Query 037546
Match_columns 66
No_of_seqs 107 out of 154
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 23:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u5c_c S33, YS27, 40S ribosoma 100.0 7.9E-43 2.7E-47 214.8 6.0 66 1-66 1-67 (67)
2 2xzm_1 Ribosomal protein S28E 100.0 5.8E-41 2E-45 207.0 6.4 66 1-66 1-68 (68)
3 3j20_X 30S ribosomal protein S 100.0 4.2E-40 1.4E-44 204.5 6.8 66 1-66 1-68 (71)
4 1ne3_A 30S ribosomal protein S 100.0 4E-40 1.4E-44 203.2 5.9 64 1-66 1-66 (68)
5 1ny4_A 30S ribosomal protein S 100.0 1.6E-39 5.6E-44 206.4 6.3 66 1-66 1-68 (82)
6 2f41_A Transcription factor FA 57.2 5.6 0.00019 23.6 1.8 14 42-55 68-81 (121)
7 2k75_A Uncharacterized protein 56.7 30 0.001 20.8 5.5 47 8-56 19-69 (106)
8 3u5c_R RP51A, 40S ribosomal pr 56.0 2 6.8E-05 28.9 -0.4 21 42-63 61-81 (136)
9 1wjj_A Hypothetical protein F2 52.6 43 0.0015 21.8 5.7 35 21-57 60-97 (145)
10 1zld_A PTR TOXA, PTR necrosis 51.9 15 0.00051 23.8 3.3 43 14-56 28-87 (118)
11 1dgw_Y Canavalin; duplicated s 50.6 6 0.0002 24.3 1.2 16 40-55 3-18 (93)
12 2jov_A Hypothetical protein CP 50.5 6.3 0.00021 24.4 1.3 13 42-54 45-57 (85)
13 2a28_A BZZ1 protein; SH3 domai 48.0 8.6 0.00029 19.7 1.4 14 46-59 18-31 (54)
14 1i07_A Epidermal growth factor 47.1 10 0.00034 19.9 1.6 13 46-58 19-31 (60)
15 2f3x_A Transcription factor FA 46.9 9.8 0.00034 24.2 1.8 14 42-55 104-117 (157)
16 3d6x_A (3R)-hydroxymyristoyl-[ 46.9 9.7 0.00033 23.0 1.7 13 43-55 97-109 (146)
17 1zuy_A Myosin-5 isoform; SH3 d 46.7 9.2 0.00031 19.7 1.4 14 46-59 19-32 (58)
18 1g2b_A Spectrin alpha chain; c 46.1 9.4 0.00032 20.3 1.4 14 46-59 39-52 (62)
19 1yn8_A NBP2, NAP1-binding prot 45.7 9.7 0.00033 19.7 1.4 14 46-59 19-32 (59)
20 2lj0_A Sorbin and SH3 domain-c 45.4 9.5 0.00033 21.2 1.4 14 46-59 24-37 (65)
21 2oaw_A Spectrin alpha chain, b 45.3 9.8 0.00034 20.0 1.4 13 46-58 19-31 (65)
22 2v1q_A SLA1, cytoskeleton asse 44.9 10 0.00035 19.6 1.4 13 46-58 20-32 (60)
23 1k4u_S Phagocyte NADPH oxidase 44.7 10 0.00035 20.0 1.4 13 46-58 23-35 (62)
24 1oot_A Hypothetical 40.4 kDa p 44.6 10 0.00035 19.8 1.4 13 46-58 21-33 (60)
25 3e0e_A Replication protein A; 44.5 46 0.0016 19.5 5.1 46 8-55 17-72 (97)
26 1sem_A SEM-5; SRC-homology 3 ( 44.2 11 0.00036 19.5 1.4 14 46-59 20-33 (58)
27 2xzm_V RPS17E; ribosome, trans 44.1 4.3 0.00015 27.0 -0.2 20 43-63 62-81 (130)
28 1jo8_A ABP1P, actin binding pr 44.0 11 0.00036 19.6 1.4 13 46-58 18-30 (58)
29 1gcq_C VAV proto-oncogene; SH3 43.9 10 0.00036 20.3 1.4 13 46-58 28-40 (70)
30 1qd7_I S17 ribosomal protein; 43.7 17 0.0006 22.3 2.6 21 38-58 41-61 (89)
31 1cka_A C-CRK N-terminal SH3 do 43.1 11 0.00039 19.4 1.4 14 46-59 19-32 (57)
32 2lcd_A AT-rich interactive dom 49.0 5.1 0.00017 26.4 0.0 37 24-60 32-70 (118)
33 1zx6_A YPR154WP; SH3 domain, p 42.8 11 0.00039 19.5 1.4 13 46-58 20-32 (58)
34 3r8n_Q 30S ribosomal protein S 42.7 9.2 0.00031 23.0 1.1 14 45-58 48-61 (80)
35 2x3w_D Syndapin I, protein kin 42.6 11 0.00038 19.6 1.4 13 46-58 21-33 (60)
36 1w1f_A Tyrosine-protein kinase 42.4 12 0.00039 19.8 1.4 14 46-59 25-38 (65)
37 1wxb_A Epidermal growth factor 42.3 11 0.00039 20.3 1.4 14 46-59 25-38 (68)
38 3bnv_A CJ0977; virulence facto 42.3 13 0.00044 23.3 1.8 14 42-55 95-108 (152)
39 1uti_A GRB2-related adaptor pr 42.2 12 0.0004 19.4 1.4 13 46-58 19-31 (58)
40 2iim_A Proto-oncogene tyrosine 42.2 12 0.0004 19.7 1.4 13 47-59 25-37 (62)
41 1uj0_A Signal transducing adap 42.1 12 0.0004 19.8 1.4 13 46-58 23-35 (62)
42 2drm_A Acanthamoeba myosin IB; 41.9 12 0.00041 19.3 1.4 14 46-59 21-34 (58)
43 1ruw_A Myosin-3 isoform, MYO3; 41.9 12 0.0004 20.1 1.4 14 46-59 21-34 (69)
44 2bz8_A SH3-domain kinase bindi 41.9 12 0.00041 19.4 1.4 14 46-59 19-32 (58)
45 1zlm_A Osteoclast stimulating 41.7 12 0.00042 19.4 1.4 13 46-58 21-33 (58)
46 2gnc_A SLIT-ROBO RHO GTPase-ac 41.1 13 0.00043 19.5 1.4 13 46-58 24-36 (60)
47 1k1z_A VAV; SH3, proto-oncogen 41.0 12 0.00042 20.6 1.4 14 46-59 36-49 (78)
48 2k2m_A EPS8-like protein 1; al 40.8 13 0.00043 20.2 1.4 14 46-59 26-39 (68)
49 2lx7_A GAS-7, growth arrest-sp 40.7 10 0.00034 21.0 1.0 14 46-59 22-35 (60)
50 1tuc_A Alpha-spectrin; capping 40.6 13 0.00044 19.9 1.4 14 46-59 7-20 (63)
51 2vwf_A Growth factor receptor- 40.5 13 0.00045 19.1 1.4 13 46-58 20-32 (58)
52 1b07_A Protein (proto-oncogene 40.4 13 0.00044 20.1 1.4 14 46-59 21-34 (65)
53 2jte_A CD2-associated protein; 40.3 13 0.00045 19.6 1.4 13 46-58 24-36 (64)
54 1wxt_A Hypothetical protein FL 40.1 13 0.00045 20.0 1.4 14 46-59 25-38 (68)
55 2g6f_X RHO guanine nucleotide 39.9 13 0.00046 19.3 1.4 14 46-59 22-35 (59)
56 2j6f_A CD2-associated protein; 39.7 13 0.00046 19.5 1.4 13 46-58 19-31 (62)
57 1y0m_A 1-phosphatidylinositol- 39.7 14 0.00046 19.4 1.4 13 46-58 21-33 (61)
58 2dl4_A Protein STAC; SH3 domai 39.6 13 0.00044 20.0 1.4 13 46-58 25-37 (68)
59 2ct4_A CDC42-interacting prote 39.6 13 0.00046 20.0 1.4 14 46-59 25-38 (70)
60 1w70_A Neutrophil cytosol fact 39.3 14 0.00048 19.4 1.4 14 46-59 22-35 (60)
61 2cuc_A SH3 domain containing r 39.0 14 0.00048 19.7 1.4 14 46-59 25-38 (70)
62 2gll_A FABZ, (3R)-hydroxymyris 38.9 15 0.0005 23.6 1.7 13 43-55 121-133 (171)
63 1gl5_A Tyrosine-protein kinase 38.7 14 0.00048 19.8 1.4 14 46-59 20-33 (67)
64 2dl3_A Sorbin and SH3 domain-c 38.6 14 0.00049 19.7 1.4 13 46-58 25-37 (68)
65 3esi_A Uncharacterized protein 38.5 15 0.00052 23.4 1.7 14 43-56 74-87 (129)
66 1wyx_A CRK-associated substrat 38.5 13 0.00046 19.9 1.3 14 46-59 21-34 (69)
67 2ew3_A SH3-containing GRB2-lik 38.4 14 0.00049 20.2 1.4 13 46-58 21-33 (68)
68 2jt4_A Cytoskeleton assembly c 38.4 14 0.00049 19.7 1.4 13 46-58 24-36 (71)
69 2ed1_A 130 kDa phosphatidylino 38.3 13 0.00044 20.5 1.2 13 46-58 28-40 (76)
70 1zuu_A BZZ1 protein; SH3 domai 38.3 11 0.00037 19.5 0.8 14 46-59 19-32 (58)
71 1x2p_A Protein arginine N-meth 38.2 14 0.00048 19.8 1.4 13 46-58 25-37 (68)
72 2kxd_A 11-MER peptide, SH3 dom 38.2 14 0.00049 20.1 1.4 14 46-59 17-30 (73)
73 1z6b_A Pffabz, fatty acid synt 38.2 16 0.00054 22.4 1.7 13 43-55 103-115 (154)
74 2fpe_A C-JUN-amino-terminal ki 38.1 15 0.00051 19.3 1.4 14 46-59 21-34 (62)
75 2v1r_A Peroxisomal membrane pr 38.0 15 0.0005 20.3 1.4 14 46-59 33-46 (80)
76 4h4g_A (3R)-hydroxymyristoyl-[ 38.0 16 0.00053 23.5 1.7 13 43-55 107-119 (160)
77 1x2k_A OSTF1, osteoclast stimu 37.8 14 0.00049 19.8 1.4 13 46-58 25-37 (68)
78 1s1n_A Nephrocystin 1; beta ba 37.8 13 0.00045 19.8 1.2 14 46-59 28-41 (68)
79 2b86_A Cytoplasmic protein NCK 37.7 15 0.00051 20.3 1.4 14 46-59 22-35 (67)
80 2ct3_A Vinexin; SH3 domian, st 37.7 14 0.00047 19.8 1.2 13 46-58 25-37 (70)
81 2j05_A RAS GTPase-activating p 37.7 15 0.00052 19.5 1.4 13 46-58 24-36 (65)
82 2dl8_A SLIT-ROBO RHO GTPase-ac 37.6 15 0.00051 20.0 1.4 13 46-58 27-39 (72)
83 2xmf_A Myosin 1E SH3; motor pr 37.5 15 0.00053 19.1 1.4 14 46-59 23-36 (60)
84 2bzy_A CRK-like protein, CRKL 37.5 15 0.00052 19.7 1.4 14 46-59 21-34 (67)
85 2egc_A SH3 and PX domain-conta 37.4 14 0.00047 20.4 1.3 14 46-59 27-40 (75)
86 2da9_A SH3-domain kinase bindi 37.4 13 0.00046 20.0 1.2 13 46-58 25-37 (70)
87 2dl7_A KIAA0769 protein; SH3 d 37.3 15 0.00052 20.0 1.4 13 46-58 26-38 (73)
88 1gbq_A GRB2; complex (signal t 37.3 13 0.00043 20.5 1.1 14 46-59 27-40 (74)
89 2djq_A SH3 domain containing r 37.2 15 0.00051 19.6 1.4 13 46-58 25-37 (68)
90 2dil_A Proline-serine-threonin 37.2 15 0.00053 19.6 1.4 13 46-58 26-38 (69)
91 2kxc_A Brain-specific angiogen 37.1 15 0.0005 19.6 1.3 13 46-58 25-37 (67)
92 2ydl_A SH3 domain-containing k 37.1 15 0.00052 20.2 1.4 13 46-58 20-32 (69)
93 2ak5_A RHO guanine nucleotide 37.1 16 0.00054 19.3 1.4 13 47-59 25-37 (64)
94 1tg0_A BBC1 protein, myosin ta 37.1 16 0.00053 19.6 1.4 13 47-59 26-38 (68)
95 2k9g_A SH3 domain-containing k 36.8 16 0.00054 19.8 1.4 13 46-58 27-39 (73)
96 2eyx_A V-CRK sarcoma virus CT1 36.8 14 0.00049 19.9 1.2 14 46-59 26-39 (67)
97 1j3t_A Intersectin 2; beta bar 36.8 16 0.00054 20.0 1.4 13 46-58 28-40 (74)
98 3anw_A GINS51, putative unchar 36.6 15 0.00051 24.6 1.5 17 43-59 155-171 (188)
99 1csk_A C-SRC SH3 domain; phosp 36.6 16 0.00055 19.7 1.4 12 46-57 29-40 (71)
100 1uhc_A KIAA1010 protein; beta 36.4 16 0.00054 20.2 1.4 14 46-59 31-44 (79)
101 2csi_A RIM-BP2, RIM binding pr 36.3 16 0.00056 20.1 1.5 13 46-58 32-44 (76)
102 2jw4_A Cytoplasmic protein NCK 36.3 16 0.00053 20.0 1.4 13 46-58 25-37 (72)
103 2yuo_A CIP85, RUN and TBC1 dom 36.3 16 0.00055 20.1 1.4 13 46-58 25-37 (78)
104 1spk_A RSGI RUH-010, riken cDN 36.3 15 0.00053 19.8 1.3 13 46-58 26-38 (72)
105 2dmo_A Neutrophil cytosol fact 36.3 14 0.00049 19.8 1.2 14 46-59 25-38 (68)
106 2pqh_A Spectrin alpha chain, b 36.3 16 0.00055 20.3 1.4 13 46-58 20-32 (80)
107 2epd_A RHO GTPase-activating p 36.2 14 0.00048 20.4 1.1 13 46-58 28-40 (76)
108 1x6g_A Megakaryocyte-associate 36.1 16 0.00055 20.5 1.4 14 46-59 35-48 (81)
109 2ed0_A ABL interactor 2; coile 36.0 16 0.00055 20.2 1.4 14 46-59 35-48 (78)
110 2dnu_A RUH-061, SH3 multiple d 36.0 16 0.00054 19.6 1.3 13 46-58 26-38 (71)
111 2dm1_A Protein VAV-2; RHO fami 35.9 14 0.00047 20.2 1.1 14 46-59 25-38 (73)
112 2cud_A SRC-like-adapter; SH3 d 35.8 16 0.00054 20.4 1.4 13 46-58 35-47 (79)
113 2yun_A Nostrin; nitric oxide s 35.8 16 0.00056 20.1 1.4 14 46-59 25-38 (79)
114 2d8h_A SH3YL1 protein; SH3 dom 35.5 15 0.0005 20.4 1.1 13 47-59 36-48 (80)
115 3c0c_A Endophilin-A2; endocyto 35.1 17 0.00059 19.8 1.4 14 46-59 31-44 (73)
116 2nwm_A Vinexin; cell adhesion; 34.9 18 0.0006 19.6 1.4 13 46-58 19-31 (65)
117 4i83_A 3-hydroxyacyl-[acyl-car 34.9 19 0.00065 22.4 1.7 13 43-55 103-115 (152)
118 1uhf_A Intersectin 2; beta bar 34.8 16 0.00055 19.7 1.3 13 46-58 26-38 (69)
119 1ue9_A Intersectin 2; beta bar 34.7 17 0.00058 20.0 1.4 13 46-58 25-37 (80)
120 3iz6_Q 40S ribosomal protein S 34.4 3.1 0.0001 28.2 -2.2 22 41-63 60-81 (141)
121 2d8j_A FYN-related kinase; SH3 34.3 13 0.00045 20.2 0.8 13 46-58 25-37 (77)
122 1aww_A ATK, AMGX1, BPK, bruton 34.3 14 0.00049 19.7 1.0 14 46-59 26-39 (67)
123 1nm7_A Peroxisomal membrane pr 34.3 17 0.00057 20.4 1.3 14 46-59 26-39 (69)
124 2ebp_A SAM and SH3 domain-cont 34.0 18 0.00063 19.9 1.4 13 46-58 29-41 (73)
125 4e6r_A Cytoplasmic protein NCK 34.0 19 0.00066 18.3 1.4 14 46-59 19-32 (58)
126 2eqi_A Phospholipase C, gamma 33.9 14 0.00049 19.8 0.9 14 46-59 25-38 (69)
127 2fei_A CD2-associated protein; 33.8 15 0.0005 20.0 1.0 13 46-58 19-31 (65)
128 3d3r_A Hydrogenase assembly ch 33.8 24 0.00081 22.3 2.1 10 6-15 25-34 (103)
129 1iq6_A (R)-hydratase, (R)-spec 33.7 22 0.00076 20.4 1.8 15 42-56 83-97 (134)
130 2enm_A Sorting nexin-9; SH3-li 33.7 18 0.00062 19.8 1.4 14 46-59 28-41 (77)
131 2i0n_A Class VII unconventiona 33.7 17 0.00058 20.3 1.2 14 46-59 28-41 (80)
132 2ege_A Uncharacterized protein 33.7 20 0.00067 19.8 1.5 12 46-57 32-43 (75)
133 2vqe_Q 30S ribosomal protein S 33.6 15 0.00052 23.2 1.1 15 44-58 48-62 (105)
134 3dm3_A Replication factor A; p 33.6 79 0.0027 19.0 5.5 36 16-55 34-75 (105)
135 2fpf_A C-JUN-amino-terminal ki 33.6 19 0.00065 19.4 1.4 14 46-59 24-37 (71)
136 2dl5_A KIAA0769 protein; SH3 d 33.6 17 0.00058 20.1 1.2 14 46-59 31-44 (78)
137 2dbm_A SH3-containing GRB2-lik 33.4 16 0.00055 19.9 1.1 14 46-59 25-38 (73)
138 2e5k_A Suppressor of T-cell re 33.1 21 0.00072 20.4 1.6 14 46-59 34-47 (94)
139 3eg3_A Proto-oncogene tyrosine 33.0 20 0.00069 18.5 1.4 13 46-58 23-35 (63)
140 2ekh_A SH3 and PX domain-conta 33.0 19 0.00066 20.0 1.4 14 46-59 26-39 (80)
141 2c2i_A RV0130; hotdog, hydrata 33.0 21 0.00072 21.4 1.7 15 42-56 95-109 (151)
142 1x43_A Endophilin B1, SH3 doma 32.9 20 0.00067 19.9 1.4 12 47-58 36-47 (81)
143 3cqt_A P59-FYN, proto-oncogene 32.9 17 0.00059 20.4 1.2 14 46-59 23-36 (79)
144 2cre_A HEF-like protein; SH3 d 32.8 14 0.00048 19.8 0.8 13 46-58 25-37 (71)
145 2vkn_A Protein SSU81; membrane 32.8 21 0.00071 19.2 1.5 13 46-58 25-37 (70)
146 3ulr_B SRC substrate cortactin 32.7 20 0.0007 18.7 1.4 14 46-59 27-40 (65)
147 1u1z_A (3R)-hydroxymyristoyl-[ 32.7 21 0.00073 22.5 1.7 13 43-55 117-129 (168)
148 1d7q_A Translation initiation 32.5 1.1E+02 0.0036 20.2 5.2 43 6-57 32-80 (143)
149 1neg_A Spectrin alpha chain, b 32.3 20 0.00068 20.6 1.4 14 46-59 35-48 (83)
150 2o9s_A Ponsin; SH3 domain, sig 32.3 21 0.00071 19.0 1.4 13 46-58 24-36 (67)
151 1wi7_A SH3-domain kinase bindi 32.2 14 0.00046 19.8 0.6 13 46-58 25-37 (68)
152 1jqq_A PEX13P, peroxisomal mem 31.8 21 0.0007 20.3 1.4 14 46-59 33-46 (92)
153 2dlp_A KIAA1783 protein; SH3 d 31.8 20 0.00068 20.2 1.3 13 46-58 26-38 (85)
154 2dbk_A CRK-like protein; struc 31.7 21 0.00071 20.3 1.4 14 46-59 36-49 (88)
155 3ngp_A Spectrin alpha chain, b 31.7 22 0.00075 18.3 1.4 14 46-59 24-37 (62)
156 2yup_A Vinexin; sorbin and SH3 31.4 19 0.00066 20.4 1.2 13 46-58 35-47 (90)
157 2l0a_A STAM-1, signal transduc 31.4 21 0.00073 19.9 1.4 13 46-58 35-47 (72)
158 3thk_A Spectrin alpha chain, b 31.3 22 0.00075 19.1 1.4 14 46-59 23-36 (73)
159 2yv5_A YJEQ protein; hydrolase 31.3 1.2E+02 0.0042 20.5 6.6 47 1-56 1-53 (302)
160 2lcs_A NAP1-binding protein 2; 31.2 22 0.00074 19.7 1.4 14 46-59 23-36 (73)
161 4esr_A Jouberin; AHI-1, AHI1, 31.0 22 0.00077 18.9 1.4 13 46-58 24-36 (69)
162 1wx6_A Cytoplasmic protein NCK 30.9 21 0.00072 20.2 1.4 13 46-58 35-47 (91)
163 1u5s_A Cytoplasmic protein NCK 30.8 16 0.00054 19.6 0.8 13 46-58 24-36 (71)
164 1ah9_A IF1, initiation factor 30.8 74 0.0025 17.8 4.9 40 8-56 9-55 (71)
165 3u23_A CD2-associated protein; 30.8 23 0.00079 18.3 1.4 13 46-58 25-37 (65)
166 2rf0_A Mitogen-activated prote 30.2 22 0.00077 20.6 1.4 14 46-59 47-60 (89)
167 2ysq_A RHO guanine nucleotide 30.1 22 0.00076 19.7 1.4 13 46-58 28-40 (81)
168 2ecz_A Sorbin and SH3 domain-c 29.9 14 0.00048 19.8 0.4 13 46-58 25-37 (70)
169 4f14_A Nebulette; SH3 domain, 29.7 25 0.00085 18.2 1.4 14 46-59 24-37 (64)
170 1x69_A Cortactin isoform A; SH 29.7 23 0.00079 19.5 1.4 13 46-58 35-47 (79)
171 3h0h_A Proto-oncogene tyrosine 29.7 24 0.00083 18.9 1.4 14 46-59 33-46 (73)
172 3j20_R 30S ribosomal protein S 29.6 20 0.00068 23.0 1.2 13 46-58 79-91 (113)
173 2yuq_A Tyrosine-protein kinase 29.5 22 0.00075 20.0 1.3 14 46-59 37-50 (85)
174 1x2q_A Signal transducing adap 29.0 24 0.00081 20.0 1.4 13 46-58 35-47 (88)
175 1x6b_A RHO guanine exchange fa 28.9 22 0.00075 19.7 1.2 12 47-58 36-47 (79)
176 1v1c_A Obscurin; muscle, sarco 28.8 25 0.00084 21.0 1.4 13 47-59 26-38 (71)
177 1ujy_A RHO guanine nucleotide 28.8 17 0.0006 19.8 0.7 13 46-58 28-40 (76)
178 2jxb_A T-cell surface glycopro 28.8 22 0.00075 20.1 1.2 13 46-58 49-61 (86)
179 2ke9_A Caskin-2; SH3 domain, A 28.7 23 0.00079 20.2 1.3 14 46-59 37-50 (83)
180 1uff_A Intersectin 2; beta bar 28.7 24 0.00082 20.2 1.4 13 46-58 23-35 (93)
181 2ega_A SH3 and PX domain-conta 28.7 15 0.00052 19.7 0.4 14 46-59 26-39 (70)
182 4glm_A Dynamin-binding protein 28.5 26 0.0009 18.6 1.4 14 46-59 31-44 (72)
183 2oqk_A Putative translation in 27.9 87 0.003 19.4 4.0 41 7-56 34-80 (117)
184 1u3o_A Huntingtin-associated p 27.8 24 0.00083 21.3 1.3 14 46-59 35-48 (82)
185 2jmc_A Spectrin alpha chain, b 27.7 21 0.00073 19.7 1.0 13 46-58 9-21 (77)
186 3i4o_A Translation initiation 27.7 99 0.0034 18.3 4.1 41 7-56 16-63 (79)
187 1ugv_A KIAA0621, olygophrenin- 27.3 19 0.00065 19.6 0.7 12 46-57 28-39 (72)
188 2m0y_A Dedicator of cytokinesi 27.0 25 0.00084 18.9 1.1 14 46-59 29-42 (74)
189 3rnj_A Brain-specific angiogen 26.7 29 0.00098 18.4 1.4 13 46-58 26-38 (67)
190 1udl_A Intersectin 2, KIAA1256 26.6 27 0.00092 20.1 1.3 14 46-59 52-65 (98)
191 1wxu_A Peroxisomal biogenesis 26.6 16 0.00055 20.9 0.3 14 46-59 35-48 (93)
192 1wie_A RIM binding protein 2; 26.5 29 0.00099 20.1 1.5 11 46-56 41-51 (96)
193 1q6w_A Monoamine oxidase regul 26.3 34 0.0012 20.7 1.8 15 42-56 102-116 (161)
194 2cub_A Cytoplasmic protein NCK 26.0 26 0.0009 19.9 1.2 14 46-59 35-48 (88)
195 3exz_A MAOC-like dehydratase; 26.0 31 0.0011 21.2 1.6 15 42-56 87-101 (154)
196 3bbn_Q Ribosomal protein S17; 25.8 23 0.00079 23.7 1.0 17 42-58 103-119 (142)
197 2oi3_A Tyrosine-protein kinase 25.6 30 0.001 19.2 1.4 13 47-59 44-56 (86)
198 2zkq_q 40S ribosomal protein S 25.5 26 0.00089 23.8 1.2 13 46-58 119-131 (158)
199 2xzm_Q Ribosomal protein S17 c 25.4 26 0.00088 23.7 1.2 13 46-58 115-127 (157)
200 2qfa_C Inner centromere protei 24.8 5.2 0.00018 22.7 -2.0 16 50-65 29-44 (47)
201 2yt6_A Adult MALE urinary blad 24.8 31 0.0011 20.0 1.4 14 46-59 45-58 (109)
202 2o2o_A SH3-domain kinase-bindi 24.7 29 0.00098 20.3 1.2 14 46-59 36-49 (92)
203 2csq_A RIM-BP2, RIM binding pr 24.6 32 0.0011 19.8 1.4 13 46-58 43-55 (97)
204 3u5c_L RP41, S18, YS12, 40S ri 24.6 26 0.0009 23.7 1.1 13 46-58 116-128 (156)
205 1y96_B Gemin7, SIP3, GEM-assoc 24.5 1.1E+02 0.0038 18.8 3.9 31 25-55 40-81 (85)
206 2gqi_A RAS GTPase-activating p 24.1 13 0.00046 20.1 -0.4 13 46-58 26-38 (71)
207 3d6l_A Putative hydrolase; hot 24.0 37 0.0013 19.6 1.6 14 42-55 58-71 (137)
208 1ixl_A Hypothetical protein PH 24.0 42 0.0014 19.4 1.8 14 42-55 76-89 (131)
209 3k67_A Putative dehydratase AF 23.5 39 0.0013 21.6 1.7 13 43-55 112-124 (159)
210 3ir3_A HTD2, 3-hydroxyacyl-thi 23.5 39 0.0013 20.7 1.7 15 42-56 93-107 (148)
211 2ot2_A Hydrogenase isoenzymes 23.3 74 0.0025 19.3 2.9 41 7-55 5-50 (90)
212 2dgy_A MGC11102 protein; EIF-1 23.1 1.4E+02 0.0048 18.6 4.3 43 6-57 16-64 (111)
213 2pwy_A TRNA (adenine-N(1)-)-me 23.1 21 0.00073 22.5 0.4 13 45-57 2-14 (258)
214 2bi0_A Hypothetical protein RV 22.8 38 0.0013 24.1 1.7 14 42-55 278-291 (337)
215 1bb9_A Amphiphysin 2; transfer 21.4 42 0.0014 20.4 1.5 12 46-57 62-73 (115)
216 1jt8_A EIF-1A, probable transl 21.1 1.5E+02 0.005 18.3 4.0 42 6-56 21-68 (102)
217 3bjk_A Acyl-COA thioester hydr 21.1 49 0.0017 19.4 1.7 14 42-55 67-80 (153)
218 2rqr_A CED-12 homolog, engulfm 21.1 41 0.0014 20.4 1.4 14 46-59 77-90 (119)
219 4ag1_C Fynomer; hydrolase-de n 20.9 43 0.0015 18.9 1.4 14 46-59 24-37 (84)
220 1i1j_A Melanoma derived growth 20.8 42 0.0014 20.3 1.4 13 46-58 40-52 (108)
221 3iuw_A Activating signal coint 20.8 81 0.0028 19.0 2.7 22 38-59 29-50 (83)
222 2jv2_A Putative uncharacterize 20.7 36 0.0012 20.3 1.1 11 45-55 40-50 (83)
223 2b3n_A Hypothetical protein AF 20.6 49 0.0017 20.8 1.7 15 42-56 111-125 (159)
224 1awj_A ITK; transferase, regul 20.4 17 0.00058 20.0 -0.4 14 46-59 38-51 (77)
225 2v1o_A Cytosolic acyl coenzyme 20.3 50 0.0017 19.5 1.7 14 42-55 57-70 (151)
No 1
>3u5c_c S33, YS27, 40S ribosomal protein S28-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_Y 3o30_R 3o2z_R 3u5g_c 3iz6_Y
Probab=100.00 E-value=7.9e-43 Score=214.81 Aligned_cols=66 Identities=71% Similarity=1.007 Sum_probs=60.6
Q ss_pred CCCCC-CeeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCccccCcEEEeehhHHHHhhcC
Q 037546 1 MDTGG-PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66 (66)
Q Consensus 1 md~~~-~~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGPVr~GDil~LlEsErEarrlr 66 (66)
||+.. +++|+|+||||||||+|+||||||+||+|++|+|+||||||||+||||+|+|||||||+||
T Consensus 1 m~~~~p~~~A~VikVlGRtGs~G~~tQVrv~~l~d~~r~i~RnVkGPVR~GDIl~L~EtEREarrlr 67 (67)
T 3u5c_c 1 MDNKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDILVLMESEREARRLR 67 (67)
T ss_dssp ----CCCEEEEEEEEEEEESSSCCEEEEEEEESSSCSCEEEEECSSCCCTTCEEEESSSSCCCCCCC
T ss_pred CCCCCCcEEEEEEEEecCCcCcccEEEEEEEEecCCCcEEEecccCCcccCCEEEEehhhhhhhhcC
Confidence 77633 8999999999999999999999999999999999999999999999999999999999997
No 2
>2xzm_1 Ribosomal protein S28E containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_1
Probab=100.00 E-value=5.8e-41 Score=206.97 Aligned_cols=66 Identities=58% Similarity=0.906 Sum_probs=61.8
Q ss_pred CCCCCCeeEEEEEeccccCCcCcEEEEEEEEecCC--CcEEEeeecCccccCcEEEeehhHHHHhhcC
Q 037546 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDT--KRQITRNVKGPVRVGDILTLLESEREARRLR 66 (66)
Q Consensus 1 md~~~~~~A~V~kVlGRtGs~G~~tqVrve~l~d~--~r~i~RnVkGPVr~GDil~LlEsErEarrlr 66 (66)
|+++.+++|+|+||||||||+|+||||||+||+++ +|+|+||||||||+||||+|+|||||||+||
T Consensus 1 ~~~~~~~~A~VikVlGRTGs~G~~tQVrv~~l~~~~~~R~i~RnVkGPVr~GDil~L~EteREArrlr 68 (68)
T 2xzm_1 1 MNTEETTKARIMDVLGKTGSRGGITQVRVVLISGKEEGRQLIRNVKGACRVGDVLELMECEREARRLR 68 (68)
T ss_dssp -CCCCCEEEEEEEEEEEECCCCCEEEEEEEECSSSCCSCEEEEEEESCCCTTCEEEESCSSCCCCCCC
T ss_pred CCcCcceEEEEEEEeccccCCCcEEEEEEEECcCCCCCcEEEeeccCCcccCcEEeehhhhhhhhhcC
Confidence 67755899999999999999999999999999855 9999999999999999999999999999997
No 3
>3j20_X 30S ribosomal protein S28E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=4.2e-40 Score=204.54 Aligned_cols=66 Identities=55% Similarity=0.860 Sum_probs=61.6
Q ss_pred CCCCCCeeEEEEEeccccCCcCcEEEEEEEEe--cCCCcEEEeeecCccccCcEEEeehhHHHHhhcC
Q 037546 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFM--DDTKRQITRNVKGPVRVGDILTLLESEREARRLR 66 (66)
Q Consensus 1 md~~~~~~A~V~kVlGRtGs~G~~tqVrve~l--~d~~r~i~RnVkGPVr~GDil~LlEsErEarrlr 66 (66)
|..+..++|+|+||||||||+|+||||||+|| +|++|+|+||||||||+||||+|+|||||||+|+
T Consensus 1 ~~~~~~~~A~VikVlGRTGs~G~~tQVrve~l~g~d~~R~i~RNVKGPVR~GDIl~L~EtEREArrl~ 68 (71)
T 3j20_X 1 MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRIGDILILRETEREAREIK 68 (71)
T ss_dssp CCCCCCEEEEEEEEEEECCSSCCEEEEEEEECSSSSCSCEEEEEEESCCCTTCEEEESCSSCCCCCCC
T ss_pred CCcccCceEEEEEEecCCcCCccEEEEEEEEeecCCCCCEEEeeccCCcccCcEEEeehhhHHHHhhc
Confidence 44434789999999999999999999999999 7999999999999999999999999999999985
No 4
>1ne3_A 30S ribosomal protein S28E; beta protein, structural genomics, OCSP, NESG, protein structure initiative, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: b.40.4.5
Probab=100.00 E-value=4e-40 Score=203.24 Aligned_cols=64 Identities=52% Similarity=0.827 Sum_probs=60.1
Q ss_pred CCCCCCeeEEEEEeccccCCcCcEEEEEEEEec--CCCcEEEeeecCccccCcEEEeehhHHHHhhcC
Q 037546 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66 (66)
Q Consensus 1 md~~~~~~A~V~kVlGRtGs~G~~tqVrve~l~--d~~r~i~RnVkGPVr~GDil~LlEsErEarrlr 66 (66)
|+. .++|+|+||||||||+|+||||||+||+ |++|+|+||||||||+||||+|+|||||||+|+
T Consensus 1 ~~~--~~~A~V~kVlGRTGs~G~~tQVrv~~l~~~~~~R~i~RnVkGPVR~GDil~L~EtEREArrl~ 66 (68)
T 1ne3_A 1 MDD--ATPAEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMGPIREGDILMLLDTIREAKEIR 66 (68)
T ss_dssp CCC--SEEEEEEEEECCSSSSSSSEEEEEEESSSSSCSCEEEEEECSCCCTTCEEEECCCCCCCCCCC
T ss_pred CCC--ceEEEEEEEeCcccCcCcEEEEEEEEccCCCCCcEEEeeccCCcccCcEEEehhhhHHHhhcc
Confidence 454 5899999999999999999999999997 569999999999999999999999999999986
No 5
>1ny4_A 30S ribosomal protein S28E; JR19, structure, autostructure, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Pyrococcus horikoshii} SCOP: b.40.4.5
Probab=100.00 E-value=1.6e-39 Score=206.35 Aligned_cols=66 Identities=56% Similarity=0.877 Sum_probs=60.8
Q ss_pred CCCCCCeeEEEEEeccccCCcCcEEEEEEEEec--CCCcEEEeeecCccccCcEEEeehhHHHHhhcC
Q 037546 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMD--DTKRQITRNVKGPVRVGDILTLLESEREARRLR 66 (66)
Q Consensus 1 md~~~~~~A~V~kVlGRtGs~G~~tqVrve~l~--d~~r~i~RnVkGPVr~GDil~LlEsErEarrlr 66 (66)
|....+++|+|+||||||||+|+||||||+||+ |++|+|+||||||||+||||+|+|||||||+|+
T Consensus 1 m~~~~~~~A~VikVlGRTGs~G~~TQVrVe~l~~~~~~R~i~RNVKGPVR~GDIL~LlEtEREArrl~ 68 (82)
T 1ny4_A 1 MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIK 68 (82)
T ss_dssp CCCCSSCEEEEEEECCCCCSSSSEEEEEEEESSSSSCSCEEEEEEESCCCTTCEEECSCCCCCCCCCS
T ss_pred CCcccceeEEEEEEeCcccCcCcEEEEEEEEccCCCCCcEEEeeccCCcccCcEEeehhhHHHHHHHh
Confidence 443338999999999999999999999999997 569999999999999999999999999999985
No 6
>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5
Probab=57.19 E-value=5.6 Score=23.57 Aligned_cols=14 Identities=14% Similarity=0.273 Sum_probs=11.8
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
|.+.||++||.|..
T Consensus 68 ~F~~Pv~~Gd~l~~ 81 (121)
T 2f41_A 68 RFTRQVKQGERVVA 81 (121)
T ss_dssp EECSCCBTTCEEEE
T ss_pred EEeCCcCCCCEEEE
Confidence 66789999998865
No 7
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=56.66 E-value=30 Score=20.79 Aligned_cols=47 Identities=19% Similarity=0.180 Sum_probs=29.3
Q ss_pred eEEEEEeccc-cCCcCc---EEEEEEEEecCCCcEEEeeecCccccCcEEEee
Q 037546 8 KATVIKVIGR-TGSRGQ---VTQVRVQFMDDTKRQITRNVKGPVRVGDILTLL 56 (66)
Q Consensus 8 ~A~V~kVlGR-tGs~G~---~tqVrve~l~d~~r~i~RnVkGPVr~GDil~Ll 56 (66)
.|+|.++--. ....|. +.. +.|-|+++.+-..-+.-.+.+||++.+.
T Consensus 19 ~~~V~~~~~~~~~k~G~~~~v~~--~~l~DeTG~I~~tlW~~~l~~Gdvv~i~ 69 (106)
T 2k75_A 19 IGKITGIHKKEYESDGTTKSVYQ--GYIEDDTARIRISSFGKQLQDSDVVRID 69 (106)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEE--EEEECSSCEEEEEEESSCCCTTEEEEEE
T ss_pred EEEEEEccccccccCCCeeEEEE--EEEEcCCCeEEEEEEcCccCCCCEEEEE
Confidence 3677666433 333343 433 5555788876555554449999999886
No 8
>3u5c_R RP51A, 40S ribosomal protein S17-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_Q 3o30_K 3o2z_K 3u5g_R
Probab=56.04 E-value=2 Score=28.92 Aligned_cols=21 Identities=52% Similarity=0.707 Sum_probs=17.5
Q ss_pred eecCccccCcEEEeehhHHHHh
Q 037546 42 NVKGPVRVGDILTLLESEREAR 63 (66)
Q Consensus 42 nVkGPVr~GDil~LlEsErEar 63 (66)
--+|||| |=-+-|.|.|||-|
T Consensus 61 iq~Gpvr-gisiklqEeERerr 81 (136)
T 3u5c_R 61 IQKGPVR-GISFKLQEEERERK 81 (136)
T ss_dssp HTTSCBT-TBCCSHHHHHHHTT
T ss_pred cccCCcc-cceeehhHHHHHHh
Confidence 3489999 88889999999965
No 9
>1wjj_A Hypothetical protein F20O9.120; DNA-binding protein-related, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.40.4.3
Probab=52.61 E-value=43 Score=21.78 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=25.1
Q ss_pred cCcEEEEEEEEecCCCcEEEeeecCc---cccCcEEEeeh
Q 037546 21 RGQVTQVRVQFMDDTKRQITRNVKGP---VRVGDILTLLE 57 (66)
Q Consensus 21 ~G~~tqVrve~l~d~~r~i~RnVkGP---Vr~GDil~LlE 57 (66)
.+.+.++.| =|+++++..-.+.-. +.+||++.|..
T Consensus 60 ~~~V~~~lV--gDeTG~I~ftlW~e~~~~l~~Gd~v~i~n 97 (145)
T 1wjj_A 60 PSRIVECLI--GDETGCILFTARNDQVDLMKPGATVILRN 97 (145)
T ss_dssp CCCCEEEEE--ECSSCEEEEEECTTHHHHTCTTCEEEEEE
T ss_pred CceEEEEEE--EcCCcEEEEEEecCCcCcCCCCCEEEEec
Confidence 778888644 378887766655543 78999998864
No 10
>1zld_A PTR TOXA, PTR necrosis toxin; beta-sandwich, RGD-motif; 1.65A {Pyrenophora tritici-repentis} PDB: 1zle_A
Probab=51.87 E-value=15 Score=23.80 Aligned_cols=43 Identities=33% Similarity=0.546 Sum_probs=33.4
Q ss_pred eccccCCcCcEE---------------EEEEEEec--CCCcEEEeeecCccccCcEEEee
Q 037546 14 VIGRTGSRGQVT---------------QVRVQFMD--DTKRQITRNVKGPVRVGDILTLL 56 (66)
Q Consensus 14 VlGRtGs~G~~t---------------qVrve~l~--d~~r~i~RnVkGPVr~GDil~Ll 56 (66)
+|||.|+-|... .|||.+-. -.+|.|+-.+.-.|--||+-.|.
T Consensus 28 ilgrpgaigswelnnfitiglnrvnadtvrvnirntgrtnrliitqwdntvtrgdvyelf 87 (118)
T 1zld_A 28 ILGRPGAIGSWELNNFITIGLNRVNADTVRVNIRNTGRTNRLIITQWDNTVTRGDVYELF 87 (118)
T ss_dssp HTSCTTCEEEEECSSSEEEEEEEEETTEEEEEEEECSSCEEEEEEEEEECSSSCEEEEEE
T ss_pred EecCCCccceEEecceEEEeecccccceEEEEeeeCCccceEEEEeecCceeeccHHhhh
Confidence 589999888642 46777664 56688999999999999998764
No 11
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=50.55 E-value=6 Score=24.33 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=14.0
Q ss_pred EeeecCccccCcEEEe
Q 037546 40 TRNVKGPVRVGDILTL 55 (66)
Q Consensus 40 ~RnVkGPVr~GDil~L 55 (66)
.+++.|-|++||++.+
T Consensus 3 ~~~~~~~l~~G~v~vV 18 (93)
T 1dgw_Y 3 LRRYAATLSEGDIIVI 18 (93)
T ss_dssp EEEEEEEECTTCEEEE
T ss_pred cchhhceecCCcEEEE
Confidence 4789999999999976
No 12
>2jov_A Hypothetical protein CPE0013; alpha + beta sandwich, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens} SCOP: d.349.1.1
Probab=50.49 E-value=6.3 Score=24.41 Aligned_cols=13 Identities=23% Similarity=0.516 Sum_probs=11.1
Q ss_pred eecCccccCcEEE
Q 037546 42 NVKGPVRVGDILT 54 (66)
Q Consensus 42 nVkGPVr~GDil~ 54 (66)
.|+-||+.||+|.
T Consensus 45 ~V~APV~iGDVIi 57 (85)
T 2jov_A 45 YVGVPTKSGNVVC 57 (85)
T ss_dssp EECCCCCSSEEEE
T ss_pred EEcCCcccCCEEE
Confidence 4788999999985
No 13
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=48.02 E-value=8.6 Score=19.74 Aligned_cols=14 Identities=29% Similarity=0.717 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 18 s~~~Gd~i~v~~~~ 31 (54)
T 2a28_A 18 SIDPGDIITVIRGD 31 (54)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEEEec
Confidence 46899999998754
No 14
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=47.10 E-value=10 Score=19.89 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=11.2
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 19 s~~~Gd~i~v~~~ 31 (60)
T 1i07_A 19 SVMKDDVLEILDD 31 (60)
T ss_dssp CBCTTCEEEECGG
T ss_pred cCCCCCEEEEEEc
Confidence 4789999999986
No 15
>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} SCOP: d.38.1.5
Probab=46.86 E-value=9.8 Score=24.22 Aligned_cols=14 Identities=14% Similarity=0.273 Sum_probs=11.7
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
+.+.||++||.|.+
T Consensus 104 ~F~rPV~~GD~L~a 117 (157)
T 2f3x_A 104 RFTRQVKQGERVVA 117 (157)
T ss_dssp EECSCCBTTCEEEE
T ss_pred EEeCCCCCCCEEEE
Confidence 56789999998865
No 16
>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; FABZ, hot DOG fold, dehydratase, lipid biosynthesis, lipid synthesis, lyase; HET: MSE; 2.59A {Campylobacter jejuni subsp}
Probab=46.86 E-value=9.7 Score=23.00 Aligned_cols=13 Identities=46% Similarity=0.769 Sum_probs=10.7
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
.+.||++||.|.+
T Consensus 97 f~~pV~pGd~l~~ 109 (146)
T 3d6x_A 97 FRNPVRPGDRLDY 109 (146)
T ss_dssp ECSCCCTTCEEEE
T ss_pred ECcccCCCCEEEE
Confidence 3599999999865
No 17
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=46.72 E-value=9.2 Score=19.69 Aligned_cols=14 Identities=29% Similarity=0.748 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 1zuy_A 19 PLKKGDVIYITREE 32 (58)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEec
Confidence 36899999998864
No 18
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=46.05 E-value=9.4 Score=20.26 Aligned_cols=14 Identities=57% Similarity=0.845 Sum_probs=11.6
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 39 sf~~Gd~i~v~~~~ 52 (62)
T 1g2b_A 39 TMKKGDILTLLNST 52 (62)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 47899999999853
No 19
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=45.74 E-value=9.7 Score=19.66 Aligned_cols=14 Identities=21% Similarity=0.283 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (59)
T 1yn8_A 19 RLAEGDIVFISYKH 32 (59)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999998753
No 20
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=45.36 E-value=9.5 Score=21.24 Aligned_cols=14 Identities=36% Similarity=0.608 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 24 s~~~Gd~i~v~~~~ 37 (65)
T 2lj0_A 24 ELRDGDIVDVMEKC 37 (65)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEeEeC
Confidence 58999999998754
No 21
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=45.33 E-value=9.8 Score=19.96 Aligned_cols=13 Identities=62% Similarity=0.912 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 19 s~~~Gd~i~v~~~ 31 (65)
T 2oaw_A 19 TMKKGDILTLLNS 31 (65)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEc
Confidence 4789999999985
No 22
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=44.86 E-value=10 Score=19.65 Aligned_cols=13 Identities=23% Similarity=0.616 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 20 s~~~Gd~i~v~~~ 32 (60)
T 2v1q_A 20 TIKSGDKVYILDD 32 (60)
T ss_dssp CBCTTCEEEEEES
T ss_pred cCCCCCEEEEEeC
Confidence 4789999999885
No 23
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=44.69 E-value=10 Score=19.98 Aligned_cols=13 Identities=31% Similarity=0.567 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 23 s~~~Gd~i~v~~~ 35 (62)
T 1k4u_S 23 EFQEGDIILVLSK 35 (62)
T ss_dssp CBCSSCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 4789999999985
No 24
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=44.61 E-value=10 Score=19.76 Aligned_cols=13 Identities=46% Similarity=0.986 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 21 s~~~Gd~i~v~~~ 33 (60)
T 1oot_A 21 PFRKGDVITILKK 33 (60)
T ss_dssp CBCTTCEEEEEEC
T ss_pred eEcCCCEEEEEEe
Confidence 4789999999875
No 25
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=44.51 E-value=46 Score=19.48 Aligned_cols=46 Identities=28% Similarity=0.410 Sum_probs=25.3
Q ss_pred eEEEEEec------cccCCcCcEEEEEEEEecCCCcEEE--eeecC--ccccCcEEEe
Q 037546 8 KATVIKVI------GRTGSRGQVTQVRVQFMDDTKRQIT--RNVKG--PVRVGDILTL 55 (66)
Q Consensus 8 ~A~V~kVl------GRtGs~G~~tqVrve~l~d~~r~i~--RnVkG--PVr~GDil~L 55 (66)
.|+|+.+- .+-|+.|.+.. +.+.|+++.+-+ .|-+. .+.+||++.+
T Consensus 17 ~~~V~~~~~~r~~~~~~G~~~~v~~--~~l~DeTG~I~~tlW~~~~~~~i~~Gdvv~i 72 (97)
T 3e0e_A 17 NAEVVTAYPKKEFSRKDGTKGQLKS--LFLKDDTGSIRGTLWNELADFEVKKGDIAEV 72 (97)
T ss_dssp EEEEEEECCCEEEC----CCEEEEE--EEEEETTEEEEEEEEGGGGGCCCCTTCEEEE
T ss_pred EEEEEECCCceEEEcCCCCeeEEEE--EEEECCCCcEEEEEECCccccccCCCCEEEE
Confidence 45666653 22455555555 444577774422 33222 6999999987
No 26
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=44.16 E-value=11 Score=19.51 Aligned_cols=14 Identities=29% Similarity=0.745 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 20 s~~~Gd~i~v~~~~ 33 (58)
T 1sem_A 20 AFKRGDVITLINKD 33 (58)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEec
Confidence 47899999998853
No 27
>2xzm_V RPS17E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_V
Probab=44.13 E-value=4.3 Score=27.04 Aligned_cols=20 Identities=60% Similarity=0.818 Sum_probs=16.7
Q ss_pred ecCccccCcEEEeehhHHHHh
Q 037546 43 VKGPVRVGDILTLLESEREAR 63 (66)
Q Consensus 43 VkGPVr~GDil~LlEsErEar 63 (66)
-+|||| |=-+-|.|.|||-|
T Consensus 62 q~gpvr-gis~klqEeererr 81 (130)
T 2xzm_V 62 QKGPVR-GISLKVQEEERERR 81 (130)
T ss_dssp TTSCCT-TCCCTTTTHHHHHT
T ss_pred ccCccc-ccccchhHHHHHhh
Confidence 479997 77789999999965
No 28
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=44.04 E-value=11 Score=19.64 Aligned_cols=13 Identities=15% Similarity=0.056 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 18 s~~~Gd~i~v~~~ 30 (58)
T 1jo8_A 18 TFVENDKIINIEF 30 (58)
T ss_dssp CBCTTCEEEEEEC
T ss_pred ccCCCCEEEEEEe
Confidence 4688999999885
No 29
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=43.92 E-value=10 Score=20.34 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+.++||+|.+++.
T Consensus 28 sf~~Gd~i~v~~~ 40 (70)
T 1gcq_C 28 RLNPGDIVELTKA 40 (70)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CcCCCCEEEEEeC
Confidence 3789999999986
No 30
>1qd7_I S17 ribosomal protein; 30S ribosomal subunit, low resolution model, ribosome; 5.50A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1eg0_G 1rip_A
Probab=43.72 E-value=17 Score=22.27 Aligned_cols=21 Identities=24% Similarity=0.513 Sum_probs=15.8
Q ss_pred EEEeeecCccccCcEEEeehh
Q 037546 38 QITRNVKGPVRVGDILTLLES 58 (66)
Q Consensus 38 ~i~RnVkGPVr~GDil~LlEs 58 (66)
+...+-.--+++||++.+.||
T Consensus 41 ~~aHDe~n~~k~GD~V~I~E~ 61 (89)
T 1qd7_I 41 YKAHDEHNEAKVGDIVKIMET 61 (89)
T ss_pred EEEeCCccCCCCCCEEEEEEc
Confidence 334444457999999999998
No 31
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=43.06 E-value=11 Score=19.39 Aligned_cols=14 Identities=36% Similarity=0.731 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (57)
T 1cka_A 19 PFKKGDILRIRDKP 32 (57)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEec
Confidence 37899999998753
No 32
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=48.98 E-value=5.1 Score=26.39 Aligned_cols=37 Identities=35% Similarity=0.601 Sum_probs=27.1
Q ss_pred EEEEEEEEecCCCcEEE--eeecCccccCcEEEeehhHH
Q 037546 24 VTQVRVQFMDDTKRQIT--RNVKGPVRVGDILTLLESER 60 (66)
Q Consensus 24 ~tqVrve~l~d~~r~i~--RnVkGPVr~GDil~LlEsEr 60 (66)
...|||.|-.+++.+++ .++|||+++|..+.....+.
T Consensus 32 ~vKcKV~~k~~~~~~~v~d~~ikG~l~vG~~ve~~~~~~ 70 (118)
T 2lcd_A 32 LVKVKVLLKQDNTTQLVQDDQVKGPLRVGAIVETRTSDG 70 (118)
Confidence 34667777666665543 57899999999998887654
No 33
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=42.82 E-value=11 Score=19.51 Aligned_cols=13 Identities=38% Similarity=0.611 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 20 s~~~Gd~i~v~~~ 32 (58)
T 1zx6_A 20 GLKPGDKVQLLEK 32 (58)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 4789999999875
No 34
>3r8n_Q 30S ribosomal protein S17; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_Q 3fih_Q* 3iy8_Q 3j18_Q* 2wwl_Q 3oar_Q 3oaq_Q 3ofb_Q 3ofa_Q 3ofp_Q 3ofx_Q 3ofy_Q 3ofo_Q 3r8o_Q 4a2i_Q 4gd1_Q 4gd2_Q 3i1m_Q 1vs7_Q* 3e1a_J ...
Probab=42.67 E-value=9.2 Score=23.01 Aligned_cols=14 Identities=21% Similarity=0.534 Sum_probs=12.5
Q ss_pred CccccCcEEEeehh
Q 037546 45 GPVRVGDILTLLES 58 (66)
Q Consensus 45 GPVr~GDil~LlEs 58 (66)
--+++||++.+.||
T Consensus 48 n~~~~GD~V~I~e~ 61 (80)
T 3r8n_Q 48 NECGIGDVVEIREC 61 (80)
T ss_dssp GCCCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEe
Confidence 46899999999997
No 35
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=42.58 E-value=11 Score=19.55 Aligned_cols=13 Identities=38% Similarity=0.506 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 21 s~~~Gd~i~v~~~ 33 (60)
T 2x3w_D 21 SFKAGDELTKLGE 33 (60)
T ss_dssp CBCTTCEEEECSC
T ss_pred cCCCCCEEEEEEc
Confidence 4789999999875
No 36
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=42.42 E-value=12 Score=19.80 Aligned_cols=14 Identities=21% Similarity=0.515 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (65)
T 1w1f_A 25 SFKKGEKMKVLEEH 38 (65)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999998754
No 37
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.31 E-value=11 Score=20.26 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=11.6
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++.+
T Consensus 25 s~~~Gd~i~v~~~~ 38 (68)
T 1wxb_A 25 SVLKDEVLEVLEDG 38 (68)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999999863
No 38
>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagel unknown function; HET: MSE; 2.60A {Campylobacter jejuni}
Probab=42.27 E-value=13 Score=23.34 Aligned_cols=14 Identities=36% Similarity=0.752 Sum_probs=11.4
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
|-+.||++||.|.+
T Consensus 95 ~F~~PV~~GD~L~a 108 (152)
T 3bnv_A 95 FFYAPLKLGDVLEL 108 (152)
T ss_dssp EECSCCBTTCEEEE
T ss_pred EEeCCCCCCCEEEE
Confidence 55789999998865
No 39
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=42.24 E-value=12 Score=19.38 Aligned_cols=13 Identities=31% Similarity=0.693 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 19 s~~~Gd~i~v~~~ 31 (58)
T 1uti_A 19 GFRSGEVVEVLDS 31 (58)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEE
Confidence 4789999999875
No 40
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=42.21 E-value=12 Score=19.73 Aligned_cols=13 Identities=31% Similarity=0.534 Sum_probs=11.0
Q ss_pred cccCcEEEeehhH
Q 037546 47 VRVGDILTLLESE 59 (66)
Q Consensus 47 Vr~GDil~LlEsE 59 (66)
++.||+|.+++.+
T Consensus 25 ~~~Gd~i~v~~~~ 37 (62)
T 2iim_A 25 FEKGEQLRILEQS 37 (62)
T ss_dssp BCTTCEEEEEECC
T ss_pred CCCCCEEEEEEcC
Confidence 6899999999863
No 41
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=42.08 E-value=12 Score=19.78 Aligned_cols=13 Identities=23% Similarity=0.700 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 23 s~~~Gd~i~v~~~ 35 (62)
T 1uj0_A 23 TFKHGELITVLDD 35 (62)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999875
No 42
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=41.91 E-value=12 Score=19.28 Aligned_cols=14 Identities=14% Similarity=0.437 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 21 s~~~Gd~i~v~~~~ 34 (58)
T 2drm_A 21 TFKEGDTIIVHQKD 34 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 47899999998763
No 43
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=41.88 E-value=12 Score=20.14 Aligned_cols=14 Identities=36% Similarity=0.726 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 21 s~~~Gd~i~v~~~~ 34 (69)
T 1ruw_A 21 PLKKGDIVFISRDE 34 (69)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred cCCCCCEEEEEEec
Confidence 37899999998753
No 44
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=41.88 E-value=12 Score=19.42 Aligned_cols=14 Identities=36% Similarity=0.688 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 2bz8_A 19 TISVGEIITNIRKE 32 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eECCCCEEEEEEeC
Confidence 47899999998853
No 45
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=41.66 E-value=12 Score=19.39 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 21 s~~~Gd~i~v~~~ 33 (58)
T 1zlm_A 21 YFEEGDIIYITDM 33 (58)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEe
Confidence 3689999999875
No 46
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=41.07 E-value=13 Score=19.54 Aligned_cols=13 Identities=23% Similarity=0.332 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (60)
T 2gnc_A 24 SFKKGASLLLYHR 36 (60)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999875
No 47
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=41.03 E-value=12 Score=20.62 Aligned_cols=14 Identities=36% Similarity=0.596 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+.++||+|.+++.+
T Consensus 36 sf~~Gd~i~v~~~~ 49 (78)
T 1k1z_A 36 RLNPGDIVELTKAE 49 (78)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEcC
Confidence 37899999998863
No 48
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=40.79 E-value=13 Score=20.17 Aligned_cols=14 Identities=29% Similarity=0.593 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++.+
T Consensus 26 s~~~Gd~i~v~~~~ 39 (68)
T 2k2m_A 26 SVKQRDVLEVLDDS 39 (68)
T ss_dssp CBCTTCEEEEEECS
T ss_pred cCCCCCEEEEEEcC
Confidence 47899999999863
No 49
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=40.72 E-value=10 Score=20.99 Aligned_cols=14 Identities=29% Similarity=0.579 Sum_probs=11.8
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 22 s~~~Gd~i~v~~~~ 35 (60)
T 2lx7_A 22 RFAAGELITLLQVP 35 (60)
T ss_dssp CCCTTCEEEBSCCC
T ss_pred cCCCCCEEEEeEec
Confidence 68899999998754
No 50
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=40.58 E-value=13 Score=19.90 Aligned_cols=14 Identities=57% Similarity=0.845 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 7 s~~~Gd~i~v~~~~ 20 (63)
T 1tuc_A 7 TMKKGDILTLLNST 20 (63)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 46889999998753
No 51
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=40.54 E-value=13 Score=19.14 Aligned_cols=13 Identities=23% Similarity=0.621 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 20 s~~~Gd~i~v~~~ 32 (58)
T 2vwf_A 20 GFRRGDFIHVMDN 32 (58)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEc
Confidence 4688999999875
No 52
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=40.38 E-value=13 Score=20.14 Aligned_cols=14 Identities=36% Similarity=0.731 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 21 sf~~Gd~i~v~~~~ 34 (65)
T 1b07_A 21 PFKKGDILRIRDKP 34 (65)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCcCCCEEEEEEec
Confidence 47899999999853
No 53
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=40.34 E-value=13 Score=19.59 Aligned_cols=13 Identities=31% Similarity=0.664 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (64)
T 2jte_A 24 TFREGEIIHLISK 36 (64)
T ss_dssp CBCTTCEEEEEES
T ss_pred CCCCCCEEEEEEC
Confidence 4789999999875
No 54
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=40.08 E-value=13 Score=20.03 Aligned_cols=14 Identities=29% Similarity=0.468 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++.+
T Consensus 25 s~~~Gd~i~v~~~~ 38 (68)
T 1wxt_A 25 TVVQGEKLEVLDHS 38 (68)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999999863
No 55
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=39.94 E-value=13 Score=19.29 Aligned_cols=14 Identities=21% Similarity=0.453 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 22 s~~~Gd~i~v~~~~ 35 (59)
T 2g6f_X 22 SFSKGDVIHVTRVE 35 (59)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEec
Confidence 36899999998753
No 56
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=39.72 E-value=13 Score=19.54 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 19 s~~~Gd~i~v~~~ 31 (62)
T 2j6f_A 19 TIRVGEIIRNVKK 31 (62)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCcCCCEEEEEEe
Confidence 4789999999875
No 57
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=39.70 E-value=14 Score=19.40 Aligned_cols=13 Identities=15% Similarity=0.199 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 21 s~~~Gd~i~v~~~ 33 (61)
T 1y0m_A 21 TFTKSAIIQNVEK 33 (61)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCcCCCEEEEEEe
Confidence 4688999999875
No 58
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.63 E-value=13 Score=20.05 Aligned_cols=13 Identities=62% Similarity=0.940 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 2dl4_A 25 EMRPGDIITLLED 37 (68)
T ss_dssp CCCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999985
No 59
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.60 E-value=13 Score=19.95 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 25 s~~~Gd~i~vl~~~ 38 (70)
T 2ct4_A 25 SMAEGEDLSLMEED 38 (70)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEecc
Confidence 47899999999753
No 60
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=39.25 E-value=14 Score=19.36 Aligned_cols=14 Identities=29% Similarity=0.532 Sum_probs=11.2
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 22 s~~~Gd~i~v~~~~ 35 (60)
T 1w70_A 22 NFKAGDVIFLLSRI 35 (60)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred cCCCCCEEEEEEeC
Confidence 36899999998753
No 61
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=38.99 E-value=14 Score=19.75 Aligned_cols=14 Identities=14% Similarity=0.256 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (70)
T 2cuc_A 25 DLQKGEGIRVLGKY 38 (70)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEEec
Confidence 47899999999753
No 62
>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A*
Probab=38.93 E-value=15 Score=23.57 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=10.8
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
.+.||++||.|.+
T Consensus 121 F~~pV~PGD~L~i 133 (171)
T 2gll_A 121 FRIPVTPGDRLEY 133 (171)
T ss_dssp ECSCCCTTCEEEE
T ss_pred ECCccCCCCEEEE
Confidence 3599999999875
No 63
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=38.73 E-value=14 Score=19.75 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 20 s~~~Gd~i~v~~~~ 33 (67)
T 1gl5_A 20 RLERGQEYIILEKN 33 (67)
T ss_dssp CBCTTCEEEEEECS
T ss_pred cCCcCCEEEEEEcc
Confidence 47899999998863
No 64
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=38.64 E-value=14 Score=19.67 Aligned_cols=13 Identities=31% Similarity=0.733 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 2dl3_A 25 PLQKGDIVYIYKQ 37 (68)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCCCCEEEEeEe
Confidence 3689999999875
No 65
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=38.50 E-value=15 Score=23.42 Aligned_cols=14 Identities=29% Similarity=0.558 Sum_probs=11.9
Q ss_pred ecCccccCcEEEee
Q 037546 43 VKGPVRVGDILTLL 56 (66)
Q Consensus 43 VkGPVr~GDil~Ll 56 (66)
.++||++||.|.|.
T Consensus 74 F~~~V~PGD~l~l~ 87 (129)
T 3esi_A 74 FQQPILPGKTLRLV 87 (129)
T ss_dssp ECSCCCTTCEEEEE
T ss_pred ECcccCCCCEEEEE
Confidence 47999999999874
No 66
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=38.45 E-value=13 Score=19.89 Aligned_cols=14 Identities=50% Similarity=0.866 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 21 s~~~Gd~i~v~~~~ 34 (69)
T 1wyx_A 21 SFRKGDIMTVLEQD 34 (69)
T ss_dssp CBCTTCEEEEEETT
T ss_pred CCcCCCEEEEeECC
Confidence 47899999999864
No 67
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=38.38 E-value=14 Score=20.18 Aligned_cols=13 Identities=38% Similarity=0.608 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 21 sf~~Gd~i~v~~~ 33 (68)
T 2ew3_A 21 GFKEGDIITLTNQ 33 (68)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999885
No 68
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=38.37 E-value=14 Score=19.74 Aligned_cols=13 Identities=23% Similarity=0.616 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (71)
T 2jt4_A 24 TIKSGDKVYILDD 36 (71)
T ss_dssp CBCTTCEEEEEES
T ss_pred cCCCCCEEEEEEC
Confidence 4788999999885
No 69
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=38.35 E-value=13 Score=20.48 Aligned_cols=13 Identities=8% Similarity=0.268 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 28 sf~~Gd~i~v~~~ 40 (76)
T 2ed1_A 28 TFIEGEVIIVTGE 40 (76)
T ss_dssp CCCSSCEEEESSC
T ss_pred CcCCCCEEEEEEe
Confidence 4789999999974
No 70
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=38.28 E-value=11 Score=19.49 Aligned_cols=14 Identities=21% Similarity=0.548 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 1zuu_A 19 TITPGDKISLVARD 32 (58)
T ss_dssp CBCTTCCEEEEECC
T ss_pred cCCCCCEEEEeEcC
Confidence 46899999998754
No 71
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.23 E-value=14 Score=19.76 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 1x2p_A 25 SFLRGEKILILRQ 37 (68)
T ss_dssp CCCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEc
Confidence 3688999999875
No 72
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=38.22 E-value=14 Score=20.12 Aligned_cols=14 Identities=57% Similarity=0.845 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 17 s~~~Gd~i~v~~~~ 30 (73)
T 2kxd_A 17 TMKKGDILTLLNST 30 (73)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eEcCCCEEEEEEec
Confidence 47899999999753
No 73
>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydra fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 3az8_A* 3az9_A* 3aza_A* 3azb_A* 1zhg_A 2oki_A 2okh_A
Probab=38.15 E-value=16 Score=22.44 Aligned_cols=13 Identities=54% Similarity=0.680 Sum_probs=10.8
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
.+.||+.||.|.+
T Consensus 103 F~~pV~pGd~l~~ 115 (154)
T 1z6b_A 103 WKKPVLPGDTLTM 115 (154)
T ss_dssp ECSCCCTTCEEEE
T ss_pred EccccCCCCEEEE
Confidence 4589999998875
No 74
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=38.12 E-value=15 Score=19.30 Aligned_cols=14 Identities=21% Similarity=0.154 Sum_probs=11.1
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 21 s~~~Gd~i~v~~~~ 34 (62)
T 2fpe_A 21 ELEVDDPLLVELQA 34 (62)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred cCCCCCEEEEEEec
Confidence 46899999998653
No 75
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=38.00 E-value=15 Score=20.26 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 33 s~~~Gd~i~v~~~~ 46 (80)
T 2v1r_A 33 ALKKGDLMAILSKK 46 (80)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred cCCCCCEEEEEECC
Confidence 47899999998854
No 76
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=37.95 E-value=16 Score=23.51 Aligned_cols=13 Identities=46% Similarity=0.496 Sum_probs=11.2
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
.++||++||.|.+
T Consensus 107 F~~~V~PGd~L~i 119 (160)
T 4h4g_A 107 FKRVVEPGDQLIL 119 (160)
T ss_dssp ECSCCCTTCEEEE
T ss_pred ECcccCCCCEEEE
Confidence 5799999999876
No 77
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.82 E-value=14 Score=19.79 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 1x2k_A 25 YFEEGDIIYITDM 37 (68)
T ss_dssp CCCSSCEEEEEEC
T ss_pred cCCCCCEEEEEEc
Confidence 3689999999875
No 78
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=37.77 E-value=13 Score=19.82 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 28 s~~~Gd~i~v~~~~ 41 (68)
T 1s1n_A 28 TFKKGEILLVIEKK 41 (68)
T ss_dssp CBCSSEEEEECSCC
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999998864
No 79
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=37.73 E-value=15 Score=20.30 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.6
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++.+
T Consensus 22 sf~~Gd~i~vl~~~ 35 (67)
T 2b86_A 22 DIKKNERLWLLDDS 35 (67)
T ss_dssp CBCTTCEEEEEECS
T ss_pred ccCCCCEEEEEecC
Confidence 47899999999863
No 80
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.69 E-value=14 Score=19.79 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (70)
T 2ct3_A 25 ELREGDRVDVMQQ 37 (70)
T ss_dssp CBCTTEEEEEEEE
T ss_pred cCCCCCEEEEEEE
Confidence 4789999999875
No 81
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=37.68 E-value=15 Score=19.52 Aligned_cols=13 Identities=15% Similarity=0.330 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (65)
T 2j05_A 24 SFLKGDMFIVHNE 36 (65)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEeEe
Confidence 4789999999875
No 82
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.62 E-value=15 Score=20.00 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 27 s~~~Gd~i~v~~~ 39 (72)
T 2dl8_A 27 SFKKGASLLLYQR 39 (72)
T ss_dssp CBCTTCEEEEEEE
T ss_pred ccCCCCEEEEEee
Confidence 4789999999875
No 83
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=37.50 E-value=15 Score=19.10 Aligned_cols=14 Identities=14% Similarity=0.537 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 23 s~~~Gd~i~v~~~~ 36 (60)
T 2xmf_A 23 SFNANDIIDIIKED 36 (60)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEec
Confidence 37899999998853
No 84
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=37.48 E-value=15 Score=19.69 Aligned_cols=14 Identities=29% Similarity=0.560 Sum_probs=11.1
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 21 sf~~Gd~i~v~~~~ 34 (67)
T 2bzy_A 21 ALEVGDIVKVTRMN 34 (67)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred ccCCCCEEEEEEec
Confidence 36889999998753
No 85
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.43 E-value=14 Score=20.44 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++.+
T Consensus 27 s~~~Gd~i~vl~~~ 40 (75)
T 2egc_A 27 GFQEGVSMEVLERN 40 (75)
T ss_dssp CBCTTCEEEECEEC
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999999865
No 86
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=37.36 E-value=13 Score=19.96 Aligned_cols=13 Identities=38% Similarity=0.805 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (70)
T 2da9_A 25 TIKEGDIVTLINK 37 (70)
T ss_dssp CCCTTEEEEEEEC
T ss_pred eEcCCCEEEEEEC
Confidence 4789999999875
No 87
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.32 E-value=15 Score=19.95 Aligned_cols=13 Identities=23% Similarity=0.473 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 26 sf~~Gd~i~v~~~ 38 (73)
T 2dl7_A 26 SFPEGAIIRILNK 38 (73)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEC
Confidence 4789999999975
No 88
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=37.27 E-value=13 Score=20.47 Aligned_cols=14 Identities=43% Similarity=0.741 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 27 s~~~Gd~i~v~~~~ 40 (74)
T 1gbq_A 27 SFKRGDILKVLNEE 40 (74)
T ss_dssp CBCTTCEEECCBCS
T ss_pred eEcCCCEEEEeEec
Confidence 47899999998753
No 89
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=37.19 E-value=15 Score=19.65 Aligned_cols=13 Identities=23% Similarity=0.422 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 2djq_A 25 KFNKGDVILLRRQ 37 (68)
T ss_dssp CCCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEe
Confidence 3689999999875
No 90
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=37.16 E-value=15 Score=19.64 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 26 s~~~Gd~i~v~~~ 38 (69)
T 2dil_A 26 DLSAGDILEVILE 38 (69)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEC
Confidence 4789999999986
No 91
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=37.14 E-value=15 Score=19.63 Aligned_cols=13 Identities=38% Similarity=0.611 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (67)
T 2kxc_A 25 SFAQGDVITLLIP 37 (67)
T ss_dssp CBCTTCEEEESSS
T ss_pred cCCCCCEEEEeEC
Confidence 4789999999974
No 92
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=37.14 E-value=15 Score=20.17 Aligned_cols=13 Identities=38% Similarity=0.805 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 20 s~~~Gd~i~vl~~ 32 (69)
T 2ydl_A 20 TIKEGDIVTLINK 32 (69)
T ss_dssp CBCTTCEEEEEES
T ss_pred ccCCCCEEEEEEc
Confidence 4789999999875
No 93
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=37.10 E-value=16 Score=19.26 Aligned_cols=13 Identities=23% Similarity=0.478 Sum_probs=10.9
Q ss_pred cccCcEEEeehhH
Q 037546 47 VRVGDILTLLESE 59 (66)
Q Consensus 47 Vr~GDil~LlEsE 59 (66)
++.||+|.+++..
T Consensus 25 ~~~Gd~i~v~~~~ 37 (64)
T 2ak5_A 25 FSKGDVIHVTRVE 37 (64)
T ss_dssp BCTTCEEEEEECC
T ss_pred CCCCCEEEEeEec
Confidence 6899999998753
No 94
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=37.10 E-value=16 Score=19.64 Aligned_cols=13 Identities=8% Similarity=0.069 Sum_probs=10.8
Q ss_pred cccCcEEEeehhH
Q 037546 47 VRVGDILTLLESE 59 (66)
Q Consensus 47 Vr~GDil~LlEsE 59 (66)
+++||+|.+++..
T Consensus 26 f~~Gd~i~v~~~~ 38 (68)
T 1tg0_A 26 FEKDQEIIVTSVE 38 (68)
T ss_dssp BCTTCEEEEEEEC
T ss_pred CCCCCEEEEEEec
Confidence 6899999998753
No 95
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=36.78 E-value=16 Score=19.82 Aligned_cols=13 Identities=38% Similarity=0.805 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 27 s~~~Gd~i~v~~~ 39 (73)
T 2k9g_A 27 TIKEGDIVTLINK 39 (73)
T ss_dssp CBCTTCEEEEEEC
T ss_pred eECCCCEEEEEEC
Confidence 4789999999875
No 96
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=36.77 E-value=14 Score=19.86 Aligned_cols=14 Identities=14% Similarity=0.494 Sum_probs=11.2
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 26 s~~~Gd~i~v~~~~ 39 (67)
T 2eyx_A 26 ALEVGELVKVTKIN 39 (67)
T ss_dssp CBCSSEEEEEEEEC
T ss_pred ccCCCCEEEEEEec
Confidence 47899999998753
No 97
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=36.76 E-value=16 Score=20.01 Aligned_cols=13 Identities=38% Similarity=0.501 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 28 s~~~Gd~i~v~~~ 40 (74)
T 1j3t_A 28 NFSKHDIITVLEQ 40 (74)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEec
Confidence 4789999999986
No 98
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=36.58 E-value=15 Score=24.56 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=14.0
Q ss_pred ecCccccCcEEEeehhH
Q 037546 43 VKGPVRVGDILTLLESE 59 (66)
Q Consensus 43 VkGPVr~GDil~LlEsE 59 (66)
.-||...||+++|-..-
T Consensus 155 ~Y~Pl~~~Dvv~LP~~~ 171 (188)
T 3anw_A 155 EYGPFMAGDMAIIPTVI 171 (188)
T ss_dssp EECCBCTTCEEEEEHHH
T ss_pred cccCCCcccEEeecHHH
Confidence 45899999999997653
No 99
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=36.57 E-value=16 Score=19.69 Aligned_cols=12 Identities=42% Similarity=0.814 Sum_probs=10.5
Q ss_pred ccccCcEEEeeh
Q 037546 46 PVRVGDILTLLE 57 (66)
Q Consensus 46 PVr~GDil~LlE 57 (66)
+++.||+|.+++
T Consensus 29 s~~~Gd~i~v~~ 40 (71)
T 1csk_A 29 PFCKGDVLTIVA 40 (71)
T ss_dssp CBCTTCEEEEEE
T ss_pred CCCCCCEEEEeE
Confidence 378999999998
No 100
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=36.44 E-value=16 Score=20.24 Aligned_cols=14 Identities=29% Similarity=0.377 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 31 s~~~Gd~i~vl~~~ 44 (79)
T 1uhc_A 31 SVSANQKLKILEFK 44 (79)
T ss_dssp CBCTTCEEEEEESC
T ss_pred CCCCCCEEEEEECC
Confidence 47899999999853
No 101
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.33 E-value=16 Score=20.11 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 32 sf~~Gd~i~v~~~ 44 (76)
T 2csi_A 32 TFCTGDIITVFGE 44 (76)
T ss_dssp CCCTTCEEEEESS
T ss_pred cCCCCCEEEEeEe
Confidence 3689999999975
No 102
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=36.32 E-value=16 Score=19.99 Aligned_cols=13 Identities=23% Similarity=0.406 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (72)
T 2jw4_A 25 DIKKNERLWLLDD 37 (72)
T ss_dssp CCCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEC
Confidence 4789999999985
No 103
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=36.30 E-value=16 Score=20.11 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (78)
T 2yuo_A 25 GFRKNDIITIISQ 37 (78)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEe
Confidence 4789999999974
No 104
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=36.27 E-value=15 Score=19.80 Aligned_cols=13 Identities=46% Similarity=0.641 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 26 s~~~Gd~i~v~~~ 38 (72)
T 1spk_A 26 SFAQGDVLTLLIP 38 (72)
T ss_dssp CBCTTCEEEECCS
T ss_pred cCCCCCEEEEeEc
Confidence 3789999999964
No 105
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.27 E-value=14 Score=19.85 Aligned_cols=14 Identities=29% Similarity=0.439 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (68)
T 2dmo_A 25 QVMPGNIVFVLKKG 38 (68)
T ss_dssp CCCTTCEEEECEEC
T ss_pred CCCCCCEEEEEEeC
Confidence 47899999998753
No 106
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=36.26 E-value=16 Score=20.34 Aligned_cols=13 Identities=62% Similarity=0.912 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 20 s~~~Gd~i~v~~~ 32 (80)
T 2pqh_A 20 TMKKGDILTLLNS 32 (80)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999985
No 107
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.21 E-value=14 Score=20.40 Aligned_cols=13 Identities=46% Similarity=0.690 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 28 s~~~Gd~i~v~~~ 40 (76)
T 2epd_A 28 SFRRGDVLRLHER 40 (76)
T ss_dssp EECTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4689999999885
No 108
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.07 E-value=16 Score=20.50 Aligned_cols=14 Identities=43% Similarity=0.729 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 35 sf~~Gd~i~v~~~~ 48 (81)
T 1x6g_A 35 AFRKGDVVTILEAC 48 (81)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEecc
Confidence 47899999998853
No 109
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.02 E-value=16 Score=20.21 Aligned_cols=14 Identities=14% Similarity=0.432 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 35 sf~~Gd~i~v~~~~ 48 (78)
T 2ed0_A 35 SFQEGAIIYVIKKN 48 (78)
T ss_dssp CBCSSCEEEEEEEC
T ss_pred cccCCCEEEEEEeC
Confidence 37899999998753
No 110
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.01 E-value=16 Score=19.65 Aligned_cols=13 Identities=8% Similarity=0.184 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 26 s~~~Gd~i~v~~~ 38 (71)
T 2dnu_A 26 GFEKGVTVEVIRK 38 (71)
T ss_dssp CBCTTCEEEECCC
T ss_pred cCCCCCEEEEeEC
Confidence 3789999999875
No 111
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.85 E-value=14 Score=20.19 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (73)
T 2dm1_A 25 SLREGDVVRIYSRI 38 (73)
T ss_dssp CBCTTCEEECCBSS
T ss_pred CCCCCCEEEEEEec
Confidence 47899999998753
No 112
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.82 E-value=16 Score=20.45 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 35 s~~~Gd~i~v~~~ 47 (79)
T 2cud_A 35 IFRRGEKLRVISD 47 (79)
T ss_dssp SSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEec
Confidence 4789999999983
No 113
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.81 E-value=16 Score=20.11 Aligned_cols=14 Identities=29% Similarity=0.522 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (79)
T 2yun_A 25 NLEKGDIVIIHEKK 38 (79)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEcC
Confidence 47899999998753
No 114
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.45 E-value=15 Score=20.39 Aligned_cols=13 Identities=23% Similarity=0.532 Sum_probs=10.9
Q ss_pred cccCcEEEeehhH
Q 037546 47 VRVGDILTLLESE 59 (66)
Q Consensus 47 Vr~GDil~LlEsE 59 (66)
+++||+|.+++..
T Consensus 36 f~~Gd~i~v~~~~ 48 (80)
T 2d8h_A 36 FQAGDRITVISKT 48 (80)
T ss_dssp ECTTCEEEEEECC
T ss_pred EcCCCEEEEeECc
Confidence 6889999998753
No 115
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=35.10 E-value=17 Score=19.78 Aligned_cols=14 Identities=36% Similarity=0.520 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 31 s~~~Gd~i~v~~~~ 44 (73)
T 3c0c_A 31 GFREGDLITLTNQI 44 (73)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred cCcCCCEEEEEEec
Confidence 37899999998853
No 116
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=34.91 E-value=18 Score=19.62 Aligned_cols=13 Identities=23% Similarity=0.493 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 19 s~~~Gd~i~v~~~ 31 (65)
T 2nwm_A 19 TLQKGDIVYIHKE 31 (65)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCcCCCEEEEEEe
Confidence 4789999999875
No 117
>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis}
Probab=34.89 E-value=19 Score=22.41 Aligned_cols=13 Identities=38% Similarity=0.429 Sum_probs=10.7
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
.++||++||.|.+
T Consensus 103 F~~pV~PGd~L~i 115 (152)
T 4i83_A 103 FKRQVIPGDQLVF 115 (152)
T ss_dssp ECSCCCTTCEEEE
T ss_pred EccccCCCCEEEE
Confidence 3799999999855
No 118
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=34.82 E-value=16 Score=19.75 Aligned_cols=13 Identities=8% Similarity=0.220 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 26 s~~~Gd~i~v~~~ 38 (69)
T 1uhf_A 26 TFTEGEEILVTQK 38 (69)
T ss_dssp CBCTTCEEEECEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999875
No 119
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=34.69 E-value=17 Score=20.03 Aligned_cols=13 Identities=15% Similarity=0.506 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (80)
T 1ue9_A 25 SLAPGQLILILKK 37 (80)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999885
No 120
>3iz6_Q 40S ribosomal protein S17 (S17E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=34.42 E-value=3.1 Score=28.16 Aligned_cols=22 Identities=59% Similarity=0.798 Sum_probs=17.0
Q ss_pred eeecCccccCcEEEeehhHHHHh
Q 037546 41 RNVKGPVRVGDILTLLESEREAR 63 (66)
Q Consensus 41 RnVkGPVr~GDil~LlEsErEar 63 (66)
|--+|||| |=-+-|.|.|||-|
T Consensus 60 riq~Gpvr-gisiklqEeERerr 81 (141)
T 3iz6_Q 60 RIQRGPVR-GISLKLQEEERERR 81 (141)
T ss_dssp HHCSCCCC-CSSCCSSCCCCCSC
T ss_pred ccccCCcc-ccceehhHHHHHHH
Confidence 44589997 77788889998854
No 121
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=34.35 E-value=13 Score=20.21 Aligned_cols=13 Identities=38% Similarity=0.731 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (77)
T 2d8j_A 25 SFRAGDKLQVLDT 37 (77)
T ss_dssp CBCTTCCEEEEEC
T ss_pred CCCCCCEEEEEEC
Confidence 4789999999986
No 122
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=34.34 E-value=14 Score=19.66 Aligned_cols=14 Identities=36% Similarity=0.520 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 26 s~~~Gd~i~v~~~~ 39 (67)
T 1aww_A 26 QLRKGDEYFILEES 39 (67)
T ss_dssp CCCSSCEEECCCCC
T ss_pred cCCCCCEEEEEEcc
Confidence 36889999998753
No 123
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=34.28 E-value=17 Score=20.44 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 26 sf~~Gd~i~Vl~~~ 39 (69)
T 1nm7_A 26 ALKKGDLMAILSKK 39 (69)
T ss_dssp CCCTTCEEEECCSS
T ss_pred CCCCCCEEEEEecC
Confidence 46899999998864
No 124
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=34.01 E-value=18 Score=19.92 Aligned_cols=13 Identities=23% Similarity=0.672 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 29 s~~~Gd~i~v~~~ 41 (73)
T 2ebp_A 29 KLKKGDIIDIISK 41 (73)
T ss_dssp CBCSSCEEEEEEC
T ss_pred CCCCCCEEEEEEe
Confidence 4689999999885
No 125
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=33.95 E-value=19 Score=18.31 Aligned_cols=14 Identities=21% Similarity=0.364 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 4e6r_A 19 SLVXGSRVTVMEXC 32 (58)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred eEeCCCEEEEeEcC
Confidence 57899999998754
No 126
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=33.85 E-value=14 Score=19.77 Aligned_cols=14 Identities=14% Similarity=0.247 Sum_probs=11.2
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (69)
T 2eqi_A 25 TFCRGALIHNVSKE 38 (69)
T ss_dssp CBCTTCEEESCCCC
T ss_pred CCCCCCEEEEEEcC
Confidence 36889999998753
No 127
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=33.83 E-value=15 Score=20.01 Aligned_cols=13 Identities=38% Similarity=0.746 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 19 s~~~Gd~i~v~~~ 31 (65)
T 2fei_A 19 ELKVGDIIDINEE 31 (65)
T ss_dssp CCCTTCEEECCCC
T ss_pred CCCCCCEEEEEEe
Confidence 4788999999875
No 128
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=33.80 E-value=24 Score=22.31 Aligned_cols=10 Identities=20% Similarity=0.152 Sum_probs=8.1
Q ss_pred CeeEEEEEec
Q 037546 6 PKKATVIKVI 15 (66)
Q Consensus 6 ~~~A~V~kVl 15 (66)
.-|++|++|.
T Consensus 25 aIP~kVveI~ 34 (103)
T 3d3r_A 25 SIPSQVVAVD 34 (103)
T ss_dssp CCCEEEEEEE
T ss_pred ecCEEEEEEe
Confidence 4589999996
No 129
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=33.74 E-value=22 Score=20.45 Aligned_cols=15 Identities=47% Similarity=0.443 Sum_probs=11.8
Q ss_pred eecCccccCcEEEee
Q 037546 42 NVKGPVRVGDILTLL 56 (66)
Q Consensus 42 nVkGPVr~GDil~Ll 56 (66)
+...||..||.|.+.
T Consensus 83 rf~~Pv~~Gd~l~~~ 97 (134)
T 1iq6_A 83 SFKLPVFVGDEVTAE 97 (134)
T ss_dssp EECSCCBTTCEEEEE
T ss_pred EEcCCCCCCCEEEEE
Confidence 456899999988764
No 130
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=33.73 E-value=18 Score=19.77 Aligned_cols=14 Identities=29% Similarity=0.541 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 28 s~~~Gd~i~v~~~~ 41 (77)
T 2enm_A 28 TVTEGEIITVTNPN 41 (77)
T ss_dssp CCCTTCEEEEEESC
T ss_pred cCCCCCEEEEeEcc
Confidence 37899999999853
No 131
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=33.71 E-value=17 Score=20.30 Aligned_cols=14 Identities=29% Similarity=0.553 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
.+++||+|.+++..
T Consensus 28 sf~~Gd~i~v~~~~ 41 (80)
T 2i0n_A 28 PFKRNDIITITFKD 41 (80)
T ss_dssp CBCSSEEEEEEEES
T ss_pred CCCCCCEEEEEEec
Confidence 47899999998864
No 132
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.70 E-value=20 Score=19.77 Aligned_cols=12 Identities=25% Similarity=0.653 Sum_probs=10.2
Q ss_pred ccccCcEEEeeh
Q 037546 46 PVRVGDILTLLE 57 (66)
Q Consensus 46 PVr~GDil~LlE 57 (66)
+.+.||+|.+++
T Consensus 32 sf~~Gd~i~v~~ 43 (75)
T 2ege_A 32 ALRAGDVVMVYG 43 (75)
T ss_dssp CBCTTCEEEEES
T ss_pred eECCCCEEEEeE
Confidence 378999999986
No 133
>2vqe_Q 30S ribosomal protein S17; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: b.40.4.5 PDB: 1gix_T* 1hnw_Q* 1hnx_Q* 1hnz_Q* 1hr0_Q 1ibk_Q* 1ibl_Q* 1ibm_Q 1jgo_T* 1jgp_T* 1jgq_T* 1ml5_T* 1xmo_Q* 1xmq_Q* 1xnq_Q* 1xnr_Q* 1yl4_T 2b64_Q* 2b9m_Q* 2b9o_Q* ...
Probab=33.64 E-value=15 Score=23.22 Aligned_cols=15 Identities=27% Similarity=0.682 Sum_probs=12.9
Q ss_pred cCccccCcEEEeehh
Q 037546 44 KGPVRVGDILTLLES 58 (66)
Q Consensus 44 kGPVr~GDil~LlEs 58 (66)
.--+++||++.+.||
T Consensus 48 ~n~~k~GD~V~I~E~ 62 (105)
T 2vqe_Q 48 EEKYKLGDVVEIIES 62 (105)
T ss_dssp TCCCCTTCEEEEEEE
T ss_pred CCCCCCCCEEEEEEc
Confidence 346899999999998
No 134
>3dm3_A Replication factor A; probably plays AN essential for replication of the chromosome, DNA recombination and repair; 2.40A {Methanocaldococcus jannaschii}
Probab=33.62 E-value=79 Score=18.96 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=22.3
Q ss_pred cccCCcCcEEEEEEEEecCCCcEEEeee-----c-CccccCcEEEe
Q 037546 16 GRTGSRGQVTQVRVQFMDDTKRQITRNV-----K-GPVRVGDILTL 55 (66)
Q Consensus 16 GRtGs~G~~tqVrve~l~d~~r~i~RnV-----k-GPVr~GDil~L 55 (66)
.+.|+.|.+.. +.+.|+.+.+ |-. . =++.+||++.+
T Consensus 34 ~~~G~~~~v~~--~~l~D~TG~I--rvtlW~~~a~~~l~~Gdvv~i 75 (105)
T 3dm3_A 34 RADGSIGKLKS--FIVRDETGSI--RVTLWDNLTDIDVGRGDYVRV 75 (105)
T ss_dssp CTTSCEEEEEE--EEEEETTEEE--EEEEEGGGGGSCCCTTCEEEE
T ss_pred cCCCCeeEEEE--EEEECCCCcE--EEEEECcccccccCCCCEEEE
Confidence 44666666655 4556877743 322 1 17899999987
No 135
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=33.60 E-value=19 Score=19.43 Aligned_cols=14 Identities=21% Similarity=0.154 Sum_probs=11.1
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 24 s~~~Gd~i~v~~~~ 37 (71)
T 2fpf_A 24 ELEVDDPLLVELQA 37 (71)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred cCcCCcEEEEeEec
Confidence 47899999998653
No 136
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.57 E-value=17 Score=20.12 Aligned_cols=14 Identities=14% Similarity=0.427 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 31 s~~~Gd~i~v~~~~ 44 (78)
T 2dl5_A 31 TIEEHEVLEVIEDG 44 (78)
T ss_dssp CBCSSEEEEEEECC
T ss_pred CCCCCCEEEEEecc
Confidence 37899999999864
No 137
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=33.43 E-value=16 Score=19.86 Aligned_cols=14 Identities=36% Similarity=0.501 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 25 s~~~Gd~i~v~~~~ 38 (73)
T 2dbm_A 25 GFKEGDIITLTNQI 38 (73)
T ss_dssp CBCTTCEEECCBCS
T ss_pred cCCCCCEEEEEEec
Confidence 36899999998753
No 138
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.14 E-value=21 Score=20.35 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=11.6
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++.+
T Consensus 34 s~~~Gd~i~v~~~~ 47 (94)
T 2e5k_A 34 ELVPGDFIFMSPME 47 (94)
T ss_dssp CBCTTCEEEECGGG
T ss_pred CCCCCCEEEEEECc
Confidence 37899999999863
No 139
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=33.05 E-value=20 Score=18.55 Aligned_cols=13 Identities=23% Similarity=0.404 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 23 s~~~Gd~i~v~~~ 35 (63)
T 3eg3_A 23 SITKGEKLRVLGY 35 (63)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 5789999999973
No 140
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.02 E-value=19 Score=20.04 Aligned_cols=14 Identities=21% Similarity=0.328 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 26 s~~~Gd~i~vl~~~ 39 (80)
T 2ekh_A 26 SFPAGVEVQVLEKQ 39 (80)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CcCCCCEEEEEEeC
Confidence 47899999999754
No 141
>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4
Probab=33.01 E-value=21 Score=21.37 Aligned_cols=15 Identities=27% Similarity=0.392 Sum_probs=12.1
Q ss_pred eecCccccCcEEEee
Q 037546 42 NVKGPVRVGDILTLL 56 (66)
Q Consensus 42 nVkGPVr~GDil~Ll 56 (66)
..+.||..||.|.+.
T Consensus 95 rF~~PV~~Gd~l~~~ 109 (151)
T 2c2i_A 95 RFPAPVPVGSRVRAT 109 (151)
T ss_dssp ECCSCCBTTCEEEEE
T ss_pred EECCCcCCCCEEEEE
Confidence 457899999998764
No 142
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=32.89 E-value=20 Score=19.94 Aligned_cols=12 Identities=8% Similarity=0.387 Sum_probs=10.7
Q ss_pred cccCcEEEeehh
Q 037546 47 VRVGDILTLLES 58 (66)
Q Consensus 47 Vr~GDil~LlEs 58 (66)
+++||+|.+++.
T Consensus 36 ~~~Gd~i~v~~~ 47 (81)
T 1x43_A 36 LLADEVITVFSV 47 (81)
T ss_dssp CCTTCEEEEECC
T ss_pred CCCCCEEEEEEc
Confidence 688999999986
No 143
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=32.85 E-value=17 Score=20.41 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 23 s~~~Gd~i~vl~~~ 36 (79)
T 3cqt_A 23 SFHKGEKFQILNSS 36 (79)
T ss_dssp CBCTTCEEEEEECT
T ss_pred CCCCCCEEEEEEec
Confidence 36899999999754
No 144
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.85 E-value=14 Score=19.79 Aligned_cols=13 Identities=54% Similarity=0.784 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (71)
T 2cre_A 25 AFSRGDILTILEQ 37 (71)
T ss_dssp CCCSSCCEEEEES
T ss_pred CCCCCCEEEEeEc
Confidence 3689999999886
No 145
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=32.81 E-value=21 Score=19.21 Aligned_cols=13 Identities=15% Similarity=0.286 Sum_probs=10.8
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 sf~~Gd~i~v~~~ 37 (70)
T 2vkn_A 25 SFEQNEILQVSDI 37 (70)
T ss_dssp CBCTTCEEEEECT
T ss_pred cCCCCCEEEEEEc
Confidence 3689999999875
No 146
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=32.73 E-value=20 Score=18.71 Aligned_cols=14 Identities=29% Similarity=0.283 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 27 s~~~Gd~i~v~~~~ 40 (65)
T 3ulr_B 27 SFDPDDIITNIEMI 40 (65)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eEecCCEEEEEEec
Confidence 57889999998753
No 147
>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6
Probab=32.72 E-value=21 Score=22.53 Aligned_cols=13 Identities=46% Similarity=0.672 Sum_probs=10.9
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
.+.||++||.|.+
T Consensus 117 F~~pV~pGD~L~~ 129 (168)
T 1u1z_A 117 FRQPVLPGDQLQL 129 (168)
T ss_dssp ECSCCCTTCEEEE
T ss_pred ECCcCCCCCEEEE
Confidence 4689999999866
No 148
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=32.50 E-value=1.1e+02 Score=20.23 Aligned_cols=43 Identities=21% Similarity=0.315 Sum_probs=30.1
Q ss_pred CeeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCccc------cCcEEEeeh
Q 037546 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVR------VGDILTLLE 57 (66)
Q Consensus 6 ~~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGPVr------~GDil~LlE 57 (66)
...|+|++.+| -..++|++. .+..++-.+.|=.| .||++.+.=
T Consensus 32 e~~g~V~e~lg-------n~~f~V~l~--nG~~~La~I~GKmRk~IwI~~GD~VlVe~ 80 (143)
T 1d7q_A 32 QEYAQVIKMLG-------NGRLEAMCF--DGVKRLCHIRGKLRKKVWINTSDIILVGL 80 (143)
T ss_dssp EEEEEEEEECS-------SSEEEEEET--TTEEEEEECCSGGGGSCCCCTTCEEEEEC
T ss_pred EEEEEEEEEcC-------CCEEEEEeC--CCCEEEEEecccceeeEEecCCCEEEEee
Confidence 46899999998 234666653 46777777777754 788877643
No 149
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=32.31 E-value=20 Score=20.61 Aligned_cols=14 Identities=57% Similarity=0.845 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 35 sf~~Gd~i~Vl~~~ 48 (83)
T 1neg_A 35 TMKKGDILTLLNST 48 (83)
T ss_dssp CBCTTCEEEEEECC
T ss_pred ccCCCCEEEEEEec
Confidence 47899999999853
No 150
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=32.29 E-value=21 Score=18.99 Aligned_cols=13 Identities=38% Similarity=0.623 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (67)
T 2o9s_A 24 SFRKGERITLLRQ 36 (67)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 3689999999875
No 151
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=32.17 E-value=14 Score=19.83 Aligned_cols=13 Identities=31% Similarity=0.728 Sum_probs=10.8
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 1wi7_A 25 ELKVGDIIEVVGE 37 (68)
T ss_dssp CBCTTCEECCCEE
T ss_pred cCcCCCEEEEEEc
Confidence 4789999999875
No 152
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=31.81 E-value=21 Score=20.25 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 33 sf~~Gd~i~v~~~~ 46 (92)
T 1jqq_A 33 ALKKGDLMAILSKK 46 (92)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEECC
Confidence 47899999998754
No 153
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.78 E-value=20 Score=20.16 Aligned_cols=13 Identities=31% Similarity=0.580 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 26 sf~~Gd~i~v~~~ 38 (85)
T 2dlp_A 26 SFHRGDLIKLLPV 38 (85)
T ss_dssp CBCTTCEEEECCC
T ss_pred cCcCCCEEEEEEc
Confidence 4789999999974
No 154
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.72 E-value=21 Score=20.27 Aligned_cols=14 Identities=29% Similarity=0.560 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 36 sf~~Gd~i~v~~~~ 49 (88)
T 2dbk_A 36 ALEVGDIVKVTRMN 49 (88)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred cCCCCCEEEEEEec
Confidence 37899999998764
No 155
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=31.70 E-value=22 Score=18.34 Aligned_cols=14 Identities=64% Similarity=0.888 Sum_probs=11.6
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 24 s~~~Gd~i~v~~~~ 37 (62)
T 3ngp_A 24 TVKKGDILTLLNST 37 (62)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEeEec
Confidence 57899999998853
No 156
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.40 E-value=19 Score=20.44 Aligned_cols=13 Identities=23% Similarity=0.519 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 35 sf~~Gd~i~v~~~ 47 (90)
T 2yup_A 35 SFRKGEHICLIRK 47 (90)
T ss_dssp CCCTTCEEEESSC
T ss_pred CCCCCCEEEEEEE
Confidence 3789999999975
No 157
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=31.39 E-value=21 Score=19.94 Aligned_cols=13 Identities=31% Similarity=0.784 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 35 sf~~Gd~i~Vl~~ 47 (72)
T 2l0a_A 35 TFKAGEIITVLDD 47 (72)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999974
No 158
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=31.30 E-value=22 Score=19.08 Aligned_cols=14 Identities=57% Similarity=0.845 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 23 s~~~Gd~i~v~~~~ 36 (73)
T 3thk_A 23 TMKKGDILTLLNST 36 (73)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEECC
Confidence 57899999998753
No 159
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=31.30 E-value=1.2e+02 Score=20.55 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=28.3
Q ss_pred CCCCCCeeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCccc------cCcEEEee
Q 037546 1 MDTGGPKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVR------VGDILTLL 56 (66)
Q Consensus 1 md~~~~~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGPVr------~GDil~Ll 56 (66)
|-.+....++|+++.+ +...|.|+ + .+..+....+|-.+ .||.+.+.
T Consensus 1 ~~~~~~~~g~v~~~~~------~~~~~~v~--~-~~~~~~~~~~~~~~~~~~~~vGD~V~~~ 53 (302)
T 2yv5_A 1 MGKKELKRGLVVDREA------QMIGVYLF--E-DGKTYRGIPRGKVLKKTKIYAGDYVWGE 53 (302)
T ss_dssp CCSCCCEEEEEEEEET------TEEEEEET--T-TCCEEEEEECSSSTTSSCCCBTCEEEEE
T ss_pred CCCCCceeEEEEEeeC------CeEEEEEe--c-CCEEEEEEEcCCcccCCCCcCceEEEEE
Confidence 3333356799998876 33334444 2 34455566666544 79998874
No 160
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=31.17 E-value=22 Score=19.66 Aligned_cols=14 Identities=21% Similarity=0.283 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 23 s~~~Gd~i~v~~~~ 36 (73)
T 2lcs_A 23 RLAEGDIVFISYKH 36 (73)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CCcCCCEEEEEEEc
Confidence 37899999998754
No 161
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=31.04 E-value=22 Score=18.90 Aligned_cols=13 Identities=23% Similarity=0.506 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (69)
T 4esr_A 24 TIHRGDIIRVFFK 36 (69)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 5789999999875
No 162
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=30.87 E-value=21 Score=20.17 Aligned_cols=13 Identities=15% Similarity=0.452 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 35 s~~~Gd~i~v~~~ 47 (91)
T 1wx6_A 35 NFEKGETMEVIEK 47 (91)
T ss_dssp CCCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEC
Confidence 3789999999986
No 163
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=30.84 E-value=16 Score=19.63 Aligned_cols=13 Identities=15% Similarity=0.452 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 24 s~~~Gd~i~v~~~ 36 (71)
T 1u5s_A 24 NFEKGETMEVIEK 36 (71)
T ss_dssp CCCSSCCEEEEEC
T ss_pred cCCCCCEEEEEEC
Confidence 4789999999986
No 164
>1ah9_A IF1, initiation factor 1; ribosome binding, protein-RNA interaction, OB fold; NMR {Escherichia coli} SCOP: b.40.4.5
Probab=30.80 E-value=74 Score=17.77 Aligned_cols=40 Identities=23% Similarity=0.463 Sum_probs=28.1
Q ss_pred eEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCccc-------cCcEEEee
Q 037546 8 KATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVR-------VGDILTLL 56 (66)
Q Consensus 8 ~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGPVr-------~GDil~Ll 56 (66)
.++|++.+| +..-.|.+ +.+..+...++|=.| +||.+.+.
T Consensus 9 ~G~Vi~~lg-----~~~y~V~~----~~g~~~~~~i~Gk~Rk~~i~i~vGD~V~ve 55 (71)
T 1ah9_A 9 QGTVLETLP-----NTMFRVEL----ENGHVVTAHISGKMRKNYIRILTGDKVTVE 55 (71)
T ss_dssp CEEEEEECS-----SSEEEEEE----TTSCEEEEEECSSGGGTTCCCCTTCEECCE
T ss_pred EEEEEEEeC-----CcEEEEEE----CCCCEEEEEEcceEeccCccCCCCCEEEEE
Confidence 588888887 23444432 236778888888887 69999875
No 165
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=30.75 E-value=23 Score=18.35 Aligned_cols=13 Identities=38% Similarity=0.746 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (65)
T 3u23_A 25 ELKVGDIIDINEE 37 (65)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 5789999999875
No 166
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=30.20 E-value=22 Score=20.63 Aligned_cols=14 Identities=29% Similarity=0.577 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 47 sf~~GD~I~Vl~~~ 60 (89)
T 2rf0_A 47 TLRRGDRVQVLSQD 60 (89)
T ss_dssp CBCTTCEEEEEECC
T ss_pred ccCCCCEEEEEecc
Confidence 47899999999863
No 167
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.12 E-value=22 Score=19.69 Aligned_cols=13 Identities=23% Similarity=0.772 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 28 s~~~Gd~i~v~~~ 40 (81)
T 2ysq_A 28 AFKAGDVIKVLDA 40 (81)
T ss_dssp CCCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEE
Confidence 3689999999875
No 168
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=29.86 E-value=14 Score=19.80 Aligned_cols=13 Identities=38% Similarity=0.623 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 25 s~~~Gd~i~v~~~ 37 (70)
T 2ecz_A 25 SFRKGERITLLRQ 37 (70)
T ss_dssp CCCTTCBCEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999875
No 169
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=29.72 E-value=25 Score=18.17 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=11.2
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 24 s~~~Gd~i~v~~~~ 37 (64)
T 4f14_A 24 SFRDGDYIVNVQPI 37 (64)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEeC
Confidence 57899999988753
No 170
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.71 E-value=23 Score=19.54 Aligned_cols=13 Identities=31% Similarity=0.373 Sum_probs=10.8
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 35 s~~~Gd~i~v~~~ 47 (79)
T 1x69_A 35 SFDPDDIITNIEM 47 (79)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CcCCCCEEEEeEe
Confidence 3789999999875
No 171
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=29.67 E-value=24 Score=18.89 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
.+++||+|.+++..
T Consensus 33 s~~~Gd~i~v~~~~ 46 (73)
T 3h0h_A 33 SFHKGEKFQILNSS 46 (73)
T ss_dssp CBCTTCEEEEEECS
T ss_pred eEeCCCEEEEEEec
Confidence 57899999998753
No 172
>3j20_R 30S ribosomal protein S17P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=29.59 E-value=20 Score=23.00 Aligned_cols=13 Identities=31% Similarity=0.557 Sum_probs=11.8
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
-+++||++.+.||
T Consensus 79 ~~~vGD~V~I~E~ 91 (113)
T 3j20_R 79 NAKVGDKVLIAET 91 (113)
T ss_dssp CCCTTSEEEEEEC
T ss_pred CCCCCCEEEEEec
Confidence 4899999999997
No 173
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.50 E-value=22 Score=19.97 Aligned_cols=14 Identities=29% Similarity=0.425 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 37 s~~~Gd~i~v~~~~ 50 (85)
T 2yuq_A 37 ALRRNEEYCLLDSS 50 (85)
T ss_dssp CCCBTEEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 37899999998754
No 174
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.03 E-value=24 Score=19.95 Aligned_cols=13 Identities=23% Similarity=0.652 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 35 sf~~Gd~i~v~~~ 47 (88)
T 1x2q_A 35 TFKHGEIIIVLDD 47 (88)
T ss_dssp CCCSSCEEEEEEC
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999985
No 175
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.90 E-value=22 Score=19.69 Aligned_cols=12 Identities=17% Similarity=0.509 Sum_probs=10.5
Q ss_pred cccCcEEEeehh
Q 037546 47 VRVGDILTLLES 58 (66)
Q Consensus 47 Vr~GDil~LlEs 58 (66)
+++||+|.+++.
T Consensus 36 ~~~Gd~i~v~~~ 47 (79)
T 1x6b_A 36 LQQADVVLVLQQ 47 (79)
T ss_dssp CCTTEEEEEEEE
T ss_pred CCCCCEEEEEEe
Confidence 689999999875
No 176
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=28.80 E-value=25 Score=21.04 Aligned_cols=13 Identities=23% Similarity=0.583 Sum_probs=11.4
Q ss_pred cccCcEEEeehhH
Q 037546 47 VRVGDILTLLESE 59 (66)
Q Consensus 47 Vr~GDil~LlEsE 59 (66)
+++||++.++|..
T Consensus 26 lk~Gd~VeVl~k~ 38 (71)
T 1v1c_A 26 LREGQYVEVLDAA 38 (71)
T ss_dssp BCTTCEEEEEEEE
T ss_pred ecCCCEEEEEEcC
Confidence 8999999999864
No 177
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=28.80 E-value=17 Score=19.85 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=10.9
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 28 s~~~Gd~i~v~~~ 40 (76)
T 1ujy_A 28 SVCKGDIIYVTRV 40 (76)
T ss_dssp CBCSSCCEEESSC
T ss_pred cCCCCCEEEEEEe
Confidence 4789999999875
No 178
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=28.77 E-value=22 Score=20.14 Aligned_cols=13 Identities=23% Similarity=0.406 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 49 s~~~Gd~i~v~~~ 61 (86)
T 2jxb_A 49 DIKKNERLWLLDD 61 (86)
T ss_dssp CCCTTEEEEEEEC
T ss_pred ccCCCCEEEEEec
Confidence 4789999999985
No 179
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=28.75 E-value=23 Score=20.20 Aligned_cols=14 Identities=50% Similarity=0.880 Sum_probs=11.2
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 37 sf~~GDiI~V~~~~ 50 (83)
T 2ke9_A 37 NVRAGDVITVLEQH 50 (83)
T ss_dssp CBCTTCEEEESCSS
T ss_pred cccCCCEEEEEEec
Confidence 36889999998754
No 180
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=28.69 E-value=24 Score=20.18 Aligned_cols=13 Identities=31% Similarity=0.498 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
.++.||+|.+++.
T Consensus 23 sf~~Gd~i~v~~~ 35 (93)
T 1uff_A 23 SFNSGDIIQVDEK 35 (93)
T ss_dssp CBCTTCEEEECSS
T ss_pred CCCCCCEEEEeEc
Confidence 4789999999875
No 181
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.65 E-value=15 Score=19.73 Aligned_cols=14 Identities=14% Similarity=0.648 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 26 s~~~Gd~i~v~~~~ 39 (70)
T 2ega_A 26 SLQAGEVVDVIEKN 39 (70)
T ss_dssp CCCTTCBCEEEEEC
T ss_pred cCCCCCEEEEEEcc
Confidence 36889999999853
No 182
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=28.51 E-value=26 Score=18.56 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
.++.||+|.+++..
T Consensus 31 s~~~Gd~i~v~~~~ 44 (72)
T 4glm_A 31 DFEVGDKIRILATL 44 (72)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEcc
Confidence 57899999998753
No 183
>2oqk_A Putative translation initiation factor EIF-1A; malaria, eukaryotic initiation facto SGC, structural genomics; 1.80A {Cryptosporidium parvum iowa II}
Probab=27.88 E-value=87 Score=19.44 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=28.4
Q ss_pred eeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCccc------cCcEEEee
Q 037546 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPVR------VGDILTLL 56 (66)
Q Consensus 7 ~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGPVr------~GDil~Ll 56 (66)
..+.|++.+| +.. .+|++ +.+..++..++|=.| +||.+.+.
T Consensus 34 ~~G~Vi~~lg-----n~~--y~V~~--~dG~~~l~~i~GK~Rk~I~i~~GD~V~ve 80 (117)
T 2oqk_A 34 EYGQVQRMLG-----NGR--LDAYC--FDGQKRLCHIRGKMRKKVWVNPGDIVLVS 80 (117)
T ss_dssp EEEEEEEEEE-----TTE--EEEEE--TTSCEEEEECCHHHHHHSCCCTTCEEEEE
T ss_pred EEEEEEEEcC-----CCE--EEEEe--CCCCEEEEEEcCceecCCcCCCCCEEEEE
Confidence 4688999888 223 34443 237788888888877 69988774
No 184
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=27.82 E-value=24 Score=21.34 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=12.2
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.++|..
T Consensus 35 S~~kGd~vevle~~ 48 (82)
T 1u3o_A 35 SIQVGQTVELLERP 48 (82)
T ss_dssp CBCTTCEEEESSCT
T ss_pred eEcCCCEEEEEecC
Confidence 48999999999965
No 185
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=27.69 E-value=21 Score=19.70 Aligned_cols=13 Identities=62% Similarity=0.912 Sum_probs=10.7
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 9 s~~~Gd~i~v~~~ 21 (77)
T 2jmc_A 9 TMKKGDILTLLNS 21 (77)
T ss_dssp CCCTTCEEECCCC
T ss_pred CCCCCCEEEEEEe
Confidence 3678999999875
No 186
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=27.68 E-value=99 Score=18.28 Aligned_cols=41 Identities=10% Similarity=0.276 Sum_probs=27.0
Q ss_pred eeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCcc-------ccCcEEEee
Q 037546 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGPV-------RVGDILTLL 56 (66)
Q Consensus 7 ~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGPV-------r~GDil~Ll 56 (66)
..+.|+|.++ +..- +|++ +.+..+...++|=. .+||.+.+.
T Consensus 16 ~~G~Vik~l~-----n~~f--~V~l--~nG~~~~c~i~GK~Rk~~I~Il~GD~V~ve 63 (79)
T 3i4o_A 16 VEGRVVEPLP-----NAMF--RIEL--ENGHKVLAHISGKMRQHYIRILPEDRVVVE 63 (79)
T ss_dssp EEEEEEEEET-----TTEE--EEEE--TTSCEEEEEECHHHHHTTCCCCTTCEEEEE
T ss_pred EEEEEEEEcC-----CCEE--EEEe--CCCCEEEEEeCcceecCCccCCCCCEEEEE
Confidence 4688888885 2333 4443 24677888888764 469998764
No 187
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=27.29 E-value=19 Score=19.62 Aligned_cols=12 Identities=8% Similarity=0.315 Sum_probs=10.1
Q ss_pred ccccCcEEEeeh
Q 037546 46 PVRVGDILTLLE 57 (66)
Q Consensus 46 PVr~GDil~LlE 57 (66)
++++||+|.+++
T Consensus 28 sf~~Gd~i~v~~ 39 (72)
T 1ugv_A 28 SFTAGTVFDNVH 39 (72)
T ss_dssp CBCTTCEEBSCC
T ss_pred CCcCCCEEEEEE
Confidence 478999999876
No 188
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=26.97 E-value=25 Score=18.91 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=11.6
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++.+
T Consensus 29 s~~~Gd~i~v~~~~ 42 (74)
T 2m0y_A 29 SLQIGDTVHILETY 42 (74)
T ss_dssp CEETTEEEEEEEBS
T ss_pred cCCCCCEEEEEEcC
Confidence 57889999998864
No 189
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=26.72 E-value=29 Score=18.41 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=10.5
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
..++||+|.+++.
T Consensus 26 sf~~Gd~i~v~~~ 38 (67)
T 3rnj_A 26 SFKEGDLITLLVP 38 (67)
T ss_dssp CBCTTCEEEECSS
T ss_pred cCCCCCEEEEeec
Confidence 5789999999853
No 190
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=26.57 E-value=27 Score=20.10 Aligned_cols=14 Identities=7% Similarity=0.489 Sum_probs=11.3
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 52 s~~~Gd~i~v~~~~ 65 (98)
T 1udl_A 52 SFSKGQLINVMNKD 65 (98)
T ss_dssp CCCTTCEEEECBCC
T ss_pred CCcCCCEEEEEEec
Confidence 36899999998853
No 191
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=26.56 E-value=16 Score=20.91 Aligned_cols=14 Identities=43% Similarity=0.650 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 35 sf~~Gd~i~v~~~~ 48 (93)
T 1wxu_A 35 SFRAGDMLNLALKE 48 (93)
T ss_dssp CBCSSCBCEECCTT
T ss_pred CcCCCCEEEEEECC
Confidence 47899999999865
No 192
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=26.47 E-value=29 Score=20.06 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=9.8
Q ss_pred ccccCcEEEee
Q 037546 46 PVRVGDILTLL 56 (66)
Q Consensus 46 PVr~GDil~Ll 56 (66)
++++||+|.++
T Consensus 41 sf~~Gd~i~v~ 51 (96)
T 1wie_A 41 PLTAGKYLYVY 51 (96)
T ss_dssp CCCTTCEEEEE
T ss_pred eECCCCEEEEe
Confidence 47899999999
No 193
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=26.29 E-value=34 Score=20.74 Aligned_cols=15 Identities=27% Similarity=0.423 Sum_probs=11.7
Q ss_pred eecCccccCcEEEee
Q 037546 42 NVKGPVRVGDILTLL 56 (66)
Q Consensus 42 nVkGPVr~GDil~Ll 56 (66)
+...||..||.|.+.
T Consensus 102 rF~~PV~~Gd~l~~~ 116 (161)
T 1q6w_A 102 RFLRPVFIGDTIAAS 116 (161)
T ss_dssp EECSCCBTTCEEEEE
T ss_pred EEecCCCCCCEEEEE
Confidence 446899999998764
No 194
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.00 E-value=26 Score=19.88 Aligned_cols=14 Identities=14% Similarity=0.218 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 35 s~~~Gd~i~v~~~~ 48 (88)
T 2cub_A 35 SLIKGTKVIVMEKC 48 (88)
T ss_dssp CCCTTEEEEEEEEC
T ss_pred CCCCCCEEEEEEcc
Confidence 37899999999864
No 195
>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}
Probab=25.96 E-value=31 Score=21.20 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=11.8
Q ss_pred eecCccccCcEEEee
Q 037546 42 NVKGPVRVGDILTLL 56 (66)
Q Consensus 42 nVkGPVr~GDil~Ll 56 (66)
....||+.||.|.+.
T Consensus 87 rF~~PV~~GD~L~~~ 101 (154)
T 3exz_A 87 SWPNPTRPGDELHVE 101 (154)
T ss_dssp ECSSCCCTTCEEEEE
T ss_pred EEcCCCCCCCEEEEE
Confidence 456899999998654
No 196
>3bbn_Q Ribosomal protein S17; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=25.84 E-value=23 Score=23.69 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=13.8
Q ss_pred eecCccccCcEEEeehh
Q 037546 42 NVKGPVRVGDILTLLES 58 (66)
Q Consensus 42 nVkGPVr~GDil~LlEs 58 (66)
+-.--+++||++.+.||
T Consensus 103 De~n~~kvGD~V~I~E~ 119 (142)
T 3bbn_Q 103 DPDNQFKVGDVVRLEKS 119 (142)
T ss_dssp CTTCCCCTTEEEEEEEC
T ss_pred CCCCCCCCCCEEEEEEc
Confidence 33456899999999998
No 197
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=25.57 E-value=30 Score=19.16 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=10.9
Q ss_pred cccCcEEEeehhH
Q 037546 47 VRVGDILTLLESE 59 (66)
Q Consensus 47 Vr~GDil~LlEsE 59 (66)
++.||+|.+++..
T Consensus 44 ~~~Gd~i~v~~~~ 56 (86)
T 2oi3_A 44 FQKGDQMVVLEES 56 (86)
T ss_dssp CCTTCEEEEEEES
T ss_pred CCCCCEEEEEEcC
Confidence 6889999998754
No 198
>2zkq_q 40S ribosomal protein S11E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 3jyv_Q* 1s1h_Q
Probab=25.48 E-value=26 Score=23.75 Aligned_cols=13 Identities=46% Similarity=0.718 Sum_probs=11.0
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
.+++||++.+.||
T Consensus 119 ~~kvGD~V~I~E~ 131 (158)
T 2zkq_q 119 DVQIGDIVTVGEC 131 (158)
T ss_dssp CC-CCCEEEEECC
T ss_pred cCCCCCEEEEEEc
Confidence 5999999999998
No 199
>2xzm_Q Ribosomal protein S17 containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_Q
Probab=25.36 E-value=26 Score=23.75 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.7
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
-+++||++.+.||
T Consensus 115 ~~kvGD~V~I~Ec 127 (157)
T 2xzm_Q 115 SVKEGDILVAGQC 127 (157)
T ss_dssp CCCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEc
Confidence 3899999999997
No 200
>2qfa_C Inner centromere protein; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens}
Probab=24.83 E-value=5.2 Score=22.67 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=13.0
Q ss_pred CcEEEeehhHHHHhhc
Q 037546 50 GDILTLLESEREARRL 65 (66)
Q Consensus 50 GDil~LlEsErEarrl 65 (66)
=|.++|.|-|.||.|.
T Consensus 29 k~mvWL~EIeeEA~RM 44 (47)
T 2qfa_C 29 KDLVWLEEIQEEAERM 44 (47)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHH
Confidence 3678899999999874
No 201
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=24.77 E-value=31 Score=19.95 Aligned_cols=14 Identities=7% Similarity=0.423 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 45 s~~~Gd~i~v~~~~ 58 (109)
T 2yt6_A 45 SFKKGERFQIINNT 58 (109)
T ss_dssp CCCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEcc
Confidence 47899999998753
No 202
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=24.71 E-value=29 Score=20.29 Aligned_cols=14 Identities=29% Similarity=0.631 Sum_probs=11.7
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 36 sf~~Gd~i~V~~~~ 49 (92)
T 2o2o_A 36 ELKVGDIIEVVGEV 49 (92)
T ss_dssp CBCSSCEEECCCGG
T ss_pred cccCCCEEEEeEec
Confidence 57899999999863
No 203
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.64 E-value=32 Score=19.82 Aligned_cols=13 Identities=23% Similarity=0.626 Sum_probs=10.6
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+++.||+|.+++.
T Consensus 43 sf~~Gd~i~vl~~ 55 (97)
T 2csq_A 43 PFKEGQIIKVYGD 55 (97)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 3789999999953
No 204
>3u5c_L RP41, S18, YS12, 40S ribosomal protein S11-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_P 3o30_F 3o2z_F 3u5g_L 3jyv_Q* 1s1h_Q
Probab=24.63 E-value=26 Score=23.71 Aligned_cols=13 Identities=46% Similarity=0.672 Sum_probs=11.6
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
-+++||++.+.||
T Consensus 116 ~~kvGD~V~I~Ec 128 (156)
T 3u5c_L 116 RVQVGDIVTVGQC 128 (156)
T ss_dssp CCCTTCEEEEEEE
T ss_pred cCCCCCEEEEEec
Confidence 3899999999997
No 205
>1y96_B Gemin7, SIP3, GEM-associated protein 7; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=24.53 E-value=1.1e+02 Score=18.80 Aligned_cols=31 Identities=23% Similarity=0.434 Sum_probs=23.5
Q ss_pred EEEEEEEec---CCCcEEEeeecCc--------cccCcEEEe
Q 037546 25 TQVRVQFMD---DTKRQITRNVKGP--------VRVGDILTL 55 (66)
Q Consensus 25 tqVrve~l~---d~~r~i~RnVkGP--------Vr~GDil~L 55 (66)
|+|..+|-. |-...+++|.+=| +|-.||+.+
T Consensus 40 t~V~a~F~a~d~d~~~f~Vs~L~TPiGv~~eAlLR~~Dii~~ 81 (85)
T 1y96_B 40 VRVAAHFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISY 81 (85)
T ss_dssp CEEEEEEEEECTTCCEEEEEEECCTTCCEEEEEEEGGGEEEE
T ss_pred eEEEEEEEecCcccceeEhhhcCCCcccchhhhhhcCCEEEE
Confidence 566777764 6668899999999 477888765
No 206
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.10 E-value=13 Score=20.15 Aligned_cols=13 Identities=15% Similarity=0.330 Sum_probs=10.7
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
++++||+|.+++.
T Consensus 26 sf~~Gd~i~v~~~ 38 (71)
T 2gqi_A 26 SFLKGDMFIVHNE 38 (71)
T ss_dssp CCCTTCBCCCCEE
T ss_pred CCCCCCEEEEEEe
Confidence 4789999999874
No 207
>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni}
Probab=24.01 E-value=37 Score=19.56 Aligned_cols=14 Identities=43% Similarity=0.698 Sum_probs=10.9
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
+-..|++.||.|.+
T Consensus 58 ~f~~pv~~gd~l~v 71 (137)
T 3d6l_A 58 VFKEPVFIGDIISC 71 (137)
T ss_dssp ECCSCCCTTCEEEE
T ss_pred EEeCCccCCCEEEE
Confidence 44689999998875
No 208
>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5
Probab=23.99 E-value=42 Score=19.43 Aligned_cols=14 Identities=43% Similarity=0.679 Sum_probs=10.6
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
+-..|++.||.|..
T Consensus 76 ~f~~pv~~Gd~l~~ 89 (131)
T 1ixl_A 76 RFTKPVKVGDKLVA 89 (131)
T ss_dssp EECSCCBTTCEEEE
T ss_pred EECCCCCCCCEEEE
Confidence 45679999997654
No 209
>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A
Probab=23.51 E-value=39 Score=21.57 Aligned_cols=13 Identities=38% Similarity=0.922 Sum_probs=11.1
Q ss_pred ecCccccCcEEEe
Q 037546 43 VKGPVRVGDILTL 55 (66)
Q Consensus 43 VkGPVr~GDil~L 55 (66)
...||..||.|..
T Consensus 112 F~~PV~~GDtl~~ 124 (159)
T 3k67_A 112 YTSPVRIGDVVRV 124 (159)
T ss_dssp ECSCCCTTCEEEE
T ss_pred EcCCcCCCCEEEE
Confidence 5689999999875
No 210
>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural GENO structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens}
Probab=23.47 E-value=39 Score=20.67 Aligned_cols=15 Identities=13% Similarity=0.472 Sum_probs=12.2
Q ss_pred eecCccccCcEEEee
Q 037546 42 NVKGPVRVGDILTLL 56 (66)
Q Consensus 42 nVkGPVr~GDil~Ll 56 (66)
....||..||.|.+.
T Consensus 93 rf~~PV~~Gd~l~~~ 107 (148)
T 3ir3_A 93 SFPAPLYIGEVVLAS 107 (148)
T ss_dssp ECCSCCBTTCEEEEE
T ss_pred EECCCcCCCCEEEEE
Confidence 357899999999873
No 211
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=23.26 E-value=74 Score=19.34 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=21.3
Q ss_pred eeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeee-----cCccccCcEEEe
Q 037546 7 KKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNV-----KGPVRVGDILTL 55 (66)
Q Consensus 7 ~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnV-----kGPVr~GDil~L 55 (66)
-|++|++|.+-. ..|++..-....-+-=+ .+++.+||.+.+
T Consensus 5 IP~kVvei~~~~--------A~Vd~~Gv~r~V~l~Lv~~~~~~~~~~vGD~VLV 50 (90)
T 2ot2_A 5 VPGQIRTIDGNQ--------AKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLV 50 (90)
T ss_dssp EEEEEEEECSSE--------EEEECSSSEEEEECTTTCSBCTTSCBCTTCEEEE
T ss_pred cceEEEEEcCCc--------EEEEcCCeEEEEEEeeeeccCCCCCCCCCCEEEE
Confidence 578999996521 34454322111111111 156888998753
No 212
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.09 E-value=1.4e+02 Score=18.59 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=29.4
Q ss_pred CeeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCc------cccCcEEEeeh
Q 037546 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP------VRVGDILTLLE 57 (66)
Q Consensus 6 ~~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGP------Vr~GDil~LlE 57 (66)
...|+|++.+|- ..++|++. .+..++-.+.|- |+.||++.+.-
T Consensus 16 e~~g~V~~~lgn-------~~f~V~l~--nG~~~la~i~GK~Rk~IwI~~GD~VlVe~ 64 (111)
T 2dgy_A 16 QQIVRVLRTPGN-------NLHEVETA--QGQRFLVSMPSKYRKNIWIKRGDFLIVDP 64 (111)
T ss_dssp CEEEEEEECCSS-------SEEEEECT--TSCEEEEECCTTCCSCCCCCSSCEEEEEE
T ss_pred eEEEEEEEeCCC-------CEEEEEeC--CCCEEEEEechhhcccEEEcCCCEEEEEe
Confidence 468999999982 24566653 466676677776 45788887643
No 213
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=23.09 E-value=21 Score=22.47 Aligned_cols=13 Identities=15% Similarity=0.026 Sum_probs=5.6
Q ss_pred CccccCcEEEeeh
Q 037546 45 GPVRVGDILTLLE 57 (66)
Q Consensus 45 GPVr~GDil~LlE 57 (66)
+|+++||.+.|..
T Consensus 2 ~~~~~Gd~v~~~~ 14 (258)
T 2pwy_A 2 SHMAWPGPLLLKD 14 (258)
T ss_dssp ------CCEEEEC
T ss_pred CCCCCCCEEEEEE
Confidence 6899999888874
No 214
>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4
Probab=22.76 E-value=38 Score=24.07 Aligned_cols=14 Identities=36% Similarity=0.506 Sum_probs=10.2
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
+...||+.||.|+.
T Consensus 278 r~~~PV~~GDtl~~ 291 (337)
T 2bi0_A 278 DHTAPVHEGDTLYS 291 (337)
T ss_dssp EECSCCCTTCEEEE
T ss_pred EecCCcCCCCEEEE
Confidence 45678888888765
No 215
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=21.40 E-value=42 Score=20.40 Aligned_cols=12 Identities=17% Similarity=0.650 Sum_probs=10.5
Q ss_pred ccccCcEEEeeh
Q 037546 46 PVRVGDILTLLE 57 (66)
Q Consensus 46 PVr~GDil~LlE 57 (66)
++++||+|.+++
T Consensus 62 sf~~GDiI~Vl~ 73 (115)
T 1bb9_A 62 QLKAGDVVLVIP 73 (115)
T ss_dssp CBCTTCEEEEEC
T ss_pred CcCCCCEEEEee
Confidence 368999999998
No 216
>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=21.15 E-value=1.5e+02 Score=18.28 Aligned_cols=42 Identities=21% Similarity=0.423 Sum_probs=28.8
Q ss_pred CeeEEEEEeccccCCcCcEEEEEEEEecCCCcEEEeeecCc------cccCcEEEee
Q 037546 6 PKKATVIKVIGRTGSRGQVTQVRVQFMDDTKRQITRNVKGP------VRVGDILTLL 56 (66)
Q Consensus 6 ~~~A~V~kVlGRtGs~G~~tqVrve~l~d~~r~i~RnVkGP------Vr~GDil~Ll 56 (66)
...|+|++.+| -..++|++. .+..++-.+.|= ++.||++.+.
T Consensus 21 e~~g~V~~~lg-------n~~~~V~l~--nG~~~la~i~GKmRk~IwI~~GD~VlVe 68 (102)
T 1jt8_A 21 EILGIIEQMLG-------ASRVRVRCL--DGKTRLGRIPGRLKNRIWVREGDVVIVK 68 (102)
T ss_dssp CEEEEEECSSC-------SSEEEEEEE--TTEEEEEECCHHHHHHHCCCSCEEEEEC
T ss_pred EEEEEEEEEcC-------CCEEEEEEC--CCCEEEEEEcccceeeEEecCCCEEEEE
Confidence 45799999998 234555553 466777667666 5589988764
No 217
>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural GENO structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A*
Probab=21.12 E-value=49 Score=19.39 Aligned_cols=14 Identities=36% Similarity=0.686 Sum_probs=10.8
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
+-+.|++.||.|.+
T Consensus 67 ~f~~pv~~gd~l~v 80 (153)
T 3bjk_A 67 NFIKPISVGDVVCC 80 (153)
T ss_dssp EECSCCCTTCEEEE
T ss_pred EEeCCccCCCEEEE
Confidence 44679999998865
No 218
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=21.10 E-value=41 Score=20.44 Aligned_cols=14 Identities=21% Similarity=0.622 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
++++||+|.+++..
T Consensus 77 sf~~Gd~i~vl~~~ 90 (119)
T 2rqr_A 77 SLQIGDVVRIQETC 90 (119)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred cCcCCCEEEEEEcC
Confidence 37899999999853
No 219
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=20.89 E-value=43 Score=18.87 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=11.5
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
+++.||+|.+++..
T Consensus 24 sf~~Gd~i~vl~~~ 37 (84)
T 4ag1_C 24 SFHKGEKFQILEFG 37 (84)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cccCCCEEEEEEec
Confidence 57899999998753
No 220
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=20.80 E-value=42 Score=20.32 Aligned_cols=13 Identities=8% Similarity=0.422 Sum_probs=11.1
Q ss_pred ccccCcEEEeehh
Q 037546 46 PVRVGDILTLLES 58 (66)
Q Consensus 46 PVr~GDil~LlEs 58 (66)
+.+.||+|.+++.
T Consensus 40 sf~~GDiI~Vl~k 52 (108)
T 1i1j_A 40 TIHRGQVVYVFSK 52 (108)
T ss_dssp CBCTTCEEEEEEE
T ss_pred ccCCCCEEEEEEe
Confidence 4789999999875
No 221
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=20.77 E-value=81 Score=19.03 Aligned_cols=22 Identities=36% Similarity=0.314 Sum_probs=15.1
Q ss_pred EEEeeecCccccCcEEEeehhH
Q 037546 38 QITRNVKGPVRVGDILTLLESE 59 (66)
Q Consensus 38 ~i~RnVkGPVr~GDil~LlEsE 59 (66)
.-+|.--=...+||+|.|.|.+
T Consensus 29 ~EiR~nDr~~~vGD~l~l~E~~ 50 (83)
T 3iuw_A 29 FEIRKNDRNFQVGDILILEEYM 50 (83)
T ss_dssp EEEEECCSCCCTTCEEEEEEEE
T ss_pred EEEEecccCCCCCCEEEEEEcc
Confidence 3333333348999999999985
No 222
>2jv2_A Putative uncharacterized protein PH1500; AAA ATPase NC-domain-like, unknown function; NMR {Pyrococcus horikoshii}
Probab=20.67 E-value=36 Score=20.25 Aligned_cols=11 Identities=36% Similarity=0.788 Sum_probs=9.4
Q ss_pred CccccCcEEEe
Q 037546 45 GPVRVGDILTL 55 (66)
Q Consensus 45 GPVr~GDil~L 55 (66)
=||.+||++.+
T Consensus 40 rPV~~GD~I~i 50 (83)
T 2jv2_A 40 KTVRTGDVIGI 50 (83)
T ss_dssp SEECTTCEEEE
T ss_pred CCccCCCEEEE
Confidence 38999999986
No 223
>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A
Probab=20.61 E-value=49 Score=20.81 Aligned_cols=15 Identities=33% Similarity=0.744 Sum_probs=12.0
Q ss_pred eecCccccCcEEEee
Q 037546 42 NVKGPVRVGDILTLL 56 (66)
Q Consensus 42 nVkGPVr~GDil~Ll 56 (66)
....||..||.|.+.
T Consensus 111 rF~~PV~~GD~L~~~ 125 (159)
T 2b3n_A 111 RYTSPVRIGDVVRVE 125 (159)
T ss_dssp EECSCCCTTCEEEEE
T ss_pred EECCCcCCCCEEEEE
Confidence 346899999998764
No 224
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=20.40 E-value=17 Score=20.01 Aligned_cols=14 Identities=29% Similarity=0.432 Sum_probs=11.4
Q ss_pred ccccCcEEEeehhH
Q 037546 46 PVRVGDILTLLESE 59 (66)
Q Consensus 46 PVr~GDil~LlEsE 59 (66)
.++.||+|.+++..
T Consensus 38 s~~~Gd~i~v~~~~ 51 (77)
T 1awj_A 38 ALRCDEEYYLLDSS 51 (77)
T ss_dssp CBCSSSCCSCCCTT
T ss_pred CCCCCCEEEEEEec
Confidence 37899999998764
No 225
>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication, ACOT7, macrophage; HET: COA; 1.78A {Mus musculus}
Probab=20.30 E-value=50 Score=19.50 Aligned_cols=14 Identities=14% Similarity=0.558 Sum_probs=11.0
Q ss_pred eecCccccCcEEEe
Q 037546 42 NVKGPVRVGDILTL 55 (66)
Q Consensus 42 nVkGPVr~GDil~L 55 (66)
+-+.|++.||.|.+
T Consensus 57 ~f~~Pv~~gd~l~i 70 (151)
T 2v1o_A 57 DFLSPMCIGEVAHV 70 (151)
T ss_dssp ECCSCCBTTCEEEE
T ss_pred EEeCCCCCCCEEEE
Confidence 44679999998865
Done!