene oxidase   100.0 4.8E-63   1E-67  459.9  37.9  375    1-383    49-463 (466)
 26 PF00067 p450:  Cytochrome P450 100.0 4.3E-64 9.4E-69  469.7  30.0  376    1-380    50-463 (463)
 27 PLN03112 cytochrome P450 famil 100.0   4E-63 8.6E-68  466.6  36.6  379    1-383    81-507 (514)
 28 PLN02936 epsilon-ring hydroxyl 100.0 2.9E-63 6.3E-68  463.4  35.3  374    1-383    66-481 (489)
 29 PLN02966 cytochrome P450 83A1  100.0 3.2E-63 6.9E-68  465.3  35.4  359    1-361    79-470 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 2.6E-60 5.6E-65  407.2  31.5  379    2-383    82-484 (486)
 31 COG2124 CypX Cytochrome P450 [ 100.0 3.5E-58 7.5E-63  417.7  31.6  348    1-382    54-409 (411)
 32 PLN02648 allene oxide synthase 100.0 4.3E-55 9.4E-60  402.0  22.8  344    1-364    79-465 (480)
 33 PF12554 MOZART1:  Mitotic-spin  80.3     5.9 0.00013   23.7   4.4   43  183-225     5-47  (48)
 34 PRK06789 flagellar motor switc  62.9     8.8 0.00019   25.5   2.6   39  252-290    21-62  (74)
 35 PF05952 ComX:  Bacillus compet  60.4     9.8 0.00021   23.7   2.3   21  207-227     5-25  (57)
 36 KOG3506 40S ribosomal protein   53.2     6.1 0.00013   24.0   0.6   11  324-334    12-22  (56)
 37 PHA03162 hypothetical protein;  49.5      12 0.00027   27.5   1.8   24  327-350     2-25  (135)
 38 PF12508 DUF3714:  Protein of u  46.9      15 0.00033   29.9   2.1   44  245-289    51-94  (200)
 39 PF05261 Tra_M:  TraM protein,   43.4 1.3E+02  0.0029   22.2   8.7   88  143-230    10-122 (127)
 40 PF09201 SRX:  SRX;  InterPro:   40.6      23  0.0005   26.5   2.0   23  331-353    18-40  (148)
 41 PF08780 NTase_sub_bind:  Nucle  40.3 1.2E+02  0.0026   22.5   5.9   60    4-67     45-108 (124)
 42 PF08492 SRP72:  SRP72 RNA-bind  35.6      24 0.00053   22.2   1.3    8  308-315    44-51  (59)
 43 PRK05933 type III secretion sy  35.3      39 0.00084   29.6   2.9   43  248-290   316-362 (372)
 44 PF02663 FmdE:  FmdE, Molybdenu  32.6      37 0.00081   25.5   2.2   22  331-352     5-26  (131)
 45 PF12444 Sox_N:  Sox developmen  32.0      39 0.00085   23.1   1.9   20  341-360    60-79  (84)
 46 PF14129 DUF4296:  Domain of un  30.7 1.8E+02  0.0039   19.9   7.1   51  180-230    29-79  (87)
 47 COG2101 SPT15 TATA-box binding  29.5      21 0.00046   28.0   0.4   32  306-337    36-70  (185)
 48 PF11227 DUF3025:  Protein of u  27.1      39 0.00084   27.7   1.5   19  293-311   193-211 (212)
 49 COG1886 FliN Flagellar motor s  25.9      67  0.0015   24.4   2.5   41  250-290    83-126 (136)
 50 PTZ00218 40S ribosomal protein  25.1      31 0.00068   21.2   0.5   14  325-338    11-26  (54)
 51 KOG2376 Signal recognition par  24.8      42  0.0009   32.1   1.5   32  296-334   575-606 (652)
 52 PF07849 DUF1641:  Protein of u  24.7      99  0.0022   17.8   2.5   19  205-223    13-31  (42)
 53 PF11922 DUF3440:  Domain of un  24.6   3E+02  0.0065   22.0   5.8   70    2-74     28-98  (181)
 54 PRK13467 F0F1 ATP synthase sub  23.7 1.4E+02   0.003   19.4   3.3   25  201-225    20-44  (66)
 55 PHA01327 hypothetical protein   22.1      53  0.0012   18.7   1.0   20   32-51     12-31  (49)
 56 PF14483 Cut8_M:  Cut8 dimerisa  22.0 1.5E+02  0.0033   16.7   2.8   18  206-223    17-35  (38)
 57 PRK13713 conjugal transfer pro  21.5 3.4E+02  0.0073   19.9   9.0   73  144-216     4-92  (118)
 58 PF04798 Baculo_19:  Baculoviru  20.7      21 0.00045   27.1  -1.0   20  323-343    60-79  (146)
 59 TIGR01260 ATP_synt_c ATP synth  20.7 1.7E+02  0.0036   18.4   3.1   25  201-225    10-34  (58)
 60 TIGR03779 Bac_Flav_CT_M Bacter  20.6      71  0.0015   29.3   2.0   44  246-290   255-298 (410)

No 1  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-74  Score=519.06  Aligned_cols=379  Identities=21%  Similarity=0.311  Sum_probs=312.0

Q ss_pred             CCHHHHHHHHhhCCCccccCc--hhhhhh-hhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhcc
Q 037545            1 MDPELNRYILMNEGKGLVPGY--PQSMLD-ILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNW   77 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~--~~~~~~-~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l   77 (383)
                      +|||++|+|+.+++.+|.++.  ...-.. .++..+++..+|+.||+.|..++|.|+..+++ .+.++++++++++++.+
T Consensus        82 ~D~elik~I~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk-~m~~t~~~~~~~l~~~l  160 (499)
T KOG0158|consen   82 SDPELIKEILIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLK-KMFPTMEEVGDELVRHL  160 (499)
T ss_pred             cCHHHHHHHHHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHH-HHHHHHHHHHHHHHHHH
Confidence            699999999999999999843  221111 23347899999999999999999999999999 99999999999999998


Q ss_pred             C--C---CcccHHHHHHHHHHHHHHHHHhcCCchhh---HhHHHHHHHHHhhc-----------cccccccCCC-cchhh
Q 037545           78 D--G---KDIDIQERTNEMALFISFKQIVEIESSQL---YETFKPEFDKLMVG-----------TLSLPVNIPG-TNYHR  137 (383)
Q Consensus        78 ~--~---~~vdl~~~~~~~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~~  137 (383)
                      .  .   ..+++.+.+.++++|||++++||.+.+..   ...+..........           ++.+|..... .....
T Consensus       161 ~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~  240 (499)
T KOG0158|consen  161 RRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLF  240 (499)
T ss_pred             HHhhcccCCccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccC
Confidence            6  2   37899999999999999999999876543   22333222222111           1111111000 00111


Q ss_pred             HHhhHHHHHHHHHHHHHHHHhCCCCcchHHHHHHhhhcC-------CCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 037545          138 GFQGRKRVVRILRQIMEERRASSIVHNDMLDHLLRKEES-------NYNLSDEETIDQVITILYSGYETVSTTLMMAIKY  210 (383)
Q Consensus       138 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~~~-------~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~  210 (383)
                      .....+.+.+.+...++.|..++..+.|+++.+++..++       ...++.++++++++.+++||.||||+|+++++|+
T Consensus       241 ~~~~~~~~~~~v~~~v~~R~~~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYe  320 (499)
T KOG0158|consen  241 PEDVTDFFRKLVNSRVEQREKENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYE  320 (499)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence            244557777788888888866666889999999998621       1159999999999999999999999999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccccccccccccccc-CEEeCCCCEEEe
Q 037545          211 LHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELN-GFVVPKGWRIYV  289 (383)
Q Consensus       211 L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~-g~~ip~G~~v~~  289 (383)
                      |++||++|+|||+||++++...   ..++++.+.+|+||++||+||||+||++|.+.|.|++|++++ ++.||||+.|.+
T Consensus       321 LA~~PdvQ~kLreEI~~~~~~~---~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~I  397 (499)
T KOG0158|consen  321 LAKNPDVQDKLREEIDEVLEEK---EGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMI  397 (499)
T ss_pred             HhcChHHHHHHHHHHHHHhccc---CCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEe
Confidence            9999999999999999997642   229999999999999999999999999999999999999999 999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCC-CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccc-c
Q 037545          290 YTREINYDPFLYPEPLTFSPWRWLDKGL-ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKIL-Q  366 (383)
Q Consensus       290 ~~~~~~~d~~~~~~p~~F~P~R~~~~~~-~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~-~  366 (383)
                      +++++||||++||||++|+||||++++. ..+++ |+|||.|||+|+|++||++|+|++|++||++|+++.++..... .
T Consensus       398 p~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~  477 (499)
T KOG0158|consen  398 PTYALHHDPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLE  477 (499)
T ss_pred             ecccccCCcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCccc
Confidence            9999999999999999999999998775 44566 9999999999999999999999999999999999998742222 1


Q ss_pred             c----ccccCCCCceEEEeeC
Q 037545          367 F----PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       367 ~----~~~~p~~~~~v~~~~r  383 (383)
                      .    .+..|++|+++++.+|
T Consensus       478 ~~~~~~~l~pk~gi~Lkl~~r  498 (499)
T KOG0158|consen  478 GDPKGFTLSPKGGIWLKLEPR  498 (499)
T ss_pred             CCccceeeecCCceEEEEEeC
Confidence            2    4578999999999987


No 2  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=5.6e-71  Score=512.62  Aligned_cols=382  Identities=76%  Similarity=1.290  Sum_probs=323.3

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhccC-C
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNWD-G   79 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l~-~   79 (383)
                      +||+++++++.++...|..++.....+.+|..++++.+|+.|+++|+++.+.|++..++..+.+.+.+.+++++++|. +
T Consensus        80 ~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (463)
T PLN02774         80 MDPELNRYILMNEGKGLVPGYPQSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGL  159 (463)
T ss_pred             eCHHHHHHHHcCCCCeEEecCCHHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            689999999988777776555444445667568888899999999999999999999872378999999999999987 5


Q ss_pred             CcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHHHHHhC
Q 037545           80 KDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIMEERRAS  159 (383)
Q Consensus        80 ~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  159 (383)
                      +++|+.+.+..+++++++.++||.......+.+...+..+......++.++|...+++..++++.+.+++.+.++++++.
T Consensus       160 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~  239 (463)
T PLN02774        160 KTIDIQEKTKEMALLSALKQIAGTLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRAS  239 (463)
T ss_pred             CCEEeeHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            78999999999999999999999865433344555555544444445556666555677778899999999999998876


Q ss_pred             CCCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCC
Q 037545          160 SIVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQRKKPEEPID  239 (383)
Q Consensus       160 ~~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  239 (383)
                      .....|+++.++....++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++...++..++
T Consensus       240 ~~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~  319 (463)
T PLN02774        240 GETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPID  319 (463)
T ss_pred             CCCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCC
Confidence            54567999999975433345899999999999999999999999999999999999999999999999986432235689


Q ss_pred             hhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 037545          240 WNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSPWRWLDKGLES  319 (383)
Q Consensus       240 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~  319 (383)
                      ++++++||||+|||+|+||++|+++.+.|.+.+|++++||.||||+.|+++.+.+||||++|+||++|+||||++.+...
T Consensus       320 ~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~  399 (463)
T PLN02774        320 WNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLES  399 (463)
T ss_pred             HHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCC
Confidence            99999999999999999999999998889999999999999999999999999999999999999999999999754322


Q ss_pred             CCccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCcccccccccCCCCceEEEee
Q 037545          320 HNYCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQFPRVEAPDGLRIRVSK  382 (383)
Q Consensus       320 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  382 (383)
                      .+.|+|||+|+|.|||++||++|++++++.|+++|+|++.+++....+++..|+++++|++++
T Consensus       400 ~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        400 HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccccCCCCCCCCCceEEeee
Confidence            334999999999999999999999999999999999999876543334666688999999986


No 3  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=9.8e-70  Score=508.20  Aligned_cols=377  Identities=33%  Similarity=0.680  Sum_probs=310.7

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhh-chHHHHHHHHHHHhccC-
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQ-LLPKIDKFMRSYLHNWD-   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~-~~~~i~~~~~~~l~~l~-   78 (383)
                      +||+++++++.+++..|..+++......+|+.++++.+|+.|+++|+++.+.|+..+++ . +.+.+.+.+..+++.|. 
T Consensus        92 ~~p~~~~~vl~~~~~~f~~~~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~-~~~~~~~~~~~~~~~~~~~~  170 (490)
T PLN02500         92 ADAGLNRFILQNEGRLFECSYPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLR-THLLKEVERHTLLVLDSWKE  170 (490)
T ss_pred             cCHHHHHHHHhCCCCeEEeeCchHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHH-HHHHHHHHHHHHHHHHHhCC
Confidence            69999999999888878665544444456645788889999999999999999999998 5 67888888888888887 


Q ss_pred             CCcccHHHHHHHHHHHHHHHHHhcCCchh-hHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHHHHH
Q 037545           79 GKDIDIQERTNEMALFISFKQIVEIESSQ-LYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIMEERR  157 (383)
Q Consensus        79 ~~~vdl~~~~~~~~~~~~~~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  157 (383)
                      ++.+|+.+.++.++++++++++||.+.+. ....+...+..+.......+.++|...+++..++.+.+.+++.+.+++++
T Consensus       171 ~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  250 (490)
T PLN02500        171 NSTFSAQDEAKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERI  250 (490)
T ss_pred             CCCEEehHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            66799999999999999999999986532 23334444444433322233345554456666778888888988888765


Q ss_pred             hC---C---CCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Q 037545          158 AS---S---IVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQR  231 (383)
Q Consensus       158 ~~---~---~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  231 (383)
                      +.   .   ....|+++.+++..    .++++++++++..+++||+|||+++++|++|+|++||++|+|+++|++++.+.
T Consensus       251 ~~~~~~~~~~~~~d~l~~ll~~~----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~  326 (490)
T PLN02500        251 EKLKEEDESVEEDDLLGWVLKHS----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARA  326 (490)
T ss_pred             HhhhcccCCCCcchHHHHHHhcc----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence            42   1   13468999999742    48999999999999999999999999999999999999999999999998742


Q ss_pred             C--CCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCC
Q 037545          232 K--KPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSP  309 (383)
Q Consensus       232 ~--~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  309 (383)
                      .  .....++.+|+.+||||+|||+|+||++|++|.++|.+.+|++++||.|||||+|+++.|++||||++|+||++|+|
T Consensus       327 ~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~P  406 (490)
T PLN02500        327 KKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNP  406 (490)
T ss_pred             cccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccCh
Confidence            1  11245899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC--------CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCcccccccccCCCCceEEE
Q 037545          310 WRWLDKGLE--------SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQFPRVEAPDGLRIRV  380 (383)
Q Consensus       310 ~R~~~~~~~--------~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  380 (383)
                      |||++++..        .+++ |+|||+|+|+|+|++||++|++++++.|+++|+|++.+++....++...+.++++|++
T Consensus       407 eRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~l~~~~  486 (490)
T PLN02500        407 WRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAFPFVDFPKGLPIRV  486 (490)
T ss_pred             hhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceecccccCCCCceEEE
Confidence            999975431        1345 9999999999999999999999999999999999998765443344445568999998


Q ss_pred             ee
Q 037545          381 SK  382 (383)
Q Consensus       381 ~~  382 (383)
                      ++
T Consensus       487 ~~  488 (490)
T PLN02500        487 RR  488 (490)
T ss_pred             Ee
Confidence            75


No 4  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.5e-68  Score=490.97  Aligned_cols=376  Identities=30%  Similarity=0.595  Sum_probs=317.2

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhccCCC
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNWDGK   80 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l~~~   80 (383)
                      +||+++++++.++...|+..++......+|+.++++.+|+.|+++||++.+.|++.++. .+.+.+.+++.++++.|.++
T Consensus        85 ~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~-~~~~~i~~~~~~~~~~~~~~  163 (463)
T PLN02196         85 SSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIR-NMVPDIESIAQESLNSWEGT  163 (463)
T ss_pred             cCHHHHHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHH-HHHHHHHHHHHHHHHcCCCC
Confidence            68999999998887777544332223356656889999999999999999999999999 99999999999999999867


Q ss_pred             cccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHHHHHhCC
Q 037545           81 DIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIMEERRASS  160 (383)
Q Consensus        81 ~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  160 (383)
                      .+|+.+.++.+++++++.++||.+.......+...+..+...+..++..+|....++..++++.+.+++.+.++++++..
T Consensus       164 ~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~  243 (463)
T PLN02196        164 QINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNG  243 (463)
T ss_pred             eEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            89999999999999999999998643222333333333322232344455554456677888999999999998887655


Q ss_pred             CCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCh
Q 037545          161 IVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDW  240 (383)
Q Consensus       161 ~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~  240 (383)
                      ....|+++.++..   +..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+..+....+++
T Consensus       244 ~~~~d~l~~ll~~---~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~  320 (463)
T PLN02196        244 SSHNDLLGSFMGD---KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTW  320 (463)
T ss_pred             CCcccHHHHHHhc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCH
Confidence            4567899998863   3358999999999999999999999999999999999999999999999998864433467899


Q ss_pred             hhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 037545          241 NEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSPWRWLDKGLESH  320 (383)
Q Consensus       241 ~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~  320 (383)
                      +++++||||+|||+|+||++|+++.+.|.+.+|++++||.|||||.|+++.+.+||||++|+||++|+||||++..  ..
T Consensus       321 ~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~--~~  398 (463)
T PLN02196        321 EDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP--KP  398 (463)
T ss_pred             HHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC--CC
Confidence            9999999999999999999999999889999999999999999999999999999999999999999999999632  22


Q ss_pred             CccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccccc-ccccCCCCceEEEee
Q 037545          321 NYCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQF-PRVEAPDGLRIRVSK  382 (383)
Q Consensus       321 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~~~p~~~~~v~~~~  382 (383)
                      ..++|||+|+|.|+|+++|++|++++++.|+++|+|++.+++....+ .+..|+++++|+++.
T Consensus       399 ~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        399 NTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGIQYGPFALPQNGLPIALSR  461 (463)
T ss_pred             CcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCceEEcccccCCCCceEEEec
Confidence            33999999999999999999999999999999999999876544454 567899999999864


No 5  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=8.3e-68  Score=490.30  Aligned_cols=378  Identities=35%  Similarity=0.729  Sum_probs=318.8

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhccC-C
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNWD-G   79 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l~-~   79 (383)
                      +||++++++|.+++..|..++.......+|..++++.+|+.|+++|+++.+.|+..++...+.+.+.+.++++++.|. +
T Consensus        61 ~~p~~~~~vl~~~~~~~~~~~~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  140 (452)
T PLN03141         61 TDAEVNKVVLQSDGNAFVPAYPKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDD  140 (452)
T ss_pred             eCHHHhhHHHhCCCCeeeccCchhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            689999999998888887665544445677567999999999999999999999888873457888888888888886 6


Q ss_pred             CcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHHHHHhC
Q 037545           80 KDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIMEERRAS  159 (383)
Q Consensus        80 ~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  159 (383)
                      +.+|+.+.+..+++++++.++||.+.+.....+...+..+...+..+|.++|.+.+++..++.+++.+++.+.|+++++.
T Consensus       141 ~~~~~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        141 PPVLVQDETKKIAFEVLVKALISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             CCEEhHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999999876444445555555555444445555666555666778899999999999887654


Q ss_pred             CC--------CcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Q 037545          160 SI--------VHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQR  231 (383)
Q Consensus       160 ~~--------~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  231 (383)
                      ..        ...|+++.++...  +..++++++..++..+++||+|||+++++|++++|++||++|+++++|++++.+.
T Consensus       221 ~~~~~~~~~~~~~d~l~~ll~~~--~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~  298 (452)
T PLN03141        221 MKNKEEDETGIPKDVVDVLLRDG--SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRL  298 (452)
T ss_pred             HhccCccccCChhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhc
Confidence            21        1468999999753  3458999999999999999999999999999999999999999999999988642


Q ss_pred             C-CCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCCC
Q 037545          232 K-KPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSPW  310 (383)
Q Consensus       232 ~-~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  310 (383)
                      . ..+..++.+++.+||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+.+||||++|+||++|+||
T Consensus       299 ~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~Pe  378 (452)
T PLN03141        299 KADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPW  378 (452)
T ss_pred             cCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcc
Confidence            1 123568999999999999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCcccccccccCCCCceEEEeeC
Q 037545          311 RWLDKGLESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQFPRVEAPDGLRIRVSKY  383 (383)
Q Consensus       311 R~~~~~~~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  383 (383)
                      ||++++.  .++ |+|||+|+|+|+|++||++|++++++.|+++|+|++.+++ .....++.|.+++.|++++|
T Consensus       379 Rfl~~~~--~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  449 (452)
T PLN03141        379 RWQEKDM--NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT-IVNFPTVRMKRKLPIWVTRI  449 (452)
T ss_pred             cccCCCC--CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC-eeecccccCCCCceEEEEeC
Confidence            9997532  344 9999999999999999999999999999999999987653 22236778989999999987


No 6  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=6.3e-68  Score=494.75  Aligned_cols=373  Identities=20%  Similarity=0.226  Sum_probs=295.7

Q ss_pred             CCHHHHHHHHhhCCCccccCchh-hhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhh-chHHHHHHHHHHHhccC
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQ-SMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQ-LLPKIDKFMRSYLHNWD   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~-~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~-~~~~i~~~~~~~l~~l~   78 (383)
                      +||+++++||.++...|.++... ...+.+| +|+++++|+.|+++||++++.|+..++... +.+.+.++++.+++.+.
T Consensus        86 ~dpe~i~~il~~~~~~~~k~~~~~~~~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~  164 (500)
T PLN02169         86 ADPKNIHHILSSNFGNYPKGPEFKKIFDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLD  164 (500)
T ss_pred             cCHHHHHHHHhhCcccCCCcHHHHHHHHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999887777765432 2234566 899999999999999999999999887621 23666677777766553


Q ss_pred             -----CCcccHHHHHHHHHHHHHHHHHhcCCchhh-----HhHHHHHHHHHhhc-----ccc-----ccccCCCcchhhH
Q 037545           79 -----GKDIDIQERTNEMALFISFKQIVEIESSQL-----YETFKPEFDKLMVG-----TLS-----LPVNIPGTNYHRG  138 (383)
Q Consensus        79 -----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~-----~~~~~~~~~~~~~~-----~~~-----~~~~~p~~~~~~~  138 (383)
                           ++.+|+.+.+.++++|++++++||.+.+..     ...+...+......     +..     ++.+++....++.
T Consensus       165 ~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  244 (500)
T PLN02169        165 NAAHENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKM  244 (500)
T ss_pred             HHHhcCCeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHH
Confidence                 567999999999999999999999765321     12333332222111     111     1112222234555


Q ss_pred             HhhHHHHHHHHHHHHHHHHhCC-------CCcchHHHHHHhhhcC----CCCCChHHHHHHHHHHHHhhhhhHHHHHHHH
Q 037545          139 FQGRKRVVRILRQIMEERRASS-------IVHNDMLDHLLRKEES----NYNLSDEETIDQVITILYSGYETVSTTLMMA  207 (383)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~~~~~-------~~~~d~l~~ll~~~~~----~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~  207 (383)
                      .++.+.+.+++.+.|+++++..       +...|+++.+++..++    +..++++++.+++.++++||+|||+++++|+
T Consensus       245 ~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~  324 (500)
T PLN02169        245 RTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWF  324 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHH
Confidence            6788899999999998876531       1236899999875421    1247888999999999999999999999999


Q ss_pred             HHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccc-cCEEeCCCCE
Q 037545          208 IKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIEL-NGFVVPKGWR  286 (383)
Q Consensus       208 l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l-~g~~ip~G~~  286 (383)
                      +|+|++||++|+|+++||++++         +.+++.+||||+|||+|||||||++|.+.|.+.+|.++ +||.|||||.
T Consensus       325 l~~La~~Pevq~kl~~Ei~~v~---------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~  395 (500)
T PLN02169        325 FWLLSKHPQVMAKIRHEINTKF---------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESK  395 (500)
T ss_pred             HHHHHCCHHHHHHHHHHHHhhC---------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCE
Confidence            9999999999999999998763         57899999999999999999999999988888877665 8999999999


Q ss_pred             EEeeccccccCCCCC-CCCCCCCCCCCCCCCCCC---CCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecC
Q 037545          287 IYVYTREINYDPFLY-PEPLTFSPWRWLDKGLES---HNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGG  361 (383)
Q Consensus       287 v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~~---~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~  361 (383)
                      |.+++|++||||++| +||++|+||||+++++..   .++ |+|||+|+|+|+|++||++|++++++.|+++|+|+++++
T Consensus       396 v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~  475 (500)
T PLN02169        396 IVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEG  475 (500)
T ss_pred             EEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCC
Confidence            999999999999999 899999999999754421   245 999999999999999999999999999999999999764


Q ss_pred             Ccc-ccc-ccccCCCCceEEEeeC
Q 037545          362 DKI-LQF-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       362 ~~~-~~~-~~~~p~~~~~v~~~~r  383 (383)
                      ... ... .+.+|+++++|++++|
T Consensus       476 ~~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        476 HKIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             CCcccccceEEecCCCEEEEEEeC
Confidence            322 122 5567889999999987


No 7  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-67  Score=479.61  Aligned_cols=357  Identities=22%  Similarity=0.345  Sum_probs=297.4

Q ss_pred             CCHHHHHHHHhhCCCccccCch-hhhhh-hh-cCCccccc-CchhHHHHHHH-HHhhcChHHHhhhchHHHHHHHHHHHh
Q 037545            1 MDPELNRYILMNEGKGLVPGYP-QSMLD-IL-GKCNIGAV-HGSAHKYIRGS-MMSLISPAMIKKQLLPKIDKFMRSYLH   75 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~-~~~~~-~~-g~~~i~~~-~g~~~~~~R~~-~~~~~~~~~l~~~~~~~i~~~~~~~l~   75 (383)
                      ||+++++|++.+++..|++|+. ..... +. |..+++++ +|+.|+.+||+ +...++...++ +......++++.+++
T Consensus        76 ss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~-~~~~~R~~E~~~l~~  154 (489)
T KOG0156|consen   76 SSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGK-SFMEIREEEVDELVK  154 (489)
T ss_pred             CCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhh-hhHHHHHHHHHHHHH
Confidence            6899999999999999999986 22323 33 45788776 99999999999 77788888888 777777999999888


Q ss_pred             ccC----CCcccHHHHHHHHHHHHHHHHHhcCCchhh----HhHHHHHHHHHhhc--------ccc-ccccCCCc-chhh
Q 037545           76 NWD----GKDIDIQERTNEMALFISFKQIVEIESSQL----YETFKPEFDKLMVG--------TLS-LPVNIPGT-NYHR  137 (383)
Q Consensus        76 ~l~----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~----~~~~~~~~~~~~~~--------~~~-~~~~~p~~-~~~~  137 (383)
                      .+.    +++||+...+..++.++|++++||.++...    ..++...+......        +.. +..+++.. ...+
T Consensus       155 ~l~~~~~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~  234 (489)
T KOG0156|consen  155 KLSKSKKGEPVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEK  234 (489)
T ss_pred             HHHhcCCCceeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHH
Confidence            876    268999999999999999999999887542    22233344333221        222 12233311 2333


Q ss_pred             H-HhhHHHHHHHHHHHHHHHHhCC--CCcchHHHHHHhhhc--CCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 037545          138 G-FQGRKRVVRILRQIMEERRASS--IVHNDMLDHLLRKEE--SNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLH  212 (383)
Q Consensus       138 ~-~~~~~~~~~~~~~~i~~~~~~~--~~~~d~l~~ll~~~~--~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~  212 (383)
                      . .....++..++++.|+++++..  +...|++|.+++..+  ....++++++.+.+..+++||+|||++|+.|++.+|+
T Consensus       235 ~~~~~~~~~~~~~~~~i~eh~~~~~~~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll  314 (489)
T KOG0156|consen  235 RLKKVSKRLDEFLERIIDEHREKIGDEEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELL  314 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence            3 4444569999999999987642  233899999999862  2222899999999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCEEEeec
Q 037545          213 DHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWRIYVYT  291 (383)
Q Consensus       213 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~v~~~~  291 (383)
                      +||++|+|+++||+++.|.   ++.++.+|+.+||||+|||+|++|++|++|+ ++|.+++|+.|+||.|||||.|.++.
T Consensus       315 ~~Pev~~K~qeEId~vvG~---~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~  391 (489)
T KOG0156|consen  315 NNPEVQKKLQEEIDEVVGK---GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNL  391 (489)
T ss_pred             hCHHHHHHHHHHHHHHhCC---CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEee
Confidence            9999999999999999985   3559999999999999999999999999998 89999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCC-CCCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecC
Q 037545          292 REINYDPFLYPEPLTFSPWRWLDKG-LESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGG  361 (383)
Q Consensus       292 ~~~~~d~~~~~~p~~F~P~R~~~~~-~~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~  361 (383)
                      |++||||++|+||++|+||||++++ ...... ++|||.|+|.|||..+|.+++.++++.|+++|+|++.++
T Consensus       392 ~ai~rDp~vw~dP~eF~PERFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  392 WAIHRDPKVWEDPEEFKPERFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             hhhhcCCccCCCccccChhhhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            9999999999999999999999974 323444 999999999999999999999999999999999999976


No 8  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-68  Score=495.03  Aligned_cols=376  Identities=28%  Similarity=0.435  Sum_probs=301.0

Q ss_pred             CCHHHHHHHHhhCCCcc--ccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhccC
Q 037545            1 MDPELNRYILMNEGKGL--VPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNWD   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~--~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l~   78 (383)
                      +||+.+++|+.++..+.  ...++....+++| .|+++.+|+.|+++||++.+.|+...++ .+.....+....++..+.
T Consensus        87 ~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~lG-~gll~~~g~~W~~~Rk~~~~~f~~~~L~-~~~~~~~~~~~~~~~~~~  164 (497)
T KOG0157|consen   87 TDPELIEEILKSSNENYPKGPDYPESLKPWLG-DGLLFSDGEKWHKHRKLLTPAFHFEILK-SFVPVFIESSLILLLLLE  164 (497)
T ss_pred             cCHHHHHHHHhcCcccCCCchhHHHHHHHHhc-CccccCCchHHHHHHhhccHhhhHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            69999999996444444  3334446667899 5999888999999999999999999999 888888777777666653


Q ss_pred             ----CCcccHHHHHHHHHHHHHHHHHhcCCc-hhh---HhHHHHHHHHHhhccccccccCC-------C-cchhhHHhhH
Q 037545           79 ----GKDIDIQERTNEMALFISFKQIVEIES-SQL---YETFKPEFDKLMVGTLSLPVNIP-------G-TNYHRGFQGR  142 (383)
Q Consensus        79 ----~~~vdl~~~~~~~~~~~~~~~~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~~~~~~  142 (383)
                          ++.+|+++.++++++|+++.++||... +.+   ...+...+..... ....+...|       . ...++..++.
T Consensus       165 ~~~~~~~vd~~~~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~a~  243 (497)
T KOG0157|consen  165 LAASGEEVDLQDLLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLTE-LISKRINLPLGTKFLYGLKSERKLKKAR  243 (497)
T ss_pred             HhhcCCeEcHHHHHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHHH-HHHHHHcCchhhhHHhhcchHHHHHHHH
Confidence                334999999999999999999999322 222   2233333332211 111111122       1 1345557788


Q ss_pred             HHHHHHHHHHHHHHHhC----C----CCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhC
Q 037545          143 KRVVRILRQIMEERRAS----S----IVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDH  214 (383)
Q Consensus       143 ~~~~~~~~~~i~~~~~~----~----~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  214 (383)
                      +.+.+++++.|++|++.    .    ....|+++.+.... + ..++++++.+++.++++||+|||+++++|++++|+.|
T Consensus       244 ~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~-~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~h  321 (497)
T KOG0157|consen  244 KILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEE-D-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKH  321 (497)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhc-c-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcC
Confidence            99999999999988852    1    23567888633322 2 6799999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccccccccccccccc-CEEeCCCCEEEeeccc
Q 037545          215 PRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELN-GFVVPKGWRIYVYTRE  293 (383)
Q Consensus       215 p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~-g~~ip~G~~v~~~~~~  293 (383)
                      |++|+++++|+.++++....  ..+..+.++|+||++||+||||||||+|.+.|.+.+|+.++ ||.||||+.|.+++|+
T Consensus       322 P~vq~k~~eEi~~i~~~~~~--~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~  399 (497)
T KOG0157|consen  322 PEVQEKLREEVDEILGNRDD--KWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYA  399 (497)
T ss_pred             HHHHHHHHHHHHHHhCCCCC--CCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHH
Confidence            99999999999999974322  12333333699999999999999999999999999999995 8999999999999999


Q ss_pred             cccCCCCCC-CCCCCCCCCCCCCCC--CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCc-cccc-
Q 037545          294 INYDPFLYP-EPLTFSPWRWLDKGL--ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDK-ILQF-  367 (383)
Q Consensus       294 ~~~d~~~~~-~p~~F~P~R~~~~~~--~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~-~~~~-  367 (383)
                      +||||.+|+ ||++||||||+++..  ..+++ |+|||+|+|+|+|++||++|+|+++++|+++|+|++..+.. ...+ 
T Consensus       400 ~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~  479 (497)
T KOG0157|consen  400 LHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPE  479 (497)
T ss_pred             hccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeE
Confidence            999999995 999999999996544  33466 99999999999999999999999999999999999988763 2223 


Q ss_pred             ccccCCCCceEEEeeC
Q 037545          368 PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       368 ~~~~p~~~~~v~~~~r  383 (383)
                      .+.+|..|++|++++|
T Consensus       480 ~~l~~~~gl~v~~~~r  495 (497)
T KOG0157|consen  480 LTLRPKNGLKVKLRPR  495 (497)
T ss_pred             EEEEecCCeEEEEEeC
Confidence            7889999999999987


No 9  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.7e-66  Score=486.72  Aligned_cols=380  Identities=31%  Similarity=0.604  Sum_probs=314.4

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcC-hHHHhhhchHHHHHHHHHHHhccC-
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLIS-PAMIKKQLLPKIDKFMRSYLHNWD-   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~-~~~l~~~~~~~i~~~~~~~l~~l~-   78 (383)
                      +||+++++++.++ ..|.++++......+|..+++..+|+.|+++|+++.+.|+ .++++ .+.+.+++.++++++.|. 
T Consensus        98 ~~pe~~~~vl~~~-~~f~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~-~~~~~i~~~v~~~~~~~~~  175 (490)
T PLN02302         98 TTPEACKRVLTDD-DAFEPGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALS-TYIPYIEENVKSCLEKWSK  175 (490)
T ss_pred             cCHHHHHHHHcCC-CccccCCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHH-HHHHHHHHHHHHHHHHhcC
Confidence            6899999999865 5666555443334567566777899999999999999995 67888 999999999999999987 


Q ss_pred             CCcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHHHHHh
Q 037545           79 GKDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIMEERRA  158 (383)
Q Consensus        79 ~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~  158 (383)
                      ++.+|+.+.++.++++++++++||.+.+...+.+...+......+..++..+|...+.+..++.+.+.+++.+.++++++
T Consensus       176 ~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~  255 (490)
T PLN02302        176 MGEIEFLTELRKLTFKIIMYIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRN  255 (490)
T ss_pred             CCCEehHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56799999999999999999999987644433443333333222222333445444556667778899999999988764


Q ss_pred             CC-----CCcchHHHHHHhhh-cCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcC
Q 037545          159 SS-----IVHNDMLDHLLRKE-ESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQRK  232 (383)
Q Consensus       159 ~~-----~~~~d~l~~ll~~~-~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  232 (383)
                      ..     ....|+++.+++.. +++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+..
T Consensus       256 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~  335 (490)
T PLN02302        256 SRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKR  335 (490)
T ss_pred             hhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Confidence            32     14578999999865 3344689999999999999999999999999999999999999999999999998642


Q ss_pred             CC-CCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCCCC
Q 037545          233 KP-EEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSPWR  311 (383)
Q Consensus       233 ~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  311 (383)
                      .. ...++++++++||||+|||+|+||++|+++..+|.+.+|++++||.||||+.|.++.+.+||||++|+||++|+|||
T Consensus       336 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR  415 (490)
T PLN02302        336 PPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSR  415 (490)
T ss_pred             CCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhh
Confidence            22 12379999999999999999999999999998999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccccc-ccccCCCCceEEEeeC
Q 037545          312 WLDKGLESHNYCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQF-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       312 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~~~p~~~~~v~~~~r  383 (383)
                      |++... ....++|||+|+|.|+|++||.+|++++++.|+++|+|++.+++....+ +...|.+++++++++|
T Consensus       416 ~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  487 (490)
T PLN02302        416 WDNYTP-KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKV  487 (490)
T ss_pred             cCCCCC-CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEec
Confidence            996542 2223999999999999999999999999999999999999876544444 6688999999999876


No 10 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8.7e-67  Score=494.25  Aligned_cols=374  Identities=18%  Similarity=0.328  Sum_probs=297.8

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhh-hhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhccC-
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLD-ILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNWD-   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~-~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l~-   78 (383)
                      +||+.+++||.+++..|.++....... ..| .++++.+|+.|+++|+++.+.|+...+. .+++.+.+.++++++.|. 
T Consensus       181 sDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g-~~l~~~dge~wr~rRr~l~p~Fs~~~v~-~l~~~i~~~v~~L~~~L~~  258 (633)
T PLN02738        181 SDPSIAKHILRDNSKAYSKGILAEILEFVMG-KGLIPADGEIWRVRRRAIVPALHQKYVA-AMISLFGQASDRLCQKLDA  258 (633)
T ss_pred             CCHHHHHHHHhhCcccCCCcchHHHHhhccC-CceecCCcHHHHHHHHhccHhhhHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            699999999997777676654433333 334 7888999999999999999999999998 999999999999998884 


Q ss_pred             ----CCcccHHHHHHHHHHHHHHHHHhcCCchh--hHhHHHHHHHHHhhc-----ccccccc-CCC----c-chhhHHhh
Q 037545           79 ----GKDIDIQERTNEMALFISFKQIVEIESSQ--LYETFKPEFDKLMVG-----TLSLPVN-IPG----T-NYHRGFQG  141 (383)
Q Consensus        79 ----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~-~p~----~-~~~~~~~~  141 (383)
                          ++.+|+...++.+++|+++.++||.+++.  ..+.+...+......     ...++.| +|.    . ..++..++
T Consensus       259 ~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~  338 (633)
T PLN02738        259 AASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEA  338 (633)
T ss_pred             HhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHH
Confidence                67899999999999999999999987642  122233322222111     1111111 111    1 11233334


Q ss_pred             HHHHHHHHHHHHHHHHh---C----------CCCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 037545          142 RKRVVRILRQIMEERRA---S----------SIVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAI  208 (383)
Q Consensus       142 ~~~~~~~~~~~i~~~~~---~----------~~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l  208 (383)
                      .+.+..++.+.++.+++   .          ...+.|+++.+++..   ..++++++.+++..+++||+|||+.+++|++
T Consensus       339 ~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~---~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l  415 (633)
T PLN02738        339 LKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG---DDVSSKQLRDDLMTMLIAGHETSAAVLTWTF  415 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC---CCCCHHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence            45555555555543221   0          113458999998753   3589999999999999999999999999999


Q ss_pred             HHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEE
Q 037545          209 KYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIY  288 (383)
Q Consensus       209 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~  288 (383)
                      |+|++||++|+||++|+++++++    ..++++++++||||+|||+|+|||+|+++.++|.+.+|.+++||.||+||.|.
T Consensus       416 ~~L~~~Pevq~kLreEl~~v~~~----~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~  491 (633)
T PLN02738        416 YLLSKEPSVVAKLQEEVDSVLGD----RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIF  491 (633)
T ss_pred             HHHHhCHHHHHHHHHHHHHhcCC----CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEE
Confidence            99999999999999999999862    56799999999999999999999999999988999999999999999999999


Q ss_pred             eeccccccCCCCCCCCCCCCCCCCCCCCC----CCCC-ccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCc
Q 037545          289 VYTREINYDPFLYPEPLTFSPWRWLDKGL----ESHN-YCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDK  363 (383)
Q Consensus       289 ~~~~~~~~d~~~~~~p~~F~P~R~~~~~~----~~~~-~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~  363 (383)
                      +++|.+||||++|+||++|+||||++...    ...+ +|+|||.|+|+|+|++||++|++++|+.|+++|+|++.++..
T Consensus       492 ~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~  571 (633)
T PLN02738        492 ISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP  571 (633)
T ss_pred             ecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC
Confidence            99999999999999999999999985321    1233 399999999999999999999999999999999999987643


Q ss_pred             cccc---ccccCCCCceEEEeeC
Q 037545          364 ILQF---PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       364 ~~~~---~~~~p~~~~~v~~~~r  383 (383)
                      ....   .+..|+++++|++++|
T Consensus       572 ~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        572 PVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             CcccccceEEeeCCCcEEEEEEC
Confidence            3333   4567889999999887


No 11 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.1e-66  Score=491.02  Aligned_cols=375  Identities=18%  Similarity=0.266  Sum_probs=301.1

Q ss_pred             CCHHHHHHHHhhCCCccccCc-hhh--hhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhcc
Q 037545            1 MDPELNRYILMNEGKGLVPGY-PQS--MLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNW   77 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~-~~~--~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l   77 (383)
                      +||+++++++.++.. +..+. ...  ....+| .++++++|+.|+++||++.+.|+..+++ .+.+.+.++++.+++.|
T Consensus       110 ~dp~~v~~il~~~~~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~-~~~~~i~~~~~~l~~~l  186 (516)
T PLN02290        110 TETELIKELLTKYNT-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLK-GYAGHMVECTKQMLQSL  186 (516)
T ss_pred             CCHHHHHHHHhcCCC-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHH-HHHHHHHHHHHHHHHHH
Confidence            699999999987743 33333 211  122456 7899999999999999999999999999 99999999999999998


Q ss_pred             C-----C-CcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHH---HHHhhc-c--cccc--ccCCCcchhhHHhhHH
Q 037545           78 D-----G-KDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEF---DKLMVG-T--LSLP--VNIPGTNYHRGFQGRK  143 (383)
Q Consensus        78 ~-----~-~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~---~~~~~~-~--~~~~--~~~p~~~~~~~~~~~~  143 (383)
                      .     + +.+|+.+.+..+++|++++++||.+.+.. +.+...+   ...... .  ..+|  .++|....++.....+
T Consensus       187 ~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~  265 (516)
T PLN02290        187 QKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG-KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKG  265 (516)
T ss_pred             HHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHH
Confidence            4     2 47899999999999999999999875322 1121221   111111 0  1111  1233222233445567


Q ss_pred             HHHHHHHHHHHHHHhCC------CCcchHHHHHHhhhc----CCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 037545          144 RVVRILRQIMEERRASS------IVHNDMLDHLLRKEE----SNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHD  213 (383)
Q Consensus       144 ~~~~~~~~~i~~~~~~~------~~~~d~l~~ll~~~~----~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~  213 (383)
                      .+.+++.+.|+++++..      ....|+++.+++..+    ++..++++++.+++.++++||+|||+++++|++|+|++
T Consensus       266 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~  345 (516)
T PLN02290        266 EVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLAS  345 (516)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            88888888888776421      134689999997541    22347899999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccc
Q 037545          214 HPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTRE  293 (383)
Q Consensus       214 ~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~  293 (383)
                      ||++|+|+++|+++++++    ..++.+++++||||+|||+||||++|+++.++|.+.+|++++||.|||||.|+++.+.
T Consensus       346 ~P~vq~kl~~Ei~~v~~~----~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~  421 (516)
T PLN02290        346 NPTWQDKVRAEVAEVCGG----ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLA  421 (516)
T ss_pred             CHHHHHHHHHHHHHHhCC----CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHH
Confidence            999999999999999873    3679999999999999999999999999989999999999999999999999999999


Q ss_pred             cccCCCCC-CCCCCCCCCCCCCCCCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccccc--ccc
Q 037545          294 INYDPFLY-PEPLTFSPWRWLDKGLESHNYCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQF--PRV  370 (383)
Q Consensus       294 ~~~d~~~~-~~p~~F~P~R~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~--~~~  370 (383)
                      +||||++| +||++|+||||++........|+|||+|+|+|+|++||++|++++++.|+++|+|++.++......  .+.
T Consensus       422 ~~rdp~~~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~  501 (516)
T PLN02290        422 IHHSEELWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTI  501 (516)
T ss_pred             hcCChhhhCCChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeee
Confidence            99999999 899999999999543212223999999999999999999999999999999999998865322222  567


Q ss_pred             cCCCCceEEEeeC
Q 037545          371 EAPDGLRIRVSKY  383 (383)
Q Consensus       371 ~p~~~~~v~~~~r  383 (383)
                      .|+++++|++++|
T Consensus       502 ~p~~~~~~~~~~~  514 (516)
T PLN02290        502 KPKYGVQVCLKPL  514 (516)
T ss_pred             cCCCCCeEEEEeC
Confidence            8999999999987


No 12 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.5e-66  Score=484.90  Aligned_cols=374  Identities=22%  Similarity=0.323  Sum_probs=302.4

Q ss_pred             CCHHHHHHHHhhCCCccccCc-hhh-hhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhc--hHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGY-PQS-MLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQL--LPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~-~~~-~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~--~~~i~~~~~~~l~~   76 (383)
                      +||+++++|+.++...|.+.. +.. ..+++| +|+++++|+.|+++||++++.|+..+++ .+  .+.+++..+.+++.
T Consensus        89 ~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-~gi~~~~g~~wk~~Rk~l~~~fs~~~l~-~~~~~~~~~~~~~~l~~~  166 (502)
T PLN02426         89 ANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-RGIFNVDGDSWRFQRKMASLELGSVSIR-SYAFEIVASEIESRLLPL  166 (502)
T ss_pred             cCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-CceeecCcHHHHHHHHHhHhhhhhHHHH-HHHHHHHHHHHHHHHHHH
Confidence            589999999998777776443 222 234567 7999999999999999999999999887 65  36777777777665


Q ss_pred             cC-------CCcccHHHHHHHHHHHHHHHHHhcCCchhh-----HhHHHHHHHHHhhc-----ccccc------ccCCCc
Q 037545           77 WD-------GKDIDIQERTNEMALFISFKQIVEIESSQL-----YETFKPEFDKLMVG-----TLSLP------VNIPGT  133 (383)
Q Consensus        77 l~-------~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~-----~~~~~~~~~~~~~~-----~~~~~------~~~p~~  133 (383)
                      +.       ++++|+.++++.+++|+++.++||.+.+..     ...+...+......     +..+|      .+++..
T Consensus       167 l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  246 (502)
T PLN02426        167 LSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIG  246 (502)
T ss_pred             HHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccc
Confidence            52       356999999999999999999999875421     22344444332110     11111      122222


Q ss_pred             chhhHHhhHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 037545          134 NYHRGFQGRKRVVRILRQIMEERRASSI-VHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLH  212 (383)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~  212 (383)
                      ..++..++.+.+.+++.+.|+++++... ...|+++.+++..     .+++++.+++.++++||+|||+++++|++|+|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~ll~~~-----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~  321 (502)
T PLN02426        247 SERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRFMASI-----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLS  321 (502)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHHHhcC-----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHh
Confidence            2345567788999999999998876432 4579999999753     378899999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccc-cCEEeCCCCEEEeec
Q 037545          213 DHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIEL-NGFVVPKGWRIYVYT  291 (383)
Q Consensus       213 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~  291 (383)
                      +||++|+||++|++++.+..  ...++++++++||||+|||+|+|||+||+|...|.+.+|.++ +|+.||+||.|.++.
T Consensus       322 ~~P~v~~kl~~Ei~~~~~~~--~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~  399 (502)
T PLN02426        322 KHPEVASAIREEADRVMGPN--QEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHP  399 (502)
T ss_pred             cCHHHHHHHHHHHHHhhCCC--CCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEch
Confidence            99999999999999987642  246899999999999999999999999999988999999887 899999999999999


Q ss_pred             cccccCCCCC-CCCCCCCCCCCCCCCC--CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCc-ccc
Q 037545          292 REINYDPFLY-PEPLTFSPWRWLDKGL--ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDK-ILQ  366 (383)
Q Consensus       292 ~~~~~d~~~~-~~p~~F~P~R~~~~~~--~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~-~~~  366 (383)
                      +.+||||++| +||++|+||||++++.  ..+++ ++|||+|+|.|+|+++|++|++++++.|+++|+++++++.. ...
T Consensus       400 ~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~  479 (502)
T PLN02426        400 YAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPR  479 (502)
T ss_pred             HHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCc
Confidence            9999999999 9999999999997432  22344 99999999999999999999999999999999999975432 223


Q ss_pred             c---ccccCCCCceEEEeeC
Q 037545          367 F---PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       367 ~---~~~~p~~~~~v~~~~r  383 (383)
                      +   .+.+|+++++|++++|
T Consensus       480 ~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        480 FAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             ccceeEEecCCCEEEEEEEc
Confidence            2   4578889999999886


No 13 
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.4e-66  Score=489.37  Aligned_cols=379  Identities=16%  Similarity=0.226  Sum_probs=296.5

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCC---cccccCchhHHHHHHHHHh-hcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKC---NIGAVHGSAHKYIRGSMMS-LISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~---~i~~~~g~~~~~~R~~~~~-~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||++++++|.+++..|.+++.......+|.+   +++..+|+.|+++||++.+ .+++.... .+.+.++++++.+++.
T Consensus       109 ~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~-~~~~~~~~~~~~l~~~  187 (543)
T PLN02971        109 TCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHR-WLHDNRAEETDHLTAW  187 (543)
T ss_pred             CCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHHH
Confidence            69999999999998889887654444445522   3677899999999999865 45555565 7888888888888776


Q ss_pred             c----C-CCcccHHHHHHHHHHHHHHHHHhcCCchh--------hHhHHHHHHHHHhhc----c-ccccccCCCc-----
Q 037545           77 W----D-GKDIDIQERTNEMALFISFKQIVEIESSQ--------LYETFKPEFDKLMVG----T-LSLPVNIPGT-----  133 (383)
Q Consensus        77 l----~-~~~vdl~~~~~~~~~~~~~~~~fG~~~~~--------~~~~~~~~~~~~~~~----~-~~~~~~~p~~-----  133 (383)
                      +    . ++++|+.+.+..++++++++++||.+...        ........+..+...    . ..++.++|..     
T Consensus       188 l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~  267 (543)
T PLN02971        188 LYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDL  267 (543)
T ss_pred             HHHhccCCCceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcc
Confidence            5    2 56799999999999999999999986421        011122222222211    1 1112223321     


Q ss_pred             -chh-hHHhhHHHHHHHHHHHHHHHHhC---CC--CcchHHHHHHhhhcC-CC-CCChHHHHHHHHHHHHhhhhhHHHHH
Q 037545          134 -NYH-RGFQGRKRVVRILRQIMEERRAS---SI--VHNDMLDHLLRKEES-NY-NLSDEETIDQVITILYSGYETVSTTL  204 (383)
Q Consensus       134 -~~~-~~~~~~~~~~~~~~~~i~~~~~~---~~--~~~d~l~~ll~~~~~-~~-~l~~~~~~~~~~~~~~ag~~tt~~~l  204 (383)
                       ... ....+.+.+..++.+.|+++++.   ..  ...|+++.+++..++ +. .++++++.+++.++++||+|||++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl  347 (543)
T PLN02971        268 NGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAV  347 (543)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHH
Confidence             112 23345567788888888776531   11  246999999986422 22 48999999999999999999999999


Q ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCC
Q 037545          205 MMAIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPK  283 (383)
Q Consensus       205 ~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~  283 (383)
                      +|++++|+.||++|+|+++||+++++.   ++.++++++.+||||+|||+|+||++|++|. ++|.+.+|++++||.|||
T Consensus       348 ~~~l~~La~~Pevq~kl~~EI~~v~g~---~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~Ipk  424 (543)
T PLN02971        348 EWAMAEMINKPEILHKAMEEIDRVVGK---ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPK  424 (543)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhCC---CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECC
Confidence            999999999999999999999999874   3678999999999999999999999999998 889999999999999999


Q ss_pred             CCEEEeeccccccCCCCCCCCCCCCCCCCCCCCCC----CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEE
Q 037545          284 GWRIYVYTREINYDPFLYPEPLTFSPWRWLDKGLE----SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEE  358 (383)
Q Consensus       284 G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~----~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~  358 (383)
                      ||+|++++|++||||++|+||++|+||||+++...    .+++ |+|||+|+|+|+|++||++|++++++.|+++|+|++
T Consensus       425 Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~  504 (543)
T PLN02971        425 GSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKL  504 (543)
T ss_pred             CCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEe
Confidence            99999999999999999999999999999975431    2344 999999999999999999999999999999999999


Q ss_pred             ecCCccccc----ccccCCCCceEEEeeC
Q 037545          359 VGGDKILQF----PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       359 ~~~~~~~~~----~~~~p~~~~~v~~~~r  383 (383)
                      .+++.....    ....-++++.|.+.+|
T Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (543)
T PLN02971        505 AGSETRVELMESSHDMFLSKPLVMVGELR  533 (543)
T ss_pred             CCCCCCcchhhhcCcccccccceeeeeec
Confidence            875433333    3231236788888776


No 14 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.5e-66  Score=485.93  Aligned_cols=380  Identities=20%  Similarity=0.284  Sum_probs=295.7

Q ss_pred             CCHHHHHHHHhhCCCccccCchh-hhh-hhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHH-HHHHHHHHhcc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQ-SML-DILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKI-DKFMRSYLHNW   77 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~-~~~-~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i-~~~~~~~l~~l   77 (383)
                      +||+++++||.++...|...... ... ..+| .++++.+|+.|+++||++++.|+..+++ .+.+.+ .+.++.+++.+
T Consensus        81 ~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~-~~~~~~~~~~~~~l~~~l  158 (516)
T PLN03195         81 ADPVNVEHVLKTNFANYPKGEVYHSYMEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLR-DFSTVVFREYSLKLSSIL  158 (516)
T ss_pred             cCHHHHHHHHhhCccccCCcHhHHHHHHHHhc-CeeeccCcHHHHHHHHhcchhhhHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            68999999998765556544221 122 2455 7899999999999999999999999998 888876 55566665544


Q ss_pred             C-----CCcccHHHHHHHHHHHHHHHHHhcCCchhh-----HhHHHHHHHHHhhcc---ccccc-----cCCCcchhhHH
Q 037545           78 D-----GKDIDIQERTNEMALFISFKQIVEIESSQL-----YETFKPEFDKLMVGT---LSLPV-----NIPGTNYHRGF  139 (383)
Q Consensus        78 ~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~~-----~~p~~~~~~~~  139 (383)
                      .     ++.+|+.++++.+++|+++.++||.+.+..     ...+...+.......   ...|.     +++....++..
T Consensus       159 ~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  238 (516)
T PLN03195        159 SQASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLS  238 (516)
T ss_pred             HHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHH
Confidence            2     567999999999999999999999865321     123333333221110   00011     11111112334


Q ss_pred             hhHHHHHHHHHHHHHHHHhCC--------CCcchHHHHHHhhhc-CCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 037545          140 QGRKRVVRILRQIMEERRASS--------IVHNDMLDHLLRKEE-SNYNLSDEETIDQVITILYSGYETVSTTLMMAIKY  210 (383)
Q Consensus       140 ~~~~~~~~~~~~~i~~~~~~~--------~~~~d~l~~ll~~~~-~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~  210 (383)
                      ++.+.+.+++.+.++++++..        ....|+++.+++..+ ++..++++++.+++.++++||+|||+++++|++|+
T Consensus       239 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~  318 (516)
T PLN03195        239 KSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYM  318 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHH
Confidence            566778888888887765421        134689999997542 23468999999999999999999999999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHhhcC-----------------CCCCCCChhhhhcChhHHHHHhhhhccCcCccccccccccc
Q 037545          211 LHDHPRALKELRDEHMAIRQRK-----------------KPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKD  273 (383)
Q Consensus       211 L~~~p~~~~~lr~Ei~~~~~~~-----------------~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~  273 (383)
                      |++||++|+||++|++++.+..                 +....++++++.+||||+|||+|+|||+||+|...|.+.+|
T Consensus       319 L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d  398 (516)
T PLN03195        319 IMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILED  398 (516)
T ss_pred             HhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccC
Confidence            9999999999999999987531                 01245899999999999999999999999999988888887


Q ss_pred             ccc-cCEEeCCCCEEEeeccccccCCCCC-CCCCCCCCCCCCCCCC--CCCCc-cccccCCCCCCcchHHHHHHHHHHHH
Q 037545          274 IEL-NGFVVPKGWRIYVYTREINYDPFLY-PEPLTFSPWRWLDKGL--ESHNY-CFVFGGGSRLCPGKELGIVQISTFLH  348 (383)
Q Consensus       274 ~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~--~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~  348 (383)
                      .++ +|+.|||||.|.++.+.+||||++| +||++|+||||++++.  ...++ |+|||+|+|+|+|++||++|++++++
T Consensus       399 ~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la  478 (516)
T PLN03195        399 DVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALA  478 (516)
T ss_pred             cCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHH
Confidence            666 8999999999999999999999999 9999999999996432  23444 99999999999999999999999999


Q ss_pred             HHHccceEEEecCCccccc---ccccCCCCceEEEeeC
Q 037545          349 YFVTRYRWEEVGGDKILQF---PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       349 ~l~~~~~~~~~~~~~~~~~---~~~~p~~~~~v~~~~r  383 (383)
                      .|+++|++++.++. ...+   .+..|.++++|++++|
T Consensus       479 ~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r  515 (516)
T PLN03195        479 LLCRFFKFQLVPGH-PVKYRMMTILSMANGLKVTVSRR  515 (516)
T ss_pred             HHHHhceeEecCCC-cceeeeeeEEecCCCEEEEEEeC
Confidence            99999999987543 2222   3467889999999987


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-65  Score=451.26  Aligned_cols=375  Identities=21%  Similarity=0.337  Sum_probs=312.2

Q ss_pred             CCHHHHHHHHhhCCCcccc--Cchhh--hhhhhc-CCcccccCchhHHHHHHHH-HhhcChHHHhhhchHHHHHHHHHHH
Q 037545            1 MDPELNRYILMNEGKGLVP--GYPQS--MLDILG-KCNIGAVHGSAHKYIRGSM-MSLISPAMIKKQLLPKIDKFMRSYL   74 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~--~~~~~--~~~~~g-~~~i~~~~g~~~~~~R~~~-~~~~~~~~l~~~~~~~i~~~~~~~l   74 (383)
                      .||++++.+|.+++...-.  .++..  ..++++ ..|+++.+|+.|.+.|..+ ...++++.++ .|.+.++..+++++
T Consensus       104 ~~p~d~E~v~r~EG~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~-~yl~~l~~V~~DF~  182 (519)
T KOG0159|consen  104 YNPDDVEKVFRNEGKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVR-RYLPQLNAVSDDFV  182 (519)
T ss_pred             eCHHHHHHHHhcCCCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHH-HHhhHHHHHHHHHH
Confidence            4899999999988765222  12211  123444 5899999999999999665 5556788888 99999999999999


Q ss_pred             hccC--------CCcccHHHHHHHHHHHHHHHHHhcCCch-------hhHhHHHHHHHHHhhc------cccccccCCCc
Q 037545           75 HNWD--------GKDIDIQERTNEMALFISFKQIVEIESS-------QLYETFKPEFDKLMVG------TLSLPVNIPGT  133 (383)
Q Consensus        75 ~~l~--------~~~vdl~~~~~~~~~~~~~~~~fG~~~~-------~~~~~~~~~~~~~~~~------~~~~~~~~p~~  133 (383)
                      +.+.        ..+.|+...+.++++..+|.++||.+.+       ++.+.+.+.+.+++..      ...+..+++..
T Consensus       183 ~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~  262 (519)
T KOG0159|consen  183 ERLRAQRDPERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTK  262 (519)
T ss_pred             HHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCCh
Confidence            9874        2367999999999999999999997654       3456666666666443      12233345666


Q ss_pred             chhhHHhhHHHHHHHHHHHHHHHHh----CCC---CcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHH
Q 037545          134 NYHRGFQGRKRVVRILRQIMEERRA----SSI---VHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMM  206 (383)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~i~~~~~----~~~---~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~  206 (383)
                      .|++..++.+.+.++....|++..+    +..   ...+++..++...    .++.+++...+..+++||.|||++++.|
T Consensus       263 ~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~----~l~~k~~~~~~~dll~aGvDTTs~tl~~  338 (519)
T KOG0159|consen  263 VWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRK----ELSRKDAKANVMDLLAAGVDTTSNTLLW  338 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHc----cCCHHHHHHHHHHHHHHhccchHHHHHH
Confidence            7888889998888888888876543    221   2234555555442    3899999999999999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCE
Q 037545          207 AIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWR  286 (383)
Q Consensus       207 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~  286 (383)
                      +||+|++||++|++|++|+..+.+..  ++.++.+++.+||||.||||||+||||.+|...|+..+|.+|+||.|||||.
T Consensus       339 ~Ly~LarnP~~Q~~L~~Ei~~~~p~~--~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~  416 (519)
T KOG0159|consen  339 ALYELARNPEVQQRLREEILAVLPSG--NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTL  416 (519)
T ss_pred             HHHHHhcChHHHHHHHHHHHhhCCCc--ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCe
Confidence            99999999999999999999998753  4788999999999999999999999999999999999999999999999999


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCCCC-CCCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCcc
Q 037545          287 IYVYTREINYDPFLYPEPLTFSPWRWLDKG-LESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKI  364 (383)
Q Consensus       287 v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~-~~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~  364 (383)
                      |.+..+.+.+||++|++|++|+|||||++. +..+++ ++|||.|+|+|+|++||.+|+.++|++|+++|+++...+ .+
T Consensus       417 V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~-~p  495 (519)
T KOG0159|consen  417 VVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE-EP  495 (519)
T ss_pred             EEEeehhhccChhhCCCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC-CC
Confidence            999999999999999999999999999988 677888 999999999999999999999999999999999999875 33


Q ss_pred             ccc---ccccCCCCceEEEeeC
Q 037545          365 LQF---PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       365 ~~~---~~~~p~~~~~v~~~~r  383 (383)
                      ..+   .+..|..++..+|++|
T Consensus       496 v~~~~~~il~P~~~l~f~f~~r  517 (519)
T KOG0159|consen  496 VEYVYRFILVPNRPLRFKFRPR  517 (519)
T ss_pred             ccceeEEEEcCCCCcceeeeeC
Confidence            333   6778989999999876


No 16 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.3e-65  Score=481.00  Aligned_cols=378  Identities=21%  Similarity=0.316  Sum_probs=296.9

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhh-hhc--CCcccccCchhHHHHHHH-HHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLD-ILG--KCNIGAVHGSAHKYIRGS-MMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~-~~g--~~~i~~~~g~~~~~~R~~-~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++|+.+++..|..++...... ..+  +.++++.+|+.|+++|++ +.++|+...++ .+.+.+ ++++.+++.
T Consensus        85 ~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~-~~~~~~-~~~~~~~~~  162 (516)
T PLN02183         85 SSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAE-SWASVR-DEVDSMVRS  162 (516)
T ss_pred             CCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHH-HHHHHH-HHHHHHHHH
Confidence            699999999998877777664422222 222  356788899999999998 68999999998 888865 578999998


Q ss_pred             cC---CCcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhcc--c----ccc--ccC-CCcchhhHHhhHHH
Q 037545           77 WD---GKDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGT--L----SLP--VNI-PGTNYHRGFQGRKR  144 (383)
Q Consensus        77 l~---~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~--~----~~~--~~~-p~~~~~~~~~~~~~  144 (383)
                      |.   ++++|+.+++..+++|+++.++||...+...+.+.+.+..+...+  .    .+|  .++ +...+++..++.+.
T Consensus       163 l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  242 (516)
T PLN02183        163 VSSNIGKPVNIGELIFTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKS  242 (516)
T ss_pred             HHhcCCCcEeHHHHHHHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHH
Confidence            84   678999999999999999999999876443344544444332211  1    111  111 11123455566777


Q ss_pred             HHHHHHHHHHHHHhC---C-------CCcchHHHHHHhhhcC------------CCCCChHHHHHHHHHHHHhhhhhHHH
Q 037545          145 VVRILRQIMEERRAS---S-------IVHNDMLDHLLRKEES------------NYNLSDEETIDQVITILYSGYETVST  202 (383)
Q Consensus       145 ~~~~~~~~i~~~~~~---~-------~~~~d~l~~ll~~~~~------------~~~l~~~~~~~~~~~~~~ag~~tt~~  202 (383)
                      +.+++.+.++++.+.   .       ....|+++.+++....            +..++++++..++..+++||+|||++
T Consensus       243 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~  322 (516)
T PLN02183        243 LDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVAS  322 (516)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHH
Confidence            888777777665421   1       1245899999975311            12589999999999999999999999


Q ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeC
Q 037545          203 TLMMAIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVP  282 (383)
Q Consensus       203 ~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip  282 (383)
                      +++|++|+|++||++|+|+++|++++++.   .+.++.+++.+||||+|||+|+|||+||+|...|.+.+|++++||.||
T Consensus       323 tl~~~l~~La~~Pevq~kl~~Ei~~v~~~---~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IP  399 (516)
T PLN02183        323 AIEWAMAELMKSPEDLKRVQQELADVVGL---NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIP  399 (516)
T ss_pred             HHHHHHHHHHhCHHHHHHHHHHHHHHcCC---CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEEC
Confidence            99999999999999999999999999863   356899999999999999999999999999988999999999999999


Q ss_pred             CCCEEEeeccccccCCCCCCCCCCCCCCCCCCCCCC---CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEE
Q 037545          283 KGWRIYVYTREINYDPFLYPEPLTFSPWRWLDKGLE---SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEE  358 (383)
Q Consensus       283 ~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~---~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~  358 (383)
                      |||+|.++.+.+||||++|+||++|+||||++++..   .+++ |+|||+|+|+|+|++||++|++++++.|+++|+|++
T Consensus       400 kGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~  479 (516)
T PLN02183        400 KRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWEL  479 (516)
T ss_pred             CCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEc
Confidence            999999999999999999999999999999975431   2344 999999999999999999999999999999999998


Q ss_pred             ecCCcc--cc----ccccc-CCCCceEEEeeC
Q 037545          359 VGGDKI--LQ----FPRVE-APDGLRIRVSKY  383 (383)
Q Consensus       359 ~~~~~~--~~----~~~~~-p~~~~~v~~~~r  383 (383)
                      .++...  ..    +.... +...+.+.+++|
T Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        480 PDGMKPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             CCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence            775321  21    12222 234666666655


No 17 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=8.8e-65  Score=469.41  Aligned_cols=377  Identities=36%  Similarity=0.674  Sum_probs=305.7

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhch-HHHHHHHHHHHhccCC
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLL-PKIDKFMRSYLHNWDG   79 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~-~~i~~~~~~~l~~l~~   79 (383)
                      +||+++++++.++...|..++......++|+.|+++++|+.|+++|+++.+.++...+. .+. ..+.+.++..++.|. 
T Consensus        84 ~~pe~~~~il~~~~~~f~~~~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~-  161 (472)
T PLN02987         84 ADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIK-DHLLLDIDRLIRFNLDSWS-  161 (472)
T ss_pred             eCHHHHHHHHhCCCceEEecCcHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHH-HHHHHHHHHHHHHHHHhhc-
Confidence            68999999999888888666554445666767899999999999999987755555555 433 234455555666663 


Q ss_pred             CcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHHHHHhC
Q 037545           80 KDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIMEERRAS  159 (383)
Q Consensus        80 ~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  159 (383)
                      +++++.+.+.+++++++++++||.+.+...+.+...+......+...+..+....+++..++++++.+++.+.++++++.
T Consensus       162 ~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~  241 (472)
T PLN02987        162 SRVLLMEEAKKITFELTVKQLMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKE  241 (472)
T ss_pred             cceehHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            57999999999999999999999866433333434444333322222111112345667788899999999999988754


Q ss_pred             C----CCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCC
Q 037545          160 S----IVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQRKKPE  235 (383)
Q Consensus       160 ~----~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  235 (383)
                      .    ....|+++.+++..   ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++.+..+..
T Consensus       242 ~~~~~~~~~d~l~~ll~~~---~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~  318 (472)
T PLN02987        242 EEEGAEKKKDMLAALLASD---DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDS  318 (472)
T ss_pred             hhccCcccccHHHHHHhcC---CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCC
Confidence            2    13578999999753   2489999999999999999999999999999999999999999999999987643333


Q ss_pred             CCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCCCCCCCC
Q 037545          236 EPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSPWRWLDK  315 (383)
Q Consensus       236 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~  315 (383)
                      ..++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.||+|+.|.++.+.+||||++|+||++|+||||++.
T Consensus       319 ~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  398 (472)
T PLN02987        319 YSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSN  398 (472)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCC
Confidence            56799999999999999999999999998889999999999999999999999999999999999999999999999975


Q ss_pred             CCC-CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccccc-ccccCCCCceEEEeeC
Q 037545          316 GLE-SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQF-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       316 ~~~-~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~~~p~~~~~v~~~~r  383 (383)
                      ... ..+. ++|||+|+|.|+|++||++|++++++.|+++|+|++.+++. ..+ ++..|.+++++++++|
T Consensus       399 ~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        399 SGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK-LVFFPTTRTQKRYPINVKRR  468 (472)
T ss_pred             CCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc-eeecccccCCCCceEEEEec
Confidence            432 2223 99999999999999999999999999999999999986653 343 6788989999999886


No 18 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.6e-65  Score=479.98  Aligned_cols=380  Identities=20%  Similarity=0.320  Sum_probs=302.3

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcC-Ccccc--cCchhHHHHHH-HHHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGK-CNIGA--VHGSAHKYIRG-SMMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~-~~i~~--~~g~~~~~~R~-~~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++++.+++..|..++......++|. .+++.  .+|+.|+++|| ++++.|+..+++ .+.+.+.++++.+++.
T Consensus        87 ~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~-~~~~~~~~~~~~l~~~  165 (519)
T PLN00168         87 ADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVR-LFAPARAWVRRVLVDK  165 (519)
T ss_pred             CCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHH-HHHHHHHHHHHHHHHH
Confidence            6999999999988888887765333334453 23444  68999999986 799999999999 9999999999999998


Q ss_pred             cC-----CCcccHHHHHHHHHHHHHHHHHhcCCchhh-HhHHHHHHHHHh---hccccccccCCC-------cchhhHHh
Q 037545           77 WD-----GKDIDIQERTNEMALFISFKQIVEIESSQL-YETFKPEFDKLM---VGTLSLPVNIPG-------TNYHRGFQ  140 (383)
Q Consensus        77 l~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~p~-------~~~~~~~~  140 (383)
                      |.     ++.+|+.+.+..++.++++.++||.+.+.. ...+...+....   .....+...+|.       ..+.+..+
T Consensus       166 l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  245 (519)
T PLN00168        166 LRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALA  245 (519)
T ss_pred             HHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHH
Confidence            85     346899999999999999999999876432 222222222221   111111111221       11233445


Q ss_pred             hHHHHHHHHHHHHHHHHhCC------C--------CcchHHHHHHhhh---cCCCCCChHHHHHHHHHHHHhhhhhHHHH
Q 037545          141 GRKRVVRILRQIMEERRASS------I--------VHNDMLDHLLRKE---ESNYNLSDEETIDQVITILYSGYETVSTT  203 (383)
Q Consensus       141 ~~~~~~~~~~~~i~~~~~~~------~--------~~~d~l~~ll~~~---~~~~~l~~~~~~~~~~~~~~ag~~tt~~~  203 (383)
                      +.+++.+++.+.++++++..      .        ...|+++.+++..   +++..++++++.+++.++++||+|||+++
T Consensus       246 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~  325 (519)
T PLN00168        246 LRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTA  325 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHH
Confidence            67788888888887765421      0        1458999999754   22346999999999999999999999999


Q ss_pred             HHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeC
Q 037545          204 LMMAIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVP  282 (383)
Q Consensus       204 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip  282 (383)
                      ++|++++|++||++|+|+++||++++++  ....++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||
T Consensus       326 l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip  403 (519)
T PLN00168        326 LQWIMAELVKNPSIQSKLHDEIKAKTGD--DQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIP  403 (519)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEEC
Confidence            9999999999999999999999999863  12568999999999999999999999999988 68999999999999999


Q ss_pred             CCCEEEeeccccccCCCCCCCCCCCCCCCCCCCCC-------CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccc
Q 037545          283 KGWRIYVYTREINYDPFLYPEPLTFSPWRWLDKGL-------ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRY  354 (383)
Q Consensus       283 ~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~-------~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~  354 (383)
                      |||+|.++++++||||++|+||++|+||||+++..       ..+++ |+|||+|+|+|+|++||++|++++|+.|+++|
T Consensus       404 kGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f  483 (519)
T PLN00168        404 KGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREF  483 (519)
T ss_pred             CCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999996421       12344 99999999999999999999999999999999


Q ss_pred             eEEEecCCc-ccc--c-ccccCCCCceEEEeeC
Q 037545          355 RWEEVGGDK-ILQ--F-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       355 ~~~~~~~~~-~~~--~-~~~~p~~~~~v~~~~r  383 (383)
                      +|++.++.. ...  . ....|.++++|++++|
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  516 (519)
T PLN00168        484 EWKEVPGDEVDFAEKREFTTVMAKPLRARLVPR  516 (519)
T ss_pred             cceeCCCCcCChhhhceeEEeecCCcEEEEEec
Confidence            999976532 111  2 3456678999999887


No 19 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=9e-66  Score=481.15  Aligned_cols=375  Identities=17%  Similarity=0.248  Sum_probs=295.8

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhh-h-hhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhccC
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSM-L-DILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNWD   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~-~-~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l~   78 (383)
                      +||+++++++.++...|..+..... . ..+| .|+++.+|+.|+++|+++.+.|+..+++ ++.+.+.+.++.+++.|.
T Consensus        78 ~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~-~~l~~~~g~~w~~~Rk~~~~~f~~~~l~-~~~~~i~~~~~~l~~~l~  155 (482)
T PTZ00404         78 SDPILIREMFVDNFDNFSDRPKIPSIKHGTFY-HGIVTSSGEYWKRNREIVGKAMRKTNLK-HIYDLLDDQVDVLIESMK  155 (482)
T ss_pred             CCHHHHHHHHHhcchhhcCCCCcceeeeeccC-CceeccChHHHHHHHHHHHHHHhhhccc-cHHHHHHHHHHHHHHHHH
Confidence            6999999999877666665432221 1 1234 7899999999999999999999999999 999999999999999873


Q ss_pred             -----CCcccHHHHHHHHHHHHHHHHHhcCCchhh-------HhHHHHHHHHHhhcccc------ccccCCCc--chhhH
Q 037545           79 -----GKDIDIQERTNEMALFISFKQIVEIESSQL-------YETFKPEFDKLMVGTLS------LPVNIPGT--NYHRG  138 (383)
Q Consensus        79 -----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~p~~--~~~~~  138 (383)
                           ++.+|+...+..+++|+++.++||.+.+..       ...+...+..+......      ++...|..  .....
T Consensus       156 ~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (482)
T PTZ00404        156 KIESSGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHT  235 (482)
T ss_pred             HHHhcCCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHH
Confidence                 567999999999999999999999865321       12344444433222110      11111110  11122


Q ss_pred             HhhHHHHHHHHHHHHHHHHhCC--CCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHH
Q 037545          139 FQGRKRVVRILRQIMEERRASS--IVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPR  216 (383)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~~~~~--~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  216 (383)
                      .++.+.+.+++.+.++++++..  ....|+++.+++..........+++++++..+++||+|||+++++|++|+|++||+
T Consensus       236 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  315 (482)
T PTZ00404        236 DKNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPE  315 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcH
Confidence            3455677888888777665532  23578999999864211112233488999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccc-cCEEeCCCCEEEeecccc
Q 037545          217 ALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIEL-NGFVVPKGWRIYVYTREI  294 (383)
Q Consensus       217 ~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~  294 (383)
                      +|+||++|++++.++   ...++++++++||||+|||+|+|||+|++|. ++|.+.+|+++ +||.|||||.|.++.+++
T Consensus       316 vq~kl~~Ei~~v~~~---~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~  392 (482)
T PTZ00404        316 IQEKAYNEIKSTVNG---RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSL  392 (482)
T ss_pred             HHHHHHHHHHHHhcC---CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHh
Confidence            999999999999874   2467999999999999999999999999997 79999999999 999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCcc-c--cc-ccc
Q 037545          295 NYDPFLYPEPLTFSPWRWLDKGLESHNYCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKI-L--QF-PRV  370 (383)
Q Consensus       295 ~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~-~--~~-~~~  370 (383)
                      ||||++|+||++|+||||+++.  ....|+|||+|+|+|+|++||++|++++++.|+++|+|+++++... .  .. .++
T Consensus       393 hrdp~~~~dP~~F~PeRwl~~~--~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  470 (482)
T PTZ00404        393 GRNEKYFENPEQFDPSRFLNPD--SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTL  470 (482)
T ss_pred             hCCccccCCccccCccccCCCC--CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceee
Confidence            9999999999999999998642  2233999999999999999999999999999999999998765322 1  22 334


Q ss_pred             cCCCCceEEEeeC
Q 037545          371 EAPDGLRIRVSKY  383 (383)
Q Consensus       371 ~p~~~~~v~~~~r  383 (383)
                      .| ++++|++++|
T Consensus       471 ~~-~~~~v~~~~R  482 (482)
T PTZ00404        471 KP-NKFKVLLEKR  482 (482)
T ss_pred             cC-CCceeeeecC
Confidence            54 7899999987


No 20 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=5.5e-65  Score=478.54  Aligned_cols=379  Identities=21%  Similarity=0.300  Sum_probs=305.7

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhh---cCCcccccCchhHHHHHHHHH-hhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDIL---GKCNIGAVHGSAHKYIRGSMM-SLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~---g~~~i~~~~g~~~~~~R~~~~-~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++++.+++..|.+++.......+   ++++++..+|+.|+++||++. +.|+..+++ .+.+.++++++++++.
T Consensus        83 ~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~-~~~~~i~~~~~~l~~~  161 (517)
T PLN02687         83 ASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALD-DFRHVREEEVALLVRE  161 (517)
T ss_pred             CCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHH-HhHHHHHHHHHHHHHH
Confidence            69999999999887888876543322222   335567778999999999998 899999999 9999999999999998


Q ss_pred             cC----CCcccHHHHHHHHHHHHHHHHHhcCCch-----hhHhHHHHHHHHHhhc--cc----ccc--ccCCCc-chhhH
Q 037545           77 WD----GKDIDIQERTNEMALFISFKQIVEIESS-----QLYETFKPEFDKLMVG--TL----SLP--VNIPGT-NYHRG  138 (383)
Q Consensus        77 l~----~~~vdl~~~~~~~~~~~~~~~~fG~~~~-----~~~~~~~~~~~~~~~~--~~----~~~--~~~p~~-~~~~~  138 (383)
                      |.    ++++|+.+.++.+++|+++..+||.+..     .....+...+..+...  ..    .+|  .+++.. ..++.
T Consensus       162 l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~  241 (517)
T PLN02687        162 LARQHGTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKM  241 (517)
T ss_pred             HHHhcCCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHH
Confidence            84    5679999999999999999999997642     1233444444443321  11    111  122111 12344


Q ss_pred             HhhHHHHHHHHHHHHHHHHhCC----CCcchHHHHHHhhhc------CCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 037545          139 FQGRKRVVRILRQIMEERRASS----IVHNDMLDHLLRKEE------SNYNLSDEETIDQVITILYSGYETVSTTLMMAI  208 (383)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~~~~~----~~~~d~l~~ll~~~~------~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l  208 (383)
                      .+..+.+.+++.+.++++++..    ....|+++.+++..+      ++..++++++.+++..+++||+|||+++++|++
T Consensus       242 ~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l  321 (517)
T PLN02687        242 KRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAI  321 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHH
Confidence            5567788888999998887542    245799999998642      234589999999999999999999999999999


Q ss_pred             HHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCEE
Q 037545          209 KYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWRI  287 (383)
Q Consensus       209 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~v  287 (383)
                      |+|++||++|+|+++|++++.+.   ...++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+||.|
T Consensus       322 ~~L~~~P~~~~kl~~Ei~~~~~~---~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v  398 (517)
T PLN02687        322 AELIRHPDILKKAQEELDAVVGR---DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATL  398 (517)
T ss_pred             HHHHhCHHHHHHHHHHHHHHcCC---CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEE
Confidence            99999999999999999999863   3568999999999999999999999999998 8999999999999999999999


Q ss_pred             EeeccccccCCCCCCCCCCCCCCCCCCCCCC------CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEec
Q 037545          288 YVYTREINYDPFLYPEPLTFSPWRWLDKGLE------SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVG  360 (383)
Q Consensus       288 ~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~------~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~  360 (383)
                      .++.+.+||||++|+||++|+||||++++..      ..++ |+|||+|+|+|+|++||++|++++++.|+++|+|++.+
T Consensus       399 ~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  478 (517)
T PLN02687        399 LVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELAD  478 (517)
T ss_pred             EEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCC
Confidence            9999999999999999999999999975321      2344 99999999999999999999999999999999999986


Q ss_pred             CCc--ccc----c-ccccCCCCceEEEeeC
Q 037545          361 GDK--ILQ----F-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       361 ~~~--~~~----~-~~~~p~~~~~v~~~~r  383 (383)
                      +..  ...    + ..+.|..++.+++++|
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        479 GQTPDKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             CCCcccCCcccccceeeecCCCeEEeeccC
Confidence            532  222    1 3344556788888776


No 21 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.1e-64  Score=475.91  Aligned_cols=379  Identities=17%  Similarity=0.258  Sum_probs=301.9

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhh---hhcCCcccccCchhHHHHHHH-HHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLD---ILGKCNIGAVHGSAHKYIRGS-MMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~---~~g~~~i~~~~g~~~~~~R~~-~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++|+.+++..|..++......   ..|....+...++.|+++|+. +.+.|++.++. ++.+.++++++++++.
T Consensus        78 ~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~-~~~~~i~~~~~~ll~~  156 (499)
T PLN03234         78 SSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVA-SFRPVREEECQRMMDK  156 (499)
T ss_pred             CCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHH-HhHHHHHHHHHHHHHH
Confidence            699999999998877887665432222   223222245678999999997 57999999999 9999999999999998


Q ss_pred             cC-----CCcccHHHHHHHHHHHHHHHHHhcCCchhh---HhHHHHHHHHHhhcc--ccccccCCC--------cchhhH
Q 037545           77 WD-----GKDIDIQERTNEMALFISFKQIVEIESSQL---YETFKPEFDKLMVGT--LSLPVNIPG--------TNYHRG  138 (383)
Q Consensus        77 l~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~p~--------~~~~~~  138 (383)
                      |.     ++.+|+.+.+..+++|++++++||.+.+..   ...+.+.+.......  ..+...+|.        ...++.
T Consensus       157 l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~  236 (499)
T PLN03234        157 IYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARL  236 (499)
T ss_pred             HHHhccCCCeEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHH
Confidence            83     568999999999999999999999876432   223333333222111  111111111        112455


Q ss_pred             HhhHHHHHHHHHHHHHHHHhCC---CCcchHHHHHHhhhcC---CCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 037545          139 FQGRKRVVRILRQIMEERRASS---IVHNDMLDHLLRKEES---NYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLH  212 (383)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~~~~~---~~~~d~l~~ll~~~~~---~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~  212 (383)
                      .++.+.+.+++.+.|+++++..   ....|+++.+++..++   +..++++++.+++..+++||+|||+++++|++|+|+
T Consensus       237 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~  316 (499)
T PLN03234        237 KKAFKELDTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLI  316 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence            6778899999999998876432   2356899988875422   235899999999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCEEEeec
Q 037545          213 DHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWRIYVYT  291 (383)
Q Consensus       213 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~v~~~~  291 (383)
                      +||++|+|+++|+++++++   ...++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.
T Consensus       317 ~~P~v~~kl~~Ei~~~~~~---~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~  393 (499)
T PLN03234        317 KYPEAMKKAQDEVRNVIGD---KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNA  393 (499)
T ss_pred             hCHHHHHHHHHHHHHHhCC---CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEeh
Confidence            9999999999999999863   3568999999999999999999999999998 57999999999999999999999999


Q ss_pred             cccccCCCCC-CCCCCCCCCCCCCCCCC----CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCC--c
Q 037545          292 REINYDPFLY-PEPLTFSPWRWLDKGLE----SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGD--K  363 (383)
Q Consensus       292 ~~~~~d~~~~-~~p~~F~P~R~~~~~~~----~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~--~  363 (383)
                      +.+||||++| +||++|+||||+++...    .++. |+|||+|+|+|+|+++|++|++++++.|+++|+|++.++.  .
T Consensus       394 ~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~  473 (499)
T PLN03234        394 WAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPE  473 (499)
T ss_pred             HhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCC
Confidence            9999999999 89999999999975431    2344 9999999999999999999999999999999999998752  2


Q ss_pred             cccc-----ccccCCCCceEEEeeC
Q 037545          364 ILQF-----PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       364 ~~~~-----~~~~p~~~~~v~~~~r  383 (383)
                      ....     ....|+..+++.+++|
T Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        474 DIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCcccccccccccCCCeEEEeecC
Confidence            1221     3345778888888876


No 22 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.1e-64  Score=473.96  Aligned_cols=379  Identities=19%  Similarity=0.263  Sum_probs=304.1

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhh-hh-hhc-CCcccccCchhHHHHHHHHH-hhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSM-LD-ILG-KCNIGAVHGSAHKYIRGSMM-SLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~-~~-~~g-~~~i~~~~g~~~~~~R~~~~-~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++++.++...|..++.... .. ..| +.++++.+|+.|+++|+++. +.|+..+++ .+.+.+.+++..+++.
T Consensus        80 ~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~-~~~~~i~~~~~~~~~~  158 (504)
T PLN00110         80 STPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALE-DWSQVRTVELGHMLRA  158 (504)
T ss_pred             CCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHH-HhhHHHHHHHHHHHHH
Confidence            6999999999988778877654332 11 233 35677889999999999987 479999998 9999999998888877


Q ss_pred             cC-----CCcccHHHHHHHHHHHHHHHHHhcCCc-h---hhHhHHHHHHHHHhhc--cc----ccc--ccCCCcch-hhH
Q 037545           77 WD-----GKDIDIQERTNEMALFISFKQIVEIES-S---QLYETFKPEFDKLMVG--TL----SLP--VNIPGTNY-HRG  138 (383)
Q Consensus        77 l~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~-~---~~~~~~~~~~~~~~~~--~~----~~~--~~~p~~~~-~~~  138 (383)
                      +.     ++++|+.+.+..+++|+++.++||.+. +   ...+.+...+......  ..    .+|  .+++.... ++.
T Consensus       159 l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~  238 (504)
T PLN00110        159 MLELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGM  238 (504)
T ss_pred             HHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHH
Confidence            62     678999999999999999999999754 1   1233455544443221  11    111  11121111 333


Q ss_pred             HhhHHHHHHHHHHHHHHHHhCC---CCcchHHHHHHhhh--cCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 037545          139 FQGRKRVVRILRQIMEERRASS---IVHNDMLDHLLRKE--ESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHD  213 (383)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~~~~~---~~~~d~l~~ll~~~--~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~  213 (383)
                      .+..+.+.+++.+.++++++..   ..+.|+++.+++..  +++..++++++.+++..+++||+|||+++++|++++|++
T Consensus       239 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~  318 (504)
T PLN00110        239 KHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLK  318 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHh
Confidence            4456778888888887776532   13468999999754  234469999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCEEEeecc
Q 037545          214 HPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWRIYVYTR  292 (383)
Q Consensus       214 ~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~v~~~~~  292 (383)
                      ||++|+|+++|++++.+.   ...++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++++
T Consensus       319 ~P~~~~kl~~Ei~~~~~~---~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~  395 (504)
T PLN00110        319 NPSILKRAHEEMDQVIGR---NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIW  395 (504)
T ss_pred             CHHHHHHHHHHHHHHhCC---CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHH
Confidence            999999999999999864   3568999999999999999999999999998 899999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCC---C--CCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccc-
Q 037545          293 EINYDPFLYPEPLTFSPWRWLDKGLE---S--HNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKIL-  365 (383)
Q Consensus       293 ~~~~d~~~~~~p~~F~P~R~~~~~~~---~--~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~-  365 (383)
                      .+||||++|+||++|+||||+++...   .  +++ ++|||+|+|.|+|++||++|++++|+.|+++|+|++.+++... 
T Consensus       396 ~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  475 (504)
T PLN00110        396 AIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNM  475 (504)
T ss_pred             HhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCc
Confidence            99999999999999999999965331   1  234 9999999999999999999999999999999999997654321 


Q ss_pred             --cc-ccccCCCCceEEEeeC
Q 037545          366 --QF-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       366 --~~-~~~~p~~~~~v~~~~r  383 (383)
                        .+ .+..|+.++.+++++|
T Consensus       476 ~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        476 DEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             ccccccccccCCCceEeeccC
Confidence              12 4557888999999887


No 23 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.6e-64  Score=473.74  Aligned_cols=378  Identities=18%  Similarity=0.251  Sum_probs=288.1

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhh-hhc--CCcccccCchhHHHHHHHHH-hhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLD-ILG--KCNIGAVHGSAHKYIRGSMM-SLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~-~~g--~~~i~~~~g~~~~~~R~~~~-~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++++.+++..|.++....... +.|  .+++++.+|+.|+++||++. +.|++..+. .+.+.++++++++++.
T Consensus        80 ~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~-~~~~~i~~~v~~lv~~  158 (503)
T PLN02394         80 SSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQ-QYRYGWEEEADLVVED  158 (503)
T ss_pred             CCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHH-HhhHHHHHHHHHHHHH
Confidence            699999999988777777654322323 323  24577889999999999985 999999998 9999999999999988


Q ss_pred             cC------CCcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHH----HHH---hhcc-ccccccCCCc-----chhh
Q 037545           77 WD------GKDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEF----DKL---MVGT-LSLPVNIPGT-----NYHR  137 (383)
Q Consensus        77 l~------~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~----~~~---~~~~-~~~~~~~p~~-----~~~~  137 (383)
                      |.      ++.+|+...++.+++|++++++||.+++...+.....+    ...   ...+ ..+...+|..     .+.+
T Consensus       159 l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (503)
T PLN02394        159 VRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLK  238 (503)
T ss_pred             HHHhhhccCCcEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHH
Confidence            74      24589999999999999999999987643211111111    111   1100 0011111110     1111


Q ss_pred             -HHhhHHHHHH-HHHHHHHHHHhC-------CCCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 037545          138 -GFQGRKRVVR-ILRQIMEERRAS-------SIVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAI  208 (383)
Q Consensus       138 -~~~~~~~~~~-~~~~~i~~~~~~-------~~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l  208 (383)
                       .......... +....++++++.       .....|+++.+++..++ +.++++++..++..+++||+|||+++++|++
T Consensus       239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l  317 (503)
T PLN02394        239 ICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKK-GEINEDNVLYIVENINVAAIETTLWSIEWGI  317 (503)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhcccc-CCCCHHHHHHHHHHHHHhchhhHHHHHHHHH
Confidence             1111122222 223345544331       11346899999986533 3589999999999999999999999999999


Q ss_pred             HHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCEE
Q 037545          209 KYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWRI  287 (383)
Q Consensus       209 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~v  287 (383)
                      |+|++||++|+||++||+++.+.   +..++.+++++||||+|||+|+||++|++|. ++|.+.+|++++||.||+||.|
T Consensus       318 ~~L~~~P~vq~kl~~Ei~~v~~~---~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V  394 (503)
T PLN02394        318 AELVNHPEIQKKLRDELDTVLGP---GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKI  394 (503)
T ss_pred             HHHHcCHHHHHHHHHHHHHHhCC---CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEE
Confidence            99999999999999999999864   3467899999999999999999999999999 5799999999999999999999


Q ss_pred             EeeccccccCCCCCCCCCCCCCCCCCCCCC----CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCC
Q 037545          288 YVYTREINYDPFLYPEPLTFSPWRWLDKGL----ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGD  362 (383)
Q Consensus       288 ~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~----~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~  362 (383)
                      .++.|.+||||++|+||++|+||||+++++    ...++ |+|||+|+|+|+|++||++|++++++.|+++|+|++.++.
T Consensus       395 ~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~  474 (503)
T PLN02394        395 LVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ  474 (503)
T ss_pred             EEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC
Confidence            999999999999999999999999997543    11344 9999999999999999999999999999999999987654


Q ss_pred             ccc--c--c--ccccCCCCceEEEeeC
Q 037545          363 KIL--Q--F--PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       363 ~~~--~--~--~~~~p~~~~~v~~~~r  383 (383)
                      ...  .  +  .....+.++.|++.+|
T Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (503)
T PLN02394        475 SKIDVSEKGGQFSLHIAKHSTVVFKPR  501 (503)
T ss_pred             CcCccccccCceeeccCCCceEEeecC
Confidence            212  2  1  2332347999999887


No 24 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=9.9e-64  Score=468.33  Aligned_cols=380  Identities=15%  Similarity=0.218  Sum_probs=291.5

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhhhcC--Cccccc-CchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhcc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDILGK--CNIGAV-HGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHNW   77 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~~g~--~~i~~~-~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~l   77 (383)
                      +||++++++|.+++..|.+++.......++.  .++++. +|+.|+++|+++++.|........+.+.++.+++++++.+
T Consensus        92 sdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l  171 (534)
T PLN03018         92 NSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYI  171 (534)
T ss_pred             CCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            6999999999988888888765444343442  256665 5999999999999987655544266667767777777765


Q ss_pred             C-----CCcccHHHHHHHHHHHHHHHHHhcCCchh------hHhH----HHHHHHHHhhcccc---------ccccCCCc
Q 037545           78 D-----GKDIDIQERTNEMALFISFKQIVEIESSQ------LYET----FKPEFDKLMVGTLS---------LPVNIPGT  133 (383)
Q Consensus        78 ~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~------~~~~----~~~~~~~~~~~~~~---------~~~~~p~~  133 (383)
                      .     ++++|+.+.++.++++++++++||.+.+.      ....    +...+......+..         ++.++..+
T Consensus       172 ~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  251 (534)
T PLN03018        172 HSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGW  251 (534)
T ss_pred             HHhcccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhh
Confidence            3     45799999999999999999999986421      0011    11111111111111         11111100


Q ss_pred             ---c-hhhHHhhHHHHHHHHHHHHHHHHhC----CC--CcchHHHHHHhhhcC-CC-CCChHHHHHHHHHHHHhhhhhHH
Q 037545          134 ---N-YHRGFQGRKRVVRILRQIMEERRAS----SI--VHNDMLDHLLRKEES-NY-NLSDEETIDQVITILYSGYETVS  201 (383)
Q Consensus       134 ---~-~~~~~~~~~~~~~~~~~~i~~~~~~----~~--~~~d~l~~ll~~~~~-~~-~l~~~~~~~~~~~~~~ag~~tt~  201 (383)
                         . ..+.......+.+++.+.++++++.    ..  ...|+++.++...++ +. .++++++++++..+++||+|||+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta  331 (534)
T PLN03018        252 NIDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPA  331 (534)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHH
Confidence               1 1222334466778888888776531    11  246899999976532 22 48999999999999999999999


Q ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcccc-cccccccccccCEE
Q 037545          202 TTLMMAIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGV-LRKTTKDIELNGFV  280 (383)
Q Consensus       202 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~~~~l~g~~  280 (383)
                      ++++|++++|++||++|+|+++||+++++.   ...++.+++.+||||+|||+|+||++|++|.+ +|.+.+|++++||.
T Consensus       332 ~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~---~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~  408 (534)
T PLN03018        332 NNMEWTLGEMLKNPEILRKALKELDEVVGK---DRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYF  408 (534)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHhCC---CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEE
Confidence            999999999999999999999999999863   35689999999999999999999999999995 79999999999999


Q ss_pred             eCCCCEEEeeccccccCCCCCCCCCCCCCCCCCCCCCC-------CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHc
Q 037545          281 VPKGWRIYVYTREINYDPFLYPEPLTFSPWRWLDKGLE-------SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVT  352 (383)
Q Consensus       281 ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~-------~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~  352 (383)
                      |||||.|.++.+++||||++|+||++|+||||++.+..       ..+. |+|||+|+|+|+|++||.+|++++++.|++
T Consensus       409 IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~  488 (534)
T PLN03018        409 IPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQ  488 (534)
T ss_pred             ECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999965431       1334 999999999999999999999999999999


Q ss_pred             cceEEEecCCccccc----ccccCCCCceEEEeeC
Q 037545          353 RYRWEEVGGDKILQF----PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       353 ~~~~~~~~~~~~~~~----~~~~p~~~~~v~~~~r  383 (383)
                      +|+|++.++......    .....+++++|++++|
T Consensus       489 ~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R  523 (534)
T PLN03018        489 GFNWKLHQDFGPLSLEEDDASLLMAKPLLLSVEPR  523 (534)
T ss_pred             hceEEeCCCCCCCCccccccceecCCCeEEEEEec
Confidence            999998765322211    3233447999999987


No 25 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.8e-63  Score=459.88  Aligned_cols=375  Identities=18%  Similarity=0.274  Sum_probs=291.1

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhh-hhcCC-ccccc-CchhHHHHHHH-HHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLD-ILGKC-NIGAV-HGSAHKYIRGS-MMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~-~~g~~-~i~~~-~g~~~~~~R~~-~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++++.+++..|..+....... +.|.. .+++. +|+.|+++||+ ..+.++...++ .+.+.+++.++.+++.
T Consensus        49 ~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~  127 (466)
T PLN02655         49 NSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQK-RFRDTRDMLIENMLSG  127 (466)
T ss_pred             CCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHH-HhHHHHHHHHHHHHHH
Confidence            699999999998888888765433333 34423 34444 48999999976 55677777777 8888887777776665


Q ss_pred             cC-------CCcccHHHHHHHHHHHHHHHHHhcCCchhhH-----------hHHHHHHHHHhhccc------ccc--ccC
Q 037545           77 WD-------GKDIDIQERTNEMALFISFKQIVEIESSQLY-----------ETFKPEFDKLMVGTL------SLP--VNI  130 (383)
Q Consensus        77 l~-------~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--~~~  130 (383)
                      +.       ++.+|+.+.+..+++|+++.++||.+.+...           ..+...+..+.....      .+|  .++
T Consensus       128 l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~  207 (466)
T PLN02655        128 LHALVKDDPHSPVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWI  207 (466)
T ss_pred             HHhhccccCCCceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhc
Confidence            42       5679999999999999999999997643210           112222222221110      111  223


Q ss_pred             CCcchhhH-HhhHHHHHHHHHHHHHHHHhC---CCCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHH
Q 037545          131 PGTNYHRG-FQGRKRVVRILRQIMEERRAS---SIVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMM  206 (383)
Q Consensus       131 p~~~~~~~-~~~~~~~~~~~~~~i~~~~~~---~~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~  206 (383)
                      |...+.+. .+....+..++.+.++++++.   .....|+++.+++..   ..++++++.+++.++++||+|||+++++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~---~~ls~~~i~~~~~~~~~ag~dtta~~l~~  284 (466)
T PLN02655        208 PNKSFETRVQTTEFRRTAVMKALIKQQKKRIARGEERDCYLDFLLSEA---THLTDEQLMMLVWEPIIEAADTTLVTTEW  284 (466)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32222222 222344557777777766543   223468999999754   34899999999999999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCC
Q 037545          207 AIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGW  285 (383)
Q Consensus       207 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~  285 (383)
                      ++++|++||++|+++++||+++.+.    ..++.+++.+||||+|||+|+||++||++. .+|.+.+|++++||.|||||
T Consensus       285 ~~~~l~~~p~~~~~l~~Ei~~~~~~----~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt  360 (466)
T PLN02655        285 AMYELAKNPDKQERLYREIREVCGD----ERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGT  360 (466)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHhCC----CCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCC
Confidence            9999999999999999999999863    238999999999999999999999999998 57999999999999999999


Q ss_pred             EEEeeccccccCCCCCCCCCCCCCCCCCCCCCC-CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCc
Q 037545          286 RIYVYTREINYDPFLYPEPLTFSPWRWLDKGLE-SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDK  363 (383)
Q Consensus       286 ~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~-~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~  363 (383)
                      .|+++.+++||||++|+||++|+||||++++.. .... ++|||+|+|.|||++||..+++++++.|+++|+|++.++..
T Consensus       361 ~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  440 (466)
T PLN02655        361 QIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE  440 (466)
T ss_pred             EEEecHHHhcCCcccCCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc
Confidence            999999999999999999999999999976432 2234 99999999999999999999999999999999999976543


Q ss_pred             cccc---ccccCCCCceEEEeeC
Q 037545          364 ILQF---PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       364 ~~~~---~~~~p~~~~~v~~~~r  383 (383)
                      ....   .+.+|++++.|++.+|
T Consensus       441 ~~~~~~~~~~~~~~~~~~~~~~r  463 (466)
T PLN02655        441 EKEDTVQLTTQKLHPLHAHLKPR  463 (466)
T ss_pred             cccchhheeEeecCCcEEEEeec
Confidence            2222   3456889999999876


No 26 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.3e-64  Score=469.66  Aligned_cols=376  Identities=27%  Similarity=0.436  Sum_probs=304.9

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhh----hhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSML----DILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~----~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++|+.+++..++.++.....    ...++.++++.+|+.|+.+|+++.+.|+..... .+.+.+++.++.+++.
T Consensus        50 ~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~  128 (463)
T PF00067_consen   50 SDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQ  128 (463)
T ss_dssp             ESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             ccchhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence            58999999999888788776432222    123448999999999999999999999988444 7999999999999998


Q ss_pred             cC---C--CcccHHHHHHHHHHHHHHHHHhcCCchhh----HhHHHHHHHHHhhc--------ccccc--ccCCCcchhh
Q 037545           77 WD---G--KDIDIQERTNEMALFISFKQIVEIESSQL----YETFKPEFDKLMVG--------TLSLP--VNIPGTNYHR  137 (383)
Q Consensus        77 l~---~--~~vdl~~~~~~~~~~~~~~~~fG~~~~~~----~~~~~~~~~~~~~~--------~~~~~--~~~p~~~~~~  137 (383)
                      |.   +  +.+|+.+.++.+++|+++.++||.+.+..    ...+...+..+...        ...+|  .+++....++
T Consensus       129 l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  208 (463)
T PF00067_consen  129 LRKKAGSSGPVDLFDWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRR  208 (463)
T ss_dssp             HHHTTTSESEEEHHHHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHH
T ss_pred             ccccccccceeeeecccccccccccccccccceeeecccccccccccccccccccccccccccccccccccccccccccc
Confidence            85   2  35999999999999999999999875411    22333333333211        11122  2334344455


Q ss_pred             HHhhHHHHHHHHHHHHHHHHhCCC----CcchHHHHHHhhh--cCC-CCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 037545          138 GFQGRKRVVRILRQIMEERRASSI----VHNDMLDHLLRKE--ESN-YNLSDEETIDQVITILYSGYETVSTTLMMAIKY  210 (383)
Q Consensus       138 ~~~~~~~~~~~~~~~i~~~~~~~~----~~~d~l~~ll~~~--~~~-~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~  210 (383)
                      ..++.+.+.+++.+.++++++...    ...|+++.++...  .++ ..++++++..++..+++||+|||+.+++|++++
T Consensus       209 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~  288 (463)
T PF00067_consen  209 FKRARDRLRKYIKEIIEERREELDDGDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYE  288 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSHHSSSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            566778999999999988875432    4678999999985  233 379999999999999999999999999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCcc-cccccccccccccCEEeCCCCEEEe
Q 037545          211 LHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVN-GVLRKTTKDIELNGFVVPKGWRIYV  289 (383)
Q Consensus       211 L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~~~~l~g~~ip~G~~v~~  289 (383)
                      |++||++|++|++||+++.+.   ...++.+++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|++
T Consensus       289 L~~~P~~~~kl~~Ei~~~~~~---~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~  365 (463)
T PF00067_consen  289 LAKNPEVQEKLREEIDSVLGD---GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIV  365 (463)
T ss_dssp             HHHSHHHHHHHHHHHHHHTTT---SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEE
T ss_pred             ccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999853   347899999999999999999999999999 5899999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCC--CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCcccc
Q 037545          290 YTREINYDPFLYPEPLTFSPWRWLDKGL--ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQ  366 (383)
Q Consensus       290 ~~~~~~~d~~~~~~p~~F~P~R~~~~~~--~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~  366 (383)
                      +++.+||||++|+||++|+|+||++.+.  ...+. |+|||.|+|+|||++||++|++++|+.|+++|+|+++++.....
T Consensus       366 ~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~  445 (463)
T PF00067_consen  366 SIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP  445 (463)
T ss_dssp             EHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC
Confidence            9999999999999999999999998876  23334 99999999999999999999999999999999999976543332


Q ss_pred             -c---ccccCCCCceEEE
Q 037545          367 -F---PRVEAPDGLRIRV  380 (383)
Q Consensus       367 -~---~~~~p~~~~~v~~  380 (383)
                       .   .+..|+.++.|+|
T Consensus       446 ~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  446 QEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             EECSCSSSEEESSSEEEE
T ss_pred             ccccCceEeeCCCcEEeC
Confidence             2   3566768888875


No 27 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4e-63  Score=466.63  Aligned_cols=379  Identities=19%  Similarity=0.252  Sum_probs=299.8

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhh--hhhcC-CcccccCchhHHHHHHH-HHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSML--DILGK-CNIGAVHGSAHKYIRGS-MMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~--~~~g~-~~i~~~~g~~~~~~R~~-~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++++.+++..|.++......  ..+|. .+++..+|+.|+++|++ +.+.|+.++++ .+.+.+.++++.+++.
T Consensus        81 ~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~-~~~~~~~~~~~~lv~~  159 (514)
T PLN03112         81 DDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLE-SFAKHRAEEARHLIQD  159 (514)
T ss_pred             CCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHH-HhhHHHHHHHHHHHHH
Confidence            69999999998888888766543221  13342 34567899999999999 55789999998 9999999999998886


Q ss_pred             cC-----CCcccHHHHHHHHHHHHHHHHHhcCCch-------hhHhHHHHHHHHHhhc--ccc----ccc--cC-CCcch
Q 037545           77 WD-----GKDIDIQERTNEMALFISFKQIVEIESS-------QLYETFKPEFDKLMVG--TLS----LPV--NI-PGTNY  135 (383)
Q Consensus        77 l~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~-------~~~~~~~~~~~~~~~~--~~~----~~~--~~-p~~~~  135 (383)
                      +.     ++.+|+.+.++.+++++++.++||.+..       .....+.+.+..+...  ...    +|.  ++ +....
T Consensus       160 l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  239 (514)
T PLN03112        160 VWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCE  239 (514)
T ss_pred             HHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHH
Confidence            42     5679999999999999999999997642       1122344433333221  111    111  11 11112


Q ss_pred             hhHHhhHHHHHHHHHHHHHHHHhCC------CCcchHHHHHHhhh-cCC-CCCChHHHHHHHHHHHHhhhhhHHHHHHHH
Q 037545          136 HRGFQGRKRVVRILRQIMEERRASS------IVHNDMLDHLLRKE-ESN-YNLSDEETIDQVITILYSGYETVSTTLMMA  207 (383)
Q Consensus       136 ~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~d~l~~ll~~~-~~~-~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~  207 (383)
                      ++..++.+.+.+++.+.++++++..      ....|+++.+++.. +++ ..++++++.+++..+++||+|||+++++|+
T Consensus       240 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~  319 (514)
T PLN03112        240 KKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWA  319 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHH
Confidence            4445667778888888887765421      23468999999864 222 248999999999999999999999999999


Q ss_pred             HHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCE
Q 037545          208 IKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWR  286 (383)
Q Consensus       208 l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~  286 (383)
                      +|+|++||++|+||++||+++.+.   ++.++.+++++||||+|||+|+||++|+++. ++|.+.+|+.++||.|||||.
T Consensus       320 l~~L~~~P~vq~kl~~Ei~~~~~~---~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~  396 (514)
T PLN03112        320 MAEVIKNPRVLRKIQEELDSVVGR---NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTR  396 (514)
T ss_pred             HHHHHhChHHHHHHHHHHHHhcCC---CCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCE
Confidence            999999999999999999999864   3568999999999999999999999999998 789999999999999999999


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCCCCC---C---CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEe
Q 037545          287 IYVYTREINYDPFLYPEPLTFSPWRWLDKGL---E---SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEV  359 (383)
Q Consensus       287 v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~---~---~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~  359 (383)
                      |.++.+++||||++|+||++|+||||+++..   .   ...+ |+|||+|+|+|+|++||++|++++|+.|+++|+|++.
T Consensus       397 v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~  476 (514)
T PLN03112        397 VFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPP  476 (514)
T ss_pred             EEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecC
Confidence            9999999999999999999999999865321   1   1233 9999999999999999999999999999999999987


Q ss_pred             cCC--ccccc-----ccccCCCCceEEEeeC
Q 037545          360 GGD--KILQF-----PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       360 ~~~--~~~~~-----~~~~p~~~~~v~~~~r  383 (383)
                      ++.  ..+..     ....+.++++|++.+|
T Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        477 DGLRPEDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             CCCCcccCCCccccCcccccCCCeEEEeecC
Confidence            542  12221     3334567999999987


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.9e-63  Score=463.37  Aligned_cols=374  Identities=17%  Similarity=0.295  Sum_probs=295.4

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhh-hhcCCcccccCchhHHHHHHHHHhhcChHHHhhhch-HHHHHHHHHHHhccC
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLD-ILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLL-PKIDKFMRSYLHNWD   78 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~-~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~-~~i~~~~~~~l~~l~   78 (383)
                      +||+++++|+.+.+..|..+....... .+| .++++++|+.|+++||++.+.|+...+. .+. +.+.++++.+++.+.
T Consensus        66 ~~pe~~~~il~~~~~~f~~~~~~~~~~~~~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~-~~~~~~~~~~~~~l~~~l~  143 (489)
T PLN02936         66 SDPAIAKHVLRNYGSKYAKGLVAEVSEFLFG-SGFAIAEGELWTARRRAVVPSLHRRYLS-VMVDRVFCKCAERLVEKLE  143 (489)
T ss_pred             cCHHHHHHHHHhccccccCcchhhhhHHHhc-CccccCCchHHHHHHHhhcCccCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            689999999987767777654433322 455 7888899999999999999999988887 664 478888888888863


Q ss_pred             -----CCcccHHHHHHHHHHHHHHHHHhcCCchhh--HhHHHHHHHHHhhc-----ccccccc-CC-----CcchhhHHh
Q 037545           79 -----GKDIDIQERTNEMALFISFKQIVEIESSQL--YETFKPEFDKLMVG-----TLSLPVN-IP-----GTNYHRGFQ  140 (383)
Q Consensus        79 -----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~-~p-----~~~~~~~~~  140 (383)
                           ++++|+.+.++.+++++++.++||.+.+..  ...+...+......     ...+|.+ .+     ....++..+
T Consensus       144 ~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~  223 (489)
T PLN02936        144 PVALSGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEK  223 (489)
T ss_pred             HHhcCCCceeHHHHHHHHHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHH
Confidence                 578999999999999999999999876431  11222222221111     1111111 00     112234556


Q ss_pred             hHHHHHHHHHHHHHHHHhC----C----------CCcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHH
Q 037545          141 GRKRVVRILRQIMEERRAS----S----------IVHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMM  206 (383)
Q Consensus       141 ~~~~~~~~~~~~i~~~~~~----~----------~~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~  206 (383)
                      +.+.+.+++.+.++++++.    .          ....|+++.++...   ..++++++.+++..+++||+|||+++++|
T Consensus       224 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~i~~~~~~~~~aG~dTta~~l~~  300 (489)
T PLN02936        224 AVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR---EEVSSVQLRDDLLSMLVAGHETTGSVLTW  300 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhcc---ccCCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            6777888888887765421    0          12467999998753   24899999999999999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCC
Q 037545          207 AIKYLHDHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGW  285 (383)
Q Consensus       207 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~  285 (383)
                      ++|+|++||++|+++++|++++++.    ..++++++.+||||+|||+|+||++||++. ..|.+.+|+.++||.||+|+
T Consensus       301 ~l~~L~~~p~~~~kl~~Ei~~~~~~----~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt  376 (489)
T PLN02936        301 TLYLLSKNPEALRKAQEELDRVLQG----RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQ  376 (489)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHhcC----CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCC
Confidence            9999999999999999999999863    347899999999999999999999999988 55555677778999999999


Q ss_pred             EEEeeccccccCCCCCCCCCCCCCCCCCCCCC----CCCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEec
Q 037545          286 RIYVYTREINYDPFLYPEPLTFSPWRWLDKGL----ESHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVG  360 (383)
Q Consensus       286 ~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~----~~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~  360 (383)
                      +|.++.+.+||||++|+||++|+||||+.++.    ...+. ++|||.|+|.|+|++||++|++++|+.|+++|++++++
T Consensus       377 ~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~  456 (489)
T PLN02936        377 DIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVP  456 (489)
T ss_pred             EEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecC
Confidence            99999999999999999999999999996432    11233 99999999999999999999999999999999999986


Q ss_pred             CCcccc-c-ccccCCCCceEEEeeC
Q 037545          361 GDKILQ-F-PRVEAPDGLRIRVSKY  383 (383)
Q Consensus       361 ~~~~~~-~-~~~~p~~~~~v~~~~r  383 (383)
                      +++... . .+..|++++.|++++|
T Consensus       457 ~~~~~~~~~~~~~~~~~~~v~~~~R  481 (489)
T PLN02936        457 DQDIVMTTGATIHTTNGLYMTVSRR  481 (489)
T ss_pred             CCccceecceEEeeCCCeEEEEEee
Confidence            543221 1 4456779999999887


No 29 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.2e-63  Score=465.32  Aligned_cols=359  Identities=18%  Similarity=0.288  Sum_probs=283.4

Q ss_pred             CCHHHHHHHHhhCCCccccCchhhhhhh--hcCCcc-cccCchhHHHHHHH-HHhhcChHHHhhhchHHHHHHHHHHHhc
Q 037545            1 MDPELNRYILMNEGKGLVPGYPQSMLDI--LGKCNI-GAVHGSAHKYIRGS-MMSLISPAMIKKQLLPKIDKFMRSYLHN   76 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~~~~~~~--~g~~~i-~~~~g~~~~~~R~~-~~~~~~~~~l~~~~~~~i~~~~~~~l~~   76 (383)
                      +||+++++|+.+++..|.+++.......  .|..++ +..+|+.|+++|++ +++.|++.++. .+.+.+.++++++++.
T Consensus        79 ~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~-~~~~~i~~~~~~l~~~  157 (502)
T PLN02966         79 SSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVA-TFKHVREEEARRMMDK  157 (502)
T ss_pred             CCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHH
Confidence            5899999999987777776544322222  232333 45679999999998 88999999999 9999999999999998


Q ss_pred             cC-----CCcccHHHHHHHHHHHHHHHHHhcCCchhhH---hHHHHHHHHHhhcc--ccccccCCC-------cchhh-H
Q 037545           77 WD-----GKDIDIQERTNEMALFISFKQIVEIESSQLY---ETFKPEFDKLMVGT--LSLPVNIPG-------TNYHR-G  138 (383)
Q Consensus        77 l~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~p~-------~~~~~-~  138 (383)
                      |.     ++.+|+.+.+..+++|+++.++||.+.+...   ..+.+.+.......  ..+..++|.       ..+.+ .
T Consensus       158 l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  237 (502)
T PLN02966        158 INKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYM  237 (502)
T ss_pred             HHHhccCCCceeHHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHH
Confidence            83     5579999999999999999999998764322   22333332221110  001111111       11111 2


Q ss_pred             HhhHHHHHHHHHHHHHHHHhC---CCCcchHHHHHHhhhcC---CCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 037545          139 FQGRKRVVRILRQIMEERRAS---SIVHNDMLDHLLRKEES---NYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLH  212 (383)
Q Consensus       139 ~~~~~~~~~~~~~~i~~~~~~---~~~~~d~l~~ll~~~~~---~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~  212 (383)
                      ..+.+.+.+++.+.++++.+.   .....|+++.+++..++   +..++++++.+++..+++||+|||+++++|++|+|+
T Consensus       238 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~  317 (502)
T PLN02966        238 KECFERQDTYIQEVVNETLDPKRVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLM  317 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence            334556666677766655322   11346899999976522   235899999999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccc-ccccccccccccCEEeCCCCEEEeec
Q 037545          213 DHPRALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNG-VLRKTTKDIELNGFVVPKGWRIYVYT  291 (383)
Q Consensus       213 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~~~~l~g~~ip~G~~v~~~~  291 (383)
                      +||++|+|+++|++++++..+ ...++++++++||||+|||+|+|||+|++|. ++|.+.+|++++||.|||||.|.+++
T Consensus       318 ~~P~~q~kl~~Ei~~v~~~~~-~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~  396 (502)
T PLN02966        318 KYPQVLKKAQAEVREYMKEKG-STFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNA  396 (502)
T ss_pred             hCHHHHHHHHHHHHHHhcccC-CCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEec
Confidence            999999999999999986421 2467999999999999999999999999998 68999999999999999999999999


Q ss_pred             cccccCCCCC-CCCCCCCCCCCCCCCCC--CCCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecC
Q 037545          292 REINYDPFLY-PEPLTFSPWRWLDKGLE--SHNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGG  361 (383)
Q Consensus       292 ~~~~~d~~~~-~~p~~F~P~R~~~~~~~--~~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~  361 (383)
                      |.+||||++| +||++|+||||++++..  ..+. |+|||+|+|+|+|++||++|++++++.|+++|+|++.++
T Consensus       397 ~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~  470 (502)
T PLN02966        397 WAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG  470 (502)
T ss_pred             ccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC
Confidence            9999999999 99999999999975431  2333 999999999999999999999999999999999998765


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-60  Score=407.20  Aligned_cols=379  Identities=24%  Similarity=0.388  Sum_probs=316.6

Q ss_pred             CHHHHHHHHhhCCCccc--cCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHhc-cC
Q 037545            2 DPELNRYILMNEGKGLV--PGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLHN-WD   78 (383)
Q Consensus         2 dp~~v~~il~~~~~~~~--~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~-l~   78 (383)
                      ||+....++......++  ..+.......+|++.+....+..+..+.+.+...+...+++ ++.+.|.+++.+.++. |.
T Consensus        82 ~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk-~~~e~m~~el~~~f~~~~~  160 (486)
T KOG0684|consen   82 GPEGYDFVFKAKLADLDFEEAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALK-SLVELMLEELHAYFETSLG  160 (486)
T ss_pred             CchhhHHHHcCcccccCHHHHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHH-HHHHHHHHHHHHHHhcccc
Confidence            67777788864423332  22223445578855666778889999999999999999999 9999999999999988 65


Q ss_pred             --CCcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccc----cccccCCCcchhhHHhhHHHHHHHHHHH
Q 037545           79 --GKDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTL----SLPVNIPGTNYHRGFQGRKRVVRILRQI  152 (383)
Q Consensus        79 --~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~  152 (383)
                        +....+..+....++.+.-.++||.......++....+.++.+++.    -+|.++|....++..++++++...+...
T Consensus       161 ~s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~  240 (486)
T KOG0684|consen  161 ESGETDGLYTFCRLIIFTASRLLLGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKI  240 (486)
T ss_pred             cccchhHhhhhhHHHhhhhHHHhhhhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHH
Confidence              4455567777777777777777776543333444455555544433    3455777778888889999999999999


Q ss_pred             HHHHHhCCC-CcchHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Q 037545          153 MEERRASSI-VHNDMLDHLLRKEESNYNLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQR  231 (383)
Q Consensus       153 i~~~~~~~~-~~~d~l~~ll~~~~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  231 (383)
                      +.+++++.+ ...|+++.+++..+++...+++|+....+.+++||+.|++.|..|++++|++|||+++++++|+.++++.
T Consensus       241 i~~rr~s~s~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~  320 (486)
T KOG0684|consen  241 ILDRRASISKWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE  320 (486)
T ss_pred             HHHHHhccccccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence            999998876 5569999999955678889999999999999999999999999999999999999999999999999975


Q ss_pred             CCCCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccC----EEeCCCCEEEeeccccccCCCCCCCCCCC
Q 037545          232 KKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNG----FVVPKGWRIYVYTREINYDPFLYPEPLTF  307 (383)
Q Consensus       232 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  307 (383)
                      .  ...++++.+++||.|++||+|||||+||.+++.|.+.+|.++.+    |.||+|.+|.++++.+||||++|+||+.|
T Consensus       321 ~--~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~F  398 (486)
T KOG0684|consen  321 K--KEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDF  398 (486)
T ss_pred             c--CCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhC
Confidence            3  34599999999999999999999999999999999999999865    99999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC------CCc-cccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecC-Cccccc--ccccCCCCce
Q 037545          308 SPWRWLDKGLES------HNY-CFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGG-DKILQF--PRVEAPDGLR  377 (383)
Q Consensus       308 ~P~R~~~~~~~~------~~~-~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~-~~~~~~--~~~~p~~~~~  377 (383)
                      +|+||++++++.      -++ |+|||+|.|.|||+.||.+|+|+++..+|+.|++++.++ -...++  .++.|..++.
T Consensus       399 k~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~  478 (486)
T KOG0684|consen  399 KPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVR  478 (486)
T ss_pred             ChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCce
Confidence            999999776622      123 699999999999999999999999999999999999985 333344  7889999999


Q ss_pred             EEEeeC
Q 037545          378 IRVSKY  383 (383)
Q Consensus       378 v~~~~r  383 (383)
                      ++.+.|
T Consensus       479 irYK~R  484 (486)
T KOG0684|consen  479 IRYKRR  484 (486)
T ss_pred             EEEeec
Confidence            998876


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.5e-58  Score=417.69  Aligned_cols=348  Identities=26%  Similarity=0.371  Sum_probs=287.2

Q ss_pred             CCHHHHHHHHhhCCCccccCch----h-hhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHHh
Q 037545            1 MDPELNRYILMNEGKGLVPGYP----Q-SMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYLH   75 (383)
Q Consensus         1 sdp~~v~~il~~~~~~~~~~~~----~-~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~   75 (383)
                      ++++++++++.+.. .+++...    . .....+|..++++++|+.|.++||++++.|+++.++ .+.+.|.+.++++++
T Consensus        54 s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~~~~F~~~~~~-~~~~~i~~~~~~~~~  131 (411)
T COG2124          54 SRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLAPAFTPRALR-GYRPLIREIADRLLD  131 (411)
T ss_pred             cCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHHhccccCHHHHH-HHHHHHHHHHHHHHH
Confidence            57999999998653 2222211    1 134466755689999999999999999999999999 999999999999999


Q ss_pred             ccC-CCcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhccccccccCCCcchhhHHhhHHHHHHHHHHHHH
Q 037545           76 NWD-GKDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLSLPVNIPGTNYHRGFQGRKRVVRILRQIME  154 (383)
Q Consensus        76 ~l~-~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  154 (383)
                      .+. ++.+++.+++..+++++++ .+||...++. ..+............  +...+...+.+..++...+.+++.++|+
T Consensus       132 ~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~li~  207 (411)
T COG2124         132 DLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDR-PQLLRWSDALLLRLD--PDLGPEEPWRRARAARRELDAYLRALIA  207 (411)
T ss_pred             hcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHH-HHHHHHHHHHHhccC--cccCCcccHHHHHHHHHHHHHHHHHHHH
Confidence            885 4577889999999999999 8889976433 333333333322211  3333334467778899999999999999


Q ss_pred             HHHhCCCCcchHHHHHHhhhcCCC-CCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcCC
Q 037545          155 ERRASSIVHNDMLDHLLRKEESNY-NLSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQRKK  233 (383)
Q Consensus       155 ~~~~~~~~~~d~l~~ll~~~~~~~-~l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  233 (383)
                      +++..  ...|+++.++...+++. .++++|+.+++.++++||+|||+++|+|++|.|++||++++++++|.+.      
T Consensus       208 ~rR~~--~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------  279 (411)
T COG2124         208 ERRAA--PRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR------  279 (411)
T ss_pred             HhccC--CcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------
Confidence            99944  67899999998874444 6999999999999999999999999999999999999999999999533      


Q ss_pred             CCCCCChhhhhcChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEeeccccccCCCCCCCCCCCCCCCCC
Q 037545          234 PEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVYTREINYDPFLYPEPLTFSPWRWL  313 (383)
Q Consensus       234 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~  313 (383)
                                   ||++++|+|+||++||++...|.+.+|++++|+.||+|+.|+++.+.+||||++|++|++|+|+||.
T Consensus       280 -------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~  346 (411)
T COG2124         280 -------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN  346 (411)
T ss_pred             -------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC
Confidence                         8889999999999999999999999999999999999999999999999999999999999999996


Q ss_pred             CCCCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHccceEEEecCCccccc-ccccCCCCceEEEee
Q 037545          314 DKGLESHNYCFVFGGGSRLCPGKELGIVQISTFLHYFVTRYRWEEVGGDKILQF-PRVEAPDGLRIRVSK  382 (383)
Q Consensus       314 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~~~p~~~~~v~~~~  382 (383)
                             ..|+|||+|+|.|+|++||++|++++|+.|+++|++....++..... ....|..+..+.++.
T Consensus       347 -------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~~~~~~~~~~~~~g~~~l~v~~  409 (411)
T COG2124         347 -------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEPPPLVRRPTLVPRGGERLPVRR  409 (411)
T ss_pred             -------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCCCCCccccccccCCCcceeeeec
Confidence                   22999999999999999999999999999999999888766222222 445555566665553


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=4.3e-55  Score=402.05  Aligned_cols=344  Identities=14%  Similarity=0.264  Sum_probs=255.9

Q ss_pred             CCHHHHHHHHhh----CCCccccCchhhhhhhhcCC---cccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHH
Q 037545            1 MDPELNRYILMN----EGKGLVPGYPQSMLDILGKC---NIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSY   73 (383)
Q Consensus         1 sdp~~v~~il~~----~~~~~~~~~~~~~~~~~g~~---~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~   73 (383)
                      +||++++.+|.+    +...+...++.... ++|++   +++..+|+.|+++|+++.+.|+ ..+. .+.+.|.+.++++
T Consensus        79 ~~~e~~~~v~~~~~~~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~-~~~~~m~~~~~~~  155 (480)
T PLN02648         79 LDQKSFPVLFDVSKVDKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHR-RFIPEFRAAFAEL  155 (480)
T ss_pred             EcCCceeeeecchhccccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhh-hhhhHHHHHHHHH
Confidence            478999999975    44445555554443 78866   7888999999999999999999 5777 8999999999999


Q ss_pred             HhccC-----CCcccHHHHHHHHHHHHHHHHHhcCCchhhHhHHHHHHHHHhhcccc---ccccCCCcchhhHHhhHHHH
Q 037545           74 LHNWD-----GKDIDIQERTNEMALFISFKQIVEIESSQLYETFKPEFDKLMVGTLS---LPVNIPGTNYHRGFQGRKRV  145 (383)
Q Consensus        74 l~~l~-----~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~  145 (383)
                      ++.|.     ++++|+.+.+..+++|++++++||.+.+.  ..+.+.+..+...+..   +|..            ...+
T Consensus       156 ~~~w~~~~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~------------~~~l  221 (480)
T PLN02648        156 FDTWEAELAKKGKAEFNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLA------------STGL  221 (480)
T ss_pred             HHHHHHHHhhCCCccccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHH------------HcCc
Confidence            99994     45799999999999999999999986543  1222222222111100   1100            0000


Q ss_pred             HHHHHHHHHHHHh-----CCCCcchH-------HHHHHhhhcCCCCCChHHHHHHHHH-HHHhhhhhHHHHHHHHHHHHh
Q 037545          146 VRILRQIMEERRA-----SSIVHNDM-------LDHLLRKEESNYNLSDEETIDQVIT-ILYSGYETVSTTLMMAIKYLH  212 (383)
Q Consensus       146 ~~~~~~~i~~~~~-----~~~~~~d~-------l~~ll~~~~~~~~l~~~~~~~~~~~-~~~ag~~tt~~~l~~~l~~L~  212 (383)
                      ...+++.+.++..     ......++       ++.+++..+. ..++++++.++++. +.++++++++++++|++|+|+
T Consensus       222 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~  300 (480)
T PLN02648        222 PHVLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEK-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVG  300 (480)
T ss_pred             hHHHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            0111111110000     00001111       2234433322 24999999988875 446677778889999999999


Q ss_pred             hCHH-HHHHHHHHHHHHhhcCCCCCCCChhhhhcChhHHHHHhhhhccCcCccccccccccccccc----CEEeCCCCEE
Q 037545          213 DHPR-ALKELRDEHMAIRQRKKPEEPIDWNEYKSMSFTRAVIFETSRLASIVNGVLRKTTKDIELN----GFVVPKGWRI  287 (383)
Q Consensus       213 ~~p~-~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~----g~~ip~G~~v  287 (383)
                      +||+ +|++|++|++.+.+.  .+..++++++++||||++||+|+|||+|+++.+.|.+.+|++++    ||.||||+.|
T Consensus       301 ~~p~~v~~klr~Ei~~~~~~--~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V  378 (480)
T PLN02648        301 RAGEELQARLAEEVRSAVKA--GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEML  378 (480)
T ss_pred             cCCHHHHHHHHHHHHHHhcc--CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEE
Confidence            9995 999999999999853  13568999999999999999999999999999889999999996    7999999999


Q ss_pred             EeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccc---------cCCCCCCcchHHHHHHHHHHHHHHHccce-EE
Q 037545          288 YVYTREINYDPFLYPEPLTFSPWRWLDKGLESHNYCFVF---------GGGSRLCPGKELGIVQISTFLHYFVTRYR-WE  357 (383)
Q Consensus       288 ~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~l~~l~~~~~-~~  357 (383)
                      +++.+.+||||++|+||++|+|+||++++......+++|         |+|+|.|+|++||++|++++++.|+++|+ |+
T Consensus       379 ~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~  458 (480)
T PLN02648        379 FGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFE  458 (480)
T ss_pred             EEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEe
Confidence            999999999999999999999999986533211114444         67789999999999999999999999998 99


Q ss_pred             EecCCcc
Q 037545          358 EVGGDKI  364 (383)
Q Consensus       358 ~~~~~~~  364 (383)
                      +.++...
T Consensus       459 l~~~~~~  465 (480)
T PLN02648        459 IEVDTSG  465 (480)
T ss_pred             ecCCccc
Confidence            8766443


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=80.34  E-value=5.9  Score=23.68  Aligned_cols=43  Identities=14%  Similarity=0.258  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 037545          183 EETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEH  225 (383)
Q Consensus       183 ~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  225 (383)
                      -++...+..++-.|.|..+-.++..+.+..-||+....+-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3567888889999999999999999999999999888877765


No 34 
>PRK06789 flagellar motor switch protein; Validated
Probab=62.91  E-value=8.8  Score=25.45  Aligned_cols=39  Identities=10%  Similarity=-0.030  Sum_probs=32.3

Q ss_pred             HHhhhhccCcCccc-cccccccccc--ccCEEeCCCCEEEee
Q 037545          252 VIFETSRLASIVNG-VLRKTTKDIE--LNGFVVPKGWRIYVY  290 (383)
Q Consensus       252 ~i~E~lRl~p~~~~-~~R~~~~~~~--l~g~~ip~G~~v~~~  290 (383)
                      -|+|.+.|.+..-. +.|.+.+++.  ++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            47899999987756 8888888754  589999999999885


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=60.44  E-value=9.8  Score=23.69  Aligned_cols=21  Identities=24%  Similarity=0.618  Sum_probs=17.2

Q ss_pred             HHHHHhhCHHHHHHHHHHHHH
Q 037545          207 AIKYLHDHPRALKELRDEHMA  227 (383)
Q Consensus       207 ~l~~L~~~p~~~~~lr~Ei~~  227 (383)
                      .+.+|.+||++.++|.+.-.+
T Consensus         5 iV~YLv~nPevl~kl~~g~as   25 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEAS   25 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCee
Confidence            578999999999999876433


No 36 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=53.25  E-value=6.1  Score=24.04  Aligned_cols=11  Identities=55%  Similarity=0.899  Sum_probs=9.2

Q ss_pred             ccccCCCCCCc
Q 037545          324 FVFGGGSRLCP  334 (383)
Q Consensus       324 ~~Fg~G~r~C~  334 (383)
                      -+||.|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999885


No 37 
>PHA03162 hypothetical protein; Provisional
Probab=49.48  E-value=12  Score=27.54  Aligned_cols=24  Identities=21%  Similarity=0.506  Sum_probs=20.7

Q ss_pred             cCCCCCCcchHHHHHHHHHHHHHH
Q 037545          327 GGGSRLCPGKELGIVQISTFLHYF  350 (383)
Q Consensus       327 g~G~r~C~G~~~a~~~~~~~l~~l  350 (383)
                      ++|++.|||+...+.++..=|++|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            579999999999999988777766


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=46.89  E-value=15  Score=29.88  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=31.3

Q ss_pred             cChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEe
Q 037545          245 SMSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYV  289 (383)
Q Consensus       245 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~  289 (383)
                      .-....|||.|+.-+.... .+-=...+|+.++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3455668888887665433 2333456789999999999998654


No 39 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=43.38  E-value=1.3e+02  Score=22.21  Aligned_cols=88  Identities=19%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHhCCCCc-----chHHHHHHhhh---------cCCCCCChHHHHHHHHHHHHhhhhhHHHHHHHH-
Q 037545          143 KRVVRILRQIMEERRASSIVH-----NDMLDHLLRKE---------ESNYNLSDEETIDQVITILYSGYETVSTTLMMA-  207 (383)
Q Consensus       143 ~~~~~~~~~~i~~~~~~~~~~-----~d~l~~ll~~~---------~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~~-  207 (383)
                      +.+.+-|..+++++++.+..+     .+....|+..+         +.+..++.++.-..++.-+.-...+++..|+.. 
T Consensus        10 ~~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~   89 (127)
T PF05261_consen   10 NKVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSS   89 (127)
T ss_dssp             HCHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            445666778888888776533     34566666653         245568888888888888787777777777653 


Q ss_pred             -HHHHhhCH---------HHHHHHHHHHHHHhh
Q 037545          208 -IKYLHDHP---------RALKELRDEHMAIRQ  230 (383)
Q Consensus       208 -l~~L~~~p---------~~~~~lr~Ei~~~~~  230 (383)
                       .-++..+|         ++++++++++...++
T Consensus        90 ls~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFp  122 (127)
T PF05261_consen   90 LSPEVKGNPKFEYENMVEKIREKVSEEMERFFP  122 (127)
T ss_dssp             CSHHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-
T ss_pred             ccHhhccCCcccHHHHHHHHHHHHHHHHHhcCC
Confidence             34454443         445555666655554


No 40 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=40.59  E-value=23  Score=26.54  Aligned_cols=23  Identities=30%  Similarity=0.553  Sum_probs=17.3

Q ss_pred             CCCcchHHHHHHHHHHHHHHHcc
Q 037545          331 RLCPGKELGIVQISTFLHYFVTR  353 (383)
Q Consensus       331 r~C~G~~~a~~~~~~~l~~l~~~  353 (383)
                      -+|.|+.||..++-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            58999999999999999999875


No 41 
>PF08780 NTase_sub_bind:  Nucleotidyltransferase substrate binding protein like;  InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=40.31  E-value=1.2e+02  Score=22.50  Aligned_cols=60  Identities=13%  Similarity=0.141  Sum_probs=37.3

Q ss_pred             HHHHHHHhhCCCccccCchhhhhh-hhcCCcccccCchhHHHH---HHHHHhhcChHHHhhhchHHHH
Q 037545            4 ELNRYILMNEGKGLVPGYPQSMLD-ILGKCNIGAVHGSAHKYI---RGSMMSLISPAMIKKQLLPKID   67 (383)
Q Consensus         4 ~~v~~il~~~~~~~~~~~~~~~~~-~~g~~~i~~~~g~~~~~~---R~~~~~~~~~~~l~~~~~~~i~   67 (383)
                      +++|+.|...+..... .+..... .+ ..|++ .|++.|...   |..+++..+..... .....|.
T Consensus        45 K~lK~~L~~~G~~~~~-spr~~~r~A~-~~glI-~d~e~Wl~m~~~RN~tsHtYde~~a~-~i~~~I~  108 (124)
T PF08780_consen   45 KTLKDYLEYEGISECN-SPRDVFREAF-KAGLI-DDGEIWLDMLEDRNLTSHTYDEETAE-EIYERIP  108 (124)
T ss_dssp             HHHHHHHHHCTSSCCT-SHHHHHHHHH-HTTSS-SHHHHHHHHHHHHHHGGGTTSHHHHH-HHHHTHH
T ss_pred             HHHHHHHHHhCCcccC-CHHHHHHHHH-HcCCC-CCHHHHHHHHHHhccccCCCCHHHHH-HHHHHHH
Confidence            4677888776664222 2233333 33 36777 788889755   46688888887766 5555555


No 42 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=35.64  E-value=24  Score=22.21  Aligned_cols=8  Identities=63%  Similarity=1.215  Sum_probs=5.5

Q ss_pred             CCCCCCCC
Q 037545          308 SPWRWLDK  315 (383)
Q Consensus       308 ~P~R~~~~  315 (383)
                      ||||||..
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            77777753


No 43 
>PRK05933 type III secretion system protein; Validated
Probab=35.35  E-value=39  Score=29.60  Aligned_cols=43  Identities=26%  Similarity=-0.009  Sum_probs=34.1

Q ss_pred             hHHHHHhhhhccCcCccc-ccccc-cc--cccccCEEeCCCCEEEee
Q 037545          248 FTRAVIFETSRLASIVNG-VLRKT-TK--DIELNGFVVPKGWRIYVY  290 (383)
Q Consensus       248 ~l~a~i~E~lRl~p~~~~-~~R~~-~~--~~~l~g~~ip~G~~v~~~  290 (383)
                      -...-|+|.|+|.+..-. +-|.+ .+  |+.++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            455678999999997766 76765 44  466799999999999885


No 44 
>PF02663 FmdE:  FmdE, Molybdenum formylmethanofuran dehydrogenase operon ;  InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].  This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=32.59  E-value=37  Score=25.45  Aligned_cols=22  Identities=32%  Similarity=0.455  Sum_probs=17.9

Q ss_pred             CCCcchHHHHHHHHHHHHHHHc
Q 037545          331 RLCPGKELGIVQISTFLHYFVT  352 (383)
Q Consensus       331 r~C~G~~~a~~~~~~~l~~l~~  352 (383)
                      |.|||.-++..+.+.++..|-.
T Consensus         5 H~Cpgl~~G~r~~~~a~~~l~~   26 (131)
T PF02663_consen    5 HLCPGLALGYRMAKYALEELGI   26 (131)
T ss_dssp             S--HHHHHHHHHHHHHHHHHTS
T ss_pred             CcCccHHHHHHHHHHHHHHcCC
Confidence            8999999999999999988844


No 45 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=31.99  E-value=39  Score=23.08  Aligned_cols=20  Identities=25%  Similarity=0.401  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHHccceEEEec
Q 037545          341 VQISTFLHYFVTRYRWEEVG  360 (383)
Q Consensus       341 ~~~~~~l~~l~~~~~~~~~~  360 (383)
                      .-|+-++.++|+-|+|.|.+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            34788999999999999985


No 46 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=30.74  E-value=1.8e+02  Score=19.92  Aligned_cols=51  Identities=12%  Similarity=0.242  Sum_probs=42.8

Q ss_pred             CChHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 037545          180 LSDEETIDQVITILYSGYETVSTTLMMAIKYLHDHPRALKELRDEHMAIRQ  230 (383)
Q Consensus       180 l~~~~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  230 (383)
                      ...+.........++--+..++....-.+.+-++||+..+++.+.+...+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            455666677778888889999999999999999999999999999877654


No 47 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=29.47  E-value=21  Score=28.00  Aligned_cols=32  Identities=19%  Similarity=0.463  Sum_probs=22.3

Q ss_pred             CCCCCCCCCCC---CCCCCccccccCCCCCCcchH
Q 037545          306 TFSPWRWLDKG---LESHNYCFVFGGGSRLCPGKE  337 (383)
Q Consensus       306 ~F~P~R~~~~~---~~~~~~~~~Fg~G~r~C~G~~  337 (383)
                      +|||++|=.--   .++....+-|..|+-.|-|..
T Consensus        36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            68888883210   023344899999999999975


No 48 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.06  E-value=39  Score=27.69  Aligned_cols=19  Identities=37%  Similarity=0.523  Sum_probs=17.1

Q ss_pred             ccccCCCCCCCCCCCCCCC
Q 037545          293 EINYDPFLYPEPLTFSPWR  311 (383)
Q Consensus       293 ~~~~d~~~~~~p~~F~P~R  311 (383)
                      ..|.|+.+|.|...|.|-|
T Consensus       193 ~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  193 PDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCcccccCccccCCCC
Confidence            3489999999999999988


No 49 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=25.89  E-value=67  Score=24.36  Aligned_cols=41  Identities=15%  Similarity=0.099  Sum_probs=32.9

Q ss_pred             HHHHhhhhccCcCccc-cccccccccc--ccCEEeCCCCEEEee
Q 037545          250 RAVIFETSRLASIVNG-VLRKTTKDIE--LNGFVVPKGWRIYVY  290 (383)
Q Consensus       250 ~a~i~E~lRl~p~~~~-~~R~~~~~~~--l~g~~ip~G~~v~~~  290 (383)
                      ..-|+|-++|.+..-. +.+.+-.++.  ++|+.|-+|..|.++
T Consensus        83 ~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          83 KMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            3457899999987656 8888887755  589999999999874


No 50 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=25.15  E-value=31  Score=21.20  Aligned_cols=14  Identities=36%  Similarity=0.781  Sum_probs=10.9

Q ss_pred             cccCCCCCCc--chHH
Q 037545          325 VFGGGSRLCP--GKEL  338 (383)
Q Consensus       325 ~Fg~G~r~C~--G~~~  338 (383)
                      .||.|+|.|.  |..-
T Consensus        11 ~yGkGsr~C~vCg~~~   26 (54)
T PTZ00218         11 TYGKGSRQCRVCSNRH   26 (54)
T ss_pred             cCCCCCCeeecCCCcc
Confidence            4999999997  6643


No 51 
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.82  E-value=42  Score=32.10  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=15.1

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCc
Q 037545          296 YDPFLYPEPLTFSPWRWLDKGLESHNYCFVFGGGSRLCP  334 (383)
Q Consensus       296 ~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~Fg~G~r~C~  334 (383)
                      +||..=|||++|-|-|       .+..|-|=-.|.|.-+
T Consensus       575 yn~~~tPDPERWLP~r-------eRS~yr~KrK~k~~~~  606 (652)
T KOG2376|consen  575 YNPKVTPDPERWLPRR-------ERSTYRPKRKGKRAAI  606 (652)
T ss_pred             CCCCCCCChhhcccch-------hccccCcccccchhhh
Confidence            4444445554444444       2333555555555333


No 52 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=24.73  E-value=99  Score=17.83  Aligned_cols=19  Identities=11%  Similarity=0.125  Sum_probs=14.6

Q ss_pred             HHHHHHHhhCHHHHHHHHH
Q 037545          205 MMAIKYLHDHPRALKELRD  223 (383)
Q Consensus       205 ~~~l~~L~~~p~~~~~lr~  223 (383)
                      .|-++.+.++|++|.-|.=
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4667788899999987753


No 53 
>PF11922 DUF3440:  Domain of unknown function (DUF3440);  InterPro: IPR021845  This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is typically between 53 to 190 amino acids in length. This domain is found associated with PF01507 from PFAM. This domain has a conserved KND sequence motif. 
Probab=24.62  E-value=3e+02  Score=21.97  Aligned_cols=70  Identities=16%  Similarity=0.158  Sum_probs=45.1

Q ss_pred             CHHHHHHHH-hhCCCccccCchhhhhhhhcCCcccccCchhHHHHHHHHHhhcChHHHhhhchHHHHHHHHHHH
Q 037545            2 DPELNRYIL-MNEGKGLVPGYPQSMLDILGKCNIGAVHGSAHKYIRGSMMSLISPAMIKKQLLPKIDKFMRSYL   74 (383)
Q Consensus         2 dp~~v~~il-~~~~~~~~~~~~~~~~~~~g~~~i~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l   74 (383)
                      +|+.-..++ ..++.+|...+.....  +|-..+-.+.|-.|+....++...+.+..-. .|...+...++-.-
T Consensus        28 EPetW~k~v~RV~Ganfg~iY~~t~~--~G~~~i~lP~~~TWk~Y~~FLL~TlP~~tr~-~Y~~Ki~~~i~~w~   98 (181)
T PF11922_consen   28 EPETWGKMVGRVNGANFGAIYGGTSA--MGYRKIKLPEGHTWKSYAEFLLDTLPEKTRE-HYRNKIAVSIRWWR   98 (181)
T ss_pred             CHHHHHHHHHHHccccccccccCcch--hhhhccCCCCCCCHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHH
Confidence            455555555 3345666655543322  5556677788899999999988888666555 77777665554433


No 54 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=23.73  E-value=1.4e+02  Score=19.37  Aligned_cols=25  Identities=16%  Similarity=0.170  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHH
Q 037545          201 STTLMMAIKYLHDHPRALKELRDEH  225 (383)
Q Consensus       201 ~~~l~~~l~~L~~~p~~~~~lr~Ei  225 (383)
                      +...+-.+--++++||.+.+++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4555667788999999999998763


No 55 
>PHA01327 hypothetical protein
Probab=22.13  E-value=53  Score=18.65  Aligned_cols=20  Identities=20%  Similarity=0.209  Sum_probs=15.8

Q ss_pred             CcccccCchhHHHHHHHHHh
Q 037545           32 CNIGAVHGSAHKYIRGSMMS   51 (383)
Q Consensus        32 ~~i~~~~g~~~~~~R~~~~~   51 (383)
                      ++++...|+.|...|..+..
T Consensus        12 ~~vinehge~wqer~drmkk   31 (49)
T PHA01327         12 NNVINEHGEEWQERKDRMKK   31 (49)
T ss_pred             chHHHhhHHHHHHHHHHHHH
Confidence            67778889999998866654


No 56 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=21.97  E-value=1.5e+02  Score=16.70  Aligned_cols=18  Identities=28%  Similarity=0.499  Sum_probs=11.5

Q ss_pred             HHHHHHh-hCHHHHHHHHH
Q 037545          206 MAIKYLH-DHPRALKELRD  223 (383)
Q Consensus       206 ~~l~~L~-~~p~~~~~lr~  223 (383)
                      ..+..+. +||++++.++.
T Consensus        17 ~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   17 SLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHhChhHHHHHHh
Confidence            3344444 69998887764


No 57 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=21.49  E-value=3.4e+02  Score=19.94  Aligned_cols=73  Identities=18%  Similarity=0.231  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHHHhCCCCc-----chHHHHHHhhh---------cCCCCCChHHHHHHHHHHHHhhhhhHHHHHHH--H
Q 037545          144 RVVRILRQIMEERRASSIVH-----NDMLDHLLRKE---------ESNYNLSDEETIDQVITILYSGYETVSTTLMM--A  207 (383)
Q Consensus       144 ~~~~~~~~~i~~~~~~~~~~-----~d~l~~ll~~~---------~~~~~l~~~~~~~~~~~~~~ag~~tt~~~l~~--~  207 (383)
                      ...+-|..++++|++.+..+     .+....|++.+         .........+.-..++..+.-...+++..|..  +
T Consensus         4 ~v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt~~~~~~IL~~~~l   83 (118)
T PRK13713          4 EVYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKTQSTVAKILGIESL   83 (118)
T ss_pred             HHHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence            44566777888888766522     23455555543         13345777777777777766666666665553  3


Q ss_pred             HHHHhhCHH
Q 037545          208 IKYLHDHPR  216 (383)
Q Consensus       208 l~~L~~~p~  216 (383)
                      .-++..+|.
T Consensus        84 sp~v~~~~~   92 (118)
T PRK13713         84 SPHVSGNPK   92 (118)
T ss_pred             cHhhcCCCc
Confidence            345555554


No 58 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=20.73  E-value=21  Score=27.14  Aligned_cols=20  Identities=30%  Similarity=0.710  Sum_probs=15.6

Q ss_pred             cccccCCCCCCcchHHHHHHH
Q 037545          323 CFVFGGGSRLCPGKELGIVQI  343 (383)
Q Consensus       323 ~~~Fg~G~r~C~G~~~a~~~~  343 (383)
                      |+- |++.|.||+..+|..-+
T Consensus        60 Yle-gss~~~CP~nE~avVrf   79 (146)
T PF04798_consen   60 YLE-GSSSVFCPPNEFAVVRF   79 (146)
T ss_pred             EEe-ccccccCCCCceEEEEE
Confidence            677 89999999887775544


No 59 
>TIGR01260 ATP_synt_c ATP synthase, F0 subunit c. This model describes the subunit c in F1/F0-ATP synthase, a membrane associated multisubunit complex found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The functional role of subunit c, which is the part of F0 cluster, has been delineated in-vitro reconstitution experiments. Overall experimental proof exists that demonstrate the electrochemical gradient is converted into a rotational torque that leads to ATP synthesis.
Probab=20.69  E-value=1.7e+02  Score=18.41  Aligned_cols=25  Identities=12%  Similarity=-0.044  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHH
Q 037545          201 STTLMMAIKYLHDHPRALKELRDEH  225 (383)
Q Consensus       201 ~~~l~~~l~~L~~~p~~~~~lr~Ei  225 (383)
                      +...+-.+--+++|||...+++.-.
T Consensus        10 G~i~~~a~~~iaRqPe~~~~l~~~~   34 (58)
T TIGR01260        10 GILGGKFLESAARQPELKPLLRTTM   34 (58)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            3455667778999999999988653


No 60 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=20.59  E-value=71  Score=29.33  Aligned_cols=44  Identities=25%  Similarity=0.308  Sum_probs=30.4

Q ss_pred             ChhHHHHHhhhhccCcCcccccccccccccccCEEeCCCCEEEee
Q 037545          246 MSFTRAVIFETSRLASIVNGVLRKTTKDIELNGFVVPKGWRIYVY  290 (383)
Q Consensus       246 lp~l~a~i~E~lRl~p~~~~~~R~~~~~~~l~g~~ip~G~~v~~~  290 (383)
                      -....|||.|+.-+.-.. .+-=...+|+.++|..||+||.|.-.
T Consensus       255 ~n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEEE
Confidence            455667888877666433 23334567899999999999986543


Done!