BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037546
(66 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|145343552|ref|XP_001416383.1| Ribosomal protein S28e [Ostreococcus lucimarinus CCE9901]
gi|144576608|gb|ABO94676.1| Ribosomal protein S28e [Ostreococcus lucimarinus CCE9901]
Length = 64
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
KKA V+KVIGRTGSRGQVTQVRV+F+DD RQI RNVKGPVR GDILTL+ESEREARRLR
Sbjct: 5 KKAIVMKVIGRTGSRGQVTQVRVKFLDDQNRQIMRNVKGPVREGDILTLMESEREARRLR 64
>gi|218184502|gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indica Group]
Length = 400
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 56/73 (76%), Gaps = 7/73 (9%)
Query: 1 MDTGGP-------KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDIL 53
MD P K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDIL
Sbjct: 328 MDNSSPGRMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDIL 387
Query: 54 TLLESEREARRLR 66
TLLESEREARRLR
Sbjct: 388 TLLESEREARRLR 400
>gi|356503875|ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
Length = 105
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 46 KHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLR 105
>gi|297739775|emb|CBI29957.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 54/62 (87%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
G K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARR
Sbjct: 50 GVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARR 109
Query: 65 LR 66
LR
Sbjct: 110 LR 111
>gi|116778536|gb|ABK20899.1| unknown [Picea sitchensis]
gi|116778837|gb|ABK21020.1| unknown [Picea sitchensis]
gi|116779805|gb|ABK21436.1| unknown [Picea sitchensis]
gi|116779938|gb|ABK21486.1| unknown [Picea sitchensis]
gi|116779954|gb|ABK21493.1| unknown [Picea sitchensis]
gi|116779984|gb|ABK21504.1| unknown [Picea sitchensis]
gi|116780339|gb|ABK21639.1| unknown [Picea sitchensis]
gi|116780954|gb|ABK21897.1| unknown [Picea sitchensis]
gi|116788726|gb|ABK24977.1| unknown [Picea sitchensis]
gi|116790627|gb|ABK25683.1| unknown [Picea sitchensis]
gi|148906383|gb|ABR16346.1| unknown [Picea sitchensis]
gi|148907364|gb|ABR16816.1| unknown [Picea sitchensis]
gi|148907622|gb|ABR16940.1| unknown [Picea sitchensis]
gi|148908891|gb|ABR17550.1| unknown [Picea sitchensis]
gi|148908941|gb|ABR17575.1| unknown [Picea sitchensis]
gi|148909740|gb|ABR17961.1| unknown [Picea sitchensis]
gi|148910472|gb|ABR18311.1| unknown [Picea sitchensis]
gi|148910818|gb|ABR18475.1| unknown [Picea sitchensis]
gi|224285480|gb|ACN40462.1| unknown [Picea sitchensis]
gi|224286119|gb|ACN40770.1| unknown [Picea sitchensis]
Length = 65
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDTG K A V+KVIGRTGSRGQVTQVRV+F+DD R I RNVKGPVR GD+LTLLESER
Sbjct: 1 MDTG-VKLAVVVKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDVLTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|357496579|ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e [Medicago truncatula]
Length = 75
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 16 KHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLR 75
>gi|328353488|emb|CCA39886.1| Probable urea active transporter 2 [Komagataella pastoris CBS 7435]
Length = 769
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGPKK-ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F+DD+ R I RNVKGPVR DIL L+ESE
Sbjct: 703 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDSSRTIVRNVKGPVRENDILCLMESE 762
Query: 60 REARRLR 66
REARRLR
Sbjct: 763 REARRLR 769
>gi|124359133|gb|ABD32492.2| Ribosomal protein S28e [Medicago truncatula]
gi|388522463|gb|AFK49293.1| unknown [Medicago truncatula]
Length = 65
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|356505487|ref|XP_003521522.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
gi|356549946|ref|XP_003543351.1| PREDICTED: 40S ribosomal protein S28 [Glycine max]
gi|356572706|ref|XP_003554507.1| PREDICTED: 40S ribosomal protein S28-like isoform 1 [Glycine max]
gi|356572708|ref|XP_003554508.1| PREDICTED: 40S ribosomal protein S28-like isoform 2 [Glycine max]
gi|356572714|ref|XP_003554511.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
gi|255628293|gb|ACU14491.1| unknown [Glycine max]
Length = 65
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|357474797|ref|XP_003607684.1| 40S ribosomal protein S28 [Medicago truncatula]
gi|355508739|gb|AES89881.1| 40S ribosomal protein S28 [Medicago truncatula]
Length = 221
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KVIGRTGSRGQVTQVRV+F DD+ R I RNVKGPVR GD LTLLESEREARRLR
Sbjct: 162 KNAVVVKVIGRTGSRGQVTQVRVKFNDDSNRHIMRNVKGPVREGDTLTLLESEREARRLR 221
>gi|225441581|ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [Vitis vinifera]
Length = 65
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 54/62 (87%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
G K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARR
Sbjct: 4 GVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARR 63
Query: 65 LR 66
LR
Sbjct: 64 LR 65
>gi|308806289|ref|XP_003080456.1| S28 ribosomal protein (ISS) [Ostreococcus tauri]
gi|116058916|emb|CAL54623.1| S28 ribosomal protein (ISS) [Ostreococcus tauri]
Length = 73
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/59 (83%), Positives = 54/59 (91%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+A V+KVIGRTGSRGQVTQVRV+F+DD RQI RNVKGPVR GDILTL+ESEREARRLR
Sbjct: 15 RAIVMKVIGRTGSRGQVTQVRVKFLDDQNRQIMRNVKGPVREGDILTLMESEREARRLR 73
>gi|449477088|ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
Length = 68
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 9 KHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESEREARRLR 68
>gi|255071185|ref|XP_002507674.1| predicted protein [Micromonas sp. RCC299]
gi|303274256|ref|XP_003056450.1| ribosomal protein S28e [Micromonas pusilla CCMP1545]
gi|226462534|gb|EEH59826.1| ribosomal protein S28e [Micromonas pusilla CCMP1545]
gi|226522949|gb|ACO68932.1| predicted protein [Micromonas sp. RCC299]
Length = 64
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 54/60 (90%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KVIGRTGSRGQVTQVRV+F+DD RQI RNVKGPVR GDILTL+ESEREARRLR
Sbjct: 5 KLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRQIMRNVKGPVREGDILTLMESEREARRLR 64
>gi|157690780|tpe|CAL69117.1| TPA: putative 40S ribosomal protein S28 isoform 2 [Spadella
cephaloptera]
Length = 64
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 53/61 (86%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
PK A V KV+GRTGS+GQ TQVRV+F+DDT R I RNVKGPVR GDILTLLESEREARRL
Sbjct: 4 PKLAKVTKVLGRTGSQGQCTQVRVEFLDDTNRSIIRNVKGPVREGDILTLLESEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|147820340|emb|CAN63104.1| hypothetical protein VITISV_038369 [Vitis vinifera]
Length = 62
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 54/62 (87%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
G K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARR
Sbjct: 1 GVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARR 60
Query: 65 LR 66
LR
Sbjct: 61 LR 62
>gi|449440915|ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440917|ref|XP_004138230.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440919|ref|XP_004138231.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440921|ref|XP_004138232.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449463340|ref|XP_004149392.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449463342|ref|XP_004149393.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449477091|ref|XP_004154926.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449477094|ref|XP_004154927.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449477096|ref|XP_004154928.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449477100|ref|XP_004154929.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449503792|ref|XP_004162179.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449503794|ref|XP_004162180.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449503796|ref|XP_004162181.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
Length = 65
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|168012108|ref|XP_001758744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168059761|ref|XP_001781869.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666676|gb|EDQ53324.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689881|gb|EDQ76250.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 65
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KVIGRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESER
Sbjct: 1 MDTA-VKLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|218192158|gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indica Group]
Length = 101
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESER
Sbjct: 37 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESER 95
Query: 61 EARRLR 66
EARRLR
Sbjct: 96 EARRLR 101
>gi|357151696|ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831577 [Brachypodium
distachyon]
Length = 554
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGP+R GDILTLLESEREARRLR
Sbjct: 495 KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILTLLESEREARRLR 554
>gi|157690778|tpe|CAL69116.1| TPA: putative 40S ribosomal protein S28 isoform 1 [Spadella
cephaloptera]
Length = 64
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 53/61 (86%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
PK A V KV+GRTGS+GQ TQVRV+F+DDT R I RNVKGPVR GDILTLLESEREARRL
Sbjct: 4 PKLAKVTKVLGRTGSQGQCTQVRVEFIDDTNRSIIRNVKGPVREGDILTLLESEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|357151693|ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 115
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGP+R GDILTLLESEREARRLR
Sbjct: 56 KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILTLLESEREARRLR 115
>gi|3947719|emb|CAA10101.1| ribosomal protein S28 [Prunus persica]
gi|3947721|emb|CAA10102.1| ribosomal protein S28 [Prunus persica]
gi|3947723|emb|CAA10103.1| ribosomal protein S28 [Prunus persica]
Length = 65
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|168006885|ref|XP_001756139.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015215|ref|XP_001760146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168056897|ref|XP_001780454.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668130|gb|EDQ54744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688526|gb|EDQ74902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692649|gb|EDQ79005.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 65
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KVIGRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|159465687|ref|XP_001691054.1| ribosomal protein S28, component of cytosolic 80S ribosome and
40S small subunit [Chlamydomonas reinhardtii]
gi|158279740|gb|EDP05500.1| ribosomal protein S28 [Chlamydomonas reinhardtii]
Length = 65
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KVIGRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|40287500|gb|AAR83864.1| 28 kDa small subunit ribosomal protein [Capsicum annuum]
Length = 65
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+K++GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKIMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|302833207|ref|XP_002948167.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300266387|gb|EFJ50574.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 64
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KVIGRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 5 KLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 64
>gi|414865011|tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays]
Length = 103
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESER
Sbjct: 39 MDTQV-KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESER 97
Query: 61 EARRLR 66
EARRLR
Sbjct: 98 EARRLR 103
>gi|414865012|tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays]
Length = 68
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESER
Sbjct: 4 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESER 62
Query: 61 EARRLR 66
EARRLR
Sbjct: 63 EARRLR 68
>gi|384247236|gb|EIE20723.1| ribosomal protein S28e [Coccomyxa subellipsoidea C-169]
Length = 65
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KVIGRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|255559537|ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
gi|255581574|ref|XP_002531592.1| ribosomal protein S28, putative [Ricinus communis]
gi|223528788|gb|EEF30795.1| ribosomal protein S28, putative [Ricinus communis]
gi|223539919|gb|EEF41497.1| ribosomal protein S28, putative [Ricinus communis]
gi|313586485|gb|ADR71253.1| 40S ribosomal protein S28A [Hevea brasiliensis]
gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B [Hevea brasiliensis]
Length = 65
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLTLLESEREARRLR 65
>gi|115481982|ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group]
gi|226492207|ref|NP_001147283.1| 40S ribosomal protein S28 [Zea mays]
gi|226528567|ref|NP_001147474.1| 40S ribosomal protein S28 [Zea mays]
gi|226530547|ref|NP_001147106.1| 40S ribosomal protein S28 [Zea mays]
gi|297600386|ref|NP_001049079.2| Os03g0167100 [Oryza sativa Japonica Group]
gi|242042107|ref|XP_002468448.1| hypothetical protein SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|313103646|pdb|3IZ6|Y Chain Y, Localization Of The Small Subunit Ribosomal Proteins
Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
Translating 80s Ribosome
gi|113639193|dbj|BAF26498.1| Os10g0411700 [Oryza sativa Japonica Group]
gi|194704454|gb|ACF86311.1| unknown [Zea mays]
gi|195605026|gb|ACG24343.1| 40S ribosomal protein S28 [Zea mays]
gi|195605034|gb|ACG24347.1| 40S ribosomal protein S28 [Zea mays]
gi|195607258|gb|ACG25459.1| 40S ribosomal protein S28 [Zea mays]
gi|195609472|gb|ACG26566.1| 40S ribosomal protein S28 [Zea mays]
gi|195609816|gb|ACG26738.1| 40S ribosomal protein S28 [Zea mays]
gi|195610066|gb|ACG26863.1| 40S ribosomal protein S28 [Zea mays]
gi|195611640|gb|ACG27650.1| 40S ribosomal protein S28 [Zea mays]
gi|195618106|gb|ACG30883.1| 40S ribosomal protein S28 [Zea mays]
gi|195618338|gb|ACG30999.1| 40S ribosomal protein S28 [Zea mays]
gi|195618690|gb|ACG31175.1| 40S ribosomal protein S28 [Zea mays]
gi|195619662|gb|ACG31661.1| 40S ribosomal protein S28 [Zea mays]
gi|195620148|gb|ACG31904.1| 40S ribosomal protein S28 [Zea mays]
gi|195655603|gb|ACG47269.1| 40S ribosomal protein S28 [Zea mays]
gi|195655989|gb|ACG47462.1| 40S ribosomal protein S28 [Zea mays]
gi|222612816|gb|EEE50948.1| hypothetical protein OsJ_31495 [Oryza sativa Japonica Group]
gi|241922302|gb|EER95446.1| hypothetical protein SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|255674234|dbj|BAF10993.2| Os03g0167100 [Oryza sativa Japonica Group]
gi|326509929|dbj|BAJ87180.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526071|dbj|BAJ93212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|413956006|gb|AFW88655.1| 40S ribosomal protein S28 isoform 1 [Zea mays]
gi|413956007|gb|AFW88656.1| 40S ribosomal protein S28 isoform 2 [Zea mays]
gi|414865013|tpg|DAA43570.1| TPA: 40S ribosomal protein S28 [Zea mays]
gi|414866364|tpg|DAA44921.1| TPA: 40S ribosomal protein S28 isoform 1 [Zea mays]
gi|414866365|tpg|DAA44922.1| TPA: 40S ribosomal protein S28 isoform 2 [Zea mays]
gi|414866366|tpg|DAA44923.1| TPA: 40S ribosomal protein S28 isoform 3 [Zea mays]
gi|414866367|tpg|DAA44924.1| TPA: 40S ribosomal protein S28 isoform 4 [Zea mays]
Length = 65
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESER
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|405960672|gb|EKC26570.1| 40S ribosomal protein S28 [Crassostrea gigas]
Length = 67
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD P K A V+KV+GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GDILTLLESE
Sbjct: 1 MDKLQPVKLAKVLKVLGRTGSQGQCTQVRVEFLDDSNRSIIRNVKGPVREGDILTLLESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|30267871|gb|AAP21778.1| ribosomal protein S28 [Branchiostoma belcheri tsingtauense]
gi|116805067|gb|ABK27630.1| ribosomal protein S28 [Branchiostoma belcheri]
Length = 68
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
Query: 1 MDTG-GPKK-ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLES 58
MD G P+K A V KV+GRTGS+GQ TQVRV+FMDD+ R I RNVKGPVR GDILTLLES
Sbjct: 1 MDRGVAPQKLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDILTLLES 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|222624255|gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japonica Group]
Length = 93
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 34 KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 93
>gi|224100565|ref|XP_002311925.1| predicted protein [Populus trichocarpa]
gi|224110082|ref|XP_002315409.1| predicted protein [Populus trichocarpa]
gi|118481584|gb|ABK92734.1| unknown [Populus trichocarpa]
gi|118481768|gb|ABK92823.1| unknown [Populus trichocarpa]
gi|118482102|gb|ABK92982.1| unknown [Populus trichocarpa]
gi|118482699|gb|ABK93268.1| unknown [Populus trichocarpa]
gi|222851745|gb|EEE89292.1| predicted protein [Populus trichocarpa]
gi|222864449|gb|EEF01580.1| predicted protein [Populus trichocarpa]
Length = 65
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+K++GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|357146799|ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium
distachyon]
Length = 65
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGP+R GDILTLLESER
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|223646392|gb|ACN09954.1| 40S ribosomal protein S28 [Salmo salar]
gi|223672239|gb|ACN12301.1| 40S ribosomal protein S28 [Salmo salar]
Length = 147
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDD+ R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 88 KLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDVLTLLESEREARRLR 147
>gi|32400865|gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
Length = 86
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 27 KLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 86
>gi|395741610|ref|XP_003777611.1| PREDICTED: 40S ribosomal protein S28-like [Pongo abelii]
Length = 112
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 53 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 112
>gi|359474713|ref|XP_003631521.1| PREDICTED: 40S ribosomal protein S28 [Vitis vinifera]
Length = 65
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 53/63 (84%)
Query: 4 GGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
G K A V+KV+GRT SRGQVTQ+RV+F+DD R I RNVKGPVR GDILTLLESEREAR
Sbjct: 3 SGVKHAMVVKVMGRTSSRGQVTQMRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREAR 62
Query: 64 RLR 66
RLR
Sbjct: 63 RLR 65
>gi|384489943|gb|EIE81165.1| 40S ribosomal protein S28 [Rhizopus delemar RA 99-880]
gi|384491492|gb|EIE82688.1| 40S ribosomal protein S28 [Rhizopus delemar RA 99-880]
gi|384498203|gb|EIE88694.1| 40S ribosomal protein S28 [Rhizopus delemar RA 99-880]
Length = 67
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/67 (77%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P K A V KV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESE
Sbjct: 1 MDTKTPVKLARVTKVLGRTGSRGGVTQVRVEFMDDTNRSIIRNVKGPVRENDILCLLESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|330318585|gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
Length = 65
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 6 KHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLTLLESEREARRLR 65
>gi|405119858|gb|AFR94629.1| ribosomal protein S28e [Cryptococcus neoformans var. grubii H99]
Length = 70
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 11 KLARVLKVLGRTGSRGGVTQVRVEFMDDSNRSIIRNVKGPVRVNDILALLESEREARRLR 70
>gi|21902507|gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Helianthus annuus]
Length = 65
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GR+GSRGQVTQVRV+F+DD R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRSGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLTLLESEREARRLR 65
>gi|37951023|emb|CAD86893.1| CG15527 [Drosophila simulans]
gi|37951029|emb|CAD86896.1| CG15527 [Drosophila simulans]
gi|37951037|emb|CAD86900.1| CG15527 [Drosophila simulans]
gi|37951041|emb|CAD86902.1| CG15527 [Drosophila simulans]
Length = 64
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 54/61 (88%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+K+IGRTGS+GQ TQVRV+F+ D RQI RNVKGPVRVGDIL+LLE+EREARRL
Sbjct: 4 PQYARVVKIIGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|328769392|gb|EGF79436.1| hypothetical protein BATDEDRAFT_12294, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 60
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DILTLLESEREARRLR
Sbjct: 1 KLAKVVKVLGRTGSRGGVTQVRVEFMDDTNRSIIRNVKGPVRENDILTLLESEREARRLR 60
>gi|224138170|ref|XP_002322747.1| predicted protein [Populus trichocarpa]
gi|118481467|gb|ABK92676.1| unknown [Populus trichocarpa]
gi|118485130|gb|ABK94428.1| unknown [Populus trichocarpa]
gi|222867377|gb|EEF04508.1| predicted protein [Populus trichocarpa]
Length = 65
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+K++GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 6 KHAVVMKIMGRTGSRGQVTQVRVKFLDDPNRFIMRNVKGPVREGDVLTLLESEREARRLR 65
>gi|390478490|ref|XP_002761730.2| PREDICTED: 40S ribosomal protein S28-like, partial [Callithrix
jacchus]
Length = 92
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 33 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 92
>gi|307103908|gb|EFN52165.1| hypothetical protein CHLNCDRAFT_27155 [Chlorella variabilis]
Length = 66
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 7 KLAIVMKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESEREARRLR 66
>gi|45268967|gb|AAS55896.1| 40S ribosomal protein S28, partial [Sus scrofa]
Length = 80
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 21 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 80
>gi|198438100|ref|XP_002131985.1| PREDICTED: similar to ribosomal protein S28 [Ciona intestinalis]
Length = 68
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 52/61 (85%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V KV+GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GDILTLLESEREARRL
Sbjct: 8 AKLAKVTKVVGRTGSQGQCTQVRVEFLDDSSRSIVRNVKGPVREGDILTLLESEREARRL 67
Query: 66 R 66
R
Sbjct: 68 R 68
>gi|195341405|ref|XP_002037300.1| GM12191 [Drosophila sechellia]
gi|194131416|gb|EDW53459.1| GM12191 [Drosophila sechellia]
Length = 136
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ A V+K+IGRTGS+GQ TQVRV+F+ D RQI RNVKGPVRVGDIL+LLE+EREARRLR
Sbjct: 77 EYACVVKIIGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRLR 136
>gi|4506715|ref|NP_001022.1| 40S ribosomal protein S28 [Homo sapiens]
gi|21426821|ref|NP_058540.1| 40S ribosomal protein S28 [Mus musculus]
gi|48597082|ref|NP_001001587.1| 40S ribosomal protein S28 [Sus scrofa]
gi|70778960|ref|NP_001020487.1| 40S ribosomal protein S28 [Bos taurus]
gi|157787127|ref|NP_001099200.1| 40S ribosomal protein S28 [Rattus norvegicus]
gi|301172794|ref|NP_001180365.1| ribosomal protein S28 [Macaca mulatta]
gi|350534952|ref|NP_001232403.1| putative ribosomal protein S28 [Taeniopygia guttata]
gi|73987191|ref|XP_542128.2| PREDICTED: 40S ribosomal protein S28 [Canis lupus familiaris]
gi|149716415|ref|XP_001498263.1| PREDICTED: 40S ribosomal protein S28-like [Equus caballus]
gi|291411553|ref|XP_002722043.1| PREDICTED: ribosomal protein S28-like [Oryctolagus cuniculus]
gi|297703402|ref|XP_002828630.1| PREDICTED: 40S ribosomal protein S28 [Pongo abelii]
gi|301785974|ref|XP_002928400.1| PREDICTED: 40S ribosomal protein S28-like [Ailuropoda
melanoleuca]
gi|344299318|ref|XP_003421333.1| PREDICTED: 40S ribosomal protein S28-like [Loxodonta africana]
gi|348551248|ref|XP_003461442.1| PREDICTED: 40S ribosomal protein S28-like [Cavia porcellus]
gi|354496883|ref|XP_003510553.1| PREDICTED: 40S ribosomal protein S28-like [Cricetulus griseus]
gi|363743624|ref|XP_001231865.2| PREDICTED: 40S ribosomal protein S28 [Gallus gallus]
gi|397477339|ref|XP_003810030.1| PREDICTED: 40S ribosomal protein S28 [Pan paniscus]
gi|403296085|ref|XP_003938951.1| PREDICTED: 40S ribosomal protein S28 [Saimiri boliviensis
boliviensis]
gi|410053107|ref|XP_003953392.1| PREDICTED: 40S ribosomal protein S28 [Pan troglodytes]
gi|410950275|ref|XP_003981835.1| PREDICTED: 40S ribosomal protein S28 [Felis catus]
gi|426229067|ref|XP_004008615.1| PREDICTED: 40S ribosomal protein S28 [Ovis aries]
gi|426387012|ref|XP_004059972.1| PREDICTED: 40S ribosomal protein S28 [Gorilla gorilla gorilla]
gi|51316555|sp|Q6QAT1.2|RS28_PIG RecName: Full=40S ribosomal protein S28
gi|51338623|sp|P62859.1|RS28_RAT RecName: Full=40S ribosomal protein S28
gi|51338652|sp|P62857.1|RS28_HUMAN RecName: Full=40S ribosomal protein S28
gi|51338653|sp|P62858.1|RS28_MOUSE RecName: Full=40S ribosomal protein S28
gi|75052081|sp|Q56JX6.1|RS28_BOVIN RecName: Full=40S ribosomal protein S28
gi|57726|emb|CAA41967.1| ribosomal protein S28 [Rattus rattus]
gi|337403|gb|AAC15855.1| ribosomal protein S28 [Homo sapiens]
gi|508266|gb|AAA19605.1| ribosomal protein S28 [Mus musculus]
gi|1518637|gb|AAB07066.1| ribosomal protein S28 [Homo sapiens]
gi|4050094|gb|AAC97967.1| RPS28 [Mus musculus]
gi|12653173|gb|AAH00354.1| Ribosomal protein S28 [Homo sapiens]
gi|12833257|dbj|BAB22456.1| unnamed protein product [Mus musculus]
gi|15012158|gb|AAH10987.1| Ribosomal protein S28 [Mus musculus]
gi|17932986|dbj|BAB79484.1| ribosomal protein S28 [Homo sapiens]
gi|18203803|gb|AAH21239.1| Ribosomal protein S28 [Homo sapiens]
gi|27502089|gb|AAO17375.1| RPS28 protein [Mus musculus]
gi|47682773|gb|AAH70217.1| Ribosomal protein S28 [Homo sapiens]
gi|47683011|gb|AAH70218.1| Ribosomal protein S28 [Homo sapiens]
gi|48146227|emb|CAG33336.1| RPS28 [Homo sapiens]
gi|58760420|gb|AAW82119.1| ribosomal protein S28 [Bos taurus]
gi|60688131|gb|AAH90982.1| Rps28 protein [Mus musculus]
gi|61359175|gb|AAX41679.1| ribosomal protein S28 [synthetic construct]
gi|74267750|gb|AAI02566.1| Ribosomal protein S28 [Bos taurus]
gi|116138409|gb|AAI25647.1| Rps28 protein [Mus musculus]
gi|116138582|gb|AAI25645.1| Ribosomal protein S28 [Mus musculus]
gi|119589339|gb|EAW68933.1| ribosomal protein S28, isoform CRA_a [Homo sapiens]
gi|119589340|gb|EAW68934.1| ribosomal protein S28, isoform CRA_a [Homo sapiens]
gi|119595478|gb|EAW75072.1| hCG26477 [Homo sapiens]
gi|123980908|gb|ABM82283.1| ribosomal protein S28 [synthetic construct]
gi|123995725|gb|ABM85464.1| ribosomal protein S28 [synthetic construct]
gi|148678265|gb|EDL10212.1| mCG22987, isoform CRA_a [Mus musculus]
gi|148678266|gb|EDL10213.1| mCG22987, isoform CRA_a [Mus musculus]
gi|149031655|gb|EDL86618.1| rCG37553 [Rattus norvegicus]
gi|189065143|dbj|BAG34866.1| unnamed protein product [Homo sapiens]
gi|197127422|gb|ACH43920.1| putative 40S ribosomal protein S28 variant 1 [Taeniopygia
guttata]
gi|197127423|gb|ACH43921.1| putative 40S ribosomal protein S28 variant 1 [Taeniopygia
guttata]
gi|197129910|gb|ACH46408.1| putative ribosomal protein S28 [Taeniopygia guttata]
gi|223987581|gb|ACN32244.1| ribosomal protein S28 [Ailuropoda melanoleuca]
gi|223987583|gb|ACN32245.1| ribosomal protein S28 [Ailuropoda melanoleuca]
gi|281342861|gb|EFB18445.1| hypothetical protein PANDA_018335 [Ailuropoda melanoleuca]
gi|296485733|tpg|DAA27848.1| TPA: 40S ribosomal protein S28 [Bos taurus]
gi|344244039|gb|EGW00143.1| 40S ribosomal protein S28 [Cricetulus griseus]
gi|351701314|gb|EHB04233.1| 40S ribosomal protein S28 [Heterocephalus glaber]
gi|355764135|gb|EHH62255.1| hypothetical protein EGM_20522 [Macaca fascicularis]
gi|387018374|gb|AFJ51305.1| 40S ribosomal protein S28-like [Crotalus adamanteus]
gi|387539214|gb|AFJ70234.1| 40S ribosomal protein S28 [Macaca mulatta]
gi|440910200|gb|ELR60025.1| 40S ribosomal protein S28 [Bos grunniens mutus]
Length = 69
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 69
>gi|402869676|ref|XP_003898875.1| PREDICTED: 40S ribosomal protein S28-like [Papio anubis]
gi|402869678|ref|XP_003898876.1| PREDICTED: 40S ribosomal protein S28-like [Papio anubis]
gi|402869680|ref|XP_003898877.1| PREDICTED: 40S ribosomal protein S28-like [Papio anubis]
Length = 69
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 69
>gi|195505030|ref|XP_002099333.1| GE23424 [Drosophila yakuba]
gi|194185434|gb|EDW99045.1| GE23424 [Drosophila yakuba]
Length = 64
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 53/61 (86%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+KV+GRTGSRGQ TQVRV+F+ D RQI RNVKGPVR GDIL+LLESEREAR+L
Sbjct: 4 PQYARVVKVLGRTGSRGQCTQVRVEFLGDQNRQIIRNVKGPVREGDILSLLESEREARKL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|302771153|ref|XP_002968995.1| hypothetical protein SELMODRAFT_170205 [Selaginella
moellendorffii]
gi|302817967|ref|XP_002990658.1| hypothetical protein SELMODRAFT_185434 [Selaginella
moellendorffii]
gi|300141580|gb|EFJ08290.1| hypothetical protein SELMODRAFT_185434 [Selaginella
moellendorffii]
gi|300163500|gb|EFJ30111.1| hypothetical protein SELMODRAFT_170205 [Selaginella
moellendorffii]
Length = 65
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KVIGRTGSRGQVTQVRV+F+DD R I RNVKGP+R GDILTLLESEREARRLR
Sbjct: 6 KLAIVTKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILTLLESEREARRLR 65
>gi|148676007|gb|EDL07954.1| mCG49140 [Mus musculus]
Length = 69
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDMLTLLESEREARRLR 69
>gi|167534403|ref|XP_001748877.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772557|gb|EDQ86207.1| predicted protein [Monosiga brevicollis MX1]
Length = 65
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 53/61 (86%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
PK A V KV+GRTGS+GQ QVRV+F+DDT+R I RNVKGPVRVGDIL L+ESEREARR+
Sbjct: 5 PKLAKVTKVLGRTGSQGQAIQVRVEFIDDTQRSILRNVKGPVRVGDILVLMESEREARRM 64
Query: 66 R 66
R
Sbjct: 65 R 65
>gi|225556120|gb|EEH04410.1| hypothetical protein HCBG_07635 [Ajellomyces capsulatus G186AR]
Length = 131
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MD G K A V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLE
Sbjct: 63 MDASGKVPIKFAKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLE 122
Query: 58 SEREARRLR 66
SEREARRLR
Sbjct: 123 SEREARRLR 131
>gi|295656830|ref|XP_002788999.1| 40S ribosomal protein S28 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285445|gb|EEH41011.1| hypothetical protein PAAG_09096 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 69
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MDT G K A V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLE
Sbjct: 1 MDTSGKVPIKFAKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLE 60
Query: 58 SEREARRLR 66
SEREARRLR
Sbjct: 61 SEREARRLR 69
>gi|37951025|emb|CAD86894.1| CG15527 [Drosophila simulans]
gi|37951033|emb|CAD86898.1| CG15527 [Drosophila simulans]
Length = 64
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+K+IGRTGS+GQ TQV+V+F+ D RQI RNVKGPVRVGDIL+LLE+EREARRL
Sbjct: 4 PQNARVVKIIGRTGSQGQCTQVQVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|412990276|emb|CCO19594.1| 40S ribosomal protein S28 [Bathycoccus prasinos]
Length = 55
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 51/55 (92%)
Query: 12 IKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+KVIGRTGSRGQVTQVRV+F+DD RQI RNVKGPVR GDILTL+ESEREARRLR
Sbjct: 1 MKVIGRTGSRGQVTQVRVKFLDDQNRQIMRNVKGPVREGDILTLMESEREARRLR 55
>gi|392333183|ref|XP_002725057.2| PREDICTED: uncharacterized protein LOC100364368 [Rattus norvegicus]
Length = 215
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR D+LTLLESEREARRLR
Sbjct: 156 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRESDVLTLLESEREARRLR 215
>gi|2739219|emb|CAA04565.1| rpS28 [Hordeum vulgare subsp. vulgare]
Length = 65
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+D R I RNVKGPVR GDILTLLESER
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDHQNRLIMRNVKGPVREGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|62858613|ref|NP_001016950.1| ribosomal protein S28 pseudogene 9 [Xenopus (Silurana)
tropicalis]
gi|147901035|ref|NP_001087354.1| ribosomal protein S28 pseudogene 9 [Xenopus laevis]
gi|51873955|gb|AAH78605.1| MGC85550 protein [Xenopus laevis]
gi|71051186|gb|AAH99294.1| MGC85550 protein [Xenopus laevis]
gi|111598460|gb|AAH80501.1| hypothetical protein LOC549704 [Xenopus (Silurana) tropicalis]
Length = 69
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDD+ R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDVLTLLESEREARRLR 69
>gi|119177117|ref|XP_001240376.1| 40S ribosomal protein S28 [Coccidioides immitis RS]
gi|303316171|ref|XP_003068090.1| 40S ribosomal protein S28 [Coccidioides posadasii C735 delta
SOWgp]
gi|240107766|gb|EER25945.1| 40S ribosomal protein S28, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320032463|gb|EFW14416.1| hypothetical protein CPSG_09004 [Coccidioides posadasii str.
Silveira]
gi|392867659|gb|EAS29088.2| 40S ribosomal protein S28 [Coccidioides immitis RS]
Length = 69
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MD G K A V V+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVRV DIL LLE
Sbjct: 1 MDAAGKVPVKYARVTSVLGRTGSRGGVTQVRVEFMDDSHRSIIRNVKGPVRVNDILCLLE 60
Query: 58 SEREARRLR 66
SEREARRLR
Sbjct: 61 SEREARRLR 69
>gi|37951015|emb|CAD86889.1| CG15527 [Drosophila simulans]
gi|37951019|emb|CAD86891.1| CG15527 [Drosophila simulans]
gi|37951031|emb|CAD86897.1| CG15527 [Drosophila simulans]
gi|37951039|emb|CAD86901.1| CG15527 [Drosophila simulans]
Length = 64
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+K+IGRTGS+GQ TQV+V+F+ D RQI RNVKGPVRVGDIL+LLE+EREARRL
Sbjct: 4 PQYARVVKIIGRTGSQGQCTQVQVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|57526731|ref|NP_998199.1| 40S ribosomal protein S28 [Danio rerio]
gi|318264372|ref|NP_001187089.1| 40S ribosomal protein S28 [Ictalurus punctatus]
gi|348500512|ref|XP_003437817.1| PREDICTED: 40S ribosomal protein S28-like isoform 1 [Oreochromis
niloticus]
gi|348500514|ref|XP_003437818.1| PREDICTED: 40S ribosomal protein S28-like isoform 2 [Oreochromis
niloticus]
gi|432911754|ref|XP_004078706.1| PREDICTED: 40S ribosomal protein S28-like [Oryzias latipes]
gi|22001967|sp|Q90YP3.1|RS28_ICTPU RecName: Full=40S ribosomal protein S28
gi|51316653|sp|Q6PBK3.1|RS28_DANRE RecName: Full=40S ribosomal protein S28
gi|15294073|gb|AAK95213.1|AF402839_1 40S ribosomal protein S28 [Ictalurus punctatus]
gi|37748008|gb|AAH59677.1| Zgc:73367 [Danio rerio]
gi|124300845|dbj|BAF45918.1| ribosomal protein S28 [Solea senegalensis]
gi|209733608|gb|ACI67673.1| 40S ribosomal protein S28 [Salmo salar]
gi|209737176|gb|ACI69457.1| 40S ribosomal protein S28 [Salmo salar]
gi|223646430|gb|ACN09973.1| 40S ribosomal protein S28 [Salmo salar]
gi|223672277|gb|ACN12320.1| 40S ribosomal protein S28 [Salmo salar]
gi|225711112|gb|ACO11402.1| 40S ribosomal protein S28 [Caligus rogercresseyi]
gi|225716510|gb|ACO14101.1| 40S ribosomal protein S28 [Esox lucius]
gi|229366522|gb|ACQ58241.1| 40S ribosomal protein S28 [Anoplopoma fimbria]
gi|308324395|gb|ADO29332.1| 40S ribosomal protein s28 [Ictalurus punctatus]
Length = 69
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDD+ R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDVLTLLESEREARRLR 69
>gi|37951017|emb|CAD86890.1| CG15527 [Drosophila simulans]
gi|37951027|emb|CAD86895.1| CG15527 [Drosophila simulans]
gi|37951035|emb|CAD86899.1| CG15527 [Drosophila simulans]
Length = 64
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+K+IGRTGS+GQ TQV+V+F+ D RQI RNVKGPVRVGDIL+LLE+EREARRL
Sbjct: 4 PQYARVVKIIGRTGSQGQCTQVQVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|115746711|ref|XP_001200730.1| PREDICTED: 40S ribosomal protein S28-like [Strongylocentrotus
purpuratus]
Length = 65
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KLAKVTKVLGRTGSQGQCTQVRVEFLDDSNRSIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|162463939|ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays]
gi|1173237|sp|P46302.1|RS28_MAIZE RecName: Full=40S ribosomal protein S28
gi|557682|emb|CAA57636.1| small subunit ribosomal protein S28 [Zea mays]
Length = 65
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPV GDILTLLESER
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVCEGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|313236164|emb|CBY11488.1| unnamed protein product [Oikopleura dioica]
gi|313240143|emb|CBY32494.1| unnamed protein product [Oikopleura dioica]
Length = 68
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V V+GRTGS+GQ TQV+V+F+DDTKR I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 9 KLAKVTDVLGRTGSQGQCTQVKVEFLDDTKRSIIRNVKGPVREGDILTLLESEREARRLR 68
>gi|195618510|gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV+F+DD R I RNVKGPVR GDILTLLESE
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILTLLESET 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|19075843|ref|NP_588343.1| 40S ribosomal protein S28 [Schizosaccharomyces pombe 972h-]
gi|19115438|ref|NP_594526.1| 40S ribosomal protein S28 [Schizosaccharomyces pombe 972h-]
gi|213406339|ref|XP_002173941.1| 40S ribosomal protein S28 [Schizosaccharomyces japonicus yFS275]
gi|213410114|ref|XP_002175827.1| 40S ribosomal protein S28 [Schizosaccharomyces japonicus yFS275]
gi|1710760|sp|Q10421.1|RS28_SCHPO RecName: Full=40S ribosomal protein S28; AltName: Full=S33
gi|1256529|emb|CAA94635.1| 40S ribosomal protein S28 (predicted) [Schizosaccharomyces pombe]
gi|3581915|emb|CAA20854.1| 40S ribosomal protein S28, Rps2802 [Schizosaccharomyces pombe]
gi|212001988|gb|EEB07648.1| 40S ribosomal protein S28 [Schizosaccharomyces japonicus yFS275]
gi|212003874|gb|EEB09534.1| 40S ribosomal protein S28 [Schizosaccharomyces japonicus yFS275]
Length = 68
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVREDDILVLLESEREARRLR 68
>gi|296420310|ref|XP_002839718.1| 40S ribosomal protein S28 [Tuber melanosporum Mel28]
gi|295635912|emb|CAZ83909.1| unnamed protein product [Tuber melanosporum]
Length = 68
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 1 MDTG--GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLES 58
MD+G K VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLES
Sbjct: 1 MDSGKAAVKLVKVIKVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILCLLES 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|299755703|ref|XP_002912133.1| 40S ribosomal protein S28 [Coprinopsis cinerea okayama7#130]
gi|298411344|gb|EFI28639.1| 40S ribosomal protein S28 [Coprinopsis cinerea okayama7#130]
Length = 68
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTTRTIIRNVKGPVRENDILALLESEREARRLR 68
>gi|195656443|gb|ACG47689.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQVRV F+DD R I RNV GPVR GDILTLLESER
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVRVXFLDDQNRLIMRNVXGPVREGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|3947725|emb|CAA10104.1| ribosomal protein S28 [Prunus persica]
Length = 65
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F+ D R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFLGDQNRFIMRNVKGPVREGDILTLLESEREARRLR 65
>gi|296805559|ref|XP_002843604.1| 40S ribosomal protein S28 [Arthroderma otae CBS 113480]
gi|315046778|ref|XP_003172764.1| 40S ribosomal protein S28 [Arthroderma gypseum CBS 118893]
gi|238844906|gb|EEQ34568.1| ribosomal protein S28e [Arthroderma otae CBS 113480]
gi|311343150|gb|EFR02353.1| 30S ribosomal protein S28e [Arthroderma gypseum CBS 118893]
gi|326471385|gb|EGD95394.1| 30S ribosomal protein S28e [Trichophyton tonsurans CBS 112818]
gi|326484464|gb|EGE08474.1| 30S ribosomal protein S28e [Trichophyton equinum CBS 127.97]
Length = 68
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 1 MDTGG--PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLES 58
MD G K A V V+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVRV DIL LLES
Sbjct: 1 MDAGKVPAKYAKVTSVLGRTGSRGGVTQVRVEFMDDSNRSIIRNVKGPVRVDDILCLLES 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|332231810|ref|XP_003265088.1| PREDICTED: 40S ribosomal protein S28-like [Nomascus leucogenys]
Length = 91
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 32 KLARVTKVLGRTGSQGQRTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 91
>gi|320580287|gb|EFW94510.1| Protein component of the small (40S) ribosomal subunit [Ogataea
parapolymorpha DL-1]
gi|385301268|gb|EIF45471.1| 40s ribosomal protein s28 [Dekkera bruxellensis AWRI1499]
Length = 67
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F+DDT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDTSRTIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|327305655|ref|XP_003237519.1| 40S ribosomal protein S28 [Trichophyton rubrum CBS 118892]
gi|326460517|gb|EGD85970.1| 30S ribosomal protein S28e [Trichophyton rubrum CBS 118892]
Length = 68
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 1 MDTGG--PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLES 58
MD G K A V V+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVRV DIL LLES
Sbjct: 1 MDAGKVPAKYAKVTAVLGRTGSRGGVTQVRVEFMDDSNRSIIRNVKGPVRVDDILCLLES 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|426201531|gb|EKV51454.1| hypothetical protein AGABI2DRAFT_133134 [Agaricus bisporus var.
bisporus H97]
Length = 69
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 10 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTSRTIIRNVKGPVREEDILALLESEREARRLR 69
>gi|61369337|gb|AAX43319.1| ribosomal protein S28 [synthetic construct]
Length = 70
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTL ESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLWESEREARRLR 69
>gi|355703082|gb|EHH29573.1| hypothetical protein EGK_10040 [Macaca mulatta]
Length = 69
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARR R
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRWR 69
>gi|24651257|ref|NP_651764.1| ribosomal protein S28a [Drosophila melanogaster]
gi|7301884|gb|AAF56992.1| ribosomal protein S28a [Drosophila melanogaster]
gi|262263537|gb|ACX61612.2| RT02924p [Drosophila melanogaster]
Length = 64
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 54/61 (88%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V++++GRTGS+GQ TQVRV+F+ D RQI RNVKGPVRVGDIL+LLE+EREARRL
Sbjct: 4 PQYARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLETEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|448079144|ref|XP_004194323.1| Piso0_004810 [Millerozyma farinosa CBS 7064]
gi|359375745|emb|CCE86327.1| Piso0_004810 [Millerozyma farinosa CBS 7064]
Length = 67
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR D+L L+ESEREARRLR
Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIVRNVKGPVRENDVLCLMESEREARRLR 67
>gi|291225043|ref|XP_002732508.1| PREDICTED: ribosomal protein S28-like [Saccoglossus kowalevskii]
Length = 65
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 6 KLAKVTKVLGRTGSQGQCTQVRVEFLDDSNRSIIRNVKGPVREGDVLTLLESEREARRLR 65
>gi|195609606|gb|ACG26633.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A V+KV+GRTGSRGQVTQV+V+F+DD R I RNV GPVR GDILTLLESER
Sbjct: 1 MDTQ-VKLAVVVKVMGRTGSRGQVTQVKVKFLDDQNRLIMRNVXGPVREGDILTLLESER 59
Query: 61 EARRLR 66
EARRLR
Sbjct: 60 EARRLR 65
>gi|392353301|ref|XP_003751455.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
Length = 69
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR D+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVRESDVLTLLESEREARRLR 69
>gi|410924584|ref|XP_003975761.1| PREDICTED: 40S ribosomal protein S28-like [Takifugu rubripes]
gi|47216403|emb|CAG01954.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV FMDD+ R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVDFMDDSSRSIIRNVKGPVREGDVLTLLESEREARRLR 69
>gi|332240654|ref|XP_003269501.1| PREDICTED: 40S ribosomal protein S28-like isoform 1 [Nomascus
leucogenys]
gi|441647393|ref|XP_004090806.1| PREDICTED: 40S ribosomal protein S28-like isoform 2 [Nomascus
leucogenys]
Length = 69
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREAR LR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARSLR 69
>gi|448079371|ref|XP_004194376.1| Piso0_004865 [Millerozyma farinosa CBS 7064]
gi|448083932|ref|XP_004195477.1| Piso0_004865 [Millerozyma farinosa CBS 7064]
gi|359375798|emb|CCE86380.1| Piso0_004865 [Millerozyma farinosa CBS 7064]
gi|359376899|emb|CCE85282.1| Piso0_004865 [Millerozyma farinosa CBS 7064]
Length = 67
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F+DD+ R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDSSRSIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|326428343|gb|EGD73913.1| ribosomal protein S28 [Salpingoeca sp. ATCC 50818]
Length = 66
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 52/66 (78%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MD K A V KV+GRTGS+GQ QVRV+F+DDT R I RNVKGPVR GDIL LLESER
Sbjct: 1 MDEQPEKLARVTKVLGRTGSQGQAIQVRVEFLDDTSRSIIRNVKGPVRAGDILVLLESER 60
Query: 61 EARRLR 66
EARR+R
Sbjct: 61 EARRMR 66
>gi|154275822|ref|XP_001538756.1| 40S ribosomal protein S28 [Ajellomyces capsulatus NAm1]
gi|150413829|gb|EDN09194.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|240278384|gb|EER41890.1| hypothetical protein HCDG_03349 [Ajellomyces capsulatus H143]
gi|325090699|gb|EGC44009.1| predicted protein [Ajellomyces capsulatus H88]
Length = 69
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MD G K A V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLE
Sbjct: 1 MDASGKVPIKFAKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLE 60
Query: 58 SEREARRLR 66
SEREARRLR
Sbjct: 61 SEREARRLR 69
>gi|50311927|ref|XP_455995.1| 40S ribosomal protein S28 [Kluyveromyces lactis NRRL Y-1140]
gi|464714|sp|P33285.1|RS28_KLULA RecName: Full=40S ribosomal protein S28; AltName: Full=S33
gi|395170|emb|CAA49296.1| ribosomal protein S33 [Kluyveromyces lactis]
gi|49645131|emb|CAG98703.1| KLLA0F20383p [Kluyveromyces lactis]
Length = 67
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR GDIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTTRTIVRNVKGPVREGDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|158187734|gb|ABW23156.1| ribosomal protein rps28 [Arenicola marina]
Length = 68
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 9 KLARVTKVLGRTGSQGQCTQVRVEFLDDSNRLIIRNVKGPVREGDILTLLESEREARRLR 68
>gi|440903409|gb|ELR54073.1| hypothetical protein M91_02959 [Bos grunniens mutus]
Length = 69
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGP R GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPEREGDVLTLLESEREARRLR 69
>gi|401885232|gb|EJT49355.1| hypothetical protein A1Q1_01557 [Trichosporon asahii var. asahii
CBS 2479]
Length = 228
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 12 IKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
I V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 174 IHVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVRVNDILALLESEREARRLR 228
>gi|1313916|dbj|BAA12712.1| ribosomal protein S33 homolog [Schizosaccharomyces pombe]
Length = 61
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 4 AKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVREDDILVLLESEREARRLR 61
>gi|225682189|gb|EEH20473.1| hypothetical protein PABG_07829 [Paracoccidioides brasiliensis
Pb03]
Length = 69
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MD G K A V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLE
Sbjct: 1 MDISGKVPIKFAKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLE 60
Query: 58 SEREARRLR 66
SEREARRLR
Sbjct: 61 SEREARRLR 69
>gi|254566481|ref|XP_002490351.1| 40S ribosomal protein S28 [Komagataella pastoris GS115]
gi|254570781|ref|XP_002492500.1| 40S ribosomal protein S28 [Komagataella pastoris GS115]
gi|238030147|emb|CAY68070.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|238032298|emb|CAY70321.1| hypothetical protein PAS_chr3_1174 [Komagataella pastoris GS115]
gi|328350746|emb|CCA37146.1| 40S ribosomal protein S28 [Komagataella pastoris CBS 7435]
Length = 67
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F+DD+ R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDSSRTIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|448083708|ref|XP_004195423.1| Piso0_004810 [Millerozyma farinosa CBS 7064]
gi|359376845|emb|CCE85228.1| Piso0_004810 [Millerozyma farinosa CBS 7064]
Length = 67
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVR D+L L+ESEREARRLR
Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFMDDSSRSIVRNVKGPVRENDVLCLMESEREARRLR 67
>gi|261188297|ref|XP_002620564.1| 40S ribosomal protein S28 [Ajellomyces dermatitidis SLH14081]
gi|239593243|gb|EEQ75824.1| 30S ribosomal protein S28e [Ajellomyces dermatitidis SLH14081]
gi|239614919|gb|EEQ91906.1| 30S ribosomal protein S28e [Ajellomyces dermatitidis ER-3]
gi|327352358|gb|EGE81215.1| 30S ribosomal protein S28e [Ajellomyces dermatitidis ATCC 18188]
Length = 69
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MD G K A V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLE
Sbjct: 1 MDATGKVPIKFAKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLE 60
Query: 58 SEREARRLR 66
SEREARRLR
Sbjct: 61 SEREARRLR 69
>gi|45201357|ref|NP_986927.1| 40S ribosomal protein S28 [Ashbya gossypii ATCC 10895]
gi|255712769|ref|XP_002552667.1| 40S ribosomal protein S28 [Lachancea thermotolerans]
gi|363750474|ref|XP_003645454.1| hypothetical protein Ecym_3133 [Eremothecium cymbalariae
DBVPG#7215]
gi|444321719|ref|XP_004181515.1| hypothetical protein TBLA_0G00470 [Tetrapisispora blattae CBS
6284]
gi|51316720|sp|Q74ZD8.1|RS28_ASHGO RecName: Full=40S ribosomal protein S28
gi|44986291|gb|AAS54751.1| AGR261Wp [Ashbya gossypii ATCC 10895]
gi|238934046|emb|CAR22229.1| KLTH0C10296p [Lachancea thermotolerans CBS 6340]
gi|356889088|gb|AET38637.1| Hypothetical protein Ecym_3133 [Eremothecium cymbalariae
DBVPG#7215]
gi|374110177|gb|AEY99082.1| FAGR261Wp [Ashbya gossypii FDAG1]
gi|387514560|emb|CCH61996.1| hypothetical protein TBLA_0G00470 [Tetrapisispora blattae CBS
6284]
Length = 67
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F+DDT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|194905804|ref|XP_001981260.1| GG11974 [Drosophila erecta]
gi|190655898|gb|EDV53130.1| GG11974 [Drosophila erecta]
Length = 64
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 52/61 (85%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+K++GRT SRGQ TQVRVQF+ D RQI RNVKGPVR GDIL+LLESEREARR+
Sbjct: 4 PQYARVVKILGRTRSRGQCTQVRVQFLGDQNRQIIRNVKGPVREGDILSLLESEREARRI 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|149286900|gb|ABR23349.1| 40S ribosomal protein S28 [Ornithodoros parkeri]
Length = 64
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+F+D++ R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 5 KLARVTKVLGRTGSQGQCTQVRVEFLDESNRSIIRNVKGPVREGDILTLLESEREARRLR 64
>gi|109074655|ref|XP_001108858.1| PREDICTED: 40S ribosomal protein S28-like [Macaca mulatta]
Length = 69
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMD T R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDYTSRSIIRNVKGPVREGDVLTLLESEREARRLR 69
>gi|146422413|ref|XP_001487145.1| 40S ribosomal protein S28 [Meyerozyma guilliermondii ATCC 6260]
gi|146388266|gb|EDK36424.1| 40S ribosomal protein S28 [Meyerozyma guilliermondii ATCC 6260]
gi|344234803|gb|EGV66671.1| hypothetical protein CANTEDRAFT_112407 [Candida tenuis ATCC
10573]
gi|344234804|gb|EGV66672.1| 40S ribosomal protein S28 [Candida tenuis ATCC 10573]
Length = 67
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|37951021|emb|CAD86892.1| CG15527 [Drosophila simulans]
Length = 64
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 53/61 (86%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A V+K+IGRTGS+GQ TQV+V+F+ RQI RNVKGPVRVGDIL+LLE+EREARRL
Sbjct: 4 PQYARVVKIIGRTGSQGQCTQVQVEFLGHQSRQIIRNVKGPVRVGDILSLLETEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|401624483|gb|EJS42539.1| rps28bp [Saccharomyces arboricola H-6]
Length = 67
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+FM+DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFMEDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|464715|sp|P33286.1|RS28_KLUMA RecName: Full=40S ribosomal protein S28; AltName: Full=S33
gi|395172|emb|CAA49297.1| ribosomal protein S33 [Kluyveromyces marxianus]
Length = 67
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR GDIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTTRTIVRNVKGPVREGDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|428179822|gb|EKX48691.1| small subunit ribosomal protein S28e, cytoplasmic [Guillardia
theta CCMP2712]
Length = 68
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 50/61 (81%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
PK A V V+GRTGSRG VTQVRV+F+DD R I RNVKGPVR GDIL LLESEREARRL
Sbjct: 8 PKLARVKNVLGRTGSRGTVTQVRVEFLDDVNRSIIRNVKGPVREGDILVLLESEREARRL 67
Query: 66 R 66
R
Sbjct: 68 R 68
>gi|109102985|ref|XP_001115206.1| PREDICTED: 40S ribosomal protein S28-like [Macaca mulatta]
Length = 69
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FM+DT I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMEDTSHSIIRNVKGPVREGDMLTLLESEREARRLR 69
>gi|156839428|ref|XP_001643405.1| hypothetical protein Kpol_1042p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156844477|ref|XP_001645301.1| hypothetical protein Kpol_1037p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156114014|gb|EDO15547.1| hypothetical protein Kpol_1042p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156115961|gb|EDO17443.1| hypothetical protein Kpol_1037p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 67
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F+DDT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDTTRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|403216460|emb|CCK70957.1| hypothetical protein KNAG_0F02950 [Kazachstania naganishii CBS
8797]
Length = 67
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|367016993|ref|XP_003682995.1| 40S ribosomal protein S28 [Torulaspora delbrueckii]
gi|359750658|emb|CCE93784.1| hypothetical protein TDEL_0G04170 [Torulaspora delbrueckii]
Length = 67
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F+DDT R I RNVKGPVR D+L L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDTSRTIVRNVKGPVRENDVLVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|401623569|gb|EJS41664.1| rps28ap [Saccharomyces arboricola H-6]
Length = 67
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD P A VIKV+GRTGSRG VTQVRV+FM+DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDNKTPVTLAKVIKVLGRTGSRGGVTQVRVEFMEDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|440136442|gb|AGB85060.1| ribosomal protein S28e, partial [Auxenochlorella protothecoides]
Length = 181
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESERE 61
K A V+KVIGRTGSRGQVTQVRV+F++D +RQI RNVKGPVR GD+LTLLESERE
Sbjct: 85 KLAIVVKVIGRTGSRGQVTQVRVKFLNDQERQIMRNVKGPVREGDVLTLLESERE 139
>gi|444728404|gb|ELW68862.1| 40S ribosomal protein S28 [Tupaia chinensis]
Length = 69
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ QVRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQRMQVRVEFMDDTHRSIIRNVKGPVRKGDVLTLLESEREARRLR 69
>gi|255954339|ref|XP_002567922.1| Pc21g08830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589633|emb|CAP95780.1| Pc21g08830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425772391|gb|EKV10795.1| Ribosomal protein S28e [Penicillium digitatum Pd1]
gi|425773312|gb|EKV11671.1| Ribosomal protein S28e [Penicillium digitatum PHI26]
Length = 68
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVRVDDILCLLESEREARRLR 68
>gi|367005164|ref|XP_003687314.1| 40S ribosomal protein S28 [Tetrapisispora phaffii CBS 4417]
gi|357525618|emb|CCE64880.1| hypothetical protein TPHA_0J00570 [Tetrapisispora phaffii CBS
4417]
Length = 67
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F+DD+ R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDSSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|389751275|gb|EIM92348.1| ribosomal protein S28e [Stereum hirsutum FP-91666 SS1]
Length = 68
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A VIKV+GRTGSRG VTQVRV+F+DDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLARVIKVLGRTGSRGGVTQVRVEFLDDTTRTIIRNVKGPVREEDILALLESEREARRLR 68
>gi|395334183|gb|EJF66559.1| ribosomal protein S28e [Dichomitus squalens LYAD-421 SS1]
Length = 68
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K ATV KV+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLATVTKVLGRTGSRGGVTQVRVEFMDDPTRTIIRNVKGPVREKDILALLESEREARRLR 68
>gi|293354287|ref|XP_002728474.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
gi|392333678|ref|XP_003752967.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
Length = 69
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RN KGPV GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNFKGPVPEGDVLTLLESEREARRLR 69
>gi|409051455|gb|EKM60931.1| hypothetical protein PHACADRAFT_247160 [Phanerochaete carnosa
HHB-10118-sp]
Length = 69
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGSRG VTQVRV+F+DD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 10 KLAAVTKVLGRTGSRGGVTQVRVEFLDDPSRSIIRNVKGPVRTNDILALLESEREARRLR 69
>gi|354548480|emb|CCE45216.1| hypothetical protein CPAR2_702290 [Candida parapsilosis]
Length = 67
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F++D+ R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDSSRTIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|307197260|gb|EFN78565.1| 40S ribosomal protein S28 [Harpegnathos saltator]
Length = 66
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 53/59 (89%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+A V+KV+GRTGS+GQ TQV+V+F+++ RQ+ RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 RARVVKVLGRTGSQGQCTQVKVEFLNEQNRQLIRNVKGPVREGDILTLLESEREARRLR 66
>gi|6323294|ref|NP_013366.1| ribosomal 40S subunit protein S28B [Saccharomyces cerevisiae
S288c]
gi|365990443|ref|XP_003672051.1| ribosomal protein S28 [Naumovozyma dairenensis CBS 421]
gi|365991769|ref|XP_003672713.1| ribosomal protein S28 [Naumovozyma dairenensis CBS 421]
gi|366992848|ref|XP_003676189.1| hypothetical protein NCAS_0D02470 [Naumovozyma castellii CBS
4309]
gi|366994204|ref|XP_003676866.1| hypothetical protein NCAS_0F00260 [Naumovozyma castellii CBS
4309]
gi|410075005|ref|XP_003955085.1| hypothetical protein KAFR_0A05150 [Kazachstania africana CBS
2517]
gi|410081696|ref|XP_003958427.1| hypothetical protein KAFR_0G02600 [Kazachstania africana CBS
2517]
gi|85695430|sp|P0C0X0.1|RS28B_YEAST RecName: Full=40S ribosomal protein S28-B; AltName: Full=S33;
AltName: Full=YS27
gi|577176|gb|AAB67375.1| Rps33bp: 40S ribosomal protein YL27 [Saccharomyces cerevisiae]
gi|151941098|gb|EDN59478.1| ribosomal protein S28B [Saccharomyces cerevisiae YJM789]
gi|190405324|gb|EDV08591.1| ribosomal protein S28B [Saccharomyces cerevisiae RM11-1a]
gi|256271754|gb|EEU06791.1| Rps28bp [Saccharomyces cerevisiae JAY291]
gi|259148247|emb|CAY81494.1| Rps28bp [Saccharomyces cerevisiae EC1118]
gi|285813681|tpg|DAA09577.1| TPA: ribosomal 40S subunit protein S28B [Saccharomyces cerevisiae
S288c]
gi|342302055|emb|CCC69828.1| hypothetical protein NCAS_0D02470 [Naumovozyma castellii CBS
4309]
gi|342302734|emb|CCC70510.1| hypothetical protein NCAS_0F00260 [Naumovozyma castellii CBS
4309]
gi|343770825|emb|CCD26808.1| hypothetical protein NDAI_0I02400 [Naumovozyma dairenensis CBS
421]
gi|343771489|emb|CCD27470.1| hypothetical protein NDAI_0K02790 [Naumovozyma dairenensis CBS
421]
gi|349579971|dbj|GAA25132.1| K7_Rps28bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|372461667|emb|CCF55950.1| hypothetical protein KAFR_0A05150 [Kazachstania africana CBS
2517]
gi|372465015|emb|CCF59292.1| hypothetical protein KAFR_0G02600 [Kazachstania africana CBS
2517]
gi|392297771|gb|EIW08870.1| Rps28bp [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401838115|gb|EJT41892.1| RPS28B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 67
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|378725719|gb|EHY52178.1| 40S ribosomal protein S28 [Exophiala dermatitidis NIH/UT8656]
Length = 68
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 1 MDTGGP--KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLES 58
MD G K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLES
Sbjct: 1 MDAGKTPVKLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLES 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|302695799|ref|XP_003037578.1| 40S ribosomal protein S28 [Schizophyllum commune H4-8]
gi|300111275|gb|EFJ02676.1| hypothetical protein SCHCODRAFT_46246, partial [Schizophyllum
commune H4-8]
Length = 84
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 7 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIVRNVKGPVREEDILALLESEREAR 63
>gi|170060838|ref|XP_001865978.1| ribosomal protein S28 [Culex quinquefasciatus]
gi|170060842|ref|XP_001865980.1| 40S ribosomal protein S28 [Culex quinquefasciatus]
gi|167879215|gb|EDS42598.1| ribosomal protein S28 [Culex quinquefasciatus]
gi|167879217|gb|EDS42600.1| 40S ribosomal protein S28 [Culex quinquefasciatus]
Length = 65
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFISEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|328790000|ref|XP_003251355.1| PREDICTED: 40S ribosomal protein S28-like [Apis mellifera]
gi|340728247|ref|XP_003402439.1| PREDICTED: 40S ribosomal protein S28-like [Bombus terrestris]
gi|350403087|ref|XP_003486696.1| PREDICTED: 40S ribosomal protein S28-like isoform 1 [Bombus
impatiens]
gi|350403090|ref|XP_003486697.1| PREDICTED: 40S ribosomal protein S28-like isoform 2 [Bombus
impatiens]
gi|380011743|ref|XP_003689956.1| PREDICTED: 40S ribosomal protein S28-like [Apis florea]
gi|383861368|ref|XP_003706158.1| PREDICTED: 40S ribosomal protein S28-like [Megachile rotundata]
gi|307184773|gb|EFN71087.1| 40S ribosomal protein S28 [Camponotus floridanus]
gi|332031083|gb|EGI70669.1| 40S ribosomal protein S28 [Acromyrmex echinatior]
Length = 65
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 53/59 (89%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+A V+KV+GRTGS+GQ TQV+V+F+++ RQ+ RNVKGPVR GDILTLLESEREARRLR
Sbjct: 7 RARVVKVLGRTGSQGQCTQVKVEFLNEQNRQLIRNVKGPVREGDILTLLESEREARRLR 65
>gi|156337998|ref|XP_001619938.1| hypothetical protein NEMVEDRAFT_v1g149719 [Nematostella
vectensis]
gi|156204045|gb|EDO27838.1| predicted protein [Nematostella vectensis]
Length = 56
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 50/56 (89%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V K++GRTGS+GQ TQVRV+F+DDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 1 VTKILGRTGSQGQCTQVRVEFIDDTNRSIIRNVKGPVREGDMLTLLESEREARRLR 56
>gi|71004506|ref|XP_756919.1| hypothetical protein UM00772.1 [Ustilago maydis 521]
gi|46095911|gb|EAK81144.1| hypothetical protein UM00772.1 [Ustilago maydis 521]
Length = 314
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
M G + V KV+GRTGSRG + QVRV+FMD+T+R I RNVKGPV+ DIL LLESER
Sbjct: 249 MRLGRARHHNVTKVLGRTGSRGGIIQVRVEFMDETRRSIIRNVKGPVKADDILALLESER 308
Query: 61 EARRLR 66
EARRLR
Sbjct: 309 EARRLR 314
>gi|342356439|gb|AEL28878.1| ribosomal protein S28 [Heliconius melpomene cythera]
Length = 65
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 52/58 (89%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ +T RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVMKVLGRTGSQGQCTQVKVEFLGETSRQIIRNVKGPVRDGDILTLLESEREARRLR 65
>gi|50421107|ref|XP_459098.1| 40S ribosomal protein S28 [Debaryomyces hansenii CBS767]
gi|50425477|ref|XP_461332.1| 40S ribosomal protein S28 [Debaryomyces hansenii CBS767]
gi|448536026|ref|XP_003871053.1| Rps28b ribosomal protein S28B [Candida orthopsilosis Co 90-125]
gi|49654765|emb|CAG87266.1| DEHA2D14256p [Debaryomyces hansenii CBS767]
gi|49657001|emb|CAG89737.1| DEHA2F22748p [Debaryomyces hansenii CBS767]
gi|380355409|emb|CCG24928.1| Rps28b ribosomal protein S28B [Candida orthopsilosis]
Length = 67
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A VIKV+GRTGSRG VTQVRV+F++D R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDASRTIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|145247995|ref|XP_001396246.1| 40S ribosomal protein S28 [Aspergillus niger CBS 513.88]
gi|134080993|emb|CAK41507.1| unnamed protein product [Aspergillus niger]
gi|358373073|dbj|GAA89673.1| ribosomal protein S28e [Aspergillus kawachii IFO 4308]
Length = 68
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLESEREARRLR 68
>gi|115395502|ref|XP_001213514.1| 40S ribosomal protein S28 [Aspergillus terreus NIH2624]
gi|114193083|gb|EAU34783.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 68
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLESEREARRLR 68
>gi|15232831|ref|NP_187620.1| 40S ribosomal protein S28-1 [Arabidopsis thaliana]
gi|15237548|ref|NP_196005.1| 40S ribosomal protein S28-1 [Arabidopsis thaliana]
gi|297797427|ref|XP_002866598.1| hypothetical protein ARALYDRAFT_919718 [Arabidopsis lyrata subsp.
lyrata]
gi|297810469|ref|XP_002873118.1| hypothetical protein ARALYDRAFT_325035 [Arabidopsis lyrata subsp.
lyrata]
gi|297833792|ref|XP_002884778.1| hypothetical protein ARALYDRAFT_478337 [Arabidopsis lyrata subsp.
lyrata]
gi|297838067|ref|XP_002886915.1| hypothetical protein ARALYDRAFT_894090 [Arabidopsis lyrata subsp.
lyrata]
gi|75313795|sp|Q9SR73.1|RS281_ARATH RecName: Full=40S ribosomal protein S28-1
gi|6143868|gb|AAF04415.1|AC010927_8 putative ribosomal protein S28 [Arabidopsis thaliana]
gi|7406395|emb|CAB85505.1| RIBOSOMAL PROTEIN S28-like [Arabidopsis thaliana]
gi|9758014|dbj|BAB08611.1| ribosomal protein S28 [Arabidopsis thaliana]
gi|22136042|gb|AAM91603.1| ribosomal protein S28-like protein [Arabidopsis thaliana]
gi|23197756|gb|AAN15405.1| ribosomal protein S28-like protein [Arabidopsis thaliana]
gi|38566518|gb|AAR24149.1| At3g10090 [Arabidopsis thaliana]
gi|40823561|gb|AAR92289.1| At3g10090 [Arabidopsis thaliana]
gi|106879139|gb|ABF82599.1| At5g03850 [Arabidopsis thaliana]
gi|297312433|gb|EFH42857.1| hypothetical protein ARALYDRAFT_919718 [Arabidopsis lyrata subsp.
lyrata]
gi|297318955|gb|EFH49377.1| hypothetical protein ARALYDRAFT_325035 [Arabidopsis lyrata subsp.
lyrata]
gi|297330618|gb|EFH61037.1| hypothetical protein ARALYDRAFT_478337 [Arabidopsis lyrata subsp.
lyrata]
gi|297332756|gb|EFH63174.1| hypothetical protein ARALYDRAFT_894090 [Arabidopsis lyrata subsp.
lyrata]
gi|332003279|gb|AED90662.1| 40S ribosomal protein S28-1 [Arabidopsis thaliana]
gi|332641337|gb|AEE74858.1| 40S ribosomal protein S28-1 [Arabidopsis thaliana]
Length = 64
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F D + R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFTD-SDRYIMRNVKGPVREGDILTLLESEREARRLR 64
>gi|383850448|ref|XP_003700807.1| PREDICTED: 40S ribosomal protein S28-like [Megachile rotundata]
Length = 113
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 56 ARVIKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDLLTLLESEREARRLR 113
>gi|256075474|ref|XP_002574044.1| 40S ribosomal protein S28 [Schistosoma mansoni]
Length = 68
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V V+GRTGS+GQ TQVRV+F+DDT R I RNVKGP+R GDILTLLE+EREARRLR
Sbjct: 9 KLARVKAVVGRTGSQGQCTQVRVEFLDDTNRSIIRNVKGPIREGDILTLLETEREARRLR 68
>gi|406694758|gb|EKC98080.1| hypothetical protein A1Q2_07626 [Trichosporon asahii var. asahii
CBS 8904]
Length = 214
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 48/54 (88%)
Query: 13 KVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 161 QVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVRVNDILALLESEREARRLR 214
>gi|298708862|emb|CBJ30820.1| 40S ribosomal protein S28 [Ectocarpus siliculosus]
Length = 66
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 51/66 (77%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MD G K A V KV+GRTG+ G VTQVRV+F+DD R I RNVKGPVR GDIL LLE ER
Sbjct: 1 MDNQGIKLAKVNKVLGRTGNTGNVTQVRVEFLDDPTRSIIRNVKGPVREGDILCLLEWER 60
Query: 61 EARRLR 66
EARRLR
Sbjct: 61 EARRLR 66
>gi|294934074|ref|XP_002780966.1| 40S ribosomal protein S28, putative [Perkinsus marinus ATCC
50983]
gi|294944251|ref|XP_002784162.1| 40S ribosomal protein S28, putative [Perkinsus marinus ATCC
50983]
gi|239891137|gb|EER12761.1| 40S ribosomal protein S28, putative [Perkinsus marinus ATCC
50983]
gi|239897196|gb|EER15958.1| 40S ribosomal protein S28, putative [Perkinsus marinus ATCC
50983]
Length = 71
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 55/71 (77%), Gaps = 5/71 (7%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK-----RQITRNVKGPVRVGDILTL 55
MD+ PK A V KVIGRTGSRG VTQVRVQFM +T R + RNVKGPVR GDIL+L
Sbjct: 1 MDSNQPKLAKVEKVIGRTGSRGGVTQVRVQFMVETAPELAGRSLVRNVKGPVRQGDILSL 60
Query: 56 LESEREARRLR 66
LE+EREARRLR
Sbjct: 61 LETEREARRLR 71
>gi|346325733|gb|EGX95330.1| 40S ribosomal protein S28 [Cordyceps militaris CM01]
Length = 68
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V KVIGRTGSRG VTQVRV+FMDD+ R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTKVIGRTGSRGGVTQVRVEFMDDSTRSIIRNVKGPVRENDILCLLESEREARRLR 68
>gi|112982910|ref|NP_001037680.1| 40S ribosomal protein S28 [Bombyx mori]
gi|51316656|sp|Q6PS50.1|RS28_BOMMO RecName: Full=40S ribosomal protein S28
gi|51316899|sp|Q962Q2.1|RS28_SPOFR RecName: Full=40S ribosomal protein S28
gi|52000788|sp|Q6EV21.1|RS28_PAPDA RecName: Full=40S ribosomal protein S28
gi|15213842|gb|AAK92196.1|AF400224_1 ribosomal protein S28 [Spodoptera frugiperda]
gi|46406036|gb|AAS93683.1| ribosomal protein S28 [Bombyx mori]
gi|49532868|dbj|BAD26669.1| Ribosomal protein S28 [Plutella xylostella]
gi|50284396|emb|CAH04129.1| ribosomal protein S28e [Papilio dardanus]
gi|54609341|gb|AAV34886.1| ribosomal protein S28 [Bombyx mori]
gi|268306496|gb|ACY95369.1| ribosomal protein S28 [Manduca sexta]
gi|315115449|gb|ADT80697.1| ribosomal protein S28 [Euphydryas aurinia]
gi|357629147|gb|EHJ78114.1| 40S ribosomal protein S28 [Danaus plexippus]
gi|389608369|dbj|BAM17794.1| ribosomal protein S28b [Papilio xuthus]
gi|389610893|dbj|BAM19057.1| ribosomal protein S28b [Papilio polytes]
Length = 65
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 52/58 (89%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ +T RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLESEREARRLR 65
>gi|119482684|ref|XP_001261370.1| 40S ribosomal protein S28 [Neosartorya fischeri NRRL 181]
gi|121711345|ref|XP_001273288.1| 40S ribosomal protein S28 [Aspergillus clavatus NRRL 1]
gi|119401439|gb|EAW11862.1| Ribosomal protein S28e [Aspergillus clavatus NRRL 1]
gi|119409525|gb|EAW19473.1| Ribosomal protein S28e [Neosartorya fischeri NRRL 181]
Length = 68
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLLESEREARRLR 68
>gi|12239511|gb|AAG49498.1| ribosomal protein S28 [Cricetulus griseus]
Length = 66
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 49/57 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLLESEREAR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREAR 66
>gi|6324741|ref|NP_014810.1| ribosomal 40S subunit protein S28A [Saccharomyces cerevisiae
S288c]
gi|85681892|sp|Q3E7X9.1|RS28A_YEAST RecName: Full=40S ribosomal protein S28-A; AltName: Full=S33;
AltName: Full=YS27
gi|313103687|pdb|3IZB|Y Chain Y, Localization Of The Small Subunit Ribosomal Proteins
Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113465|pdb|3O2Z|R Chain R, Yeast 80s Ribosome. This Entry Consists Of The 40s
Subunit Of The First 80s In The Asymmetric Unit.
gi|315113493|pdb|3O30|R Chain R, Yeast 80s Ribosome. This Entry Consists Of The 40s
Subunit Of The Second 80s In The Asymmetric Unit.
gi|364506124|pdb|3U5C|CC Chain c, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506162|pdb|3U5G|CC Chain c, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|4415|emb|CAA24958.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1293728|gb|AAB47414.1| Rps33p [Saccharomyces cerevisiae]
gi|1420411|emb|CAA99373.1| RPS33A [Saccharomyces cerevisiae]
gi|51012943|gb|AAT92765.1| YLR264W [Saccharomyces cerevisiae]
gi|151945786|gb|EDN64027.1| ribosomal protein S28A [Saccharomyces cerevisiae YJM789]
gi|190407486|gb|EDV10753.1| ribosomal protein S28A [Saccharomyces cerevisiae RM11-1a]
gi|256272790|gb|EEU07761.1| Rps28ap [Saccharomyces cerevisiae JAY291]
gi|259149653|emb|CAY86457.1| Rps28ap [Saccharomyces cerevisiae EC1118]
gi|285815048|tpg|DAA10941.1| TPA: ribosomal 40S subunit protein S28A [Saccharomyces cerevisiae
S288c]
gi|349581325|dbj|GAA26483.1| K7_Rps28ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296497|gb|EIW07599.1| Rps28ap [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401841375|gb|EJT43775.1| RPS28A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 67
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDNKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|392571647|gb|EIW64819.1| hypothetical protein TRAVEDRAFT_109668, partial [Trametes
versicolor FP-101664 SS1]
Length = 116
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K ATVIKV+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREAR
Sbjct: 8 KLATVIKVLGRTGSRGGVTQVRVEFMDDPTRSIIRNVKGPVREKDILALLESEREAR 64
>gi|390604780|gb|EIN14171.1| 40S ribosomal protein S28, partial [Punctularia strigosozonata
HHB-11173 SS5]
Length = 65
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 49/57 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K ATVIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 9 KLATVIKVLGRTGSRGGVTQVRVEFMDDTSRTIIRNVKGPVRERDILALLESEREAR 65
>gi|50547987|ref|XP_501463.1| 40S ribosomal protein S28 [Yarrowia lipolytica]
gi|49647330|emb|CAG81764.1| YALI0C05148p [Yarrowia lipolytica CLIB122]
Length = 69
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRG VTQVRV+F+DD R I RNVKGPVR DIL L+ESEREARRLR
Sbjct: 10 KLAKVVKVLGRTGSRGGVTQVRVEFIDDESRSIVRNVKGPVRENDILCLMESEREARRLR 69
>gi|146422171|ref|XP_001487027.1| 40S ribosomal protein S28-A [Meyerozyma guilliermondii ATCC 6260]
gi|146388148|gb|EDK36306.1| 40S ribosomal protein S28-A [Meyerozyma guilliermondii ATCC 6260]
Length = 72
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 2 DTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
DT P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR DIL L+ESER
Sbjct: 7 DTKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILCLMESER 66
Query: 61 EARRLR 66
EARRLR
Sbjct: 67 EARRLR 72
>gi|157114485|ref|XP_001652294.1| ribosomal protein S28, putative [Aedes aegypti]
gi|94468900|gb|ABF18299.1| ribosomal protein S28E [Aedes aegypti]
gi|108877284|gb|EAT41509.1| AAEL006860-PA [Aedes aegypti]
Length = 65
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVVKVLGRTGSQGQCTQVKVEFISEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|226475200|emb|CAX71894.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478270|emb|CAX78400.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478272|emb|CAX78401.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478274|emb|CAX78402.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478276|emb|CAX78403.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478278|emb|CAX78404.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478280|emb|CAX78405.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478282|emb|CAX78406.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478284|emb|CAX78407.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478286|emb|CAX78408.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478288|emb|CAX78409.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478290|emb|CAX78410.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478294|emb|CAX78412.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478296|emb|CAX78413.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478298|emb|CAX78414.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478300|emb|CAX78415.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478302|emb|CAX78416.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478304|emb|CAX78417.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478306|emb|CAX78418.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478308|emb|CAX78419.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478310|emb|CAX78420.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478312|emb|CAX78421.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478314|emb|CAX78422.1| 40S ribosomal protein S28 [Schistosoma japonicum]
gi|226478316|emb|CAX78423.1| 40S ribosomal protein S28 [Schistosoma japonicum]
Length = 68
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V V+GRTGS+GQ TQVRV+F+DDT R I RNVKGP+R GDILTLLE+EREARRLR
Sbjct: 9 KLARVKAVVGRTGSQGQCTQVRVEFLDDTNRTIIRNVKGPIREGDILTLLETEREARRLR 68
>gi|157361533|gb|ABV44724.1| 40S ribosomal protein S28-like protein [Phlebotomus papatasi]
Length = 65
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFIGEVNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|160550193|gb|ABX44801.1| putative 40S ribosomal protein RPS28 [Flustra foliacea]
Length = 70
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 53/62 (85%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
G K A VIKV+GRTGS+GQ TQVRV+ +D++ R I RNVKGPVR GDILTLLE+EREARR
Sbjct: 9 GVKMAKVIKVLGRTGSQGQRTQVRVEXLDESNRSIIRNVKGPVREGDILTLLETEREARR 68
Query: 65 LR 66
LR
Sbjct: 69 LR 70
>gi|50292107|ref|XP_448486.1| 40S ribosomal protein S28 [Candida glabrata CBS 138]
gi|50293097|ref|XP_448971.1| 40S ribosomal protein S28 [Candida glabrata CBS 138]
gi|51316596|sp|Q6FLC3.1|RS28_CANGA RecName: Full=40S ribosomal protein S28
gi|49527798|emb|CAG61447.1| unnamed protein product [Candida glabrata]
gi|49528284|emb|CAG61941.1| unnamed protein product [Candida glabrata]
Length = 67
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD P A VIKV+GRTGSRG VTQVRV+F++DT R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDNKTPVTLARVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|339244003|ref|XP_003377927.1| conserved domain protein [Trichinella spiralis]
gi|316973208|gb|EFV56828.1| conserved domain protein [Trichinella spiralis]
Length = 108
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 49/56 (87%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V K++GRTGS+GQ TQVRV+F+ D KR I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 53 VTKILGRTGSQGQCTQVRVEFIGDPKRCIIRNVKGPVREGDILTLLESEREARRLR 108
>gi|409083423|gb|EKM83780.1| hypothetical protein AGABI1DRAFT_51234 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 103
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 9 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTSRTIIRNVKGPVREEDILALLESEREAR 65
>gi|367002866|ref|XP_003686167.1| 40S ribosomal protein S28 [Tetrapisispora phaffii CBS 4417]
gi|357524467|emb|CCE63733.1| hypothetical protein TPHA_0F02520 [Tetrapisispora phaffii CBS
4417]
Length = 67
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ P A VIKV+GRTGSRG VTQVRV+F++D+ R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDSSRTIVRNVKGPVRENDILVLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|58266788|ref|XP_570550.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226783|gb|AAW43243.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 61
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%)
Query: 14 VIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 9 VLGRTGSRGGVTQVRVEFMDDSNRSIIRNVKGPVRVNDILALLESEREARRLR 61
>gi|443732768|gb|ELU17363.1| hypothetical protein CAPTEDRAFT_163836, partial [Capitella
teleta]
Length = 61
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V K++GRTGS+GQ TQVRV+F+D++ R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 VTKILGRTGSQGQCTQVRVEFLDESSRSIIRNVKGPVREGDILTLLESEREARRLR 61
>gi|58382122|ref|XP_311696.2| AGAP003412-PA [Anopheles gambiae str. PEST]
gi|55242576|gb|EAA07405.2| AGAP003412-PA [Anopheles gambiae str. PEST]
gi|114864969|gb|ABI83789.1| 40S ribosomal protein S28 [Anopheles funestus]
Length = 65
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ TQV+V+F+++ RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVTKVLGRTGSQGQCTQVKVEFLNEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|61654758|gb|AAX48905.1| S28 [Suberites domuncula]
Length = 63
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ A VIK++GRTGS+GQ TQVRV+F+DD R I RNVKGPVR GD+L LLESEREARRL
Sbjct: 4 PRYAKVIKILGRTGSQGQATQVRVEFLDDG-RAIIRNVKGPVREGDVLCLLESEREARRL 62
Query: 66 R 66
R
Sbjct: 63 R 63
>gi|391345755|ref|XP_003747149.1| PREDICTED: 40S ribosomal protein S28-like [Metaseiulus
occidentalis]
Length = 64
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ TQVRV+F+D++ R I RNVKGPVR DILTLLESEREARRLR
Sbjct: 7 ARVTKVLGRTGSQGQCTQVRVEFLDESNRSIIRNVKGPVRENDILTLLESEREARRLR 64
>gi|134035988|gb|ABO47825.1| ribosomal protein S28 [Heliconius melpomene]
Length = 65
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 52/58 (89%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ +T RQI +NVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVMKVLGRTGSQGQCTQVKVEFLGETSRQIIKNVKGPVRDGDILTLLESEREARRLR 65
>gi|91094381|ref|XP_971000.1| PREDICTED: similar to ribosomal protein S28e [Tribolium
castaneum]
gi|69608600|emb|CAJ01883.1| ribosomal protein S28e [Micromalthus debilis]
gi|69608604|emb|CAJ01884.1| ribosomal protein S28e [Mycetophagus quadripustulatus]
gi|264667435|gb|ACY71303.1| ribosomal protein S28 [Chrysomela tremula]
gi|270014912|gb|EFA11360.1| hypothetical protein TcasGA2_TC011517 [Tribolium castaneum]
Length = 65
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFIGEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|156543328|ref|XP_001606958.1| PREDICTED: 40S ribosomal protein S28-like [Nasonia vitripennis]
Length = 65
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFLGEENRQIIRNVKGPVREGDLLTLLESEREARRLR 65
>gi|343459111|gb|AEM37714.1| hypothetical protein D [Epinephelus bruneus]
Length = 69
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V +V+GR GS+GQ TQVRV+FMDD+ R I RN+KGP R GD+LTLLESEREARRLR
Sbjct: 10 KLARVTRVLGRAGSQGQCTQVRVEFMDDSNRSIIRNMKGPFREGDVLTLLESEREARRLR 69
>gi|238484047|ref|XP_002373262.1| 40S ribosomal protein S28 [Aspergillus flavus NRRL3357]
gi|317140250|ref|XP_003189250.1| 40S ribosomal protein S28 [Aspergillus oryzae RIB40]
gi|220701312|gb|EED57650.1| Ribosomal protein S28e [Aspergillus flavus NRRL3357]
Length = 68
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGPVRVDDILCLLESEREARRLR 68
>gi|256709228|gb|ACV20993.1| small subunit ribosomal protein 28 [Rhabditoides inermis]
Length = 62
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V KVIGRTGS+GQ TQVRV+F+DD + R I RNVKGPVR GD+LTLLESEREARRL
Sbjct: 2 KLAKVTKVIGRTGSQGQCTQVRVEFIDDHSNRSIIRNVKGPVREGDVLTLLESEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|290562289|gb|ADD38541.1| 40S ribosomal protein S28 [Lepeophtheirus salmonis]
Length = 65
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFLGQENRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|406606843|emb|CCH41879.1| 40S ribosomal protein S28 [Wickerhamomyces ciferrii]
Length = 67
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MDT P A V KV+GRTGSRG VTQVRV+F+DD+ R I RNVKGPVR DIL+L+ESE
Sbjct: 1 MDTKTPVTLARVKKVLGRTGSRGGVTQVRVEFIDDSSRTIVRNVKGPVRENDILSLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|453081807|gb|EMF09855.1| ribosomal protein S28e, partial [Mycosphaerella populorum SO2202]
Length = 67
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 48/59 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K VIKV+GRTGSRG V QVRV+FMDDT R I RNVKGPVR DIL LLESEREARRL
Sbjct: 9 KLVKVIKVLGRTGSRGGVCQVRVEFMDDTTRSIIRNVKGPVREDDILCLLESEREARRL 67
>gi|328779779|ref|XP_003249702.1| PREDICTED: 40S ribosomal protein S28-like [Apis mellifera]
gi|350422767|ref|XP_003493276.1| PREDICTED: 40S ribosomal protein S28-like [Bombus impatiens]
gi|350422770|ref|XP_003493277.1| PREDICTED: 40S ribosomal protein S28-like [Bombus impatiens]
gi|380011140|ref|XP_003689670.1| PREDICTED: 40S ribosomal protein S28-like [Apis florea]
gi|285027703|gb|ADC34225.1| ribosomal protein S28e [Solenopsis invicta]
gi|307166370|gb|EFN60507.1| 40S ribosomal protein S28 [Camponotus floridanus]
gi|307195301|gb|EFN77249.1| 40S ribosomal protein S28 [Harpegnathos saltator]
gi|332022410|gb|EGI62718.1| 40S ribosomal protein S28 [Acromyrmex echinatior]
Length = 65
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDLLTLLESEREARRLR 65
>gi|312379149|gb|EFR25518.1| hypothetical protein AND_09071 [Anopheles darlingi]
Length = 232
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 8 ARVTKVLGRTGSQGQCTQVKVEFISEQNRQIIRNVKGPVREGDVLTLLESEREARRLR 65
>gi|344300846|gb|EGW31167.1| hypothetical protein SPAPADRAFT_57066 [Spathaspora passalidarum
NRRL Y-27907]
Length = 67
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGSRG VTQVRV+F++D+ R I RNVKGPVR DIL L+ESEREARRLR
Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFLEDSSRTIVRNVKGPVRENDILCLMESEREARRLR 67
>gi|126133484|ref|XP_001383267.1| 40S ribosomal protein S28 [Scheffersomyces stipitis CBS 6054]
gi|241957133|ref|XP_002421286.1| 40S ribosomal protein S28 [Candida dubliniensis CD36]
gi|126095092|gb|ABN65238.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|223644630|emb|CAX40618.1| ribosomal protein of the small subunit, putative [Candida
dubliniensis CD36]
gi|238883241|gb|EEQ46879.1| 40S ribosomal protein S28-A [Candida albicans WO-1]
gi|344299733|gb|EGW30086.1| hypothetical protein SPAPADRAFT_158503 [Spathaspora passalidarum
NRRL Y-27907]
Length = 67
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD P A VIKV+GRTGSRG VTQVRV+F++D R I RNVKGPVR DIL L+ESE
Sbjct: 1 MDAKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDASRTIVRNVKGPVRENDILCLMESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|353237939|emb|CCA69900.1| probable ribosomal protein S28B [Piriformospora indica DSM 11827]
Length = 70
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 11 KLAKVTKVLGRTGSRGGVTQVRVEFMDDPLRSIIRNVKGPVRKEDILALLESEREARRLR 70
>gi|256709204|gb|ACV20981.1| small subunit ribosomal protein 28 [Rhabditidoides sp. RS5443]
Length = 62
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+FMDD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFMDDATSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|407921688|gb|EKG14828.1| Ribosomal protein S28e [Macrophomina phaseolina MS6]
gi|407924574|gb|EKG17607.1| Histone core [Macrophomina phaseolina MS6]
Length = 68
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVRENDILCLLESEREARRLR 68
>gi|331245041|ref|XP_003335159.1| 40S ribosomal protein S28 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314149|gb|EFP90740.1| 30S ribosomal protein S28e [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 67
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MDTGGPKK-ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD+ + A V++V+GRTGSRG VTQ RV+FMDD+ R I RNVKG VR D+L+LLESE
Sbjct: 1 MDSSNKTQVARVVRVLGRTGSRGSVTQCRVEFMDDSSRSIIRNVKGAVRKSDMLSLLESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|170085263|ref|XP_001873855.1| 40S ribosomal protein S28 [Laccaria bicolor S238N-H82]
gi|164651407|gb|EDR15647.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 88
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 9 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTSRTIIRNVKGPVREEDILALLESEREAR 65
>gi|444512947|gb|ELV10221.1| Aspartyl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 362
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 6 PKKAT-VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
P K T V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGP+R GD+LTLLES RE RR
Sbjct: 301 PIKLTRVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPMREGDVLTLLESVREDRR 360
Query: 65 LR 66
LR
Sbjct: 361 LR 362
>gi|392580489|gb|EIW73616.1| hypothetical protein TREMEDRAFT_25842, partial [Tremella
mesenterica DSM 1558]
Length = 84
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A VIKV+GRTGSRG VTQVRV+F+DD R I RNVKGPVR+ DIL LLESEREAR
Sbjct: 6 KLARVIKVLGRTGSRGGVTQVRVEFLDDVSRSIIRNVKGPVRLYDILALLESEREAR 62
>gi|18858095|ref|NP_572568.1| ribosomal protein S28b [Drosophila melanogaster]
gi|125983790|ref|XP_001355660.1| GA15566 [Drosophila pseudoobscura pseudoobscura]
gi|194890478|ref|XP_001977317.1| GG18316 [Drosophila erecta]
gi|195044778|ref|XP_001991871.1| GH12901 [Drosophila grimshawi]
gi|195134759|ref|XP_002011804.1| GI14378 [Drosophila mojavensis]
gi|195350506|ref|XP_002041781.1| GM11375 [Drosophila sechellia]
gi|195393766|ref|XP_002055524.1| GJ19416 [Drosophila virilis]
gi|195446918|ref|XP_002070981.1| GK25380 [Drosophila willistoni]
gi|195481706|ref|XP_002101747.1| GE17798 [Drosophila yakuba]
gi|195565977|ref|XP_002106570.1| GD16052 [Drosophila simulans]
gi|51316939|sp|Q9W334.2|RS28_DROME RecName: Full=40S ribosomal protein S28
gi|10728547|gb|AAF46503.2| ribosomal protein S28b [Drosophila melanogaster]
gi|16769298|gb|AAL28868.1| LD23674p [Drosophila melanogaster]
gi|54643976|gb|EAL32719.1| GA15566 [Drosophila pseudoobscura pseudoobscura]
gi|190648966|gb|EDV46244.1| GG18316 [Drosophila erecta]
gi|193901629|gb|EDW00496.1| GH12901 [Drosophila grimshawi]
gi|193909058|gb|EDW07925.1| GI14378 [Drosophila mojavensis]
gi|194123586|gb|EDW45629.1| GM11375 [Drosophila sechellia]
gi|194150034|gb|EDW65725.1| GJ19416 [Drosophila virilis]
gi|194167066|gb|EDW81967.1| GK25380 [Drosophila willistoni]
gi|194189271|gb|EDX02855.1| GE17798 [Drosophila yakuba]
gi|194203950|gb|EDX17526.1| GD16052 [Drosophila simulans]
gi|220947628|gb|ACL86357.1| RpS28b-PA [synthetic construct]
gi|220956992|gb|ACL91039.1| RpS28b-PA [synthetic construct]
Length = 65
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|126137507|ref|XP_001385277.1| 40S ribosomal protein S28 [Scheffersomyces stipitis CBS 6054]
gi|126092499|gb|ABN67248.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 67
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGSRG VTQVRV+F++D+ R I RNVKGPVR DIL L+ESEREARRLR
Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFLEDSSRTIVRNVKGPVRENDILCLMESEREARRLR 67
>gi|147795546|emb|CAN67744.1| hypothetical protein VITISV_030422 [Vitis vinifera]
Length = 61
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+K +GRT SR QVTQ RV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 2 KHAMVVKXMGRTSSRXQVTQXRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARRLR 61
>gi|323457195|gb|EGB13061.1| hypothetical protein AURANDRAFT_19173 [Aureococcus
anophagefferens]
Length = 66
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MDT K A + +V+GRTG+ G VTQVRV+F+DD R I RNVKGPVR GDIL LLE ER
Sbjct: 1 MDTAPIKLAKINRVLGRTGNTGNVTQVRVEFIDDPNRSIIRNVKGPVREGDILCLLEWER 60
Query: 61 EARRLR 66
EARRLR
Sbjct: 61 EARRLR 66
>gi|51316569|sp|O61590.1|RS28_OSTOS RecName: Full=40S ribosomal protein S28
gi|2995699|gb|AAC08344.1| 40S ribosomal protein S28 [Ostertagia ostertagi]
Length = 66
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDT-KRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K IGRTGS+GQ TQVRV+FMDD R I RNVKGPVR GDILTLLE+EREARRL
Sbjct: 6 KPAXVTKNIGRTGSQGQCTQVRVEFMDDNGNRTINRNVKGPVREGDILTLLEAEREARRL 65
Query: 66 R 66
R
Sbjct: 66 R 66
>gi|389624669|ref|XP_003709988.1| 40S ribosomal protein S28 [Magnaporthe oryzae 70-15]
gi|351649517|gb|EHA57376.1| 40S ribosomal protein S28 [Magnaporthe oryzae 70-15]
gi|440467446|gb|ELQ36669.1| hypothetical protein OOU_Y34scaffold00648g16 [Magnaporthe oryzae
Y34]
gi|440480443|gb|ELQ61105.1| hypothetical protein OOW_P131scaffold01201g35 [Magnaporthe oryzae
P131]
Length = 68
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGPVRVDDILVLLESEREARRLR 68
>gi|67540924|ref|XP_664236.1| hypothetical protein AN6632.2 [Aspergillus nidulans FGSC A4]
gi|40738971|gb|EAA58161.1| hypothetical protein AN6632.2 [Aspergillus nidulans FGSC A4]
gi|259480212|tpe|CBF71137.1| TPA: Ribosomal protein S28e (AFU_orthologue; AFUA_7G04490)
[Aspergillus nidulans FGSC A4]
Length = 68
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVRVDDILCLLESEREARRLR 68
>gi|15237617|ref|NP_201219.1| 40S ribosomal protein S28-2 [Arabidopsis thaliana]
gi|464720|sp|P34789.1|RS282_ARATH RecName: Full=40S ribosomal protein S28-2
gi|409184|gb|AAA32862.1| ribosomal protein S28 [Arabidopsis thaliana]
gi|10176962|dbj|BAB10282.1| 40S ribosomal protein S28 [Arabidopsis thaliana]
gi|16648979|gb|AAL24341.1| 40S ribosomal protein S28 [Arabidopsis thaliana]
gi|20148701|gb|AAM10241.1| 40S ribosomal protein S28 [Arabidopsis thaliana]
gi|21593139|gb|AAM65088.1| 40S ribosomal protein S28 [Arabidopsis thaliana]
gi|332010463|gb|AED97846.1| 40S ribosomal protein S28-2 [Arabidopsis thaliana]
Length = 64
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V+KV+GRTGSRGQVTQVRV+F D + R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFTD-SDRFIMRNVKGPVREGDVLTLLESEREARRLR 64
>gi|256709212|gb|ACV20985.1| small subunit ribosomal protein 28 [Micoletzkya sp. WEM-2009]
Length = 62
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+FMDD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFMDDPTSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|340939518|gb|EGS20140.1| 40S ribosomal protein S28-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 68
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KFVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVRENDILVLLESEREARRLR 68
>gi|150984688|gb|ABR87599.1| small subunit ribosomal protein 28 [Koerneria sp. RS1982]
Length = 66
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T RQI RNVKGPVR GDIL LLE+EREARRL
Sbjct: 6 KLAKVTKILGRTGSQGQCTQVRVEFIDDPTSRQIIRNVKGPVREGDILNLLEAEREARRL 65
Query: 66 R 66
R
Sbjct: 66 R 66
>gi|121543975|gb|ABM55652.1| ribosomal protein S28e-like protein [Maconellicoccus hirsutus]
Length = 65
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVMKVLGRTGSQGQCTQVKVEFIGEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|393244624|gb|EJD52136.1| hypothetical protein AURDEDRAFT_56629, partial [Auricularia
delicata TFB-10046 SS5]
Length = 105
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A V+KV+GRTGSRG VTQVRV+FMDD+ R I RNVKGPVR DIL LLESEREAR
Sbjct: 7 KLARVMKVLGRTGSRGGVTQVRVEFMDDSSRSIIRNVKGPVRENDILALLESEREAR 63
>gi|449295094|gb|EMC91116.1| hypothetical protein BAUCODRAFT_315059 [Baudoinia compniacensis
UAMH 10762]
Length = 68
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|154323856|ref|XP_001561242.1| 40S ribosomal protein S28 [Botryotinia fuckeliana B05.10]
gi|347829972|emb|CCD45669.1| hypothetical protein [Botryotinia fuckeliana]
Length = 68
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|226478292|emb|CAX78411.1| 40S ribosomal protein S28 [Schistosoma japonicum]
Length = 68
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V V+GRTGS+GQ TQVRV+F+DDT R + RNVKGP+R GDILTLLE+EREARRLR
Sbjct: 9 KLARVKAVVGRTGSQGQCTQVRVEFLDDTTRTLIRNVKGPIREGDILTLLETEREARRLR 68
>gi|340380317|ref|XP_003388669.1| PREDICTED: 40S ribosomal protein S28-like [Amphimedon
queenslandica]
Length = 84
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ VIK++GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GD+L LLE EREARRL
Sbjct: 25 PRYGKVIKLLGRTGSQGQCTQVRVEFLDDS-RSIIRNVKGPVREGDVLCLLECEREARRL 83
Query: 66 R 66
R
Sbjct: 84 R 84
>gi|149235532|ref|XP_001523644.1| 40S ribosomal protein S28 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452623|gb|EDK46879.1| 40S ribosomal protein S28 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 67
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGSRG VTQVRV+F++D+ R I RNVKGPVR DIL L+ESEREARRLR
Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFLEDSTRTIVRNVKGPVRENDILCLMESEREARRLR 67
>gi|406862489|gb|EKD15539.1| 40S ribosomal protein S28 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 68
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K VI+++GRTGSRG V QVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVIRILGRTGSRGGVIQVRVEFMDDTTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|398394389|ref|XP_003850653.1| 40S ribosomal protein S28 [Zymoseptoria tritici IPO323]
gi|339470532|gb|EGP85629.1| hypothetical protein MYCGRDRAFT_81501 [Zymoseptoria tritici
IPO323]
gi|452980191|gb|EME79952.1| hypothetical protein MYCFIDRAFT_49708 [Pseudocercospora fijiensis
CIRAD86]
Length = 68
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|402081296|gb|EJT76441.1| 40S ribosomal protein S28 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 68
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVRV DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVRVDDILVLLESEREARRLR 68
>gi|171678056|ref|XP_001903978.1| hypothetical protein [Podospora anserina S mat+]
gi|170937097|emb|CAP61755.1| unnamed protein product [Podospora anserina S mat+]
Length = 68
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILVLLESEREARRLR 68
>gi|440632220|gb|ELR02139.1| 40S ribosomal protein S28 [Geomyces destructans 20631-21]
Length = 68
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 49/60 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|336376253|gb|EGO04588.1| hypothetical protein SERLA73DRAFT_118583 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389321|gb|EGO30464.1| hypothetical protein SERLADRAFT_364493 [Serpula lacrymans var.
lacrymans S7.9]
Length = 65
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A VIKV+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 9 KLAKVIKVLGRTGSRGGVTQVRVEFMDDTTRTIIRNVKGPVREEDILALLESEREAR 65
>gi|320164434|gb|EFW41333.1| hypothetical protein CAOG_06465 [Capsaspora owczarzaki ATCC
30864]
Length = 89
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 49/58 (84%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ TQVRV+F++D R I RNVKGPVR DILTL+ESEREARRLR
Sbjct: 32 ARVTKVLGRTGSQGQATQVRVEFLNDPSRSIIRNVKGPVRENDILTLMESEREARRLR 89
>gi|449550781|gb|EMD41745.1| 40S ribosomal protein S28, partial [Ceriporiopsis subvermispora
B]
Length = 64
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 48/57 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K ATV+KV+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREAR
Sbjct: 8 KLATVVKVLGRTGSRGGVTQVRVEFMDDPSRTIIRNVKGPVREKDILALLESEREAR 64
>gi|242021748|ref|XP_002431305.1| 40S ribosomal protein S28, putative [Pediculus humanus corporis]
gi|212516573|gb|EEB18567.1| 40S ribosomal protein S28, putative [Pediculus humanus corporis]
Length = 67
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 49/57 (85%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VIKV+GRTGS+GQ TQV+V+F+ D RQI RNVKGPVR GDILTLLESEREARR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFIGDQNRQIIRNVKGPVREGDILTLLESEREARRF 64
>gi|443896685|dbj|GAC74029.1| 40S ribosomal protein S28 [Pseudozyma antarctica T-34]
Length = 99
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V KV+GRTGSRG + QVRV+FMD+T+R I RNVKGPV+V DIL LLESEREARRLR
Sbjct: 44 VTKVLGRTGSRGGIIQVRVEFMDETRRSIIRNVKGPVKVDDILALLESEREARRLR 99
>gi|430814370|emb|CCJ28369.1| unnamed protein product [Pneumocystis jirovecii]
Length = 70
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVK---GPVRVGDILTLL 56
MD P K A V KV+GRTGSRG VTQVRV+FMDDT R I RNVK GPVR DIL LL
Sbjct: 1 MDNKQPVKLAKVTKVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKAGAGPVREDDILCLL 60
Query: 57 ESEREARRLR 66
ESEREARRLR
Sbjct: 61 ESEREARRLR 70
>gi|340386386|ref|XP_003391689.1| PREDICTED: 40S ribosomal protein S28-like [Amphimedon
queenslandica]
Length = 64
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P+ VIK++GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GD+L LLE EREARRL
Sbjct: 5 PRYGKVIKLLGRTGSQGQCTQVRVEFLDDS-RSIIRNVKGPVREGDVLCLLECEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|403335411|gb|EJY66879.1| 40S ribosomal protein S28-A [Oxytricha trifallax]
Length = 67
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MDTGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
MD G A V ++IG+TGSRG +TQV+V FM+DTKR + RNVKGPVR GDIL LLESE
Sbjct: 1 MDNQGEITYAEVKEIIGKTGSRGGITQVKVVFMNDTKRSLVRNVKGPVRKGDILALLESE 60
Query: 60 REARRLR 66
REARRLR
Sbjct: 61 REARRLR 67
>gi|323508327|emb|CBQ68198.1| probable 40s ribosomal protein s28 [Sporisorium reilianum SRZ2]
gi|388855138|emb|CCF51269.1| probable 40s ribosomal protein s28 [Ustilago hordei]
Length = 68
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGSRG + QVRV+FMD+T+R I RNVKGPV+ DIL LLESEREARRLR
Sbjct: 9 KLARVTKVLGRTGSRGGIIQVRVEFMDETRRSIIRNVKGPVKADDILALLESEREARRLR 68
>gi|150984686|gb|ABR87598.1| small subunit ribosomal protein 28 [Pristionchus sp. 15 RS5229]
Length = 66
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLESEREARRL
Sbjct: 6 KLAKVTKILGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDILNLLESEREARRL 65
Query: 66 R 66
R
Sbjct: 66 R 66
>gi|300175324|emb|CBK20635.2| Ribosomal protein S28e [Blastocystis hominis]
Length = 60
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 48/58 (82%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTG+ G VTQVRV FMD +KR I RNVKGPVR GDILTLLE EREARRLR
Sbjct: 3 AVVDKVLGRTGNTGNVTQVRVTFMDSSKRSIVRNVKGPVREGDILTLLEWEREARRLR 60
>gi|256709230|gb|ACV20994.1| small subunit ribosomal protein 28 [Koerneria sudhausi]
Length = 62
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K+IGRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKIIGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|208657523|gb|ACI30058.1| ribosomal protein S28b [Anopheles darlingi]
Length = 65
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 8 ARVTKVLGRTGSQGQCTQVKVEFISEQNRQIIRNVKGPVREGDVLTLLESEREARRLR 65
>gi|123431335|ref|XP_001308124.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121889788|gb|EAX95194.1| hypothetical protein TVAG_443060 [Trichomonas vaginalis G3]
Length = 68
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V +VIGRTGSRG VTQVRV+F+DD+ R + RNVKG VR GDIL+LLE+EREARRLR
Sbjct: 9 KLAVVKQVIGRTGSRGGVTQVRVEFLDDSNRSLVRNVKGAVREGDILSLLETEREARRLR 68
>gi|123415172|ref|XP_001304639.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123445844|ref|XP_001311678.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123475823|ref|XP_001321087.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123508021|ref|XP_001329545.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123975585|ref|XP_001330349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123975587|ref|XP_001330350.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886105|gb|EAX91709.1| hypothetical protein TVAG_327180 [Trichomonas vaginalis G3]
gi|121893497|gb|EAX98748.1| hypothetical protein TVAG_057380 [Trichomonas vaginalis G3]
gi|121896459|gb|EAY01610.1| hypothetical protein TVAG_272940 [Trichomonas vaginalis G3]
gi|121896460|gb|EAY01611.1| hypothetical protein TVAG_272950 [Trichomonas vaginalis G3]
gi|121903906|gb|EAY08864.1| hypothetical protein TVAG_050990 [Trichomonas vaginalis G3]
gi|121912501|gb|EAY17322.1| hypothetical protein TVAG_266850 [Trichomonas vaginalis G3]
Length = 68
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V +VIGRTGSRG VTQVRV+F+DD+ R + RNVKG VR GDIL+LLE+EREARRLR
Sbjct: 9 KLAVVKQVIGRTGSRGGVTQVRVEFLDDSNRSLVRNVKGAVREGDILSLLETEREARRLR 68
>gi|449018017|dbj|BAM81419.1| 40S ribosomal protein S28 [Cyanidioschyzon merolae strain 10D]
Length = 65
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V +++GRTGSRG V QVRV+F+DD R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 6 KLARVKQILGRTGSRGGVIQVRVEFLDDQNRSIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|350017958|dbj|GAA33451.1| small subunit ribosomal protein S28e, partial [Clonorchis
sinensis]
Length = 56
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 14 VIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V+GRTGS+GQ TQVRV+F+DD+ R I RNVKGP+R GDILTLLE+EREARRLR
Sbjct: 4 VVGRTGSQGQCTQVRVEFLDDSHRSIIRNVKGPIREGDILTLLETEREARRLR 56
>gi|187175305|ref|NP_001119669.1| ribosomal protein S28e-like [Acyrthosiphon pisum]
gi|187175307|ref|NP_001119670.1| ribosomal protein S28e-like [Acyrthosiphon pisum]
gi|193582610|ref|XP_001943747.1| PREDICTED: 40S ribosomal protein S28-like [Acyrthosiphon pisum]
gi|89473734|gb|ABD72679.1| ribosomal protein S28e-like [Acyrthosiphon pisum]
gi|89473788|gb|ABD72706.1| ribosomal protein S28e-like [Acyrthosiphon pisum]
Length = 65
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V+KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 10 VLKVLGRTGSQGQCTQVKVEFIGEQNRQIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|225714622|gb|ACO13157.1| 40S ribosomal protein S28 [Lepeophtheirus salmonis]
Length = 65
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 49/58 (84%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+GRTGS+GQ TQV+V+F+ RQ RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVIKVLGRTGSQGQCTQVKVEFLGQENRQTIRNVKGPVREGDILTLLESEREARRLR 65
>gi|256709206|gb|ACV20982.1| small subunit ribosomal protein 28 [Mononchoides sp. RS5441]
Length = 62
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFIDDATSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|402219820|gb|EJT99892.1| hypothetical protein DACRYDRAFT_55315, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 83
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 3 TGGP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESERE 61
T P K A VIKV+GRTGSRG VTQVRV+FMDDT R I RN KGP++ DIL LLESERE
Sbjct: 2 TKAPVKLARVIKVLGRTGSRGGVTQVRVEFMDDTSRSIIRNCKGPIKEDDILALLESERE 61
Query: 62 AR 63
AR
Sbjct: 62 AR 63
>gi|150984652|gb|ABR87581.1| small subunit ribosomal protein 28 [Pristionchus pacificus]
gi|150984656|gb|ABR87583.1| small subunit ribosomal protein 28 [Pristionchus lheritieri]
gi|150984658|gb|ABR87584.1| small subunit ribosomal protein 28 [Pristionchus entomophagus]
gi|150984660|gb|ABR87585.1| small subunit ribosomal protein 28 [Pristionchus uniformis]
gi|150984662|gb|ABR87586.1| small subunit ribosomal protein 28 [Pristionchus sp. 3 CZ3975]
gi|150984664|gb|ABR87587.1| small subunit ribosomal protein 28 [Pristionchus sp. 4 RS5050]
gi|150984666|gb|ABR87588.1| small subunit ribosomal protein 28 [Pristionchus aerivorus]
gi|150984668|gb|ABR87589.1| small subunit ribosomal protein 28 [Pristionchus sp. 6 RS5101]
gi|150984670|gb|ABR87590.1| small subunit ribosomal protein 28 [Pristionchus marianneae]
gi|150984672|gb|ABR87591.1| small subunit ribosomal protein 28 [Pristionchus pauli]
gi|150984674|gb|ABR87592.1| small subunit ribosomal protein 28 [Pristionchus pseudaerivorus]
gi|150984676|gb|ABR87593.1| small subunit ribosomal protein 28 [Pristionchus sp. 10 RS5133]
gi|150984678|gb|ABR87594.1| small subunit ribosomal protein 28 [Pristionchus sp. 11 RS5228]
gi|150984680|gb|ABR87595.1| small subunit ribosomal protein 28 [Pristionchus americanus]
gi|150984682|gb|ABR87596.1| small subunit ribosomal protein 28 [Pristionchus sp. 13 RS5231]
gi|150984684|gb|ABR87597.1| small subunit ribosomal protein 28 [Pristionchus sp. 14 RS5230]
gi|390135471|gb|AFL56716.1| small subunit ribosomal protein 28 [Pristionchus exspectatus]
gi|390135519|gb|AFL56740.1| small subunit ribosomal protein 28 [Pristionchus arcanus]
Length = 66
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 6 KLAKVTKILGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDILNLLEAEREARRL 65
Query: 66 R 66
R
Sbjct: 66 R 66
>gi|256709210|gb|ACV20984.1| small subunit ribosomal protein 28 [Diplogasteroides sp. 1
RS5444]
gi|256709214|gb|ACV20986.1| small subunit ribosomal protein 28 [Neodiplogaster sp. WEM-2009]
gi|256709220|gb|ACV20989.1| small subunit ribosomal protein 28 [Diplogasteroides magnus]
Length = 62
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|256709208|gb|ACV20983.1| small subunit ribosomal protein 28 [Diplogasteriana schneideri]
Length = 62
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFIDDPTSRSILRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|358057939|dbj|GAA96184.1| hypothetical protein E5Q_02848 [Mixia osmundae IAM 14324]
Length = 120
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 47/58 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
K A V KV+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREAR+
Sbjct: 9 KLAKVTKVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGPVRDNDILALLESEREARQ 66
>gi|169610187|ref|XP_001798512.1| hypothetical protein SNOG_08190 [Phaeosphaeria nodorum SN15]
gi|396459705|ref|XP_003834465.1| hypothetical protein LEMA_P061340.1 [Leptosphaeria maculans JN3]
gi|111063346|gb|EAT84466.1| hypothetical protein SNOG_08190 [Phaeosphaeria nodorum SN15]
gi|312211014|emb|CBX91100.1| hypothetical protein LEMA_P061340.1 [Leptosphaeria maculans JN3]
Length = 68
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 1 MDTG-GP-KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLES 58
MDT P K V +V+GRTGSRG VTQ RV+FMDD R I RNVKGPVR DIL LLES
Sbjct: 1 MDTAKAPVKLVKVTRVLGRTGSRGGVTQCRVEFMDDQTRSIIRNVKGPVRENDILCLLES 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|367040885|ref|XP_003650823.1| 40S ribosomal protein S28 [Thielavia terrestris NRRL 8126]
gi|346998084|gb|AEO64487.1| hypothetical protein THITE_2110661, partial [Thielavia terrestris
NRRL 8126]
Length = 67
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 48/59 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREARRL
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILVLLESEREARRL 67
>gi|388579875|gb|EIM20194.1| 40S ribosomal protein S28 [Wallemia sebi CBS 633.66]
Length = 68
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A V KV+GRTGSRG +TQVRV+F+DDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 12 KLAKVTKVLGRTGSRGGITQVRVEFLDDTSRSIIRNVKGPVREADILALLESEREAR 68
>gi|17543286|ref|NP_500115.1| Protein RPS-28 [Caenorhabditis elegans]
gi|268554093|ref|XP_002635034.1| C. briggsae CBR-RPS-28 protein [Caenorhabditis briggsae]
gi|308463729|ref|XP_003094136.1| CRE-RPS-28 protein [Caenorhabditis remanei]
gi|51316898|sp|Q95Y04.1|RS28_CAEEL RecName: Full=40S ribosomal protein S28
gi|308248127|gb|EFO92079.1| CRE-RPS-28 protein [Caenorhabditis remanei]
gi|341897911|gb|EGT53846.1| hypothetical protein CAEBREN_06861 [Caenorhabditis brenneri]
gi|351058904|emb|CCD66705.1| Protein RPS-28 [Caenorhabditis elegans]
Length = 65
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KVIGRTGS+GQ TQVRV+F++D R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 7 ARVTKVIGRTGSQGQCTQVRVEFINDQNNRSIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|340519752|gb|EGR49990.1| ribosomal protein S28 [Trichoderma reesei QM6a]
gi|358385084|gb|EHK22681.1| hypothetical protein TRIVIDRAFT_91439 [Trichoderma virens Gv29-8]
gi|358393391|gb|EHK42792.1| hypothetical protein TRIATDRAFT_300838 [Trichoderma atroviride
IMI 206040]
Length = 69
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 10 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 69
>gi|293340767|ref|XP_002724753.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
gi|293352143|ref|XP_001057887.2| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
Length = 69
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V K +GRTG +GQ TQVRV+FMDDT I RN+KGPVR GD+LT+ ESEREARRLR
Sbjct: 10 KLARVTKELGRTGLQGQCTQVRVEFMDDTSHSIIRNIKGPVREGDVLTMFESEREARRLR 69
>gi|256709232|gb|ACV20995.1| small subunit ribosomal protein 28 [Tylopharynx sp. WEM-2009]
Length = 62
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K+ GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKIFGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|256709222|gb|ACV20990.1| small subunit ribosomal protein 28 [Acrostichus sp. RS5083]
Length = 62
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLARVTKILGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|256709216|gb|ACV20987.1| small subunit ribosomal protein 28 [Myctolaimus sp. RS5442]
Length = 62
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTK-RQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD+ R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFIDDSNSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|221220918|gb|ACM09120.1| 40S ribosomal protein S28 [Salmo salar]
Length = 68
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|302404652|ref|XP_003000163.1| 40S ribosomal protein S28 [Verticillium albo-atrum VaMs.102]
gi|261360820|gb|EEY23248.1| 40S ribosomal protein S28 [Verticillium albo-atrum VaMs.102]
gi|346979706|gb|EGY23158.1| 40S ribosomal protein S28 [Verticillium dahliae VdLs.17]
Length = 68
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|302422588|ref|XP_003009124.1| 40S ribosomal protein S28 [Verticillium albo-atrum VaMs.102]
gi|261352270|gb|EEY14698.1| 40S ribosomal protein S28 [Verticillium albo-atrum VaMs.102]
gi|346970282|gb|EGY13734.1| hypothetical protein VDAG_00416 [Verticillium dahliae VdLs.17]
Length = 68
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|212545865|ref|XP_002153086.1| 40S ribosomal protein S28 [Talaromyces marneffei ATCC 18224]
gi|242820646|ref|XP_002487548.1| 40S ribosomal protein S28 [Talaromyces stipitatus ATCC 10500]
gi|242820650|ref|XP_002487549.1| 40S ribosomal protein S28 [Talaromyces stipitatus ATCC 10500]
gi|210064606|gb|EEA18701.1| Ribosomal protein S28e [Talaromyces marneffei ATCC 18224]
gi|218714013|gb|EED13437.1| Ribosomal protein S28e [Talaromyces stipitatus ATCC 10500]
gi|218714014|gb|EED13438.1| Ribosomal protein S28e [Talaromyces stipitatus ATCC 10500]
Length = 68
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|321468189|gb|EFX79175.1| hypothetical protein DAPPUDRAFT_128589 [Daphnia pulex]
Length = 65
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 49/58 (84%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ TQV+V+F+ + R I RNVKGPVR GDILTLLESEREARRLR
Sbjct: 8 ARVTKVLGRTGSQGQCTQVKVEFLGEPNRSIIRNVKGPVREGDILTLLESEREARRLR 65
>gi|150984654|gb|ABR87582.1| small subunit ribosomal protein 28 [Pristionchus maupasi]
Length = 66
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GD+L LLE+EREARRL
Sbjct: 6 KLAKVTKILGRTGSQGQCTQVRVEFIDDPTSRSIIRNVKGPVREGDVLNLLEAEREARRL 65
Query: 66 R 66
R
Sbjct: 66 R 66
>gi|342890423|gb|EGU89241.1| hypothetical protein FOXB_00194 [Fusarium oxysporum Fo5176]
Length = 68
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|310800343|gb|EFQ35236.1| ribosomal protein S28e [Glomerella graminicola M1.001]
gi|380474013|emb|CCF46007.1| 40S ribosomal protein S28 [Colletotrichum higginsianum]
Length = 68
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|429858281|gb|ELA33106.1| ribosomal protein s28e [Colletotrichum gloeosporioides Nara gc5]
Length = 68
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEREARRLR 68
>gi|379994263|gb|AFD22758.1| 40S ribosomal protein S28 [Collodictyon triciliatum]
Length = 65
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V K +GRTGSRG +TQVRV+ MD T+R + RNVKGPVR GD++TLLESEREARRLR
Sbjct: 6 KLARVSKCLGRTGSRGGITQVRVELMDKTERSMIRNVKGPVREGDVITLLESEREARRLR 65
>gi|189204368|ref|XP_001938519.1| 40S ribosomal protein S28 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330933665|ref|XP_003304246.1| 40S ribosomal protein S28 [Pyrenophora teres f. teres 0-1]
gi|187985618|gb|EDU51106.1| 40S ribosomal protein S28 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311319241|gb|EFQ87658.1| hypothetical protein PTT_16774 [Pyrenophora teres f. teres 0-1]
gi|451847735|gb|EMD61042.1| hypothetical protein COCSADRAFT_98221 [Cochliobolus sativus
ND90Pr]
gi|451996807|gb|EMD89273.1| hypothetical protein COCHEDRAFT_1141328 [Cochliobolus
heterostrophus C5]
Length = 68
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 47/60 (78%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQ RV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQCRVEFMDDQTRSIIRNVKGPVRENDILCLLESEREARRLR 68
>gi|425856444|gb|AFX97762.1| ribosomal protein S28, partial [Galium verum var. asiaticum]
Length = 49
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 45/49 (91%)
Query: 18 TGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
TGSRGQVTQVRV+F+DD R I RNVKGPVRVGD+LTLLESEREARRLR
Sbjct: 1 TGSRGQVTQVRVKFLDDQNRSIMRNVKGPVRVGDVLTLLESEREARRLR 49
>gi|256709224|gb|ACV20991.1| small subunit ribosomal protein 28 [Pseudodiplogasteroides sp.
SB257]
Length = 62
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD T R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVQKILGRTGSQGQCTQVRVEFLDDPTSRTIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|392597278|gb|EIW86600.1| 40S ribosomal protein S28, partial [Coniophora puteana RWD-64-598
SS2]
Length = 76
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 47/57 (82%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A V+KV+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREAR
Sbjct: 8 KLAKVVKVLGRTGSRGGVTQVRVEFMDDPSRTIIRNVKGPVREQDILALLESEREAR 64
>gi|85098029|ref|XP_960561.1| 40S ribosomal protein S28 [Neurospora crassa OR74A]
gi|336276482|ref|XP_003352994.1| 40S ribosomal protein S28 [Sordaria macrospora k-hell]
gi|51316762|sp|Q7S6W5.1|RS28_NEUCR RecName: Full=40S ribosomal protein S28
gi|28922054|gb|EAA31325.1| 40S ribosomal protein S28 [Neurospora crassa OR74A]
gi|336466085|gb|EGO54250.1| hypothetical protein NEUTE1DRAFT_118111 [Neurospora tetrasperma
FGSC 2508]
gi|350287069|gb|EGZ68316.1| ribosomal protein S28e [Neurospora tetrasperma FGSC 2509]
gi|380092479|emb|CCC09756.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 68
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILVLLESEREARRLR 68
>gi|345568164|gb|EGX51065.1| hypothetical protein AOL_s00054g801 [Arthrobotrys oligospora ATCC
24927]
Length = 67
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V KV+GRTGSRG VTQVRV+F+DD R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 8 KLVKVTKVLGRTGSRGGVTQVRVEFLDDKTRSIIRNVKGPVREDDILCLLESEREARRLR 67
>gi|253747559|gb|EET02187.1| Ribosomal protein S28 [Giardia intestinalis ATCC 50581]
Length = 64
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 50/61 (81%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P A VI+V+GRT SRG +TQV+V+FM KRQI RNV GPVR+GDIL L+ESEREARRL
Sbjct: 4 PINARVIEVLGRTSSRGGITQVKVEFMTGEKRQIIRNVIGPVRLGDILILMESEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|126339035|ref|XP_001366985.1| PREDICTED: 40S ribosomal protein S28-like [Monodelphis domestica]
Length = 68
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V V+GRTGS+GQ TQVRV+FMDD R I N+KGPV+ GD+LTLLESEREARRL
Sbjct: 10 KLARVTNVLGRTGSQGQCTQVRVEFMDDRSRSIIHNMKGPVQEGDVLTLLESEREARRL 68
>gi|256709218|gb|ACV20988.1| small subunit ribosomal protein 28 [Oigolaimella attenuata]
Length = 62
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFIDDPNSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|69608596|emb|CAJ01882.1| ribosomal protein S28e [Biphyllus lunatus]
Length = 65
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLL SEREARRLR
Sbjct: 8 ARVMKVLGRTGSQGQCTQVKVEFIGEQNRQIIRNVKGPVREGDILTLLGSEREARRLR 65
>gi|109509346|ref|XP_001075416.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
gi|392338394|ref|XP_003753520.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
gi|392355298|ref|XP_003751997.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
Length = 69
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 47/59 (79%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K +G TGS+GQ TQVRV+FMDDT R I RNVKGPV D+LTLLESEREARRL
Sbjct: 10 KLARVTKALGGTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVLESDVLTLLESEREARRL 68
>gi|300121189|emb|CBK21570.2| Ribosomal protein S28e [Blastocystis hominis]
Length = 60
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTG+ G VTQVRV F+D +KR I RNVKGPVR GDILTL+E EREARRLR
Sbjct: 2 HAVVDKVLGRTGNTGNVTQVRVTFLDASKRSIVRNVKGPVREGDILTLMEWEREARRLR 60
>gi|444510383|gb|ELV09600.1| 40S ribosomal protein S28 [Tupaia chinensis]
Length = 69
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 47/58 (81%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
K A V KV+GRTGS+GQ TQV V FMDDT R + NVKGP+R GD+LTLLESEREARR
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVHVGFMDDTSRSVIPNVKGPMREGDVLTLLESEREARR 67
>gi|256709226|gb|ACV20992.1| small subunit ribosomal protein 28 [Diplogastrellus gracilis]
Length = 62
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDT-KRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQVRV+F+DD R I RNVKGPVR GDIL LLE+EREARRL
Sbjct: 2 KLAKVTKILGRTGSQGQCTQVRVEFIDDQGSRSIIRNVKGPVREGDILNLLEAEREARRL 61
Query: 66 R 66
R
Sbjct: 62 R 62
>gi|395849186|ref|XP_003797215.1| PREDICTED: 40S ribosomal protein S28-like [Otolemur garnettii]
Length = 69
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+ RTGS+GQ TQVRV+FM T R I N+KGPVR GD+LTLLESEREARRLR
Sbjct: 10 KLARVTKVLSRTGSQGQCTQVRVEFMGHTSRSIICNMKGPVREGDVLTLLESEREARRLR 69
>gi|399949618|gb|AFP65276.1| 40S ribosomal protein S28 [Chroomonas mesostigmatica CCMP1168]
Length = 65
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 50/61 (81%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K+IG+TGSRG +TQV+V+F+++ R I RNVKGPVR GDIL LLESEREARRL
Sbjct: 5 AKLAKVSKIIGKTGSRGGITQVKVEFLENKMRTIIRNVKGPVREGDILILLESEREARRL 64
Query: 66 R 66
R
Sbjct: 65 R 65
>gi|170580210|ref|XP_001895164.1| 40S ribosomal protein S28 [Brugia malayi]
gi|312074354|ref|XP_003139933.1| hypothetical protein LOAG_04348 [Loa loa]
gi|158597992|gb|EDP35989.1| 40S ribosomal protein S28, putative [Brugia malayi]
gi|307764904|gb|EFO24138.1| 30S ribosomal protein S28e [Loa loa]
gi|402591483|gb|EJW85412.1| 30S ribosomal protein S28e [Wuchereria bancrofti]
Length = 66
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V K++GRTGS+GQ TQV V F+DD + R I RNVKGPVR GDILTLLE+EREARRL
Sbjct: 6 KLAKVTKILGRTGSQGQCTQVLVDFIDDPSNRSIIRNVKGPVREGDILTLLEAEREARRL 65
Query: 66 R 66
R
Sbjct: 66 R 66
>gi|393218361|gb|EJD03849.1| 40S ribosomal protein S28, partial [Fomitiporia mediterranea
MF3/22]
Length = 80
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 2 DTGGP--KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
D+ P K A V KV+GRTGSRG VTQVRV+F+DD R + RNVKGPVR DIL LLESE
Sbjct: 1 DSKAPPVKLAKVSKVLGRTGSRGGVTQVRVEFLDDPTRSLIRNVKGPVRSEDILALLESE 60
Query: 60 REARRLR 66
REAR +
Sbjct: 61 REARYVH 67
>gi|160331295|ref|XP_001712355.1| rps28 [Hemiselmis andersenii]
gi|159765803|gb|ABW98030.1| rps28 [Hemiselmis andersenii]
Length = 65
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
G K V+K+IGRTGSRG +TQV+V+F+++ R + RNVKGP+R GD+L LLESEREAR+
Sbjct: 4 GEKLVKVLKIIGRTGSRGGITQVKVEFIENKNRTLIRNVKGPIREGDLLILLESEREARK 63
Query: 65 LR 66
LR
Sbjct: 64 LR 65
>gi|348687452|gb|EGZ27266.1| hypothetical protein PHYSODRAFT_284079 [Phytophthora sojae]
Length = 66
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V+ V+GRTG+ G VTQVRV+F+ D KR+I RNVKGPVR GDIL LLE EREARRL
Sbjct: 10 AKVVNVLGRTGNTGNVTQVRVEFLQDDKRKIIRNVKGPVREGDILCLLEWEREARRL 66
>gi|162606332|ref|XP_001713196.1| 40S ribosomal protein S28 [Guillardia theta]
gi|12580663|emb|CAC26980.1| 40S ribosomal protein S28 [Guillardia theta]
Length = 65
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
MD G K A VIK+IG+TGSRG +TQV+V+F+DD R + RNVKG VR GDIL L+ESER
Sbjct: 1 MDQTG-KLAKVIKIIGKTGSRGGITQVKVEFLDDKSRTLIRNVKGSVREGDILVLIESER 59
Query: 61 EARRLR 66
EAR+++
Sbjct: 60 EARKIK 65
>gi|443735011|gb|ELU18866.1| hypothetical protein CAPTEDRAFT_133132, partial [Capitella
teleta]
Length = 57
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
V K++GRTGS+GQ TQVRV+F+D++ R I RNVKGPVR GDILTLLESEREA
Sbjct: 6 VTKILGRTGSQGQCTQVRVEFLDESSRSIIRNVKGPVREGDILTLLESEREA 57
>gi|367030317|ref|XP_003664442.1| hypothetical protein MYCTH_36979, partial [Myceliophthora
thermophila ATCC 42464]
gi|347011712|gb|AEO59197.1| hypothetical protein MYCTH_36979, partial [Myceliophthora
thermophila ATCC 42464]
Length = 64
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 46/57 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPVR DIL LLESEREAR
Sbjct: 8 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTTRSIIRNVKGPVREDDILVLLESEREAR 64
>gi|444725170|gb|ELW65748.1| 40S ribosomal protein S28 [Tupaia chinensis]
Length = 91
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 47/60 (78%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GR GS+GQ T ++V+FMDDT I RNVKGPVR GD+L LLE EREARRLR
Sbjct: 10 KLARVTKVLGRIGSQGQCTLLQVEFMDDTSHSIIRNVKGPVREGDVLILLELEREARRLR 69
>gi|330040725|ref|XP_003240005.1| 40S ribosomal protein S28 [Cryptomonas paramecium]
gi|327206931|gb|AEA39107.1| 40S ribosomal protein S28 [Cryptomonas paramecium]
Length = 65
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
G K A V+KVIGR+G G + QV+V+F++D R I RNVKGPV+ GD+L LLESEREARR
Sbjct: 4 GEKLARVLKVIGRSGPSGNIVQVKVEFIEDNARTIIRNVKGPVKEGDVLILLESEREARR 63
Query: 65 LR 66
L+
Sbjct: 64 LK 65
>gi|87240661|gb|ABD32519.1| Ribosomal protein S28e [Medicago truncatula]
Length = 72
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGSRGQVTQVRV+ + + R I RNVKGP+R GD++ LLESEREARRLR
Sbjct: 14 KHAQVEKVMGRTGSRGQVTQVRVKILHEN-RYIMRNVKGPIRKGDVIALLESEREARRLR 72
>gi|357496609|ref|XP_003618593.1| 40S ribosomal protein S28-1 [Medicago truncatula]
gi|355493608|gb|AES74811.1| 40S ribosomal protein S28-1 [Medicago truncatula]
Length = 101
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGSRGQVTQVRV+ + + R I RNVKGP+R GD++ LLESEREARRLR
Sbjct: 43 KHAQVEKVMGRTGSRGQVTQVRVKILHEN-RYIMRNVKGPIRKGDVIALLESEREARRLR 101
>gi|403284739|ref|XP_003933714.1| PREDICTED: 40S ribosomal protein S28-like [Saimiri boliviensis
boliviensis]
Length = 93
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
V KV+GRTGS+G+ TQV V+FMDD R I RNVKGPVR GD+ TLLESEREA RL
Sbjct: 38 VTKVLGRTGSQGRCTQVHVEFMDDRSRSIIRNVKGPVRKGDVQTLLESEREAWRL 92
>gi|388510516|gb|AFK43324.1| unknown [Medicago truncatula]
Length = 64
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGSRGQVTQVRV+ + + R I RNVKGP+R GD++ LLESEREARRLR
Sbjct: 6 KHAQVEKVMGRTGSRGQVTQVRVKILHEN-RYIMRNVKGPIRKGDVIALLESEREARRLR 64
>gi|85000793|ref|XP_955115.1| 40S ribosomal protein S28 [Theileria annulata strain Ankara]
gi|65303261|emb|CAI75639.1| 40S ribosomal protein S28, putative [Theileria annulata]
gi|403223032|dbj|BAM41163.1| 40S ribosomal protein S28 [Theileria orientalis strain Shintoku]
Length = 67
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
PK A V K++GRTGSRG VTQVRV FM ++ R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 PKLAKVNKILGRTGSRGGVTQVRVDFMGESGWEGRTLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|159118723|ref|XP_001709580.1| Ribosomal protein S28 [Giardia lamblia ATCC 50803]
gi|157437697|gb|EDO81906.1| Ribosomal protein S28 [Giardia lamblia ATCC 50803]
gi|308161111|gb|EFO63570.1| Ribosomal protein S28 [Giardia lamblia P15]
Length = 64
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 48/61 (78%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
P A VI+V+GRT SRG +TQV+V+FM KRQI RNV GPVR DIL L+ESEREARRL
Sbjct: 4 PINARVIEVLGRTSSRGGITQVKVEFMTGEKRQIIRNVIGPVRKDDILVLMESEREARRL 63
Query: 66 R 66
R
Sbjct: 64 R 64
>gi|156100091|ref|XP_001615773.1| 50S ribosomal protein S28e [Plasmodium vivax Sal-1]
gi|221059223|ref|XP_002260257.1| 40S ribosomal protein S28 [Plasmodium knowlesi strain H]
gi|148804647|gb|EDL46046.1| 50S ribosomal protein S28e, putative [Plasmodium vivax]
gi|193810330|emb|CAQ41524.1| 40S ribosomal protein S28, putative [Plasmodium knowlesi strain
H]
gi|389585240|dbj|GAB67971.1| 50S ribosomal protein S28e, partial [Plasmodium cynomolgi strain
B]
Length = 67
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
K A V KV+GRTGSRG V QVR QFM DT+ R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 SKLAKVEKVLGRTGSRGGVIQVRAQFMGDTELSGRFLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|71027609|ref|XP_763448.1| 40S ribosomal protein S28e [Theileria parva strain Muguga]
gi|68350401|gb|EAN31165.1| 40S ribosomal protein S28e, putative [Theileria parva]
Length = 67
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
PK A V KV+GRTG+RG VTQVRV FM ++ R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 PKLAKVNKVLGRTGNRGGVTQVRVDFMGESGWEGRTLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|401396838|ref|XP_003879918.1| 40s ribosomal protein S28, related [Neospora caninum Liverpool]
gi|325114326|emb|CBZ49883.1| 40s ribosomal protein S28, related [Neospora caninum Liverpool]
Length = 68
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDD----TKRQITRNVKGPVRVGDILTLLESERE 61
PK A V KV+GRTGSRG V QVRV FM D R + RNVKGPVR GDIL LLE+ERE
Sbjct: 4 PKLAKVEKVLGRTGSRGGVIQVRVTFMADETDLAGRSLIRNVKGPVREGDILALLETERE 63
Query: 62 ARRLR 66
ARRLR
Sbjct: 64 ARRLR 68
>gi|237840781|ref|XP_002369688.1| 40S ribosomal protein S28, putative [Toxoplasma gondii ME49]
gi|95007409|emb|CAJ20629.1| ribosomal protein s28e, putative [Toxoplasma gondii RH]
gi|211967352|gb|EEB02548.1| 40S ribosomal protein S28, putative [Toxoplasma gondii ME49]
gi|221482904|gb|EEE21235.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221503303|gb|EEE29001.1| 40S ribosomal protein S28, putative [Toxoplasma gondii VEG]
Length = 68
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDD----TKRQITRNVKGPVRVGDILTLLESERE 61
PK A V KV+GRTGSRG V QVRV FM D R + RNVKGPVR GDIL LLE+ERE
Sbjct: 4 PKLAKVEKVLGRTGSRGGVLQVRVTFMADETDLAGRSLIRNVKGPVREGDILALLETERE 63
Query: 62 ARRLR 66
ARRLR
Sbjct: 64 ARRLR 68
>gi|209881033|ref|XP_002141955.1| 40S ribosomal protein S28 [Cryptosporidium muris RN66]
gi|209557561|gb|EEA07606.1| 40S ribosomal protein S28, putative [Cryptosporidium muris RN66]
Length = 91
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK----RQITRNVKGPVRVGDILTLLESERE 61
PK A V K++GRTGSRG V QVRVQFM R + RNV+GPVR GDIL+LLE+ERE
Sbjct: 27 PKLAKVEKILGRTGSRGGVIQVRVQFMSGEAELAGRSLIRNVRGPVREGDILSLLETERE 86
Query: 62 ARRLR 66
ARRLR
Sbjct: 87 ARRLR 91
>gi|156083811|ref|XP_001609389.1| 40S ribosomal protein S28 [Babesia bovis T2Bo]
gi|154796640|gb|EDO05821.1| 40S ribosomal protein S28 [Babesia bovis]
gi|442746419|gb|JAA65369.1| Putative ptz00085 40s ribosomal protein s28 [Ixodes ricinus]
Length = 67
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDD---TKRQITRNVKGPVRVGDILTLLESEREA 62
PK A V KV+GRTGSRG VTQVRV FM + R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 PKLAKVNKVLGRTGSRGGVTQVRVDFMGEGGWEGRVLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|428671888|gb|EKX72803.1| 40S ribosomal protein S28, putative [Babesia equi]
Length = 67
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
PK A V K++GRTGSRG V QVRV FM +T R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 PKLAKVNKILGRTGSRGGVIQVRVDFMGETGWEGRTLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|124810100|ref|XP_001348759.1| 40S ribosomal protein S28e, putative [Plasmodium falciparum 3D7]
gi|23497658|gb|AAN37198.1| 40S ribosomal protein S28e, putative [Plasmodium falciparum 3D7]
Length = 67
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
K A V KV+GRTGSRG V QVR QFM D++ R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 SKLAKVEKVLGRTGSRGGVIQVRAQFMGDSELAGRFLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|68070679|ref|XP_677251.1| ribosomal protein S28e [Plasmodium berghei strain ANKA]
gi|70924323|ref|XP_735029.1| ribosomal protein S28e [Plasmodium chabaudi chabaudi]
gi|82540107|ref|XP_724396.1| ribosomal protein S28e [Plasmodium yoelii yoelii 17XNL]
gi|23479021|gb|EAA15961.1| Ribosomal protein S28e [Plasmodium yoelii yoelii]
gi|56497293|emb|CAH96392.1| ribosomal protein S28e, putative [Plasmodium berghei]
gi|56508317|emb|CAH80423.1| ribosomal protein S28e, putative [Plasmodium chabaudi chabaudi]
Length = 67
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
K A V KV+GRTGSRG V QVR QFM D++ R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 SKLAKVEKVLGRTGSRGGVIQVRAQFMGDSELSGRFLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|399216110|emb|CCF72798.1| unnamed protein product [Babesia microti strain RI]
Length = 67
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREA 62
PK A V KV+GRTGSRG V QVRV FM ++ R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 PKLAKVNKVLGRTGSRGGVIQVRVDFMGESGWEGRTLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|66358614|ref|XP_626485.1| 40S ribosomal protein S28, no good start Met [Cryptosporidium
parvum Iowa II]
gi|46227984|gb|EAK88904.1| 40S ribosomal protein S28, no good start Met [Cryptosporidium
parvum Iowa II]
Length = 68
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTK----RQITRNVKGPVRVGDILTLLESERE 61
PK A V K++GRTGSRG V QVRVQFM R + RNV+GPVR GDIL LLE+ERE
Sbjct: 4 PKLAKVEKILGRTGSRGGVIQVRVQFMSGESELAGRSLIRNVRGPVREGDILALLETERE 63
Query: 62 ARRLR 66
ARRLR
Sbjct: 64 ARRLR 68
>gi|397614213|gb|EJK62662.1| hypothetical protein THAOC_16714, partial [Thalassiosira oceanica]
Length = 196
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-----TKRQITRNVKGPVRVGDILTLLESERE 61
K A V +V+GRTG+ G VTQVRV+FMD T R I RNVKGPVR GDIL LLE ERE
Sbjct: 132 KLAKVNRVLGRTGNTGNVTQVRVEFMDADAGTGTGRSIVRNVKGPVREGDILCLLEWERE 191
Query: 62 ARRLR 66
ARRLR
Sbjct: 192 ARRLR 196
>gi|325183099|emb|CCA17556.1| 40S ribosomal protein S28 putative [Albugo laibachii Nc14]
Length = 70
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 46/58 (79%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+ V+GRTGS G VTQV V+F+ D KR+I RNVKGPVR GDIL LLE ER ARRL+
Sbjct: 13 AKVVNVVGRTGSTGSVTQVLVEFLQDDKRKIIRNVKGPVREGDILCLLEWERVARRLQ 70
>gi|302925567|ref|XP_003054121.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735062|gb|EEU48408.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 195
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESER A
Sbjct: 13 VTRVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGPVREDDILCLLESERTA 64
>gi|224013321|ref|XP_002295312.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969035|gb|EED87378.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 67
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESERE 61
K A V +V+GRTG+ G VTQVRV+FMD T R I RNVKGPVR GDIL LLE ERE
Sbjct: 3 KLAKVNRVLGRTGNTGNVTQVRVEFMDADAGTGTGRSIVRNVKGPVREGDILCLLEWERE 62
Query: 62 ARRLR 66
ARRLR
Sbjct: 63 ARRLR 67
>gi|442755413|gb|JAA69866.1| Putative ptz00085 40s ribosomal protein s28 [Ixodes ricinus]
Length = 67
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDD---TKRQITRNVKGPVRVGDILTLLESEREA 62
PK A V KV+GRTGSRG V QVRV FM + R + RNVKGPVR GDIL LLE+EREA
Sbjct: 4 PKLAKVNKVLGRTGSRGGVPQVRVDFMGEGGWEGRVLIRNVKGPVREGDILALLETEREA 63
Query: 63 RRLR 66
RRLR
Sbjct: 64 RRLR 67
>gi|67473898|ref|XP_652698.1| 40S ribosomal protein S28 [Entamoeba histolytica HM-1:IMSS]
gi|56469577|gb|EAL47312.1| 40S ribosomal protein S28, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709330|gb|EMD48614.1| ribosomal protein S28e protein [Entamoeba histolytica KU27]
Length = 69
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V +++GRTGSRG V QVR M + RQI RNVKGP+RVGDILTLLE+EREARRLR
Sbjct: 13 AQVTEILGRTGSRGGVLQVRCDIMGE-NRQILRNVKGPIRVGDILTLLEAEREARRLR 69
>gi|109486063|ref|XP_001064782.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
gi|293349780|ref|XP_002727242.1| PREDICTED: 40S ribosomal protein S28-like [Rattus norvegicus]
Length = 69
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 47/60 (78%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRT S+ Q T +RV+FMDD+ I +NVKGPV GD+LTLLESEREA+RLR
Sbjct: 10 KLARVNKVLGRTVSQDQCTHMRVEFMDDSNHSIIQNVKGPVGEGDVLTLLESEREAQRLR 69
>gi|219129555|ref|XP_002184952.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403737|gb|EEC43688.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 67
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD--TKRQITRNVKGPVRVGDILTLLESEREARR 64
K A V +V+GRTG+ G VTQVRV+FMD R I RNVKGPVR GDIL LLE EREARR
Sbjct: 6 KLAKVNRVLGRTGNTGNVTQVRVEFMDAEGAGRSIVRNVKGPVREGDILCLLEWEREARR 65
Query: 65 LR 66
LR
Sbjct: 66 LR 67
>gi|157093575|gb|ABV22442.1| 40S ribosomal protein S28 [Oxyrrhis marina]
Length = 72
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK-----RQITRNVKGPVRVGDILTLL 56
D PK A V +++GRTGSRG V QV+V+F + R + RNVKGPVR GDIL LL
Sbjct: 3 DANAPKLAVVRQILGRTGSRGGVIQVKVEFTSEDNPELKGRSLVRNVKGPVREGDILALL 62
Query: 57 ESEREARRLR 66
E+EREARRLR
Sbjct: 63 ETEREARRLR 72
>gi|328850098|gb|EGF99267.1| hypothetical protein MELLADRAFT_40332 [Melampsora larici-populina
98AG31]
Length = 63
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K A V+K +G+TGSRG + Q RV+FMDD+ R I RNVKG VR DIL LLE EREAR
Sbjct: 6 CKLARVVKTLGKTGSRGGIMQCRVEFMDDSSRSIIRNVKGAVRENDILALLECEREAR 63
>gi|320586882|gb|EFW99545.1| ribosomal protein s28e [Grosmannia clavigera kw1407]
Length = 174
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 42/54 (77%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESER
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGPVREDDILCLLESER 62
>gi|403294829|ref|XP_003938366.1| PREDICTED: 40S ribosomal protein S28-like [Saimiri boliviensis
boliviensis]
Length = 102
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 43/54 (79%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A V KV+GRTGS+GQ QVR++F DDT I RNVKGPVR G +LTLLESEREA
Sbjct: 12 ARVTKVLGRTGSQGQCMQVRMEFRDDTSCSIIRNVKGPVREGHVLTLLESEREA 65
>gi|71416496|ref|XP_810278.1| 40S ribosomal protein S33 [Trypanosoma cruzi strain CL Brener]
gi|70874786|gb|EAN88427.1| 40S ribosomal protein S33, putative [Trypanosoma cruzi]
Length = 112
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFM-----DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M D R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 52 IIKVLGRTGSRGNVTQVRVRLMAEEGSPDANRTIVRNVKGPCKEGDMLSLMETEREARRL 111
Query: 66 R 66
R
Sbjct: 112 R 112
>gi|408400305|gb|EKJ79388.1| hypothetical protein FPSE_00430 [Fusarium pseudograminearum
CS3096]
Length = 165
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 44/57 (77%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESE+ +R
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEQSSR 65
>gi|71409193|ref|XP_806955.1| 40S ribosomal protein S33 [Trypanosoma cruzi strain CL Brener]
gi|70870845|gb|EAN85104.1| 40S ribosomal protein S33, putative [Trypanosoma cruzi]
Length = 112
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFM-----DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M D R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 52 IIKVLGRTGSRGNVTQVRVRLMAEEGSPDANRTIVRNVKGPCKEGDMLSLMETEREARRL 111
Query: 66 R 66
R
Sbjct: 112 R 112
>gi|403258038|ref|XP_003921592.1| PREDICTED: 40S ribosomal protein S28-like [Saimiri boliviensis
boliviensis]
Length = 99
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
K A V KV+GRT R Q TQVRV+FMD+T R R+VKGPVR GD+LTLLESEREA +L
Sbjct: 10 KLARVTKVLGRT--RSQCTQVRVEFMDNTSRSSIRHVKGPVREGDVLTLLESEREAWKL 66
>gi|354485473|ref|XP_003504908.1| PREDICTED: 40S ribosomal protein S28-like [Cricetulus griseus]
gi|344250425|gb|EGW06529.1| 40S ribosomal protein S28 [Cricetulus griseus]
Length = 69
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 46/60 (76%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+ RTG +GQ TQ RV+FM DT I RN+KGP+ GD+LTLLESEREA+RLR
Sbjct: 10 KLARVTKVLVRTGLQGQCTQTRVEFMVDTSSSIIRNIKGPILEGDVLTLLESEREAQRLR 69
>gi|148680335|gb|EDL12282.1| mCG1045593 [Mus musculus]
Length = 59
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 42/50 (84%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLL 56
K A V KV+GRTGS+GQ TQVRV+FMDDT R I RNVKGPVR GD+LTLL
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLL 59
>gi|46108760|ref|XP_381438.1| hypothetical protein FG01262.1 [Gibberella zeae PH-1]
Length = 171
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 43/57 (75%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGPVR DIL LLESE ++
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDILCLLESEHSSK 65
>gi|71416494|ref|XP_810277.1| 40S ribosomal protein S33 [Trypanosoma cruzi strain CL Brener]
gi|70874785|gb|EAN88426.1| 40S ribosomal protein S33, putative [Trypanosoma cruzi]
Length = 118
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M D R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 58 IIKVLGRTGSRGNVTQVRVRLMAEEGSPDANRTIVRNVKGPCKEGDMLSLMETEREARRL 117
Query: 66 R 66
R
Sbjct: 118 R 118
>gi|38048191|gb|AAR09998.1| similar to Drosophila melanogaster CG2998, partial [Drosophila
yakuba]
gi|38048513|gb|AAR10159.1| similar to Drosophila melanogaster CG2998, partial [Drosophila
yakuba]
Length = 58
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
A V+KV+GRTGS+GQ TQV+V+F+ + RQI RNVKGPVR GDILTLLESE
Sbjct: 8 ARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESE 58
>gi|67469543|ref|XP_650750.1| 40S ribosomal protein S28 [Entamoeba histolytica HM-1:IMSS]
gi|56467401|gb|EAL45362.1| 40S ribosomal protein S28, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407036015|gb|EKE37961.1| ribosomal protein S28e protein [Entamoeba nuttalli P19]
gi|449704619|gb|EMD44829.1| ribosomal protein S28e protein [Entamoeba histolytica KU27]
Length = 69
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V +++GRTGSRG V QVR + + RQI RNVKGP+RVGDILTLLE+EREARRLR
Sbjct: 13 AQVTEILGRTGSRGGVLQVRCDIIGE-NRQILRNVKGPIRVGDILTLLEAEREARRLR 69
>gi|351710044|gb|EHB12963.1| 40S ribosomal protein S28 [Heterocephalus glaber]
Length = 69
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MDT G K A V KV+GRTGS+GQ TQV V+FMDD I VKG VR GD+LTLLE
Sbjct: 1 MDTNGVQPIKLARVTKVLGRTGSQGQCTQVCVEFMDDRSCSIILKVKGAVREGDMLTLLE 60
Query: 58 SEREARRLR 66
S+ EA RLR
Sbjct: 61 SQWEAWRLR 69
>gi|71409191|ref|XP_806954.1| 40S ribosomal protein S33 [Trypanosoma cruzi strain CL Brener]
gi|70870844|gb|EAN85103.1| 40S ribosomal protein S33, putative [Trypanosoma cruzi]
Length = 119
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M D R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 59 IIKVLGRTGSRGNVTQVRVRLMAEEGSPDANRTIVRNVKGPCKEGDMLSLMETEREARRL 118
Query: 66 R 66
R
Sbjct: 119 R 119
>gi|407039852|gb|EKE39854.1| ribosomal protein S28e protein [Entamoeba nuttalli P19]
Length = 69
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V +++GRTGSRG V QVR + + RQI RNVKGP+RVGDILTLLE+EREARRLR
Sbjct: 13 AQVTEILGRTGSRGGVLQVRCDIIGE-NRQILRNVKGPIRVGDILTLLEAEREARRLR 69
>gi|340054369|emb|CCC48664.1| putative 40S ribosomal protein S33 [Trypanosoma vivax Y486]
Length = 162
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFM-----DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M + R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 102 IIKVLGRTGSRGNVTQVRVRLMGEEGSPEANRTIVRNVKGPCKEGDMLSLMETEREARRL 161
Query: 66 R 66
R
Sbjct: 162 R 162
>gi|297288183|ref|XP_002803297.1| PREDICTED: 40S ribosomal protein S28-like [Macaca mulatta]
Length = 69
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 45/60 (75%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A VIKV+ TGS+GQ T V V+FMD+ R RNVKGPV GD+LTLLESER+A +LR
Sbjct: 10 KLARVIKVLHGTGSQGQCTPVHVEFMDNMSRSSIRNVKGPVCDGDVLTLLESERDAWKLR 69
>gi|148682799|gb|EDL14746.1| mCG1045962 [Mus musculus]
Length = 73
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 45/60 (75%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V V+GRTGS+GQ TQV V+FMDDT I + VKGP R GD+LTL +SEREAR LR
Sbjct: 14 KLARVTTVLGRTGSQGQGTQVPVRFMDDTSSSIIQTVKGPFREGDVLTLWKSEREARWLR 73
>gi|72390706|ref|XP_845647.1| 40S ribosomal protein S33 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|72390708|ref|XP_845648.1| 40S ribosomal protein S33 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802226|pdb|3ZEY|Z Chain Z, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|62176789|gb|AAX70887.1| 40S ribosomal protein S33, putative [Trypanosoma brucei]
gi|62176790|gb|AAX70888.1| 40S ribosomal protein S33, putative [Trypanosoma brucei]
gi|70802183|gb|AAZ12088.1| 40S ribosomal protein S33, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70802184|gb|AAZ12089.1| 40S ribosomal protein S33, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261329052|emb|CBH12031.1| 40S ribosomal protein S33, putative [Trypanosoma brucei gambiense
DAL972]
gi|261329053|emb|CBH12032.1| 40S ribosomal protein S33, putative [Trypanosoma brucei gambiense
DAL972]
Length = 103
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFM-----DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M + R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 43 IIKVLGRTGSRGNVTQVRVRLMAEEGSPEANRTIVRNVKGPCKEGDMLSLMETEREARRL 102
Query: 66 R 66
R
Sbjct: 103 R 103
>gi|340054368|emb|CCC48663.1| putative 40S ribosomal protein S33 [Trypanosoma vivax Y486]
Length = 111
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFM-----DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M + R I RNVKGP + GD+L+L+E+EREARRL
Sbjct: 51 IIKVLGRTGSRGNVTQVRVRLMGEEGSPEANRTIVRNVKGPCKEGDMLSLMETEREARRL 110
Query: 66 R 66
R
Sbjct: 111 R 111
>gi|154339409|ref|XP_001562396.1| putative 40S ribosomal protein S33 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|154339411|ref|XP_001562397.1| putative 40S ribosomal protein S33 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062979|emb|CAM39427.1| putative 40S ribosomal protein S33 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062980|emb|CAM39428.1| putative 40S ribosomal protein S33 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 87
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M D R I RNVKGP + D+L+L+E+EREARRL
Sbjct: 27 IIKVLGRTGSRGNVTQVRVRLMAEAGSPDYNRTIVRNVKGPCKENDMLSLMETEREARRL 86
Query: 66 R 66
R
Sbjct: 87 R 87
>gi|400600699|gb|EJP68367.1| 40S ribosomal protein S28 [Beauveria bassiana ARSEF 2860]
Length = 98
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 49/90 (54%), Gaps = 30/90 (33%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP-------------------- 46
K V KVIGRTGSRG VTQVRV+FMDD+ R I RNVKGP
Sbjct: 9 KLVKVTKVIGRTGSRGGVTQVRVEFMDDSTRSIIRNVKGPGTFSTLIRPLRRIPDGSRSR 68
Query: 47 ----------VRVGDILTLLESEREARRLR 66
VR DIL LLESEREARRLR
Sbjct: 69 DLDILTLLDSVRENDILCLLESEREARRLR 98
>gi|146089910|ref|XP_001470507.1| putative 40S ribosomal protein S33 [Leishmania infantum JPCM5]
gi|146089914|ref|XP_001470508.1| putative 40S ribosomal protein S33 [Leishmania infantum JPCM5]
gi|146089918|ref|XP_001470509.1| putative 40S ribosomal protein S33 [Leishmania infantum JPCM5]
gi|157871235|ref|XP_001684167.1| putative 40S ribosomal protein S33 [Leishmania major strain
Friedlin]
gi|157871237|ref|XP_001684168.1| putative 40S ribosomal protein S33 [Leishmania major strain
Friedlin]
gi|398017119|ref|XP_003861747.1| 40S ribosomal protein S33, putative [Leishmania donovani]
gi|398017121|ref|XP_003861748.1| 40S ribosomal protein S33, putative [Leishmania donovani]
gi|401423956|ref|XP_003876464.1| putative 40S ribosomal protein S33 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401423958|ref|XP_003876465.1| putative 40S ribosomal protein S33 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|8894681|emb|CAB95841.1| ribosomal protein S33 [Leishmania infantum]
gi|68127235|emb|CAJ05355.1| putative 40S ribosomal protein S33 [Leishmania major strain
Friedlin]
gi|68127236|emb|CAJ05356.1| putative 40S ribosomal protein S33 [Leishmania major strain
Friedlin]
gi|134070540|emb|CAM68884.1| putative 40S ribosomal protein S33 [Leishmania infantum JPCM5]
gi|134070541|emb|CAM68885.1| putative 40S ribosomal protein S33 [Leishmania infantum JPCM5]
gi|134070542|emb|CAM68886.1| putative 40S ribosomal protein S33 [Leishmania infantum JPCM5]
gi|322492706|emb|CBZ27983.1| putative 40S ribosomal protein S33 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492707|emb|CBZ27984.1| putative 40S ribosomal protein S33 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322499974|emb|CBZ35049.1| 40S ribosomal protein S33, putative [Leishmania donovani]
gi|322499975|emb|CBZ35050.1| 40S ribosomal protein S33, putative [Leishmania donovani]
Length = 87
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 5/61 (8%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
+IKV+GRTGSRG VTQVRV+ M D R I RNVKGP + D+L+L+E+EREARRL
Sbjct: 27 IIKVLGRTGSRGNVTQVRVRLMAEAGSPDYNRTIVRNVKGPCKENDMLSLMETEREARRL 86
Query: 66 R 66
R
Sbjct: 87 R 87
>gi|226289517|gb|EEH45021.1| predicted protein [Paracoccidioides brasiliensis Pb18]
Length = 61
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLL 56
MD G K A V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGPV+V DIL LL
Sbjct: 1 MDISGKVPIKFAKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVKVDDILCLL 59
>gi|426327224|ref|XP_004024423.1| PREDICTED: 40S ribosomal protein S28-like, partial [Gorilla
gorilla gorilla]
Length = 80
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V KV+GRTGS+GQ +QV ++FM+D R I NVKGPV GD+LTLL+SE E RLR
Sbjct: 25 VTKVLGRTGSKGQWSQVCMEFMEDASRSIIHNVKGPVCEGDVLTLLQSEPEVGRLR 80
>gi|402863288|ref|XP_003895958.1| PREDICTED: 40S ribosomal protein S28-like [Papio anubis]
Length = 79
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VIKV+ RTGS+GQ V V+FMD+ R NVKGPV GD+LTLLESEREA +L
Sbjct: 22 ARVIKVLRRTGSQGQYPPVHVEFMDNMSRSSIHNVKGPVCEGDVLTLLESEREAWKLH 79
>gi|330799704|ref|XP_003287882.1| hypothetical protein DICPUDRAFT_47614 [Dictyostelium purpureum]
gi|325082085|gb|EGC35579.1| hypothetical protein DICPUDRAFT_47614 [Dictyostelium purpureum]
Length = 71
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREARRL 65
A V +V+ RTGSRG VTQVRV+F+ K R + RNVKGPVR DIL LLE+EREARRL
Sbjct: 11 AKVTEVLCRTGSRGAVTQVRVEFLGTEKGKERTLLRNVKGPVRKDDILCLLETEREARRL 70
Query: 66 R 66
R
Sbjct: 71 R 71
>gi|345327136|ref|XP_001505507.2| PREDICTED: ELAV-like protein 1-like [Ornithorhynchus anatinus]
Length = 229
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 18 TGSRGQVTQ-VRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
G G+ Q VRV+FMDDT R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 180 AGGFGKYMQRVRVEFMDDTSRSIIRNVKGPVREGDVLTLLESEREARRLR 229
>gi|426334079|ref|XP_004028590.1| PREDICTED: 40S ribosomal protein S28-like [Gorilla gorilla gorilla]
Length = 136
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V KV+GRTGS+GQ +QV ++FM+D R I NVKGPV GD+LTLL+SE E RL
Sbjct: 81 VTKVLGRTGSKGQWSQVCMEFMEDASRSIIHNVKGPVCEGDVLTLLQSEPEVGRLH 136
>gi|118358070|ref|XP_001012283.1| Ribosomal protein S28e containing protein [Tetrahymena
thermophila]
gi|319443347|pdb|2XZM|1 Chain 1, Crystal Structure Of The Eukaryotic 40s Ribosomal
Subunit In Complex With Initiation Factor 1. This File
Contains The 40s Subunit And Initiation Factor For
Molecule 1
gi|319443382|pdb|2XZN|1 Chain 1, Crystal Structure Of The Eukaryotic 40s Ribosomal
Subunit In Complex With Initiation Factor 1. This File
Contains The 40s Subunit And Initiation Factor For
Molecule 2
gi|89294050|gb|EAR92038.1| Ribosomal protein S28e containing protein [Tetrahymena
thermophila SB210]
gi|315570347|tpg|DAA33992.1| TPA_exp: 40S ribosomal protein rpS28e [Tetrahymena thermophila]
Length = 68
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
M+T KA ++ V+G+TGSRG +TQVRV + + RQ+ RNVKG RVGD+L L+E
Sbjct: 1 MNTEETTKARIMDVLGKTGSRGGITQVRVVLISGKEEGRQLIRNVKGACRVGDVLELMEC 60
Query: 59 EREARRLR 66
EREARRLR
Sbjct: 61 EREARRLR 68
>gi|145479451|ref|XP_001425748.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145483149|ref|XP_001427597.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145537746|ref|XP_001454584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145539544|ref|XP_001455462.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145549171|ref|XP_001460265.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392820|emb|CAK58350.1| unnamed protein product [Paramecium tetraurelia]
gi|124394679|emb|CAK60199.1| unnamed protein product [Paramecium tetraurelia]
gi|124422350|emb|CAK87187.1| unnamed protein product [Paramecium tetraurelia]
gi|124423270|emb|CAK88065.1| unnamed protein product [Paramecium tetraurelia]
gi|124428094|emb|CAK92868.1| unnamed protein product [Paramecium tetraurelia]
Length = 69
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ATVI++IGRTGSRG +TQV+VQ + +R + RNV GPVR GD L L+E EREARRLR
Sbjct: 12 RATVIEIIGRTGSRGGITQVKVQLVGQ-QRTLIRNVMGPVRKGDTLELMECEREARRLR 69
>gi|66808851|ref|XP_638148.1| 40S ribosomal protein S28 [Dictyostelium discoideum AX4]
gi|74853774|sp|Q54MZ5.1|RS28_DICDI RecName: Full=40S ribosomal protein S28
gi|60466584|gb|EAL64636.1| 40S ribosomal protein S28 [Dictyostelium discoideum AX4]
Length = 72
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK---RQITRNVKGPVRVGDILTLLESEREARRL 65
A V +V+ RTGSRG VTQVRV+F+ + R + RNVKGPVR DIL LLE+EREARRL
Sbjct: 12 AKVTEVLCRTGSRGAVTQVRVEFLGTAQGKERTLLRNVKGPVRKDDILCLLETEREARRL 71
Query: 66 R 66
R
Sbjct: 72 R 72
>gi|34304494|gb|AAQ63316.1| 40S ribosomal protein S28 [Hippocampus comes]
Length = 53
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 23 QVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
++ +VRV+FMDD+ R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 10 KIARVRVEFMDDSNRSIIRNVKGPVREGDVLTLLESEREARRLR 53
>gi|340500050|gb|EGR26954.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 68
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
KA +++V+G+TGSRG +TQV+V+ + + R++ RNVKGP ++GD+L L+E EREARRL
Sbjct: 8 KARIVEVLGKTGSRGGITQVKVELITGGEKGRRLVRNVKGPTKIGDVLELMECEREARRL 67
Query: 66 R 66
R
Sbjct: 68 R 68
>gi|119590256|gb|EAW69850.1| hCG2040368 [Homo sapiens]
Length = 69
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V K++GR GS+GQ +QV ++FM+D R I NVKGPV GD+LTLL+SE E RLR
Sbjct: 14 VTKLLGRMGSKGQWSQVCMEFMEDASRSIIHNVKGPVCEGDVLTLLQSEPEVGRLR 69
>gi|385805494|ref|YP_005841892.1| 30S ribosomal protein S28e [Fervidicoccus fontis Kam940]
gi|383795357|gb|AFH42440.1| 30S ribosomal protein S28e [Fervidicoccus fontis Kam940]
Length = 79
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G++ QVRV+ ++ D R +TRNVKGPVR+GDIL L E+EREARRL
Sbjct: 18 AEVIQIIGRTGVTGEIIQVRVRVLEGRDKGRVLTRNVKGPVRIGDILILRETEREARRL 76
>gi|402857002|ref|XP_003893064.1| PREDICTED: 40S ribosomal protein S28-like [Papio anubis]
Length = 69
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GRTGS+GQ TQ+R++FM+DT I NVKG + G +LTLLESE E RL
Sbjct: 10 KLARVTKVLGRTGSKGQCTQMRMEFMEDTSCSIIHNVKGSMCEGFVLTLLESEPEVGRLH 69
>gi|109017957|ref|XP_001084610.1| PREDICTED: 40S ribosomal protein S28-like [Macaca mulatta]
Length = 69
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K A V KV+GR GS+GQ TQ+R++FM+DT I NVKG + G +LTLLESE E RL
Sbjct: 10 KLARVTKVLGRAGSKGQCTQMRMEFMEDTSCSIIHNVKGSMCEGSVLTLLESEPEVGRLH 69
>gi|301779766|ref|XP_002925302.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S28-like
[Ailuropoda melanoleuca]
Length = 69
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 1 MDTGGPKKAT---VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLE 57
MDT G + T V KV GRT +GQ TQV ++FMDD I N+K PV G +LTLLE
Sbjct: 1 MDTSGVQPITLARVTKVTGRTSLQGQCTQVXLEFMDDMNCSIICNIKSPVCXGHMLTLLE 60
Query: 58 SEREARRL 65
S++EA+RL
Sbjct: 61 SKQEAQRL 68
>gi|395858679|ref|XP_003801688.1| PREDICTED: 40S ribosomal protein S28-like [Otolemur garnettii]
Length = 69
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 41/58 (70%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V KV+GRTGS+GQ QV + FMDD + +VKGPV ++LTLLESE+EA RL
Sbjct: 12 ARVTKVLGRTGSQGQCMQVHMDFMDDLSCSVICSVKGPVCKSEVLTLLESEQEAPRLH 69
>gi|315425797|dbj|BAJ47451.1| small subunit ribosomal protein S28e [Candidatus Caldiarchaeum
subterraneum]
gi|315427679|dbj|BAJ49275.1| small subunit ribosomal protein S28e [Candidatus Caldiarchaeum
subterraneum]
gi|343484636|dbj|BAJ50290.1| small subunit ribosomal protein S28e [Candidatus Caldiarchaeum
subterraneum]
Length = 73
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREAR 63
P A V +V+GRTG G+VTQVRV+ + D R I+RNVKGPVRVGDIL LL++EREA
Sbjct: 11 PVPAVVEQVVGRTGVTGEVTQVRVRILKGKDEGRVISRNVKGPVRVGDILMLLDTEREAE 70
Query: 64 RLR 66
+++
Sbjct: 71 KIK 73
>gi|126465726|ref|YP_001040835.1| 30S ribosomal protein S28 [Staphylothermus marinus F1]
gi|126014549|gb|ABN69927.1| SSU ribosomal protein S28E [Staphylothermus marinus F1]
Length = 89
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G++ QVRV+ ++ D R ITRNVKGPVR+GDIL L E+EREAR+L
Sbjct: 27 AEVIQIIGRTGVTGEIIQVRVRVLEGRDKGRIITRNVKGPVRLGDILILRETEREARKL 85
>gi|397466149|ref|XP_003804831.1| PREDICTED: uncharacterized protein LOC100977818 [Pan paniscus]
Length = 234
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
K V K++GRTGS+GQ +QV ++FM+D R I NVKGPV GD+LTLL+SE E RLR
Sbjct: 175 KLVRVTKLLGRTGSKGQWSQVCMEFMEDASRSIIHNVKGPVCEGDVLTLLQSEPEVGRLR 234
>gi|296243108|ref|YP_003650595.1| 30S ribosomal protein S28E [Thermosphaera aggregans DSM 11486]
gi|296095692|gb|ADG91643.1| SSU ribosomal protein S28E [Thermosphaera aggregans DSM 11486]
Length = 89
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G++ QVRV+ ++ D R ITRNVKGPVR+GDI+ L E+EREAR+L
Sbjct: 27 AEVIQIIGRTGVSGEIIQVRVRVLEGRDKGRIITRNVKGPVRIGDIVILRETEREARKL 85
>gi|347523480|ref|YP_004781050.1| 30S ribosomal protein S28e [Pyrolobus fumarii 1A]
gi|343460362|gb|AEM38798.1| Ribosomal protein S28e [Pyrolobus fumarii 1A]
Length = 98
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI++IGRTG G+VTQVRV+ ++ D R +TRNV GPVR+GDIL L E+E
Sbjct: 31 DIGFP--AEVIQIIGRTGVTGEVTQVRVRVLEGRDKGRVLTRNVLGPVRLGDILILRETE 88
Query: 60 REARRL 65
REAR+L
Sbjct: 89 REARKL 94
>gi|297527601|ref|YP_003669625.1| 30S ribosomal protein S28e [Staphylothermus hellenicus DSM 12710]
gi|297256517|gb|ADI32726.1| Ribosomal protein S28e [Staphylothermus hellenicus DSM 12710]
Length = 89
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++GRTG G++ QVRV+ ++ D R ITRNVKGPVR+GDIL L E+EREAR+L
Sbjct: 27 AEVIQIVGRTGVTGEIIQVRVRVLEGRDKGRIITRNVKGPVRLGDILILRETEREARKL 85
>gi|34810006|pdb|1NY4|A Chain A, Solution Structure Of The 30s Ribosomal Protein S28e
From Pyrococcus Horikoshii. Northeast Structural
Genomics Consortium Target Jr19
Length = 82
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI++IGRTG+ G VTQV+V+ ++ D R I RNV+GPVRVGDIL L E+E
Sbjct: 4 DEGYP--AEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETE 61
Query: 60 REARRLR 66
REAR ++
Sbjct: 62 REAREIK 68
>gi|118431853|ref|NP_148575.2| 30S ribosomal protein S28 [Aeropyrum pernix K1]
gi|152031674|sp|Q9Y9A6.3|RS28_AERPE RecName: Full=30S ribosomal protein S28e
gi|116063175|dbj|BAA81394.2| 30S ribosomal protein S28e [Aeropyrum pernix K1]
Length = 82
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G+VTQVRV+ ++ D R +TRNV GPVR+GDIL L E+EREAR+L
Sbjct: 20 AEVIQIIGRTGVTGEVTQVRVRILEGRDKGRILTRNVIGPVRIGDILILRETEREARKL 78
>gi|156937516|ref|YP_001435312.1| 30S ribosomal protein S28 [Ignicoccus hospitalis KIN4/I]
gi|156566500|gb|ABU81905.1| SSU ribosomal protein S28E [Ignicoccus hospitalis KIN4/I]
Length = 93
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
VI++IGRTG G++TQVRV+ ++ D R +TRNVKGPVR+GDIL L E+EREAR+L
Sbjct: 33 VIQIIGRTGVTGEITQVRVRVLEGRDKGRILTRNVKGPVRLGDILILRETEREARKL 89
>gi|194769730|ref|XP_001966954.1| GF21783 [Drosophila ananassae]
gi|190622749|gb|EDV38273.1| GF21783 [Drosophila ananassae]
Length = 55
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 23 QVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ TQV+V+F+ + RQI RNVKGPVR GDILTLLESEREARRLR
Sbjct: 12 KCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESEREARRLR 55
>gi|14520883|ref|NP_126358.1| 30S ribosomal protein S28e [Pyrococcus abyssi GE5]
gi|14591281|ref|NP_143359.1| 30S ribosomal protein S28e [Pyrococcus horikoshii OT3]
gi|337283823|ref|YP_004623297.1| 30S ribosomal protein S28e [Pyrococcus yayanosii CH1]
gi|389852797|ref|YP_006355031.1| 30S ribosomal protein S28e [Pyrococcus sp. ST04]
gi|46577640|sp|P61029.1|RS28_PYRAB RecName: Full=30S ribosomal protein S28e
gi|46577641|sp|P61030.1|RS28_PYRHO RecName: Full=30S ribosomal protein S28e
gi|3257920|dbj|BAA30603.1| 71aa long hypothetical 50S ribosomal protein S28 [Pyrococcus
horikoshii OT3]
gi|5458100|emb|CAB49589.1| rps28E SSU ribosomal protein S28E [Pyrococcus abyssi GE5]
gi|334899757|gb|AEH24025.1| 30S ribosomal protein S28e [Pyrococcus yayanosii CH1]
gi|380741427|tpe|CCE70061.1| TPA: 30S ribosomal protein S28e [Pyrococcus abyssi GE5]
gi|388250103|gb|AFK22956.1| RPS28, small subunit ribosomal protein S28e [Pyrococcus sp. ST04]
Length = 71
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI++IGRTG+ G VTQV+V+ ++ D R I RNV+GPVRVGDIL L E+E
Sbjct: 4 DEGYP--AEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETE 61
Query: 60 REARRLR 66
REAR ++
Sbjct: 62 REAREIK 68
>gi|119872101|ref|YP_930108.1| 30S ribosomal protein S28 [Pyrobaculum islandicum DSM 4184]
gi|229564241|sp|A1RS33.1|RS28_PYRIL RecName: Full=30S ribosomal protein S28e
gi|119673509|gb|ABL87765.1| SSU ribosomal protein S28E [Pyrobaculum islandicum DSM 4184]
Length = 77
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++GRTG G+VTQV+V+ ++ D R +TRN+KGPVR+GDI+ L E+EREARR+
Sbjct: 16 ALVIQILGRTGVAGEVTQVKVKILEGRDKGRILTRNIKGPVRLGDIVMLRETEREARRI 74
>gi|166007601|gb|ABY77634.1| At5g03850 [Arabidopsis thaliana]
gi|166007603|gb|ABY77635.1| At5g03850 [Arabidopsis thaliana]
gi|166007605|gb|ABY77636.1| At5g03850 [Arabidopsis thaliana]
gi|166007607|gb|ABY77637.1| At5g03850 [Arabidopsis thaliana]
gi|166007609|gb|ABY77638.1| At5g03850 [Arabidopsis thaliana]
gi|166007611|gb|ABY77639.1| At5g03850 [Arabidopsis thaliana]
gi|166007613|gb|ABY77640.1| At5g03850 [Arabidopsis thaliana]
gi|166007615|gb|ABY77641.1| At5g03850 [Arabidopsis thaliana]
gi|166007617|gb|ABY77642.1| At5g03850 [Arabidopsis thaliana]
gi|166007619|gb|ABY77643.1| At5g03850 [Arabidopsis thaliana]
gi|166007621|gb|ABY77644.1| At5g03850 [Arabidopsis thaliana]
gi|166007623|gb|ABY77645.1| At5g03850 [Arabidopsis thaliana]
gi|166007625|gb|ABY77646.1| At5g03850 [Arabidopsis thaliana]
gi|166007627|gb|ABY77647.1| At5g03850 [Arabidopsis thaliana]
gi|166007629|gb|ABY77648.1| At5g03850 [Arabidopsis thaliana]
gi|166007631|gb|ABY77649.1| At5g03850 [Arabidopsis thaliana]
gi|166007633|gb|ABY77650.1| At5g03850 [Arabidopsis thaliana]
gi|166007635|gb|ABY77651.1| At5g03850 [Arabidopsis thaliana]
gi|166007637|gb|ABY77652.1| At5g03850 [Arabidopsis thaliana]
gi|166007639|gb|ABY77653.1| At5g03850 [Arabidopsis thaliana]
gi|166007641|gb|ABY77654.1| At5g03850 [Arabidopsis thaliana]
gi|166007643|gb|ABY77655.1| At5g03850 [Arabidopsis thaliana]
gi|166007645|gb|ABY77656.1| At5g03850-like protein [Arabidopsis lyrata]
Length = 52
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILT 54
K A V+KV+GRTGSRGQVTQVRV+F D+ R I RNVKGPVR GDILT
Sbjct: 6 KHAVVVKVMGRTGSRGQVTQVRVKFT-DSDRYIMRNVKGPVREGDILT 52
>gi|389860864|ref|YP_006363104.1| 30S ribosomal protein S28e [Thermogladius cellulolyticus 1633]
gi|388525768|gb|AFK50966.1| 30S ribosomal protein S28e [Thermogladius cellulolyticus 1633]
Length = 89
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G++ QVRV+ ++ D R ITRNVKGPVRVGDIL L E+EREA++L
Sbjct: 27 AEVVQILGRTGVTGEIIQVRVRVLEGRDKGRVITRNVKGPVRVGDILILRETEREAKKL 85
>gi|18977740|ref|NP_579097.1| 30S ribosomal protein S28 [Pyrococcus furiosus DSM 3638]
gi|397651860|ref|YP_006492441.1| 30S ribosomal protein S28e [Pyrococcus furiosus COM1]
gi|22257032|sp|Q8U159.1|RS28_PYRFU RecName: Full=30S ribosomal protein S28e
gi|428697930|pdb|3J20|X Chain X, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893479|gb|AAL81492.1| SSU ribosomal protein S28E [Pyrococcus furiosus DSM 3638]
gi|393189451|gb|AFN04149.1| 30S ribosomal protein S28e [Pyrococcus furiosus COM1]
Length = 71
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI++IGRTG+ G VTQV+V+ ++ D R I RNV+GPVR+GDIL L E+E
Sbjct: 4 DEGYP--AEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRIGDILILRETE 61
Query: 60 REARRLR 66
REAR ++
Sbjct: 62 REAREIK 68
>gi|218884662|ref|YP_002429044.1| 30S ribosomal protein S28e [Desulfurococcus kamchatkensis 1221n]
gi|218766278|gb|ACL11677.1| 30S ribosomal protein S28e [Desulfurococcus kamchatkensis 1221n]
Length = 90
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
+ G P A VI+++GRTG G++ QVRV+ ++ D R ITRN+KGPVR+GDI+ L E+E
Sbjct: 23 EIGFP--AEVIQILGRTGVTGEIIQVRVRVLEGRDKGRIITRNIKGPVRIGDIVILRETE 80
Query: 60 REARRL 65
REAR+L
Sbjct: 81 REARKL 86
>gi|320101527|ref|YP_004177119.1| 30S ribosomal protein S28E [Desulfurococcus mucosus DSM 2162]
gi|319753879|gb|ADV65637.1| SSU ribosomal protein S28E [Desulfurococcus mucosus DSM 2162]
Length = 90
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++GRTG G++ QVRV+ ++ D R ITRNVKGPVRVGDI+ L E+EREAR+L
Sbjct: 28 AEVIQILGRTGVTGEIIQVRVRVLEGRDRGRIITRNVKGPVRVGDIVILRETEREARKL 86
>gi|390939149|ref|YP_006402887.1| 30S ribosomal protein S28e [Desulfurococcus fermentans DSM 16532]
gi|390192256|gb|AFL67312.1| Ribosomal protein S28e [Desulfurococcus fermentans DSM 16532]
Length = 86
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
+ G P A VI+++GRTG G++ QVRV+ ++ D R ITRN+KGPVR+GDI+ L E+E
Sbjct: 19 EIGFP--AEVIQILGRTGVTGEIIQVRVRVLEGRDKGRIITRNIKGPVRIGDIVILRETE 76
Query: 60 REARRL 65
REAR+L
Sbjct: 77 REARKL 82
>gi|302348879|ref|YP_003816517.1| 30S ribosomal protein S28e [Acidilobus saccharovorans 345-15]
gi|302329291|gb|ADL19486.1| 30S ribosomal protein S28e [Acidilobus saccharovorans 345-15]
Length = 83
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G+VTQVRV+ ++ D R ITRNV G VRVGDI+ L E+EREAR+L
Sbjct: 21 AEVIQIIGRTGVAGEVTQVRVRILEGKDKGRIITRNVMGSVRVGDIIILRETEREARKL 79
>gi|305662647|ref|YP_003858935.1| 30S ribosomal protein S28E [Ignisphaera aggregans DSM 17230]
gi|304377216|gb|ADM27055.1| SSU ribosomal protein S28E [Ignisphaera aggregans DSM 17230]
Length = 87
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V+++IGRTG G+V QVRV+ ++ D R +TRNV+GPVRVGDI+ L E+EREAR+L
Sbjct: 25 AEVVQIIGRTGVTGEVIQVRVRILEGRDKGRILTRNVRGPVRVGDIIILRETEREARKL 83
>gi|227828168|ref|YP_002829948.1| 30S ribosomal protein S28e [Sulfolobus islandicus M.14.25]
gi|227830875|ref|YP_002832655.1| 30S ribosomal protein S28e [Sulfolobus islandicus L.S.2.15]
gi|229579761|ref|YP_002838160.1| 30S ribosomal protein S28e [Sulfolobus islandicus Y.G.57.14]
gi|229581570|ref|YP_002839969.1| 30S ribosomal protein S28e [Sulfolobus islandicus Y.N.15.51]
gi|229585397|ref|YP_002843899.1| 30S ribosomal protein S28e [Sulfolobus islandicus M.16.27]
gi|238620358|ref|YP_002915184.1| 30S ribosomal protein S28e [Sulfolobus islandicus M.16.4]
gi|284998382|ref|YP_003420150.1| Ribosomal protein S28e [Sulfolobus islandicus L.D.8.5]
gi|385773838|ref|YP_005646405.1| 30S ribosomal protein S28e [Sulfolobus islandicus HVE10/4]
gi|385776473|ref|YP_005649041.1| 30S ribosomal protein S28e [Sulfolobus islandicus REY15A]
gi|227457323|gb|ACP36010.1| Ribosomal protein S28e [Sulfolobus islandicus L.S.2.15]
gi|227459964|gb|ACP38650.1| Ribosomal protein S28e [Sulfolobus islandicus M.14.25]
gi|228010476|gb|ACP46238.1| Ribosomal protein S28e [Sulfolobus islandicus Y.G.57.14]
gi|228012286|gb|ACP48047.1| Ribosomal protein S28e [Sulfolobus islandicus Y.N.15.51]
gi|228020447|gb|ACP55854.1| Ribosomal protein S28e [Sulfolobus islandicus M.16.27]
gi|238381428|gb|ACR42516.1| Ribosomal protein S28e [Sulfolobus islandicus M.16.4]
gi|284446278|gb|ADB87780.1| Ribosomal protein S28e [Sulfolobus islandicus L.D.8.5]
gi|323475221|gb|ADX85827.1| ribosomal protein S28e [Sulfolobus islandicus REY15A]
gi|323477953|gb|ADX83191.1| Ribosomal protein S28e [Sulfolobus islandicus HVE10/4]
Length = 98
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRNVKGPVRVGDIL L E+EREAR++
Sbjct: 36 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRVGDILILRETEREARKI 94
>gi|119719410|ref|YP_919905.1| 30S ribosomal protein S28e [Thermofilum pendens Hrk 5]
gi|166225229|sp|A1RXH2.1|RS28_THEPD RecName: Full=30S ribosomal protein S28e
gi|119524530|gb|ABL77902.1| SSU ribosomal protein S28E [Thermofilum pendens Hrk 5]
Length = 77
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V+++IGRTG G+VTQVRV+ ++ D R +TRNV+GPVRVGDI+ L E+EREAR++
Sbjct: 16 AEVVQIIGRTGITGEVTQVRVRVLEGRDKGRILTRNVRGPVRVGDIVMLRETEREARKI 74
>gi|15897178|ref|NP_341783.1| 30S ribosomal protein S28e [Sulfolobus solfataricus P2]
gi|284174423|ref|ZP_06388392.1| 30S ribosomal protein S28e [Sulfolobus solfataricus 98/2]
gi|13813369|gb|AAK40573.1| SSU ribosomal protein S28E (rps28E) [Sulfolobus solfataricus P2]
Length = 98
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRNVKGPVRVGDIL L E+EREAR++
Sbjct: 36 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRVGDILILRETEREARKI 94
>gi|70606501|ref|YP_255371.1| 30S ribosomal protein S28e [Sulfolobus acidocaldarius DSM 639]
gi|449066713|ref|YP_007433795.1| 30S ribosomal protein S28e [Sulfolobus acidocaldarius N8]
gi|449068987|ref|YP_007436068.1| 30S ribosomal protein S28e [Sulfolobus acidocaldarius Ron12/I]
gi|76363392|sp|Q4JAV1.1|RS28_SULAC RecName: Full=30S ribosomal protein S28e
gi|68567149|gb|AAY80078.1| 30S ribosomal protein S28E [Sulfolobus acidocaldarius DSM 639]
gi|449035221|gb|AGE70647.1| 30S ribosomal protein S28e [Sulfolobus acidocaldarius N8]
gi|449037495|gb|AGE72920.1| 30S ribosomal protein S28e [Sulfolobus acidocaldarius Ron12/I]
Length = 84
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRNVKGPVR+GDIL L E+EREAR+L
Sbjct: 22 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRLGDILILRETEREARKL 80
>gi|15920472|ref|NP_376141.1| 30S ribosomal protein S28e [Sulfolobus tokodaii str. 7]
gi|20140153|sp|Q975Z8.1|RS28_SULTO RecName: Full=30S ribosomal protein S28e
gi|15621255|dbj|BAB65250.1| 30S ribosomal protein S28e [Sulfolobus tokodaii str. 7]
Length = 83
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRNVKGPVR+GDIL L E+EREAR+L
Sbjct: 21 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRLGDILILRETEREARKL 79
>gi|352683169|ref|YP_004893693.1| 30S ribosomal protein S28e [Thermoproteus tenax Kra 1]
gi|350275968|emb|CCC82615.1| 30S ribosomal protein S28e [Thermoproteus tenax Kra 1]
Length = 77
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+VTQV+V+ ++ D R +TRNVKGPVR+GDI+ L E+EREAR++
Sbjct: 16 AIVVQILGRTGVAGEVTQVKVKVLEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARKI 74
>gi|375082476|ref|ZP_09729533.1| 30S ribosomal protein S28e [Thermococcus litoralis DSM 5473]
gi|374742815|gb|EHR79196.1| 30S ribosomal protein S28e [Thermococcus litoralis DSM 5473]
Length = 70
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI+++GRTG G+VTQV+V+ ++ D R I RNVKGPVR+GDI+ L E+E
Sbjct: 3 DEGYP--AEVIEIVGRTGVTGEVTQVKVRVLEGMDKGRVIRRNVKGPVRIGDIVILRETE 60
Query: 60 REARRLR 66
REAR ++
Sbjct: 61 REAREIK 67
>gi|332157724|ref|YP_004423003.1| 30S ribosomal protein S28e [Pyrococcus sp. NA2]
gi|331033187|gb|AEC50999.1| 30S ribosomal protein S28e [Pyrococcus sp. NA2]
Length = 71
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI++IGRTG+ G VTQV+V+ ++ D R I RNV+GPVRVGDIL L E+EREAR ++
Sbjct: 9 AEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIK 68
>gi|384433690|ref|YP_005643048.1| 30S ribosomal protein S28e [Sulfolobus solfataricus 98/2]
gi|20140180|sp|Q980Q5.2|RS28_SULSO RecName: Full=30S ribosomal protein S28e
gi|261601844|gb|ACX91447.1| Ribosomal protein S28e [Sulfolobus solfataricus 98/2]
Length = 83
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRNVKGPVRVGDIL L E+EREAR++
Sbjct: 21 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRVGDILILRETEREARKI 79
>gi|218117292|emb|CAQ37773.1| 40S ribosomal protein S28 [Echinorhynchus truttae]
Length = 67
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
+A V ++GRTGS+GQ TQV V + R++ RNVKGPVR GD+L LLE+EREARRL
Sbjct: 7 QARVESILGRTGSQGQCTQVLVSLIGQGSEFRRLIRNVKGPVREGDVLELLETEREARRL 66
Query: 66 R 66
R
Sbjct: 67 R 67
>gi|145591958|ref|YP_001153960.1| 30S ribosomal protein S28 [Pyrobaculum arsenaticum DSM 13514]
gi|379003336|ref|YP_005259008.1| 30S ribosomal protein S28E/S33 [Pyrobaculum oguniense TE7]
gi|229564240|sp|A4WLP1.1|RS28_PYRAR RecName: Full=30S ribosomal protein S28e
gi|145283726|gb|ABP51308.1| SSU ribosomal protein S28E [Pyrobaculum arsenaticum DSM 13514]
gi|375158789|gb|AFA38401.1| Ribosomal protein S28E/S33 [Pyrobaculum oguniense TE7]
Length = 77
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
VI+++GRTG G+VTQV+V+ ++ D R +TRN+KGPVR+GDI+ L E+EREARR+
Sbjct: 18 VIQILGRTGIAGEVTQVKVKILEGRDKGRVLTRNIKGPVRLGDIVMLRETEREARRI 74
>gi|325968279|ref|YP_004244471.1| 30S ribosomal protein S28e [Vulcanisaeta moutnovskia 768-28]
gi|323707482|gb|ADY00969.1| 30S ribosomal protein S28e [Vulcanisaeta moutnovskia 768-28]
Length = 81
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+V+ VRV+ ++ D R ITRNVKGPVRVGDI+ L E+EREAR+L
Sbjct: 20 ALVVQILGRTGIAGEVSIVRVRILEGRDKGRVITRNVKGPVRVGDIVMLRETEREARKL 78
>gi|429216700|ref|YP_007174690.1| ribosomal protein S28E/S33 [Caldisphaera lagunensis DSM 15908]
gi|429133229|gb|AFZ70241.1| ribosomal protein S28E/S33 [Caldisphaera lagunensis DSM 15908]
Length = 86
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
+ G P A VI++IGRTG G+VTQVRV+ ++ D R ITRNV G VRVGDI+ L E+E
Sbjct: 19 ELGYP--AEVIQLIGRTGVAGEVTQVRVRILEGKDKGRIITRNVMGAVRVGDIIILRETE 76
Query: 60 REARRL 65
REAR+L
Sbjct: 77 REARKL 82
>gi|170290631|ref|YP_001737447.1| 30S ribosomal protein S28e [Candidatus Korarchaeum cryptofilum
OPF8]
gi|229564243|sp|B1L5N5.1|RS28_KORCO RecName: Full=30S ribosomal protein S28e
gi|170174711|gb|ACB07764.1| Ribosomal protein S28e [Candidatus Korarchaeum cryptofilum OPF8]
Length = 71
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A V+++IGRTG G+V QVR + + D R +TRNVKGPVRVGDIL L E+E
Sbjct: 5 DKGFP--AEVVEIIGRTGVAGEVIQVRAKILAGRDKGRVLTRNVKGPVRVGDILILRETE 62
Query: 60 REARRLR 66
EAR+L+
Sbjct: 63 IEARKLK 69
>gi|327311385|ref|YP_004338282.1| 30S ribosomal protein S28e [Thermoproteus uzoniensis 768-20]
gi|326947864|gb|AEA12970.1| 30S ribosomal protein S28e [Thermoproteus uzoniensis 768-20]
Length = 77
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+VTQV+V+ ++ D R +TRNVKGPVR+GDI+ L E+EREAR++
Sbjct: 16 AIVVQILGRTGVAGEVTQVKVRVLEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARKI 74
>gi|333911525|ref|YP_004485258.1| 30S ribosomal protein S28 [Methanotorris igneus Kol 5]
gi|333752114|gb|AEF97193.1| 30S ribosomal protein S28e [Methanotorris igneus Kol 5]
Length = 75
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G++TQVR + + D R +TRN+KGPVRVGDI+ L E+EREA+ L
Sbjct: 13 AEVIQIIGRTGVTGEITQVRCKILGGKDAGRVLTRNIKGPVRVGDIVMLRETEREAKPL 71
>gi|159042402|ref|YP_001541654.1| 30S ribosomal protein S28e [Caldivirga maquilingensis IC-167]
gi|157921237|gb|ABW02664.1| Ribosomal protein S28e [Caldivirga maquilingensis IC-167]
Length = 80
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+V VRV+ ++ D R ITRN+KGPVRVGDIL L E+EREAR++
Sbjct: 19 AVVVQILGRTGVAGEVNIVRVRILEGRDKGRIITRNIKGPVRVGDILMLRETEREARKI 77
>gi|18314007|ref|NP_560674.1| 30S ribosomal protein S28 [Pyrobaculum aerophilum str. IM2]
gi|20140076|sp|Q8ZTA7.1|RS28_PYRAE RecName: Full=30S ribosomal protein S28e
gi|18161583|gb|AAL64856.1| ribosomal protein S28 [Pyrobaculum aerophilum str. IM2]
Length = 77
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
V++++GRTG G+VTQV+++ ++ D R +TRNVKGPVR+GDI+ L E+EREARR+
Sbjct: 18 VVQILGRTGIAGEVTQVKIKILEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARRI 74
>gi|284161611|ref|YP_003400234.1| 30S ribosomal protein S28e [Archaeoglobus profundus DSM 5631]
gi|284011608|gb|ADB57561.1| Ribosomal protein S28e [Archaeoglobus profundus DSM 5631]
Length = 69
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G+ TQV+V+ +D + R ITRNV GPVRVGD+L + E+ REAR+L
Sbjct: 8 AEVIEIIGRTGMHGEATQVKVKILDGPNKGRIITRNVFGPVRVGDVLMIKETAREARKL 66
>gi|307596516|ref|YP_003902833.1| 30S ribosomal protein S28e [Vulcanisaeta distributa DSM 14429]
gi|307551717|gb|ADN51782.1| Ribosomal protein S28e [Vulcanisaeta distributa DSM 14429]
Length = 80
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+V+ VRV+ ++ D R ITRN+KGPVRVGDI+ L E+EREAR+L
Sbjct: 19 ALVVQILGRTGIAGEVSIVRVRILEGRDKGRVITRNIKGPVRVGDIVMLRETEREARKL 77
>gi|171186029|ref|YP_001794948.1| 30S ribosomal protein S28e [Pyrobaculum neutrophilum V24Sta]
gi|229564266|sp|B1Y9V2.1|RS28_THENV RecName: Full=30S ribosomal protein S28e
gi|170935241|gb|ACB40502.1| Ribosomal protein S28e [Pyrobaculum neutrophilum V24Sta]
Length = 77
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
V++++GRTG G+VTQV+++ ++ D R +TRNVKGPVR+GDI+ L E+EREARR+
Sbjct: 18 VVQILGRTGVAGEVTQVKIKVLEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARRI 74
>gi|20094881|ref|NP_614728.1| 30S ribosomal protein S28 [Methanopyrus kandleri AV19]
gi|22257031|sp|Q8TVE7.1|RS28_METKA RecName: Full=30S ribosomal protein S28e
gi|19888114|gb|AAM02658.1| Ribosomal protein S28E/S33 [Methanopyrus kandleri AV19]
Length = 74
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+VTQV+V+ ++ D R ITRNVKGPVR GDIL L E+EREAR +
Sbjct: 15 AEVVEILGRTGMAGEVTQVKVRILEGPDKGRIITRNVKGPVREGDILLLRETEREARPI 73
>gi|374635965|ref|ZP_09707551.1| Ribosomal protein S28e [Methanotorris formicicus Mc-S-70]
gi|373560547|gb|EHP86806.1| Ribosomal protein S28e [Methanotorris formicicus Mc-S-70]
Length = 75
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G++TQVR + + D R +TRN+KGPVR+GDI+ L E+EREA+ L
Sbjct: 13 AEVIQIIGRTGVTGEITQVRCKILGGKDAGRVLTRNIKGPVRIGDIVMLRETEREAKPL 71
>gi|374326755|ref|YP_005084955.1| 30S ribosomal protein S28e [Pyrobaculum sp. 1860]
gi|356642024|gb|AET32703.1| 30S ribosomal protein S28e [Pyrobaculum sp. 1860]
Length = 77
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
V++++GRTG G+VTQV+++ ++ D R +TRNVKGPVR+GDI+ L E+EREARR+
Sbjct: 18 VVQILGRTGVAGEVTQVKIKVLEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARRI 74
>gi|298206417|ref|YP_003717805.1| 30S ribosomal protein S28 [Pyrobaculum calidifontis JCM 11548]
Length = 77
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
V++++GRTG G+VTQV+++ ++ D R +TRNVKGPVR+GDI+ L E+EREARR+
Sbjct: 18 VVQILGRTGVAGEVTQVKIRVLEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARRI 74
>gi|332796438|ref|YP_004457938.1| 30S ribosomal protein S28e [Acidianus hospitalis W1]
gi|332694173|gb|AEE93640.1| ribosomal protein S28e [Acidianus hospitalis W1]
Length = 83
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRN+KGPVR+GDI+ L E+EREAR+L
Sbjct: 21 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNIKGPVRLGDIVILRETEREARKL 79
>gi|374633170|ref|ZP_09705537.1| ribosomal protein S28E/S33 [Metallosphaera yellowstonensis MK1]
gi|373524654|gb|EHP69531.1| ribosomal protein S28E/S33 [Metallosphaera yellowstonensis MK1]
Length = 80
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRN+KGPVR+GDI+ L E+EREAR+L
Sbjct: 18 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNIKGPVRLGDIVILRETEREARKL 76
>gi|254167064|ref|ZP_04873917.1| ribosomal protein S28e [Aciduliprofundum boonei T469]
gi|254167618|ref|ZP_04874469.1| ribosomal protein S28e [Aciduliprofundum boonei T469]
gi|289596911|ref|YP_003483607.1| ribosomal protein S28e [Aciduliprofundum boonei T469]
gi|432329213|ref|YP_007247357.1| ribosomal protein S28E/S33 [Aciduliprofundum sp. MAR08-339]
gi|197623427|gb|EDY35991.1| ribosomal protein S28e [Aciduliprofundum boonei T469]
gi|197623920|gb|EDY36482.1| ribosomal protein S28e [Aciduliprofundum boonei T469]
gi|289534698|gb|ADD09045.1| Ribosomal protein S28e [Aciduliprofundum boonei T469]
gi|432135922|gb|AGB05191.1| ribosomal protein S28E/S33 [Aciduliprofundum sp. MAR08-339]
Length = 69
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+VTQV+V+ ++ D R +TRNV GPVRVGDIL L E+ REAR+L
Sbjct: 8 AEVVEIMGRTGMTGEVTQVKVRVLEGRDKGRILTRNVMGPVRVGDILMLRETAREARKL 66
>gi|41615149|ref|NP_963647.1| 30S ribosomal protein S28e [Nanoarchaeum equitans Kin4-M]
gi|46577310|sp|P61031.1|RS28_NANEQ RecName: Full=30S ribosomal protein S28e
gi|40068873|gb|AAR39208.1| NEQ359 [Nanoarchaeum equitans Kin4-M]
Length = 88
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG+ G+VTQV V+ ++ D R I RNVKGPVRVGDIL L E+E EAR L
Sbjct: 26 ARVVEIVGRTGTTGEVTQVIVEILEGKDAGRLIRRNVKGPVRVGDILMLRETEIEARPL 84
>gi|146302812|ref|YP_001190128.1| 30S ribosomal protein S28e [Metallosphaera sedula DSM 5348]
gi|172046877|sp|A4YCQ2.1|RS28_METS5 RecName: Full=30S ribosomal protein S28e
gi|145701062|gb|ABP94204.1| SSU ribosomal protein S28E [Metallosphaera sedula DSM 5348]
Length = 80
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRN+KGPVR+GDI+ L E+EREAR+L
Sbjct: 18 AEVIQLLDRTGVTGEVTQVRVRVLEGRDKGRILTRNIKGPVRLGDIVILRETEREARKL 76
>gi|330833894|ref|YP_004408622.1| 30S ribosomal protein S28e [Metallosphaera cuprina Ar-4]
gi|329566033|gb|AEB94138.1| 30S ribosomal protein S28e [Metallosphaera cuprina Ar-4]
Length = 80
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+++ RTG G+VTQVRV+ ++ D R +TRN+KGPVR+GDI+ L E+EREAR+L
Sbjct: 18 AEVIQLLERTGVTGEVTQVRVRVLEGRDKGRILTRNIKGPVRLGDIVILRETEREARKL 76
>gi|219851188|ref|YP_002465620.1| 30S ribosomal protein S28e [Methanosphaerula palustris E1-9c]
gi|219545447|gb|ACL15897.1| Ribosomal protein S28e [Methanosphaerula palustris E1-9c]
Length = 69
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESE 59
D G P A VI+VIG TG G+ QV+ + +D + R ITRN GP+R GDIL LLE+E
Sbjct: 3 DEGTP--AEVIEVIGSTGMHGEAMQVKCRILDGSNKGRIITRNTVGPIREGDILMLLETE 60
Query: 60 REARRL 65
REA++L
Sbjct: 61 REAKKL 66
>gi|315230882|ref|YP_004071318.1| 30S ribosomal protein S28e [Thermococcus barophilus MP]
gi|315183910|gb|ADT84095.1| SSU ribosomal protein S28e [Thermococcus barophilus MP]
Length = 69
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI+++GRTG G VTQV+V+ ++ D R I RN+KGPVRVGDI+ L E+EREAR ++
Sbjct: 8 AEVIEIVGRTGVTGGVTQVKVRVLEGRDKGRVIRRNIKGPVRVGDIVILRETEREAREIK 67
>gi|118575493|ref|YP_875236.1| ribosomal protein S28E/S33 [Cenarchaeum symbiosum A]
gi|118194014|gb|ABK76932.1| ribosomal protein S28E/S33 [Cenarchaeum symbiosum A]
Length = 70
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A +I+++GRTG G+V QVRV+ M D R +TRNVKG VR+GDIL L E+EREA++++
Sbjct: 11 AEIIQIVGRTGIAGEVIQVRVKIMAGKDQGRILTRNVKGSVRMGDILRLRETEREAKKIK 70
>gi|288931006|ref|YP_003435066.1| ribosomal protein S28e [Ferroglobus placidus DSM 10642]
gi|288893254|gb|ADC64791.1| Ribosomal protein S28e [Ferroglobus placidus DSM 10642]
Length = 69
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G+ TQV+V+ + ++ R ITRNV GPVRVGDIL + E+ REA++L
Sbjct: 8 AEVIEIIGRTGMHGEATQVKVRILAGENKGRIITRNVFGPVRVGDILMIKETAREAKKL 66
>gi|21228568|ref|NP_634490.1| 30S ribosomal protein S28 [Methanosarcina mazei Go1]
gi|452210985|ref|YP_007491099.1| 30S ribosomal protein S28e [Methanosarcina mazei Tuc01]
gi|23822139|sp|Q8PU75.1|RS28_METMA RecName: Full=30S ribosomal protein S28e
gi|20907060|gb|AAM32162.1| SSU ribosomal protein S28E [Methanosarcina mazei Go1]
gi|452100887|gb|AGF97827.1| 30S ribosomal protein S28e [Methanosarcina mazei Tuc01]
Length = 73
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
T G A VI VIG TG G+ +Q++ + ++ D R ITRN GPVR+GDIL LLE+
Sbjct: 5 STTGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILMLLETS 64
Query: 60 REARRL 65
REA++L
Sbjct: 65 REAKKL 70
>gi|296110059|ref|YP_003617008.1| ribosomal protein S28e [methanocaldococcus infernus ME]
gi|295434873|gb|ADG14044.1| Ribosomal protein S28e [Methanocaldococcus infernus ME]
Length = 75
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+++GRTG G++ QVR + + D R + RNVKGPV+VGDI+ L E+EREA
Sbjct: 9 GAVAAEVIEIVGRTGVTGEIVQVRCKILGGKDAGRVLVRNVKGPVKVGDIIMLRETEREA 68
Query: 63 RRL 65
R L
Sbjct: 69 RPL 71
>gi|15669388|ref|NP_248197.1| 30S ribosomal protein S28e [Methanocaldococcus jannaschii DSM
2661]
gi|1591832|gb|AAB99206.1| SSU ribosomal protein S28E [Methanocaldococcus jannaschii DSM
2661]
Length = 78
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIGRTG G + QVR + + DT R + RNVKGPV+VGDI+ L E+EREAR L
Sbjct: 16 AEVIEVIGRTGVTGGIIQVRCKILGGKDTGRVLVRNVKGPVKVGDIIMLRETEREARPL 74
>gi|261403449|ref|YP_003247673.1| 30S ribosomal protein S28e [Methanocaldococcus vulcanius M7]
gi|289192312|ref|YP_003458253.1| ribosomal protein S28e [Methanocaldococcus sp. FS406-22]
gi|12231024|sp|P54065.2|RS28_METJA RecName: Full=30S ribosomal protein S28e
gi|261370442|gb|ACX73191.1| Ribosomal protein S28e [Methanocaldococcus vulcanius M7]
gi|288938762|gb|ADC69517.1| Ribosomal protein S28e [Methanocaldococcus sp. FS406-22]
Length = 75
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIGRTG G + QVR + + DT R + RNVKGPV+VGDI+ L E+EREAR L
Sbjct: 13 AEVIEVIGRTGVTGGIIQVRCKILGGKDTGRVLVRNVKGPVKVGDIIMLRETEREARPL 71
>gi|73670825|ref|YP_306840.1| 30S ribosomal protein S28 [Methanosarcina barkeri str. Fusaro]
gi|72397987|gb|AAZ72260.1| SSU ribosomal protein S28E [Methanosarcina barkeri str. Fusaro]
Length = 73
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI VIG TG G+ +Q++ + ++ D R ITRN GPVRVGDIL LLE+ REA
Sbjct: 8 GGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRVGDILMLLETSREA 67
Query: 63 RRL 65
++L
Sbjct: 68 KKL 70
>gi|294495537|ref|YP_003542030.1| 30S ribosomal protein S28E [Methanohalophilus mahii DSM 5219]
gi|292666536|gb|ADE36385.1| SSU ribosomal protein S28E [Methanohalophilus mahii DSM 5219]
Length = 71
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI VIG TG G+ +Q++ + +D D R ITRN GPVR+GD+L L+E+ REA++L
Sbjct: 10 AEVIDVIGNTGMHGEASQIQCRVLDGRDKGRIITRNCMGPVRIGDVLMLMETSREAKKL 68
>gi|256811044|ref|YP_003128413.1| 30S ribosomal protein S28e [Methanocaldococcus fervens AG86]
gi|256794244|gb|ACV24913.1| Ribosomal protein S28e [Methanocaldococcus fervens AG86]
Length = 75
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIGRTG G + QVR + + DT R + RNVKGPV+VGDI+ L E+EREAR L
Sbjct: 13 AEVIEVIGRTGVTGGILQVRCKILGGKDTGRVLVRNVKGPVKVGDIIMLRETEREARPL 71
>gi|116753648|ref|YP_842766.1| 30S ribosomal protein S28e [Methanosaeta thermophila PT]
gi|116665099|gb|ABK14126.1| SSU ribosomal protein S28E [Methanosaeta thermophila PT]
Length = 70
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIG TG G+ TQ++ + ++ + R ITRN GPVRVGD+L LLE+ REA++L
Sbjct: 9 AEVIEVIGVTGMHGEATQIKCRILEGSNKGRIITRNCMGPVRVGDVLMLLETAREAKKL 67
>gi|20090381|ref|NP_616456.1| 30S ribosomal protein S28 [Methanosarcina acetivorans C2A]
gi|22257029|sp|Q8TQL8.1|RS28_METAC RecName: Full=30S ribosomal protein S28e
gi|19915389|gb|AAM04936.1| ribosomal protein S28e [Methanosarcina acetivorans C2A]
Length = 76
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
T G A VI VIG TG G+ +Q++ + ++ D R ITRN GPVR+GDIL LLE+
Sbjct: 8 STIGGFAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRVITRNCVGPVRIGDILMLLETS 67
Query: 60 REARRL 65
REA++L
Sbjct: 68 REAKKL 73
>gi|409095226|ref|ZP_11215250.1| 30S ribosomal protein S28e [Thermococcus zilligii AN1]
Length = 71
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ VI++IGRTG G VTQV+V+ ++ D R I RNVKGPVRVGDI+ L E+EREAR ++
Sbjct: 9 SEVIEIIGRTGVTGGVTQVKVRVLEGRDKGRVIRRNVKGPVRVGDIVILRETEREAREIK 68
>gi|150400291|ref|YP_001324058.1| 30S ribosomal protein S28e [Methanococcus vannielii SB]
gi|166225228|sp|A6USH4.1|RS28_METVS RecName: Full=30S ribosomal protein S28e
gi|150012994|gb|ABR55446.1| Ribosomal protein S28e [Methanococcus vannielii SB]
Length = 76
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+V GRTG G++ QVR + + DT R +TRNVKGPV+VGD++ L E+EREA++L
Sbjct: 13 AEVIQVSGRTGVTGEIFQVRCKILGGKDTGRILTRNVKGPVKVGDLIMLRETEREAKQL 71
>gi|408405424|ref|YP_006863407.1| 30S ribosomal protein S28e [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|300521614|gb|ADK26018.1| r-protein S28e [Candidatus Nitrososphaera gargensis]
gi|408366020|gb|AFU59750.1| 30S ribosomal protein S28e [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 71
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI+++GRTG G+V QVRV+ ++ D R +TRNVKG VR+ D+L L E+EREAR++R
Sbjct: 12 AEVIQIVGRTGIAGEVIQVRVKVLEGKDRGRILTRNVKGSVRMNDVLMLRETEREARKIR 71
>gi|444709557|gb|ELW50566.1| 40S ribosomal protein S28 [Tupaia chinensis]
Length = 66
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLL 56
A V KV+GRTGS+GQ QV ++FMDDT I RNVK P+ GD+L LL
Sbjct: 12 ARVTKVLGRTGSQGQCRQVHLEFMDDTSSSIIRNVKNPMHEGDVLILL 59
>gi|324566161|gb|ADY49888.1| 40S ribosomal protein S28 [Ascaris suum]
Length = 63
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDIL 53
K A V K++GRTGS+GQ TQVRV F+DD + R I RNVKGPVR GDI+
Sbjct: 6 KLAKVTKILGRTGSQGQCTQVRVDFIDDPSNRSIIRNVKGPVREGDIV 53
>gi|355571280|ref|ZP_09042532.1| 30S ribosomal protein S28e [Methanolinea tarda NOBI-1]
gi|354825668|gb|EHF09890.1| 30S ribosomal protein S28e [Methanolinea tarda NOBI-1]
Length = 69
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI+VIG TG G+ QV+ + +D + R ITRN GP+R GD+L LLE+E
Sbjct: 3 DEGTP--AEVIEVIGSTGMHGEAMQVKCRILDGPNKGRIITRNTVGPIREGDVLMLLETE 60
Query: 60 REARRL 65
REA++L
Sbjct: 61 REAKKL 66
>gi|13541281|ref|NP_110969.1| 30S ribosomal protein S28e [Thermoplasma volcanium GSS1]
gi|20140163|sp|Q97BK7.1|RS28_THEVO RecName: Full=30S ribosomal protein S28e
gi|14324663|dbj|BAB59590.1| ribosomal protein small subunit S28 [Thermoplasma volcanium GSS1]
Length = 69
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 6 PKKAT---VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESER 60
P +AT V+++IGRTG G+ T V+V+ + D R I RNV GPVRVGDIL L+E+ R
Sbjct: 2 PNEATPAEVVEIIGRTGMTGEATTVKVRILSGRDQGRIIARNVLGPVRVGDILMLMETAR 61
Query: 61 EARRL 65
EA++L
Sbjct: 62 EAKKL 66
>gi|327400362|ref|YP_004341201.1| 30S ribosomal protein S28e [Archaeoglobus veneficus SNP6]
gi|327315870|gb|AEA46486.1| 30S ribosomal protein S28e [Archaeoglobus veneficus SNP6]
Length = 71
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IGRTG G+ TQV+V+ + ++ R ITRNV GPVRVGD+L + E+ REA++L
Sbjct: 10 AEVIEIIGRTGMHGEATQVKVRVLAGENKGRIITRNVFGPVRVGDVLMIKETAREAKKL 68
>gi|341581129|ref|YP_004761621.1| 30S ribosomal protein S28e [Thermococcus sp. 4557]
gi|340808787|gb|AEK71944.1| 30S ribosomal protein S28e [Thermococcus sp. 4557]
Length = 70
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI+++ R G G VTQV+V+ ++ D R I RN+KGPVRVGDI+ L E+E
Sbjct: 3 DEGYP--AEVIEIVARAGVTGGVTQVKVRVLEGRDKGRVIRRNIKGPVRVGDIVILRETE 60
Query: 60 REARRLR 66
REAR +R
Sbjct: 61 REAREIR 67
>gi|386002635|ref|YP_005920934.1| 30S ribosomal protein S28e [Methanosaeta harundinacea 6Ac]
gi|357210691|gb|AET65311.1| 30S ribosomal protein S28e [Methanosaeta harundinacea 6Ac]
Length = 71
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IG TG G+ TQ++ + ++ + R ITRN GP+R+GD+L LLE+ REA++L
Sbjct: 10 AEVIEIIGNTGMHGEATQIKCRILEGSNKGRIITRNCMGPIRMGDVLMLLETAREAKKL 68
>gi|374630421|ref|ZP_09702806.1| 30S ribosomal protein S28e [Methanoplanus limicola DSM 2279]
gi|373908534|gb|EHQ36638.1| 30S ribosomal protein S28e [Methanoplanus limicola DSM 2279]
Length = 68
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLES 58
M G P A VI+VIG TG G+ QV+ + +D + R ITRN GP+R GD+L LLE+
Sbjct: 1 MAEGTP--AEVIEVIGATGMHGEAQQVKCRILDGSNKGRIITRNTVGPIREGDVLMLLET 58
Query: 59 EREARRL 65
EREA++L
Sbjct: 59 EREAKKL 65
>gi|124486313|ref|YP_001030929.1| 30S ribosomal protein S28e [Methanocorpusculum labreanum Z]
gi|124363854|gb|ABN07662.1| SSU ribosomal protein S28E [Methanocorpusculum labreanum Z]
Length = 69
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIG TG G+ +Q++ + +D + R ITRN GP+R GDIL LLE+EREA++L
Sbjct: 8 AEVIEVIGLTGMHGEASQIKCRVLDGSNKGRIITRNTFGPIREGDILMLLETEREAKKL 66
>gi|298675307|ref|YP_003727057.1| 30S ribosomal protein S28e [Methanohalobium evestigatum Z-7303]
gi|298288295|gb|ADI74261.1| Ribosomal protein S28e [Methanohalobium evestigatum Z-7303]
Length = 71
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI VIG TG G+ +Q++ + ++ D R ITRN GPVRVGDI+ L+E+ REA++L
Sbjct: 10 AEVIDVIGNTGMHGEASQIQCRILEGRDKGRVITRNCMGPVRVGDIIVLMETSREAKKL 68
>gi|167043907|gb|ABZ08595.1| putative ribosomal protein S28e [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044602|gb|ABZ09275.1| putative ribosomal protein S28e [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 72
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI+++GRTG G+V QVRV+ ++ D R +TRN KG +R+ DIL L E+EREA+++R
Sbjct: 13 AEVIQIVGRTGIAGEVIQVRVKILEGKDKGRVLTRNAKGSIRISDILVLRETEREAKKIR 72
>gi|150400518|ref|YP_001324284.1| 30S ribosomal protein S28 [Methanococcus aeolicus Nankai-3]
gi|166225225|sp|A6UT50.1|RS28_META3 RecName: Full=30S ribosomal protein S28e
gi|150013221|gb|ABR55672.1| Ribosomal protein S28e [Methanococcus aeolicus Nankai-3]
Length = 75
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++V GRTG G++ QVR + + DT R +TRN+KGP++VGDI+ L E+EREA+ L
Sbjct: 13 AEVLQVTGRTGVTGEIFQVRCKILGGKDTGRILTRNIKGPIKVGDIIMLRETEREAKAL 71
>gi|410672058|ref|YP_006924429.1| 30S ribosomal protein S28e [Methanolobus psychrophilus R15]
gi|409171186|gb|AFV25061.1| 30S ribosomal protein S28e [Methanolobus psychrophilus R15]
Length = 71
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
DTG A VI VIG TG G+ +Q++ + ++ D R ITRN GP+RVGDIL L+E+
Sbjct: 5 DTG--YAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRIITRNCVGPIRVGDILMLIETS 62
Query: 60 REARRL 65
REA++L
Sbjct: 63 REAKKL 68
>gi|336122144|ref|YP_004576919.1| 30S ribosomal protein S28e [Methanothermococcus okinawensis IH1]
gi|334856665|gb|AEH07141.1| 30S ribosomal protein S28e [Methanothermococcus okinawensis IH1]
Length = 75
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++V GRTG G++ QVR + + DT R +TRNVKGPV+VGDI+ L E+EREA+ L
Sbjct: 13 AEVLQVSGRTGVTGEIFQVRCKILGGKDTGRILTRNVKGPVKVGDIIMLRETEREAKPL 71
>gi|45358203|ref|NP_987760.1| 30S ribosomal protein S28e [Methanococcus maripaludis S2]
gi|340623821|ref|YP_004742274.1| 30S ribosomal protein S28e [Methanococcus maripaludis X1]
gi|73917996|sp|Q6LZI8.1|RS28_METMP RecName: Full=30S ribosomal protein S28e
gi|44920960|emb|CAF30196.1| SSU ribosomal protein S28E [Methanococcus maripaludis S2]
gi|339904089|gb|AEK19531.1| 30S ribosomal protein S28e [Methanococcus maripaludis X1]
Length = 76
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+V GRTG G++ QVR + + DT R +TRNVKGPV++GD++ L E+EREA++L
Sbjct: 13 AEVIQVNGRTGVTGEIFQVRCKILGGKDTGRILTRNVKGPVKLGDLIMLRETEREAKQL 71
>gi|16082137|ref|NP_394574.1| 30S ribosomal protein S28e [Thermoplasma acidophilum DSM 1728]
gi|12230580|sp|P57711.1|RS28_THEAC RecName: Full=30S ribosomal protein S28e
gi|10640428|emb|CAC12242.1| probable 30S ribosomal protein S28 [Thermoplasma acidophilum]
Length = 69
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 6 PKKAT---VIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESER 60
P +AT V+++IGRTG G+ T V+V+ + D R I RNV GPVRVGDIL L+E+ R
Sbjct: 2 PNEATPAEVVEIIGRTGMTGEATTVKVRVLAGRDQGRIIARNVLGPVRVGDILMLMETAR 61
Query: 61 EARRL 65
EA++L
Sbjct: 62 EAKKL 66
>gi|307354240|ref|YP_003895291.1| 30S ribosomal protein S28e [Methanoplanus petrolearius DSM 11571]
gi|307157473|gb|ADN36853.1| Ribosomal protein S28e [Methanoplanus petrolearius DSM 11571]
Length = 68
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIG TG G+ QV+ + +D + R ITRN GP+R GD+L LLE+EREA++L
Sbjct: 7 AEVIEVIGSTGMHGEAQQVKCRILDGSNKGRIITRNTVGPIREGDVLMLLETEREAKKL 65
>gi|11498371|ref|NP_069599.1| 30S ribosomal protein S28e [Archaeoglobus fulgidus DSM 4304]
gi|6647804|sp|O29493.1|RS28_ARCFU RecName: Full=30S ribosomal protein S28e
gi|2649841|gb|AAB90467.1| SSU ribosomal protein S28E (rps28E) [Archaeoglobus fulgidus DSM
4304]
Length = 71
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+VTQV+V+ + ++ R ITRNV GPV+VGDI+ + E+ REAR+L
Sbjct: 10 AEVVELVGRTGMHGEVTQVKVRVLAGENKGRVITRNVFGPVKVGDIIMIKETAREARKL 68
>gi|397779847|ref|YP_006544320.1| 30S ribosomal protein S28e [Methanoculleus bourgensis MS2]
gi|396938349|emb|CCJ35604.1| 30S ribosomal protein S28e [Methanoculleus bourgensis MS2]
Length = 69
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIG TG G+ QV+ + +D + R ITRN GP+R GDIL+LLE+EREA++L
Sbjct: 8 AEVIEVIGLTGMHGEAQQVKCRVLDGPNKGRIITRNTVGPIREGDILSLLETEREAKKL 66
>gi|126178670|ref|YP_001046635.1| 30S ribosomal protein S28 [Methanoculleus marisnigri JR1]
gi|125861464|gb|ABN56653.1| SSU ribosomal protein S28E [Methanoculleus marisnigri JR1]
Length = 69
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++IG TG G+ QV+ + +D + R ITRN GP+R GDIL+LLE+EREA++L
Sbjct: 8 AEVIEIIGMTGMHGEAQQVKCRVLDGPNKGRIITRNTVGPIREGDILSLLETEREAKKL 66
>gi|390961898|ref|YP_006425732.1| 30S ribosomal protein S28e [Thermococcus sp. CL1]
gi|390520206|gb|AFL95938.1| 30S ribosomal protein S28e [Thermococcus sp. CL1]
Length = 70
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
D G P A VI+++ R G G VTQV+V+ ++ D R I RN+KGPVRVGDI+ L E+E
Sbjct: 3 DEGYP--AEVIEIVARAGVTGGVTQVKVRVLEGRDKGRVIRRNIKGPVRVGDIVILRETE 60
Query: 60 REARRLR 66
REAR ++
Sbjct: 61 REAREIK 67
>gi|258564444|ref|XP_002582967.1| predicted protein [Uncinocarpus reesii 1704]
gi|237908474|gb|EEP82875.1| predicted protein [Uncinocarpus reesii 1704]
Length = 51
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 1 MDTGGP---KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP 46
MD G K A V V+GRTGSRG VTQVRV+FMDD+ R I RNVKGP
Sbjct: 1 MDAAGKVPIKYAKVTSVLGRTGSRGGVTQVRVEFMDDSHRSIIRNVKGP 49
>gi|134045999|ref|YP_001097485.1| 30S ribosomal protein S28e [Methanococcus maripaludis C5]
gi|166225226|sp|A4FYI6.1|RS28_METM5 RecName: Full=30S ribosomal protein S28e
gi|132663624|gb|ABO35270.1| SSU ribosomal protein S28E [Methanococcus maripaludis C5]
Length = 76
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++ GRTG G++ QVR + + DT R +TRNVKGPV++GD++ L E+EREA++L
Sbjct: 13 AEVIQINGRTGVTGEIFQVRCKILGGKDTGRILTRNVKGPVKLGDLIMLRETEREAKQL 71
>gi|161899601|ref|XP_001713026.1| ribosomal protein S28 [Bigelowiella natans]
gi|75756521|gb|ABA27414.1| ribosomal protein S28 [Bigelowiella natans]
Length = 65
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
V K++ + G RGQ TQVRV+ + + K+ + RN+KGPVR+GDI+ L ESEREA
Sbjct: 13 VTKILKKVGKRGQGTQVRVKSITNIKKTLIRNIKGPVRIGDIVLLKESEREA 64
>gi|335287723|ref|XP_003355427.1| PREDICTED: 40S ribosomal protein S28-like [Sus scrofa]
Length = 62
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
A V KV+GRTGS+GQ TQV ++F DT I RN+K P R G +LTLLESE
Sbjct: 12 ARVTKVLGRTGSQGQCTQVCIEFRGDTSHYIIRNMKDPGRQGGVLTLLESE 62
>gi|291333179|gb|ADD92890.1| ribosomal protein S28e [uncultured archaeon MedDCM-OCT-S02-C115]
Length = 74
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESE 59
G A V++V+GRTG G+ TQV+V+ D D R ITRNV GPVR+GDIL L ++
Sbjct: 6 GGWPAEVVEVVGRTGMTGEATQVKVRVNDAPNPRDVGRIITRNVLGPVRLGDILMLRDTG 65
Query: 60 REARRL 65
REAR+L
Sbjct: 66 REARKL 71
>gi|88602874|ref|YP_503052.1| 30S ribosomal protein S28 [Methanospirillum hungatei JF-1]
gi|88188336|gb|ABD41333.1| SSU ribosomal protein S28E [Methanospirillum hungatei JF-1]
Length = 67
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+VIG TG G+ QV+ + +D + R ITRN GP+R GD+L LLE+EREA++L
Sbjct: 6 AEVIEVIGSTGMHGEAMQVKARILDGPNKGRIITRNTVGPIREGDVLMLLETEREAKKL 64
>gi|257077049|ref|ZP_05571410.1| 30S ribosomal protein S28e [Ferroplasma acidarmanus fer1]
Length = 69
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+ T V+V+ +D D R I RNV GPV+VGDIL L E+ REARRL
Sbjct: 8 AEVVELMGRTGMTGEATTVKVRVLDGKDQGRIIARNVLGPVKVGDILMLRETAREARRL 66
>gi|85014367|ref|XP_955679.1| 40S ribosomal protein S28 [Encephalitozoon cuniculi GB-M1]
gi|19171373|emb|CAD27098.1| 40S RIBOSOMAL PROTEIN S28 [Encephalitozoon cuniculi GB-M1]
gi|449330277|gb|AGE96537.1| 40S ribosomal protein S28 [Encephalitozoon cuniculi]
Length = 65
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V V+GRTG G +TQV+++ M + KR I R VKGPV VGDI+ +LE ERE RR R
Sbjct: 11 VTHVLGRTGGSGLLTQVKMELMHN-KRTIQRAVKGPVAVGDIIEILECEREHRRTR 65
>gi|150403579|ref|YP_001330873.1| 30S ribosomal protein S28e [Methanococcus maripaludis C7]
gi|159904640|ref|YP_001548302.1| 30S ribosomal protein S28e [Methanococcus maripaludis C6]
gi|166225227|sp|A6VJU6.1|RS28_METM7 RecName: Full=30S ribosomal protein S28e
gi|238686932|sp|A9A7E6.1|RS28_METM6 RecName: Full=30S ribosomal protein S28e
gi|150034609|gb|ABR66722.1| Ribosomal protein S28e [Methanococcus maripaludis C7]
gi|159886133|gb|ABX01070.1| Ribosomal protein S28e [Methanococcus maripaludis C6]
Length = 76
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI++ GRTG G++ QVR + + DT R +TRNVKGPV++GD + L E+EREA++L
Sbjct: 13 AEVIQINGRTGVTGEIFQVRCKILGGKDTGRILTRNVKGPVKLGDFIMLRETEREAKQL 71
>gi|383320328|ref|YP_005381169.1| 30S ribosomal protein S28E [Methanocella conradii HZ254]
gi|379321698|gb|AFD00651.1| SSU ribosomal protein S28E [Methanocella conradii HZ254]
Length = 73
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESE 59
+TG P A VI++IG TG G+ Q++ + ++ T R ITRN GPVR+GD+L L+E+
Sbjct: 7 ETGVP--AEVIEIIGVTGMHGEAVQIKCKILEGTNKGRIITRNTIGPVRLGDVLILMETA 64
Query: 60 REARRL 65
REA++L
Sbjct: 65 REAKKL 70
>gi|395645991|ref|ZP_10433851.1| 30S ribosomal protein S28e [Methanofollis liminatans DSM 4140]
gi|395442731|gb|EJG07488.1| 30S ribosomal protein S28e [Methanofollis liminatans DSM 4140]
Length = 68
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLES 58
M G P A VI+VIG TG G+ QV+ + ++ R ITRN GP+R GDIL LLE+
Sbjct: 1 MADGTP--AEVIEVIGSTGMHGEAMQVKCRVLEGNNKGRIITRNTVGPIREGDILMLLET 58
Query: 59 EREARRL 65
EREA++L
Sbjct: 59 EREAKKL 65
>gi|329765894|ref|ZP_08257459.1| 30S ribosomal protein S28e [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|340344093|ref|ZP_08667225.1| Ribosomal protein S28e [Candidatus Nitrosoarchaeum koreensis MY1]
gi|393795322|ref|ZP_10378686.1| 30S ribosomal protein S28e [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137600|gb|EGG41871.1| 30S ribosomal protein S28e [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|339519234|gb|EGP92957.1| Ribosomal protein S28e [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 70
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
++ +I+++GRTG G+V QVRV+ + D R +TRNVKG VR+G+IL L E+EREA+++
Sbjct: 10 QSEIIQIVGRTGIAGEVIQVRVKVLSGKDKGRILTRNVKGSVRIGEILMLRETEREAKKI 69
Query: 66 R 66
Sbjct: 70 H 70
>gi|312136676|ref|YP_004004013.1| 30S ribosomal protein S28e [Methanothermus fervidus DSM 2088]
gi|311224395|gb|ADP77251.1| SSU ribosomal protein S28E [Methanothermus fervidus DSM 2088]
Length = 73
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI+V+GRTG G+V QV+ + ++ D R +TRNV GPVR GDIL LL++ REAR ++
Sbjct: 12 AEVIEVVGRTGMTGEVIQVKCRILEGRDKGRILTRNVMGPVREGDILMLLDTIREAREIK 71
>gi|432331880|ref|YP_007250023.1| ribosomal protein S28E/S33 [Methanoregula formicicum SMSP]
gi|432138589|gb|AGB03516.1| ribosomal protein S28E/S33 [Methanoregula formicicum SMSP]
Length = 69
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+V+G TG G+ QV+ + +D R ITRN GP+R GDI+ LLE+EREA++L
Sbjct: 8 AEVIEVVGSTGMHGEAMQVKCRILDGNNKGRIITRNTVGPIREGDIIMLLETEREAKKL 66
>gi|336477189|ref|YP_004616330.1| 30S ribosomal protein S28e [Methanosalsum zhilinae DSM 4017]
gi|335930570|gb|AEH61111.1| Ribosomal protein S28e [Methanosalsum zhilinae DSM 4017]
Length = 71
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI VIG TG G+ +Q++ + ++ D R ITRN GPVR+GD+ LLE+ REA++L
Sbjct: 10 AEVIDVIGNTGMHGEASQIQCRVLEGRDKGRIITRNCVGPVRIGDVFMLLETSREAKKL 68
>gi|374725213|gb|EHR77293.1| Ribosomal protein S28e [uncultured marine group II euryarchaeote]
Length = 74
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD-----DTKRQITRNVKGPVRVGDILTLLESEREAR 63
A V++++GRTG G+ TQV+V+ D D R I+RNV GP+RVGDIL L ++ REAR
Sbjct: 10 AEVVEIVGRTGMTGEATQVKVRVNDAPNPRDVGRIISRNVLGPIRVGDILMLKDTGREAR 69
Query: 64 RL 65
+L
Sbjct: 70 KL 71
>gi|268325174|emb|CBH38762.1| 30S ribosomal protein S28e [uncultured archaeon]
gi|268326270|emb|CBH39858.1| 30S ribosomal protein S28e [uncultured archaeon]
Length = 70
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+V+GRTG G+ TQ++ + +D + R +TRN GP+RVGD + LLE+ RE R+L
Sbjct: 9 AEVIEVVGRTGMHGESTQIKCKILDGENKGRILTRNCIGPLRVGDYIMLLETAREVRKL 67
>gi|15678284|ref|NP_275399.1| 30S ribosomal protein S28 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6226096|sp|O26356.1|RS28_METTH RecName: Full=30S ribosomal protein S28e
gi|40889138|pdb|1NE3|A Chain A, Solution Structure Of Ribosomal Protein S28e From
Methanobacterium Thermoautotrophicum. Ontario Centre
For Structural Proteomics Target Mth0256_1_68;
Northeast Structural Genomics Target Tt744
gi|2621306|gb|AAB84762.1| ribosomal protein S28 [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 68
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
MD P A VI+V+ RTG G+V QV+ + +D D R +TRNV GP+R GDIL LL++
Sbjct: 1 MDDATP--AEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMGPIREGDILMLLDT 58
Query: 59 EREARRLR 66
REA+ +R
Sbjct: 59 IREAKEIR 66
>gi|330507714|ref|YP_004384142.1| 30S ribosomal protein S28e [Methanosaeta concilii GP6]
gi|328928522|gb|AEB68324.1| ribosomal protein S28e [Methanosaeta concilii GP6]
Length = 70
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESE 59
D G P A VI+VIG TG G+ Q++ + ++ R ITRN GP+R+GD+L LLE+
Sbjct: 4 DNGIP--AEVIEVIGVTGMHGEAMQIKCRILEGNNKGRIITRNSMGPIRIGDVLMLLETA 61
Query: 60 REARRL 65
REA++L
Sbjct: 62 REAKKL 67
>gi|282163710|ref|YP_003356095.1| 30S ribosomal protein S28e [Methanocella paludicola SANAE]
gi|282156024|dbj|BAI61112.1| 30S ribosomal protein S28e [Methanocella paludicola SANAE]
Length = 70
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESE 59
+TG P A VI+VIG TG G+ Q++ + ++ R ITRN GPVR+GDIL L+E+
Sbjct: 4 ETGVP--AEVIEVIGVTGMHGEAVQIKCKILEGNNKGRIITRNSIGPVRLGDILILMETA 61
Query: 60 REARRL 65
REA++L
Sbjct: 62 REAKKL 67
>gi|161527734|ref|YP_001581560.1| 30S ribosomal protein S28e [Nitrosopumilus maritimus SCM1]
gi|407461735|ref|YP_006773052.1| 30S ribosomal protein S28e [Candidatus Nitrosopumilus koreensis
AR1]
gi|160339035|gb|ABX12122.1| Ribosomal protein S28e [Nitrosopumilus maritimus SCM1]
gi|407045357|gb|AFS80110.1| 30S ribosomal protein S28e [Candidatus Nitrosopumilus koreensis
AR1]
Length = 70
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ +I+++GRTG G+V QVRV+ + D R +TRNVKG VR+G+IL L E+EREA++++
Sbjct: 11 SEIIQIVGRTGIAGEVIQVRVKVLTGKDKGRILTRNVKGSVRLGEILMLRETEREAKKIK 70
>gi|386875017|ref|ZP_10117221.1| ribosomal protein S28e [Candidatus Nitrosopumilus salaria BD31]
gi|386807177|gb|EIJ66592.1| ribosomal protein S28e [Candidatus Nitrosopumilus salaria BD31]
Length = 70
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
++ +I+++GRTG G+V QVRV+ + D R +TRNVKG VR+G+IL L E+EREA+++
Sbjct: 10 QSEIIQIVGRTGIAGEVIQVRVKVLTGKDKGRILTRNVKGSVRLGEILMLRETEREAKKI 69
Query: 66 R 66
Sbjct: 70 H 70
>gi|154150232|ref|YP_001403850.1| 30S ribosomal protein S28 [Methanoregula boonei 6A8]
gi|153998784|gb|ABS55207.1| Ribosomal protein S28e [Methanoregula boonei 6A8]
Length = 69
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREARRL 65
A VI+V+G TG G+ QV+ + +D R ITRN GP+R GD++ LLE+EREA++L
Sbjct: 8 AEVIEVVGSTGMHGEAMQVKCRILDGNNKGRIITRNTVGPIREGDVIMLLETEREAKKL 66
>gi|396082070|gb|AFN83682.1| 40S ribosomal protein S28 [Encephalitozoon romaleae SJ-2008]
Length = 65
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V V+GRTG G +TQV+++ M + KR I R VKGPV VGDI+ +LE ERE R+ R
Sbjct: 11 VTHVLGRTGGSGLLTQVKMELMHN-KRTIQRAVKGPVAVGDIIEVLECEREHRKTR 65
>gi|384487282|gb|EIE79462.1| 30S ribosomal protein S28e [Rhizopus delemar RA 99-880]
Length = 35
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 29/35 (82%)
Query: 32 MDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
MDDT R I RNVKGPVR DIL LLESEREARRLR
Sbjct: 1 MDDTNRSIIRNVKGPVRENDILCLLESEREARRLR 35
>gi|91772288|ref|YP_564980.1| 30S ribosomal protein S28e [Methanococcoides burtonii DSM 6242]
gi|91711303|gb|ABE51230.1| SSU ribosomal protein S28E [Methanococcoides burtonii DSM 6242]
Length = 71
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A VI VIG TG G+ +Q++ + ++ D R ITRN GPVR+GD+ L+E+ REA++L
Sbjct: 10 AEVIDVIGNTGMHGEASQIQCRVLEGRDKGRIITRNCVGPVRIGDVFMLMETSREAKKL 68
>gi|350638949|gb|EHA27304.1| hypothetical protein ASPNIDRAFT_191806 [Aspergillus niger ATCC
1015]
Length = 54
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 32/40 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP 46
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGP
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGP 48
>gi|288560745|ref|YP_003424231.1| ribosomal protein S28e Rps28e [Methanobrevibacter ruminantium M1]
gi|288543455|gb|ADC47339.1| ribosomal protein S28e Rps28e [Methanobrevibacter ruminantium M1]
Length = 68
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
M+ G P A VI+V+ RTG G++ QV+ + ++ D R +TRN+ GPVR GDIL LL++
Sbjct: 1 MEEGSP--AEVIEVLHRTGMTGEIMQVKCRILEGRDKGRILTRNIMGPVREGDILMLLDT 58
Query: 59 EREARRLR 66
REA+ +R
Sbjct: 59 IREAKEIR 66
>gi|70987162|ref|XP_749061.1| Ribosomal protein S28e [Aspergillus fumigatus Af293]
gi|66846691|gb|EAL87023.1| Ribosomal protein S28e [Aspergillus fumigatus Af293]
gi|159123168|gb|EDP48288.1| Ribosomal protein S28e [Aspergillus fumigatus A1163]
Length = 56
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 32/40 (80%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP 46
K V +V+GRTGSRG VTQVRV+FMDDT R I RNVKGP
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGP 48
>gi|407464063|ref|YP_006774945.1| 30S ribosomal protein S28e [Candidatus Nitrosopumilus sp. AR2]
gi|407047251|gb|AFS82003.1| 30S ribosomal protein S28e [Candidatus Nitrosopumilus sp. AR2]
Length = 70
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
++ +I+++GRTG G+V QVRV+ + D R +TRNVKG VR G+IL L E+EREA+++
Sbjct: 10 QSEIIQIVGRTGIAGEVIQVRVKVLTGKDKGRILTRNVKGSVRSGEILMLRETEREAKKI 69
Query: 66 R 66
+
Sbjct: 70 K 70
>gi|435851663|ref|YP_007313249.1| ribosomal protein S28E/S33 [Methanomethylovorans hollandica DSM
15978]
gi|433662293|gb|AGB49719.1| ribosomal protein S28E/S33 [Methanomethylovorans hollandica DSM
15978]
Length = 71
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
DTG A VI VIG TG G+ +Q++ + ++ D R ITRN GPVR+GD+ L+E+
Sbjct: 5 DTG--YAAEVIDVIGNTGMHGEASQIQCRVLEGRDKGRIITRNSVGPVRIGDVFMLMETS 62
Query: 60 REARRL 65
REA++L
Sbjct: 63 REAKKL 68
>gi|328872519|gb|EGG20886.1| 40S ribosomal protein S28 [Dictyostelium fasciculatum]
Length = 93
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD-DTKRQITRNVKGPVRVGDILTLL 56
A V +V+ RTGSRG VTQVRV F++ D R + RNVKG VRV DIL LL
Sbjct: 39 AKVTEVLCRTGSRGAVTQVRVDFLNTDKPRSLLRNVKGAVRVNDILCLL 87
>gi|161076831|ref|NP_001097132.1| ribosomal protein S28-like [Drosophila melanogaster]
gi|157400127|gb|ABV53659.1| ribosomal protein S28-like [Drosophila melanogaster]
Length = 76
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIK++ R G+RG +T+VRVQ +D K Q R VKGPVR+GDI+ ++E
Sbjct: 8 KARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDIVDFEDTE 59
>gi|195577831|ref|XP_002078772.1| GD23606 [Drosophila simulans]
gi|194190781|gb|EDX04357.1| GD23606 [Drosophila simulans]
Length = 76
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIK++ R G+RG +T+VRVQ +D K Q R VKGPVR+GDI+ ++E
Sbjct: 8 KARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDIVDFEDTE 59
>gi|297618922|ref|YP_003707027.1| 30S ribosomal protein S28e [Methanococcus voltae A3]
gi|297377899|gb|ADI36054.1| Ribosomal protein S28e [Methanococcus voltae A3]
Length = 76
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A +I+V G+TG G++ QVR + + D R +TRNVKGPV++GDI+ L E+EREA+ L
Sbjct: 13 AEIIQVNGKTGVTGEIFQVRCKILGGKDNGRILTRNVKGPVKLGDIIMLRETEREAKPL 71
>gi|194765523|ref|XP_001964876.1| GF22740 [Drosophila ananassae]
gi|190617486|gb|EDV33010.1| GF22740 [Drosophila ananassae]
Length = 76
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIK++GR G+RG +T+VRVQ ++ K R VKGPVR+GDI+ ++E
Sbjct: 8 KARVIKILGRIGARGILTEVRVQLLEYPKMHFLRTVKGPVRIGDIVDFEDTE 59
>gi|304314467|ref|YP_003849614.1| 30S ribosomal protein S28e [Methanothermobacter marburgensis str.
Marburg]
gi|302587926|gb|ADL58301.1| 30S ribosomal protein S28e [Methanothermobacter marburgensis str.
Marburg]
Length = 68
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI+V+ RTG G+V QV+ + +D D R +TRNV GP+R GDIL LL++ REA+ +R
Sbjct: 7 AEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMGPIREGDILMLLDTIREAKEIR 66
>gi|194859000|ref|XP_001969302.1| GG25351 [Drosophila erecta]
gi|190661169|gb|EDV58361.1| GG25351 [Drosophila erecta]
Length = 76
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIK++ R G+RG +T+VRVQ +D K Q R VKGPVR+GDI+ ++E
Sbjct: 8 KARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDIVDFEDTE 59
>gi|147921698|ref|YP_684482.1| 30S ribosomal protein S28e [Methanocella arvoryzae MRE50]
gi|110619878|emb|CAJ35156.1| 30S ribosomal protein S28E [Methanocella arvoryzae MRE50]
Length = 70
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESE 59
+TG P A VI++IG TG G+ QV+ + ++ + R ITRN GP+R+GDI+ L+E+
Sbjct: 4 ETGVP--AEVIEIIGVTGMHGEAVQVKCKILEGSNKGRIITRNTVGPIRLGDIVILMETA 61
Query: 60 REARRL 65
REA+++
Sbjct: 62 REAKKM 67
>gi|281208042|gb|EFA82220.1| Coatamer protein [Polysphondylium pallidum PN500]
Length = 932
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK-RQITRNVKGPVRVGDILTLLE 57
A V +VI RTGSRG VTQVRV+F++ K R + RNVKG VR+ DIL LL+
Sbjct: 296 ARVTEVICRTGSRGAVTQVRVEFLNTEKPRSLLRNVKGAVRLNDILCLLK 345
>gi|59803150|gb|AAX07725.1| 40S ribosomal protein S28-like protein [Magnaporthe grisea]
Length = 85
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 6/64 (9%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP--VRVGDI-LTL---LESER 60
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGP R+ DI L+L L+ R
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGPGNERLLDIPLSLAHKLQPNR 68
Query: 61 EARR 64
A R
Sbjct: 69 PAPR 72
>gi|401828605|ref|XP_003888016.1| 40S ribosomal protein S28 [Encephalitozoon hellem ATCC 50504]
gi|392999024|gb|AFM99035.1| 40S ribosomal protein S28 [Encephalitozoon hellem ATCC 50504]
Length = 65
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V V+ RTG G +TQV+++ M + KR I R +KGPV VGDI+ +LE ERE R+ R
Sbjct: 11 VTHVLARTGGSGLLTQVKMELMHN-KRTIQRAIKGPVAVGDIIEILECEREHRKTR 65
>gi|354610832|ref|ZP_09028788.1| 30S ribosomal protein S28e [Halobacterium sp. DL1]
gi|353195652|gb|EHB61154.1| 30S ribosomal protein S28e [Halobacterium sp. DL1]
Length = 74
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+G+TG G+ QV R+Q + R ITRNV GPVRVGD+L L E+ REA
Sbjct: 9 GATPAEVIEVVGKTGMHGEAMQVKCRIQEGSNQGRIITRNVLGPVRVGDVLQLKETAREA 68
>gi|160948240|emb|CAO94721.1| putative ribosomal protein S28 [Pomphorhynchus laevis]
Length = 67
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQ--ITRNVKGPVRVGDIL 53
ATV +++GRTGS+GQ TQV V FM D +Q + RNVKGPVR GDIL
Sbjct: 8 ATVEQILGRTGSQGQCTQVIVSFMGDGDQQGTLCRNVKGPVREGDIL 54
>gi|448409437|ref|ZP_21574735.1| 30S ribosomal protein S28e [Halosimplex carlsbadense 2-9-1]
gi|445673040|gb|ELZ25607.1| 30S ribosomal protein S28e [Halosimplex carlsbadense 2-9-1]
Length = 76
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 TGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
GG A VI+V+GRTG G+ QV R++ ++ R ITRNV GPVR GD+L L E+ R
Sbjct: 9 NGGSTAAEVIEVVGRTGMHGEAMQVKCRIRGGENQGRIITRNVLGPVREGDVLQLRETAR 68
Query: 61 EARRL 65
EA ++
Sbjct: 69 EADQI 73
>gi|48478353|ref|YP_024059.1| 30S ribosomal protein S28e [Picrophilus torridus DSM 9790]
gi|73917997|sp|Q6KZI6.1|RS28_PICTO RecName: Full=30S ribosomal protein S28e
gi|48431001|gb|AAT43866.1| small subunit ribosomal protein S28E [Picrophilus torridus DSM
9790]
Length = 69
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRL 65
A V++++GRTG G+ T V+V+ + D R I RNV GPV+VGD+L L E+ REAR+L
Sbjct: 8 AEVVEIMGRTGMTGEATTVKVRVLSGKDQGRIIARNVLGPVKVGDVLMLRETAREARKL 66
>gi|195473289|ref|XP_002088928.1| GE18842 [Drosophila yakuba]
gi|194175029|gb|EDW88640.1| GE18842 [Drosophila yakuba]
Length = 76
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIK++ R G+RG +T+VRVQ +D K Q R VKGPV +GDI+ ++E
Sbjct: 8 KARVIKILNRIGARGILTEVRVQLIDQPKMQFMRTVKGPVHLGDIVDFEDTE 59
>gi|76802467|ref|YP_327475.1| 30S ribosomal protein S28e [Natronomonas pharaonis DSM 2160]
gi|121724373|sp|Q3IPM8.1|RS28_NATPD RecName: Full=30S ribosomal protein S28e
gi|76558332|emb|CAI49922.1| 30S ribosomal protein S28e [Natronomonas pharaonis DSM 2160]
Length = 75
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ GG A VI+V+G TG G+ QV R+Q ++ R I RNV GPVRVGD++ L E+
Sbjct: 7 EEGGATPAEVIEVVGETGMHGEAMQVKCRIQEGENQGRIIARNVLGPVRVGDVIQLRETA 66
Query: 60 REA 62
REA
Sbjct: 67 REA 69
>gi|195339453|ref|XP_002036334.1| GM17455 [Drosophila sechellia]
gi|194130214|gb|EDW52257.1| GM17455 [Drosophila sechellia]
Length = 76
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIK++ R G++G +T+VRVQ +D K Q R VKGPVR+GDI+ ++E
Sbjct: 8 KARVIKILNRIGAQGILTEVRVQLVDQPKMQFMRTVKGPVRLGDIVDFEDTE 59
>gi|322709653|gb|EFZ01229.1| 40S ribosomal protein S28 [Metarhizium anisopliae ARSEF 23]
Length = 66
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP 46
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGP
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGP 48
>gi|148642265|ref|YP_001272778.1| 30S ribosomal protein S28e [Methanobrevibacter smithii ATCC
35061]
gi|222444562|ref|ZP_03607077.1| hypothetical protein METSMIALI_00174 [Methanobrevibacter smithii
DSM 2375]
gi|261350898|ref|ZP_05976315.1| ribosomal protein S28e [Methanobrevibacter smithii DSM 2374]
gi|148551282|gb|ABQ86410.1| ribosomal protein S28e [Methanobrevibacter smithii ATCC 35061]
gi|222434127|gb|EEE41292.1| ribosomal protein S28e [Methanobrevibacter smithii DSM 2375]
gi|288860236|gb|EFC92534.1| ribosomal protein S28e [Methanobrevibacter smithii DSM 2374]
Length = 68
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI V+ RTG G+V Q++ + +D D R +TRN+ GPVR GDIL LL++ REA+ ++
Sbjct: 7 AEVINVLKRTGMTGEVMQIKCRILDGRDKGRILTRNIMGPVREGDILMLLDTIREAKEIK 66
>gi|322701401|gb|EFY93151.1| 40S ribosomal protein S28 [Metarhizium acridum CQMa 102]
Length = 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP 46
K V +V+GRTGSRG VTQVRV+FMDD R I RNVKGP
Sbjct: 9 KLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGP 48
>gi|124027431|ref|YP_001012751.1| 30S ribosomal protein S28e [Hyperthermus butylicus DSM 5456]
gi|254764448|sp|A2BK95.1|RS28_HYPBU RecName: Full=30S ribosomal protein S28e
gi|123978125|gb|ABM80406.1| 30S ribosomal protein S28e [Hyperthermus butylicus DSM 5456]
Length = 81
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESE 59
+ G P A VI++IGRTG G+V QVRV+ ++ D R +TRNV GPVR+GDI+ L E+E
Sbjct: 14 EIGYP--AEVIQIIGRTGVHGEVIQVRVRVLEGRDKGRVLTRNVLGPVRLGDIVILRETE 71
>gi|325958367|ref|YP_004289833.1| 30S ribosomal protein S28e [Methanobacterium sp. AL-21]
gi|325329799|gb|ADZ08861.1| 30S ribosomal protein S28e [Methanobacterium sp. AL-21]
Length = 68
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
M+ G P A +I+V+ RTG G+V QV+ + +D D R +TRNV G +R GDIL LL++
Sbjct: 1 MEDGTP--AEIIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMGAIREGDILMLLDT 58
Query: 59 EREARRLR 66
REA+ +R
Sbjct: 59 IREAKEIR 66
>gi|222480254|ref|YP_002566491.1| 30S ribosomal protein S28e [Halorubrum lacusprofundi ATCC 49239]
gi|448440180|ref|ZP_21588428.1| 30S ribosomal protein S28e [Halorubrum saccharovorum DSM 1137]
gi|448460467|ref|ZP_21597292.1| 30S ribosomal protein S28e [Halorubrum lipolyticum DSM 21995]
gi|448465436|ref|ZP_21598846.1| 30S ribosomal protein S28e [Halorubrum kocurii JCM 14978]
gi|448474515|ref|ZP_21602374.1| 30S ribosomal protein S28e [Halorubrum aidingense JCM 13560]
gi|254764447|sp|B9LPY3.1|RS28_HALLT RecName: Full=30S ribosomal protein S28e
gi|222453156|gb|ACM57421.1| Ribosomal protein S28e [Halorubrum lacusprofundi ATCC 49239]
gi|445690697|gb|ELZ42907.1| 30S ribosomal protein S28e [Halorubrum saccharovorum DSM 1137]
gi|445807208|gb|EMA57294.1| 30S ribosomal protein S28e [Halorubrum lipolyticum DSM 21995]
gi|445815027|gb|EMA64970.1| 30S ribosomal protein S28e [Halorubrum kocurii JCM 14978]
gi|445817822|gb|EMA67691.1| 30S ribosomal protein S28e [Halorubrum aidingense JCM 13560]
Length = 74
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 3 TGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
TG A VI+V+G+TG G+ QV R+Q + R ITRNV GPVR+GD+L L E++R
Sbjct: 7 TGDSTTAEVIEVVGKTGMHGEAMQVKCRIQEGSNQGRIITRNVLGPVRMGDVLQLRETQR 66
Query: 61 EA 62
+A
Sbjct: 67 DA 68
>gi|448425503|ref|ZP_21582833.1| 30S ribosomal protein S28e [Halorubrum terrestre JCM 10247]
gi|448431313|ref|ZP_21585018.1| 30S ribosomal protein S28e [Halorubrum tebenquichense DSM 14210]
gi|448453172|ref|ZP_21593696.1| 30S ribosomal protein S28e [Halorubrum litoreum JCM 13561]
gi|448485325|ref|ZP_21606586.1| 30S ribosomal protein S28e [Halorubrum arcis JCM 13916]
gi|448496076|ref|ZP_21610253.1| 30S ribosomal protein S28e [Halorubrum californiensis DSM 19288]
gi|448499512|ref|ZP_21611362.1| 30S ribosomal protein S28e [Halorubrum coriense DSM 10284]
gi|448504734|ref|ZP_21614075.1| 30S ribosomal protein S28e [Halorubrum distributum JCM 9100]
gi|448518856|ref|ZP_21617807.1| 30S ribosomal protein S28e [Halorubrum distributum JCM 10118]
gi|448534237|ref|ZP_21621617.1| 30S ribosomal protein S28e [Halorubrum hochstenium ATCC 700873]
gi|445680574|gb|ELZ33017.1| 30S ribosomal protein S28e [Halorubrum terrestre JCM 10247]
gi|445687362|gb|ELZ39652.1| 30S ribosomal protein S28e [Halorubrum californiensis DSM 19288]
gi|445687908|gb|ELZ40181.1| 30S ribosomal protein S28e [Halorubrum tebenquichense DSM 14210]
gi|445697300|gb|ELZ49366.1| 30S ribosomal protein S28e [Halorubrum coriense DSM 10284]
gi|445701944|gb|ELZ53916.1| 30S ribosomal protein S28e [Halorubrum distributum JCM 9100]
gi|445704485|gb|ELZ56400.1| 30S ribosomal protein S28e [Halorubrum distributum JCM 10118]
gi|445704926|gb|ELZ56831.1| 30S ribosomal protein S28e [Halorubrum hochstenium ATCC 700873]
gi|445807929|gb|EMA58008.1| 30S ribosomal protein S28e [Halorubrum litoreum JCM 13561]
gi|445818215|gb|EMA68077.1| 30S ribosomal protein S28e [Halorubrum arcis JCM 13916]
Length = 74
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 3 TGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
TG A VI+V+G+TG G+ QV R+Q + R ITRNV GPVR+GD+L L E++R
Sbjct: 7 TGDSTTAEVIEVVGKTGMHGEAMQVKCRIQEGSNQGRIITRNVLGPVRLGDVLQLRETQR 66
Query: 61 EA 62
+A
Sbjct: 67 DA 68
>gi|161349981|ref|NP_280058.2| 30S ribosomal protein S28 [Halobacterium sp. NRC-1]
gi|169235963|ref|YP_001689163.1| 30S ribosomal protein S28e [Halobacterium salinarum R1]
gi|12230579|sp|P57710.1|RS28_HALSA RecName: Full=30S ribosomal protein S28e
gi|229564242|sp|B0R500.1|RS28_HALS3 RecName: Full=30S ribosomal protein S28e
gi|11071685|dbj|BAB17306.1| SSU ribosomal protein S28E [Halobacterium salinarum]
gi|167727029|emb|CAP13815.1| 30S ribosomal protein S28e [Halobacterium salinarum R1]
Length = 74
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+G+TG G+ QV R+Q + R ITRNV GPVRVGD++ L E+ REA
Sbjct: 9 GATPAEVIEVVGKTGMHGEAMQVKCRIQEGGNQGRIITRNVLGPVRVGDVIQLKETAREA 68
>gi|125660154|gb|ABN49305.1| IP17744p [Drosophila melanogaster]
Length = 73
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDI 52
KA VIK++ R G+RG +T+VRVQ +D K Q R VKGPVR+GD+
Sbjct: 6 KARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50
>gi|433638704|ref|YP_007284464.1| ribosomal protein S28E/S33 [Halovivax ruber XH-70]
gi|448378244|ref|ZP_21560718.1| 30S ribosomal protein S28e [Halovivax asiaticus JCM 14624]
gi|433290508|gb|AGB16331.1| ribosomal protein S28E/S33 [Halovivax ruber XH-70]
gi|445654226|gb|ELZ07080.1| 30S ribosomal protein S28e [Halovivax asiaticus JCM 14624]
Length = 74
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
D G A VI+++G+TG G+ QV R+Q ++ R ITRN GPVR GD+L L E+
Sbjct: 6 DESGSTPAEVIEIVGKTGMHGEAMQVKCRIQEGENQGRIITRNCLGPVREGDVLQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|290559375|gb|EFD92708.1| Ribosomal protein S28e [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 86
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ VI+++GR G G+VTQVR + + D + I RNV+GPV VGDIL L E+E EA ++R
Sbjct: 27 SEVIEIVGRHGVAGEVTQVRCKVLAGMDKDKIIRRNVRGPVVVGDILMLKETEMEAMQIR 86
>gi|345005373|ref|YP_004808226.1| 30S ribosomal protein S28e [halophilic archaeon DL31]
gi|344320999|gb|AEN05853.1| 30S ribosomal protein S28e [halophilic archaeon DL31]
Length = 75
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 4 GGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESERE 61
G A VI+++G+TG G+ QV RVQ D R ITRNV GPVR GDIL L E++R+
Sbjct: 9 GDSTPAEVIEIVGKTGMHGEAMQVKCRVQDGSDQGRIITRNVLGPVREGDILQLRETQRD 68
Query: 62 ARRL 65
A +
Sbjct: 69 ADSI 72
>gi|195397929|ref|XP_002057580.1| GJ18205 [Drosophila virilis]
gi|194141234|gb|EDW57653.1| GJ18205 [Drosophila virilis]
Length = 65
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
A V+KV+GR G+RG +T VRV+ + + Q+ R+VKGPVR+GDI+ + E+ + R
Sbjct: 8 ARVVKVLGRVGARGLLTAVRVELLKFPRIQMLRSVKGPVRLGDIIHIEEALEDVWR 63
>gi|84489441|ref|YP_447673.1| 30S ribosomal protein S28e [Methanosphaera stadtmanae DSM 3091]
gi|84372760|gb|ABC57030.1| 30S ribosomal protein S28e [Methanosphaera stadtmanae DSM 3091]
Length = 68
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
M+ G P A VI+V+ RTG G+V QV+ + +D D R +TRNV G ++ GD+L LL++
Sbjct: 1 MEDGTP--AEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMGAIKEGDVLMLLDT 58
Query: 59 EREARRLR 66
REA+ +R
Sbjct: 59 IREAKEIR 66
>gi|242398411|ref|YP_002993835.1| 30S ribosomal protein S28e [Thermococcus sibiricus MM 739]
gi|242264804|gb|ACS89486.1| 30S ribosomal protein S28e [Thermococcus sibiricus MM 739]
Length = 70
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
D G P A VI+++GRTG G+VTQV+V+ ++ D R I RN+KGPVR+GDI+ L E+
Sbjct: 3 DEGYP--AEVIEIVGRTGVTGEVTQVKVRVLEGMDKGRVIRRNIKGPVRLGDIVILRET 59
>gi|333987957|ref|YP_004520564.1| 30S ribosomal protein S28e [Methanobacterium sp. SWAN-1]
gi|333826101|gb|AEG18763.1| 30S ribosomal protein S28e [Methanobacterium sp. SWAN-1]
Length = 68
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 4 GGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESERE 61
G A VI+V+ RTG G+V QV+ + +D D R +TRNV G +R GD+L LL++ RE
Sbjct: 2 GEATPAEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMGAIREGDVLMLLDTIRE 61
Query: 62 ARRLR 66
A+ +R
Sbjct: 62 AKEIR 66
>gi|452207464|ref|YP_007487586.1| 30S ribosomal protein S28e [Natronomonas moolapensis 8.8.11]
gi|452083564|emb|CCQ36876.1| 30S ribosomal protein S28e [Natronomonas moolapensis 8.8.11]
Length = 74
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+G+TG G+ QV R++ ++ R I RNV GPVRVGD+L L E+ REA
Sbjct: 9 GATPAEVIEVVGKTGMHGEAMQVKCRIKEGENQGRIIARNVLGPVRVGDVLQLRETAREA 68
>gi|435847121|ref|YP_007309371.1| ribosomal protein S28E/S33 [Natronococcus occultus SP4]
gi|448317536|ref|ZP_21507087.1| 30S ribosomal protein S28e [Natronococcus jeotgali DSM 18795]
gi|448322452|ref|ZP_21511922.1| 30S ribosomal protein S28e [Natronococcus amylolyticus DSM 10524]
gi|433673389|gb|AGB37581.1| ribosomal protein S28E/S33 [Natronococcus occultus SP4]
gi|445601210|gb|ELY55199.1| 30S ribosomal protein S28e [Natronococcus amylolyticus DSM 10524]
gi|445603259|gb|ELY57226.1| 30S ribosomal protein S28e [Natronococcus jeotgali DSM 18795]
Length = 74
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+G+TG G+ QV R+Q ++ R ITRN GPVR GD+L L E+ REA
Sbjct: 9 GSTPAEVIEVVGKTGMHGEAMQVKCRIQEGENQGRIITRNCLGPVREGDVLQLRETAREA 68
>gi|303390803|ref|XP_003073632.1| 40S ribosomal protein S28 [Encephalitozoon intestinalis ATCC
50506]
gi|303302779|gb|ADM12272.1| 40S ribosomal protein S28 [Encephalitozoon intestinalis ATCC
50506]
Length = 65
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V +V+GRTG G +TQV+++ + + KR I R +KGP+ GD + +LE ERE RR R
Sbjct: 11 VTQVLGRTGGSGLLTQVKMELIHN-KRMIQRAIKGPISEGDFVEILECEREHRRTR 65
>gi|257388662|ref|YP_003178435.1| 30S ribosomal protein S28e [Halomicrobium mukohataei DSM 12286]
gi|257170969|gb|ACV48728.1| Ribosomal protein S28e [Halomicrobium mukohataei DSM 12286]
Length = 75
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+GRTG G+ QV+ + + + R ITRNV GPVR GD+L L E+ REA
Sbjct: 10 GSTPAEVIEVVGRTGMHGEAMQVKCRIREGSNQGRIITRNVLGPVREGDVLQLRETAREA 69
Query: 63 RRL 65
++
Sbjct: 70 DQI 72
>gi|212224102|ref|YP_002307338.1| 30S ribosomal protein S28e [Thermococcus onnurineus NA1]
gi|212009059|gb|ACJ16441.1| SSU ribosomal protein S28E [Thermococcus onnurineus NA1]
Length = 70
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLES 58
D G P A VI+++GRTG G VTQV+V+ ++ D R I RN+KGPVRVGDI+ L E+
Sbjct: 3 DEGYP--AEVIEIVGRTGVTGGVTQVKVRVLEGRDKGRVIRRNIKGPVRVGDIVILRET 59
>gi|289580136|ref|YP_003478602.1| 30S ribosomal protein S28e [Natrialba magadii ATCC 43099]
gi|336252127|ref|YP_004595234.1| 30S ribosomal protein S28e [Halopiger xanaduensis SH-6]
gi|448281376|ref|ZP_21472682.1| 30S ribosomal protein S28e [Natrialba magadii ATCC 43099]
gi|448352755|ref|ZP_21541536.1| 30S ribosomal protein S28e [Natrialba hulunbeirensis JCM 10989]
gi|448358741|ref|ZP_21547418.1| 30S ribosomal protein S28e [Natrialba chahannaoensis JCM 10990]
gi|289529689|gb|ADD04040.1| Ribosomal protein S28e [Natrialba magadii ATCC 43099]
gi|335336116|gb|AEH35355.1| Ribosomal protein S28e [Halopiger xanaduensis SH-6]
gi|445578798|gb|ELY33198.1| 30S ribosomal protein S28e [Natrialba magadii ATCC 43099]
gi|445642034|gb|ELY95105.1| 30S ribosomal protein S28e [Natrialba hulunbeirensis JCM 10989]
gi|445645323|gb|ELY98329.1| 30S ribosomal protein S28e [Natrialba chahannaoensis JCM 10990]
Length = 74
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ G A VI+++G+TG G+ QV R+Q ++ R ITRN GPVR GD+L L E+
Sbjct: 6 EESGSTPAEVIEIVGKTGMHGEAMQVKCRIQEGENQGRIITRNCLGPVREGDVLQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|195156321|ref|XP_002019049.1| GL26153 [Drosophila persimilis]
gi|198476045|ref|XP_002132245.1| GA25627 [Drosophila pseudoobscura pseudoobscura]
gi|194115202|gb|EDW37245.1| GL26153 [Drosophila persimilis]
gi|198137521|gb|EDY69647.1| GA25627 [Drosophila pseudoobscura pseudoobscura]
Length = 66
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESERE 61
P K VIK++GR G+RG T+VRVQ + + Q + VKGPV +GD++ + +S+ E
Sbjct: 5 PTKGRVIKILGRIGARGYQTEVRVQLLSYPRIQFLQKVKGPVHLGDVVNVEDSKLE 60
>gi|284165797|ref|YP_003404076.1| 30S ribosomal protein S28e [Haloterrigena turkmenica DSM 5511]
gi|448391718|ref|ZP_21566813.1| 30S ribosomal protein S28e [Haloterrigena salina JCM 13891]
gi|284015452|gb|ADB61403.1| Ribosomal protein S28e [Haloterrigena turkmenica DSM 5511]
gi|445665130|gb|ELZ17808.1| 30S ribosomal protein S28e [Haloterrigena salina JCM 13891]
Length = 74
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+++G+TG G+ QV R+Q ++ R ITRN GPVR GD+L L E+ REA
Sbjct: 9 GSTPAEVIEIVGKTGMHGEAMQVKCRIQEGENQGRIITRNCLGPVREGDVLQLRETAREA 68
>gi|57641245|ref|YP_183723.1| 30S ribosomal protein S28e [Thermococcus kodakarensis KOD1]
gi|73917998|sp|Q5JGR4.1|RS28_PYRKO RecName: Full=30S ribosomal protein S28e
gi|57159569|dbj|BAD85499.1| SSU ribosomal protein S28E [Thermococcus kodakarensis KOD1]
Length = 70
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTL 55
D G P A VI+++GRTG G VTQV+V+ ++ D R I RNVKGPVRVGDI+ L
Sbjct: 3 DEGYP--AEVIEIVGRTGVTGGVTQVKVRILEGRDKGRVIRRNVKGPVRVGDIVIL 56
>gi|448578408|ref|ZP_21643843.1| 30S ribosomal protein S28e [Haloferax larsenii JCM 13917]
gi|448592521|ref|ZP_21651628.1| 30S ribosomal protein S28e [Haloferax elongans ATCC BAA-1513]
gi|445726949|gb|ELZ78565.1| 30S ribosomal protein S28e [Haloferax larsenii JCM 13917]
gi|445731526|gb|ELZ83110.1| 30S ribosomal protein S28e [Haloferax elongans ATCC BAA-1513]
Length = 74
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV R+Q + R ITRNV GPVR GDIL L E++R+A
Sbjct: 12 SAEVIEVVGKTGMHGEAMQVKCRIQEGSNKGRIITRNVLGPVREGDILQLRETQRDA 68
>gi|269986604|gb|EEZ92886.1| Ribosomal protein S28e [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 85
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
+ VI+++GR G G+VTQVR + + D + I RNV+GPV +GD+L L E+E EA +R
Sbjct: 26 SEVIEIVGRHGVAGEVTQVRCKVLAGMDKDKIIRRNVRGPVVIGDVLMLKETEMEAMPIR 85
>gi|408382512|ref|ZP_11180056.1| 30S ribosomal protein S28e [Methanobacterium formicicum DSM 3637]
gi|410720715|ref|ZP_11360068.1| ribosomal protein S28E/S33 [Methanobacterium sp. Maddingley
MBC34]
gi|407814867|gb|EKF85490.1| 30S ribosomal protein S28e [Methanobacterium formicicum DSM 3637]
gi|410600426|gb|EKQ54954.1| ribosomal protein S28E/S33 [Methanobacterium sp. Maddingley
MBC34]
Length = 68
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A VI+V+ RTG G+V QV+ + ++ D R +TRNV G +R GDIL LL++ REA+ +R
Sbjct: 7 AEVIEVLKRTGMTGEVMQVKCRILEGRDKGRILTRNVMGAIREGDILMLLDTIREAKEIR 66
>gi|444723393|gb|ELW64050.1| 40S ribosomal protein S28 [Tupaia chinensis]
Length = 90
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESER 60
K A V K++GRTGS+GQ TQVRV+FMD + I R KGPV GD+LT E+
Sbjct: 10 KLARVTKLLGRTGSQGQSTQVRVEFMDTSCSTI-RKGKGPVCEGDVLTQSRKEK 62
>gi|183212473|gb|ACC54899.1| ribosomal protein S28 [Xenopus borealis]
Length = 31
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 27/31 (87%)
Query: 36 KRQITRNVKGPVRVGDILTLLESEREARRLR 66
R I RNVKGPVR GD+LTLLESEREARRLR
Sbjct: 1 NRSIIRNVKGPVREGDVLTLLESEREARRLR 31
>gi|448303041|ref|ZP_21492991.1| 30S ribosomal protein S28e [Natronorubrum sulfidifaciens JCM
14089]
gi|445594048|gb|ELY48215.1| 30S ribosomal protein S28e [Natronorubrum sulfidifaciens JCM
14089]
Length = 74
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ G A VI+++G+TG G+ QV R++ ++ R ITRN GPVR GDIL L E+
Sbjct: 6 EESGSTPAEVIEIVGKTGMHGEAMQVKCRIKEGENQGRIITRNCLGPVREGDILQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|444729134|gb|ELW69561.1| 40S ribosomal protein S28 [Tupaia chinensis]
Length = 56
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILT 54
K A V KV+GRTGS+GQ TQV V+FM DT I N+KG V GD+L+
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVHVEFM-DTSHSINCNMKGLVGEGDMLS 56
>gi|195438319|ref|XP_002067084.1| GK19351 [Drosophila willistoni]
gi|194163169|gb|EDW78070.1| GK19351 [Drosophila willistoni]
Length = 62
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
KA VIKV+ R G+ G++T+ R+Q ++ + QI R VKGPVR G I+ + E E
Sbjct: 7 KARVIKVLSRIGASGRLTECRLQLLEPPRHQIMRAVKGPVRTGQIIEIDELE 58
>gi|448728385|ref|ZP_21710714.1| 30S ribosomal protein S28e [Halococcus saccharolyticus DSM 5350]
gi|448733814|ref|ZP_21716056.1| 30S ribosomal protein S28e [Halococcus salifodinae DSM 8989]
gi|445797089|gb|EMA47571.1| 30S ribosomal protein S28e [Halococcus saccharolyticus DSM 5350]
gi|445802334|gb|EMA52641.1| 30S ribosomal protein S28e [Halococcus salifodinae DSM 8989]
Length = 73
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV R+Q ++ R ITRN GPVR GD+L L E+ REA
Sbjct: 12 AEVIEVVGKTGMHGEAMQVKCRIQGGENRGRIITRNCLGPVREGDVLQLRETAREA 67
>gi|297616206|ref|YP_003710344.1| 30S ribosomal protein S28 [Haloarcula marismortui ATCC 43049]
gi|344211147|ref|YP_004795467.1| 30S ribosomal protein S28e [Haloarcula hispanica ATCC 33960]
gi|448630443|ref|ZP_21673098.1| 30S ribosomal protein S28e [Haloarcula vallismortis ATCC 29715]
gi|448640814|ref|ZP_21677601.1| 30S ribosomal protein S28e [Haloarcula sinaiiensis ATCC 33800]
gi|448651276|ref|ZP_21680345.1| 30S ribosomal protein S28e [Haloarcula californiae ATCC 33799]
gi|448667487|ref|ZP_21685987.1| 30S ribosomal protein S28e [Haloarcula amylolytica JCM 13557]
gi|448678669|ref|ZP_21689676.1| 30S ribosomal protein S28e [Haloarcula argentinensis DSM 12282]
gi|448689085|ref|ZP_21694822.1| 30S ribosomal protein S28e [Haloarcula japonica DSM 6131]
gi|343782502|gb|AEM56479.1| 30S ribosomal protein S28e [Haloarcula hispanica ATCC 33960]
gi|445756366|gb|EMA07741.1| 30S ribosomal protein S28e [Haloarcula vallismortis ATCC 29715]
gi|445761339|gb|EMA12587.1| 30S ribosomal protein S28e [Haloarcula sinaiiensis ATCC 33800]
gi|445770055|gb|EMA21123.1| 30S ribosomal protein S28e [Haloarcula amylolytica JCM 13557]
gi|445770803|gb|EMA21861.1| 30S ribosomal protein S28e [Haloarcula californiae ATCC 33799]
gi|445772656|gb|EMA23701.1| 30S ribosomal protein S28e [Haloarcula argentinensis DSM 12282]
gi|445778955|gb|EMA29897.1| 30S ribosomal protein S28e [Haloarcula japonica DSM 6131]
Length = 75
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+GRTG G+ QV R++ ++ R ITRNV GPVR GD+L L E+ REA
Sbjct: 14 AEVIEVVGRTGMHGEAMQVKCRIREGENQGRIITRNVLGPVREGDVLQLRETAREA 69
>gi|397772932|ref|YP_006540478.1| Ribosomal protein S28e [Natrinema sp. J7-2]
gi|448330881|ref|ZP_21520157.1| 30S ribosomal protein S28e [Natrinema versiforme JCM 10478]
gi|448337114|ref|ZP_21526196.1| 30S ribosomal protein S28e [Natrinema pallidum DSM 3751]
gi|448340609|ref|ZP_21529580.1| 30S ribosomal protein S28e [Natrinema gari JCM 14663]
gi|448346252|ref|ZP_21535139.1| 30S ribosomal protein S28e [Natrinema altunense JCM 12890]
gi|397682025|gb|AFO56402.1| Ribosomal protein S28e [Natrinema sp. J7-2]
gi|445610717|gb|ELY64486.1| 30S ribosomal protein S28e [Natrinema versiforme JCM 10478]
gi|445626460|gb|ELY79803.1| 30S ribosomal protein S28e [Natrinema pallidum DSM 3751]
gi|445630042|gb|ELY83312.1| 30S ribosomal protein S28e [Natrinema gari JCM 14663]
gi|445632996|gb|ELY86199.1| 30S ribosomal protein S28e [Natrinema altunense JCM 12890]
Length = 74
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ G A VI+V+G+TG G+ QV R++ ++ R ITRN GPVR GD+L L E+
Sbjct: 6 EESGSTPAEVIEVVGKTGMHGEAMQVKCRIKEGENQGRIITRNCLGPVREGDVLQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|409730533|ref|ZP_11272098.1| 30S ribosomal protein S28e [Halococcus hamelinensis 100A6]
gi|448724358|ref|ZP_21706865.1| 30S ribosomal protein S28e [Halococcus hamelinensis 100A6]
gi|445785675|gb|EMA36461.1| 30S ribosomal protein S28e [Halococcus hamelinensis 100A6]
Length = 72
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV R+Q ++ R ITRN GPVR GDI+ L E+ REA
Sbjct: 11 AEVIEVVGKTGMHGEAMQVNCRIQAGENRGRIITRNCIGPVREGDIIQLKETAREA 66
>gi|448727315|ref|ZP_21709681.1| 30S ribosomal protein S28e [Halococcus morrhuae DSM 1307]
gi|448739334|ref|ZP_21721349.1| 30S ribosomal protein S28e [Halococcus thailandensis JCM 13552]
gi|445791529|gb|EMA42169.1| 30S ribosomal protein S28e [Halococcus morrhuae DSM 1307]
gi|445799929|gb|EMA50298.1| 30S ribosomal protein S28e [Halococcus thailandensis JCM 13552]
Length = 72
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV R+Q ++ R ITRN GPVR GD+L L E+ REA
Sbjct: 11 AEVIEVVGKTGMHGEAMQVNCRIQEGENRGRIITRNCLGPVREGDVLQLRETAREA 66
>gi|448712027|ref|ZP_21701570.1| 30S ribosomal protein S28e [Halobiforma nitratireducens JCM
10879]
gi|445791112|gb|EMA41761.1| 30S ribosomal protein S28e [Halobiforma nitratireducens JCM
10879]
Length = 74
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ G A VI+++G+TG G+ QV R++ ++ R ITRN GPVR GD+L L E+
Sbjct: 6 EENGSTPAEVIEIVGKTGMHGEAMQVKCRIKEGENQGRIITRNCLGPVREGDVLQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|383621967|ref|ZP_09948373.1| 30S ribosomal protein S28e [Halobiforma lacisalsi AJ5]
gi|448702891|ref|ZP_21700248.1| 30S ribosomal protein S28e [Halobiforma lacisalsi AJ5]
gi|445776984|gb|EMA27960.1| 30S ribosomal protein S28e [Halobiforma lacisalsi AJ5]
Length = 74
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+++G+TG G+ QV R++ ++ R ITRN GPVR GD+L L E+ REA
Sbjct: 9 GSTPAEVIEIVGKTGMHGEAMQVKCRIKEGENQGRIITRNCLGPVREGDVLQLRETAREA 68
>gi|433591011|ref|YP_007280507.1| ribosomal protein S28E/S33 [Natrinema pellirubrum DSM 15624]
gi|448300799|ref|ZP_21490798.1| 30S ribosomal protein S28e [Natronorubrum tibetense GA33]
gi|448306175|ref|ZP_21496084.1| 30S ribosomal protein S28e [Natronorubrum bangense JCM 10635]
gi|448314245|ref|ZP_21503947.1| 30S ribosomal protein S28e [Natronolimnobius innermongolicus JCM
12255]
gi|448334545|ref|ZP_21523719.1| 30S ribosomal protein S28e [Natrinema pellirubrum DSM 15624]
gi|448348775|ref|ZP_21537623.1| 30S ribosomal protein S28e [Natrialba taiwanensis DSM 12281]
gi|448361708|ref|ZP_21550322.1| 30S ribosomal protein S28e [Natrialba asiatica DSM 12278]
gi|448368998|ref|ZP_21555765.1| 30S ribosomal protein S28e [Natrialba aegyptia DSM 13077]
gi|448385482|ref|ZP_21563988.1| 30S ribosomal protein S28e [Haloterrigena thermotolerans DSM
11522]
gi|448400388|ref|ZP_21571380.1| 30S ribosomal protein S28e [Haloterrigena limicola JCM 13563]
gi|433305791|gb|AGB31603.1| ribosomal protein S28E/S33 [Natrinema pellirubrum DSM 15624]
gi|445585618|gb|ELY39913.1| 30S ribosomal protein S28e [Natronorubrum tibetense GA33]
gi|445595861|gb|ELY49964.1| 30S ribosomal protein S28e [Natronolimnobius innermongolicus JCM
12255]
gi|445598589|gb|ELY52644.1| 30S ribosomal protein S28e [Natronorubrum bangense JCM 10635]
gi|445619651|gb|ELY73173.1| 30S ribosomal protein S28e [Natrinema pellirubrum DSM 15624]
gi|445642436|gb|ELY95504.1| 30S ribosomal protein S28e [Natrialba taiwanensis DSM 12281]
gi|445649927|gb|ELZ02859.1| 30S ribosomal protein S28e [Natrialba asiatica DSM 12278]
gi|445651541|gb|ELZ04449.1| 30S ribosomal protein S28e [Natrialba aegyptia DSM 13077]
gi|445656977|gb|ELZ09809.1| 30S ribosomal protein S28e [Haloterrigena thermotolerans DSM
11522]
gi|445667411|gb|ELZ20054.1| 30S ribosomal protein S28e [Haloterrigena limicola JCM 13563]
Length = 74
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ G A VI+++G+TG G+ QV R++ ++ R ITRN GPVR GD+L L E+
Sbjct: 6 EESGSTPAEVIEIVGKTGMHGEAMQVKCRIKEGENQGRIITRNCLGPVREGDVLQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|429192504|ref|YP_007178182.1| ribosomal protein S28E/S33 [Natronobacterium gregoryi SP2]
gi|448326416|ref|ZP_21515775.1| 30S ribosomal protein S28e [Natronobacterium gregoryi SP2]
gi|429136722|gb|AFZ73733.1| ribosomal protein S28E/S33 [Natronobacterium gregoryi SP2]
gi|445612053|gb|ELY65792.1| 30S ribosomal protein S28e [Natronobacterium gregoryi SP2]
Length = 74
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+ G A VI+++G+TG G+ QV R++ ++ R ITRN GPVR GD+L L E+
Sbjct: 6 EENGSTPAEVIEIVGKTGMHGEAMQVKCRIKEGENQGRIITRNCLGPVREGDVLQLRETA 65
Query: 60 REA 62
REA
Sbjct: 66 REA 68
>gi|195116769|ref|XP_002002924.1| GI17640 [Drosophila mojavensis]
gi|193913499|gb|EDW12366.1| GI17640 [Drosophila mojavensis]
Length = 65
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTL 55
A V+KV+GR G+RG T+VRV+ + + Q+ + VKGPVR+GDI+ +
Sbjct: 8 ARVVKVLGRVGARGLFTEVRVELLKFPRMQLLKAVKGPVRLGDIIDI 54
>gi|399576693|ref|ZP_10770448.1| SSU ribosomal protein s28e [Halogranum salarium B-1]
gi|399238137|gb|EJN59066.1| SSU ribosomal protein s28e [Halogranum salarium B-1]
Length = 74
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV+ + + + R ITRNV GPVR GDIL L E++R+A
Sbjct: 12 SAEVIEVVGKTGMHGEAMQVKCRIREGSNQGRIITRNVLGPVREGDILQLRETQRDA 68
>gi|389848174|ref|YP_006350413.1| 30S ribosomal protein S28e [Haloferax mediterranei ATCC 33500]
gi|448618381|ref|ZP_21666618.1| 30S ribosomal protein S28e [Haloferax mediterranei ATCC 33500]
gi|388245480|gb|AFK20426.1| 30S ribosomal protein S28e [Haloferax mediterranei ATCC 33500]
gi|445746752|gb|ELZ98210.1| 30S ribosomal protein S28e [Haloferax mediterranei ATCC 33500]
Length = 74
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV+ + + + R ITRNV GPVR GDIL L E++R+A
Sbjct: 13 AEVIEVVGKTGMHGEAMQVKCRIREGSNKGRIITRNVLGPVREGDILQLRETQRDA 68
>gi|448611908|ref|ZP_21662338.1| 30S ribosomal protein S28e [Haloferax mucosum ATCC BAA-1512]
gi|445742669|gb|ELZ94163.1| 30S ribosomal protein S28e [Haloferax mucosum ATCC BAA-1512]
Length = 74
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV+ + + + R ITRNV GPVR GDIL L E++R+A
Sbjct: 13 AEVIEVVGKTGMHGEAMQVKCRIREGSNKGRIITRNVLGPVREGDILQLRETQRDA 68
>gi|300711095|ref|YP_003736909.1| 30S ribosomal protein S28e [Halalkalicoccus jeotgali B3]
gi|448296808|ref|ZP_21486858.1| 30S ribosomal protein S28e [Halalkalicoccus jeotgali B3]
gi|299124778|gb|ADJ15117.1| 30S ribosomal protein S28e [Halalkalicoccus jeotgali B3]
gi|445580485|gb|ELY34863.1| 30S ribosomal protein S28e [Halalkalicoccus jeotgali B3]
Length = 74
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV R++ ++ R ITRNV GPVR GD+L L E+ REA
Sbjct: 12 SAEVIEVVGKTGMHGEAMQVKCRIREGENQGRIITRNVLGPVREGDVLQLRETAREA 68
>gi|292656856|ref|YP_003536753.1| 30S ribosomal protein S28.eR [Haloferax volcanii DS2]
gi|433438627|ref|ZP_20408373.1| 30S ribosomal protein S28e [Haloferax sp. BAB2207]
gi|448290857|ref|ZP_21482002.1| 30S ribosomal protein S28e [Haloferax volcanii DS2]
gi|448546319|ref|ZP_21626483.1| 30S ribosomal protein S28e [Haloferax sp. ATCC BAA-646]
gi|448548306|ref|ZP_21627573.1| 30S ribosomal protein S28e [Haloferax sp. ATCC BAA-645]
gi|448557500|ref|ZP_21632689.1| 30S ribosomal protein S28e [Haloferax sp. ATCC BAA-644]
gi|448565350|ref|ZP_21636217.1| 30S ribosomal protein S28e [Haloferax prahovense DSM 18310]
gi|448568262|ref|ZP_21637839.1| 30S ribosomal protein S28e [Haloferax lucentense DSM 14919]
gi|448583300|ref|ZP_21646656.1| 30S ribosomal protein S28e [Haloferax gibbonsii ATCC 33959]
gi|448600798|ref|ZP_21656177.1| 30S ribosomal protein S28e [Haloferax alexandrinus JCM 10717]
gi|448606021|ref|ZP_21658600.1| 30S ribosomal protein S28e [Haloferax sulfurifontis ATCC BAA-897]
gi|448622903|ref|ZP_21669552.1| 30S ribosomal protein S28e [Haloferax denitrificans ATCC 35960]
gi|291370740|gb|ADE02967.1| ribosomal protein S28.eR [Haloferax volcanii DS2]
gi|432189524|gb|ELK46623.1| 30S ribosomal protein S28e [Haloferax sp. BAB2207]
gi|445577910|gb|ELY32330.1| 30S ribosomal protein S28e [Haloferax volcanii DS2]
gi|445702772|gb|ELZ54712.1| 30S ribosomal protein S28e [Haloferax sp. ATCC BAA-646]
gi|445714057|gb|ELZ65824.1| 30S ribosomal protein S28e [Haloferax sp. ATCC BAA-644]
gi|445714401|gb|ELZ66163.1| 30S ribosomal protein S28e [Haloferax sp. ATCC BAA-645]
gi|445715094|gb|ELZ66850.1| 30S ribosomal protein S28e [Haloferax prahovense DSM 18310]
gi|445727212|gb|ELZ78826.1| 30S ribosomal protein S28e [Haloferax lucentense DSM 14919]
gi|445729529|gb|ELZ81124.1| 30S ribosomal protein S28e [Haloferax gibbonsii ATCC 33959]
gi|445734811|gb|ELZ86367.1| 30S ribosomal protein S28e [Haloferax alexandrinus JCM 10717]
gi|445739438|gb|ELZ90945.1| 30S ribosomal protein S28e [Haloferax sulfurifontis ATCC BAA-897]
gi|445753411|gb|EMA04828.1| 30S ribosomal protein S28e [Haloferax denitrificans ATCC 35960]
Length = 74
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A VI+V+G+TG G+ QV+ + + + R ITRNV GPVR GDIL L E++R+A
Sbjct: 13 AEVIEVVGKTGMHGEAMQVKCRIREGSNQGRIITRNVLGPVREGDILQLRETQRDA 68
>gi|223477747|ref|YP_002582427.1| 30S ribosomal protein S28e [Thermococcus sp. AM4]
gi|240103932|ref|YP_002960241.1| 30S ribosomal protein S28e [Thermococcus gammatolerans EJ3]
gi|214032973|gb|EEB73801.1| SSU ribosomal protein S28e [Thermococcus sp. AM4]
gi|239911486|gb|ACS34377.1| SSU ribosomal protein S28E (rps28E) [Thermococcus gammatolerans
EJ3]
Length = 70
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 2 DTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTL 55
D G P A VI+++ RTG G VTQV+V+ ++ D R I RNVKGPVRVGDI+ L
Sbjct: 3 DEGYP--AEVIEIVARTGVTGGVTQVKVRILEGRDKGRVIRRNVKGPVRVGDIVIL 56
>gi|313125971|ref|YP_004036241.1| 30S ribosomal protein S28e [Halogeometricum borinquense DSM
11551]
gi|448285811|ref|ZP_21477050.1| 30S ribosomal protein S28e [Halogeometricum borinquense DSM
11551]
gi|448414156|ref|ZP_21577295.1| 30S ribosomal protein S28e [Halosarcina pallida JCM 14848]
gi|312292336|gb|ADQ66796.1| SSU ribosomal protein S28E [Halogeometricum borinquense DSM
11551]
gi|445575841|gb|ELY30304.1| 30S ribosomal protein S28e [Halogeometricum borinquense DSM
11551]
gi|445682449|gb|ELZ34866.1| 30S ribosomal protein S28e [Halosarcina pallida JCM 14848]
Length = 74
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A VI+++G+TG G+ QV+ + + + R ITRNV GPVR GDIL L E++R+A
Sbjct: 12 SAEVIEIVGKTGMHGEAMQVKCRIREGSNQGRIITRNVLGPVREGDILQLRETQRDA 68
>gi|257051836|ref|YP_003129669.1| 30S ribosomal protein S28e [Halorhabdus utahensis DSM 12940]
gi|256690599|gb|ACV10936.1| Ribosomal protein S28e [Halorhabdus utahensis DSM 12940]
Length = 75
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+GRTG G+ QV R++ ++ R ITRNV G VR GD+L L E+ REA
Sbjct: 10 GSTPAEVIEVVGRTGMHGEAMQVKCRIREGENKGRIITRNVLGGVREGDVLQLRETAREA 69
>gi|322369451|ref|ZP_08044016.1| 30S ribosomal protein S28e [Haladaptatus paucihalophilus DX253]
gi|320551183|gb|EFW92832.1| 30S ribosomal protein S28e [Haladaptatus paucihalophilus DX253]
Length = 75
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A VI+++G+TG G+ QV+ + + + R ITRN GPVR GD+L L E+ REA
Sbjct: 13 SAEVIEIVGKTGMHGEAMQVKCRIREGSNQGRIITRNCLGPVREGDVLQLRETAREA 69
>gi|335438733|ref|ZP_08561469.1| 30S ribosomal protein S28e [Halorhabdus tiamatea SARL4B]
gi|334890855|gb|EGM29115.1| 30S ribosomal protein S28e [Halorhabdus tiamatea SARL4B]
Length = 75
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 5 GPKKATVIKVIGRTGSRGQVTQV--RVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
G A VI+V+GRTG G+ QV R++ ++ R ITRNV G VR GD+L L E+ REA
Sbjct: 10 GSTPAEVIEVVGRTGMHGEAMQVKCRIREGENKGRIITRNVLGGVREGDVLQLRETAREA 69
>gi|324550032|gb|ADY49752.1| 40S ribosomal protein S28, partial [Ascaris suum]
Length = 110
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 13 KVIGRTGSRGQVTQVRVQFMDD-TKRQITRNVKGPVRVGDILTLLESEREARRL 65
++GR S G+ T VRV F R I R V GPVR GD+ TL +ER+A RL
Sbjct: 12 HLLGRPVSHGRCTLVRVDFSPHPNHRYIVRKVSGPVREGDVFTLQNAERQAHRL 65
>gi|310771969|emb|CBH28922.1| 40S RIBOSOMAL PROTEIN S28 [Anncaliia algerae]
Length = 67
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
V+K+ +TGS G +T +++ + T R R + GPVR GDI+ LLE ERE RR R
Sbjct: 12 VVKLFNKTGSGGAITICQLELLH-TGRHXQRAIMGPVREGDIIKLLECEREHRRGR 66
>gi|110668781|ref|YP_658592.1| 30S ribosomal protein S28e [Haloquadratum walsbyi DSM 16790]
gi|385804288|ref|YP_005840688.1| 30S ribosomal protein S28 [Haloquadratum walsbyi C23]
gi|121692163|sp|Q18GA9.1|RS28_HALWD RecName: Full=30S ribosomal protein S28e
gi|109626528|emb|CAJ52991.1| 30S ribosomal protein S28e [Haloquadratum walsbyi DSM 16790]
gi|339729780|emb|CCC41061.1| 30S ribosomal protein S28e [Haloquadratum walsbyi C23]
Length = 74
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTK--RQITRNVKGPVRVGDILTLLESEREA 62
A +I+++G+TG G+ QV+ + + + R ITRNV GPVR GD+L L E++R+A
Sbjct: 12 SAEIIEIVGKTGMHGEAMQVKCRIREGSNQGRIITRNVLGPVREGDVLQLRETQRDA 68
>gi|429961733|gb|ELA41278.1| hypothetical protein VICG_01651 [Vittaforma corneae ATCC 50505]
Length = 84
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66
A V+ V GRTGS G V +V + DT + I R+V+GPV VG +L L E RE+RR R
Sbjct: 28 AQVLNVYGRTGSGGDVNICKV-LVRDTGKTIFRSVQGPVDVGHLLALRECVRESRRSR 84
>gi|429965073|gb|ELA47070.1| hypothetical protein VCUG_01431 [Vavraia culicis 'floridensis']
Length = 128
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
VIK I R+G G +T +++ +++ KR + R V GPVR GD++ LL+ ERE RR
Sbjct: 73 VIKRIERSGPGGPITLCQLELLEE-KRTLQRAVMGPVREGDLIMLLDCEREHRR 125
>gi|348587800|ref|XP_003479655.1| PREDICTED: 40S ribosomal protein S28-like [Cavia porcellus]
Length = 89
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLL 56
K A V KV+GR GS+GQ Q+ +FMDD I VK + G++L LL
Sbjct: 10 KLANVTKVLGRPGSQGQCKQLLGEFMDDVSLAIIHKVKESMHEGELLILL 59
>gi|440494006|gb|ELQ76422.1| 40S ribosomal protein S28 [Trachipleistophora hominis]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARR 64
VIK I R+G G +T +++ ++ KR + R + GPV+ GD++ LL+SERE RR
Sbjct: 26 VIKKIERSGPGGPITLCQLELTEE-KRTLQRAIMGPVQEGDLIMLLDSEREHRR 78
>gi|195438321|ref|XP_002067085.1| GK24207 [Drosophila willistoni]
gi|194163170|gb|EDW78071.1| GK24207 [Drosophila willistoni]
Length = 60
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESE 59
+A VIKV+ R G+RG TQ RV+ + + Q VKG VR GDI+ + E E
Sbjct: 7 RARVIKVLSRIGARGDFTQCRVELLQFPRFQTMCAVKGTVRPGDIINIEEFE 58
>gi|145540798|ref|XP_001456088.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423898|emb|CAK88691.1| unnamed protein product [Paramecium tetraurelia]
Length = 321
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 36 KRQITRNVKGPVRVGDILTLLESEREARRLR 66
+R + RNV GPVR GD L L+E EREARRLR
Sbjct: 291 QRTLIRNVMGPVRKGDTLELMECEREARRLR 321
>gi|444726503|gb|ELW67034.1| Cleavage and polyadenylation specificity factor subunit 6 [Tupaia
chinensis]
Length = 577
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRN 42
K A+V KV+GRTGS+G QV +FMDD R I RN
Sbjct: 10 KLASVTKVLGRTGSQGHCRQVHREFMDDASRSIIRN 45
>gi|387594482|gb|EIJ89506.1| 30S ribosomal protein S28e [Nematocida parisii ERTm3]
Length = 67
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
P A V +V+ RTG G V+V + TKR +TR + GPVR GD + LLE+ER+ +
Sbjct: 7 PVLAQVTEVMQRTGPGGGCQVVKVMIVS-TKRSLTRVIDGPVRKGDHVYLLEAERDLK 63
>gi|387596678|gb|EIJ94299.1| 30S ribosomal protein S28e [Nematocida parisii ERTm1]
Length = 67
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
P A V +V+ RTG G V+V + TKR +TR + GPVR GD + LLE+ER+ +
Sbjct: 7 PVLAQVTEVMQRTGPGGGCQVVKVMIVS-TKRSLTRVIDGPVRKGDHVYLLEAERDLK 63
>gi|378756649|gb|EHY66673.1| 30S ribosomal protein S28e [Nematocida sp. 1 ERTm2]
Length = 67
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREAR 63
P A V +V+ RTG G V+V + TKR +TR ++GPVR GD + LLE+ER+ +
Sbjct: 7 PVLAQVTEVMQRTGPGGGCQVVKVMIVS-TKRSLTRVMEGPVRKGDHVYLLEAERDLK 63
>gi|440900803|gb|ELR51855.1| hypothetical protein M91_21651 [Bos grunniens mutus]
Length = 121
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 11 VIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKG 45
V K++ RT S+GQ Q+ V+FMDD I NVKG
Sbjct: 17 VTKLLDRTSSQGQCMQMHVKFMDDISCSIICNVKG 51
>gi|255513344|gb|EET89610.1| Ribosomal protein S28e [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 91
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 9 ATVIKV--IGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARR 64
A +++V + +TG G+V V + ++ D R I RN GP+++GDI+ L ++ REAR
Sbjct: 28 AEIVEVNRVSKTGMYGEVYSVTCRILEGKDKGRIIRRNSIGPIKIGDIIRLPDTSREARE 87
Query: 65 LR 66
++
Sbjct: 88 IK 89
>gi|14270770|emb|CAC39482.1| small subunit ribosomal protein [Quercus suber]
Length = 50
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQ-ITRNVKGPV 47
K A V+KV+GRTGS +VTQVRV+F+ + I RNVKG V
Sbjct: 6 KHAVVVKVMGRTGSEVRVTQVRVKFLGLIRTGFIMRNVKGQV 47
>gi|10580694|gb|AAG19538.1| 30S ribosomal protein S28E [Halobacterium sp. NRC-1]
Length = 46
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 26 QVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREA 62
+ R+Q + R ITRNV GPVRVGD++ L E+ REA
Sbjct: 4 KCRIQEGGNQGRIITRNVLGPVRVGDVIQLKETAREA 40
>gi|424812138|ref|ZP_18237378.1| ribosomal protein S28E/S33 [Candidatus Nanosalinarum sp. J07AB56]
gi|339756360|gb|EGQ39943.1| ribosomal protein S28E/S33 [Candidatus Nanosalinarum sp. J07AB56]
Length = 58
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESERE 61
ATV+ VIG G RG V ++R + + D + + RN +GP++ D++ L+E+E E
Sbjct: 4 ATVVDVIGDQGHRG-VEEIRCRIIEGDQEGKILVRNARGPIQEEDVVHLMETEME 57
>gi|326562828|gb|ADZ95644.1| 40S ribosomal protein S28e [Nosema bombycis]
Length = 67
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 9 ATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTL 55
ATV KV R GS G V V+V ++ R + R VKGP++VGD + L
Sbjct: 11 ATVEKVGNRGGSSGGVVAVKV-VLEHNGRYLNRVVKGPIKVGDKIAL 56
>gi|198418963|ref|XP_002121545.1| PREDICTED: similar to viral A-type inclusion protein, putative
[Ciona intestinalis]
Length = 765
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 20/21 (95%), Positives = 20/21 (95%)
Query: 46 PVRVGDILTLLESEREARRLR 66
PVR GDILTLLESEREARRLR
Sbjct: 745 PVREGDILTLLESEREARRLR 765
>gi|256426123|ref|YP_003126776.1| DNA-directed DNA polymerase [Chitinophaga pinensis DSM 2588]
gi|256041031|gb|ACU64575.1| DNA-directed DNA polymerase [Chitinophaga pinensis DSM 2588]
Length = 371
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 10 TVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESERE 61
TV + + R G +G+ +++++ D RQITRN PV VGD+ +LE+ ++
Sbjct: 278 TVYERLKRYGLKGRTVTLKIKYSD--FRQITRNQSFPVPVGDLEKILETAKQ 327
>gi|395513442|ref|XP_003760933.1| PREDICTED: 40S ribosomal protein S28 [Sarcophilus harrisii]
Length = 38
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 1 MDTG--GP-KKATVIKVIGRTGSRGQVTQVRVQFM 32
MDTG P K A V KV+GRTGS+GQ TQVRV+
Sbjct: 1 MDTGRVQPIKLARVTKVLGRTGSQGQCTQVRVECF 35
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 918,438,879
Number of Sequences: 23463169
Number of extensions: 25626505
Number of successful extensions: 61817
Number of sequences better than 100.0: 563
Number of HSP's better than 100.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 61027
Number of HSP's gapped (non-prelim): 563
length of query: 66
length of database: 8,064,228,071
effective HSP length: 38
effective length of query: 28
effective length of database: 7,172,627,649
effective search space: 200833574172
effective search space used: 200833574172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)