Query 037554
Match_columns 173
No_of_seqs 144 out of 1163
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 23:20:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037554.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037554hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eoo_A Methylisocitrate lyase; 100.0 8.4E-45 2.9E-49 308.3 19.2 165 1-165 92-295 (298)
2 3fa4_A 2,3-dimethylmalate lyas 100.0 1E-43 3.5E-48 302.0 16.5 162 1-164 89-292 (302)
3 3ih1_A Methylisocitrate lyase; 100.0 9.4E-43 3.2E-47 296.6 19.3 164 1-166 98-300 (305)
4 3lye_A Oxaloacetate acetyl hyd 100.0 4.1E-43 1.4E-47 299.0 16.4 162 1-164 97-300 (307)
5 1xg4_A Probable methylisocitra 100.0 2.9E-41 1E-45 286.3 19.4 168 1-169 87-294 (295)
6 1zlp_A PSR132, petal death pro 100.0 2.7E-41 9.3E-46 288.9 18.8 163 1-163 110-311 (318)
7 3b8i_A PA4872 oxaloacetate dec 100.0 6.9E-41 2.4E-45 283.1 15.5 160 1-166 91-286 (287)
8 2hjp_A Phosphonopyruvate hydro 100.0 2.8E-40 9.7E-45 279.7 17.2 164 1-164 84-290 (290)
9 1s2w_A Phosphoenolpyruvate pho 100.0 1.5E-39 5.1E-44 275.9 15.9 164 1-164 88-293 (295)
10 1f8m_A Isocitrate lyase, ICL; 100.0 4.1E-33 1.4E-37 245.7 14.0 135 1-135 157-374 (429)
11 3eol_A Isocitrate lyase; seatt 100.0 2.2E-33 7.6E-38 247.3 11.8 135 1-135 154-373 (433)
12 3i4e_A Isocitrate lyase; struc 100.0 2.3E-32 7.9E-37 241.0 14.2 134 1-134 161-377 (439)
13 3lg3_A Isocitrate lyase; conse 100.0 7E-32 2.4E-36 237.6 13.8 133 1-133 161-377 (435)
14 2ze3_A DFA0005; organic waste 100.0 3.4E-31 1.2E-35 222.6 12.0 144 1-151 85-274 (275)
15 2qiw_A PEP phosphonomutase; st 99.9 1.1E-25 3.9E-30 187.2 11.1 119 1-131 89-254 (255)
16 1dqu_A Isocitrate lyase; beta 99.9 9.9E-27 3.4E-31 209.4 2.0 129 1-130 171-353 (538)
17 3vav_A 3-methyl-2-oxobutanoate 99.1 6E-11 2.1E-15 99.4 4.6 76 2-87 101-203 (275)
18 1m3u_A 3-methyl-2-oxobutanoate 98.7 4.6E-09 1.6E-13 87.5 4.1 67 3-87 90-191 (264)
19 1o66_A 3-methyl-2-oxobutanoate 98.7 1.1E-08 3.8E-13 85.6 6.0 68 2-87 89-191 (275)
20 1oy0_A Ketopantoate hydroxymet 98.5 8.7E-08 3E-12 80.4 5.9 68 2-87 106-209 (281)
21 2r91_A 2-keto-3-deoxy-(6-phosp 93.4 0.27 9.1E-06 40.4 7.7 73 5-87 17-113 (286)
22 2ehh_A DHDPS, dihydrodipicolin 92.6 0.59 2E-05 38.5 8.8 75 5-87 19-117 (294)
23 2nuw_A 2-keto-3-deoxygluconate 92.5 0.31 1.1E-05 40.1 7.0 87 5-101 18-147 (288)
24 2yxg_A DHDPS, dihydrodipicolin 92.4 0.69 2.4E-05 38.0 9.0 75 5-87 19-117 (289)
25 2ojp_A DHDPS, dihydrodipicolin 92.4 0.68 2.3E-05 38.1 8.9 75 5-87 20-118 (292)
26 1w3i_A EDA, 2-keto-3-deoxy glu 92.4 0.38 1.3E-05 39.7 7.4 73 5-87 18-114 (293)
27 3m5v_A DHDPS, dihydrodipicolin 92.2 0.76 2.6E-05 38.0 9.0 75 5-87 26-125 (301)
28 3flu_A DHDPS, dihydrodipicolin 92.2 0.72 2.5E-05 38.1 8.8 75 5-87 26-124 (297)
29 3l21_A DHDPS, dihydrodipicolin 92.0 0.83 2.8E-05 37.9 9.0 75 5-87 34-132 (304)
30 1xky_A Dihydrodipicolinate syn 91.9 0.78 2.7E-05 38.0 8.8 75 5-87 31-129 (301)
31 2v9d_A YAGE; dihydrodipicolini 91.8 0.66 2.3E-05 39.3 8.3 75 5-87 50-148 (343)
32 3cpr_A Dihydrodipicolinate syn 91.7 0.66 2.3E-05 38.4 8.1 75 5-87 35-133 (304)
33 3daq_A DHDPS, dihydrodipicolin 91.6 0.63 2.2E-05 38.3 7.8 74 6-87 22-119 (292)
34 2r8w_A AGR_C_1641P; APC7498, d 91.5 0.66 2.2E-05 39.1 7.9 75 5-87 53-151 (332)
35 3a5f_A Dihydrodipicolinate syn 91.4 0.69 2.4E-05 38.0 7.8 75 5-87 20-118 (291)
36 4a29_A Engineered retro-aldol 90.9 0.36 1.2E-05 39.7 5.5 23 94-116 218-240 (258)
37 3vav_A 3-methyl-2-oxobutanoate 90.8 0.32 1.1E-05 40.4 5.2 118 11-134 40-189 (275)
38 3qfe_A Putative dihydrodipicol 90.8 0.76 2.6E-05 38.4 7.6 75 5-87 30-130 (318)
39 1o5k_A DHDPS, dihydrodipicolin 90.8 0.83 2.8E-05 37.9 7.8 75 5-87 31-129 (306)
40 1dqu_A Isocitrate lyase; beta 90.6 0.46 1.6E-05 42.9 6.4 69 68-136 387-484 (538)
41 3b4u_A Dihydrodipicolinate syn 90.6 0.68 2.3E-05 38.2 7.0 75 5-87 22-121 (294)
42 3tsm_A IGPS, indole-3-glycerol 90.5 0.29 9.8E-06 40.4 4.7 94 7-110 79-197 (272)
43 3na8_A Putative dihydrodipicol 90.5 0.77 2.6E-05 38.3 7.4 75 5-87 43-141 (315)
44 3si9_A DHDPS, dihydrodipicolin 90.4 1 3.5E-05 37.6 8.1 75 5-87 41-139 (315)
45 2vc6_A MOSA, dihydrodipicolina 90.3 0.73 2.5E-05 37.9 7.0 75 5-87 19-117 (292)
46 4dpp_A DHDPS 2, dihydrodipicol 90.2 1.5 5.2E-05 37.5 9.1 75 5-87 78-176 (360)
47 1f6k_A N-acetylneuraminate lya 89.5 0.85 2.9E-05 37.5 6.8 75 5-87 22-121 (293)
48 2wkj_A N-acetylneuraminate lya 89.4 1.9 6.6E-05 35.6 8.9 75 5-87 30-128 (303)
49 3s5o_A 4-hydroxy-2-oxoglutarat 89.4 0.67 2.3E-05 38.5 6.1 75 5-87 33-133 (307)
50 3eb2_A Putative dihydrodipicol 89.3 0.72 2.5E-05 38.1 6.2 75 5-87 23-121 (300)
51 3fkr_A L-2-keto-3-deoxyarabona 89.2 0.79 2.7E-05 38.1 6.4 75 5-87 27-128 (309)
52 2rfg_A Dihydrodipicolinate syn 89.2 0.7 2.4E-05 38.2 6.0 75 5-87 19-117 (297)
53 3h5d_A DHDPS, dihydrodipicolin 89.0 1.7 5.8E-05 36.1 8.4 75 5-87 26-125 (311)
54 3dz1_A Dihydrodipicolinate syn 89.0 1 3.5E-05 37.4 7.0 75 5-87 27-123 (313)
55 3tak_A DHDPS, dihydrodipicolin 88.5 2.1 7.3E-05 35.0 8.6 75 5-87 20-118 (291)
56 4e38_A Keto-hydroxyglutarate-a 88.5 3.7 0.00013 32.9 9.8 88 5-111 44-156 (232)
57 3qja_A IGPS, indole-3-glycerol 88.5 1.1 3.8E-05 36.7 6.7 94 7-110 72-190 (272)
58 3e96_A Dihydrodipicolinate syn 88.3 1.3 4.6E-05 36.8 7.2 75 5-87 31-128 (316)
59 3d0c_A Dihydrodipicolinate syn 88.3 1.5 5.3E-05 36.4 7.6 75 5-87 31-128 (314)
60 2cw6_A Hydroxymethylglutaryl-C 87.2 1.5 5.2E-05 36.0 6.9 45 5-60 154-198 (298)
61 3qze_A DHDPS, dihydrodipicolin 87.1 2.1 7.1E-05 35.6 7.7 75 5-87 42-140 (314)
62 3ble_A Citramalate synthase fr 87.1 1.7 5.7E-05 36.6 7.2 52 5-67 167-218 (337)
63 1m3u_A 3-methyl-2-oxobutanoate 86.9 1 3.5E-05 37.1 5.6 75 11-87 28-126 (264)
64 1o66_A 3-methyl-2-oxobutanoate 85.5 1.2 4E-05 37.0 5.2 75 11-87 28-127 (275)
65 3qz6_A HPCH/HPAI aldolase; str 84.6 2.4 8.1E-05 34.4 6.7 62 11-87 28-106 (261)
66 1ydo_A HMG-COA lyase; TIM-barr 84.4 1.6 5.5E-05 36.2 5.7 45 5-60 155-199 (307)
67 3lab_A Putative KDPG (2-keto-3 84.2 12 0.00042 29.7 10.6 88 5-111 23-141 (217)
68 1rd5_A Tryptophan synthase alp 84.2 2.6 9E-05 33.5 6.7 74 2-79 27-128 (262)
69 2hmc_A AGR_L_411P, dihydrodipi 84.1 2.2 7.6E-05 36.1 6.5 73 5-87 45-141 (344)
70 1h1y_A D-ribulose-5-phosphate 83.8 0.44 1.5E-05 37.5 1.9 96 5-108 17-144 (228)
71 3rmj_A 2-isopropylmalate synth 83.7 2.8 9.4E-05 35.8 7.0 46 5-61 155-200 (370)
72 3l0g_A Nicotinate-nucleotide p 83.4 2.3 7.9E-05 35.6 6.2 42 68-110 226-280 (300)
73 3qja_A IGPS, indole-3-glycerol 83.3 3.1 0.0001 34.0 6.8 104 12-132 127-263 (272)
74 3eeg_A 2-isopropylmalate synth 83.2 2.9 9.9E-05 35.0 6.8 46 5-61 149-194 (325)
75 3ewb_X 2-isopropylmalate synth 83.2 2.6 8.9E-05 34.7 6.4 46 5-61 148-193 (293)
76 1jub_A Dihydroorotate dehydrog 83.1 15 0.00051 29.7 11.0 67 5-77 104-193 (311)
77 1wa3_A 2-keto-3-deoxy-6-phosph 82.6 13 0.00046 27.9 10.5 22 5-26 20-41 (205)
78 2nx9_A Oxaloacetate decarboxyl 82.6 3.4 0.00011 36.5 7.2 51 5-67 156-206 (464)
79 2ftp_A Hydroxymethylglutaryl-C 82.4 2.4 8.1E-05 34.9 5.9 45 5-60 157-201 (302)
80 3o63_A Probable thiamine-phosp 81.7 5.7 0.0002 31.8 7.8 96 8-110 44-163 (243)
81 1ydn_A Hydroxymethylglutaryl-C 81.7 2.6 9E-05 34.3 5.9 52 5-67 153-204 (295)
82 3bg3_A Pyruvate carboxylase, m 81.2 4.1 0.00014 37.9 7.6 45 5-60 259-303 (718)
83 1rqb_A Transcarboxylase 5S sub 81.1 4.9 0.00017 36.2 7.9 46 5-61 173-218 (539)
84 2ekc_A AQ_1548, tryptophan syn 80.6 10 0.00034 30.4 9.0 25 2-26 26-50 (262)
85 3igs_A N-acetylmannosamine-6-p 80.4 3.2 0.00011 33.0 5.8 22 6-27 35-56 (232)
86 3vnd_A TSA, tryptophan synthas 79.8 11 0.00039 30.5 9.1 23 8-30 111-133 (267)
87 1zlp_A PSR132, petal death pro 79.6 6.2 0.00021 33.2 7.6 49 12-61 51-100 (318)
88 1xg4_A Probable methylisocitra 79.4 8.2 0.00028 32.0 8.2 65 12-78 29-116 (295)
89 1xi3_A Thiamine phosphate pyro 79.4 5.6 0.00019 30.0 6.8 91 8-109 27-135 (215)
90 1qop_A Tryptophan synthase alp 79.0 3.9 0.00013 32.9 6.0 25 2-26 26-50 (268)
91 1vc4_A Indole-3-glycerol phosp 78.1 2.2 7.5E-05 34.4 4.2 90 7-110 65-182 (254)
92 3f4w_A Putative hexulose 6 pho 77.7 20 0.00069 26.9 12.1 23 93-115 171-193 (211)
93 3ivs_A Homocitrate synthase, m 77.7 4.5 0.00015 35.3 6.3 44 5-59 178-221 (423)
94 1oy0_A Ketopantoate hydroxymet 77.6 1.5 5.2E-05 36.4 3.1 75 11-87 45-145 (281)
95 3tqv_A Nicotinate-nucleotide p 77.0 4.8 0.00016 33.4 6.0 44 68-112 217-273 (287)
96 4hb7_A Dihydropteroate synthas 76.0 7.9 0.00027 31.8 7.0 77 5-87 28-121 (270)
97 2v82_A 2-dehydro-3-deoxy-6-pho 75.7 9.4 0.00032 29.0 7.1 86 5-108 17-127 (212)
98 1xi3_A Thiamine phosphate pyro 75.2 23 0.0008 26.4 10.0 23 92-114 173-195 (215)
99 3vnd_A TSA, tryptophan synthas 74.8 6.1 0.00021 32.2 6.1 142 2-147 27-222 (267)
100 3q58_A N-acetylmannosamine-6-p 74.5 1.5 5.1E-05 34.9 2.3 21 6-26 35-55 (229)
101 2xz9_A Phosphoenolpyruvate-pro 74.2 33 0.0011 28.5 10.7 68 68-136 134-252 (324)
102 3lye_A Oxaloacetate acetyl hyd 74.0 7 0.00024 32.7 6.3 66 12-78 37-125 (307)
103 1nvm_A HOA, 4-hydroxy-2-oxoval 73.3 9.2 0.00032 31.9 7.0 45 5-60 147-191 (345)
104 1yad_A Regulatory protein TENI 73.1 15 0.00052 28.0 7.8 89 8-110 31-138 (221)
105 3b0p_A TRNA-dihydrouridine syn 72.2 17 0.00057 30.4 8.4 107 5-113 68-229 (350)
106 3tha_A Tryptophan synthase alp 71.3 2.3 8E-05 34.6 2.7 28 2-29 95-125 (252)
107 3o63_A Probable thiamine-phosp 71.3 37 0.0013 27.0 10.8 22 93-114 203-224 (243)
108 2e6f_A Dihydroorotate dehydrog 70.2 23 0.00079 28.6 8.6 67 5-77 104-196 (314)
109 1f76_A Dihydroorotate dehydrog 70.1 6.2 0.00021 32.5 5.2 24 7-30 225-248 (336)
110 2h6r_A Triosephosphate isomera 69.1 9.4 0.00032 29.8 5.8 90 13-115 75-205 (219)
111 2qf7_A Pyruvate carboxylase pr 68.4 13 0.00045 36.3 7.7 51 5-67 707-757 (1165)
112 3fa4_A 2,3-dimethylmalate lyas 67.6 4.1 0.00014 34.0 3.5 54 12-66 30-84 (302)
113 2hjp_A Phosphonopyruvate hydro 67.5 4.3 0.00015 33.6 3.6 64 12-78 27-112 (290)
114 1i4n_A Indole-3-glycerol phosp 67.2 4 0.00014 33.1 3.3 92 7-110 61-179 (251)
115 3gnn_A Nicotinate-nucleotide p 67.0 8.3 0.00029 32.1 5.3 43 68-111 228-283 (298)
116 1tqj_A Ribulose-phosphate 3-ep 66.2 4.3 0.00015 32.0 3.2 67 5-78 15-94 (230)
117 3nl6_A Thiamine biosynthetic b 66.1 29 0.00098 31.0 9.0 93 7-110 25-139 (540)
118 2y7e_A 3-keto-5-aminohexanoate 65.9 15 0.00051 30.3 6.6 54 5-67 32-85 (282)
119 1rpx_A Protein (ribulose-phosp 65.7 3.1 0.00011 32.2 2.3 27 5-31 21-49 (230)
120 1geq_A Tryptophan synthase alp 65.3 25 0.00086 27.2 7.6 21 10-30 98-118 (248)
121 3lot_A Uncharacterized protein 64.7 17 0.00059 30.3 6.8 60 6-74 31-93 (314)
122 3no5_A Uncharacterized protein 64.6 17 0.00057 29.8 6.6 53 6-67 29-81 (275)
123 3ctl_A D-allulose-6-phosphate 64.5 3.1 0.0001 33.2 2.1 26 5-31 11-38 (231)
124 3eoo_A Methylisocitrate lyase; 64.2 6.1 0.00021 32.9 3.9 64 12-77 34-119 (298)
125 3b8i_A PA4872 oxaloacetate dec 63.8 3.6 0.00012 34.0 2.5 66 12-79 33-120 (287)
126 4adt_A Pyridoxine biosynthetic 63.4 57 0.0019 26.8 9.7 20 95-114 224-243 (297)
127 3nav_A Tryptophan synthase alp 62.1 62 0.0021 26.2 10.2 23 8-30 113-135 (271)
128 2yw3_A 4-hydroxy-2-oxoglutarat 62.0 25 0.00085 27.1 6.9 85 5-110 23-132 (207)
129 2pcq_A Putative dihydrodipicol 61.8 6.1 0.00021 32.1 3.5 61 5-77 17-96 (283)
130 1yxy_A Putative N-acetylmannos 61.6 31 0.001 26.4 7.4 95 10-114 91-220 (234)
131 3zwt_A Dihydroorotate dehydrog 61.6 12 0.00041 31.8 5.3 90 6-114 233-332 (367)
132 2ztj_A Homocitrate synthase; ( 61.2 19 0.00065 30.6 6.6 43 5-59 143-185 (382)
133 1gte_A Dihydropyrimidine dehyd 61.2 98 0.0033 29.4 12.1 65 5-75 646-734 (1025)
134 3qqw_A Putative citrate lyase; 61.2 8.8 0.0003 32.1 4.4 66 11-87 33-129 (332)
135 3chv_A Prokaryotic domain of u 61.1 22 0.00074 29.3 6.7 53 6-67 33-85 (284)
136 2zad_A Muconate cycloisomerase 60.3 25 0.00086 28.9 7.1 50 2-67 136-185 (345)
137 3ih1_A Methylisocitrate lyase; 59.8 14 0.00049 30.7 5.4 64 12-78 41-126 (305)
138 3c6c_A 3-keto-5-aminohexanoate 59.7 21 0.00073 29.8 6.5 62 6-75 47-111 (316)
139 3paj_A Nicotinate-nucleotide p 59.7 10 0.00034 32.0 4.5 43 68-111 250-305 (320)
140 3q94_A Fructose-bisphosphate a 58.9 48 0.0016 27.3 8.4 115 7-126 118-253 (288)
141 2hwg_A Phosphoenolpyruvate-pro 58.9 1E+02 0.0035 27.7 11.4 84 46-136 367-501 (575)
142 2inf_A URO-D, UPD, uroporphyri 58.8 46 0.0016 27.4 8.5 32 9-50 195-226 (359)
143 3kdn_A Rubisco, ribulose bisph 58.5 61 0.0021 28.4 9.4 124 5-130 169-418 (444)
144 3r4i_A Citrate lyase; TIM beta 58.3 13 0.00046 31.1 5.1 94 11-115 32-181 (339)
145 3hbl_A Pyruvate carboxylase; T 58.1 23 0.00078 34.6 7.2 44 6-60 691-734 (1150)
146 1lt8_A Betaine-homocysteine me 57.8 48 0.0016 28.5 8.6 80 6-87 53-170 (406)
147 2wqd_A Phosphoenolpyruvate-pro 57.7 81 0.0028 28.4 10.4 85 45-136 368-503 (572)
148 1h5y_A HISF; histidine biosynt 57.5 23 0.00078 26.9 6.0 70 7-87 33-119 (253)
149 3f4w_A Putative hexulose 6 pho 57.4 4.5 0.00015 30.7 1.8 41 68-109 76-134 (211)
150 3qll_A Citrate lyase; beta bar 56.9 12 0.00041 31.1 4.5 109 14-133 60-223 (316)
151 1u5h_A CITE; TIM barrel, struc 56.8 24 0.00082 28.4 6.2 57 18-87 27-102 (273)
152 4ay7_A Methylcobalamin\: coenz 56.6 32 0.0011 28.3 7.1 35 9-51 192-226 (348)
153 2tps_A Protein (thiamin phosph 56.6 29 0.00099 26.2 6.4 91 9-108 33-142 (227)
154 1thf_D HISF protein; thermophI 56.3 21 0.00071 27.7 5.6 69 8-87 31-116 (253)
155 1dxe_A 2-dehydro-3-deoxy-galac 56.1 22 0.00075 28.3 5.8 109 12-135 32-214 (256)
156 3tr9_A Dihydropteroate synthas 56.0 17 0.00059 30.4 5.3 72 3-81 45-138 (314)
157 1ka9_F Imidazole glycerol phos 55.8 28 0.00095 26.9 6.3 70 7-87 31-117 (252)
158 2nli_A Lactate oxidase; flavoe 55.8 85 0.0029 26.3 9.7 23 5-27 144-166 (368)
159 3i65_A Dihydroorotate dehydrog 55.6 58 0.002 28.2 8.8 36 94-129 359-397 (415)
160 1s2w_A Phosphoenolpyruvate pho 55.4 5.8 0.0002 32.9 2.3 64 12-78 31-116 (295)
161 3ovp_A Ribulose-phosphate 3-ep 55.3 60 0.002 25.3 8.2 35 93-127 181-220 (228)
162 3iwp_A Copper homeostasis prot 55.1 23 0.00077 29.4 5.8 90 11-111 50-188 (287)
163 3ru6_A Orotidine 5'-phosphate 54.6 91 0.0031 25.8 9.7 61 68-129 170-252 (303)
164 3nav_A Tryptophan synthase alp 53.8 6.2 0.00021 32.3 2.2 143 1-147 28-224 (271)
165 3inp_A D-ribulose-phosphate 3- 53.8 65 0.0022 25.7 8.3 23 93-115 207-229 (246)
166 2vws_A YFAU, 2-keto-3-deoxy su 53.7 28 0.00095 27.9 6.1 112 11-135 30-214 (267)
167 1r3s_A URO-D, uroporphyrinogen 53.6 51 0.0017 27.3 7.9 22 9-30 199-220 (367)
168 1eep_A Inosine 5'-monophosphat 52.3 44 0.0015 28.2 7.4 92 9-113 154-289 (404)
169 2fli_A Ribulose-phosphate 3-ep 52.1 4.3 0.00015 31.0 0.9 24 5-28 14-37 (220)
170 1tqx_A D-ribulose-5-phosphate 51.8 9.6 0.00033 30.2 3.0 93 5-106 16-142 (227)
171 1qpo_A Quinolinate acid phosph 51.7 32 0.0011 28.1 6.3 42 68-110 213-270 (284)
172 3zwt_A Dihydroorotate dehydrog 51.7 51 0.0017 27.8 7.6 11 68-78 246-256 (367)
173 1vhc_A Putative KHG/KDPG aldol 51.6 40 0.0014 26.4 6.6 85 5-108 27-136 (224)
174 1izc_A Macrophomate synthase i 51.0 54 0.0018 27.4 7.6 111 11-134 54-250 (339)
175 1wbh_A KHG/KDPG aldolase; lyas 51.0 39 0.0013 26.2 6.4 85 5-108 26-135 (214)
176 2e6f_A Dihydroorotate dehydrog 50.9 7.4 0.00025 31.6 2.2 26 5-30 172-198 (314)
177 2v5j_A 2,4-dihydroxyhept-2-ENE 50.8 31 0.0011 28.1 6.0 112 11-135 51-235 (287)
178 2ze3_A DFA0005; organic waste 50.8 13 0.00046 30.3 3.7 64 12-78 28-114 (275)
179 1p0k_A Isopentenyl-diphosphate 50.7 1E+02 0.0035 25.2 9.9 22 95-116 266-287 (349)
180 2qjg_A Putative aldolase MJ040 49.9 89 0.0031 24.3 11.4 48 68-115 178-243 (273)
181 1ypf_A GMP reductase; GUAC, pu 49.9 30 0.001 28.6 5.8 16 11-26 161-176 (336)
182 1pii_A N-(5'phosphoribosyl)ant 49.8 14 0.00047 32.5 3.9 92 7-110 68-185 (452)
183 3gr7_A NADPH dehydrogenase; fl 49.2 1.1E+02 0.0038 25.2 9.8 20 8-27 145-164 (340)
184 3nwr_A A rubisco-like protein; 49.1 1.1E+02 0.0038 26.6 9.5 125 5-131 175-409 (432)
185 3i65_A Dihydroorotate dehydrog 48.6 19 0.00066 31.2 4.6 24 7-30 283-306 (415)
186 1ujp_A Tryptophan synthase alp 48.4 33 0.0011 27.6 5.8 24 2-26 25-48 (271)
187 1qwg_A PSL synthase;, (2R)-pho 48.2 51 0.0018 26.7 6.8 41 8-59 86-126 (251)
188 1mxs_A KDPG aldolase; 2-keto-3 47.9 57 0.002 25.5 7.0 85 5-108 36-145 (225)
189 2qiw_A PEP phosphonomutase; st 47.8 18 0.00061 29.2 4.0 48 12-61 32-80 (255)
190 3inp_A D-ribulose-phosphate 3- 47.3 18 0.00062 29.0 4.0 27 5-31 38-66 (246)
191 1xm3_A Thiazole biosynthesis p 47.3 1E+02 0.0036 24.3 10.6 101 2-114 74-212 (264)
192 1ep3_A Dihydroorotate dehydrog 47.2 1E+02 0.0036 24.3 9.1 104 5-114 109-275 (311)
193 1z41_A YQJM, probable NADH-dep 47.0 1.2E+02 0.004 24.9 9.8 58 8-67 145-214 (338)
194 3tdn_A FLR symmetric alpha-bet 46.9 18 0.00061 28.2 3.8 24 7-30 35-58 (247)
195 3tsm_A IGPS, indole-3-glycerol 46.5 62 0.0021 26.3 7.1 100 12-128 134-266 (272)
196 1kbi_A Cytochrome B2, L-LCR; f 46.3 39 0.0013 29.9 6.3 80 11-115 355-438 (511)
197 4fxs_A Inosine-5'-monophosphat 46.2 28 0.00096 30.6 5.3 60 3-75 226-299 (496)
198 3sr7_A Isopentenyl-diphosphate 45.5 17 0.00059 30.8 3.7 17 11-27 221-237 (365)
199 4exq_A UPD, URO-D, uroporphyri 45.4 72 0.0025 26.6 7.6 22 9-30 199-220 (368)
200 2eja_A URO-D, UPD, uroporphyri 45.4 1.1E+02 0.0038 24.7 8.7 22 9-30 181-202 (338)
201 2rdx_A Mandelate racemase/muco 45.0 46 0.0016 27.6 6.3 50 4-67 144-194 (379)
202 1twd_A Copper homeostasis prot 44.9 17 0.00057 29.7 3.4 44 68-111 85-150 (256)
203 1mdl_A Mandelate racemase; iso 44.1 52 0.0018 27.0 6.5 53 2-67 141-194 (359)
204 1aj0_A DHPS, dihydropteroate s 43.9 34 0.0011 28.0 5.1 76 3-85 34-127 (282)
205 3ist_A Glutamate racemase; str 43.9 1.1E+02 0.0037 24.5 8.2 67 53-122 21-88 (269)
206 1j93_A UROD, uroporphyrinogen 43.6 99 0.0034 25.2 8.1 22 9-30 195-216 (353)
207 2y5s_A DHPS, dihydropteroate s 43.4 76 0.0026 26.0 7.3 70 5-81 44-130 (294)
208 3rmj_A 2-isopropylmalate synth 42.9 36 0.0012 28.8 5.3 80 5-87 85-191 (370)
209 2p8b_A Mandelate racemase/muco 42.8 68 0.0023 26.4 7.0 46 2-61 138-183 (369)
210 4fo4_A Inosine 5'-monophosphat 42.6 38 0.0013 28.7 5.5 55 8-75 108-176 (366)
211 3cu2_A Ribulose-5-phosphate 3- 42.4 8.7 0.0003 30.7 1.3 27 5-31 24-52 (237)
212 3ugs_B Undecaprenyl pyrophosph 42.1 15 0.00051 29.4 2.6 19 2-20 133-151 (225)
213 2f6u_A GGGPS, (S)-3-O-geranylg 41.8 20 0.00068 28.6 3.3 58 9-80 22-88 (234)
214 3fk4_A Rubisco-like protein; s 41.7 1.2E+02 0.004 26.3 8.5 128 5-133 154-390 (414)
215 4avf_A Inosine-5'-monophosphat 41.6 37 0.0013 29.7 5.4 24 4-27 225-248 (490)
216 2yzr_A Pyridoxal biosynthesis 41.5 18 0.00061 30.6 3.1 47 9-57 26-73 (330)
217 2vp8_A Dihydropteroate synthas 41.3 25 0.00086 29.4 4.0 71 5-83 63-152 (318)
218 3ppg_A 5-methyltetrahydroptero 41.1 1.5E+02 0.0052 27.8 9.6 116 8-129 617-787 (789)
219 2bdq_A Copper homeostasis prot 41.0 23 0.0008 28.2 3.6 43 68-110 88-154 (224)
220 1qap_A Quinolinic acid phospho 40.8 46 0.0016 27.4 5.5 43 68-111 227-282 (296)
221 2y88_A Phosphoribosyl isomeras 39.8 12 0.00039 29.0 1.6 68 8-87 32-116 (244)
222 2htm_A Thiazole biosynthesis p 38.6 55 0.0019 26.8 5.6 76 11-114 136-212 (268)
223 2ftp_A Hydroxymethylglutaryl-C 38.3 43 0.0015 27.2 5.0 46 11-60 87-133 (302)
224 3eez_A Putative mandelate race 37.9 1.1E+02 0.0036 25.6 7.5 95 3-112 143-270 (378)
225 3ldv_A Orotidine 5'-phosphate 37.8 68 0.0023 25.8 6.0 77 7-115 162-240 (255)
226 3hq1_A 2-isopropylmalate synth 37.7 56 0.0019 30.0 6.0 52 5-67 224-282 (644)
227 2ekc_A AQ_1548, tryptophan syn 37.7 1.5E+02 0.0051 23.3 10.1 20 10-29 112-131 (262)
228 2w6r_A Imidazole glycerol phos 37.7 57 0.0019 25.3 5.5 70 7-87 30-119 (266)
229 3cyv_A URO-D, UPD, uroporphyri 37.5 1.5E+02 0.0052 24.0 8.3 32 9-50 189-220 (354)
230 3e49_A Uncharacterized protein 36.6 62 0.0021 26.8 5.7 48 6-59 31-78 (311)
231 3usb_A Inosine-5'-monophosphat 36.5 52 0.0018 29.0 5.5 23 7-29 255-277 (511)
232 1tx2_A DHPS, dihydropteroate s 36.0 65 0.0022 26.5 5.7 63 5-74 61-140 (297)
233 2nv1_A Pyridoxal biosynthesis 35.6 22 0.00076 28.8 2.8 21 8-28 29-49 (305)
234 1l6s_A Porphobilinogen synthas 34.7 1.7E+02 0.0059 24.5 8.0 43 9-67 146-188 (323)
235 2qdd_A Mandelate racemase/muco 34.3 1.1E+02 0.0038 25.2 7.0 95 3-112 143-270 (378)
236 1w1z_A Delta-aminolevulinic ac 34.1 1.2E+02 0.004 25.6 6.9 43 9-67 152-194 (328)
237 1tv5_A Dhodehase, dihydroorota 34.1 33 0.0011 29.9 3.8 69 5-75 309-401 (443)
238 1gox_A (S)-2-hydroxy-acid oxid 34.0 32 0.0011 28.9 3.6 20 96-115 296-315 (370)
239 1o4u_A Type II quinolic acid p 33.9 59 0.002 26.6 5.1 43 68-111 212-270 (285)
240 3bjs_A Mandelate racemase/muco 33.8 94 0.0032 26.4 6.6 50 4-67 183-234 (428)
241 1viz_A PCRB protein homolog; s 33.7 24 0.00081 28.2 2.6 58 9-80 22-88 (240)
242 1ub3_A Aldolase protein; schif 33.5 1E+02 0.0036 24.0 6.3 95 6-108 70-204 (220)
243 3khj_A Inosine-5-monophosphate 33.3 80 0.0027 26.5 6.0 52 10-75 107-172 (361)
244 3e02_A Uncharacterized protein 33.1 63 0.0022 26.8 5.2 48 6-59 31-78 (311)
245 1u83_A Phosphosulfolactate syn 33.0 66 0.0023 26.4 5.2 39 8-57 111-149 (276)
246 2nzl_A Hydroxyacid oxidase 1; 32.1 69 0.0024 27.2 5.4 79 11-115 264-342 (392)
247 1tkk_A Similar to chloromucona 32.0 1.3E+02 0.0043 24.7 7.0 98 2-112 137-271 (366)
248 1eye_A DHPS 1, dihydropteroate 32.0 85 0.0029 25.5 5.8 75 4-85 26-118 (280)
249 2qde_A Mandelate racemase/muco 31.9 1.3E+02 0.0043 25.1 7.0 52 2-67 142-194 (397)
250 3vzx_A Heptaprenylglyceryl pho 31.7 53 0.0018 26.0 4.3 54 11-78 22-84 (228)
251 1h7n_A 5-aminolaevulinic acid 31.5 1.5E+02 0.005 25.2 7.1 43 9-67 161-204 (342)
252 3w01_A Heptaprenylglyceryl pho 31.4 61 0.0021 25.8 4.7 54 11-78 27-89 (235)
253 2bmb_A Folic acid synthesis pr 30.7 78 0.0027 28.4 5.7 73 5-84 247-348 (545)
254 1pv8_A Delta-aminolevulinic ac 30.2 1.5E+02 0.005 25.0 6.9 20 68-87 244-264 (330)
255 1vrd_A Inosine-5'-monophosphat 30.2 2E+02 0.007 24.6 8.2 94 7-113 236-373 (494)
256 2b7n_A Probable nicotinate-nuc 30.0 66 0.0023 25.9 4.8 44 68-112 201-260 (273)
257 1wv2_A Thiazole moeity, thiazo 29.8 1E+02 0.0036 25.1 5.9 19 96-114 203-221 (265)
258 3hgj_A Chromate reductase; TIM 29.1 2.4E+02 0.0082 23.1 8.7 21 8-28 153-173 (349)
259 2yci_X 5-methyltetrahydrofolat 28.9 2.2E+02 0.0076 22.7 8.8 117 4-131 31-196 (271)
260 3ewb_X 2-isopropylmalate synth 28.8 47 0.0016 27.0 3.7 51 7-60 80-130 (293)
261 2vef_A Dihydropteroate synthas 28.4 43 0.0015 27.8 3.4 68 5-79 31-116 (314)
262 1rvk_A Isomerase/lactonizing e 28.3 2E+02 0.0068 23.6 7.6 57 4-67 148-205 (382)
263 3vkj_A Isopentenyl-diphosphate 28.0 91 0.0031 26.3 5.4 19 10-28 201-219 (368)
264 3r2g_A Inosine 5'-monophosphat 28.0 1.4E+02 0.0049 25.1 6.7 23 4-26 96-118 (361)
265 3out_A Glutamate racemase; str 27.9 2.3E+02 0.0078 22.5 8.4 68 54-124 24-92 (268)
266 2ovl_A Putative racemase; stru 27.4 1.8E+02 0.0062 23.8 7.2 50 5-67 146-196 (371)
267 3obk_A Delta-aminolevulinic ac 27.3 97 0.0033 26.4 5.4 21 6-26 72-92 (356)
268 1nu5_A Chloromuconate cycloiso 27.0 1.4E+02 0.0049 24.4 6.4 52 3-67 140-193 (370)
269 3mcm_A 2-amino-4-hydroxy-6-hyd 26.9 97 0.0033 27.1 5.5 46 5-57 210-256 (442)
270 3nvt_A 3-deoxy-D-arabino-heptu 26.8 1.8E+02 0.006 24.7 7.1 50 9-59 328-377 (385)
271 3q58_A N-acetylmannosamine-6-p 26.5 54 0.0019 25.6 3.5 59 40-110 29-109 (229)
272 2ps2_A Putative mandelate race 26.1 1.2E+02 0.0043 24.8 5.9 94 3-111 144-271 (371)
273 1ydn_A Hydroxymethylglutaryl-C 26.0 28 0.00097 28.0 1.8 46 11-59 83-128 (295)
274 3ozy_A Putative mandelate race 25.9 1.8E+02 0.0062 24.2 7.0 50 4-67 150-200 (389)
275 1w5q_A Delta-aminolevulinic ac 25.7 2.2E+02 0.0074 24.0 7.2 43 9-67 157-199 (337)
276 4af0_A Inosine-5'-monophosphat 25.5 1.6E+02 0.0056 26.5 6.8 21 7-27 280-300 (556)
277 2gdq_A YITF; mandelate racemas 25.5 1.7E+02 0.0057 24.3 6.6 51 4-67 135-189 (382)
278 3ajx_A 3-hexulose-6-phosphate 25.4 69 0.0024 23.8 3.9 42 68-109 76-135 (207)
279 1zco_A 2-dehydro-3-deoxyphosph 25.4 2.3E+02 0.0079 22.5 7.2 49 10-59 210-258 (262)
280 1tre_A Triosephosphate isomera 24.9 64 0.0022 26.1 3.7 26 90-115 75-100 (255)
281 1w1z_A Delta-aminolevulinic ac 24.9 1.2E+02 0.0042 25.5 5.5 56 7-67 64-120 (328)
282 1rqb_A Transcarboxylase 5S sub 24.9 2.1E+02 0.0071 25.5 7.4 31 2-32 110-142 (539)
283 3ceu_A Thiamine phosphate pyro 24.8 69 0.0024 24.2 3.8 86 10-110 16-115 (210)
284 3oix_A Putative dihydroorotate 24.7 2.2E+02 0.0076 23.6 7.2 57 5-67 139-198 (345)
285 3igs_A N-acetylmannosamine-6-p 24.7 56 0.0019 25.5 3.3 60 40-111 29-110 (232)
286 4e8g_A Enolase, mandelate race 24.7 3E+02 0.01 22.9 8.5 96 2-111 161-290 (391)
287 2jbm_A Nicotinate-nucleotide p 24.2 1.4E+02 0.0046 24.4 5.7 44 68-112 216-275 (299)
288 1u1j_A 5-methyltetrahydroptero 24.2 1.4E+02 0.0046 27.8 6.2 75 7-86 585-682 (765)
289 3vk5_A MOEO5; TIM barrel, tran 24.0 2.5E+02 0.0085 23.0 7.2 58 7-78 53-125 (286)
290 2dvm_A Malic enzyme, 439AA lon 23.9 37 0.0013 29.6 2.3 28 5-33 114-141 (439)
291 1b9b_A TIM, protein (triosepho 23.9 61 0.0021 26.2 3.4 26 90-115 76-101 (255)
292 3jr2_A Hexulose-6-phosphate sy 23.5 1.9E+02 0.0064 21.8 6.1 18 12-29 75-92 (218)
293 2dqw_A Dihydropteroate synthas 23.1 32 0.0011 28.4 1.6 75 5-86 50-141 (294)
294 1ydo_A HMG-COA lyase; TIM-barr 23.0 57 0.0019 26.7 3.1 46 11-59 85-130 (307)
295 2og9_A Mandelate racemase/muco 22.8 2.5E+02 0.0086 23.2 7.3 50 5-67 162-212 (393)
296 3kxq_A Triosephosphate isomera 22.8 74 0.0025 26.0 3.7 27 90-116 100-126 (275)
297 3toy_A Mandelate racemase/muco 22.7 2.3E+02 0.008 23.5 7.1 53 2-67 164-218 (383)
298 3uhf_A Glutamate racemase; str 22.7 3E+02 0.01 22.0 7.5 65 54-121 41-106 (274)
299 2oz8_A MLL7089 protein; struct 22.5 2.2E+02 0.0074 23.6 6.8 91 5-109 145-273 (389)
300 1qop_A Tryptophan synthase alp 22.5 2.8E+02 0.0096 21.7 9.9 22 9-30 111-132 (268)
301 3ro6_B Putative chloromuconate 22.4 2.4E+02 0.0082 23.0 7.0 97 2-112 137-269 (356)
302 1x1o_A Nicotinate-nucleotide p 22.4 75 0.0026 25.9 3.7 44 68-112 215-271 (286)
303 2yc6_A Triosephosphate isomera 22.4 67 0.0023 26.0 3.4 26 90-115 76-101 (257)
304 3r12_A Deoxyribose-phosphate a 22.3 1.3E+02 0.0045 24.3 5.2 41 68-108 185-244 (260)
305 1ney_A TIM, triosephosphate is 22.2 61 0.0021 26.1 3.1 26 90-115 74-99 (247)
306 2pgw_A Muconate cycloisomerase 22.2 2.2E+02 0.0074 23.5 6.7 50 4-67 146-195 (384)
307 1vs1_A 3-deoxy-7-phosphoheptul 22.1 2.4E+02 0.0082 22.7 6.7 48 11-59 226-273 (276)
308 3sjn_A Mandelate racemase/muco 22.1 1.3E+02 0.0045 24.9 5.3 50 7-67 148-198 (374)
309 4e5t_A Mandelate racemase / mu 22.0 2.1E+02 0.0073 23.9 6.7 63 3-67 149-213 (404)
310 2p10_A MLL9387 protein; putati 22.0 1.5E+02 0.0051 24.4 5.5 100 12-129 175-280 (286)
311 3ffs_A Inosine-5-monophosphate 21.7 2.3E+02 0.0078 24.1 6.8 17 10-26 195-211 (400)
312 4g1k_A Triosephosphate isomera 21.5 64 0.0022 26.4 3.1 27 90-116 100-126 (272)
313 3l4y_A Maltase-glucoamylase, i 21.5 1.9E+02 0.0066 27.3 6.8 54 2-55 300-356 (875)
314 1jcn_A Inosine monophosphate d 21.2 2.7E+02 0.0093 24.0 7.4 17 10-26 307-323 (514)
315 1jcn_A Inosine monophosphate d 21.1 1.8E+02 0.0063 25.1 6.2 94 8-114 255-392 (514)
316 3eeg_A 2-isopropylmalate synth 21.1 3.4E+02 0.012 22.1 8.2 114 6-133 27-166 (325)
317 3r0u_A Enzyme of enolase super 20.9 2.8E+02 0.0094 23.1 7.1 72 2-87 139-234 (379)
318 2btm_A TIM, protein (triosepho 20.7 59 0.002 26.2 2.7 26 90-115 74-99 (252)
319 1b73_A Glutamate racemase; iso 20.6 1.4E+02 0.0048 23.2 5.0 64 1-78 8-71 (254)
320 2nx9_A Oxaloacetate decarboxyl 20.6 2.2E+02 0.0074 24.8 6.5 73 2-87 93-192 (464)
321 1p4c_A L(+)-mandelate dehydrog 20.6 72 0.0025 26.8 3.4 21 96-116 294-314 (380)
322 3lpp_A Sucrase-isomaltase; gly 20.4 2.2E+02 0.0075 27.0 6.9 54 2-55 328-384 (898)
323 3dxi_A Putative aldolase; TIM 20.0 1.5E+02 0.005 24.5 5.1 32 18-60 154-185 (320)
No 1
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=100.00 E-value=8.4e-45 Score=308.33 Aligned_cols=165 Identities=31% Similarity=0.430 Sum_probs=157.1
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||||||+.+++|+|.+||++||+||++|+.++||+|
T Consensus 92 ~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gld 171 (298)
T 3eoo_A 92 TGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGID 171 (298)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHH
Confidence 6999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred -----------ecCCcccccCCCCHHHHhhh----------h----c-CCCCCHHHHHhCCccEEEechHHHHHHHHHHH
Q 037554 68 -----------ARADASFVEAPRNDNEANWV----------W----G-HTLHTPEELKAMGFHLTVHPLTALYASARALV 121 (173)
Q Consensus 68 -----------AGAD~ifv~g~~~~e~i~~i----------~----g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~a~~ 121 (173)
||||+||+|+++|.+++++| | | +|.++.+||+++||++||||++++++++.+|+
T Consensus 172 eai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~ 251 (298)
T 3eoo_A 172 AAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRAMNKAAL 251 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHHHHH
Confidence 99999999999999999999 1 2 57889999999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccch
Q 037554 122 DVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSNF 165 (173)
Q Consensus 122 ~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~~ 165 (173)
+++++|+++|++....+.+++++|+++++|+++|.+++++|...
T Consensus 252 ~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 295 (298)
T 3eoo_A 252 NFYETVRRDGTQKAAVPTMQTRAQLYDYLGYYAYEEKLDQLFNQ 295 (298)
T ss_dssp HHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCccchhhcCCCHHHHHHHcCHHHHHHHHHHHhcc
Confidence 99999999999998888889999999999999999988888543
No 2
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=100.00 E-value=1e-43 Score=301.98 Aligned_cols=162 Identities=28% Similarity=0.433 Sum_probs=144.8
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL----------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I----------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||||||+.+++|+|++||++||+||++|+. ++||||
T Consensus 89 ~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 168 (302)
T 3fa4_A 89 TGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHG 168 (302)
T ss_dssp TTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCC
Confidence 6999999999999999999999999999999999999999999999999999999999985 789999
Q ss_pred -------------ecCCcccccCCCCHHHHhhh-----------h----c-CCCCCHHHHHhCCccEEEechHHHHHHHH
Q 037554 68 -------------ARADASFVEAPRNDNEANWV-----------W----G-HTLHTPEELKAMGFHLTVHPLTALYASAR 118 (173)
Q Consensus 68 -------------AGAD~ifv~g~~~~e~i~~i-----------~----g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~ 118 (173)
||||+||+|+++|.+++++| | | +|.+|.+||+++||++||||+++++++++
T Consensus 169 ldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~raa~~ 248 (302)
T 3fa4_A 169 YEESVARLRAARDAGADVGFLEGITSREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGPAVA 248 (302)
T ss_dssp HHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHHHHH
Confidence 99999999999999999988 1 2 46689999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccc
Q 037554 119 ALVDVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSN 164 (173)
Q Consensus 119 a~~~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~ 164 (173)
+|++++++|+++|++.. +.+++++|+++++|+++|.++|++|..
T Consensus 249 A~~~~~~~i~~~g~~~~--~~~~~~~el~~~~g~~~~~~~~~~~~~ 292 (302)
T 3fa4_A 249 AMREAMEKLKRDGIPGL--DKEMTPQMLFRVCGLDESMKVDAQAGG 292 (302)
T ss_dssp HHHHHHHHHHHHSSCCC--CTTCCHHHHHHHTTHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCCCCc--ccCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 99999999999998653 667899999999999999999999974
No 3
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=100.00 E-value=9.4e-43 Score=296.57 Aligned_cols=164 Identities=34% Similarity=0.545 Sum_probs=154.9
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||||||+.+++|+|.+|+++||+|+++| ++||+|
T Consensus 98 ~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~~~~~I~ARtda~~~~g~~ 175 (305)
T 3ih1_A 98 TGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--APSLYIVARTDARGVEGLD 175 (305)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--CTTSEEEEEECCHHHHCHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--CCCeEEEEeeccccccCHH
Confidence 69999999999999999999999999999999999999999999999999999999999 688888
Q ss_pred -----------ecCCcccccCCCCHHHHhhh----------h----c-CCCCCHHHHHhCCccEEEechHHHHHHHHHHH
Q 037554 68 -----------ARADASFVEAPRNDNEANWV----------W----G-HTLHTPEELKAMGFHLTVHPLTALYASARALV 121 (173)
Q Consensus 68 -----------AGAD~ifv~g~~~~e~i~~i----------~----g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~a~~ 121 (173)
||||+||++++++.+++++| + | +|.++.+||+++||++||||++++++++++|+
T Consensus 176 ~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa~~a~~ 255 (305)
T 3ih1_A 176 EAIERANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRVAAKAYE 255 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHHHHHHHH
Confidence 99999999999999999999 1 3 57889999999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccchh
Q 037554 122 DVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSNFK 166 (173)
Q Consensus 122 ~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~~~ 166 (173)
+++++|+++|++....+.+++++|+++++|+++|.++|++|.+..
T Consensus 256 ~~~~~i~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~ 300 (305)
T 3ih1_A 256 NVFTLIKETGSQKDALSNMQTRSELYETISYHDFEELDTGIAKTV 300 (305)
T ss_dssp HHHHHHHHHSSCGGGGGGSCCHHHHHHHTTHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCCcccchhcCCCHHHHHHHcChHHHHHHHHhhcccc
Confidence 999999999999888888899999999999999999999997654
No 4
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=100.00 E-value=4.1e-43 Score=298.97 Aligned_cols=162 Identities=31% Similarity=0.471 Sum_probs=144.6
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL----------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I----------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||||||+.+++|+|++||++||+||++|+. ++||+|
T Consensus 97 ~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 176 (307)
T 3lye_A 97 TGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLG 176 (307)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccC
Confidence 6999999999999999999999999999999999999999999999999999999999985 789999
Q ss_pred -------------ecCCcccccCCCCHHHHhhh-----------h----c-CCCCCHHHHHhCCccEEEechHHHHHHHH
Q 037554 68 -------------ARADASFVEAPRNDNEANWV-----------W----G-HTLHTPEELKAMGFHLTVHPLTALYASAR 118 (173)
Q Consensus 68 -------------AGAD~ifv~g~~~~e~i~~i-----------~----g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~ 118 (173)
||||+||+|++++.+++++| | | +|.++.+||+++||++|+||+++++++++
T Consensus 177 ldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~raa~~ 256 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAPAYA 256 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHHHHH
Confidence 99999999999999999988 1 2 56789999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccc
Q 037554 119 ALVDVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSN 164 (173)
Q Consensus 119 a~~~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~ 164 (173)
+|++++++|+++|++.. +.+++++|+++++|+++|.++|++|..
T Consensus 257 a~~~~~~~l~~~g~~~~--~~~~~~~el~~~~g~~~~~~~~~~~~~ 300 (307)
T 3lye_A 257 AIRETLVRLRDHGVVGT--PDGITPVRLFEVCGLQDAMEVDNGAGG 300 (307)
T ss_dssp HHHHHHHHHHHHSCCCC--CTTCCHHHHHHHTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCc--cccCCHHHHHHhcChHHHHHHHHHhCc
Confidence 99999999999999853 667899999999999999999999974
No 5
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=100.00 E-value=2.9e-41 Score=286.34 Aligned_cols=168 Identities=35% Similarity=0.440 Sum_probs=154.3
Q ss_pred CCCC-ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE------------
Q 037554 1 TGGG-NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------ 67 (173)
Q Consensus 1 tGyG-~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------ 67 (173)
+||| ++.|+.+||++|+++||+|||||||++||+|||..|++|+|.++++.||+|+++++.+++|+|
T Consensus 87 ~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl 166 (295)
T 1xg4_A 87 IGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGL 166 (295)
T ss_dssp TCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCH
T ss_pred cccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCH
Confidence 6999 899999999999999999999999999999999999999999999999999999998889998
Q ss_pred ------------ecCCcccccCCCCHHHHhhh----------h----c-CCCCCHHHHHhCCccEEEechHHHHHHHHHH
Q 037554 68 ------------ARADASFVEAPRNDNEANWV----------W----G-HTLHTPEELKAMGFHLTVHPLTALYASARAL 120 (173)
Q Consensus 68 ------------AGAD~ifv~g~~~~e~i~~i----------~----g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~a~ 120 (173)
||||+||++++++.+++++| | | +|.++.++|+++||++||||++++++++.+|
T Consensus 167 ~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa~~a~ 246 (295)
T 1xg4_A 167 DAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAA 246 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHHHHHHHH
Confidence 89999999999999999998 2 2 5789999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccchhhHh
Q 037554 121 VDVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSNFKKAV 169 (173)
Q Consensus 121 ~~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~~~~~~ 169 (173)
.+.+++|+++|++....+.+++++|+++++|+++|.+++++|. +++||
T Consensus 247 ~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~-~~~~~ 294 (295)
T 1xg4_A 247 EHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLF-ARSQV 294 (295)
T ss_dssp HHHHHHHHHHSSSGGGGGGSCCHHHHHHHTTHHHHHHHHHC--------
T ss_pred HHHHHHHHHhCCcccccccCCCHHHHHHHcCHHHHHHHHHHHh-hhhhc
Confidence 9999999999999888888889999999999999999999998 55565
No 6
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=100.00 E-value=2.7e-41 Score=288.95 Aligned_cols=163 Identities=66% Similarity=1.093 Sum_probs=155.5
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------- 67 (173)
+|||++.|+.|||++|+++||+|||||||++||+|||+.|++|+|.+++++||+|+++++.+++|+|
T Consensus 110 ~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~ 189 (318)
T 1zlp_A 110 TGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLE 189 (318)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHH
Confidence 6999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred -----------ecCCcccccCCCCHHHHhhh----------h----c-CCCCCHHHHHhCCccEEEechHHHHHHHHHHH
Q 037554 68 -----------ARADASFVEAPRNDNEANWV----------W----G-HTLHTPEELKAMGFHLTVHPLTALYASARALV 121 (173)
Q Consensus 68 -----------AGAD~ifv~g~~~~e~i~~i----------~----g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~a~~ 121 (173)
||||+||++++++.+++++| | | +|.++.+||+++||++||||++++++++++|+
T Consensus 190 ~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~~a~~ 269 (318)
T 1zlp_A 190 EGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYATARALV 269 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHHHHHHHH
Confidence 89999999999999999998 1 2 57899999999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhccc
Q 037554 122 DVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYS 163 (173)
Q Consensus 122 ~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~ 163 (173)
+.+++|+++|++....+.+++++|+++++++++|.+++++|.
T Consensus 270 ~~~~~l~~~g~~~~~~~~~~~~~el~~l~~~~~~~~~~~~~~ 311 (318)
T 1zlp_A 270 NIMKILKEKGTTRDDLDQMATFSEFNELISLESWYEMESKFK 311 (318)
T ss_dssp HHHHHHHHHSCSTTCGGGSCCHHHHHHHHTHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCcccccccCCCHHHHHHhcCHHHHHHHHHHhc
Confidence 999999999999887788899999999999999999999993
No 7
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.9e-41 Score=283.05 Aligned_cols=160 Identities=28% Similarity=0.320 Sum_probs=150.4
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||||||..++ |+|++|+++||+|+++++.+++|+|
T Consensus 91 ~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ 169 (287)
T 3b8i_A 91 HGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDA 169 (287)
T ss_dssp TCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHH
Confidence 69999999999999999999999999999999999999999 9999999999999999998889998
Q ss_pred ----------ecCCcccccCCCCHHHHhhh-----------h-c-CCCCCHHHHHhCCccEEEechHHHHHHHHHHHHHH
Q 037554 68 ----------ARADASFVEAPRNDNEANWV-----------W-G-HTLHTPEELKAMGFHLTVHPLTALYASARALVDVL 124 (173)
Q Consensus 68 ----------AGAD~ifv~g~~~~e~i~~i-----------~-g-~p~~~~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~ 124 (173)
||||+||++++++.+++++| + | +|.++.+||+++||++||||++++++++++ ++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~~a---~~ 246 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKA---TY 246 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCCSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHHHHHH---HH
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHHHHHH---HH
Confidence 89999999999999999999 1 3 567999999999999999999999999999 89
Q ss_pred HHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccchh
Q 037554 125 KTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSNFK 166 (173)
Q Consensus 125 ~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~~~ 166 (173)
++|+++|++. .+.+++++|+++++++++|.+++++|.+.+
T Consensus 247 ~~l~~~g~~~--~~~~~~~~el~~l~~~~~~~~~~~~~~~~~ 286 (287)
T 3b8i_A 247 DCLREERGAV--ASDLTASELSKKYTFPEEYQAWARDYMEVK 286 (287)
T ss_dssp HHHHHHHTCC--CCCSCHHHHHHHTTCHHHHHHHHHHHHSCC
T ss_pred HHHHHcCCCC--cccCCCHHHHHHHhCHHHHHHHHHHhhccC
Confidence 9999999876 566789999999999999999999998654
No 8
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=100.00 E-value=2.8e-40 Score=279.71 Aligned_cols=164 Identities=28% Similarity=0.374 Sum_probs=149.4
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCC--CCcccCHHHHHHHHHHHHHhcCCCCEEE-----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMH--GKQIIPAEEHAAKIASARDAIGDSDFVL----------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~--g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||+|||+. +++|+|.+++++||+|+++++.+++|+|
T Consensus 84 ~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~ 163 (290)
T 2hjp_A 84 TGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGL 163 (290)
T ss_dssp TTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTC
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccc
Confidence 699999999999999999999999999999999999999 8999999999999999999998788988
Q ss_pred --------------ecCCcccccC-CCCHHHHhhhh---c-----------CCCCCHHHHHhCC-ccEEEechHHHHHHH
Q 037554 68 --------------ARADASFVEA-PRNDNEANWVW---G-----------HTLHTPEELKAMG-FHLTVHPLTALYASA 117 (173)
Q Consensus 68 --------------AGAD~ifv~g-~~~~e~i~~i~---g-----------~p~~~~~eL~~lG-v~~v~~~~~~~~aa~ 117 (173)
||||+||+++ +++.+++++|. . .|.++.+||+++| |++||||++++++++
T Consensus 164 g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~raa~ 243 (290)
T 2hjp_A 164 GQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRAAV 243 (290)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHHHH
Confidence 8999999999 99999999881 1 2457999999999 999999999999999
Q ss_pred HHHHHHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccc
Q 037554 118 RALVDVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSN 164 (173)
Q Consensus 118 ~a~~~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~ 164 (173)
++|++++++|+++|++....+.+++++|+++++++++|.+++++|.+
T Consensus 244 ~a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~~ 290 (290)
T 2hjp_A 244 GAVREVFARIRRDGGIREVDAALPSVKEIIELQGDERMRAVEARYLK 290 (290)
T ss_dssp HHHHHHHHHHHHHTSSTTTTTTSCCHHHHHHHTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCcccccccCCCHHHHHHHcCHHHHHHHHHhhcC
Confidence 99999999999999998877788999999999999999999999963
No 9
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=100.00 E-value=1.5e-39 Score=275.88 Aligned_cols=164 Identities=26% Similarity=0.369 Sum_probs=131.2
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCC--CcccCHHHHHHHHHHHHHhcCCCCEEE-----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHG--KQIIPAEEHAAKIASARDAIGDSDFVL----------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g--~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------- 67 (173)
+|||++.|+.+||++|+++||+|||||||++||+|||+.+ ++|+|.+|++.||+|+++++.+++|+|
T Consensus 88 ~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~ 167 (295)
T 1s2w_A 88 TGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGW 167 (295)
T ss_dssp SSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTC
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccc
Confidence 6999999999999999999999999999999999999985 899999999999999999998889998
Q ss_pred --------------ecCCcccccC-CCCHHHHhhhh---c--CC---------CCCHHHHHhCCccEEEechHHHHHHHH
Q 037554 68 --------------ARADASFVEA-PRNDNEANWVW---G--HT---------LHTPEELKAMGFHLTVHPLTALYASAR 118 (173)
Q Consensus 68 --------------AGAD~ifv~g-~~~~e~i~~i~---g--~p---------~~~~~eL~~lGv~~v~~~~~~~~aa~~ 118 (173)
||||+||+++ +.|.+++++|. . .| .++.+||+++||++||||++++++++.
T Consensus 168 g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~raa~~ 247 (295)
T 1s2w_A 168 GLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRASVS 247 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHHHHH
Confidence 8999999996 78899999982 1 23 367999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcccccccCCCHHHHHHhcChhhHHHHHhcccc
Q 037554 119 ALVDVLKTLKESGTTRDHLEKMGTFEEFNQLVNLESWFEIEGRYSN 164 (173)
Q Consensus 119 a~~~~~~~l~~~g~~~~~~~~~~~~~e~~~l~g~~~~~~~~~~y~~ 164 (173)
+|.+.+++|+++|++....+.+.+++|+++++|+++|.+++++|.+
T Consensus 248 a~~~~~~~i~~~g~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 293 (295)
T 1s2w_A 248 AIQQTTKQIYDDQSLVNVEDKIVSVKEIFRLQRDDELVQAEDKYLP 293 (295)
T ss_dssp HHHHHHHHHHHHSSSTTTGGGSCCHHHHHHC---------------
T ss_pred HHHHHHHHHHHcCCccchhhcCCCHHHHHHhcCHHHHHHHHHhhcc
Confidence 9999999999999998888888999999999999999999999975
No 10
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=100.00 E-value=4.1e-33 Score=245.74 Aligned_cols=135 Identities=33% Similarity=0.432 Sum_probs=123.3
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCC-CCccCCCCCCCcccCHHHHHHHHHHHHHhc--CCCCEEE----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQS-WPKKCGHMHGKQIIPAEEHAAKIASARDAI--GDSDFVL---------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~-~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~--~~~d~~I---------- 67 (173)
+|||++.||++||++|+++||+|||||||+ +||||||+.||.|+|++||++||+||++|+ .++||||
T Consensus 157 tGfG~~~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~ 236 (429)
T 1f8m_A 157 AGFGGALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAAT 236 (429)
T ss_dssp TTTSSHHHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCC
T ss_pred CCCCCcHHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhc
Confidence 799999999999999999999999999999 699999999999999999999999999998 4678877
Q ss_pred -----------------------------------------ecCCccccc-CCCCHHHHhhhh--------------c-C
Q 037554 68 -----------------------------------------ARADASFVE-APRNDNEANWVW--------------G-H 90 (173)
Q Consensus 68 -----------------------------------------AGAD~ifv~-g~~~~e~i~~i~--------------g-~ 90 (173)
.|||+||++ +++|.+++++|. + +
T Consensus 237 li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~s 316 (429)
T 1f8m_A 237 LITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCS 316 (429)
T ss_dssp EESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECC
T ss_pred cccccccccccccccCCCCcccccccccCHHHHHHHHHHHHhcCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCC
Confidence 379999998 478999999991 1 4
Q ss_pred CCCC-------------HHHHHhCCccEEEechHHHHHHHHHHHHHHHHHHHcCCccc
Q 037554 91 TLHT-------------PEELKAMGFHLTVHPLTALYASARALVDVLKTLKESGTTRD 135 (173)
Q Consensus 91 p~~~-------------~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~~~g~~~~ 135 (173)
|.++ .+||+++||++++||++++++++.+|.+.++.++++|++..
T Consensus 317 Psf~w~~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~raa~~a~~~~a~~~~~~G~~ay 374 (429)
T 1f8m_A 317 PSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAY 374 (429)
T ss_dssp TTSCHHHHCCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCcccccchhhHhHHHHHHHHcCCeEEEECcHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 5677 68999999999999999999999999999999999997654
No 11
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=100.00 E-value=2.2e-33 Score=247.32 Aligned_cols=135 Identities=26% Similarity=0.401 Sum_probs=111.2
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCC-CccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSW-PKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL---------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~-pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I---------- 67 (173)
||||++.||++||++|+++||+|||||||+. ||||||+.||.|+|++||++||+||++|+. ++||||
T Consensus 154 tGfG~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~ 233 (433)
T 3eol_A 154 AGFGDPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAK 233 (433)
T ss_dssp ---CCHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCC
T ss_pred CCCCCcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCcccc
Confidence 6999999999999999999999999999997 999999999999999999999999999975 566666
Q ss_pred -------------------------------------------ecCCcccccC-CCCHHHHhhhh--------------c
Q 037554 68 -------------------------------------------ARADASFVEA-PRNDNEANWVW--------------G 89 (173)
Q Consensus 68 -------------------------------------------AGAD~ifv~g-~~~~e~i~~i~--------------g 89 (173)
.|||+||++. ..+.+++++|. +
T Consensus 234 l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~ 313 (433)
T 3eol_A 234 LLTSDIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYN 313 (433)
T ss_dssp EESCCCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred ccccCcccccccceeccCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccC
Confidence 3599999965 47999999991 1
Q ss_pred -CCCCC-------------HHHHHhCCccEEEechHHHHHHHHHHHHHHHHHHHcCCccc
Q 037554 90 -HTLHT-------------PEELKAMGFHLTVHPLTALYASARALVDVLKTLKESGTTRD 135 (173)
Q Consensus 90 -~p~~~-------------~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~~~g~~~~ 135 (173)
+|.++ .+||+++||++|+||++++++++.+|.+.++.++++|++..
T Consensus 314 ~sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~~raa~~A~~~~a~~i~~~G~~ay 373 (433)
T 3eol_A 314 CSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHQLNYGMFELARGYKDRQMAAY 373 (433)
T ss_dssp CCSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCCcccccCChhHHhHHHHHHHHcCCeEEEeCcHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 45565 68999999999999999999999999999999999998654
No 12
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=99.98 E-value=2.3e-32 Score=241.03 Aligned_cols=134 Identities=29% Similarity=0.403 Sum_probs=121.6
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCC-CccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSW-PKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL---------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~-pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I---------- 67 (173)
+|||++.||++||++|+++||+|||||||+. ||||||+.|+.|+|++|+++||+||++|+. ++||||
T Consensus 161 tGfG~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~ 240 (439)
T 3i4e_A 161 AGFGGVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAAD 240 (439)
T ss_dssp TTTSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCC
T ss_pred CCCCccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccc
Confidence 7999999999999999999999999999997 999999999999999999999999999873 566666
Q ss_pred -----------------------------------------ecCCcccc-cCCCCHHHHhhh----------h----c-C
Q 037554 68 -----------------------------------------ARADASFV-EAPRNDNEANWV----------W----G-H 90 (173)
Q Consensus 68 -----------------------------------------AGAD~ifv-~g~~~~e~i~~i----------~----g-~ 90 (173)
.|||+||+ ++..+.+++++| + + +
T Consensus 241 l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~s 320 (439)
T 3i4e_A 241 LITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCS 320 (439)
T ss_dssp EESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred ccccccccccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCC
Confidence 67999999 557899999998 1 2 5
Q ss_pred CCCC-------------HHHHHhCCccEEEechHHHHHHHHHHHHHHHHHHHcCCcc
Q 037554 91 TLHT-------------PEELKAMGFHLTVHPLTALYASARALVDVLKTLKESGTTR 134 (173)
Q Consensus 91 p~~~-------------~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~~~g~~~ 134 (173)
|.++ .+||.++||++++||++++++++.+|.+.++.++++|+..
T Consensus 321 Psfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~~raa~~A~~~~a~~i~~~Gm~a 377 (439)
T 3i4e_A 321 PSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAHGYARTQMSA 377 (439)
T ss_dssp SSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 6666 7899999999999999999999999999999999999654
No 13
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=99.97 E-value=7e-32 Score=237.58 Aligned_cols=133 Identities=30% Similarity=0.423 Sum_probs=119.7
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCC-CccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSW-PKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL---------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~-pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I---------- 67 (173)
+|||++.|+++||++|+++||+|||||||+. ||||||+.+++|+|++||++||+||++|+. ++||||
T Consensus 161 tGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~ 240 (435)
T 3lg3_A 161 AGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAAD 240 (435)
T ss_dssp TCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCC
T ss_pred CCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccc
Confidence 7999999999999999999999999999997 999999999999999999999999999873 566666
Q ss_pred -----------------------------------------ecCCccccc-CCCCHHHHhhh----------h----c-C
Q 037554 68 -----------------------------------------ARADASFVE-APRNDNEANWV----------W----G-H 90 (173)
Q Consensus 68 -----------------------------------------AGAD~ifv~-g~~~~e~i~~i----------~----g-~ 90 (173)
.|||+||++ +..+.+++++| + + +
T Consensus 241 l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~s 320 (435)
T 3lg3_A 241 LLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCS 320 (435)
T ss_dssp EESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred ccccccccccchhhcccccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCC
Confidence 699999994 45799999998 1 2 5
Q ss_pred CCCC-------------HHHHHhCCccEEEechHHHHHHHHHHHHHHHHHHH-cCCc
Q 037554 91 TLHT-------------PEELKAMGFHLTVHPLTALYASARALVDVLKTLKE-SGTT 133 (173)
Q Consensus 91 p~~~-------------~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~~-~g~~ 133 (173)
|.++ .+||+++||++++||++++++++.+|.+.++.+++ .|+.
T Consensus 321 Psfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~raa~~a~~~~a~~~~~~~gm~ 377 (435)
T 3lg3_A 321 PSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGIHSMWFNMFDLAHAYAQGEGMK 377 (435)
T ss_dssp SSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 6666 79999999999999999999999999999999999 4443
No 14
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=99.97 E-value=3.4e-31 Score=222.63 Aligned_cols=144 Identities=22% Similarity=0.240 Sum_probs=128.2
Q ss_pred CCCC-ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE----------
Q 037554 1 TGGG-NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL---------- 67 (173)
Q Consensus 1 tGyG-~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I---------- 67 (173)
+||| ++.|+.+||++|+++||+|||||||+++ .+|+|+|++|+++||+|+++++. +++|+|
T Consensus 85 ~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~------~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~ 158 (275)
T 2ze3_A 85 AGYGHAPEDVRRTVEHFAALGVAGVNLEDATGL------TPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKG 158 (275)
T ss_dssp TCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSS------SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCC------CCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhcc
Confidence 6999 7999999999999999999999999873 57899999999999999999975 566766
Q ss_pred ---------------------ecCCcccccCCCCHHHHhhh--------h---cCCCCCHHHHHhCCccEEEechHHHHH
Q 037554 68 ---------------------ARADASFVEAPRNDNEANWV--------W---GHTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 68 ---------------------AGAD~ifv~g~~~~e~i~~i--------~---g~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
||||+||++++++.+++++| + ++|.++.+||+++||++||||++++++
T Consensus 159 ~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 159 HGATDEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEECTTHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 59999999999999999999 1 145789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCccccccc-CCCHHHHHHhcC
Q 037554 116 SARALVDVLKTLKESGTTRDHLEK-MGTFEEFNQLVN 151 (173)
Q Consensus 116 a~~a~~~~~~~l~~~g~~~~~~~~-~~~~~e~~~l~g 151 (173)
++++|.+.+++|+++| +....+. +++++|++++++
T Consensus 239 a~~a~~~~~~~i~~~g-~~~~~~~~~~~~~e~~~l~~ 274 (275)
T 2ze3_A 239 TLGLVQRMAAELHAAE-QSPLMDSYFLGFGEGHDLFH 274 (275)
T ss_dssp HHHHHHHHHHHHHHHS-CCHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CcccccccCCCHHHHHHHhc
Confidence 9999999999999999 7665443 468889988875
No 15
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=99.93 E-value=1.1e-25 Score=187.21 Aligned_cols=119 Identities=24% Similarity=0.262 Sum_probs=107.6
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL----------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I----------- 67 (173)
+|||++. .+|+++|+++||+|||||||. |..+++|+|++++++||+++++++. +++|+|
T Consensus 89 ~Gyg~~~--~~~~~~l~~aGa~gv~iEd~~------~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~ 160 (255)
T 2qiw_A 89 SGYGLSP--ADLIAQILEAGAVGINVEDVV------HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGA 160 (255)
T ss_dssp TCTTCCH--HHHHHHHHHTTCCEEEECSEE------GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCT
T ss_pred CCcCcHH--HHHHHHHHHcCCcEEEECCCC------CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccC
Confidence 6899755 999999999999999999998 5567899999999999999999976 578877
Q ss_pred -------------------ecCCcccccCCCCHHHHhhh--------h------c-CCCCCHHHHHhCCccEEEechHHH
Q 037554 68 -------------------ARADASFVEAPRNDNEANWV--------W------G-HTLHTPEELKAMGFHLTVHPLTAL 113 (173)
Q Consensus 68 -------------------AGAD~ifv~g~~~~e~i~~i--------~------g-~p~~~~~eL~~lGv~~v~~~~~~~ 113 (173)
||||+||++++.+.+++++| + + +|.+|++||+++||+|||||++
T Consensus 161 ~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~-- 238 (255)
T 2qiw_A 161 DVFEDPMVEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL-- 238 (255)
T ss_dssp TTSSSHHHHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH--
T ss_pred CcchHHHHHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH--
Confidence 89999999999999999998 1 1 4668999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 037554 114 YASARALVDVLKTLKESG 131 (173)
Q Consensus 114 ~aa~~a~~~~~~~l~~~g 131 (173)
++++|++++++|+++|
T Consensus 239 --a~~a~~~~~~~i~~~g 254 (255)
T 2qiw_A 239 --WQKWLAATSAQQLKGW 254 (255)
T ss_dssp --HHHHHHHHHHHHHGGG
T ss_pred --HHHHHHHHHHHHHhcC
Confidence 9999999999999876
No 16
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=99.92 E-value=9.9e-27 Score=209.43 Aligned_cols=129 Identities=26% Similarity=0.338 Sum_probs=107.8
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCC-CccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE----------
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSW-PKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL---------- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~-pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I---------- 67 (173)
||||++.||++||+.|+++||+|||||||+. ||||||+.||.|+|++||++||+||++++. ++||||
T Consensus 171 tGfG~~~nv~~tvk~~ieAGaAGihIEDQ~~~~KkCGH~~GK~Lvp~ee~v~rI~AAr~A~d~~g~d~vIiARTDA~~~~ 250 (538)
T 1dqu_A 171 TGHGGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGTDLLAIARTDSEAAT 250 (538)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCSEEEECSBCTTCC------CEEECCHHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGEE
T ss_pred CcCCchHHHHHHHHHHHHcCCeEEEeeccCCCCCCcCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEecccccc
Confidence 7999999999999999999999999999995 999999999999999999999999999975 678888
Q ss_pred -----------------------ecCCcccccCC---CCHHHHhhhh----c-C-----CCCCHHHHHh--CCc---cEE
Q 037554 68 -----------------------ARADASFVEAP---RNDNEANWVW----G-H-----TLHTPEELKA--MGF---HLT 106 (173)
Q Consensus 68 -----------------------AGAD~ifv~g~---~~~e~i~~i~----g-~-----p~~~~~eL~~--lGv---~~v 106 (173)
+|||+ |+++. .+.++|.+++ . . |....++|.+ .|+ +++
T Consensus 251 ~l~~aI~~R~~ay~~G~~~~~~~AGAD~-~~~~~~~G~~~~ei~~~~~~~~~~~nl~~~~e~~~~~l~~~~~g~~~~~~~ 329 (538)
T 1dqu_A 251 LITSTIDHRDHPFIIGSTNPDIQPLNDL-MVMAEQAGKNGAELQAIEDEWLAKAGLKLFNDAVVDAINNSPLPNKKAAIE 329 (538)
T ss_dssp EESCTTCGGGGGGEEEECCTTSCCHHHH-HHHHHHSCCCSHHHHHHHHHHHHHSCEECSHHHHHHHHHTSSCSCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCCccchHH-HHHHHhcCCCHHHHHHHHHHhcCCCceEecchHHHHHHHhcccCccHHHHH
Confidence 58888 77643 6889999882 1 2 3345688887 888 899
Q ss_pred EechHHHHHHHHHHHHHHHHHHHc
Q 037554 107 VHPLTALYASARALVDVLKTLKES 130 (173)
Q Consensus 107 ~~~~~~~~aa~~a~~~~~~~l~~~ 130 (173)
+|.+++.++++.+|++.++.|...
T Consensus 330 ~y~~~~~r~s~~~~r~~A~~i~g~ 353 (538)
T 1dqu_A 330 KYLTQSKGKSNLEARAIAKEIAGT 353 (538)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHSS
T ss_pred HHHHHhccccHHHHHHHHHHHcCC
Confidence 999999999999999999999754
No 17
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=99.08 E-value=6e-11 Score=99.37 Aligned_cols=76 Identities=21% Similarity=0.204 Sum_probs=57.6
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCC------------ccCCCCCCCc----------cc--C---HHHHHHHHH
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWP------------KKCGHMHGKQ----------II--P---AEEHAAKIA 54 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~p------------Krcg~~~g~~----------l~--~---~ee~~~kI~ 54 (173)
||+++.++.||+++|+++||+||+||||..+ ++|||...++ +. + .++.+++.+
T Consensus 101 sY~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~ 180 (275)
T 3vav_A 101 TYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDAR 180 (275)
T ss_dssp SCSSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHH
Confidence 5999999999999999999999999999988 9999975321 11 1 122333333
Q ss_pred HHHHhcCCCCEEEecCCcccccCCCCHHHHhhh
Q 037554 55 SARDAIGDSDFVLARADASFVEAPRNDNEANWV 87 (173)
Q Consensus 55 Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i 87 (173)
|..+ ||||+||++++.+. ++++|
T Consensus 181 a~~e---------AGA~~ivlE~vp~~-~a~~I 203 (275)
T 3vav_A 181 AVEE---------AGAQLIVLEAVPTL-VAAEV 203 (275)
T ss_dssp HHHH---------HTCSEEEEESCCHH-HHHHH
T ss_pred HHHH---------cCCCEEEecCCCHH-HHHHH
Confidence 2222 89999999999775 78887
No 18
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=98.75 E-value=4.6e-09 Score=87.48 Aligned_cols=67 Identities=13% Similarity=0.039 Sum_probs=53.7
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC---------------CCCEEE
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG---------------DSDFVL 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~---------------~~d~~I 67 (173)
|+++.++.+|+++|+++||+||+|||+ ++++++|++++++.. ..+|.|
T Consensus 90 y~~~~~a~~~a~rl~kaGa~aVklEgg-----------------~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v 152 (264)
T 1m3u_A 90 YATPEQAFENAATVMRAGANMVKIEGG-----------------EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKV 152 (264)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEECCCS-----------------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCC
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEECCc-----------------HHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEE
Confidence 448899999999999999999999998 368888888887641 023434
Q ss_pred --------------------ecCCcccccCCCCHHHHhhh
Q 037554 68 --------------------ARADASFVEAPRNDNEANWV 87 (173)
Q Consensus 68 --------------------AGAD~ifv~g~~~~e~i~~i 87 (173)
||||+||++++. .+.+++|
T Consensus 153 ~grt~~~a~~~i~rA~a~~eAGA~~ivlE~vp-~~~a~~i 191 (264)
T 1m3u_A 153 QGRGDEAGDQLLSDALALEAAGAQLLVLECVP-VELAKRI 191 (264)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCCEEEEESCC-HHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHHHCCCcEEEEecCC-HHHHHHH
Confidence 999999999986 5777777
No 19
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=98.74 E-value=1.1e-08 Score=85.61 Aligned_cols=68 Identities=19% Similarity=0.003 Sum_probs=51.2
Q ss_pred CCC-ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC---------------CCCE
Q 037554 2 GGG-NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG---------------DSDF 65 (173)
Q Consensus 2 GyG-~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~---------------~~d~ 65 (173)
+|+ ++.++.+++++|+++||+||+|||+ +++++||++++++.. ..+|
T Consensus 89 sy~~s~~~a~~na~rl~kaGa~aVklEdg-----------------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf 151 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMAAGAHMVKLEGG-----------------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGY 151 (275)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCSEEEEECS-----------------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC----
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEECCc-----------------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCe
Confidence 344 5888999999999999999999998 267777887777631 1234
Q ss_pred EE-------------------ecCCcccccCCCCHHHHhhh
Q 037554 66 VL-------------------ARADASFVEAPRNDNEANWV 87 (173)
Q Consensus 66 ~I-------------------AGAD~ifv~g~~~~e~i~~i 87 (173)
.| ||||+||++++. .+++++|
T Consensus 152 ~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp-~~~a~~i 191 (275)
T 1o66_A 152 KVQGRGGKAQALLNDAKAHDDAGAAVVLMECVL-AELAKKV 191 (275)
T ss_dssp -------CHHHHHHHHHHHHHTTCSEEEEESCC-HHHHHHH
T ss_pred EEEeChHHHHHHHHHHHHHHHcCCcEEEEecCC-HHHHHHH
Confidence 33 999999999986 5777777
No 20
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=98.54 E-value=8.7e-08 Score=80.42 Aligned_cols=68 Identities=22% Similarity=0.101 Sum_probs=48.4
Q ss_pred CCC-ChHHHHHHHHHHHH-hCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC---------------CCC
Q 037554 2 GGG-NALNVQRTVKDLVA-AGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG---------------DSD 64 (173)
Q Consensus 2 GyG-~~~~v~rtv~~~~~-aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~---------------~~d 64 (173)
+|+ ++.++.+++.++.+ +||+||+|||+ +++++||++++++.. ..+
T Consensus 106 sy~~s~~~a~~na~rl~~eaGa~aVklEdg-----------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~gg 168 (281)
T 1oy0_A 106 SYEAGPTAALAAATRFLKDGGAHAVKLEGG-----------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGG 168 (281)
T ss_dssp SSTTCHHHHHHHHHHHHHTTCCSEEEEEBS-----------------GGGHHHHHHHHHHTCCEEEEEECCC--------
T ss_pred cccCCHHHHHHHHHHHHHHhCCeEEEECCc-----------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCC
Confidence 344 57888887666665 99999999998 267777777777641 123
Q ss_pred EEE-------------------ecCCcccccCCCCHHHHhhh
Q 037554 65 FVL-------------------ARADASFVEAPRNDNEANWV 87 (173)
Q Consensus 65 ~~I-------------------AGAD~ifv~g~~~~e~i~~i 87 (173)
|.| ||||+||++++. .+.+++|
T Consensus 169 f~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp-~~~a~~i 209 (281)
T 1oy0_A 169 FRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVP-AELATQI 209 (281)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCSEEEEESCC-HHHHHHH
T ss_pred eEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCC-HHHHHHH
Confidence 333 999999999986 5777777
No 21
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=93.36 E-value=0.27 Score=40.44 Aligned_cols=73 Identities=15% Similarity=0.168 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++..+ +++
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~--------GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A 86 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVA--------GTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYA 86 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEET--------STTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC--------ccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHH
Confidence 34567899999999999999864 444445678999999999999988654 433
Q ss_pred --ecCCcccccCC-----CCHHHHhhh
Q 037554 68 --ARADASFVEAP-----RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~-----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 87 ~~~Gadavlv~~P~y~~~~s~~~l~~~ 113 (286)
T 2r91_A 87 ESRGAEAVASLPPYYFPRLSERQIAKY 113 (286)
T ss_dssp HHTTCSEEEECCSCSSTTCCHHHHHHH
T ss_pred HhcCCCEEEEcCCcCCCCCCHHHHHHH
Confidence 89999886433 255665544
No 22
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=92.61 E-value=0.59 Score=38.49 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=55.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++..+ ..+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~--------GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 90 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVC--------GTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAH 90 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEES--------STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC--------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 34567899999999999999874 444445678999999999999987643 33444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 91 A~~~Gadavlv~~P~y~~~s~~~l~~~ 117 (294)
T 2ehh_A 91 AKEVGADGALVVVPYYNKPTQRGLYEH 117 (294)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987443 366665544
No 23
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=92.51 E-value=0.31 Score=40.07 Aligned_cols=87 Identities=14% Similarity=0.178 Sum_probs=62.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------- 67 (173)
|.....+.++.+++.|+.||.+==+ ++.-..++.+|..+=++.++++..+ +++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~Gt--------TGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A 87 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGT--------TGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFS 87 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST--------TTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHH
Confidence 3466889999999999999986444 3445678999999999998887654 333
Q ss_pred --ecCCcccccCC-----CCHHHHhhh-----h--cCC------------CCCHHHHHhC
Q 037554 68 --ARADASFVEAP-----RNDNEANWV-----W--GHT------------LHTPEELKAM 101 (173)
Q Consensus 68 --AGAD~ifv~g~-----~~~e~i~~i-----~--g~p------------~~~~~eL~~l 101 (173)
+|||++++..+ .+.+++.+. + ..| .++++.+.+|
T Consensus 88 ~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 88 NEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 89999876432 355665544 1 122 3688888888
No 24
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.44 E-value=0.69 Score=37.96 Aligned_cols=75 Identities=16% Similarity=0.223 Sum_probs=54.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gtt--------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 90 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTT--------GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVF 90 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHH
Confidence 34667899999999999999864443 445678999999999999987653 33444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 91 a~~~Gadavlv~~P~y~~~s~~~l~~~ 117 (289)
T 2yxg_A 91 AEDVGADAVLSITPYYNKPTQEGLRKH 117 (289)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999887443 366665544
No 25
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=92.40 E-value=0.68 Score=38.08 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-+ ++.-..++.+|..+=++.++++..+ ..+++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 91 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGT--------TGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQR 91 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHH
Confidence 3466889999999999999987444 3445678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 92 a~~~Gadavlv~~P~y~~~s~~~l~~~ 118 (292)
T 2ojp_A 92 FNDSGIVGCLTVTPYYNRPSQEGLYQH 118 (292)
T ss_dssp TTTSSCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999887443 366665544
No 26
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=92.38 E-value=0.38 Score=39.67 Aligned_cols=73 Identities=11% Similarity=0.142 Sum_probs=53.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ +++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~Gtt--------GE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A 87 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTT--------GLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLS 87 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTT--------TTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHH
Confidence 34667899999999999999865443 345678999999999999887654 333
Q ss_pred --ecCCcccccCC-----CCHHHHhhh
Q 037554 68 --ARADASFVEAP-----RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~-----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 88 ~~~Gadavlv~~P~y~~~~s~~~l~~~ 114 (293)
T 1w3i_A 88 KDFDIVGIASYAPYYYPRMSEKHLVKY 114 (293)
T ss_dssp GGSCCSEEEEECCCSCSSCCHHHHHHH
T ss_pred HhcCCCEEEEcCCCCCCCCCHHHHHHH
Confidence 89999986433 355665544
No 27
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.24 E-value=0.76 Score=37.98 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC--CCEEE---------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD--SDFVL--------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~--~d~~I--------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++..+ ..+++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~--------GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~ 97 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPV--------GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAK 97 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECS--------STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--------ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHH
Confidence 34667899999999999999864 444445678999999999999988654 33444
Q ss_pred ----ecCCcccccCC----CCHHHHhhh
Q 037554 68 ----ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ----AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 98 ~a~~~Gadavlv~~P~y~~~s~~~l~~~ 125 (301)
T 3m5v_A 98 FAKEHGADGILSVAPYYNKPTQQGLYEH 125 (301)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987543 355665544
No 28
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.16 E-value=0.72 Score=38.05 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=55.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+==+ ++.-..++.+|..+=+++++++..+ ..+++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 97 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGT--------TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQA 97 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc--------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHH
Confidence 3467889999999999999987444 3445678999999999999887643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 98 a~~~Gadavlv~~P~y~~~~~~~l~~~ 124 (297)
T 3flu_A 98 AEKAGADYTLSVVPYYNKPSQEGIYQH 124 (297)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999887443 355655544
No 29
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.03 E-value=0.83 Score=37.89 Aligned_cols=75 Identities=16% Similarity=0.241 Sum_probs=55.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~Gtt--------GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 105 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTT--------GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKA 105 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccc--------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHH
Confidence 34678899999999999999875544 345678999999999999987643 34444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 106 a~~~Gadavlv~~P~y~~~s~~~l~~~ 132 (304)
T 3l21_A 106 CAAEGAHGLLVVTPYYSKPPQRGLQAH 132 (304)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987543 356665444
No 30
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.95 E-value=0.78 Score=37.96 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtT--------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~ 102 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTT--------GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKK 102 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHH
Confidence 34567899999999999999865544 345678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 103 A~~~Gadavlv~~P~y~~~s~~~l~~~ 129 (301)
T 1xky_A 103 ATEVGVDAVMLVAPYYNKPSQEGMYQH 129 (301)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999887443 366665544
No 31
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.80 E-value=0.66 Score=39.25 Aligned_cols=75 Identities=23% Similarity=0.225 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-. +..-..++.+|..+=++.++++..+ ..+++
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~Gt--------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~ 121 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGS--------GGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQH 121 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESST--------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 3466889999999999999987444 3445678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 122 A~~~Gadavlv~~P~Y~~~s~~~l~~~ 148 (343)
T 2v9d_A 122 AQQAGADGIVVINPYYWKVSEANLIRY 148 (343)
T ss_dssp HHHHTCSEEEEECCSSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987443 366665544
No 32
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=91.69 E-value=0.66 Score=38.44 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+ ||.++.-..++.+|..+=++.++++..+ ..+++
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~ 106 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVL--------AGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEA 106 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHH
Confidence 3466889999999999999976 4454455678999999999999987643 33444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 107 A~~~Gadavlv~~P~y~~~~~~~l~~~ 133 (304)
T 3cpr_A 107 AASAGADGLLVVTPYYSKPSQEGLLAH 133 (304)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999887443 355665544
No 33
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=91.56 E-value=0.63 Score=38.31 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE-----------------
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL----------------- 67 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I----------------- 67 (173)
.....+.++.+++.|+.||.+ ||.++.-..++.+|..+=++.++++..+ ..+++
T Consensus 22 ~~~l~~lv~~li~~Gv~gl~v--------~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 93 (292)
T 3daq_A 22 LEALKAHVNFLLENNAQAIIV--------NGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEE--------CccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHH
Confidence 356788999999999999986 4444445678999999999999987643 45555
Q ss_pred --ecCCcccccCC----CCHHHHhhh
Q 037554 68 --ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 94 ~~~Gadavlv~~P~y~~~~~~~l~~~ 119 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTNQRGLVKH 119 (292)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999887443 355655544
No 34
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=91.48 E-value=0.66 Score=39.06 Aligned_cols=75 Identities=17% Similarity=0.104 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=|+.++++..+ ..+++
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtT--------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~ 124 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGST--------GIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKD 124 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 34668899999999999999875444 445678999999999999987653 33444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 125 A~~~Gadavlv~~P~Y~~~s~~~l~~~ 151 (332)
T 2r8w_A 125 AEAAGADALLLAPVSYTPLTQEEAYHH 151 (332)
T ss_dssp HHHHTCSEEEECCCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987443 366665544
No 35
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=91.42 E-value=0.69 Score=38.01 Aligned_cols=75 Identities=8% Similarity=0.060 Sum_probs=55.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gtt--------GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~ 91 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTT--------GEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKW 91 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGG--------GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHH
Confidence 34567899999999999999874443 345678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 92 a~~~Gadavlv~~P~y~~~s~~~l~~~ 118 (291)
T 3a5f_A 92 AESIGVDGLLVITPYYNKTTQKGLVKH 118 (291)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987443 366666654
No 36
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=90.90 E-value=0.36 Score=39.74 Aligned_cols=23 Identities=17% Similarity=0.254 Sum_probs=18.9
Q ss_pred CHHHHHhCCccEEEechHHHHHH
Q 037554 94 TPEELKAMGFHLTVHPLTALYAS 116 (173)
Q Consensus 94 ~~~eL~~lGv~~v~~~~~~~~aa 116 (173)
++..+.+.|++-+.+|.+++++-
T Consensus 218 dv~~l~~~G~~a~LVGealmr~~ 240 (258)
T 4a29_A 218 EIEELRKLGVNAFLISSSLMRNP 240 (258)
T ss_dssp HHHHHHHTTCCEEEECHHHHHCT
T ss_pred HHHHHHHCCCCEEEECHHHhCCC
Confidence 35778899999999999988753
No 37
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.85 E-value=0.32 Score=40.40 Aligned_cols=118 Identities=18% Similarity=0.171 Sum_probs=69.4
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------------
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------------- 67 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------------- 67 (173)
-+.+.++++|+..|-.-|...--..||.. ...++.+||+...++++++..+. ++|
T Consensus 40 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~d-t~~vtldem~~h~~aV~r~~~~~-~vvaD~pfgsY~s~~~a~~~a~rl~k 117 (275)
T 3vav_A 40 SFAALLDRANVDVQLIGDSLGNVLQGQTT-TLPVTLDDIAYHTACVARAQPRA-LIVADLPFGTYGTPADAFASAVKLMR 117 (275)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTCCSS-STTCCHHHHHHHHHHHHHTCCSS-EEEEECCTTSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHcCCCC-CCccCHHHHHHHHHHHHhcCCCC-CEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 35677899999999999987644455543 34689999999999998875422 344
Q ss_pred ecCCcccccCCC-CHHHHhhhh--cCCC-----CCHHHHHhCC-ccEEEechHHHHHHHHHHHHHHHHHHHcCCcc
Q 037554 68 ARADASFVEAPR-NDNEANWVW--GHTL-----HTPEELKAMG-FHLTVHPLTALYASARALVDVLKTLKESGTTR 134 (173)
Q Consensus 68 AGAD~ifv~g~~-~~e~i~~i~--g~p~-----~~~~eL~~lG-v~~v~~~~~~~~aa~~a~~~~~~~l~~~g~~~ 134 (173)
+||++|-+++-. ..+.++++. |-|. ++++....+| |+.+ +-.- +....+.+-++.+.+.|-..
T Consensus 118 aGa~aVklEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vq--grt~--~~a~~~i~rA~a~~eAGA~~ 189 (275)
T 3vav_A 118 AGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQ--GKTE--AGAAQLLRDARAVEEAGAQL 189 (275)
T ss_dssp TTCSEEEEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CC--CCSH--HHHHHHHHHHHHHHHHTCSE
T ss_pred cCCCEEEECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEE--cCCH--HHHHHHHHHHHHHHHcCCCE
Confidence 677777777642 234555552 3331 3343334343 4422 2211 12244445556666666543
No 38
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=90.82 E-value=0.76 Score=38.39 Aligned_cols=75 Identities=24% Similarity=0.266 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++..+ ..+++
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~--------GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 101 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVIL--------GTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHIND 101 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEES--------SGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC--------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHH
Confidence 34668899999999999999864 444445678999999999999987643 45555
Q ss_pred ---ecCCcccccCC------CCHHHHhhh
Q 037554 68 ---ARADASFVEAP------RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~------~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 102 a~~~Gadavlv~~P~y~~kp~~~~~l~~~ 130 (318)
T 3qfe_A 102 ASVAGANYVLVLPPAYFGKATTPPVIKSF 130 (318)
T ss_dssp HHHHTCSEEEECCCCC---CCCHHHHHHH
T ss_pred HHHcCCCEEEEeCCcccCCCCCHHHHHHH
Confidence 89998887444 255665544
No 39
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=90.77 E-value=0.83 Score=37.89 Aligned_cols=75 Identities=9% Similarity=0.153 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtT--------GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~ 102 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTT--------GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQ 102 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGG--------GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccc--------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHH
Confidence 34567899999999999999875544 345678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 103 A~~~Gadavlv~~P~y~~~s~~~l~~~ 129 (306)
T 1o5k_A 103 AEKLGANGVLVVTPYYNKPTQEGLYQH 129 (306)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987443 366665544
No 40
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=90.58 E-value=0.46 Score=42.90 Aligned_cols=69 Identities=19% Similarity=0.126 Sum_probs=56.9
Q ss_pred ecCCcccccCC-CCHHHHhhh---------------hcCCCC------------CH-HHHHhCCccEEEechHHHHHHHH
Q 037554 68 ARADASFVEAP-RNDNEANWV---------------WGHTLH------------TP-EELKAMGFHLTVHPLTALYASAR 118 (173)
Q Consensus 68 AGAD~ifv~g~-~~~e~i~~i---------------~g~p~~------------~~-~eL~~lGv~~v~~~~~~~~aa~~ 118 (173)
-+||+|+++.. .+.++++++ |.+|.+ ++ .+|.++||....+....+++...
T Consensus 387 p~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~~LaYN~SPSFnW~~~~~d~~~~~f~~~l~~~G~~~qfItLag~H~~~~ 466 (538)
T 1dqu_A 387 PFADLIWMESKLPDYKQAKEFADGVHAVWPEQKLAYNLSPSFNWKKAMPRDEQETYIKRLGALGYAWQFITLAGLHTTAL 466 (538)
T ss_dssp TSCSEEECCCSSCCHHHHHHHHHHHHHHCTTCEEEEECCSSSCGGGTSCHHHHHSHHHHHHHHTEEEEEETTHHHHHHHH
T ss_pred cccceEEeccCCCCHHHHHHHHHHHHHhCCCceEEecCCcchhhhhhCCHHHHHHHHHHHHhcCceEEEEehhhhhhhhH
Confidence 47999999875 678888887 115643 23 79999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcccc
Q 037554 119 ALVDVLKTLKESGTTRDH 136 (173)
Q Consensus 119 a~~~~~~~l~~~g~~~~~ 136 (173)
++.+.++.+.+.|+...+
T Consensus 467 ~~~~la~~~~~~gm~aYv 484 (538)
T 1dqu_A 467 ISDTFAKAYAKQGMRAYG 484 (538)
T ss_dssp HHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhCHHHHH
Confidence 999999999999976543
No 41
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.58 E-value=0.68 Score=38.16 Aligned_cols=75 Identities=16% Similarity=0.050 Sum_probs=54.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-+ ++.-..++.+|..+=++.++++..+ ..+++
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 93 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGT--------TGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAE 93 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST--------TTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHH
Confidence 3466889999999999999987444 3445678999999999999987643 34555
Q ss_pred ---ecCCcccccCC-----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP-----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~-----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 94 A~~~Gadavlv~~P~y~~~~s~~~l~~~ 121 (294)
T 3b4u_A 94 ALNAGARNILLAPPSYFKNVSDDGLFAW 121 (294)
T ss_dssp HHHTTCSEEEECCCCSSCSCCHHHHHHH
T ss_pred HHhcCCCEEEEcCCcCCCCCCHHHHHHH
Confidence 89999886433 255665544
No 42
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=90.54 E-value=0.29 Score=40.43 Aligned_cols=94 Identities=18% Similarity=0.157 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc-CCCCEEE----------ecCCcccc
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI-GDSDFVL----------ARADASFV 75 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~-~~~d~~I----------AGAD~ifv 75 (173)
.+..+..+.|+++||++|++=|... ++.| +. +....|+.+++.- --.||++ +|||+|.+
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd~~-----~f~G----s~-~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTDTP-----SFQG----AP-EFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILI 148 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCST-----TTCC----CH-HHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEecccc-----ccCC----CH-HHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEE
Confidence 4677889999999999999955321 1122 22 3444444332210 0124444 99999887
Q ss_pred cC-CCCHHHHhhh-----h-c-CC---CCCHHHHH---hCCccEEEech
Q 037554 76 EA-PRNDNEANWV-----W-G-HT---LHTPEELK---AMGFHLTVHPL 110 (173)
Q Consensus 76 ~g-~~~~e~i~~i-----~-g-~p---~~~~~eL~---~lGv~~v~~~~ 110 (173)
.. .-+.++++.+ . | .+ ..+.+|+. ++|++.|...+
T Consensus 149 i~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 149 IMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNN 197 (272)
T ss_dssp ETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEEC
T ss_pred cccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence 54 3466777777 1 4 22 35666664 68999988774
No 43
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.48 E-value=0.77 Score=38.31 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=56.1
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ ..-..++.+|..+=+++++++..+ ..+++
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtT--------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~ 114 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGST--------GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQF 114 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGG--------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 34678899999999999999865443 345678999999999999987643 45555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 115 A~~~Gadavlv~~P~y~~~s~~~l~~~ 141 (315)
T 3na8_A 115 AESLGAEAVMVLPISYWKLNEAEVFQH 141 (315)
T ss_dssp HHHTTCSEEEECCCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987543 366665555
No 44
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=90.45 E-value=1 Score=37.56 Aligned_cols=75 Identities=20% Similarity=0.164 Sum_probs=55.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|-.+=++.++++.. ...+++
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtT--------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~ 112 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTT--------GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKH 112 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTT--------TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccc--------cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHH
Confidence 34678899999999999999864443 44567899999999999998754 345555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 113 A~~~Gadavlv~~P~y~~~~~~~l~~~ 139 (315)
T 3si9_A 113 AEKAGADAVLVVTPYYNRPNQRGLYTH 139 (315)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987543 356665544
No 45
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=90.31 E-value=0.73 Score=37.88 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-+ ++.-..++.+|..+=+++++++..+ ..+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 90 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGT--------TGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRH 90 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSG--------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHH
Confidence 3456789999999999999986444 3445678999999999999987543 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 91 A~~~Gadavlv~~P~y~~~s~~~l~~~ 117 (292)
T 2vc6_A 91 AQNAGADGVLIVSPYYNKPTQEGIYQH 117 (292)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987444 366665543
No 46
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=90.24 E-value=1.5 Score=37.48 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=54.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+== .++.-..++.+|..+=+++++++..+ ..+++
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~G--------TTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~ 149 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGG--------TTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQ 149 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS--------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecc--------cccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHH
Confidence 346788999999999999998644 33445678999999999998887643 33444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++.+..+ .+.+++.+.
T Consensus 150 A~~~Gadavlvv~PyY~k~sq~gl~~h 176 (360)
T 4dpp_A 150 GFAVGMHAALHINPYYGKTSIEGLIAH 176 (360)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987543 366665444
No 47
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=89.51 E-value=0.85 Score=37.50 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=54.5
Q ss_pred ChHHHHHHHHHHHH-hCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE---------------
Q 037554 5 NALNVQRTVKDLVA-AGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL--------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~-aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I--------------- 67 (173)
|.....+.++.+++ .|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~Gtt--------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~ 93 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGST--------GENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGK 93 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGG--------GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccc--------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHH
Confidence 34667899999999 999999864443 345678999999999999987653 33444
Q ss_pred ----ecCCcccccCC----CCHHHHhhh
Q 037554 68 ----ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ----AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 94 ~a~~~Gadavlv~~P~y~~~~~~~l~~~ 121 (293)
T 1f6k_A 94 YATELGYDCLSAVTPFYYKFSFPEIKHY 121 (293)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999987443 355665544
No 48
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=89.44 E-value=1.9 Score=35.58 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=55.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtT--------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~ 101 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGST--------GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAAS 101 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeec--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHH
Confidence 34567899999999999999875544 345678999999999999987643 33444
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 102 A~~~Gadavlv~~P~y~~~s~~~l~~~ 128 (303)
T 2wkj_A 102 AKRYGFDAVSAVTPFYYPFSFEEHCDH 128 (303)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhCCCCEEEecCCCCCCCCHHHHHHH
Confidence 89999887443 366665544
No 49
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=89.37 E-value=0.67 Score=38.46 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=54.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+ ||.+..-..++.+|..+=++.++++..+ ..+++
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 104 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVV--------QGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVS 104 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEE--------SSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--------CccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHH
Confidence 3466788999999999999986 4444445678999999999999987643 23333
Q ss_pred ---ecCCcccccCC------CCHHHHhhh
Q 037554 68 ---ARADASFVEAP------RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~------~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 105 A~~~Gadavlv~~P~y~~~~~s~~~l~~~ 133 (307)
T 3s5o_A 105 MAQVGADAAMVVTPCYYRGRMSSAALIHH 133 (307)
T ss_dssp HHHTTCSEEEEECCCTTGGGCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCcCCCCCCHHHHHHH
Confidence 89999987332 256665544
No 50
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.27 E-value=0.72 Score=38.14 Aligned_cols=75 Identities=19% Similarity=0.135 Sum_probs=55.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++..+ ..+++
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~--------GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 94 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPL--------GSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKL 94 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTT--------SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--------ccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHH
Confidence 34678899999999999999754 443445678999999999999987543 45655
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 95 a~~~Gadavlv~~P~y~~~~~~~l~~~ 121 (300)
T 3eb2_A 95 YEKLGADGILAILEAYFPLKDAQIESY 121 (300)
T ss_dssp HHHHTCSEEEEEECCSSCCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987443 366665554
No 51
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.24 E-value=0.79 Score=38.10 Aligned_cols=75 Identities=12% Similarity=0.174 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++.. ...+++
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~--------GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 98 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCIL--------ANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLR 98 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEES--------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--------ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHH
Confidence 34678899999999999999864 33344567899999999999998764 345555
Q ss_pred ---ecCCcccccCC-------CCHHHHhhh
Q 037554 68 ---ARADASFVEAP-------RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~-------~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 99 A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~ 128 (309)
T 3fkr_A 99 AQQLGAAMVMAMPPYHGATFRVPEAQIFEF 128 (309)
T ss_dssp HHHTTCSEEEECCSCBTTTBCCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCccCCCCCHHHHHHH
Confidence 89999886432 256665554
No 52
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=89.22 E-value=0.7 Score=38.18 Aligned_cols=75 Identities=17% Similarity=0.126 Sum_probs=54.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~Gtt--------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 90 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTT--------GESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQH 90 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGG--------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHH
Confidence 34567899999999999999764443 345678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 91 A~~~Gadavlv~~P~y~~~s~~~l~~~ 117 (297)
T 2rfg_A 91 AQQAGADAVLCVAGYYNRPSQEGLYQH 117 (297)
T ss_dssp HHHHTCSEEEECCCTTTCCCHHHHHHH
T ss_pred HHhcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999887443 366665544
No 53
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=89.03 E-value=1.7 Score=36.12 Aligned_cols=75 Identities=12% Similarity=0.175 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=+++++++..+ ..+++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtT--------GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~ 97 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTT--------AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKE 97 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTT--------TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHH
Confidence 34668899999999999999875444 445678999999999999988643 45555
Q ss_pred ---ecC-CcccccCC----CCHHHHhhh
Q 037554 68 ---ARA-DASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGA-D~ifv~g~----~~~e~i~~i 87 (173)
+|| |++++..+ .+.+++.+.
T Consensus 98 A~~~Ga~davlv~~P~y~~~s~~~l~~~ 125 (311)
T 3h5d_A 98 VAEFGGFAAGLAIVPYYNKPSQEGMYQH 125 (311)
T ss_dssp HHHSCCCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCcEEEEcCCCCCCCCHHHHHHH
Confidence 797 98887443 355665544
No 54
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.99 E-value=1 Score=37.41 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=54.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=++.++++.....+++
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~--------GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A 98 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVL--------GILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLS 98 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEES--------TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEeC--------ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHH
Confidence 34678899999999999999864 44344567899999999999998872233444
Q ss_pred --ecCCcccccCC---CCHHHHhhh
Q 037554 68 --ARADASFVEAP---RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~---~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 99 ~~~Gadavlv~~P~~~~s~~~l~~~ 123 (313)
T 3dz1_A 99 MDAGAAGVMIAPPPSLRTDEQITTY 123 (313)
T ss_dssp HHHTCSEEEECCCTTCCSHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCHHHHHHH
Confidence 89999887433 355655544
No 55
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=88.53 E-value=2.1 Score=34.99 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=55.6
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+=++.++++..+ ..+++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gtt--------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 91 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTT--------GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKA 91 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTT--------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccc--------cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHH
Confidence 34678899999999999999875544 345678999999999999987643 44555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 92 a~~~Gadavlv~~P~y~~~~~~~l~~~ 118 (291)
T 3tak_A 92 AKDLGADAALLVTPYYNKPTQEGLYQH 118 (291)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHhcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999887443 355665544
No 56
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=88.52 E-value=3.7 Score=32.93 Aligned_cols=88 Identities=19% Similarity=0.114 Sum_probs=58.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++..+...++.+.+.|+..|.|--.+. +..+.+++|+. .. ++++| |
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~-------------~a~e~I~~l~~---~~--~~~~iGaGTVlt~~~a~~Ai~A 105 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSD-------------AAVEAIRLLRQ---AQ--PEMLIGAGTILNGEQALAAKEA 105 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTST-------------THHHHHHHHHH---HC--TTCEEEEECCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCC-------------CHHHHHHHHHH---hC--CCCEEeECCcCCHHHHHHHHHc
Confidence 467888999999999999999854431 12344444443 32 35555 9
Q ss_pred cCCcccccCCCCHHHHhhhh--cC---C-CCCHHH---HHhCCccEEEechH
Q 037554 69 RADASFVEAPRNDNEANWVW--GH---T-LHTPEE---LKAMGFHLTVHPLT 111 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i~--g~---p-~~~~~e---L~~lGv~~v~~~~~ 111 (173)
|||.|..|+ .+.+.++... +. | ..|+.| ..++|++.|-+-+.
T Consensus 106 GA~fIvsP~-~~~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa 156 (232)
T 4e38_A 106 GATFVVSPG-FNPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPA 156 (232)
T ss_dssp TCSEEECSS-CCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEECST
T ss_pred CCCEEEeCC-CCHHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEECcC
Confidence 999999887 4666666552 42 3 246655 45899998877553
No 57
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=88.47 E-value=1.1 Score=36.71 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc-CCCCEEE----------ecCCcccc
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI-GDSDFVL----------ARADASFV 75 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~-~~~d~~I----------AGAD~ifv 75 (173)
.+..+.++.|++.||++|++=+... ++.| --+.+..|+.+++.- ...||+| +|||+|.+
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~-----~f~G-----s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQR-----RFQG-----SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGG-----GHHH-----HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecChh-----hcCC-----CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEE
Confidence 4677889999999999999865421 0011 123444444332210 0124555 89999987
Q ss_pred c-CCCCHHHHhhh-----h-cC-C---CCCHHHH---HhCCccEEEech
Q 037554 76 E-APRNDNEANWV-----W-GH-T---LHTPEEL---KAMGFHLTVHPL 110 (173)
Q Consensus 76 ~-g~~~~e~i~~i-----~-g~-p---~~~~~eL---~~lGv~~v~~~~ 110 (173)
. ..-+.++++.+ . |. + ..+.+|+ .++|++.+.+.+
T Consensus 142 i~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 142 IVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNA 190 (272)
T ss_dssp EGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEES
T ss_pred ecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECC
Confidence 2 33456666665 1 42 1 2455555 468999988874
No 58
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=88.28 E-value=1.3 Score=36.75 Aligned_cols=75 Identities=17% Similarity=0.145 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=+++++++..+ ..+++
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~--------GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A 102 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPC--------GNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAA 102 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTT--------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC--------ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHH
Confidence 44678899999999999999753 444445678999999999999988653 34444
Q ss_pred --ecCCcccccCC----CCHHHHhhh
Q 037554 68 --ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 103 ~~~Gadavlv~~P~y~~~s~~~l~~~ 128 (316)
T 3e96_A 103 KAAGADAVMIHMPIHPYVTAGGVYAY 128 (316)
T ss_dssp HHHTCSEEEECCCCCSCCCHHHHHHH
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987433 266665544
No 59
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=88.26 E-value=1.5 Score=36.38 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=54.6
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+= |.++.-..++.+|..+=|+.++++..+ ..+++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~--------GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A 102 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPN--------GNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSA 102 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTT--------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--------cccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHH
Confidence 34668899999999999999754 443445678999999999999987643 33444
Q ss_pred --ecCCcccccCC----CCHHHHhhh
Q 037554 68 --ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 103 ~~~Gadavlv~~P~y~~~s~~~l~~~ 128 (314)
T 3d0c_A 103 IDSGADCVMIHQPVHPYITDAGAVEY 128 (314)
T ss_dssp HHTTCSEEEECCCCCSCCCHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHH
Confidence 89999887443 366665544
No 60
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=87.23 E-value=1.5 Score=35.96 Aligned_cols=45 Identities=11% Similarity=0.085 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
++..+.+.++.+.++||.-|+|-|.++ +..++++.+.|++.++..
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G-----------~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLGDTIG-----------VGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS-----------CCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCC-----------CcCHHHHHHHHHHHHHhC
Confidence 578899999999999999999999874 456788888888888764
No 61
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.14 E-value=2.1 Score=35.64 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=55.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I---------------- 67 (173)
|.....+.++.+++.|+.||.+=-++ +.-..++.+|..+-++.++++..+ ..+++
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtT--------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~ 113 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTT--------GESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEA 113 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGG--------GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccc--------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHH
Confidence 34677899999999999999875544 334678999999999999887643 45555
Q ss_pred ---ecCCcccccCC----CCHHHHhhh
Q 037554 68 ---ARADASFVEAP----RNDNEANWV 87 (173)
Q Consensus 68 ---AGAD~ifv~g~----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 114 A~~~Gadavlv~~P~y~~~s~~~l~~~ 140 (314)
T 3qze_A 114 AKSGGADACLLVTPYYNKPTQEGMYQH 140 (314)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 89999987543 356665544
No 62
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.12 E-value=1.7 Score=36.57 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=40.1
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
++..+.+.++.+.++|+.-|+|-|.++ +..+++..+.|++.++.-.+..+-+
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~i~~ 218 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLG-----------VLSPEETFQGVDSLIQKYPDIHFEF 218 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTC-----------CCCHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC-----------CcCHHHHHHHHHHHHHhcCCCeEEE
Confidence 356778899999999999999999874 4567888888888887653333333
No 63
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=86.88 E-value=1 Score=37.07 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=54.7
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------------
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------------- 67 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------------- 67 (173)
-+.+.++++|+..|-+-|+...-..||.+ ...++.+||+...++++++...+ +++
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~d-t~~vtldemi~h~~aV~r~~~~~-~vvaD~pfgsy~~~~~a~~~a~rl~k 105 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDS-TLPVTVADIAYHTAAVRRGAPNC-LLLADLPFMAYATPEQAFENAATVMR 105 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSS-STTCCHHHHHHHHHHHHHHCTTS-EEEEECCTTSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCC-CCCcCHHHHHHHHHHHHhhCCCC-cEEEECCCCCcCCHHHHHHHHHHHHH
Confidence 35678899999999999987644455543 35789999999999998876433 444
Q ss_pred ecCCcccccCCC-CHHHHhhh
Q 037554 68 ARADASFVEAPR-NDNEANWV 87 (173)
Q Consensus 68 AGAD~ifv~g~~-~~e~i~~i 87 (173)
+||++|-+++-. -.+.|+.+
T Consensus 106 aGa~aVklEgg~e~~~~I~al 126 (264)
T 1m3u_A 106 AGANMVKIEGGEWLVETVQML 126 (264)
T ss_dssp TTCSEEECCCSGGGHHHHHHH
T ss_pred cCCCEEEECCcHHHHHHHHHH
Confidence 899999998852 23444444
No 64
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=85.46 E-value=1.2 Score=36.95 Aligned_cols=75 Identities=9% Similarity=0.048 Sum_probs=54.0
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------------
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------------- 67 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------------- 67 (173)
-+.+.++++|+..|-.-|+...-..|+.+ ...++.+||+...++++++...+ +++
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~d-t~~vTldemi~h~~aV~r~~~~~-~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKS-TLPVSLRDMCYHTECVARGAKNA-MIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSS-STTCCHHHHHHHHHHHHHHCSSS-EEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCC-CCCCCHHHHHHHHHHHHhhCCCC-eEEEECCCCCccCCHHHHHHHHHHHH
Confidence 35678899999999998887544455543 35789999999999999886433 444
Q ss_pred -ecCCcccccCCC-CHHHHhhh
Q 037554 68 -ARADASFVEAPR-NDNEANWV 87 (173)
Q Consensus 68 -AGAD~ifv~g~~-~~e~i~~i 87 (173)
+||++|-+++-. -.+.|+.+
T Consensus 106 kaGa~aVklEdg~e~~~~I~al 127 (275)
T 1o66_A 106 AAGAHMVKLEGGVWMAETTEFL 127 (275)
T ss_dssp HTTCSEEEEECSGGGHHHHHHH
T ss_pred HcCCcEEEECCcHHHHHHHHHH
Confidence 789999888752 23444444
No 65
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=84.58 E-value=2.4 Score=34.38 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=43.8
Q ss_pred HHHHHHHHhCceEEE--eccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCCcc
Q 037554 11 RTVKDLVAAGAAGCF--LEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARADAS 73 (173)
Q Consensus 11 rtv~~~~~aGvagi~--iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD~i 73 (173)
+.++....+|+..|. +||.+.| .+.....|+++... +...+| +|+|+|
T Consensus 28 ~~~e~a~~~g~D~vilDlEhav~~-------------~~k~~~~l~a~~~~--~~~~~VRVn~~~~~di~~~ld~G~~gI 92 (261)
T 3qz6_A 28 DIVRIYAEAGLDYFIVDCEHAAYT-------------FREINHLVSVAKNA--GVSVLVRIPQVDRAHVQRLLDIGAEGF 92 (261)
T ss_dssp THHHHHHHTTCSEEEEESSSSCCC-------------HHHHHHHHHHHHHH--TCEEEEECSSCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHhcCCcCEEEEeccCCCCC-------------HHHHHHHHHHHhhc--CCeEEEEeCCCCHHHHHHHHhcCCCEE
Confidence 345666778887776 5776643 45566666665433 234455 899999
Q ss_pred cccCCCCHHHHhhh
Q 037554 74 FVEAPRNDNEANWV 87 (173)
Q Consensus 74 fv~g~~~~e~i~~i 87 (173)
++|-+++.++++++
T Consensus 93 ~lP~v~saed~~~~ 106 (261)
T 3qz6_A 93 MIPGVQSAETMRET 106 (261)
T ss_dssp EETTCCSHHHHHHH
T ss_pred EECCcCCHHHHHHH
Confidence 99999999998877
No 66
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=84.38 E-value=1.6 Score=36.22 Aligned_cols=45 Identities=13% Similarity=0.030 Sum_probs=37.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
++..+.+.++.+.++|+.-|+|-|.++ +..+++..+.|++.++.-
T Consensus 155 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G-----------~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 155 PIEQVIRLSEALFEFGISELSLGDTIG-----------AANPAQVETVLEALLARF 199 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECSSC-----------CCCHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCC-----------CcCHHHHHHHHHHHHHhC
Confidence 467888999999999999999999874 456788888888887654
No 67
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=84.23 E-value=12 Score=29.66 Aligned_cols=88 Identities=17% Similarity=0.159 Sum_probs=59.1
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++.++...++.+.+.|+..|-|-=.+ | ...+-|++.++.- ++++| |
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~t-~---------------~a~~~I~~l~~~~--p~~~IGAGTVlt~~~a~~ai~A 84 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLRT-E---------------AGLAAISAIKKAV--PEAIVGAGTVCTADDFQKAIDA 84 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETTS-T---------------THHHHHHHHHHHC--TTSEEEEECCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC-c---------------cHHHHHHHHHHHC--CCCeEeeccccCHHHHHHHHHc
Confidence 46788899999999999999883221 1 2334445444443 56666 9
Q ss_pred cCCcccccCCCCHHHHhhh--------h-c--CC-CCCHHH---HHhCCccEEEechH
Q 037554 69 RADASFVEAPRNDNEANWV--------W-G--HT-LHTPEE---LKAMGFHLTVHPLT 111 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i--------~-g--~p-~~~~~e---L~~lGv~~v~~~~~ 111 (173)
|||.|..|+. +++.++.. | | .| ..|++| ..++|++.+-+-+.
T Consensus 85 GA~fivsP~~-~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa 141 (217)
T 3lab_A 85 GAQFIVSPGL-TPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPA 141 (217)
T ss_dssp TCSEEEESSC-CHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTT
T ss_pred CCCEEEeCCC-cHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECcc
Confidence 9999999984 67666655 2 2 23 256554 56789999877553
No 68
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=84.16 E-value=2.6 Score=33.54 Aligned_cols=74 Identities=15% Similarity=0.058 Sum_probs=46.1
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcc-----------cCHHHHHHHHHHHHHhcCCCCEEE---
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQI-----------IPAEEHAAKIASARDAIGDSDFVL--- 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l-----------~~~ee~~~kI~Aa~~a~~~~d~~I--- 67 (173)
|+-+..+..+.++.++++||..|+|-.-.. -....|+.+ +++++..+-|+++++. .+..+++
T Consensus 27 g~~~~~~~~~~~~~l~~~Gad~ielg~p~~---dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~ 102 (262)
T 1rd5_A 27 GDPDLATTAEALRLLDGCGADVIELGVPCS---DPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSY 102 (262)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSSEEEECCCS---CCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCCC---CcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEec
Confidence 445557888899999999999999953221 011122111 2556666666766654 3333443
Q ss_pred --------------ecCCcccccCCC
Q 037554 68 --------------ARADASFVEAPR 79 (173)
Q Consensus 68 --------------AGAD~ifv~g~~ 79 (173)
+|||+|.++...
T Consensus 103 ~~~~~~~~~~~a~~aGadgv~v~d~~ 128 (262)
T 1rd5_A 103 YKPIMFRSLAKMKEAGVHGLIVPDLP 128 (262)
T ss_dssp SHHHHSCCTHHHHHTTCCEEECTTCB
T ss_pred CcHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 899988887643
No 69
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=84.05 E-value=2.2 Score=36.06 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=50.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------- 67 (173)
|.....+.++.+++.|+.||.+ ||.++.-..++.+|..+=++. .+.....+++
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v--------~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A 114 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVY--------CGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHA 114 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE--------SSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--------CccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 3466889999999999999976 444444567899998887776 3333345555
Q ss_pred --ecCCcccccCC-----CCHHHHhhh
Q 037554 68 --ARADASFVEAP-----RNDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~-----~~~e~i~~i 87 (173)
+|||++++..+ .+.+++.+.
T Consensus 115 ~~~Gadavlv~~P~y~~~~s~~~l~~~ 141 (344)
T 2hmc_A 115 QKVGAKGLMVIPRVLSRGSVIAAQKAH 141 (344)
T ss_dssp HHHTCSEEEECCCCSSSTTCHHHHHHH
T ss_pred HhcCCCEEEECCCccCCCCCHHHHHHH
Confidence 89999886433 255554433
No 70
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=83.76 E-value=0.44 Score=37.52 Aligned_cols=96 Identities=15% Similarity=0.101 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEec--cCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE------------ecC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE--DQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------ARA 70 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE--Dq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------AGA 70 (173)
+..+..+.++.++++|+.-||+. |..+.. ... ..+ +.+.+|+...+..-+.+|+| +||
T Consensus 17 d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~------~~~-~~~-~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~aga 88 (228)
T 1h1y_A 17 DFANLAAEADRMVRLGADWLHMDIMDGHFVP------NLT-IGA-PVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGA 88 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS------CBC-BCH-HHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEecCCcCc------chh-hCH-HHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCC
Confidence 45678899999999999988887 433211 111 122 56666654321111223444 899
Q ss_pred CcccccCCCCHHH----Hhhhh------c---CCCCCH---HHHHhC--CccEEEe
Q 037554 71 DASFVEAPRNDNE----ANWVW------G---HTLHTP---EELKAM--GFHLTVH 108 (173)
Q Consensus 71 D~ifv~g~~~~e~----i~~i~------g---~p~~~~---~eL~~l--Gv~~v~~ 108 (173)
|+|-+|+..+.+. ++++. + .|..+. +.+.++ ++..|.+
T Consensus 89 d~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 89 SGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLV 144 (228)
T ss_dssp SEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEE
T ss_pred CEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEE
Confidence 9998888654333 55541 2 343333 444444 8888877
No 71
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=83.68 E-value=2.8 Score=35.85 Aligned_cols=46 Identities=9% Similarity=-0.064 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
++.-+.+.++.++++|+.-|+|-|.++ +..|.++.+.|++.++.-.
T Consensus 155 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G-----------~~~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 155 EIDFLAEICGAVIEAGATTINIPDTVG-----------YSIPYKTEEFFRELIAKTP 200 (370)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECSSS-----------CCCHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCccC-----------CcCHHHHHHHHHHHHHhCC
Confidence 567788999999999999999999885 4567888888988887643
No 72
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=83.37 E-value=2.3 Score=35.61 Aligned_cols=42 Identities=10% Similarity=0.076 Sum_probs=33.4
Q ss_pred ecCCcccccCCCCHHHHhhh----------h--c-CCCCCHHHHHhCCccEEEech
Q 037554 68 ARADASFVEAPRNDNEANWV----------W--G-HTLHTPEELKAMGFHLTVHPL 110 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i----------~--g-~p~~~~~eL~~lGv~~v~~~~ 110 (173)
+|||.|...-. +++++++. + | .-.-++.++++.||+.+|.|.
T Consensus 226 aGaDiImLDn~-s~~~l~~av~~~~~~v~leaSGGIt~~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 226 NNVDMILLDNM-SISEIKKAVDIVNGKSVLEVSGCVNIRNVRNIALTGVDYISIGC 280 (300)
T ss_dssp TTCSEEEEESC-CHHHHHHHHHHHTTSSEEEEESSCCTTTHHHHHTTTCSEEECGG
T ss_pred cCCCEEEECCC-CHHHHHHHHHhhcCceEEEEECCCCHHHHHHHHHcCCCEEEeCc
Confidence 99999999875 67777766 1 2 234688999999999999985
No 73
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.27 E-value=3.1 Score=34.02 Aligned_cols=104 Identities=12% Similarity=0.012 Sum_probs=62.1
Q ss_pred HHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------ecCCcccccCC
Q 037554 12 TVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL-------------ARADASFVEAP 78 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I-------------AGAD~ifv~g~ 78 (173)
.|.+...+||.||+|=+... +.++..+-++.++. -+.++++ +|||.|-+.+.
T Consensus 127 qv~~A~~~GAD~VlLi~a~l-------------~~~~l~~l~~~a~~--lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r 191 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAAL-------------EQSVLVSMLDRTES--LGMTALVEVHTEQEADRALKAGAKVIGVNAR 191 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGS-------------CHHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCSEEEEESB
T ss_pred HHHHHHHcCCCEEEEecccC-------------CHHHHHHHHHHHHH--CCCcEEEEcCCHHHHHHHHHCCCCEEEECCC
Confidence 35666789999999965432 23333333343333 1344444 78888776542
Q ss_pred ------CCHHHHhhhh-----cCC------CC---CHHHHHhCCccEEEechHHHHHHHHHHHHHHHHHHHcCC
Q 037554 79 ------RNDNEANWVW-----GHT------LH---TPEELKAMGFHLTVHPLTALYASARALVDVLKTLKESGT 132 (173)
Q Consensus 79 ------~~~e~i~~i~-----g~p------~~---~~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~~~g~ 132 (173)
.+.+.+.++- +.| .. ++.++.++|+.-|..|..++++. -...+++.+.+.+.
T Consensus 192 ~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~--dp~~~~~~l~~~~~ 263 (272)
T 3qja_A 192 DLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSG--DPRAAVADLVTAGT 263 (272)
T ss_dssp CTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCS--CHHHHHHHHHTTTT
T ss_pred cccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCC--CHHHHHHHHHhhhc
Confidence 1234444441 122 12 35677889999999999887764 35566777776654
No 74
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=83.24 E-value=2.9 Score=34.98 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
++.-+.+.++.+.++|+.-|+|-|.++ +..+.++.+.|++.++.-.
T Consensus 149 ~~~~~~~~~~~~~~~G~~~i~l~DT~G-----------~~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 149 DQAFLARMVEAVIEAGADVVNIPDTTG-----------YMLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCBSSS-----------CCCHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHhcCCCEEEecCccC-----------CcCHHHHHHHHHHHHHhCC
Confidence 467788999999999999999999874 4567888888888887654
No 75
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.22 E-value=2.6 Score=34.72 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
++..+.+.++.+.++|+.-|+|-|.++ +..+++..+.|++.++.-.
T Consensus 148 ~~~~~~~~~~~~~~~G~~~i~l~DT~G-----------~~~P~~v~~lv~~l~~~~~ 193 (293)
T 3ewb_X 148 DRAFLIEAVQTAIDAGATVINIPDTVG-----------YTNPTEFGQLFQDLRREIK 193 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSS-----------CCCHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCC-----------CCCHHHHHHHHHHHHHhcC
Confidence 567788999999999999999999874 4567888888888877643
No 76
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=83.05 E-value=15 Score=29.70 Aligned_cols=67 Identities=10% Similarity=0.016 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHHhCce-EEEeccCCCCccCCCCCC-Cccc-CHHHHHHHHHHHHHhcCCCCEEE--------------
Q 037554 5 NALNVQRTVKDLVAAGAA-GCFLEDQSWPKKCGHMHG-KQII-PAEEHAAKIASARDAIGDSDFVL-------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGva-gi~iEDq~~pKrcg~~~g-~~l~-~~ee~~~kI~Aa~~a~~~~d~~I-------------- 67 (173)
++.+..+.++++.++|+. +|.|- . .|.+..+ ..+- +++...+-|++++++. +..+++
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein--~---~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~ 177 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELN--L---SCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIM 177 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEE--S---CCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEe--c---cCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHH
Confidence 467888999999999988 77663 1 2444322 2332 6666666666666553 333444
Q ss_pred ------ecCCcccccC
Q 037554 68 ------ARADASFVEA 77 (173)
Q Consensus 68 ------AGAD~ifv~g 77 (173)
+|+|+|.+++
T Consensus 178 a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 178 AEILNQFPLTYVNSVN 193 (311)
T ss_dssp HHHHTTSCCCEEEECC
T ss_pred HHHHHHcCCcEEEecC
Confidence 7999987754
No 77
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=82.65 E-value=13 Score=27.89 Aligned_cols=22 Identities=5% Similarity=0.012 Sum_probs=19.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEe
Q 037554 5 NALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~i 26 (173)
++.++.+.++.+.+.|+..|.+
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev 41 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEI 41 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEE
Confidence 4677889999999999999976
No 78
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=82.59 E-value=3.4 Score=36.48 Aligned_cols=51 Identities=16% Similarity=0.227 Sum_probs=40.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
++..+.+.+++++++||.-|+|-|..+ +..+.++.+.|++.++.- +..+-+
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G-----------~~~P~~v~~lv~~l~~~~-~~~i~~ 206 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAG-----------ILTPYAAEELVSTLKKQV-DVELHL 206 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS-----------CCCHHHHHHHHHHHHHHC-CSCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC-----------CcCHHHHHHHHHHHHHhc-CCeEEE
Confidence 567788999999999999999999875 456788888888888764 334444
No 79
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=82.38 E-value=2.4 Score=34.89 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=35.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
++..+.+.++.+.++|+.-|+|-|..+ +..+++..+.|++.++.-
T Consensus 157 ~~~~~~~~~~~~~~~G~d~i~l~DT~G-----------~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 157 DPRQVAWVARELQQMGCYEVSLGDTIG-----------VGTAGATRRLIEAVASEV 201 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESSS-----------CCCHHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCC-----------CcCHHHHHHHHHHHHHhC
Confidence 567888899999999999999999764 345778888888877653
No 80
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=81.71 E-value=5.7 Score=31.81 Aligned_cols=96 Identities=20% Similarity=0.225 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCc--cCCCCCCCcccCHHHHH---HHHHHHHHhcCCCCEEE---------ecCCcc
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPK--KCGHMHGKQIIPAEEHA---AKIASARDAIGDSDFVL---------ARADAS 73 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pK--rcg~~~g~~l~~~ee~~---~kI~Aa~~a~~~~d~~I---------AGAD~i 73 (173)
+....+++..+.|+.-|+|-++..+. ..| -.+..++. .+|+..++.. +..|+| +|||+|
T Consensus 44 ~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~------~l~~~~~~~~a~~l~~l~~~~-~~~liInd~~~lA~~~gAdGV 116 (243)
T 3o63_A 44 DLAQFAEAALAGGVDIIQLRDKGSPGELRFG------PLQARDELAACEILADAAHRY-GALFAVNDRADIARAAGADVL 116 (243)
T ss_dssp CHHHHHHHHHHTTCSEEEECCTTCHHHHHHC------SCCHHHHHHHHHHHHHHHHHT-TCEEEEESCHHHHHHHTCSEE
T ss_pred hHHHHHHHHHHCCCCEEEEccCCCCcccccc------CCCHHHHHHHHHHHHHHHHhh-CCEEEEeCHHHHHHHhCCCEE
Confidence 47788889999999999998865210 000 02334444 4455444432 355777 899998
Q ss_pred cccCC-CCHHHHhhhh------cCCCCCHHHHH---hCCccEEEech
Q 037554 74 FVEAP-RNDNEANWVW------GHTLHTPEELK---AMGFHLTVHPL 110 (173)
Q Consensus 74 fv~g~-~~~e~i~~i~------g~p~~~~~eL~---~lGv~~v~~~~ 110 (173)
-+..- -+..+++++- |....|.+|+. +.|++.|.+++
T Consensus 117 HLg~~dl~~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgp 163 (243)
T 3o63_A 117 HLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGP 163 (243)
T ss_dssp EECTTSSCHHHHHHHSCTTCEEEEEECSHHHHHHHHHSSCSEEEECC
T ss_pred EecCCcCCHHHHHHhhCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcC
Confidence 87542 2467777761 32335666654 68999999875
No 81
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.71 E-value=2.6 Score=34.31 Aligned_cols=52 Identities=13% Similarity=0.041 Sum_probs=39.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
++..+.+.++.+.++||..|+|-|..+ +..+++..+.|++.++...+..+.+
T Consensus 153 ~~~~~~~~~~~~~~~G~d~i~l~Dt~G-----------~~~P~~~~~lv~~l~~~~~~~~l~~ 204 (295)
T 1ydn_A 153 TPQAVASVTEQLFSLGCHEVSLGDTIG-----------RGTPDTVAAMLDAVLAIAPAHSLAG 204 (295)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEETTS-----------CCCHHHHHHHHHHHHTTSCGGGEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCCCC-----------CcCHHHHHHHHHHHHHhCCCCeEEE
Confidence 678888999999999999999999753 3567888888888876543223444
No 82
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=81.21 E-value=4.1 Score=37.93 Aligned_cols=45 Identities=18% Similarity=0.199 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
++.-+.+.++.++++||.-|+|=|.++ +..+.++.+.|++.++.-
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G-----------~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAG-----------LLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTS-----------CCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCC-----------CcCHHHHHHHHHHHHHhC
Confidence 456788999999999999999999874 566788999999888765
No 83
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=81.07 E-value=4.9 Score=36.17 Aligned_cols=46 Identities=17% Similarity=0.239 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
++.-+.+.++.++++|+.-|+|-|.++ +..+.++.+.|++.++.-.
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p 218 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAA-----------LLKPQPAYDIIKAIKDTYG 218 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTC-----------CCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCC-----------CcCHHHHHHHHHHHHHhcC
Confidence 567788999999999999999999874 4567888888888887653
No 84
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=80.62 E-value=10 Score=30.42 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=21.6
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEe
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~i 26 (173)
||-+.....+.++.+.++||.+|.|
T Consensus 26 g~p~~~~~~~~~~~l~~~G~D~IEl 50 (262)
T 2ekc_A 26 GYPDYETSLKAFKEVLKNGTDILEI 50 (262)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCChHHHHHHHHHHHHcCCCEEEE
Confidence 5666677888899999999999998
No 85
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.44 E-value=3.2 Score=32.99 Aligned_cols=22 Identities=23% Similarity=0.098 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHhCceEEEec
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLE 27 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iE 27 (173)
+..+.+.++.++++|+.||.+.
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~~ 56 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRIE 56 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE
T ss_pred cchHHHHHHHHHHCCCeEEEEC
Confidence 5678999999999999999874
No 86
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=79.82 E-value=11 Score=30.53 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhCceEEEeccCC
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~ 30 (173)
.+.+.++++.++||.|+.|=|-.
T Consensus 111 g~e~f~~~~~~aGvdgvii~Dlp 133 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIADVP 133 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSC
T ss_pred hHHHHHHHHHHcCCCEEEeCCCC
Confidence 35788999999999999998854
No 87
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=79.64 E-value=6.2 Score=33.15 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=36.4
Q ss_pred HHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 12 TVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
+.+.++++|..+|-+-|. +.--..|+.. ..+++.+||+..+++++++..
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~lG~pD-~~~vt~~em~~~~~~I~r~~~ 100 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAMLGLPD-FGLLTTTEVVEATRRITAAAP 100 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHHCCCS-SSCSCHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhcCCCC-CCCCCHHHHHHHHHHHHhhcc
Confidence 456778899999999994 4322234432 368999999999999998863
No 88
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=79.44 E-value=8.2 Score=31.96 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=47.4
Q ss_pred HHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------------e
Q 037554 12 TVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------------A 68 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------------A 68 (173)
+.+.++++|..+|-+-|. +.--..|+.. ..+++.+||+..+++++++...| +++ +
T Consensus 29 sA~~~~~aG~~ai~vs~~~~a~~~~G~pD-~~~vt~~em~~~~~~I~~~~~~P-viaD~d~Gyg~~~~~~~~~v~~l~~a 106 (295)
T 1xg4_A 29 HALLAQRAGYQAIYLSGGGVAAGSLGLPD-LGISTLDDVLTDIRRITDVCSLP-LLVDADIGFGSSAFNVARTVKSMIKA 106 (295)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHTTTCCCS-SSCSCHHHHHHHHHHHHHHCCSC-EEEECTTCSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECchHhhhhhcCCCC-CCCCCHHHHHHHHHHHHhhCCCC-EEecCCcccCCCHHHHHHHHHHHHHc
Confidence 456778899999999997 3211234432 35899999999999999886544 444 7
Q ss_pred cCCcccccCC
Q 037554 69 RADASFVEAP 78 (173)
Q Consensus 69 GAD~ifv~g~ 78 (173)
||++|-+++-
T Consensus 107 Ga~gv~iEd~ 116 (295)
T 1xg4_A 107 GAAGLHIEDQ 116 (295)
T ss_dssp TCSEEEEECB
T ss_pred CCeEEEECCC
Confidence 8888887653
No 89
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=79.39 E-value=5.6 Score=30.04 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCC
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAP 78 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~ 78 (173)
+..+.++.+.++|+..|++.+.... .-...+.+++|+..... .+..+++ +|||+|-++..
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~----------~~~~~~~~~~l~~~~~~-~~v~v~v~~~~~~a~~~gad~v~l~~~ 95 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAP----------TREMYEIGKTLRQLTRE-YDALFFVDDRVDVALAVDADGVQLGPE 95 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCC----------HHHHHHHHHHHHHHHHH-TTCEEEEESCHHHHHHHTCSEEEECTT
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCC----------HHHHHHHHHHHHHHHHH-cCCeEEEcChHHHHHHcCCCEEEECCc
Confidence 5667899999999999999974311 01113344445443332 2345666 89999988653
Q ss_pred -CCHHHHhhhh-----cCCCCCH---HHHHhCCccEEEec
Q 037554 79 -RNDNEANWVW-----GHTLHTP---EELKAMGFHLTVHP 109 (173)
Q Consensus 79 -~~~e~i~~i~-----g~p~~~~---~eL~~lGv~~v~~~ 109 (173)
.+.++++++. +....|. .+..+.|++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~t~~e~~~~~~~g~d~i~~~ 135 (215)
T 1xi3_A 96 DMPIEVAKEIAPNLIIGASVYSLEEALEAEKKGADYLGAG 135 (215)
T ss_dssp SCCHHHHHHHCTTSEEEEEESSHHHHHHHHHHTCSEEEEE
T ss_pred cCCHHHHHHhCCCCEEEEecCCHHHHHHHHhcCCCEEEEc
Confidence 3566666651 2111233 44567899999863
No 90
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=79.03 E-value=3.9 Score=32.94 Aligned_cols=25 Identities=24% Similarity=0.304 Sum_probs=21.4
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEe
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~i 26 (173)
|+-+..+..+.++.++++||.+|+|
T Consensus 26 gdp~~~~~~~~~~~l~~~GaD~iei 50 (268)
T 1qop_A 26 GDPGIEQSLKIIDTLIDAGADALEL 50 (268)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 4445578889999999999999999
No 91
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=78.11 E-value=2.2 Score=34.42 Aligned_cols=90 Identities=16% Similarity=0.150 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCC----CEEE----------ecCCc
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDS----DFVL----------ARADA 72 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~----d~~I----------AGAD~ 72 (173)
.+..+.++.|+++||++|++-|... +..| + -+....|+. +-.-| ||++ +|||+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~-----~f~G----~-~~~l~~i~~---~v~lPvl~kdfI~d~~qi~~a~~~GAD~ 131 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPH-----RFGG----S-LLDLKRVRE---AVDLPLLRKDFVVDPFMLEEARAFGASA 131 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCS-----SSCC----C-HHHHHHHHH---HCCSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHcCCCEEEEecchh-----hhcc----C-HHHHHHHHH---hcCCCEEECCcCCCHHHHHHHHHcCCCE
Confidence 4567889999999999999944321 1112 1 234444443 32222 5555 89999
Q ss_pred ccccCC-CCHHHHhhh-----h-c-CC---CCCHHH---HHhCCccEEEech
Q 037554 73 SFVEAP-RNDNEANWV-----W-G-HT---LHTPEE---LKAMGFHLTVHPL 110 (173)
Q Consensus 73 ifv~g~-~~~e~i~~i-----~-g-~p---~~~~~e---L~~lGv~~v~~~~ 110 (173)
|.+... -+ ++++++ . | .+ ..+.+| ..++|.+.+-+.+
T Consensus 132 VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~ 182 (254)
T 1vc4_A 132 ALLIVALLG-ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINN 182 (254)
T ss_dssp EEEEHHHHG-GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEES
T ss_pred EEECccchH-HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEcc
Confidence 987432 13 556655 1 4 22 345544 4567777776654
No 92
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=77.73 E-value=20 Score=26.95 Aligned_cols=23 Identities=13% Similarity=0.119 Sum_probs=19.7
Q ss_pred CCHHHHHhCCccEEEechHHHHH
Q 037554 93 HTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 93 ~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
-++.++.+.|++.++.|...+++
T Consensus 171 ~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 171 QTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp TTHHHHHTTCCSEEEECHHHHTC
T ss_pred HHHHHHHHcCCCEEEECHHHcCC
Confidence 57788999999999999888754
No 93
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=77.67 E-value=4.5 Score=35.31 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=36.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
++..+.+.++.+.++|+.-|+|-|.++ +..+.++.+.|++.++.
T Consensus 178 d~~~~~~v~~~~~~~Ga~~i~l~DTvG-----------~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 178 DLVDLLSLYKAVDKIGVNRVGIADTVG-----------CATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEEETTS-----------CCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCccccCCccC-----------cCCHHHHHHHHHHHHhh
Confidence 567788999999999999999999884 45667788888877764
No 94
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=77.59 E-value=1.5 Score=36.38 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=53.0
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------------
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------------- 67 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------------- 67 (173)
-+.+.++++|+..|-.-|+...-..||.. ...++.+||+...++++++...+ +++
T Consensus 45 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~d-t~~vTldemi~h~~aV~r~~~~~-~vvaD~pfgsy~~s~~~a~~na~rl~ 122 (281)
T 1oy0_A 45 STARIFDEAGIPVLLVGDSAANVVYGYDT-TVPISIDELIPLVRGVVRGAPHA-LVVADLPFGSYEAGPTAALAAATRFL 122 (281)
T ss_dssp HHHHHHHTTTCCEEEECTTHHHHTTCCSS-SSSCCGGGTHHHHHHHHHHCTTS-EEEEECCTTSSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCC-CCCCCHHHHHHHHHHHHhcCCCC-eEEEECCCCcccCCHHHHHHHHHHHH
Confidence 35677889999999998887644455543 35689999999999998876433 444
Q ss_pred --ecCCcccccCCC-CHHHHhhh
Q 037554 68 --ARADASFVEAPR-NDNEANWV 87 (173)
Q Consensus 68 --AGAD~ifv~g~~-~~e~i~~i 87 (173)
+||++|-+++-. -.+.|+.+
T Consensus 123 ~eaGa~aVklEdg~e~~~~I~al 145 (281)
T 1oy0_A 123 KDGGAHAVKLEGGERVAEQIACL 145 (281)
T ss_dssp HTTCCSEEEEEBSGGGHHHHHHH
T ss_pred HHhCCeEEEECCcHHHHHHHHHH
Confidence 788888887742 23444444
No 95
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=76.96 E-value=4.8 Score=33.41 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=34.1
Q ss_pred ecCCcccccCCCCHHHHhhh----------h--c-CCCCCHHHHHhCCccEEEechHH
Q 037554 68 ARADASFVEAPRNDNEANWV----------W--G-HTLHTPEELKAMGFHLTVHPLTA 112 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i----------~--g-~p~~~~~eL~~lGv~~v~~~~~~ 112 (173)
+|||.|...-. ++++++++ + | --.-++.++++.|++.+|.|...
T Consensus 217 aGaD~I~LDn~-~~~~l~~av~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 217 AKADIVMLDNF-SGEDIDIAVSIARGKVALEVSGNIDRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp TTCSEEEEESC-CHHHHHHHHHHHTTTCEEEEESSCCTTTHHHHHTTTCSEEECSHHH
T ss_pred cCCCEEEEcCC-CHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHcCCCEEEEChhh
Confidence 99999999774 67777766 1 2 22468899999999999998543
No 96
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=76.04 E-value=7.9 Score=31.85 Aligned_cols=77 Identities=18% Similarity=0.115 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ec
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------AR 69 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AG 69 (173)
++..+.+.++++++.||.=|-|-=+.. .+|-..+|.+|-.+|+.-+.++....++.| +|
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeST------RPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT~~~~Va~~al~aG 101 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVST------RPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLG 101 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCC------STTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccC------CCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHhc
Confidence 456677888999999999887754332 135567899999999988888866677777 99
Q ss_pred CCccc-cc-CCCCHHHHhhh
Q 037554 70 ADASF-VE-APRNDNEANWV 87 (173)
Q Consensus 70 AD~if-v~-g~~~~e~i~~i 87 (173)
||+|= |- +..|++-+..+
T Consensus 102 a~iINDVs~g~~d~~m~~~v 121 (270)
T 4hb7_A 102 VDMINDQWAGLYDHRMFQIV 121 (270)
T ss_dssp CCEEEETTTTSSCTHHHHHH
T ss_pred cceeccccccccchhHHHHH
Confidence 99875 43 34566665555
No 97
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=75.69 E-value=9.4 Score=28.99 Aligned_cols=86 Identities=12% Similarity=0.014 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++.+..+.++.+.+.|+..|++.|...+ ..+.|+..++.. +.+|+| +
T Consensus 17 d~~~~~~~~~~~~~~G~~~i~l~~~~~~----------------~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~ 79 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLNSPQ----------------WEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARM 79 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETTSTT----------------HHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChh----------------HHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHc
Confidence 5678889999999999999999876411 123344333322 234555 8
Q ss_pred cCCcccccCCCCHHHHhhhh--cC---C-CCCHH---HHHhCCccEEEe
Q 037554 69 RADASFVEAPRNDNEANWVW--GH---T-LHTPE---ELKAMGFHLTVH 108 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i~--g~---p-~~~~~---eL~~lGv~~v~~ 108 (173)
|||.|.++. .+.+.++... |. + ..|.+ +..++|++.|.+
T Consensus 80 Gad~V~~~~-~~~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 80 GCQLIVTPN-IHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKI 127 (212)
T ss_dssp TCCEEECSS-CCHHHHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEeCC-CCHHHHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEE
Confidence 999997654 4555554442 31 1 23443 446789999974
No 98
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=75.21 E-value=23 Score=26.43 Aligned_cols=23 Identities=9% Similarity=-0.044 Sum_probs=19.5
Q ss_pred CCCHHHHHhCCccEEEechHHHH
Q 037554 92 LHTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 92 ~~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
.-++.++.+.|+..|..+...+.
T Consensus 173 ~~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 173 KDNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp TTTHHHHHTTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEhHHHhC
Confidence 45788889999999999988765
No 99
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=74.75 E-value=6.1 Score=32.18 Aligned_cols=142 Identities=18% Similarity=0.102 Sum_probs=71.7
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcc-----------cCHHHHHHHHHHHHHhcCCCCEEE---
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQI-----------IPAEEHAAKIASARDAIGDSDFVL--- 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l-----------~~~ee~~~kI~Aa~~a~~~~d~~I--- 67 (173)
||-+.....+.++.++++||..|+|-=-- .-....|..+ ++.+...+-|+..++...+..+++
T Consensus 27 GdP~~~~~~~~~~~l~~~GaD~iElgiPf---SDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y 103 (267)
T 3vnd_A 27 GDPSPELSLKIIQTLVDNGADALELGFPF---SDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLY 103 (267)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSSEEEECCC---SCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCC---CCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 66677889999999999999999986110 0001122111 223344455555554323334555
Q ss_pred ------------------ecCCcccccCCCCHHHHhhh-----h-c-------CCCCCHHHHH---hCCccEEE----ec
Q 037554 68 ------------------ARADASFVEAPRNDNEANWV-----W-G-------HTLHTPEELK---AMGFHLTV----HP 109 (173)
Q Consensus 68 ------------------AGAD~ifv~g~~~~e~i~~i-----~-g-------~p~~~~~eL~---~lGv~~v~----~~ 109 (173)
+|+|++.+|-+.. ++..++ . | +|..+.++++ +.+-.+|- .|
T Consensus 104 ~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~G 182 (267)
T 3vnd_A 104 ANLVFANGIDEFYTKAQAAGVDSVLIADVPV-EESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAG 182 (267)
T ss_dssp HHHHHHHCHHHHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCC
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCC
Confidence 9999988877643 333332 1 2 4545544444 44433332 23
Q ss_pred hHHHHH-HHHHHHHHHHHHHHcCCcc-cccccCCCHHHHH
Q 037554 110 LTALYA-SARALVDVLKTLKESGTTR-DHLEKMGTFEEFN 147 (173)
Q Consensus 110 ~~~~~a-a~~a~~~~~~~l~~~g~~~-~~~~~~~~~~e~~ 147 (173)
.+..+. ....+.+.++.+++.-+.. ....+.-+.+++.
T Consensus 183 vTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~ 222 (267)
T 3vnd_A 183 VTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVR 222 (267)
T ss_dssp CC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHH
T ss_pred CCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 333343 2334667777777653321 1122333455555
No 100
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=74.47 E-value=1.5 Score=34.87 Aligned_cols=21 Identities=19% Similarity=0.154 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHhCceEEEe
Q 037554 6 ALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~i 26 (173)
+..+.+.++.++++|+.||.+
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~ 55 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI 55 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE
T ss_pred cchHHHHHHHHHHCCCcEEEE
Confidence 567899999999999999987
No 101
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=74.23 E-value=33 Score=28.49 Aligned_cols=68 Identities=12% Similarity=-0.018 Sum_probs=46.7
Q ss_pred ecCCcccccCCCCHHHHhhh------------h-cC--------------C--CCCHHHHHhCCccEEEechHHHHH---
Q 037554 68 ARADASFVEAPRNDNEANWV------------W-GH--------------T--LHTPEELKAMGFHLTVHPLTALYA--- 115 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i------------~-g~--------------p--~~~~~eL~~lGv~~v~~~~~~~~a--- 115 (173)
.|++.|++|-+.+.+|++++ . |. | ...++++.+. +..+|+|+.=+..
T Consensus 134 ~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~-vD~~siGtnDLtq~~l 212 (324)
T 2xz9_A 134 YGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE-VDFFSIGTNDLTQYTL 212 (324)
T ss_dssp GSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT-CSEEEECHHHHHHHHT
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh-CcEEEECHHHHHHHHh
Confidence 59999999999999995444 0 21 1 2478898888 9999999765443
Q ss_pred -------------------HHHHHHHHHHHHHHcCCcccc
Q 037554 116 -------------------SARALVDVLKTLKESGTTRDH 136 (173)
Q Consensus 116 -------------------a~~a~~~~~~~l~~~g~~~~~ 136 (173)
...++..+...-++.|...++
T Consensus 213 g~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgv 252 (324)
T 2xz9_A 213 AVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAM 252 (324)
T ss_dssp TCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceee
Confidence 334555566666667765544
No 102
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=74.04 E-value=7 Score=32.67 Aligned_cols=66 Identities=6% Similarity=0.104 Sum_probs=44.7
Q ss_pred HHHHHHHhCceEEEe-ccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE---------------------e
Q 037554 12 TVKDLVAAGAAGCFL-EDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL---------------------A 68 (173)
Q Consensus 12 tv~~~~~aGvagi~i-EDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I---------------------A 68 (173)
+.+.++++|..+|-+ -|++.--..|+. ...+++.+||+..+++++++.. +..+++ +
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~p-D~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~a 115 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQP-DLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRS 115 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCC-SSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCC-CCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHc
Confidence 456678899999988 476542222332 2357899999999999887643 233333 7
Q ss_pred cCCcccccCC
Q 037554 69 RADASFVEAP 78 (173)
Q Consensus 69 GAD~ifv~g~ 78 (173)
||++|-+++-
T Consensus 116 Gaagv~iEDq 125 (307)
T 3lye_A 116 GVAGAHLEDQ 125 (307)
T ss_dssp TCCEEEECCB
T ss_pred CCeEEEEcCC
Confidence 8887777663
No 103
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=73.25 E-value=9.2 Score=31.91 Aligned_cols=45 Identities=11% Similarity=0.176 Sum_probs=37.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
++..+.+.++.+.++|+--|+|-|.++ +..+++..+.|++.++.-
T Consensus 147 ~~e~~~~ia~~~~~~Ga~~i~l~DT~G-----------~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 147 PAEKLAEQGKLMESYGATCIYMADSGG-----------AMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTC-----------CCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC-----------ccCHHHHHHHHHHHHHhc
Confidence 457788999999999999999999875 234788888888888765
No 104
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=73.13 E-value=15 Score=28.03 Aligned_cols=89 Identities=7% Similarity=0.035 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE---------ecCCcccccC
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL---------ARADASFVEA 77 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I---------AGAD~ifv~g 77 (173)
+..+ +....++|+.-|++.+.. ++.+++..-+++.+.... ...|+| +|||+|-+++
T Consensus 31 ~l~~-~~~~~~~G~~~v~lr~~~-------------~~~~~~~~~~~~l~~~~~~~~~l~v~~~~~~a~~~gad~v~l~~ 96 (221)
T 1yad_A 31 ELAR-IIITIQNEVDFIHIRERS-------------KSAADILKLLDLIFEGGIDKRKLVMNGRVDIALFSTIHRVQLPS 96 (221)
T ss_dssp HHHH-HHHHHGGGCSEEEECCTT-------------SCHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHTTTCCEEEECT
T ss_pred hHHH-HHHHHHCCCCEEEEccCC-------------CCHHHHHHHHHHHHHhcCcCCeEEEeChHHHHHHcCCCEEEeCC
Confidence 4433 788889999999986421 456666666666655421 125777 8999998876
Q ss_pred C-CCHHHHhhhh-----cCCCCCH---HHHHhCCccEEEech
Q 037554 78 P-RNDNEANWVW-----GHTLHTP---EELKAMGFHLTVHPL 110 (173)
Q Consensus 78 ~-~~~e~i~~i~-----g~p~~~~---~eL~~lGv~~v~~~~ 110 (173)
- .+.++++++. +....+. .+..+.|++.|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~ig~sv~t~~~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 97 GSFSPKQIRARFPHLHIGRSVHSLEEAVQAEKEDADYVLFGH 138 (221)
T ss_dssp TSCCHHHHHHHCTTCEEEEEECSHHHHHHHHHTTCSEEEEEC
T ss_pred CccCHHHHHHHCCCCEEEEEcCCHHHHHHHHhCCCCEEEECC
Confidence 4 3567777661 2112344 445678999999875
No 105
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=72.21 E-value=17 Score=30.41 Aligned_cols=107 Identities=9% Similarity=-0.044 Sum_probs=61.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCC-Cc-cCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSW-PK-KCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~-pK-rcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------- 67 (173)
++....+.++.+.++|+.+|.|-=... ++ +.....+.-+-.++-..+-|++++++. +..+.+
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~ 146 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGL 146 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHH
Confidence 578889999999999999998874311 00 001111111234555555566666553 222333
Q ss_pred ---------ecCCcccccCCC----------------CHHHHhhhh----cCC------CCCH---HHHHhCCccEEEec
Q 037554 68 ---------ARADASFVEAPR----------------NDNEANWVW----GHT------LHTP---EELKAMGFHLTVHP 109 (173)
Q Consensus 68 ---------AGAD~ifv~g~~----------------~~e~i~~i~----g~p------~~~~---~eL~~lGv~~v~~~ 109 (173)
+|+|.|-+++.+ +.+.+.++. ..| ..|. .++-+ |++.|.+|
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 899999988742 334444441 123 1343 44445 99999999
Q ss_pred hHHH
Q 037554 110 LTAL 113 (173)
Q Consensus 110 ~~~~ 113 (173)
..++
T Consensus 226 Ra~l 229 (350)
T 3b0p_A 226 RAVY 229 (350)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 106
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=71.30 E-value=2.3 Score=34.59 Aligned_cols=28 Identities=14% Similarity=0.137 Sum_probs=22.6
Q ss_pred CCCChH---HHHHHHHHHHHhCceEEEeccC
Q 037554 2 GGGNAL---NVQRTVKDLVAAGAAGCFLEDQ 29 (173)
Q Consensus 2 GyG~~~---~v~rtv~~~~~aGvagi~iEDq 29 (173)
||-||. .+.+.+++..++|+.|+.|=|-
T Consensus 95 ~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDL 125 (252)
T 3tha_A 95 VYYNLIFSYGLEKFVKKAKSLGICALIVPEL 125 (252)
T ss_dssp CCHHHHHHHCHHHHHHHHHHTTEEEEECTTC
T ss_pred eccCHHHHhhHHHHHHHHHHcCCCEEEeCCC
Confidence 566652 4678999999999999999993
No 107
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=71.29 E-value=37 Score=26.97 Aligned_cols=22 Identities=9% Similarity=-0.103 Sum_probs=19.0
Q ss_pred CCHHHHHhCCccEEEechHHHH
Q 037554 93 HTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 93 ~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
-++.++.+.|+.-|..+...++
T Consensus 203 ~ni~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 203 QRLPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp TTHHHHHHTTCCCEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEeHHHhC
Confidence 4688999999999999988775
No 108
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=70.24 E-value=23 Score=28.58 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=43.4
Q ss_pred ChHHHHHHHHHHHHhCce---EEEeccCCCCccCCCCCC-Cccc-CHHHHHHHHHHHHHhcCCCCEEE------------
Q 037554 5 NALNVQRTVKDLVAAGAA---GCFLEDQSWPKKCGHMHG-KQII-PAEEHAAKIASARDAIGDSDFVL------------ 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGva---gi~iEDq~~pKrcg~~~g-~~l~-~~ee~~~kI~Aa~~a~~~~d~~I------------ 67 (173)
++.+..+.++++.++|+. +|.|- . -|.+..+ ..+- +++...+-|++++++. +..+++
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~~~iein--~---~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~ 177 (314)
T 2e6f_A 104 SVEENVAMVRRLAPVAQEKGVLLELN--L---SCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPYFDIAHFD 177 (314)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEE--C---CCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEE--c---CCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHH
Confidence 467888999999999988 77773 1 2444322 2232 6666666666666654 234444
Q ss_pred --------ec-CCcccccC
Q 037554 68 --------AR-ADASFVEA 77 (173)
Q Consensus 68 --------AG-AD~ifv~g 77 (173)
+| +|+|.+++
T Consensus 178 ~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 178 TAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp HHHHHHHTCTTEEEEEECC
T ss_pred HHHHHHHhcCCceEEEEeC
Confidence 89 99987655
No 109
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=70.12 E-value=6.2 Score=32.51 Aligned_cols=24 Identities=13% Similarity=0.223 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhCceEEEeccCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~ 30 (173)
.++.+.++.++++||.+|++-..+
T Consensus 225 ~~~~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 225 EELIQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCB
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCc
Confidence 467788999999999999987643
No 110
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=69.05 E-value=9.4 Score=29.76 Aligned_cols=90 Identities=12% Similarity=0.157 Sum_probs=56.3
Q ss_pred HHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------ecCCcccccCCC
Q 037554 13 VKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL-------------ARADASFVEAPR 79 (173)
Q Consensus 13 v~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I-------------AGAD~ifv~g~~ 79 (173)
+.++.++||.+|.|-|.- ...|.+|..++++++++. +-+.++ .|++.|.++...
T Consensus 75 ~~~~~~~Gad~Vll~~se-----------r~l~~~e~~~~~~~a~~~--Gl~~iv~v~~~~e~~~~~~~~~~~i~~~~~~ 141 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSE-----------KRMLLADIEAVINKCKNL--GLETIVCTNNINTSKAVAALSPDCIAVEPPE 141 (219)
T ss_dssp HHHHHHHTCCEEEESBTT-----------BCCBHHHHHHHHHHHHHH--TCEEEEEESSSHHHHHHTTTCCSEEEECCCC
T ss_pred HHHHHHcCCCEEEECCcc-----------ccCCHHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHhCCCCEEEEEecc
Confidence 688899999999996642 134567888888888765 333333 577777654322
Q ss_pred ---------C--HH---HHhhh----h---------c-CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 80 ---------N--DN---EANWV----W---------G-HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 80 ---------~--~e---~i~~i----~---------g-~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
+ ++ +..++ . | ++.-..+.+.+.|++-++.|...+++
T Consensus 142 ~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 142 LIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp --------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred ccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 1 12 21111 0 1 22234566889999999999888764
No 111
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=68.36 E-value=13 Score=36.34 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
++.-+.+.+++++++|+.-|+|=|..+ +..+.++.+.|++.++.- +..+-+
T Consensus 707 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G-----------~~~P~~~~~lv~~l~~~~-~~~i~~ 757 (1165)
T 2qf7_A 707 DLKYYTNLAVELEKAGAHIIAVKDMAG-----------LLKPAAAKVLFKALREAT-GLPIHF 757 (1165)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTC-----------CCCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCccC-----------CcCHHHHHHHHHHHHHhc-CCeEEE
Confidence 345588999999999999999999874 566788888888888764 333444
No 112
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=67.62 E-value=4.1 Score=34.03 Aligned_cols=54 Identities=9% Similarity=0.126 Sum_probs=36.3
Q ss_pred HHHHHHHhCceEEEe-ccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEE
Q 037554 12 TVKDLVAAGAAGCFL-EDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFV 66 (173)
Q Consensus 12 tv~~~~~aGvagi~i-EDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~ 66 (173)
+.+.++++|..+|-+ -|+..--..|+.. ..+++.+||+.++++++++..+..++
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~pD-~~~vt~~em~~~~~~I~~~~~~~Pvi 84 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQAD-LGICTLNDMRANAEMISNISPSTPVI 84 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCCS-SSCCCHHHHHHHHHHHHTTSTTSCEE
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCCC-CCcCCHHHHHHHHHHHHhhccCCCEE
Confidence 456678899999988 4765322233432 35789999999999988764333333
No 113
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=67.48 E-value=4.3 Score=33.59 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=47.9
Q ss_pred HHHHHHHhCceEEEecc-CCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------------ec
Q 037554 12 TVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------------AR 69 (173)
Q Consensus 12 tv~~~~~aGvagi~iED-q~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------------AG 69 (173)
+.+.++++|..+|-+-| ++.-- .|+.. ..+++.+||+..+++++++...| +++ +|
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~-~G~pD-~~~vt~~em~~~~~~I~~~~~~P-viaD~d~Gyg~~~~~~~~v~~l~~aG 103 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSAS-YAVPD-ANILSMSTHLEMMRAIASTVSIP-LIADIDTGFGNAVNVHYVVPQYEAAG 103 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHH-TTSCT-TTCSCHHHHHHHHHHHHTTCSSC-EEEECTTTTSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEChHHHHHh-CCCCC-CCCCCHHHHHHHHHHHHhcCCCC-EEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 45677889999999997 44322 44433 35899999999999999887655 544 89
Q ss_pred CCcccccCC
Q 037554 70 ADASFVEAP 78 (173)
Q Consensus 70 AD~ifv~g~ 78 (173)
|++|-+++-
T Consensus 104 a~gv~iED~ 112 (290)
T 2hjp_A 104 ASAIVMEDK 112 (290)
T ss_dssp CSEEEEECB
T ss_pred CeEEEEcCC
Confidence 998888663
No 114
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=67.21 E-value=4 Score=33.08 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhCceEEEe-ccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc-CCCCEEE----------ecCCccc
Q 037554 7 LNVQRTVKDLVAAGAAGCFL-EDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI-GDSDFVL----------ARADASF 74 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~i-EDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~-~~~d~~I----------AGAD~if 74 (173)
.+..+..+.|+++ ++||.+ -|..+ +.|. -+....|+.+++-- -..||++ +|||+|.
T Consensus 61 ~~~~~iA~~y~~~-A~~IsVlTd~~~------F~gs-----~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~il 128 (251)
T 1i4n_A 61 ASLEDFIRMYDEL-ADAISILTEKHY------FKGD-----PAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAIL 128 (251)
T ss_dssp CCHHHHHHHHHHH-CSEEEEECCCSS------SCCC-----THHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHh-CCceEEEecccc------cCCC-----HHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEE
Confidence 4778889999999 999987 45432 1221 13444444332110 0135555 9999998
Q ss_pred ccCC-CCHHHHhhh-----h-c-CC---CCCHHHH---HhC-CccEEEech
Q 037554 75 VEAP-RNDNEANWV-----W-G-HT---LHTPEEL---KAM-GFHLTVHPL 110 (173)
Q Consensus 75 v~g~-~~~e~i~~i-----~-g-~p---~~~~~eL---~~l-Gv~~v~~~~ 110 (173)
+... .+.+++..+ . | .+ ..+.+|+ .++ |.+.|.+.+
T Consensus 129 Li~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 129 IIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp EEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEEC
T ss_pred EecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeC
Confidence 7654 466777777 2 4 22 3566666 467 999987765
No 115
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=67.04 E-value=8.3 Score=32.12 Aligned_cols=43 Identities=9% Similarity=-0.020 Sum_probs=34.0
Q ss_pred ecCCcccccCCCCHHHHhhh----------h--c-CCCCCHHHHHhCCccEEEechH
Q 037554 68 ARADASFVEAPRNDNEANWV----------W--G-HTLHTPEELKAMGFHLTVHPLT 111 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i----------~--g-~p~~~~~eL~~lGv~~v~~~~~ 111 (173)
+|||.|..... +++++++. + | --.-++.++.+.|++.+|.|..
T Consensus 228 aGaD~I~LDn~-~~~~l~~av~~i~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 228 HGARSVLLDNF-TLDMMRDAVRVTEGRAVLEVSGGVNFDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp TTCEEEEEESC-CHHHHHHHHHHHTTSEEEEEESSCSTTTHHHHHHTTCSEEECGGG
T ss_pred cCCCEEEECCC-CHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEECCe
Confidence 99999999874 67777765 1 2 3346889999999999999864
No 116
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=66.20 E-value=4.3 Score=32.00 Aligned_cols=67 Identities=18% Similarity=0.136 Sum_probs=39.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCC-CCcccCHHHHHHHHHHHHHhcCCCCEEE------------ecCC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMH-GKQIIPAEEHAAKIASARDAIGDSDFVL------------ARAD 71 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~-g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------AGAD 71 (173)
+..+..+.++.++++|+.-|||..-. ||.- .... . .+.+.+||...+..-+.+|+| +|||
T Consensus 15 D~~~l~~~i~~~~~~Gad~ihldi~D-----G~fvp~~~~-g-~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGad 87 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGADWIHVDVMD-----GRFVPNITI-G-PLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGAD 87 (230)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEB-----SSSSSCBCB-C-HHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCS
T ss_pred CHhHHHHHHHHHHHcCCCEEEEEEEe-----cCCCcchhh-h-HHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCC
Confidence 45688899999999999999988521 2221 1111 1 245555553221111122333 9999
Q ss_pred cccccCC
Q 037554 72 ASFVEAP 78 (173)
Q Consensus 72 ~ifv~g~ 78 (173)
+|.++..
T Consensus 88 gv~vh~e 94 (230)
T 1tqj_A 88 IISVHVE 94 (230)
T ss_dssp EEEEECS
T ss_pred EEEECcc
Confidence 9988765
No 117
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=66.14 E-value=29 Score=31.01 Aligned_cols=93 Identities=16% Similarity=0.088 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEA 77 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g 77 (173)
.+..+.+++..+.|+.-|+|-+...+ . ....+.+.+|+...+.. +..|+| +|||+|=+..
T Consensus 25 ~~l~~~ve~al~~Gv~~vQlR~K~~~-------~---~~~~~~a~~l~~l~~~~-~v~liIND~~dlA~~~gAdGVHLgq 93 (540)
T 3nl6_A 25 KTLYGQVEAGLQNGVTLVQIREKDAD-------T---KFFIEEALQIKELCHAH-NVPLIINDRIDVAMAIGADGIHVGQ 93 (540)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCSSSC-------T---THHHHHHHHHHHHHHHT-TCCEEECSCSHHHHHTTCSEEEECT
T ss_pred chHHHHHHHHHHCCCCEEEEecCCCC-------H---HHHHHHHHHHHHHHHhc-CCEEEEeCcHHHHHHcCCCEEEECh
Confidence 35778899999999999999987542 1 12345666666666543 456777 8999987744
Q ss_pred CC-CHHHHhhhh------cCCCCCHHHH---HhCC---ccEEEech
Q 037554 78 PR-NDNEANWVW------GHTLHTPEEL---KAMG---FHLTVHPL 110 (173)
Q Consensus 78 ~~-~~e~i~~i~------g~p~~~~~eL---~~lG---v~~v~~~~ 110 (173)
-. +..+++++- |....+.+|+ .+.| ++.|.+|+
T Consensus 94 ~dl~~~~ar~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gp 139 (540)
T 3nl6_A 94 DDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGT 139 (540)
T ss_dssp TSSCHHHHHHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEESC
T ss_pred hhcCHHHHHHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcC
Confidence 21 356677661 3223455554 5678 99998853
No 118
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=65.95 E-value=15 Score=30.25 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=40.6
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
.|.++++.+.+-.+|||+-+||==.. . .|++-.+++.+.+-+.++|++ .+|++|
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd-~------~G~ps~d~~~~~e~~~~IR~~--~pd~ii 85 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIRE-D------DGRPSQRLDRFQEAISAIREV--VPEIII 85 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEEC-T------TSCEECCHHHHHHHHHHHHHH--CTTSEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecC-C------CCCcCCCHHHHHHHHHHHHHH--CCCeEE
Confidence 36789999999999999999873211 0 255667888888888877766 478888
No 119
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=65.71 E-value=3.1 Score=32.24 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=22.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEec--cCCC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE--DQSW 31 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE--Dq~~ 31 (173)
++.+..+.++.+.++|+..|+|- |..+
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~~dg~f 49 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRF 49 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeccCCc
Confidence 56788899999999999988886 6654
No 120
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=65.26 E-value=25 Score=27.18 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCceEEEeccCC
Q 037554 10 QRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iEDq~ 30 (173)
.+.++.+.++||.+|++-|-.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~ 118 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLP 118 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCC
T ss_pred HHHHHHHHHCCCCEEEECCCC
Confidence 678999999999999998753
No 121
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=64.69 E-value=17 Score=30.33 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---ecCCccc
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---ARADASF 74 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---AGAD~if 74 (173)
|.++++.+.+-.+|||+-+||==.. | -.|++..+++.+.+-|.+++++ +|++| .|+...+
T Consensus 31 peEia~~A~~~~~AGAaivHlHvRd-p-----~dG~ps~d~~~y~e~i~~IR~~---~d~iI~~TTgg~~~~ 93 (314)
T 3lot_A 31 PDQIVEEAVKAAEAGAGMVHIHARD-P-----KDGRPTTDVEVFRYICREIKKQ---SDVVINVTTGGGGTL 93 (314)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEEC-T-----TTCCEECCHHHHHHHHHHHHHH---CCCEEEECSSTTGGG
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecC-C-----CCCCcCCCHHHHHHHHHHHHhc---CCeEEEeCCCCcCCC
Confidence 5788999999999999999983111 0 0245667888888877777765 57777 4544333
No 122
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=64.58 E-value=17 Score=29.80 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
|.++++.+.+-.+|||+-+||==-. | .|++..+++.+.+-|.++|++. ||++|
T Consensus 29 peEia~~A~~~~~AGAaivHlHvRd-~------~G~~s~d~~~~~e~~~~IR~~~--pd~ii 81 (275)
T 3no5_A 29 VSEQVESTQAAFEAGATLVHLHVRN-D------DETPTSNPDRFALVLEGIRKHA--PGMIT 81 (275)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECEEC-T------TSCEECCHHHHHHHHHHHHHHS--TTCEE
T ss_pred HHHHHHHHHHHHHccCcEEEEeecC-C------CCCcCCCHHHHHHHHHHHHHhC--CCeEE
Confidence 5789999999999999999984211 1 2456678888888888877763 68888
No 123
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=64.53 E-value=3.1 Score=33.16 Aligned_cols=26 Identities=12% Similarity=0.253 Sum_probs=21.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEec--cCCC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE--DQSW 31 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE--Dq~~ 31 (173)
+..+..+.++.+ ++|+.-+|+. |..+
T Consensus 11 D~~~l~~~i~~~-~~gad~lHvDvmDG~f 38 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHIDIMDGHF 38 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEEEECSSS
T ss_pred ChhhHHHHHHHH-HcCCCEEEEEEEeCcc
Confidence 446788999999 9999998887 7655
No 124
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=64.17 E-value=6.1 Score=32.85 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=45.7
Q ss_pred HHHHHHHhCceEEEecc-CCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------------ec
Q 037554 12 TVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------------AR 69 (173)
Q Consensus 12 tv~~~~~aGvagi~iED-q~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------------AG 69 (173)
+.+.++++|..+|-+-| ++.--..|+. ...+++.+|++..+++++++..-| +++ +|
T Consensus 34 sA~l~e~aGf~ai~vs~~s~a~~~~G~p-D~~~vt~~em~~~~~~I~r~~~~P-viaD~d~Gyg~~~~v~~~v~~l~~aG 111 (298)
T 3eoo_A 34 AAKMAEAVGFKAVYLSGGGVAANSLGIP-DLGISTMDDVLVDANRITNATNLP-LLVDIDTGWGGAFNIARTIRSFIKAG 111 (298)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHTTCCC-SSSCCCHHHHHHHHHHHHHHCCSC-EEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECcHHHHHHhcCCC-CCCCCCHHHHHHHHHHHHhhcCCe-EEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 44667899999999999 4332233443 235789999999999998875433 333 88
Q ss_pred CCcccccC
Q 037554 70 ADASFVEA 77 (173)
Q Consensus 70 AD~ifv~g 77 (173)
|++|-+++
T Consensus 112 aagv~iED 119 (298)
T 3eoo_A 112 VGAVHLED 119 (298)
T ss_dssp CSEEEEEC
T ss_pred CeEEEECC
Confidence 88888776
No 125
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=63.83 E-value=3.6 Score=34.04 Aligned_cols=66 Identities=11% Similarity=-0.005 Sum_probs=48.7
Q ss_pred HHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------------ec
Q 037554 12 TVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------------AR 69 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------------AG 69 (173)
+.+.++++|..+|-+-|. +.--..|+.. ..+++.+||+..+++++++...| +++ +|
T Consensus 33 sA~i~e~aGf~ai~vs~s~~a~~~lG~pD-~~~vt~~em~~~~~~I~r~~~~P-viaD~d~Gyg~~~~~~~~v~~l~~aG 110 (287)
T 3b8i_A 33 SARIAADLGFECGILGGSVASLQVLAAPD-FALITLSEFVEQATRIGRVARLP-VIADADHGYGNALNVMRTVVELERAG 110 (287)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHSCCS-SSCSCHHHHHHHHHHHHTTCSSC-EEEECTTCSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHhcCCCC-CCCCCHHHHHHHHHHHHhcCCCC-EEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 456778899999999997 3212234433 35899999999999999886555 444 89
Q ss_pred CCcccccCCC
Q 037554 70 ADASFVEAPR 79 (173)
Q Consensus 70 AD~ifv~g~~ 79 (173)
|++|-+++-.
T Consensus 111 a~gv~iED~~ 120 (287)
T 3b8i_A 111 IAALTIEDTL 120 (287)
T ss_dssp CSEEEEECBC
T ss_pred CeEEEEcCCC
Confidence 9998887743
No 126
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=63.38 E-value=57 Score=26.83 Aligned_cols=20 Identities=5% Similarity=-0.097 Sum_probs=16.7
Q ss_pred HHHHHhCCccEEEechHHHH
Q 037554 95 PEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 95 ~~eL~~lGv~~v~~~~~~~~ 114 (173)
+.++.++|++-|..|..+++
T Consensus 224 v~~~~~~GAdgVlVGsai~~ 243 (297)
T 4adt_A 224 AAMCMQLGMDGVFVGSGIFE 243 (297)
T ss_dssp HHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHcCCCEEEEhHHHHc
Confidence 45677889999999998885
No 127
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=62.06 E-value=62 Score=26.18 Aligned_cols=23 Identities=13% Similarity=0.237 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhCceEEEeccCC
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~ 30 (173)
.+.+.++++.++||.|+.|=|-.
T Consensus 113 g~~~f~~~~~~aGvdGvIipDlp 135 (271)
T 3nav_A 113 GIDDFYQRCQKAGVDSVLIADVP 135 (271)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSC
T ss_pred hHHHHHHHHHHCCCCEEEECCCC
Confidence 35778999999999999998853
No 128
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=62.03 E-value=25 Score=27.07 Aligned_cols=85 Identities=16% Similarity=0.109 Sum_probs=52.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++.+....++.+.+.|+.-|.+-.... ...+.|+.+++ +++.+ +
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k~~----------------~~~~~i~~~~~----~~~~~gag~vl~~d~~~~A~~~ 82 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLRTE----------------KGLEALKALRK----SGLLLGAGTVRSPKEAEAALEA 82 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECSST----------------HHHHHHHHHTT----SSCEEEEESCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCh----------------HHHHHHHHHhC----CCCEEEeCeEeeHHHHHHHHHc
Confidence 345677889999999999998875431 12233444433 33333 8
Q ss_pred cCCcccccCCCCHHHHhhhh--cCC----CCCHHH---HHhCCccEEEech
Q 037554 69 RADASFVEAPRNDNEANWVW--GHT----LHTPEE---LKAMGFHLTVHPL 110 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i~--g~p----~~~~~e---L~~lGv~~v~~~~ 110 (173)
|||.|..+. .+.+.++... |.| ..|++| ..++|++.+.+-+
T Consensus 83 GAd~v~~~~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~fp 132 (207)
T 2yw3_A 83 GAAFLVSPG-LLEEVAALAQARGVPYLPGVLTPTEVERALALGLSALKFFP 132 (207)
T ss_dssp TCSEEEESS-CCHHHHHHHHHHTCCEEEEECSHHHHHHHHHTTCCEEEETT
T ss_pred CCCEEEcCC-CCHHHHHHHHHhCCCEEecCCCHHHHHHHHHCCCCEEEEec
Confidence 999987764 4555544442 432 235554 4578999887743
No 129
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=61.78 E-value=6.1 Score=32.12 Aligned_cols=61 Identities=18% Similarity=0.213 Sum_probs=45.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------- 67 (173)
|.....+.++.+++. +.||.+ ||.++.-..++.+|..+=++.+++ ...+++
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v--------~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGvg~~~t~~ai~la~~A 84 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLV--------YGSNGEGVHLTPEERARGLRALRP---RKPFLVGLMEETLPQAEGALLEA 84 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEE--------TCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEECCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh-CCEEEE--------CCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeCCCCCHHHHHHHHHHH
Confidence 345678899999999 999875 555555667899988887877776 334555
Q ss_pred --ecCCcccccC
Q 037554 68 --ARADASFVEA 77 (173)
Q Consensus 68 --AGAD~ifv~g 77 (173)
+|||++++..
T Consensus 85 ~~~Gadavlv~~ 96 (283)
T 2pcq_A 85 KAAGAMALLATP 96 (283)
T ss_dssp HHHTCSEEEECC
T ss_pred HhcCCCEEEecC
Confidence 8999987643
No 130
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=61.63 E-value=31 Score=26.44 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=54.5
Q ss_pred HHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------ecCCcc--c
Q 037554 10 QRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL-------------ARADAS--F 74 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I-------------AGAD~i--f 74 (173)
.+.++.+.++|+..|+|.=.... +..+ ....+.+++++.. ..+..+++ +|||.| .
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~----~~~~---~~~~~~i~~i~~~---~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~ 160 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRD----RHDG---LDIASFIRQVKEK---YPNQLLMADISTFDEGLVAHQAGIDFVGTT 160 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSC----CTTC---CCHHHHHHHHHHH---CTTCEEEEECSSHHHHHHHHHTTCSEEECT
T ss_pred HHHHHHHHHcCCCEEEEcccccC----CCCC---ccHHHHHHHHHHh---CCCCeEEEeCCCHHHHHHHHHcCCCEEeee
Confidence 45688899999999987543211 0001 1234555555543 21222222 899988 4
Q ss_pred ccCCC---------CHHHHhhhh--cCC---------CCCHHHHHhCCccEEEechHHHH
Q 037554 75 VEAPR---------NDNEANWVW--GHT---------LHTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 75 v~g~~---------~~e~i~~i~--g~p---------~~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
+.+.. +.+.++++. ..| .-++.++.++|++.|..|..++.
T Consensus 161 v~g~~~~~~~~~~~~~~~i~~~~~~~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 161 LSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp TTTSSTTSCCSSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred ccccCCCCcCCCCCCHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 44321 234455541 122 23567788899999999987765
No 131
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=61.57 E-value=12 Score=31.78 Aligned_cols=90 Identities=12% Similarity=0.105 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCc----------cCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEEecCCcccc
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPK----------KCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVLARADASFV 75 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pK----------rcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv 75 (173)
..++...++.++++||.||.+-..+... ..|-+.|+.+-+. ..+-|+.++++.. .++ ..|-.
T Consensus 233 ~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~--a~~~v~~i~~~v~-~~i-----pvI~~ 304 (367)
T 3zwt_A 233 SQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDL--STQTIREMYALTQ-GRV-----PIIGV 304 (367)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHH--HHHHHHHHHHHTT-TCS-----CEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchh--HHHHHHHHHHHcC-CCc-----eEEEE
Confidence 3577888999999999999987654210 0111123333222 2333444444432 122 22344
Q ss_pred cCCCCHHHHhhhhcCCCCCHHHHHhCCccEEEechHHHH
Q 037554 76 EAPRNDNEANWVWGHTLHTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 76 ~g~~~~e~i~~i~g~p~~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
-|+.+.+++ .++-+.|.+.|.++..++.
T Consensus 305 GGI~s~~da-----------~~~l~~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 305 GGVSSGQDA-----------LEKIRAGASLVQLYTALTF 332 (367)
T ss_dssp SSCCSHHHH-----------HHHHHHTCSEEEESHHHHH
T ss_pred CCCCCHHHH-----------HHHHHcCCCEEEECHHHHh
Confidence 556666665 3444578888888877643
No 132
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=61.24 E-value=19 Score=30.55 Aligned_cols=43 Identities=9% Similarity=0.052 Sum_probs=35.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
++.-+.+.++.+.++ +.-|+|-|.++ +..|.++.+.|++.++.
T Consensus 143 ~~~~~~~~~~~~~~~-a~~i~l~DT~G-----------~~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 143 EEQDLLAVYEAVAPY-VDRVGLADTVG-----------VATPRQVYALVREVRRV 185 (382)
T ss_dssp CHHHHHHHHHHHGGG-CSEEEEEETTS-----------CCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-cCEEEecCCCC-----------CCCHHHHHHHHHHHHHh
Confidence 466788899999999 99999999874 45678888888888774
No 133
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=61.17 E-value=98 Score=29.44 Aligned_cols=65 Identities=22% Similarity=0.145 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCC-----CCcc-cCHHHHHHHHHHHHHhcCCCCEEE-----------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMH-----GKQI-IPAEEHAAKIASARDAIGDSDFVL----------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~-----g~~l-~~~ee~~~kI~Aa~~a~~~~d~~I----------- 67 (173)
++....+.+++++++|+.+|.|-=. |.+.. |..+ .+++...+-|++++++. +..+++
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~-----~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~~~~~~ 719 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLS-----CPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTPNVTDIVS 719 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECC-----CBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECC-----CCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCCChHHHHH
Confidence 5788899999999999999999422 22321 1122 45666666677666653 334444
Q ss_pred -------ecCCcccc
Q 037554 68 -------ARADASFV 75 (173)
Q Consensus 68 -------AGAD~ifv 75 (173)
+|+|+|-+
T Consensus 720 ~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 720 IARAAKEGGADGVTA 734 (1025)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 89999887
No 134
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=61.16 E-value=8.8 Score=32.11 Aligned_cols=66 Identities=17% Similarity=0.081 Sum_probs=44.1
Q ss_pred HHHHHHHHhCceE-------EEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE--------------
Q 037554 11 RTVKDLVAAGAAG-------CFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL-------------- 67 (173)
Q Consensus 11 rtv~~~~~aGvag-------i~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I-------------- 67 (173)
+.+......|+.. +.+||.+.|. ..++..+.+..+..... +..++|
T Consensus 33 ~~~eka~~~~aD~~~~~~vilDLEDaVa~~-----------~K~~AR~~v~~~L~~~~~~~~~~~VRIN~~~t~~~~~DL 101 (332)
T 3qqw_A 33 KLIGKAMDLQVEYGPVFDVTCDCEDGAAAG-----------QEREHAEMVARMIASDRNVHGRAGARIHDPSHPAWRQDV 101 (332)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEHHHHSCTT-----------CHHHHHHHHHHHHHSTTCCSSCEEEECCCTTSTTHHHHH
T ss_pred HHHHHHHhCCCCcCCCCcEEEECCCCCCCC-----------cHHHHHHHHHHHHhcCcccCCEEEEEECCCCChHHHHHH
Confidence 3445555556554 6789998651 23455566666665432 245666
Q ss_pred -----e---cCCcccccCCCCHHHHhhh
Q 037554 68 -----A---RADASFVEAPRNDNEANWV 87 (173)
Q Consensus 68 -----A---GAD~ifv~g~~~~e~i~~i 87 (173)
+ |.|+|++|-+.+.++++.+
T Consensus 102 ~av~~~~~~g~dgI~LPKvesa~dv~~~ 129 (332)
T 3qqw_A 102 DIIVNGAGGRLAYITVPKATNSGQVAEV 129 (332)
T ss_dssp HHHHHHSTTCCCCEEECCCCSHHHHHHH
T ss_pred HHHHhhcccCCCEEEeCCCCCHHHHHHH
Confidence 3 8999999999999998876
No 135
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=61.09 E-value=22 Score=29.30 Aligned_cols=53 Identities=11% Similarity=0.103 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
|.++++.+.+-.+|||+-+||==-. | .|++-.+++.+.+-+.+++++ .+|++|
T Consensus 33 peEia~~A~~~~~AGAaivHlH~Rd-~------~G~ps~d~~~~~e~~~~IR~~--~pd~ii 85 (284)
T 3chv_A 33 VSEQVESTQEAFEAGAAIAHCHVRN-D------DGTPSSDPDRFARLTEGLHTH--CPGMIV 85 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECEEC-T------TSCEECCHHHHHHHHHHHHHH--STTCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeeecC-C------CCCcCCCHHHHHHHHHHHHHh--CCCeEE
Confidence 5789999999999999999983211 1 145566888888878777766 468888
No 136
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=60.26 E-value=25 Score=28.87 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=37.6
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
|++++..+.+.++++.+.|-.++-| +.|| ++++-+++|++++++ .+|+-|
T Consensus 136 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~d~~~v~avr~~--g~~~~l 185 (345)
T 2zad_A 136 GIDTVENRVKEAKKIFEEGFRVIKI-------KVGE-------NLKEDIEAVEEIAKV--TRGAKY 185 (345)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEE-------ECCS-------CHHHHHHHHHHHHHH--STTCEE
T ss_pred cCCCHHHHHHHHHHHHHcCcCEEEE-------eecC-------CHHHHHHHHHHHHhh--CCCCeE
Confidence 3457788888999999999999887 2343 567788999999998 345443
No 137
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=59.76 E-value=14 Score=30.67 Aligned_cols=64 Identities=16% Similarity=0.096 Sum_probs=45.9
Q ss_pred HHHHHHHhCceEEEecc-CCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------------ec
Q 037554 12 TVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------------AR 69 (173)
Q Consensus 12 tv~~~~~aGvagi~iED-q~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------------AG 69 (173)
+.+.++++|..+|-+-| ++.- -.|+. ...+++.+||+..+++++++..-| +++ +|
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~-~~G~p-D~~~vt~~em~~~~~~I~r~~~~p-viaD~d~Gyg~~~~v~~~v~~l~~aG 117 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTA-SKGLP-DLGIVTSTEVAERARDLVRATDLP-VLVDIDTGFGGVLNVARTAVEMVEAK 117 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH-HHTCC-SSSCSCHHHHHHHHHHHHHHHCCC-EEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECcHHHHH-hCCCC-CCCcCCHHHHHHHHHHHHHhcCCC-EEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 55677889999999999 3321 12443 235789999999999998876433 333 88
Q ss_pred CCcccccCC
Q 037554 70 ADASFVEAP 78 (173)
Q Consensus 70 AD~ifv~g~ 78 (173)
|++|-+++-
T Consensus 118 aagv~iED~ 126 (305)
T 3ih1_A 118 VAAVQIEDQ 126 (305)
T ss_dssp CSEEEEECB
T ss_pred CcEEEECCC
Confidence 888887763
No 138
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=59.70 E-value=21 Score=29.84 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---ecCCcccc
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---ARADASFV 75 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---AGAD~ifv 75 (173)
|.++++.+.+-.+|||+-+||==.. |+ .|++-.+++.+.+-+.++|++ .+|++| .|+-++++
T Consensus 47 peEIa~~A~~a~~AGAaivHlHvRd-~~-----~G~ps~d~~~y~e~~~~IR~~--~~d~ii~~TTg~gg~~~ 111 (316)
T 3c6c_A 47 PAQIADACVEAAKAGASVAHIHVRD-PK-----TGGGSRDPVLFKEVVDRVRSS--GTDIVLNLTCGLGAFLL 111 (316)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEEC-TT-----TCCEECCHHHHHHHHHHHHTT--TCCCEEEEECCCSEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecC-CC-----CCCcCCCHHHHHHHHHHHHHH--CCCeEEEeCCCcccccc
Confidence 5789999999999999999983111 00 245666888888878777765 478888 55444444
No 139
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=59.67 E-value=10 Score=31.96 Aligned_cols=43 Identities=19% Similarity=0.055 Sum_probs=32.9
Q ss_pred ecCCcccccCCCCHHHHhhh-h-----------c-CCCCCHHHHHhCCccEEEechH
Q 037554 68 ARADASFVEAPRNDNEANWV-W-----------G-HTLHTPEELKAMGFHLTVHPLT 111 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-~-----------g-~p~~~~~eL~~lGv~~v~~~~~ 111 (173)
+|||.|.+... ++++++++ . | .-.-++.++.+.|++.++.|..
T Consensus 250 aGaD~I~LDn~-~~~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 250 AGADIIMLDNF-SLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp TTCSEEEEESC-CHHHHHHHHHHHTTSSEEEEESSCCHHHHHHHHTTTCSEEECTHH
T ss_pred cCCCEEEECCC-CHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEECce
Confidence 99999999874 77887776 1 1 1124678899999999999864
No 140
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=58.86 E-value=48 Score=27.27 Aligned_cols=115 Identities=17% Similarity=0.079 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCC---CccCCCCC-CCcccCHHHHHHHHHHHHHhcCCCCEEE--ec-CCcccccCC-
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSW---PKKCGHMH-GKQIIPAEEHAAKIASARDAIGDSDFVL--AR-ADASFVEAP- 78 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~---pKrcg~~~-g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--AG-AD~ifv~g~- 78 (173)
.|+..|-+-.+.|-..|+.+|=..+ .+--+... +..+.+++|..+-++. .+.|.+= .| +-++|...+
T Consensus 118 eNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~-----TgvD~LAvaiGt~HG~Y~~~p~ 192 (288)
T 3q94_A 118 ENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEA-----TGIDCLAPALGSVHGPYKGEPN 192 (288)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHH-----HCCSEEEECSSCBSSCCSSSCC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHH-----HCCCEEEEEcCcccCCcCCCCc
Confidence 6888887777777777777775432 11001101 1235678887765542 2456443 23 455664223
Q ss_pred CCHHHHhhhh----------c---CCCCCHHHHHhCCccEEEechHHHHHHHHHHHHHHHH
Q 037554 79 RNDNEANWVW----------G---HTLHTPEELKAMGFHLTVHPLTALYASARALVDVLKT 126 (173)
Q Consensus 79 ~~~e~i~~i~----------g---~p~~~~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~ 126 (173)
-+.+-+++|. | .|.-.+.+.-++|+.-|-+.+-+..+.+.++++.+.+
T Consensus 193 Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~~ 253 (288)
T 3q94_A 193 LGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNK 253 (288)
T ss_dssp CCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHHHHh
Confidence 2677777771 2 2333456666789999999999999888888877653
No 141
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=58.86 E-value=1e+02 Score=27.72 Aligned_cols=84 Identities=10% Similarity=-0.029 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEecCCcccccCCCCHHHHhhh------------h-cC--------------C--CCCHH
Q 037554 46 AEEHAAKIASARDAIGDSDFVLARADASFVEAPRNDNEANWV------------W-GH--------------T--LHTPE 96 (173)
Q Consensus 46 ~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i------------~-g~--------------p--~~~~~ 96 (173)
++-+..-++|+..|.. .|+..|++|-+.+.+|++.+ . |. | ....+
T Consensus 367 p~if~~QlrAi~rA~~------~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad 440 (575)
T 2hwg_A 367 REILRDQLRAILRASA------FGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIAR 440 (575)
T ss_dssp HHHHHHHHHHHHHHTT------SSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHH
T ss_pred hHHHHHHHHHHHHHHh------cCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHH
Confidence 5666666666666642 48889999999999995544 0 21 1 25789
Q ss_pred HHHhCCccEEEechHHHHH----------------------HHHHHHHHHHHHHHcCCcccc
Q 037554 97 ELKAMGFHLTVHPLTALYA----------------------SARALVDVLKTLKESGTTRDH 136 (173)
Q Consensus 97 eL~~lGv~~v~~~~~~~~a----------------------a~~a~~~~~~~l~~~g~~~~~ 136 (173)
++.+. +.++|+|+.=+.. ...++..+...-++.|...++
T Consensus 441 ~ia~~-vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgv 501 (575)
T 2hwg_A 441 HLAKE-VDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGM 501 (575)
T ss_dssp HHHTT-CSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHh-CCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 99887 9999999765444 445556666666666765544
No 142
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=58.79 E-value=46 Score=27.44 Aligned_cols=32 Identities=19% Similarity=0.108 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHH
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHA 50 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~ 50 (173)
+.+.++.++++|+.+|.|-|+.. .++|++++.
T Consensus 195 ~~~~~~~~~~aGad~i~i~D~~~----------~~lsp~~f~ 226 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFDSWV----------GALNQADYR 226 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTG----------GGSCHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCCcc----------ccCCHHHHH
Confidence 34556777899999999999742 267766543
No 143
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=58.51 E-value=61 Score=28.36 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=81.1
Q ss_pred ChHHHHHHHHHHHHhCceEE----EeccCCC---------------------CccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 5 NALNVQRTVKDLVAAGAAGC----FLEDQSW---------------------PKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi----~iEDq~~---------------------pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
++.+.++.+.++...|+.=| ++-||.+ .++++|..+-. -+.+||.+|-+-++++
T Consensus 169 s~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-a~~~eM~~Ra~~a~e~ 247 (444)
T 3kdn_A 169 SPEEFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANIT-ADLLEMEQRLEVLADL 247 (444)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-SSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecC-CCHHHHHHHHHHHHHc
Confidence 67889999999999888766 4444532 12333332211 2578999998888876
Q ss_pred cCCCCEEE-----------------------------------------------------ecCCcccccCC------CC
Q 037554 60 IGDSDFVL-----------------------------------------------------ARADASFVEAP------RN 80 (173)
Q Consensus 60 ~~~~d~~I-----------------------------------------------------AGAD~ifv~g~------~~ 80 (173)
- .+-++| +|||.|-++++ -+
T Consensus 248 G-~~~~mvd~~~~G~~a~~~l~~~~~~~~l~lh~HrA~~ga~~r~~~hGi~~~vl~Kl~RLaG~D~ih~gt~g~GKleg~ 326 (444)
T 3kdn_A 248 G-LKHAMVDVVITGWGALRYIRDLAADYGLAIHGHRAMHAAFTRNPYHGISMFVLAKLYRLIGIDQLHVGTAGAGKLEGE 326 (444)
T ss_dssp T-CCEEEEEHHHHCHHHHHHHHHHHHHHTCEEEEECTTTHHHHSCTTSEECHHHHHHHHHHHTCSEEECCCTTSSSBCCC
T ss_pred C-CCEEEEccccccHHHHHHHHHhccccCeEEEEccCcccccccCCCCCcCHHHHHHHHHHcCCCeeeccccccCCcCCC
Confidence 2 222333 89999998776 35
Q ss_pred HHHHhhh----------------------h------------c-CCCCCHHHHHhCCccEEEec-------hHHHHHHHH
Q 037554 81 DNEANWV----------------------W------------G-HTLHTPEELKAMGFHLTVHP-------LTALYASAR 118 (173)
Q Consensus 81 ~e~i~~i----------------------~------------g-~p~~~~~eL~~lGv~~v~~~-------~~~~~aa~~ 118 (173)
.++...+ | | +|..-.+-+..+|-+.|... +....+-..
T Consensus 327 ~~~~~~~~~~lr~~~~~~d~~~g~~~~q~w~~~~~~~PV~SGGih~~~~p~l~~~~G~Dvvl~~GGG~~gHP~G~aaGa~ 406 (444)
T 3kdn_A 327 RDITIQNARILRESHYKPDENDVFHLEQKFYSIKAAFPTSSGGLHPGNIQPVIEALGTDIVLQLGGGTLGHPDGPAAGAR 406 (444)
T ss_dssp HHHHHHHHHHHHCSEECCCTTCCSCCCEECTTCCCCEEEEESSCCTTSSHHHHHHHCSSSEEECSHHHHTCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccccCccccCcccCCCCceeccCCCCCHhHHHHHHHHhCCcEEEEcCCcccCCCCChhHHHH
Confidence 6665433 1 1 22344677889998877663 333467788
Q ss_pred HHHHHHHHHHHc
Q 037554 119 ALVDVLKTLKES 130 (173)
Q Consensus 119 a~~~~~~~l~~~ 130 (173)
|++++++...+.
T Consensus 407 A~R~A~eA~~~G 418 (444)
T 3kdn_A 407 AVRQAIDAIMQG 418 (444)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHcC
Confidence 999999988863
No 144
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=58.32 E-value=13 Score=31.11 Aligned_cols=94 Identities=17% Similarity=0.064 Sum_probs=57.5
Q ss_pred HHHHHHHHhCce-------EEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE--------------
Q 037554 11 RTVKDLVAAGAA-------GCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL-------------- 67 (173)
Q Consensus 11 rtv~~~~~aGva-------gi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I-------------- 67 (173)
+.+......|+. =+.+||.+.|. ..++..+.|..+..... +..++|
T Consensus 32 ~~~eka~~~gaD~~pv~~vilDLEDaVap~-----------~K~~Ar~~v~~~L~~~~~~~~~~~VRIN~~dt~~~~~DL 100 (339)
T 3r4i_A 32 KLMLKSLALQQQLGPVFDITLDCEDGAQVG-----------REAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDDV 100 (339)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESSTTSCSS-----------CHHHHHHHHHHHTTSSSCCSSCEEEECCCTTSTTHHHHH
T ss_pred HHHHHHHhCCCCcCCCCcEEEECCCCCCCC-----------CHHHHHHHHHHHHhcccccCCeEEEEECCCCccHHHHHH
Confidence 445555666664 47799998651 23455555655544322 245566
Q ss_pred -----e---cCCcccccCCCCHHHHhhh-------h---c----CC----------CCCHHHHHhC-CccEEEechHHHH
Q 037554 68 -----A---RADASFVEAPRNDNEANWV-------W---G----HT----------LHTPEELKAM-GFHLTVHPLTALY 114 (173)
Q Consensus 68 -----A---GAD~ifv~g~~~~e~i~~i-------~---g----~p----------~~~~~eL~~l-Gv~~v~~~~~~~~ 114 (173)
+ |.|+|++|-+.+.++++.+ + | .+ ...++++... ++..+++|..=+.
T Consensus 101 ~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~~DL~ 180 (339)
T 3r4i_A 101 RLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFGLMDFV 180 (339)
T ss_dssp HHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECHHHHH
T ss_pred HHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECHHHHH
Confidence 2 7999999999999988765 1 2 11 1356666643 6788888866544
Q ss_pred H
Q 037554 115 A 115 (173)
Q Consensus 115 a 115 (173)
+
T Consensus 181 ~ 181 (339)
T 3r4i_A 181 S 181 (339)
T ss_dssp H
T ss_pred H
Confidence 3
No 145
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=58.11 E-value=23 Score=34.60 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
+.-+.+.++.++++|+.-|+|=|.++ +..+.++.+.|++.++.-
T Consensus 691 ~~~~~~~a~~~~~~Ga~~i~l~Dt~G-----------~~~P~~~~~lv~~l~~~~ 734 (1150)
T 3hbl_A 691 LEYYVKLAKELEREGFHILAIKDMAG-----------LLKPKAAYELIGELKSAV 734 (1150)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTC-----------CCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCeeeEcCccC-----------CCCHHHHHHHHHHHHHhc
Confidence 45578999999999999999999874 566788888888888763
No 146
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=57.84 E-value=48 Score=28.54 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcc------cCHHHHHHHHHHHHHhcCCCCEEE------------
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQI------IPAEEHAAKIASARDAIGDSDFVL------------ 67 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l------~~~ee~~~kI~Aa~~a~~~~d~~I------------ 67 (173)
|.-|...=+.|.+||+. .|+=.++.-.--.+....+ .-.+-...-++-|++|+...+.+|
T Consensus 53 Pe~V~~iH~~Yl~AGAd--II~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~~l~ 130 (406)
T 1lt8_A 53 PEAVRQLHREFLRAGSN--VMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLS 130 (406)
T ss_dssp HHHHHHHHHHHHHTTCS--EEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHHHHT
T ss_pred HHHHHHHHHHHHHhCcc--ceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCcccccC
Confidence 45667777999999998 3444443110000000011 011223334556667765434455
Q ss_pred --------------------ecCCcccccCCCCHHHHhhh
Q 037554 68 --------------------ARADASFVEAPRNDNEANWV 87 (173)
Q Consensus 68 --------------------AGAD~ifv~g~~~~e~i~~i 87 (173)
+|+|++.++.+.+.+|++.+
T Consensus 131 ~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa 170 (406)
T 1lt8_A 131 AKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWA 170 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHH
Confidence 89999999999999998766
No 147
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=57.67 E-value=81 Score=28.38 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHHhcCCCCEEEecCCcccccCCCCHHHHhhh------------h-c--------------CC--CCCH
Q 037554 45 PAEEHAAKIASARDAIGDSDFVLARADASFVEAPRNDNEANWV------------W-G--------------HT--LHTP 95 (173)
Q Consensus 45 ~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i------------~-g--------------~p--~~~~ 95 (173)
.++-+..-++|+..|.. .|+..|++|-+.+.+|++++ . | +| ....
T Consensus 368 ~p~if~~QlrAi~rA~~------~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~a 441 (572)
T 2wqd_A 368 QQDIFRPQLRALLRASV------YGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALA 441 (572)
T ss_dssp CHHHHHHHHHHHHHHTT------TSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTH
T ss_pred ChHHHHHHHHHHHHHHh------cCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHH
Confidence 35666667777766642 48888999999999996653 0 2 11 2578
Q ss_pred HHHHhCCccEEEechHHHH----------------------HHHHHHHHHHHHHHHcCCcccc
Q 037554 96 EELKAMGFHLTVHPLTALY----------------------ASARALVDVLKTLKESGTTRDH 136 (173)
Q Consensus 96 ~eL~~lGv~~v~~~~~~~~----------------------aa~~a~~~~~~~l~~~g~~~~~ 136 (173)
+++.+. +.++|+|+.=+. +...++..+...-++.|...++
T Consensus 442 d~ia~~-vDf~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgi 503 (572)
T 2wqd_A 442 DVFAKE-VDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGM 503 (572)
T ss_dssp HHHHHH-CSEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHh-CCEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEE
Confidence 898888 999999977554 2445566666666667765544
No 148
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=57.49 E-value=23 Score=26.93 Aligned_cols=70 Identities=14% Similarity=0.091 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARAD 71 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD 71 (173)
.+..+.++.++++|+.+|++-|-... .. ........|+.+++.. +..+++ +|||
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~-----~~-----~~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad 101 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAA-----PE-----GRATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGAD 101 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCC-----TT-----THHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcc-----cc-----CCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCC
Confidence 35778899999999999999885421 11 1122344455554432 334444 8999
Q ss_pred cccccCC--CCHHHHhhh
Q 037554 72 ASFVEAP--RNDNEANWV 87 (173)
Q Consensus 72 ~ifv~g~--~~~e~i~~i 87 (173)
.|.+... .+++.+.++
T Consensus 102 ~V~i~~~~~~~~~~~~~~ 119 (253)
T 1h5y_A 102 KVSVNTAAVRNPQLVALL 119 (253)
T ss_dssp EEEESHHHHHCTHHHHHH
T ss_pred EEEEChHHhhCcHHHHHH
Confidence 9987542 344444443
No 149
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=57.36 E-value=4.5 Score=30.72 Aligned_cols=41 Identities=17% Similarity=0.002 Sum_probs=28.1
Q ss_pred ecCCcccccCCCCHHHHhhh-----h-c--------CCCCC----HHHHHhCCccEEEec
Q 037554 68 ARADASFVEAPRNDNEANWV-----W-G--------HTLHT----PEELKAMGFHLTVHP 109 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-----~-g--------~p~~~----~~eL~~lGv~~v~~~ 109 (173)
+|||+|.++.....+.+.++ . | +| .+ .+.+.++|+..|.+.
T Consensus 76 ~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 76 AGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICV-DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTC-SSHHHHHHHHHHHTCCEEEEE
T ss_pred cCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHHcCCCEEEEc
Confidence 89999999987664554444 1 3 12 23 577788999998764
No 150
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=56.95 E-value=12 Score=31.10 Aligned_cols=109 Identities=15% Similarity=0.067 Sum_probs=59.9
Q ss_pred HHHHHhCceE--EEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-------------------ecC
Q 037554 14 KDLVAAGAAG--CFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL-------------------ARA 70 (173)
Q Consensus 14 ~~~~~aGvag--i~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I-------------------AGA 70 (173)
......|+.. |.+||.+.| ...++....|.++..+.. ...++| +|+
T Consensus 60 eka~~~gaD~vilDLEDaV~~-----------~~k~~Ar~~l~~~l~~~~~~~~~~~VRVn~~~t~~~~~Dl~~~l~~g~ 128 (316)
T 3qll_A 60 AKAAENGADVAIIDLEDSVSQ-----------ADKEQARQKAISYLSSRPATSLPLALRINGLDTRAGIEDIHALLECGS 128 (316)
T ss_dssp ------CCSEEEEECSTTSCG-----------GGHHHHHHHHHC---------CCEEEECCCTTSHHHHHHHHHHHHSCC
T ss_pred HHHhhCCCCEEEEeCCCCCCC-----------cCHHHHHHHHHHHHhcccccCCeEEEEECCCCCchhHHHHHHHHhCCC
Confidence 3344456555 458998865 123455555555443321 244555 565
Q ss_pred --CcccccCCCCHHHHhhhh--------c--------CC--CCCHHHHHhC--CccEEEechHHHHHHH----------H
Q 037554 71 --DASFVEAPRNDNEANWVW--------G--------HT--LHTPEELKAM--GFHLTVHPLTALYASA----------R 118 (173)
Q Consensus 71 --D~ifv~g~~~~e~i~~i~--------g--------~p--~~~~~eL~~l--Gv~~v~~~~~~~~aa~----------~ 118 (173)
|+|++|-+.+.++++.+. . +| ...++++... |+..+++|..=|.+.+ .
T Consensus 129 ~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~DL~~~lG~~~~~~~l~~ 208 (316)
T 3qll_A 129 LPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAADMAADIGAASTWEPLAL 208 (316)
T ss_dssp CCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHHHHHHHTCCSSHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHHHHHHhCCCCCcHHHHH
Confidence 999999999999988761 1 11 2567787763 8888888866554433 3
Q ss_pred HHHHHHHHHHHcCCc
Q 037554 119 ALVDVLKTLKESGTT 133 (173)
Q Consensus 119 a~~~~~~~l~~~g~~ 133 (173)
+..+.+...+..|-.
T Consensus 209 ar~~iv~AaraaGi~ 223 (316)
T 3qll_A 209 ARARLVSACAMNGIP 223 (316)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCc
Confidence 344444455556643
No 151
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=56.76 E-value=24 Score=28.43 Aligned_cols=57 Identities=11% Similarity=0.022 Sum_probs=37.2
Q ss_pred HhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------------ecCCcccccCC
Q 037554 18 AAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL-------------------ARADASFVEAP 78 (173)
Q Consensus 18 ~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I-------------------AGAD~ifv~g~ 78 (173)
.+-+.=+.+||.+.|. ..++....|+++ ......++| +|+|+|++|-+
T Consensus 27 gaD~vilDlEDav~~~-----------~k~~Ar~~l~~~--~~~~~~~~VRVn~~~~~~~~~dl~~~~~~g~~gi~lPKv 93 (273)
T 1u5h_A 27 AADVVILDLEDGVAEA-----------QKPAARNALRDT--PLDPERTVVRINAGGTADQARDLEALAGTAYTTVMLPKA 93 (273)
T ss_dssp HCSEEEEESSTTSCGG-----------GHHHHHHHHHHS--CCCTTSEEEECCCTTCHHHHHHHHHHHTSCCCEEEETTC
T ss_pred CCCEEEEECCCCCCcC-----------CHHHHHHHHHhc--CcCCCeEEEEECCCCchHHHHHHHHHHhcCCCEEEeCCC
Confidence 4556667889987541 234444444443 111234555 79999999999
Q ss_pred CCHHHHhhh
Q 037554 79 RNDNEANWV 87 (173)
Q Consensus 79 ~~~e~i~~i 87 (173)
.+.++++.+
T Consensus 94 ~s~~~v~~~ 102 (273)
T 1u5h_A 94 ESAAQVIEL 102 (273)
T ss_dssp CCHHHHHTT
T ss_pred CCHHHHHHH
Confidence 999999876
No 152
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=56.63 E-value=32 Score=28.33 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHH
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAA 51 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~ 51 (173)
..+.++..+++|+.+|.|=|+.. +..++|++.+.+
T Consensus 192 ~~~~~~~qi~aGad~i~i~D~~a--------~~~~lsp~~f~~ 226 (348)
T 4ay7_A 192 SIIYANAMVEAGADVIAIADPVA--------SPDLMSPDSFRQ 226 (348)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGG--------STTTSCHHHHHH
T ss_pred HHHHHHHHHhcCCCcceeecccc--------ccccCCHHHHHH
Confidence 34556778899999999999753 345788877654
No 153
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=56.58 E-value=29 Score=26.24 Aligned_cols=91 Identities=16% Similarity=0.134 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAPR 79 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~~ 79 (173)
..+.++.+.++|+..|++.+...+ ...+-++.+.+.+|+...... +..+++ +|||+|-++...
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~-------~~~~~~~~~~~~~l~~~~~~~-~v~v~v~~~~~~a~~~gad~v~l~~~~ 104 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGD-------ALTGEARIKFAEKAQAACREA-GVPFIVNDDVELALNLKADGIHIGQED 104 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTT-------CCCHHHHHHHHHHHHHHHHHH-TCCEEEESCHHHHHHHTCSEEEECTTS
T ss_pred HHHHHHHHHHCCCCEEEEecCCCC-------HhHHHHHHHHHHHHHHHHHHc-CCeEEEcCHHHHHHHcCCCEEEECCCc
Confidence 567899999999999999976432 111100256666676555422 345666 899999874432
Q ss_pred -CHHHHhhh----h-c-CCCCC---HHHHHhCCccEEEe
Q 037554 80 -NDNEANWV----W-G-HTLHT---PEELKAMGFHLTVH 108 (173)
Q Consensus 80 -~~e~i~~i----~-g-~p~~~---~~eL~~lGv~~v~~ 108 (173)
+..++++. . + ++ .+ ..+..+.|++.+.+
T Consensus 105 ~~~~~~~~~~g~~~~~~s~-~t~~e~~~a~~~g~d~v~~ 142 (227)
T 2tps_A 105 ANAKEVRAAIGDMILGVSA-HTMSEVKQAEEDGADYVGL 142 (227)
T ss_dssp SCHHHHHHHHTTSEEEEEE-CSHHHHHHHHHHTCSEEEE
T ss_pred cCHHHHHHhcCCcEEEEec-CCHHHHHHHHhCCCCEEEE
Confidence 23333331 1 1 11 23 34456789999985
No 154
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.32 E-value=21 Score=27.65 Aligned_cols=69 Identities=12% Similarity=0.061 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCCc
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARADA 72 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD~ 72 (173)
+..+.++.++++|+..|++-|-... .. ........|+.+++. .+..+++ +|||.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~-----~~-----~~~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~ 99 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITAS-----VE-----KRKTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADK 99 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCS-----SS-----HHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchh-----hc-----CCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCE
Confidence 4566779999999999999885421 11 122344455555543 2344555 89999
Q ss_pred ccccCC--CCHHHHhhh
Q 037554 73 SFVEAP--RNDNEANWV 87 (173)
Q Consensus 73 ifv~g~--~~~e~i~~i 87 (173)
|.+... .+++.+.++
T Consensus 100 V~lg~~~l~~p~~~~~~ 116 (253)
T 1thf_D 100 VSINTAAVENPSLITQI 116 (253)
T ss_dssp EEESHHHHHCTHHHHHH
T ss_pred EEEChHHHhChHHHHHH
Confidence 987542 344444444
No 155
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=56.09 E-value=22 Score=28.27 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=67.9
Q ss_pred HHHHHHHhCceEEEe--ccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCCccc
Q 037554 12 TVKDLVAAGAAGCFL--EDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARADASF 74 (173)
Q Consensus 12 tv~~~~~aGvagi~i--EDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD~if 74 (173)
.++....+|+..|.| ||. | .+.+++..-++++ ++ .+...+| +|+|+|+
T Consensus 32 ~~e~a~~~gaD~v~lDlEd~--p-----------~~~~~a~~~~~~~-~~-~~~~~~VRv~~~~~~~i~~~l~~g~~gI~ 96 (256)
T 1dxe_A 32 STEVLGLAGFDWLVLDGEHA--P-----------NDISTFIPQLMAL-KG-SASAPVVRVPTNEPVIIKRLLDIGFYNFL 96 (256)
T ss_dssp HHHHHTTSCCSEEEEESSSS--S-----------CCHHHHHHHHHHT-TT-CSSEEEEECSSSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHhCCCCEEEEcCCCC--C-----------CCHHHHHHHHHHH-Hh-CCCcEEEECCCCCHHHHHHHHhcCCceee
Confidence 445566677776665 443 2 2345555555554 22 2334555 8999999
Q ss_pred ccCCCCHHHHhhhh---c-CC----------------------------------------CCCHHHHHhC-CccEEEec
Q 037554 75 VEAPRNDNEANWVW---G-HT----------------------------------------LHTPEELKAM-GFHLTVHP 109 (173)
Q Consensus 75 v~g~~~~e~i~~i~---g-~p----------------------------------------~~~~~eL~~l-Gv~~v~~~ 109 (173)
+|-+.+.++++++. . .| ...++++... |+..+++|
T Consensus 97 ~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG 176 (256)
T 1dxe_A 97 IPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVG 176 (256)
T ss_dssp ESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEEC
T ss_pred ecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEC
Confidence 99999999998771 1 01 0256777765 89999998
Q ss_pred hHHHHH------------HHHHHHHHHHHHHHcCCccc
Q 037554 110 LTALYA------------SARALVDVLKTLKESGTTRD 135 (173)
Q Consensus 110 ~~~~~a------------a~~a~~~~~~~l~~~g~~~~ 135 (173)
+.=+.+ ...++.+.....++.|....
T Consensus 177 ~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~ 214 (256)
T 1dxe_A 177 PSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSG 214 (256)
T ss_dssp HHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred hHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceE
Confidence 764443 33445556666667776543
No 156
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=56.00 E-value=17 Score=30.38 Aligned_cols=72 Identities=18% Similarity=0.070 Sum_probs=46.1
Q ss_pred CCChHHHHHHHHHHHHhCceEEEecc-CCCCccCCCCCCCc----ccCHHHHHHHHHHHHHhc-CCCCEEE---------
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQ----IIPAEEHAAKIASARDAI-GDSDFVL--------- 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iED-q~~pKrcg~~~g~~----l~~~ee~~~kI~Aa~~a~-~~~d~~I--------- 67 (173)
|.++..+.+.++++++.||.=|-|-= ++.| |.. .+|.+|-.+|+.-++++. ...++.|
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrP-------ga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~V 117 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNP-------FVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRV 117 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCT-------TC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCC-------CcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHH
Confidence 45677888899999999999887653 3333 333 567777777666555442 2234444
Q ss_pred ------ecCCccc-ccCCCCH
Q 037554 68 ------ARADASF-VEAPRND 81 (173)
Q Consensus 68 ------AGAD~if-v~g~~~~ 81 (173)
+|||+|- |.+.+++
T Consensus 118 a~aAl~aGa~iINDVsg~~~~ 138 (314)
T 3tr9_A 118 MREAVNTGADMINDQRALQLD 138 (314)
T ss_dssp HHHHHHHTCCEEEETTTTCST
T ss_pred HHHHHHcCCCEEEECCCCCch
Confidence 8999886 4454443
No 157
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=55.79 E-value=28 Score=26.88 Aligned_cols=70 Identities=14% Similarity=0.052 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARAD 71 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD 71 (173)
.+..+.++.++++|+..|++-|.... +. ......+.|+.+++.. +..+++ +|||
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~-------~~---~~~~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad 99 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISAT-------HE---ERAILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGAD 99 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSS-------TT---CHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcc-------cc---CccccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCC
Confidence 35678889999999999999885421 11 1233445555555432 445555 8999
Q ss_pred cccccCC--CCHHHHhhh
Q 037554 72 ASFVEAP--RNDNEANWV 87 (173)
Q Consensus 72 ~ifv~g~--~~~e~i~~i 87 (173)
+|.+... .+++.+.++
T Consensus 100 ~V~lg~~~l~~p~~~~~~ 117 (252)
T 1ka9_F 100 KVSVNSAAVRRPELIREL 117 (252)
T ss_dssp EEEECHHHHHCTHHHHHH
T ss_pred EEEEChHHHhCcHHHHHH
Confidence 9988542 344555544
No 158
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=55.76 E-value=85 Score=26.31 Aligned_cols=23 Identities=13% Similarity=0.237 Sum_probs=18.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEec
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE 27 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE 27 (173)
+.....+.+++.+++|+.+|.|-
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it 166 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILT 166 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEc
Confidence 56677889999999998877543
No 159
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=55.55 E-value=58 Score=28.16 Aligned_cols=36 Identities=17% Similarity=0.029 Sum_probs=22.3
Q ss_pred CHHHHHhCCccEEEechHHHHH---HHHHHHHHHHHHHH
Q 037554 94 TPEELKAMGFHLTVHPLTALYA---SARALVDVLKTLKE 129 (173)
Q Consensus 94 ~~~eL~~lGv~~v~~~~~~~~a---a~~a~~~~~~~l~~ 129 (173)
++.+.-.+|.+.|.++..++.. ...-+.+.++++++
T Consensus 359 Da~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~ 397 (415)
T 3i65_A 359 DALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLY 397 (415)
T ss_dssp HHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3455666899999999887644 33344444444433
No 160
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=55.45 E-value=5.8 Score=32.85 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=42.4
Q ss_pred HHHHHHHhCceEEEecc-CCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------------ec
Q 037554 12 TVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------------AR 69 (173)
Q Consensus 12 tv~~~~~aGvagi~iED-q~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------------AG 69 (173)
+.+.++++|..+|-+-+ ++.- ..|+.. ..+++.+|++..+++++++...| +++ +|
T Consensus 31 sA~~~~~aG~~ai~vsg~~~a~-~lG~pD-~~~vt~~em~~~~~~I~~~~~~P-viaD~d~Gyg~~~~v~~~v~~l~~aG 107 (295)
T 1s2w_A 31 SARIVQEAGFKGIWGSGLSVSA-QLGVRD-SNEASWTQVVEVLEFMSDASDVP-ILLDADTGYGNFNNARRLVRKLEDRG 107 (295)
T ss_dssp HHHHHHHHTCSCEEECCHHHHH-TC----------CHHHHHHHHHHHHTCSSC-EEEECCSSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEeChHHHHH-hCCCCC-CCCCCHHHHHHHHHHHHhcCCCC-EEecCCCCCCCHHHHHHHHHHHHHcC
Confidence 45677889999999995 4432 234432 35789999999999999887655 444 89
Q ss_pred CCcccccCC
Q 037554 70 ADASFVEAP 78 (173)
Q Consensus 70 AD~ifv~g~ 78 (173)
|++|-+++-
T Consensus 108 aagv~iED~ 116 (295)
T 1s2w_A 108 VAGACLEDK 116 (295)
T ss_dssp CCEEEEECB
T ss_pred CcEEEECCC
Confidence 999988764
No 161
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=55.27 E-value=60 Score=25.34 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=25.4
Q ss_pred CCHHHHHhCCccEEEechHHHH-----HHHHHHHHHHHHH
Q 037554 93 HTPEELKAMGFHLTVHPLTALY-----ASARALVDVLKTL 127 (173)
Q Consensus 93 ~~~~eL~~lGv~~v~~~~~~~~-----aa~~a~~~~~~~l 127 (173)
-++.++.+.|++.+..|...+. .+++.+++.+.+.
T Consensus 181 ~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~ 220 (228)
T 3ovp_A 181 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220 (228)
T ss_dssp TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHH
Confidence 6889999999999999988764 3444455444443
No 162
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=55.12 E-value=23 Score=29.37 Aligned_cols=90 Identities=14% Similarity=0.120 Sum_probs=54.5
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC----------CCCEEE-------------
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG----------DSDFVL------------- 67 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~----------~~d~~I------------- 67 (173)
..+...+++||.=|+|-|...- + .+.|--.. |+++++... +.||+.
T Consensus 50 ~~a~~A~~gGAdRIELc~~l~~------G--GlTPS~g~---i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~ 118 (287)
T 3iwp_A 50 ESAVNAERGGADRIELCSGLSE------G--GTTPSMGV---LQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIR 118 (287)
T ss_dssp HHHHHHHHHTCSEEEECBCGGG------T--CBCCCHHH---HHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCC------C--CCCCCHHH---HHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHH
Confidence 3466778999999999987421 1 12222222 333443211 123333
Q ss_pred ----ecCCcccccCCC-----CHHHHhhh-h---c-------------CCCCCHHHHHhCCccEEEechH
Q 037554 68 ----ARADASFVEAPR-----NDNEANWV-W---G-------------HTLHTPEELKAMGFHLTVHPLT 111 (173)
Q Consensus 68 ----AGAD~ifv~g~~-----~~e~i~~i-~---g-------------~p~~~~~eL~~lGv~~v~~~~~ 111 (173)
+|||+|.+..++ |.+.++++ . + .|.-.+++|.++||.||....+
T Consensus 119 ~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~ 188 (287)
T 3iwp_A 119 LAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGC 188 (287)
T ss_dssp HHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC
Confidence 899998875432 45566666 1 1 1234569999999999999866
No 163
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=54.57 E-value=91 Score=25.77 Aligned_cols=61 Identities=5% Similarity=-0.090 Sum_probs=38.1
Q ss_pred ecCCcccccCCCCHHHHhhhh--c----CC--------------CCCHHHHHhCCccEEEechHHHHHH--HHHHHHHHH
Q 037554 68 ARADASFVEAPRNDNEANWVW--G----HT--------------LHTPEELKAMGFHLTVHPLTALYAS--ARALVDVLK 125 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i~--g----~p--------------~~~~~eL~~lGv~~v~~~~~~~~aa--~~a~~~~~~ 125 (173)
+|.|++.. +......+++.. . +| ..|+.+..+.|.+.+..|...+.+. ..++++..+
T Consensus 170 ~G~dGvV~-s~~E~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~ 248 (303)
T 3ru6_A 170 NGLDGMVC-SVFESKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILN 248 (303)
T ss_dssp TTCSEEEC-CTTTHHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred cCCCEEEE-CHHHHHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 67777554 344566666551 0 23 1478899999999999998887653 333444444
Q ss_pred HHHH
Q 037554 126 TLKE 129 (173)
Q Consensus 126 ~l~~ 129 (173)
++.+
T Consensus 249 ~i~~ 252 (303)
T 3ru6_A 249 KIHR 252 (303)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 4544
No 164
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=53.83 E-value=6.2 Score=32.26 Aligned_cols=143 Identities=17% Similarity=0.118 Sum_probs=72.8
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcc-----------cCHHHHHHHHHHHHHhcCCCCEEE--
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQI-----------IPAEEHAAKIASARDAIGDSDFVL-- 67 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l-----------~~~ee~~~kI~Aa~~a~~~~d~~I-- 67 (173)
.||-+.....+.++.++++||..|.|-= |=.-....|..+ ++.+...+-|+..++...+..+++
T Consensus 28 aGdP~~~~~~~~~~~l~~~GaD~iElGi---PfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~ 104 (271)
T 3nav_A 28 IGDPNPEQSLAIMQTLIDAGADALELGM---PFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLM 104 (271)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEEC---CCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECC---CCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 3777778889999999999999887741 100001122211 222333444555544323445655
Q ss_pred -------------------ecCCcccccCCCCHHHHhhh-----h-c-------CCCCCH---HHHHhCCccEEEe----
Q 037554 68 -------------------ARADASFVEAPRNDNEANWV-----W-G-------HTLHTP---EELKAMGFHLTVH---- 108 (173)
Q Consensus 68 -------------------AGAD~ifv~g~~~~e~i~~i-----~-g-------~p~~~~---~eL~~lGv~~v~~---- 108 (173)
+|+|++.++.+.. ||...+ . | .|..+. +++.+++-.+|-+
T Consensus 105 Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~ 183 (271)
T 3nav_A 105 YANLVYARGIDDFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRA 183 (271)
T ss_dssp CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC
T ss_pred cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEecc
Confidence 9999988887643 333333 1 2 344444 4444555444443
Q ss_pred chHHHHHH-HHHHHHHHHHHHHcCCccc-ccccCCCHHHHH
Q 037554 109 PLTALYAS-ARALVDVLKTLKESGTTRD-HLEKMGTFEEFN 147 (173)
Q Consensus 109 ~~~~~~aa-~~a~~~~~~~l~~~g~~~~-~~~~~~~~~e~~ 147 (173)
|.+..+.. ...+.+.++.+++..+..- ..-+.-+.+++.
T Consensus 184 GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~ 224 (271)
T 3nav_A 184 GVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVK 224 (271)
T ss_dssp --------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHH
T ss_pred CCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 44444432 2346667777776543221 222333566665
No 165
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=53.80 E-value=65 Score=25.70 Aligned_cols=23 Identities=13% Similarity=0.086 Sum_probs=19.9
Q ss_pred CCHHHHHhCCccEEEechHHHHH
Q 037554 93 HTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 93 ~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
-++.++.+.|++.+..|+..+.+
T Consensus 207 ~ti~~~~~aGAD~~V~GSaIf~a 229 (246)
T 3inp_A 207 YNIAEIAVCGVNAFVAGSAIFNS 229 (246)
T ss_dssp TTHHHHHTTTCCEEEESHHHHTS
T ss_pred HHHHHHHHcCCCEEEEehHHhCC
Confidence 57899999999999999887753
No 166
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=53.67 E-value=28 Score=27.88 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=68.6
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCCcccc
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARADASFV 75 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD~ifv 75 (173)
+.++....+|+..|.|+=+-.| .+.+.+..-++++ +.. +...+| +|+|.|++
T Consensus 30 ~~~e~a~~~GaD~v~lDlE~~~-----------~~~~~~~~~~~a~-~~~-~~~~~VRv~~~~~~~i~~~l~~g~~~I~~ 96 (267)
T 2vws_A 30 YMAEIAATSGYDWLLIDGEHAP-----------NTIQDLYHQLQAV-APY-ASQPVIRPVEGSKPLIKQVLDIGAQTLLI 96 (267)
T ss_dssp HHHHHHHTTCCSEEEEETTTSC-----------CCHHHHHHHHHHH-TTS-SSEEEEECSSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCCCEEEEcCCCCC-----------CCHHHHHHHHHHH-HhC-CCcEEEEeCCCCHHHHHHHHHhCCCEEEe
Confidence 4456677788887766322111 2334454445443 222 334555 89999999
Q ss_pred cCCCCHHHHhhh-h-------c----CC---------------------------------CCCHHHHHhC-CccEEEec
Q 037554 76 EAPRNDNEANWV-W-------G----HT---------------------------------LHTPEELKAM-GFHLTVHP 109 (173)
Q Consensus 76 ~g~~~~e~i~~i-~-------g----~p---------------------------------~~~~~eL~~l-Gv~~v~~~ 109 (173)
|-+++.++++++ . | .+ ...++++.+. |+..+++|
T Consensus 97 P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG 176 (267)
T 2vws_A 97 PMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIG 176 (267)
T ss_dssp CCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEC
Confidence 999999998877 1 1 00 1257777764 79999998
Q ss_pred hHHHHH------------HHHHHHHHHHHHHHcCCccc
Q 037554 110 LTALYA------------SARALVDVLKTLKESGTTRD 135 (173)
Q Consensus 110 ~~~~~a------------a~~a~~~~~~~l~~~g~~~~ 135 (173)
+.=+.+ ...++.+.....++.|....
T Consensus 177 ~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~ 214 (267)
T 2vws_A 177 PADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAG 214 (267)
T ss_dssp HHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEE
Confidence 764433 23445556666667776543
No 167
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=53.64 E-value=51 Score=27.29 Aligned_cols=22 Identities=23% Similarity=0.154 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhCceEEEeccCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~ 30 (173)
+.+.++..+++||.+|.|-|+.
T Consensus 199 ~~~~~~~~i~aGad~i~i~D~~ 220 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFESH 220 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHHHHHHHHhCCCEEEEecCc
Confidence 3445577788999999999974
No 168
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=52.29 E-value=44 Score=28.18 Aligned_cols=92 Identities=16% Similarity=0.038 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE--------------ecCCccc
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------ARADASF 74 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------AGAD~if 74 (173)
..+.++.+.++|+.+|.| +. +| + +++...+.|+++++.-.+..+++ +|||.|.
T Consensus 154 ~~~~a~~~~~~G~d~i~i-~~------~~--g----~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~ 220 (404)
T 1eep_A 154 TIERVEELVKAHVDILVI-DS------AH--G----HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLK 220 (404)
T ss_dssp HHHHHHHHHHTTCSEEEE-CC------SC--C----SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEE-eC------CC--C----ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEE
Confidence 456677888999999988 32 22 1 12455666666666542223443 8999998
Q ss_pred c-------------c--CCCCHHHHhhh----h--cCC---------CCCHHHHHhCCccEEEechHHH
Q 037554 75 V-------------E--APRNDNEANWV----W--GHT---------LHTPEELKAMGFHLTVHPLTAL 113 (173)
Q Consensus 75 v-------------~--g~~~~e~i~~i----~--g~p---------~~~~~eL~~lGv~~v~~~~~~~ 113 (173)
+ . +..+.+.+..+ . ..| .-++..+-.+|.+.|.+|..++
T Consensus 221 vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l 289 (404)
T 1eep_A 221 VGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFA 289 (404)
T ss_dssp ECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred ECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHh
Confidence 8 1 22223323333 1 122 1245667779999999997774
No 169
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=52.12 E-value=4.3 Score=30.98 Aligned_cols=24 Identities=8% Similarity=0.070 Sum_probs=20.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEecc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLED 28 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iED 28 (173)
++.+..+.++.+.++|+.-+|+-+
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~ 37 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDI 37 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEe
Confidence 567788999999999998888875
No 170
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=51.82 E-value=9.6 Score=30.17 Aligned_cols=93 Identities=8% Similarity=0.058 Sum_probs=52.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEec--cCCCCccCCCCCCCcccCH-HHHHHHHHHHH-HhcCCCCEEE----------ecC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE--DQSWPKKCGHMHGKQIIPA-EEHAAKIASAR-DAIGDSDFVL----------ARA 70 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE--Dq~~pKrcg~~~g~~l~~~-ee~~~kI~Aa~-~a~~~~d~~I----------AGA 70 (173)
+..+..+.++.++++|+.-+|+. |..|.. .++. -..++.||... +..-+.++.| +-|
T Consensus 16 D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvp---------n~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~A 86 (227)
T 1tqx_A 16 NISKLAEETQRMESLGAEWIHLDVMDMHFVP---------NLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTS 86 (227)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS---------CBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTS
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEEEeCCcCc---------chhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhC
Confidence 34688899999999999998887 665531 1121 13444444221 1111222333 339
Q ss_pred CcccccCCC---CHH-HHh---hh-h-----c------CCCCCHHHHHhCC-ccEE
Q 037554 71 DASFVEAPR---NDN-EAN---WV-W-----G------HTLHTPEELKAMG-FHLT 106 (173)
Q Consensus 71 D~ifv~g~~---~~e-~i~---~i-~-----g------~p~~~~~eL~~lG-v~~v 106 (173)
|.+.++.-. +.. .++ .+ + | +|.-.++++.++| +.+|
T Consensus 87 d~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~V 142 (227)
T 1tqx_A 87 NQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTV 142 (227)
T ss_dssp SEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEE
T ss_pred CEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEE
Confidence 999887643 333 344 44 1 2 3434467777887 8888
No 171
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=51.71 E-value=32 Score=28.13 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=32.0
Q ss_pred ecCCcccccCCCCHHHHhhh----h-----------c-CCCCCHHHHHhCCccEEEech
Q 037554 68 ARADASFVEAPRNDNEANWV----W-----------G-HTLHTPEELKAMGFHLTVHPL 110 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i----~-----------g-~p~~~~~eL~~lGv~~v~~~~ 110 (173)
+|||.|+.+-. +++++++. . | --.-++.++.+.||..++.|.
T Consensus 213 aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 213 EKPELILLDNF-AVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp GCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred cCCCEEEECCC-CHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 89999999875 66666655 1 1 113588999999999999886
No 172
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=51.65 E-value=51 Score=27.82 Aligned_cols=11 Identities=18% Similarity=0.129 Sum_probs=8.7
Q ss_pred ecCCcccccCC
Q 037554 68 ARADASFVEAP 78 (173)
Q Consensus 68 AGAD~ifv~g~ 78 (173)
+|||+|.+...
T Consensus 246 aGadgi~v~nt 256 (367)
T 3zwt_A 246 LGIDGLIVTNT 256 (367)
T ss_dssp HTCCEEEECCC
T ss_pred cCCCEEEEeCC
Confidence 89999888653
No 173
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=51.61 E-value=40 Score=26.37 Aligned_cols=85 Identities=19% Similarity=0.173 Sum_probs=52.3
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++.+....++.+.+.|+--|.|-.... +..+. |+..++.. ++++| +
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~k~~-------------~~~~~---i~~l~~~~--~~l~vgaGtvl~~d~~~~A~~a 88 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITFRSE-------------AAADA---IRLLRANR--PDFLIAAGTVLTAEQVVLAKSS 88 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTST-------------THHHH---HHHHHHHC--TTCEEEEESCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCc-------------hHHHH---HHHHHHhC--cCcEEeeCcEeeHHHHHHHHHC
Confidence 456778899999999999999976431 12233 34333332 34444 9
Q ss_pred cCCcccccCCCCHHHHhhhh--cC---C-CCCHHH---HHhCCccEEEe
Q 037554 69 RADASFVEAPRNDNEANWVW--GH---T-LHTPEE---LKAMGFHLTVH 108 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i~--g~---p-~~~~~e---L~~lGv~~v~~ 108 (173)
|||.|..|+ .+.+-++... |. | ..|+.| ..++|++.|-+
T Consensus 89 GAd~v~~p~-~d~~v~~~ar~~g~~~i~Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 89 GADFVVTPG-LNPKIVKLCQDLNFPITPGVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp TCSEEECSS-CCHHHHHHHHHTTCCEECEECSHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECC-CCHHHHHHHHHhCCCEEeccCCHHHHHHHHHCCCCEEEE
Confidence 999998775 4554344331 32 2 234444 55679998866
No 174
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=51.05 E-value=54 Score=27.42 Aligned_cols=111 Identities=15% Similarity=0.092 Sum_probs=71.5
Q ss_pred HHHHHHHHhCceEEEe--ccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc-CCCCEEE---------------ecCCc
Q 037554 11 RTVKDLVAAGAAGCFL--EDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI-GDSDFVL---------------ARADA 72 (173)
Q Consensus 11 rtv~~~~~aGvagi~i--EDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~-~~~d~~I---------------AGAD~ 72 (173)
+.++....+|+..|.| ||.. .+.+.+...|+++.... .....+| +|+|+
T Consensus 54 ~~~e~a~~~GaD~vilDlEha~-------------~~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~~~di~~~LdaGa~g 120 (339)
T 1izc_A 54 FVTKVLAATKPDFVWIDVEHGM-------------FNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEVSLSTALDAGAAG 120 (339)
T ss_dssp HHHHHHHHTCCSEEEEETTTSC-------------CCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHHHHHHHHHHTCSE
T ss_pred HHHHHHHhCCCCEEEEECCCCC-------------CcHHHHHHHHHHhhhcCCCCCeEEEEeCCCCHHHHHHHHhCCCCE
Confidence 4456677788887776 4533 24455555566553221 1134556 89999
Q ss_pred ccccCCCCHHHHhhhh---c-CC----------------------------------------------CCCHHHHHhC-
Q 037554 73 SFVEAPRNDNEANWVW---G-HT----------------------------------------------LHTPEELKAM- 101 (173)
Q Consensus 73 ifv~g~~~~e~i~~i~---g-~p----------------------------------------------~~~~~eL~~l- 101 (173)
|++|-+.+.++++++. . .| ...++++...
T Consensus 121 ImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa~~ 200 (339)
T 1izc_A 121 IVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAAMP 200 (339)
T ss_dssp EEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHTCT
T ss_pred EEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhcCC
Confidence 9999999999998871 1 11 0157787764
Q ss_pred CccEEEechHHHHHH--------H---------HHHHHHHHHHHHcCCcc
Q 037554 102 GFHLTVHPLTALYAS--------A---------RALVDVLKTLKESGTTR 134 (173)
Q Consensus 102 Gv~~v~~~~~~~~aa--------~---------~a~~~~~~~l~~~g~~~ 134 (173)
|+..+++|+.=+... + .++.+.....+..|...
T Consensus 201 ~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~ 250 (339)
T 1izc_A 201 EIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPI 250 (339)
T ss_dssp TCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCce
Confidence 899999997755554 2 45566666667777643
No 175
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=51.00 E-value=39 Score=26.16 Aligned_cols=85 Identities=14% Similarity=0.034 Sum_probs=52.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++.+....++.+.+.|+.-|.|-+... +..+. |+..++.. ++++| +
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~k~~-------------~~~~~---i~~l~~~~--~~~~vgagtvi~~d~~~~A~~a 87 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTLRTE-------------CAVDA---IRAIAKEV--PEAIVGAGTVLNPQQLAEVTEA 87 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEESCST-------------THHHH---HHHHHHHC--TTSEEEEESCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCh-------------hHHHH---HHHHHHHC--cCCEEeeCEEEEHHHHHHHHHc
Confidence 456788899999999999999987541 12333 34333322 23333 9
Q ss_pred cCCcccccCCCCHHHHhhhh--cCC----CCCHHH---HHhCCccEEEe
Q 037554 69 RADASFVEAPRNDNEANWVW--GHT----LHTPEE---LKAMGFHLTVH 108 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i~--g~p----~~~~~e---L~~lGv~~v~~ 108 (173)
|||.|..|+ .+.+-++... |.| ..|++| ..++|++.+-+
T Consensus 88 GAd~v~~p~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 88 GAQFAISPG-LTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp TCSCEEESS-CCHHHHHHHHHSSSCEEEEESSHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEcCC-CCHHHHHHHHHhCCCEEEecCCHHHHHHHHHCCCCEEEE
Confidence 999988764 4554444332 322 244444 45679998866
No 176
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=50.87 E-value=7.4 Score=31.60 Aligned_cols=26 Identities=4% Similarity=-0.153 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHHhC-ceEEEeccCC
Q 037554 5 NALNVQRTVKDLVAAG-AAGCFLEDQS 30 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aG-vagi~iEDq~ 30 (173)
+..++.+.++.++++| |.+|.+-+..
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 3456777899999999 9999877644
No 177
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=50.82 E-value=31 Score=28.06 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=69.4
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCCcccc
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARADASFV 75 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD~ifv 75 (173)
+.++....+|+..|.|.=+-.| .+.+.+..-++++ +.. +...+| +|+|.|++
T Consensus 51 ~~~e~a~~~GaD~v~lDlEh~~-----------~~~~~~~~~l~a~-~~~-~~~~~VRv~~~d~~di~~~ld~ga~~Iml 117 (287)
T 2v5j_A 51 YSAELLAGAGFDWLLIDGEHAP-----------NNVQTVLTQLQAI-APY-PSQPVVRPSWNDPVQIKQLLDVGTQTLLV 117 (287)
T ss_dssp HHHHHHHTSCCSEEEEESSSSS-----------CCHHHHHHHHHHH-TTS-SSEEEEECSSSCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCCCEEEEeCCCcc-----------chHHHHHHHHHHH-Hhc-CCCEEEEECCCCHHHHHHHHhCCCCEEEe
Confidence 4556677788887766322222 2344444444433 222 334555 89999999
Q ss_pred cCCCCHHHHhhh-h--c-CC-----------------------------------------CCCHHHHHhC-CccEEEec
Q 037554 76 EAPRNDNEANWV-W--G-HT-----------------------------------------LHTPEELKAM-GFHLTVHP 109 (173)
Q Consensus 76 ~g~~~~e~i~~i-~--g-~p-----------------------------------------~~~~~eL~~l-Gv~~v~~~ 109 (173)
|-+++.++++++ . . .| ...++++.+. |+..+++|
T Consensus 118 P~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG 197 (287)
T 2v5j_A 118 PMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIG 197 (287)
T ss_dssp SCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEEC
T ss_pred CCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEEC
Confidence 999999998877 1 0 11 0267888765 89999999
Q ss_pred hHHHHHH------------HHHHHHHHHHHHHcCCccc
Q 037554 110 LTALYAS------------ARALVDVLKTLKESGTTRD 135 (173)
Q Consensus 110 ~~~~~aa------------~~a~~~~~~~l~~~g~~~~ 135 (173)
+.=+.+. ..++.+.....++.|....
T Consensus 198 ~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~g 235 (287)
T 2v5j_A 198 PADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPG 235 (287)
T ss_dssp HHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeE
Confidence 7654432 3445566666677776543
No 178
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=50.80 E-value=13 Score=30.31 Aligned_cols=64 Identities=14% Similarity=0.057 Sum_probs=46.3
Q ss_pred HHHHHHHhCceEEEecc-CCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------------e
Q 037554 12 TVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------------A 68 (173)
Q Consensus 12 tv~~~~~aGvagi~iED-q~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------------A 68 (173)
+.+.++++|..+|-+-+ ++.- ..|+.. ..+++.+||+..+++++++..- .+++ +
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~-~~G~pD-~~~vt~~em~~~~~~I~~~~~~-pviaD~d~Gyg~~~~~~~~~v~~l~~a 104 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAH-ARGRTD-GQTLTRDEMGREVEAIVRAVAI-PVNADIEAGYGHAPEDVRRTVEHFAAL 104 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHH-HSCCCS-SSSSCHHHHHHHHHHHHHHCSS-CEEEECTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECcHHHHH-hCCCCC-CCCCCHHHHHHHHHHHHhhcCC-CEEeecCCCCCCCHHHHHHHHHHHHHc
Confidence 45677889999999994 5542 344433 3589999999999999988652 2333 7
Q ss_pred cCCcccccCC
Q 037554 69 RADASFVEAP 78 (173)
Q Consensus 69 GAD~ifv~g~ 78 (173)
||++|-+++-
T Consensus 105 Gaagv~iED~ 114 (275)
T 2ze3_A 105 GVAGVNLEDA 114 (275)
T ss_dssp TCSEEEEECB
T ss_pred CCcEEEECCC
Confidence 8888888764
No 179
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=50.69 E-value=1e+02 Score=25.21 Aligned_cols=22 Identities=23% Similarity=-0.038 Sum_probs=16.7
Q ss_pred HHHHHhCCccEEEechHHHHHH
Q 037554 95 PEELKAMGFHLTVHPLTALYAS 116 (173)
Q Consensus 95 ~~eL~~lGv~~v~~~~~~~~aa 116 (173)
+.+.-.+|.+.|.+|...++..
T Consensus 266 ~~k~l~~GAd~V~iG~~~l~~~ 287 (349)
T 1p0k_A 266 VAKAIALGASCTGMAGHFLKAL 287 (349)
T ss_dssp HHHHHHTTCSEEEECHHHHHHH
T ss_pred HHHHHHcCCCEEEEcHHHHHHH
Confidence 4444458999999998887763
No 180
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=49.92 E-value=89 Score=24.32 Aligned_cols=48 Identities=10% Similarity=-0.122 Sum_probs=29.8
Q ss_pred ecCCcccccCCCCHHHHhhhh---cCC--------CCC-------HHHHHhCCccEEEechHHHHH
Q 037554 68 ARADASFVEAPRNDNEANWVW---GHT--------LHT-------PEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i~---g~p--------~~~-------~~eL~~lGv~~v~~~~~~~~a 115 (173)
+|||.|.+....+.+.++++. ..| ..+ +.++.+.|++-|..+..++.+
T Consensus 178 ~Gad~i~~~~~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~ 243 (273)
T 2qjg_A 178 LGADIVKTSYTGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQH 243 (273)
T ss_dssp TTCSEEEECCCSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTS
T ss_pred cCCCEEEECCCCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCC
Confidence 577776664334666666661 122 124 555568899999998877643
No 181
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=49.89 E-value=30 Score=28.59 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=14.4
Q ss_pred HHHHHHHHhCceEEEe
Q 037554 11 RTVKDLVAAGAAGCFL 26 (173)
Q Consensus 11 rtv~~~~~aGvagi~i 26 (173)
+.++.++++||.+|.+
T Consensus 161 e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 161 EAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 6788999999999998
No 182
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=49.75 E-value=14 Score=32.48 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHhCceEEEe-ccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc-CCCCEEE----------ecCCccc
Q 037554 7 LNVQRTVKDLVAAGAAGCFL-EDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI-GDSDFVL----------ARADASF 74 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~i-EDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~-~~~d~~I----------AGAD~if 74 (173)
.+..+..+.|++. |+||.+ -|..+ +.| .+ +....||.+++-- -..||++ +|||+|.
T Consensus 68 ~~~~~iA~~y~~~-A~~IsvLTd~~~------F~g-s~----~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~IL 135 (452)
T 1pii_A 68 FDPARIAAIYKHY-ASAISVLTDEKY------FQG-SF----NFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACL 135 (452)
T ss_dssp CCHHHHHHHHTTT-CSEEEEECCSTT------TCC-CT----THHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHhh-CcEEEEEecccc------cCC-CH----HHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEE
Confidence 4677888999998 999987 44432 122 11 3444455443210 0135555 9999998
Q ss_pred ccC-CCCHHHHhhh-----h-c-CC---CCCHHHHH---hCCccEEEech
Q 037554 75 VEA-PRNDNEANWV-----W-G-HT---LHTPEELK---AMGFHLTVHPL 110 (173)
Q Consensus 75 v~g-~~~~e~i~~i-----~-g-~p---~~~~~eL~---~lGv~~v~~~~ 110 (173)
+.. ..+.+++..+ + | .+ ..+.+|+. ++|.++|..-+
T Consensus 136 Li~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinn 185 (452)
T 1pii_A 136 LMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINN 185 (452)
T ss_dssp EETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEES
T ss_pred EEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeC
Confidence 754 3566777777 2 4 23 36777764 68999888764
No 183
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=49.21 E-value=1.1e+02 Score=25.21 Aligned_cols=20 Identities=15% Similarity=0.046 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhCceEEEec
Q 037554 8 NVQRTVKDLVAAGAAGCFLE 27 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iE 27 (173)
...+..++..++|..||.|-
T Consensus 145 ~f~~aA~~a~~aGfDgVEih 164 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIH 164 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEc
Confidence 34455667778999999886
No 184
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=49.09 E-value=1.1e+02 Score=26.59 Aligned_cols=125 Identities=11% Similarity=0.029 Sum_probs=80.3
Q ss_pred ChHHHHHHHHHHHHhCceEE----EeccCCC---------------------CccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 5 NALNVQRTVKDLVAAGAAGC----FLEDQSW---------------------PKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi----~iEDq~~---------------------pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
++.+.++.+.++...|+.=| ++-||.+ .++++|..+-. -+.+||.+|-+-+++.
T Consensus 175 s~~~~a~~~ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-~~~~em~~Ra~~a~e~ 253 (432)
T 3nwr_A 175 SAAETAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNIT-DDLDAMRRHAELVERE 253 (432)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecC-CCHHHHHHHHHHHHHc
Confidence 67889999999999888766 4555543 23444443333 5789999998888775
Q ss_pred cCCCCEEE--------------------------------------------------ecCCcccccCC-----CCHHHH
Q 037554 60 IGDSDFVL--------------------------------------------------ARADASFVEAP-----RNDNEA 84 (173)
Q Consensus 60 ~~~~d~~I--------------------------------------------------AGAD~ifv~g~-----~~~e~i 84 (173)
-. +-++| +|||.|-++++ .+.+++
T Consensus 254 G~-~~~mvd~~~~G~~a~~~l~r~~~~~lh~HrA~hga~~r~~~~Gi~~~vl~Kl~RlaG~D~ih~gt~~GK~~e~~~~~ 332 (432)
T 3nwr_A 254 GG-SCVMASINWCGFSAIQSLRRTTPLVLHAHRNGYGMMSRDPALGMSFQAYQTLWRLSGVDHMHVHGLAGKFAQSDAEV 332 (432)
T ss_dssp TC-CEEEEEHHHHCHHHHHHHHHHCCSEEEEECTTTTTTTSSTTEEECHHHHHHHHHTBTCSEEEEECTTCSSSCCHHHH
T ss_pred CC-CEEEEeccCCCHHHHHHHHhcCCceEEECcCcccccccCCCCCcCHHHHHHHHHHcCCCeeecCCCcCCcCCCcHHH
Confidence 32 22222 99999987765 345555
Q ss_pred hhh-------h-c-CC-------------CCCHHHHHhCC-ccEEEec-------hHHHHHHHHHHHHHHHHHHHcC
Q 037554 85 NWV-------W-G-HT-------------LHTPEELKAMG-FHLTVHP-------LTALYASARALVDVLKTLKESG 131 (173)
Q Consensus 85 ~~i-------~-g-~p-------------~~~~~eL~~lG-v~~v~~~-------~~~~~aa~~a~~~~~~~l~~~g 131 (173)
... + . .| ..-.+-+..+| -+.|... +....+-..|++++++...+.-
T Consensus 333 ~~~~~~~~~~~~~~k~~~v~PV~SGGih~~~~p~l~~~~G~~Dvvl~~GGG~~gHP~G~aaGa~A~R~A~eA~~~G~ 409 (432)
T 3nwr_A 333 IESARDCATPLAAGCDDAVLPAFSSGQWAGTVQATFDAVRSTDLLFMSGGGILAHPDGPAAGVTSVRQAWAAVQAGT 409 (432)
T ss_dssp HHHHHHHHSCSSTTCCCCCEEEECSSCSGGGHHHHHHHHSSSCSEEECSHHHHTCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCchhcCCCCceEeeecCCCCHHHHHHHHHHhCCCcEEEEcCCccccCCCChHHHHHHHHHHHHHHHcCC
Confidence 444 1 1 22 12246778888 5666552 2233577888999999988743
No 185
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=48.56 E-value=19 Score=31.20 Aligned_cols=24 Identities=8% Similarity=0.200 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhCceEEEeccCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~ 30 (173)
.++...++.++++||.||.+--.+
T Consensus 283 ~~i~~iA~~a~~aGaDgIiv~Ntt 306 (415)
T 3i65_A 283 EQKKEIADVLLETNIDGMIISNTT 306 (415)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCB
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCC
Confidence 468889999999999999987654
No 186
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=48.41 E-value=33 Score=27.65 Aligned_cols=24 Identities=13% Similarity=0.036 Sum_probs=19.1
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEe
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~i 26 (173)
||-+.....+.++.+.++ |.+|-|
T Consensus 25 GdP~~~~~~~~~~~l~~~-aD~IEl 48 (271)
T 1ujp_A 25 GFPSREGFLQAVEEVLPY-ADLLEI 48 (271)
T ss_dssp TSSCHHHHHHHHHHHGGG-CSSEEE
T ss_pred CCCChHHHHHHHHHHHhc-CCEEEE
Confidence 555556677788999999 999988
No 187
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=48.25 E-value=51 Score=26.70 Aligned_cols=41 Identities=22% Similarity=0.238 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
.+.+-++...+.|...|-|-|.+.. +|.++-++-|+.+.+.
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~-----------l~~~~~~~~I~~~~~~ 126 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSD-----------ISLEERNNAIKRAKDN 126 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSC-----------CCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc-----------CCHHHHHHHHHHHHHC
Confidence 3445567777788888888887652 5677777666666554
No 188
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=47.87 E-value=57 Score=25.46 Aligned_cols=85 Identities=15% Similarity=0.091 Sum_probs=51.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE----------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL----------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I----------------A 68 (173)
++.+....++.+.+.|+--|.|-.... +..++ |+..++.. +++.| +
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~~-------------~~~~~---i~~l~~~~--~~~~igagtvl~~d~~~~A~~a 97 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRSQ-------------HGLKA---IQVLREQR--PELCVGAGTVLDRSMFAAVEAA 97 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSST-------------HHHHH---HHHHHHHC--TTSEEEEECCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCc-------------cHHHH---HHHHHHhC--cccEEeeCeEeeHHHHHHHHHC
Confidence 356678889999999999999876431 12233 44333332 23444 9
Q ss_pred cCCcccccCCCCHHHHhhhh--cCC----CCCHHH---HHhCCccEEEe
Q 037554 69 RADASFVEAPRNDNEANWVW--GHT----LHTPEE---LKAMGFHLTVH 108 (173)
Q Consensus 69 GAD~ifv~g~~~~e~i~~i~--g~p----~~~~~e---L~~lGv~~v~~ 108 (173)
|||.|..|+ .+.+-++.-. |.| ..|++| ..++|++.|-+
T Consensus 98 GAd~v~~p~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 98 GAQFVVTPG-ITEDILEAGVDSEIPLLPGISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp TCSSEECSS-CCHHHHHHHHHCSSCEECEECSHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEeCC-CCHHHHHHHHHhCCCEEEeeCCHHHHHHHHHCCCCEEEE
Confidence 999998875 4554433332 322 244444 55679998866
No 189
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=47.85 E-value=18 Score=29.21 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=36.3
Q ss_pred HHHHHHHhCceEEEecc-CCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 12 TVKDLVAAGAAGCFLED-QSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 12 tv~~~~~aGvagi~iED-q~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
+.+.++++|+.+|-+-| ++.- ..|+.. ...++.+||+..+++++++..
T Consensus 32 sA~~~~~aG~dai~vg~~s~a~-~~G~pD-~~~vt~~em~~~~~~I~r~~~ 80 (255)
T 2qiw_A 32 SAGLVEEAGFSGLTIGSHPVAD-ATGSSD-GENMNFADYMAVVKKITSAVS 80 (255)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH-HTTCCT-TTCSCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHcCCCEEEEChHHHHH-hCCCCC-CCCcCHHHHHHHHHHHHhcCC
Confidence 45678889999999997 4432 344433 357999999999999988764
No 190
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=47.28 E-value=18 Score=29.01 Aligned_cols=27 Identities=26% Similarity=0.402 Sum_probs=21.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEe--ccCCC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFL--EDQSW 31 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~i--EDq~~ 31 (173)
+..+..+.+++++++|+.-+|+ -|..|
T Consensus 38 D~~~L~~~i~~l~~~G~d~lHvDVmDg~F 66 (246)
T 3inp_A 38 DLARLGDDVKAVLAAGADNIHFDVMDNHY 66 (246)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSS
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEecCCCc
Confidence 4467899999999999998887 46544
No 191
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=47.27 E-value=1e+02 Score=24.33 Aligned_cols=101 Identities=9% Similarity=-0.018 Sum_probs=56.2
Q ss_pred CCCChHHHHHHHHHHHHhCceEE----EeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEE-E---------
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGC----FLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFV-L--------- 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi----~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~-I--------- 67 (173)
||-++....+.++...++|++++ .+-|.- ..+-..++.+...+.... .+-.++ +
T Consensus 74 ~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~----------~~~~e~~~~~~~a~~~~~--~g~~vi~~~~~~~~~a~ 141 (264)
T 1xm3_A 74 GASTAEEAVRIARLAKASGLCDMIKVEVIGCSR----------SLLPDPVETLKASEQLLE--EGFIVLPYTSDDVVLAR 141 (264)
T ss_dssp TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTT----------TCCBCHHHHHHHHHHHHH--TTCCEEEEECSCHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCc----------ccccchHHHHHHHHHHHC--CCeEEEEEcCCCHHHHH
Confidence 44566666677888888877766 222211 012233445444433221 122333 2
Q ss_pred ----ecCCccccc----C----CCCHHHHhhhh---cCCC---------CCHHHHHhCCccEEEechHHHH
Q 037554 68 ----ARADASFVE----A----PRNDNEANWVW---GHTL---------HTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 68 ----AGAD~ifv~----g----~~~~e~i~~i~---g~p~---------~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
+|+|.|..- | +.+.+.++++. ..|. -++.++.++|++-|+.++..++
T Consensus 142 ~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 142 KLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp HHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 789987441 2 22456666662 2342 2456777899999999988764
No 192
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=47.18 E-value=1e+02 Score=24.30 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHHHH-hCceEEEeccCCCCccCCCCC--CCc-ccCHHHHHHHHHHHHHhcCCCCEEE-------------
Q 037554 5 NALNVQRTVKDLVA-AGAAGCFLEDQSWPKKCGHMH--GKQ-IIPAEEHAAKIASARDAIGDSDFVL------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~-aGvagi~iEDq~~pKrcg~~~--g~~-l~~~ee~~~kI~Aa~~a~~~~d~~I------------- 67 (173)
++.+..+.++.+.+ +|+.+|.|. .. |.+.. +.. ..+++...+-|++++++. +..+++
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~--~~---~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~~~~~~~~~a 182 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELN--IS---CPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSPNVTDIVPIA 182 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEE--CC---SEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCSHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEe--CC---CCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCChHHHHHHH
Confidence 46778888888888 999999663 11 22211 111 225544455555555542 233333
Q ss_pred -----ecCCcccccC--------CCC---------------------HHHHhhhh---cCC------C---CCHHHHHhC
Q 037554 68 -----ARADASFVEA--------PRN---------------------DNEANWVW---GHT------L---HTPEELKAM 101 (173)
Q Consensus 68 -----AGAD~ifv~g--------~~~---------------------~e~i~~i~---g~p------~---~~~~eL~~l 101 (173)
+|+|.|-+.+ .++ .+.++++. ..| . -++.++-++
T Consensus 183 ~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~ 262 (311)
T 1ep3_A 183 KAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMA 262 (311)
T ss_dssp HHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHc
Confidence 8999988732 101 13344441 123 1 234555668
Q ss_pred CccEEEechHHHH
Q 037554 102 GFHLTVHPLTALY 114 (173)
Q Consensus 102 Gv~~v~~~~~~~~ 114 (173)
|.+.|.++..++.
T Consensus 263 GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 263 GASAVAVGTANFA 275 (311)
T ss_dssp TCSEEEECTHHHH
T ss_pred CCCEEEECHHHHc
Confidence 9999999988765
No 193
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=47.04 E-value=1.2e+02 Score=24.86 Aligned_cols=58 Identities=9% Similarity=0.023 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCceEEEeccCC-----------CCccCCCCCCCccc-CHHHHHHHHHHHHHhcCCCCEEE
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQS-----------WPKKCGHMHGKQII-PAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~-----------~pKrcg~~~g~~l~-~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
...+.+++..++|..||.|-=.. .+||.....|. +. ...-..+-|++++++. +..+.|
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs-lenr~r~~~eiv~avr~~v-~~pv~v 214 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS-PENRYRFLREIIDEVKQVW-DGPLFV 214 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHC-CSCEEE
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcc-hhhhHHHHHHHHHHHHHHc-CCcEEE
Confidence 45667788889999999875321 13343333332 21 2233455666666654 344444
No 194
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=46.89 E-value=18 Score=28.18 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCceEEEeccCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~ 30 (173)
.+..+.++.|+++|+..|++-|-.
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~ 58 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSID 58 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETT
T ss_pred CCHHHHHHHHHHcCCCEEEEEecC
Confidence 467889999999999999999864
No 195
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=46.45 E-value=62 Score=26.25 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=59.1
Q ss_pred HHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------ecCCcccccCC
Q 037554 12 TVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL-------------ARADASFVEAP 78 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I-------------AGAD~ifv~g~ 78 (173)
.|.+...+||.+|.|-=.. ++.++..+-++.++.- +-+.++ +|+|.|=+...
T Consensus 134 qi~ea~~~GAD~VlLi~a~-------------L~~~~l~~l~~~a~~l--Gl~~lvevh~~eEl~~A~~~ga~iIGinnr 198 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMAS-------------VDDDLAKELEDTAFAL--GMDALIEVHDEAEMERALKLSSRLLGVNNR 198 (272)
T ss_dssp HHHHHHHTTCSEEEEETTT-------------SCHHHHHHHHHHHHHT--TCEEEEEECSHHHHHHHTTSCCSEEEEECB
T ss_pred HHHHHHHcCCCEEEEcccc-------------cCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCCEEEECCC
Confidence 3566778999999885432 3444555445555542 455555 89998876532
Q ss_pred C------CHHHHhhh----h-cCC------CCC---HHHHHhCCccEEEechHHHHHHHHHHHHHHHHHH
Q 037554 79 R------NDNEANWV----W-GHT------LHT---PEELKAMGFHLTVHPLTALYASARALVDVLKTLK 128 (173)
Q Consensus 79 ~------~~e~i~~i----~-g~p------~~~---~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~ 128 (173)
. |.+...++ . +.| ..| +.++.++|+.-|..|.+++++.- ....+++|.
T Consensus 199 ~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d--~~~~~~~l~ 266 (272)
T 3tsm_A 199 NLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHD--VAAATRALL 266 (272)
T ss_dssp CTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSC--HHHHHHHHH
T ss_pred CCccCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcC--HHHHHHHHH
Confidence 1 33434344 1 122 224 46677889999999999887632 233444444
No 196
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=46.28 E-value=39 Score=29.85 Aligned_cols=80 Identities=18% Similarity=0.156 Sum_probs=42.3
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCc---ccCHHHHHHHHHHHHHhcC-CCCEEEecCCcccccCCCCHHHHhh
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQ---IIPAEEHAAKIASARDAIG-DSDFVLARADASFVEAPRNDNEANW 86 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~---l~~~ee~~~kI~Aa~~a~~-~~d~~IAGAD~ifv~g~~~~e~i~~ 86 (173)
+.++.++++||.||.+- +|. |.+ -.+.-+++..|+.++..+. ..++ .+|.--|+++.+++.
T Consensus 355 e~A~~a~~aGad~I~vs--------~hg-G~~~d~~~~~~~~l~~v~~~v~~~~~~~~i-----pVia~GGI~~g~Dv~- 419 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLS--------NHG-GRQLDFSRAPIEVLAETMPILEQRNLKDKL-----EVFVDGGVRRGTDVL- 419 (511)
T ss_dssp HHHHHHHHTTCSEEEEC--------CTT-TTSSTTCCCHHHHHHHHHHHHHTTTCBTTB-----EEEEESSCCSHHHHH-
T ss_pred HHHHHHHHcCCCEEEEc--------CCC-CccCCCCCchHHHHHHHHHHHHhhccCCCc-----EEEEECCCCCHHHHH-
Confidence 45788899999999992 232 211 1234456666666654321 1122 123334555655552
Q ss_pred hhcCCCCCHHHHHhCCccEEEechHHHHH
Q 037554 87 VWGHTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 87 i~g~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
..-.+|.+.|.+|...+.+
T Consensus 420 ----------kaLalGAdaV~iGr~~l~~ 438 (511)
T 1kbi_A 420 ----------KALCLGAKGVGLGRPFLYA 438 (511)
T ss_dssp ----------HHHHHTCSEEEECHHHHHH
T ss_pred ----------HHHHcCCCEEEECHHHHHH
Confidence 2223666666666555543
No 197
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=46.15 E-value=28 Score=30.56 Aligned_cols=60 Identities=28% Similarity=0.302 Sum_probs=36.5
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE--------------e
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------A 68 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------A 68 (173)
.|...+..+.++.+.++|+..|.|.=. |+|. +...+.|+.+++.-.+..+++ +
T Consensus 226 vG~~~d~~~~a~~l~~aG~d~I~id~a-----~g~~--------~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~a 292 (496)
T 4fxs_A 226 VGAAPGNEERVKALVEAGVDVLLIDSS-----HGHS--------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA 292 (496)
T ss_dssp CCSSSCCHHHHHHHHHTTCSEEEEECS-----CTTS--------HHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHH
T ss_pred eccccchHHHHHHHHhccCceEEeccc-----cccc--------hHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHh
Confidence 343345577789999999999988622 2332 233444555554432333333 8
Q ss_pred cCCcccc
Q 037554 69 RADASFV 75 (173)
Q Consensus 69 GAD~ifv 75 (173)
|||+|.+
T Consensus 293 GaD~I~V 299 (496)
T 4fxs_A 293 GVSAVKV 299 (496)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999986
No 198
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=45.47 E-value=17 Score=30.85 Aligned_cols=17 Identities=12% Similarity=0.274 Sum_probs=14.3
Q ss_pred HHHHHHHHhCceEEEec
Q 037554 11 RTVKDLVAAGAAGCFLE 27 (173)
Q Consensus 11 rtv~~~~~aGvagi~iE 27 (173)
+.++.++++||.+|.+-
T Consensus 221 e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 56788899999999874
No 199
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=45.43 E-value=72 Score=26.63 Aligned_cols=22 Identities=23% Similarity=0.276 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhCceEEEeccCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~ 30 (173)
+.+.++..+++||.+|.|-|+.
T Consensus 199 ~~~y~~~qi~aGad~i~ifDs~ 220 (368)
T 4exq_A 199 VAAYLNAQIEAGAQAVMIFDTW 220 (368)
T ss_dssp HHHHHHHHHHHTCSEEEEEETT
T ss_pred HHHHHHHHHHhCCCEEEEeCCc
Confidence 3455567789999999998864
No 200
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=45.40 E-value=1.1e+02 Score=24.69 Aligned_cols=22 Identities=27% Similarity=0.211 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhCceEEEeccCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~ 30 (173)
+.+.++.++++|+.+|.|-|..
T Consensus 181 ~~~~~~~~~~aGad~i~i~d~~ 202 (338)
T 2eja_A 181 VLAYLKEQIKAGADVVQIFDSW 202 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEETT
T ss_pred HHHHHHHHHHhCCCEEEEecCc
Confidence 3445567789999999999974
No 201
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=44.99 E-value=46 Score=27.64 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=38.0
Q ss_pred CChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
+++..+.+.++++.++|..+|-| ++|| +++...++|+++|++.. +..+.|
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~g~d~~l~v 194 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQI-------KVGA-------DWQSDIDRIRACLPLLEPGEKAMA 194 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEE-------ECCS-------CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE-------eccC-------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 46778889999999999999987 3444 56888899999988764 333444
No 202
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=44.95 E-value=17 Score=29.70 Aligned_cols=44 Identities=9% Similarity=-0.044 Sum_probs=30.4
Q ss_pred ecCCcccccCCC-----CHHHHhhh-h---cC-------------CCCCHHHHHhCCccEEEechH
Q 037554 68 ARADASFVEAPR-----NDNEANWV-W---GH-------------TLHTPEELKAMGFHLTVHPLT 111 (173)
Q Consensus 68 AGAD~ifv~g~~-----~~e~i~~i-~---g~-------------p~~~~~eL~~lGv~~v~~~~~ 111 (173)
+|||+|.+-.++ |.+.++++ + +. |.-.+++|.++||+||.....
T Consensus 85 ~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~ 150 (256)
T 1twd_A 85 LGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQ 150 (256)
T ss_dssp TTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTT
T ss_pred cCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC
Confidence 899998775443 56667776 1 11 223578999999999997644
No 203
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=44.15 E-value=52 Score=27.01 Aligned_cols=53 Identities=15% Similarity=0.142 Sum_probs=38.7
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
|++++..+.+.++++.++|..+|-| ++|| -+++...++|++++++.. +.++.|
T Consensus 141 g~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~------~~~~~~~e~v~avr~a~g~~~~l~v 194 (359)
T 1mdl_A 141 SLDGVKLATERAVTAAELGFRAVKT-------RIGY------PALDQDLAVVRSIRQAVGDDFGIMV 194 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEE-------ECCC------SSHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE-------ecCC------CCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4456777888899999999999987 2344 145778899999998874 334444
No 204
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=43.93 E-value=34 Score=27.98 Aligned_cols=76 Identities=13% Similarity=0.195 Sum_probs=47.9
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE-------------
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL------------- 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I------------- 67 (173)
|.++..+.+.++++++.||.=|-|-=+ +.| |..-++.+|=.+|+.-+.++.. ..++.|
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrP-------ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aA 106 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRP-------GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRES 106 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCST-------TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHH
Confidence 345677888899999999998877653 323 3345666666666655555432 224444
Q ss_pred --ecCCccc-ccCCCCHHHHh
Q 037554 68 --ARADASF-VEAPRNDNEAN 85 (173)
Q Consensus 68 --AGAD~if-v~g~~~~e~i~ 85 (173)
+|||+|- +.+..+++-+.
T Consensus 107 l~aGa~iINdvsg~~d~~~~~ 127 (282)
T 1aj0_A 107 AKVGAHIINDIRSLSEPGALE 127 (282)
T ss_dssp HHTTCCEEEETTTTCSTTHHH
T ss_pred HHcCCCEEEECCCCCCHHHHH
Confidence 8999987 44444444443
No 205
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=43.88 E-value=1.1e+02 Score=24.53 Aligned_cols=67 Identities=12% Similarity=0.091 Sum_probs=46.3
Q ss_pred HHHHHHhcCCCCEEEecCCcccccCCCCHHHHhhhhcCCCCCHHHHHhCCccEEEechHHHHH-HHHHHHH
Q 037554 53 IASARDAIGDSDFVLARADASFVEAPRNDNEANWVWGHTLHTPEELKAMGFHLTVHPLTALYA-SARALVD 122 (173)
Q Consensus 53 I~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i~g~p~~~~~eL~~lGv~~v~~~~~~~~a-a~~a~~~ 122 (173)
++++++...+.+++-.|=..-++-|.++.+++.++. .-..+.|.+.|++.+.++.....+ ++..+++
T Consensus 21 ~~~i~~~lP~~~~iy~~D~a~~PYG~ks~~~i~~~~---~~~~~~L~~~g~~~IVIACNTa~~~al~~lr~ 88 (269)
T 3ist_A 21 VREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFT---WEMTNFLVDRGIKMLVIACNTATAAALYDIRE 88 (269)
T ss_dssp HHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHH---HHHHHHHHHTTCSEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcEEEEeCCCCCCCCCCCHHHHHHHH---HHHHHHHHHCCCCEEEEeCCCccHHHHHHHHH
Confidence 355555555667765666666677889999998772 113567888899999998877776 3555543
No 206
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=43.63 E-value=99 Score=25.20 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhCceEEEeccCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~ 30 (173)
+.+.++.++++|+.+|.|-|..
T Consensus 195 ~~~~~~~~~~aGad~iqi~D~~ 216 (353)
T 1j93_A 195 MAKYIRYQADSGAQAVQIFDSW 216 (353)
T ss_dssp HHHHHHHHHHTTCSEEEEECGG
T ss_pred HHHHHHHHHHhCCCEEEEeCcc
Confidence 3445677789999999999874
No 207
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=43.42 E-value=76 Score=26.01 Aligned_cols=70 Identities=20% Similarity=0.268 Sum_probs=47.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL-------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I-------------A 68 (173)
+...+.+.++++++.||.=|-|-=+ +.| |-+-+|.+|-.+|+.-++++.. +..+.| +
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeSTrP-------ga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~a 116 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGESTRP-------GAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAA 116 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCCST-------TCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHc
Confidence 5677888899999999998866542 223 4455777888887776666643 334555 8
Q ss_pred cCCccc-ccCCCCH
Q 037554 69 RADASF-VEAPRND 81 (173)
Q Consensus 69 GAD~if-v~g~~~~ 81 (173)
|||+|- |.+.+++
T Consensus 117 Ga~iINdVsg~~d~ 130 (294)
T 2y5s_A 117 GADLINDIWGFRQP 130 (294)
T ss_dssp TCSEEEETTTTCST
T ss_pred CCCEEEECCCCCch
Confidence 999986 4444433
No 208
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=42.87 E-value=36 Score=28.80 Aligned_cols=80 Identities=9% Similarity=-0.039 Sum_probs=52.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE---------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL--------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I--------------- 67 (173)
+...+.+.++.+..+|+.-|+|=+.+++-.+-+ +-=.++++..++++.+++... ..++.+
T Consensus 85 ~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~---~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~ 161 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIHTFIATSPIHMEY---KLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAE 161 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHH---TTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHH---HhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHH
Confidence 445667777777779999999999887532211 112478899998877665543 233333
Q ss_pred -------ecCCccccc---CCCCHHHHhhh
Q 037554 68 -------ARADASFVE---APRNDNEANWV 87 (173)
Q Consensus 68 -------AGAD~ifv~---g~~~~e~i~~i 87 (173)
+|||.|.++ |..++.++.++
T Consensus 162 ~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~l 191 (370)
T 3rmj_A 162 ICGAVIEAGATTINIPDTVGYSIPYKTEEF 191 (370)
T ss_dssp HHHHHHHHTCCEEEEECSSSCCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCccCCcCHHHHHHH
Confidence 888887763 34577776655
No 209
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=42.81 E-value=68 Score=26.41 Aligned_cols=46 Identities=17% Similarity=0.352 Sum_probs=36.0
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG 61 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~ 61 (173)
|.+++..+.+.++++.+.|-.+|-| ++|| +++...++|++++++..
T Consensus 138 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~g 183 (369)
T 2p8b_A 138 SIADPENMAEEAASMIQKGYQSFKM-------KVGT-------NVKEDVKRIEAVRERVG 183 (369)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEE-------ECCS-------CHHHHHHHHHHHHHHHC
T ss_pred cCCChHHHHHHHHHHHHcCcCEEEE-------EeCC-------CHHHHHHHHHHHHHHhC
Confidence 3457788889999999999999887 2333 47888899999998863
No 210
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=42.57 E-value=38 Score=28.66 Aligned_cols=55 Identities=29% Similarity=0.337 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE--------------ecCCcc
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------ARADAS 73 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------AGAD~i 73 (173)
+..+.++.+.++|+..|+|. .. | + +.+...+.|+.+++.-.+..+++ +|||.|
T Consensus 108 ~~~~~~~~lieaGvd~I~id-ta------~--G----~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I 174 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLID-SS------H--G----HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAV 174 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEE-CS------C--T----TSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEE
T ss_pred hHHHHHHHHHhCCCCEEEEe-CC------C--C----CCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEE
Confidence 45677889999999999884 11 1 1 11456666676666542222222 899999
Q ss_pred cc
Q 037554 74 FV 75 (173)
Q Consensus 74 fv 75 (173)
.+
T Consensus 175 ~v 176 (366)
T 4fo4_A 175 KV 176 (366)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 211
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=42.37 E-value=8.7 Score=30.66 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=22.2
Q ss_pred ChHHHHHHHHHHHHhCceEEEec--cCCC
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE--DQSW 31 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE--Dq~~ 31 (173)
+..+..+.++.++++|+.-+|+. |..+
T Consensus 24 D~~~l~~~i~~~~~~gad~lhvDvmDG~f 52 (237)
T 3cu2_A 24 NWLQLNEEVTTLLENQINVLHFDIADGQF 52 (237)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSS
T ss_pred CcccHHHHHHHHHHcCCCEEEEEEecCcc
Confidence 45678889999999999999887 6544
No 212
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=42.13 E-value=15 Score=29.42 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=15.9
Q ss_pred CCCChHHHHHHHHHHHHhC
Q 037554 2 GGGNALNVQRTVKDLVAAG 20 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aG 20 (173)
+||+-.++.+.|+.+.+.|
T Consensus 133 ~YggR~EI~~A~~~iv~~g 151 (225)
T 3ugs_B 133 SYGARDEIIRAAKRVIEKK 151 (225)
T ss_dssp EECHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHhc
Confidence 5888888999999997776
No 213
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=41.76 E-value=20 Score=28.61 Aligned_cols=58 Identities=16% Similarity=0.194 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAPR 79 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~~ 79 (173)
-.+.++.+.++|+..|-|-=+ .|-.+-...+++++|| + .+..+++ +|+|++++|.+.
T Consensus 22 t~~~~~~l~~~GaD~IelG~S---------~g~t~~~~~~~v~~ir---~--~~~Pivl~~y~~n~i~~gvDg~iipdLp 87 (234)
T 2f6u_A 22 TDEIIKAVADSGTDAVMISGT---------QNVTYEKARTLIEKVS---Q--YGLPIVVEPSDPSNVVYDVDYLFVPTVL 87 (234)
T ss_dssp CHHHHHHHHTTTCSEEEECCC---------TTCCHHHHHHHHHHHT---T--SCCCEEECCSSCCCCCCCSSEEEEEEET
T ss_pred cHHHHHHHHHcCCCEEEECCC---------CCCCHHHHHHHHHHhc---C--CCCCEEEecCCcchhhcCCCEEEEcccC
Confidence 345688999999999887432 2323333445555554 3 2444555 999999998874
Q ss_pred C
Q 037554 80 N 80 (173)
Q Consensus 80 ~ 80 (173)
.
T Consensus 88 ~ 88 (234)
T 2f6u_A 88 N 88 (234)
T ss_dssp T
T ss_pred C
Confidence 3
No 214
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=41.70 E-value=1.2e+02 Score=26.28 Aligned_cols=128 Identities=15% Similarity=0.097 Sum_probs=79.8
Q ss_pred ChHHHHHHHHHHHHhCceEE----EeccCCC---------------------CccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 5 NALNVQRTVKDLVAAGAAGC----FLEDQSW---------------------PKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi----~iEDq~~---------------------pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
+|.+.++.+.++...|+.=| ++-||.+ .++++|..+-. -+.+||.+|-+-+++.
T Consensus 154 s~~~~a~~~ye~~~GGlDfiKDDE~l~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-a~~~em~~ra~~a~e~ 232 (414)
T 3fk4_A 154 NIGYLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQSVYETYGHKTLYAVNLT-GRTFDLKENAKRAVQA 232 (414)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-SCGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCcCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEeEcC-CCHHHHHHHHHHHHHc
Confidence 67889999999999888765 3444432 12333332211 1447888888877764
Q ss_pred cC--------------------C--CCEEE------------------------------ecCCcccccCCC-----CHH
Q 037554 60 IG--------------------D--SDFVL------------------------------ARADASFVEAPR-----NDN 82 (173)
Q Consensus 60 ~~--------------------~--~d~~I------------------------------AGAD~ifv~g~~-----~~e 82 (173)
-. + +++.| +|||.|-++++- +.+
T Consensus 233 G~~~~mvd~~~~G~~a~~~l~r~~~~~~~lh~HrA~~ga~~r~~~~Gi~~~vll~Kl~RlaG~D~ih~gt~~GK~~~~~~ 312 (414)
T 3fk4_A 233 GADILLFNVFAYGLDVLQSLAEDDEIPVPIMAHPAVSGAYSASKLYGVSSPLLLGKLLRYAGADFSLFPSPYGSVALEKE 312 (414)
T ss_dssp TCSEEEECHHHHCHHHHHHHHHCTTSCSCEEECCTTTHHHHSCSSSSBCHHHHHTHHHHHHTCSEEEEECCC------CH
T ss_pred CCCEEEEcccccChHHHHHHHhcCCCCceEEeccCcccccccCCCCCccHHHHHHHHHHhhCCCccccCCccCCcCCCHH
Confidence 21 0 12222 899999887752 334
Q ss_pred HHhhh-------h-c------------CCCCCHHHHHhCCccEEEe-------chHHHHHHHHHHHHHHHHHHHcCCc
Q 037554 83 EANWV-------W-G------------HTLHTPEELKAMGFHLTVH-------PLTALYASARALVDVLKTLKESGTT 133 (173)
Q Consensus 83 ~i~~i-------~-g------------~p~~~~~eL~~lGv~~v~~-------~~~~~~aa~~a~~~~~~~l~~~g~~ 133 (173)
+...+ | + +|..-.+-+..+|-+.|.. ++....+-.++++++++...+.-+.
T Consensus 313 ~~~~~~~~~~q~w~~~~~~~PV~SGGih~~~~p~~~~~~G~D~vl~~GGG~~gHP~G~aaGa~A~R~A~eA~~~g~~l 390 (414)
T 3fk4_A 313 EALAISKYLTEDDASFKKSFSVPSAGIHPGFVPFIVRDFGKDVVINAGGGIHGHPNGAQGGGKAFRTAIDATLQNKPL 390 (414)
T ss_dssp HHHHHHHHHHSCCTTSCCCEEEEESSCCGGGHHHHHHHHCSSBEEECGGGGGGSTTHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCccccCCCceeecCCCCCHhHHHHHHHHhCCcEEEEcCCcccCCCCChHHHHHHHHHHHHHHhcCCCH
Confidence 44444 2 1 1223357788889887776 3555678889999999999876543
No 215
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=41.61 E-value=37 Score=29.70 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=19.0
Q ss_pred CChHHHHHHHHHHHHhCceEEEec
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLE 27 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iE 27 (173)
|...+..+.++.+.++|+..|.|.
T Consensus 225 G~~~~~~~~a~~l~~aG~d~I~id 248 (490)
T 4avf_A 225 GTGADTGERVAALVAAGVDVVVVD 248 (490)
T ss_dssp CSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred ccccchHHHHHHHhhcccceEEec
Confidence 433466788999999999999885
No 216
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=41.51 E-value=18 Score=30.62 Aligned_cols=47 Identities=19% Similarity=0.114 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCceEE-EeccCCCCccCCCCCCCcccCHHHHHHHHHHHH
Q 037554 9 VQRTVKDLVAAGAAGC-FLEDQSWPKKCGHMHGKQIIPAEEHAAKIASAR 57 (173)
Q Consensus 9 v~rtv~~~~~aGvagi-~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~ 57 (173)
..+..+.++++|+++| -|| ..|+-..+..|-.+++-.+++..|+.++
T Consensus 26 ~~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~G~arm~~p~~i~~I~~av 73 (330)
T 2yzr_A 26 NVEQAQIAEEAGAVAVMALE--RVPADIRAAGGVARMSDPALIEEIMDAV 73 (330)
T ss_dssp SHHHHHHHHHHTCSEEEECS--SCHHHHC--CCCCCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEecC--CccccccCCcchhhcCCHHHHHHHHHhc
Confidence 3567899999999999 444 3344333444533443345666666543
No 217
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=41.28 E-value=25 Score=29.38 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=40.6
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-C-CCEEE--------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-D-SDFVL-------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~-~d~~I-------------- 67 (173)
+...+.+.++++++.||.=|-|-=+ +.| | .-++.+|-.+|+.-++++.. . +++.|
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrP-------G-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl 134 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGP-------G-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAAC 134 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC------------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------C-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHH
Confidence 4567788889999999998876532 223 4 55787887777644443321 1 25545
Q ss_pred -ecCCccc-ccCCCCHHH
Q 037554 68 -ARADASF-VEAPRNDNE 83 (173)
Q Consensus 68 -AGAD~if-v~g~~~~e~ 83 (173)
+|||+|- |.+..+++-
T Consensus 135 ~aGa~iINDVsg~~d~~m 152 (318)
T 2vp8_A 135 AAGADLINDTWGGVDPAM 152 (318)
T ss_dssp HHTCCEEEETTSSSSTTH
T ss_pred HhCCCEEEECCCCCchHH
Confidence 8999876 444444433
No 218
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=41.06 E-value=1.5e+02 Score=27.79 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcc---cCHHHHHH-HHHHHHHhcC--CCCEEE--------------
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQI---IPAEEHAA-KIASARDAIG--DSDFVL-------------- 67 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l---~~~ee~~~-kI~Aa~~a~~--~~d~~I-------------- 67 (173)
-...-|+.|.++|+.=|+|.|-.+.. +-++ .+++++.+ -+++...+.. ..|+.|
T Consensus 617 A~r~Ei~~L~~AG~r~IQiDEPal~e------~l~~r~g~d~~~~l~~av~a~n~a~~g~p~d~~I~tHiC~Gnf~~~~I 690 (789)
T 3ppg_A 617 ALRDEVNDLEGAGITVIQVDEPAIRE------GLPLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLDPNHI 690 (789)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTTGG------GSCSSSSHHHHHHHHHHHHHHHHHHSSSCTTSEEEEECC---CCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcccchhh------cccccccCCHHHHHHHHHHHHHHHHhcCCCCcEEEEeccCCCCChhHH
Confidence 34567889999999999999976521 1112 23344333 2344444332 245555
Q ss_pred --ecCCccccc-CCCC-HHHHhhh-------h-c-----CC-CCCHHHHHh--------CCccEEE---------echHH
Q 037554 68 --ARADASFVE-APRN-DNEANWV-------W-G-----HT-LHTPEELKA--------MGFHLTV---------HPLTA 112 (173)
Q Consensus 68 --AGAD~ifv~-g~~~-~e~i~~i-------~-g-----~p-~~~~~eL~~--------lGv~~v~---------~~~~~ 112 (173)
+++|+++++ ..++ .+.++.+ . | +| ..+.+++.+ ++..++. .+...
T Consensus 691 ~~l~aD~islE~~~Rs~~e~L~~~~~~~k~V~lGVvds~sp~vEs~EeV~~rI~~a~~~v~~erL~lsPdCGl~t~~~~~ 770 (789)
T 3ppg_A 691 KALDADVVSIEFSKKDDPNYIQEFSEYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPE 770 (789)
T ss_dssp HHHCCSEEEEC---------CGGGGGCCSEEEEC-------CCCCHHHHHHHHHHHTTTSCGGGEEECCSCC---CCHHH
T ss_pred HhCCCCEEEEecCCCcchHHHHHHHhcCCeEEeeeecCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHH
Confidence 689999999 4333 2333333 0 2 23 345555443 2223222 24445
Q ss_pred HHHHHHHHHHHHHHHHH
Q 037554 113 LYASARALVDVLKTLKE 129 (173)
Q Consensus 113 ~~aa~~a~~~~~~~l~~ 129 (173)
.++++++|.++++.+++
T Consensus 771 a~akL~~mveaAk~lR~ 787 (789)
T 3ppg_A 771 VKESLTNMVEAAKEFRA 787 (789)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 67888888888887765
No 219
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=40.98 E-value=23 Score=28.23 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=29.2
Q ss_pred ecCCcccccCCC-----CHHHHhhh-h---cCC---------------CCCHHHHHhCCccEEEech
Q 037554 68 ARADASFVEAPR-----NDNEANWV-W---GHT---------------LHTPEELKAMGFHLTVHPL 110 (173)
Q Consensus 68 AGAD~ifv~g~~-----~~e~i~~i-~---g~p---------------~~~~~eL~~lGv~~v~~~~ 110 (173)
+|||+|.+-.++ |.+.++++ + +.| .-.+++|.++||+||....
T Consensus 88 ~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG 154 (224)
T 2bdq_A 88 LESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHG 154 (224)
T ss_dssp TTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECS
T ss_pred cCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCC
Confidence 789987764443 56667777 1 111 1247899999999999753
No 220
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=40.77 E-value=46 Score=27.37 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=32.3
Q ss_pred ecCCcccccCCCCHHHHhhh-h---c-CC--------CCCHHHHHhCCccEEEechH
Q 037554 68 ARADASFVEAPRNDNEANWV-W---G-HT--------LHTPEELKAMGFHLTVHPLT 111 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-~---g-~p--------~~~~~eL~~lGv~~v~~~~~ 111 (173)
+|||.|.+.. -++++++++ . + .| .-++.++.+.|+.+++.+..
T Consensus 227 aGaD~I~ld~-~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~GvD~isvGsl 282 (296)
T 1qap_A 227 AGADIIMLDN-FNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGAL 282 (296)
T ss_dssp TTCSEEEESS-CCHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTTCSEEECSHH
T ss_pred cCCCEEEECC-CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEEeHH
Confidence 8999999876 577877766 1 1 12 23668899999999999863
No 221
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=39.83 E-value=12 Score=28.98 Aligned_cols=68 Identities=16% Similarity=0.020 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCCc
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARADA 72 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD~ 72 (173)
+..+.++.++++|+..||+-|-.. +..+ ..+. +.+.+|+... +..+.+ +|||.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~-----~~~~--~~~~-~~i~~i~~~~----~ipv~v~ggi~~~~~~~~~l~~Gad~ 99 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDA-----AFGR--GSNH-ELLAEVVGKL----DVQVELSGGIRDDESLAAALATGCAR 99 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHH-----HTTS--CCCH-HHHHHHHHHC----SSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcc-----cccC--CChH-HHHHHHHHhc----CCcEEEECCCCCHHHHHHHHHcCCCE
Confidence 455677899999999999987432 1111 1233 5555554322 223333 89999
Q ss_pred ccccCC--CCHHHHhhh
Q 037554 73 SFVEAP--RNDNEANWV 87 (173)
Q Consensus 73 ifv~g~--~~~e~i~~i 87 (173)
|.+... .+++.+.++
T Consensus 100 V~lg~~~l~~p~~~~~~ 116 (244)
T 2y88_A 100 VNVGTAALENPQWCARV 116 (244)
T ss_dssp EEECHHHHHCHHHHHHH
T ss_pred EEECchHhhChHHHHHH
Confidence 887542 455555554
No 222
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=38.62 E-value=55 Score=26.82 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=39.4
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEEecCCcccccCCCCHHHHhhhhc
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVLARADASFVEAPRNDNEANWVWG 89 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~IAGAD~ifv~g~~~~e~i~~i~g 89 (173)
...++++++|+..| ++-..| -.+|+.+..+ ++ |+..++...+ ..+++ + -|+.+++++
T Consensus 136 ~~ak~l~~~G~~aV--mPlg~p----IGsG~Gi~~~-~~---L~~i~~~~~~~vPVI~-~------GGI~tpsDA----- 193 (268)
T 2htm_A 136 VLAKRLAALGTATV--MPLAAP----IGSGWGVRTR-AL---LELFAREKASLPPVVV-D------AGLGLPSHA----- 193 (268)
T ss_dssp HHHHHHHHHTCSCB--EEBSSS----TTTCCCSTTH-HH---HHHHHHTTTTSSCBEE-E------SCCCSHHHH-----
T ss_pred HHHHHHHhcCCCEE--EecCcc----CcCCcccCCH-HH---HHHHHHhcCCCCeEEE-e------CCCCCHHHH-----
Confidence 56677888888887 332211 1134455553 33 3444441212 23332 1 244555544
Q ss_pred CCCCCHHHHHhCCccEEEechHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
...-+||..-|..++...+
T Consensus 194 ------a~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 194 ------AEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp ------HHHHHTTCCEEEESHHHHT
T ss_pred ------HHHHHcCCCEEEEChHHhC
Confidence 4566778887777766554
No 223
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=38.35 E-value=43 Score=27.18 Aligned_cols=46 Identities=7% Similarity=0.120 Sum_probs=31.4
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcc-cCHHHHHHHHHHHHHhc
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQI-IPAEEHAAKIASARDAI 60 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l-~~~ee~~~kI~Aa~~a~ 60 (173)
+.+++..++|+..|+|-|.+.+- |.. +.+ .|.+|.+++++.+++..
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~---~~~-~~~~~s~ee~l~~~~~~v~~a 133 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEA---FSQ-RNINCSIKDSLERFVPVLEAA 133 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHH---HHH-HHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHH---HHH-HHhCCCHHHHHHHHHHHHHHH
Confidence 56778888999999998876531 000 112 47888888887777654
No 224
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=37.92 E-value=1.1e+02 Score=25.58 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=61.6
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE--------------
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL-------------- 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I-------------- 67 (173)
.+++..+.+.++++.+.|...|-|- +|. ++++-+++|+++|++.. +.++.|
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK-------~G~-------~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~ 208 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVK-------IGG-------DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRV 208 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEec-------cCC-------CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHH
Confidence 3467888999999999999998762 111 57888999999988763 344555
Q ss_pred ----ecCCcccccCC-CCHHHHhhhh---cCC------CCCHH---HHHhCC-ccEEEechHH
Q 037554 68 ----ARADASFVEAP-RNDNEANWVW---GHT------LHTPE---ELKAMG-FHLTVHPLTA 112 (173)
Q Consensus 68 ----AGAD~ifv~g~-~~~e~i~~i~---g~p------~~~~~---eL~~lG-v~~v~~~~~~ 112 (173)
...+. |++-+ .+.+.++++. ..| ..+.. ++.+.| ++.|..-..-
T Consensus 209 ~~~l~~~~i-~iEqP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 209 MRATEDLHV-MFEQPGETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp HHHTGGGTC-CEECCSSSHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred HHHhccCCe-EEecCCCCHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 45555 77654 4677777772 234 24443 344444 6766665443
No 225
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=37.82 E-value=68 Score=25.75 Aligned_cols=77 Identities=22% Similarity=0.162 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEEecCCcccccCCCCHHHHhh
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVLARADASFVEAPRNDNEANW 86 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~ 86 (173)
..|.+..+...++|+.|+- +|..| +.+||... +++|+ ++.||++... - .
T Consensus 162 ~~V~~~A~~a~~aG~~GvV------------------~sa~e-~~~iR~~~----g~~fl------~VtPGIr~qg-~-~ 210 (255)
T 3ldv_A 162 DHVLRLATLTKNAGLDGVV------------------CSAQE-ASLLKQHL----GREFK------LVTPGIRPAG-S-E 210 (255)
T ss_dssp HHHHHHHHHHHHTTCSEEE------------------CCHHH-HHHHHHHH----CTTSE------EEEECCCCTT-S-T
T ss_pred HHHHHHHHHHHHcCCCEEE------------------ECHHH-HHHHHHhc----CCCcE------EEeCCcccCc-C-C
Confidence 3455666666677887772 34333 44555432 34555 3447764210 0 0
Q ss_pred hhc--CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 87 VWG--HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 87 i~g--~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
. + .-..|+.+..+.|.+.+..|...+.+
T Consensus 211 ~-~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 211 Q-GDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp T-SSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred c-cceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 0 1 23578999999999999999877654
No 226
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=37.73 E-value=56 Score=30.01 Aligned_cols=52 Identities=10% Similarity=-0.004 Sum_probs=36.8
Q ss_pred ChHHHHHHHHHHHHhCce------EEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE
Q 037554 5 NALNVQRTVKDLVAAGAA------GCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGva------gi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I 67 (173)
++.-+.+.++.+.++|+. -|+|-|.++ +..+.++.+.|+..++...+ +++.|
T Consensus 224 d~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG-----------~~tP~~~~~li~~l~~~v~~~~~v~l 282 (644)
T 3hq1_A 224 ELEYAKQVCDAVGEVIAPTPERPIIFNLPATVE-----------MTTPNVYADSIEWMSRNLANRESVIL 282 (644)
T ss_dssp CHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSC-----------CSCHHHHHHHHHHHHHHSTTGGGEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCCceeEEEecCCCc-----------ccCHHHHHHHHHHHHHhcccccCceE
Confidence 456677888888887643 589999874 56678888888887776432 24445
No 227
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=37.70 E-value=1.5e+02 Score=23.35 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=17.2
Q ss_pred HHHHHHHHHhCceEEEeccC
Q 037554 10 QRTVKDLVAAGAAGCFLEDQ 29 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iEDq 29 (173)
.+.++...++|+.|+.+=|-
T Consensus 112 ~~f~~~~~~aG~dgvii~dl 131 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDL 131 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTC
T ss_pred HHHHHHHHHcCCCEEEECCC
Confidence 57788899999999999764
No 228
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=37.65 E-value=57 Score=25.30 Aligned_cols=70 Identities=17% Similarity=0.157 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------------ecCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------------ARAD 71 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------------AGAD 71 (173)
.+..+.++.++++|+..|++-|-... +...+ .. -+.+.+|+ +. .+..+++ +|||
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~---~~~~g---~~-~~~i~~i~---~~-~~iPvi~~ggi~~~~~i~~~~~~Gad 98 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRD---GTKSG---YD-TEMIRFVR---PL-TTLPIIASGGAGKMEHFLEAFLAGAD 98 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTS---SCSSC---CC-HHHHHHHG---GG-CCSCEEEESCCCSTHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcc---cCCCc---cc-HHHHHHHH---Hh-cCCCEEEECCCCCHHHHHHHHHcCCc
Confidence 35678899999999999999875432 11111 11 23444443 32 2345555 7999
Q ss_pred cccccCC---C--CHHHHhhh
Q 037554 72 ASFVEAP---R--NDNEANWV 87 (173)
Q Consensus 72 ~ifv~g~---~--~~e~i~~i 87 (173)
.|.+... . +++.++++
T Consensus 99 ~v~lg~~~~~~~~~~~~~~~~ 119 (266)
T 2w6r_A 99 KALAASVFHFREIDMRELKEY 119 (266)
T ss_dssp EEECCCCC------CHHHHHH
T ss_pred HhhhhHHHHhCCCCHHHHHHH
Confidence 9887543 2 45556654
No 229
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=37.46 E-value=1.5e+02 Score=24.05 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHH
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHA 50 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~ 50 (173)
+.+.++.++++|+.+|.|-|... .++|++.+-
T Consensus 189 ~~~~~~~~~~aGad~i~i~d~~~----------~~lsp~~f~ 220 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIFDTWG----------GVLTGRDYQ 220 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTG----------GGSCHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCCcc----------ccCCHHHHH
Confidence 34456777899999999988532 267776543
No 230
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=36.59 E-value=62 Score=26.83 Aligned_cols=48 Identities=19% Similarity=0.212 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
|.++++.+.+-.+|||+-+||==.. | -.|++-.+++.+.+-|.++|++
T Consensus 31 peEia~~A~~~~~AGAaivHlHvRd-p-----~dG~ps~d~~~~~e~~~~IR~~ 78 (311)
T 3e49_A 31 PDEVAQASIGAAEAGAAVIHLHARD-P-----RDGRPTQDPAAFAEFLPRIKSN 78 (311)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEEC-T-----TTCCEECCHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecC-C-----CCCCcCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999983211 0 0245666777777777777765
No 231
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=36.53 E-value=52 Score=28.95 Aligned_cols=23 Identities=17% Similarity=0.271 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhCceEEEeccC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQ 29 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq 29 (173)
.+..+.++.+.++|+..|.|...
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a 277 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTA 277 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECS
T ss_pred cchHHHHHHHHhhccceEEeccc
Confidence 45567789999999999999754
No 232
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=36.00 E-value=65 Score=26.51 Aligned_cols=63 Identities=19% Similarity=0.144 Sum_probs=39.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCC-CCccCCCCCCCcccCHHHHHHHHHHHHHh---cCCCCEEE-------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQS-WPKKCGHMHGKQIIPAEEHAAKIASARDA---IGDSDFVL------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~-~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a---~~~~d~~I------------- 67 (173)
++..+.+.++++++.||.=|-|-=+. .| |-.-++.+|-.+|+.-++++ ..+..+.|
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrP-------ga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~ 133 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRP-------GFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIE 133 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC-----------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHH
Confidence 35667788899999999988775332 23 33456777777666533332 22444566
Q ss_pred ecCCccc
Q 037554 68 ARADASF 74 (173)
Q Consensus 68 AGAD~if 74 (173)
+|||+|-
T Consensus 134 aGa~iIN 140 (297)
T 1tx2_A 134 AGAHIIN 140 (297)
T ss_dssp HTCCEEE
T ss_pred cCCCEEE
Confidence 8999986
No 233
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=35.64 E-value=22 Score=28.83 Aligned_cols=21 Identities=19% Similarity=0.064 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhCceEEEecc
Q 037554 8 NVQRTVKDLVAAGAAGCFLED 28 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iED 28 (173)
+..+.++.++++|+.+|++=|
T Consensus 29 ~~~~~a~~~~~~Ga~~I~~l~ 49 (305)
T 2nv1_A 29 INAEQAKIAEEAGAVAVMALE 49 (305)
T ss_dssp SSHHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHHcCCCEEEEcC
Confidence 446788999999999995433
No 234
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=34.72 E-value=1.7e+02 Score=24.50 Aligned_cols=43 Identities=23% Similarity=0.150 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
..++.-.+++|||.-|-=-|=- +=.+..||.+.+...-.++-|
T Consensus 146 Lak~Als~A~AGAdiVAPSdMM----------------DGrV~aIR~aLd~~G~~~v~I 188 (323)
T 1l6s_A 146 LGKQAVVAAAAGADFIAPSAAM----------------DGQVQAIRQALDAAGFKDTAI 188 (323)
T ss_dssp HHHHHHHHHHHTCSEEEECSCC----------------TTHHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHcCCCeEeccccc----------------ccHHHHHHHHHHhCCCCCcee
Confidence 4455556788898777644421 124455555555554456666
No 235
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=34.27 E-value=1.1e+02 Score=25.24 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=61.7
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE--------------
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL-------------- 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I-------------- 67 (173)
.+++..+.+.++++.++|-.+|-| ++||. ++++..++|++++++.. +.++.|
T Consensus 143 ~~~~e~~~~~a~~~~~~Gf~~iKi-------k~g~~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 209 (378)
T 2qdd_A 143 TGTPDQMLGLIAEAAAQGYRTHSA-------KIGGS------DPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEV 209 (378)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEE-------ECCSS------CHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhhheee-------cCCCC------ChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHH
Confidence 356778888999999999999887 23331 56888999999998764 334444
Q ss_pred ----ecCCcccccCC-CCHHHHhhhh---cCC------CCCHHHHHh---C-CccEEEechHH
Q 037554 68 ----ARADASFVEAP-RNDNEANWVW---GHT------LHTPEELKA---M-GFHLTVHPLTA 112 (173)
Q Consensus 68 ----AGAD~ifv~g~-~~~e~i~~i~---g~p------~~~~~eL~~---l-Gv~~v~~~~~~ 112 (173)
. .+. |++-+ .+.+.++++. ..| ..+.+++.+ . .++.|..-..-
T Consensus 210 ~~~l~-~~i-~iEqP~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 210 LNSVR-ARD-WIEQPCQTLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp HTSCC-CCC-EEECCSSSHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred HHHhC-CCc-EEEcCCCCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 5 566 77543 3667777762 234 245544443 3 37777775443
No 236
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=34.13 E-value=1.2e+02 Score=25.62 Aligned_cols=43 Identities=23% Similarity=0.186 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
..++.-.+.+|||.-|-=-|=- +=.+..||.+.+...-.++-|
T Consensus 152 L~k~Als~A~AGADiVAPSdMM----------------DGrV~aIR~aLd~~G~~~v~I 194 (328)
T 1w1z_A 152 LQKMAVSHAEAGADFVSPSDMM----------------DGRIGAIREALDETDHSDVGI 194 (328)
T ss_dssp HHHHHHHHHHHTCSEEEECSCC----------------TTHHHHHHHHHHHTTCTTSEE
T ss_pred HHHHHHHHHHcCCCeEeccccc----------------ccHHHHHHHHHHhCCCCCcee
Confidence 4455556688898777544421 124555666666655456666
No 237
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=34.05 E-value=33 Score=29.87 Aligned_cols=69 Identities=13% Similarity=0.160 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCC--------ccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE--------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWP--------KKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL-------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~p--------Krcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I-------- 67 (173)
+..++.+.++.++++||.||.+--.+.. ...|-..|+++.+. ..+-|+.++++.. +..++-
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~--sl~~i~~v~~~v~~~iPVIg~GGI~s~~ 386 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDI--STKFICEMYNYTNKQIPIIASGGIFSGL 386 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHH--HHHHHHHHHHHTTTCSCEEEESSCCSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHH--HHHHHHHHHHHcCCCCcEEEECCCCCHH
Q ss_pred -------ecCCcccc
Q 037554 68 -------ARADASFV 75 (173)
Q Consensus 68 -------AGAD~ifv 75 (173)
+|||+|.+
T Consensus 387 DA~e~l~aGAd~Vqi 401 (443)
T 1tv5_A 387 DALEKIEAGASVCQL 401 (443)
T ss_dssp HHHHHHHTTEEEEEE
T ss_pred HHHHHHHcCCCEEEE
No 238
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=34.01 E-value=32 Score=28.85 Aligned_cols=20 Identities=10% Similarity=0.012 Sum_probs=14.2
Q ss_pred HHHHhCCccEEEechHHHHH
Q 037554 96 EELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 96 ~eL~~lGv~~v~~~~~~~~a 115 (173)
.++-.+|.+.|.+|...+.+
T Consensus 296 ~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 296 FKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp HHHHHHTCSEEEECHHHHHH
T ss_pred HHHHHcCCCEEeecHHHHHH
Confidence 34555788888888777665
No 239
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=33.86 E-value=59 Score=26.60 Aligned_cols=43 Identities=12% Similarity=-0.007 Sum_probs=32.5
Q ss_pred ecCCcccccCCCCHHHHhhh-h---c------------CCCCCHHHHHhCCccEEEechH
Q 037554 68 ARADASFVEAPRNDNEANWV-W---G------------HTLHTPEELKAMGFHLTVHPLT 111 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-~---g------------~p~~~~~eL~~lGv~~v~~~~~ 111 (173)
+|||.|.++-. ++++++++ . + --.-++.++.+.|++.++.|..
T Consensus 212 aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvGsl 270 (285)
T 1o4u_A 212 AGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSRL 270 (285)
T ss_dssp TTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEGGG
T ss_pred cCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEeHH
Confidence 89999999774 67776655 1 1 1135789999999999999864
No 240
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=33.83 E-value=94 Score=26.41 Aligned_cols=50 Identities=16% Similarity=0.315 Sum_probs=37.9
Q ss_pred CCh-HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 4 GNA-LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 4 G~~-~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
+++ ..+.+.++++.++|-.+|-| ++|| ++++-+++|++++++.. +.++.|
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~-------~~~~d~e~v~avR~avG~d~~l~v 234 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKL-------RIGD-------AARVDIERVRHVRKVLGDEVDILT 234 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEE-------ECCS-------CHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CChHHHHHHHHHHHHHCCCCEEEE-------CCCC-------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 467 78889999999999999987 2444 56788899999998863 334444
No 241
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=33.69 E-value=24 Score=28.23 Aligned_cols=58 Identities=16% Similarity=0.209 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAPR 79 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~~ 79 (173)
-.+.++.+.++|+..|-|-=+ .| ++.+...+-|++.++ .+..+++ +|+|++++|.+.
T Consensus 22 t~~~~~~l~~~GaD~ielG~S---------~G---vt~~~~~~~v~~ir~--~~~Pivlm~y~~n~i~~G~dg~iiPdLp 87 (240)
T 1viz_A 22 PDEQLEILCESGTDAVIIGGS---------DG---VTEDNVLRMMSKVRR--FLVPCVLEVSAIEAIVPGFDLYFIPSVL 87 (240)
T ss_dssp CHHHHHHHHTSCCSEEEECC----------------CHHHHHHHHHHHTT--SSSCEEEECSCGGGCCSCCSEEEEEEET
T ss_pred cHHHHHHHHHcCCCEEEECCC---------CC---CCHHHHHHHHHHhhC--cCCCEEEecCccccccCCCCEEEEcccC
Confidence 345688999999998876431 23 233444444444444 3455665 999999998874
Q ss_pred C
Q 037554 80 N 80 (173)
Q Consensus 80 ~ 80 (173)
.
T Consensus 88 ~ 88 (240)
T 1viz_A 88 N 88 (240)
T ss_dssp T
T ss_pred c
Confidence 3
No 242
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=33.47 E-value=1e+02 Score=23.98 Aligned_cols=95 Identities=14% Similarity=-0.001 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCC--CEEE----------------
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDS--DFVL---------------- 67 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~--d~~I---------------- 67 (173)
.......++..++.||..|-+==..+.-+ . -..+++.+-|++.+++..+. .++|
T Consensus 70 ~~~k~~e~~~Ai~~GAdevd~vinig~~~----~----g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~i 141 (220)
T 1ub3_A 70 KEVKALEAALACARGADEVDMVLHLGRAK----A----GDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEA 141 (220)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHH----T----TCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCEEEecccchhhh----C----CCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 34456778888999999884311110000 0 13467788888888876432 1222
Q ss_pred ---ecCCcc-----cccCCCCHHHHhhh-h--c--CC---------CCCHHHHHhCCccEEEe
Q 037554 68 ---ARADAS-----FVEAPRNDNEANWV-W--G--HT---------LHTPEELKAMGFHLTVH 108 (173)
Q Consensus 68 ---AGAD~i-----fv~g~~~~e~i~~i-~--g--~p---------~~~~~eL~~lGv~~v~~ 108 (173)
+|||.| |.++-.+.+.++.+ + + .| .-++.++-++|.+|+=.
T Consensus 142 a~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 142 AIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGT 204 (220)
T ss_dssp HHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccch
Confidence 899988 44344566666655 1 1 11 12345566788887644
No 243
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=33.32 E-value=80 Score=26.47 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE--------------ecCCcccc
Q 037554 10 QRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------ARADASFV 75 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------AGAD~ifv 75 (173)
.+.++.+.++|+..|+|. . +| +. .+.+.+.|+.+++.- +..+++ +|||.|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld-~------a~--G~----~~~~~~~i~~i~~~~-~~~Vivg~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLD-S------AH--GH----SLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEEC-C------SC--CS----BHHHHHHHHHHHHHC-CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEe-C------CC--CC----cHHHHHHHHHHHHhc-CCcEEEccCCCHHHHHHHHHcCcCEEEE
Confidence 577888999999999875 1 12 11 144555666666553 333443 89999987
No 244
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=33.06 E-value=63 Score=26.78 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
|.++++.+.+-.+|||+-+||==.. | -.|++-.+++.+.+-|.++|++
T Consensus 31 peEia~~A~~~~~AGAaivHlHvRd-p-----~dG~ps~d~~~~~e~~~~IR~~ 78 (311)
T 3e02_A 31 PEEIVKEGVAAAEAGAAMLHLHARD-P-----LNGRPSQDPDLFMRFLPQLKER 78 (311)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECEEC-T-----TTCCEECCHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecC-C-----CCCCcCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999983211 0 0245566777777777777665
No 245
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=33.01 E-value=66 Score=26.44 Aligned_cols=39 Identities=21% Similarity=0.177 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHH
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASAR 57 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~ 57 (173)
.+.+-++...+.|...|-|-|.+.. +|.++-++-|+.|+
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGti~-----------l~~~~~~~lI~~a~ 149 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGTLP-----------MTNKEKAAYIADFS 149 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSSC-----------CCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc-----------CCHHHHHHHHHHHH
Confidence 3556677788899999999998753 67777776666443
No 246
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=32.06 E-value=69 Score=27.21 Aligned_cols=79 Identities=11% Similarity=0.178 Sum_probs=41.6
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEEecCCcccccCCCCHHHHhhhhcC
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVLARADASFVEAPRNDNEANWVWGH 90 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i~g~ 90 (173)
+.++.++++||.+|.+.-..+ +- . . .-.+.-+.+..|+.++. .+.. +|.--|+++.+++.
T Consensus 264 e~A~~a~~aGad~I~vs~~gg--r~-~-~--~g~~~~~~l~~v~~av~--~~ip-------Via~GGI~~g~Dv~----- 323 (392)
T 2nzl_A 264 DDAREAVKHGLNGILVSNHGA--RQ-L-D--GVPATIDVLPEIVEAVE--GKVE-------VFLDGGVRKGTDVL----- 323 (392)
T ss_dssp HHHHHHHHTTCCEEEECCGGG--TS-S-T--TCCCHHHHHHHHHHHHT--TSSE-------EEECSSCCSHHHHH-----
T ss_pred HHHHHHHHcCCCEEEeCCCCC--Cc-C-C--CCcChHHHHHHHHHHcC--CCCE-------EEEECCCCCHHHHH-----
Confidence 457788899999998832111 00 0 0 01233455555554331 1122 22333556665552
Q ss_pred CCCCHHHHHhCCccEEEechHHHHH
Q 037554 91 TLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 91 p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
..-.+|.+.|.+|...+.+
T Consensus 324 ------kalalGAd~V~iGr~~l~~ 342 (392)
T 2nzl_A 324 ------KALALGAKAVFVGRPIVWG 342 (392)
T ss_dssp ------HHHHTTCSEEEECHHHHHH
T ss_pred ------HHHHhCCCeeEECHHHHHH
Confidence 3334788888888766655
No 247
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=32.05 E-value=1.3e+02 Score=24.68 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=62.3
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE-------------
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL------------- 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I------------- 67 (173)
|.+++..+.+.++++.+.|-.+|-| +.|| -++++-.++|++++++.. +.++.|
T Consensus 137 ~~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~------~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~ 203 (366)
T 1tkk_A 137 SVNSPEEMAADAENYLKQGFQTLKI-------KVGK------DDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVT 203 (366)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEE-------ECCS------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEE-------EeCC------CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 3457788888899999999999887 2333 146788899999998863 344555
Q ss_pred -----e--cCCcccccCC---CCHHHHhhhh---cCC------CCCHHHHHh---C-CccEEEechHH
Q 037554 68 -----A--RADASFVEAP---RNDNEANWVW---GHT------LHTPEELKA---M-GFHLTVHPLTA 112 (173)
Q Consensus 68 -----A--GAD~ifv~g~---~~~e~i~~i~---g~p------~~~~~eL~~---l-Gv~~v~~~~~~ 112 (173)
. +.+..|++-+ .+.+.++++. ..| ..+.+++.+ . .++.|..-+.-
T Consensus 204 ~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 271 (366)
T 1tkk_A 204 AIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMK 271 (366)
T ss_dssp HHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred HHHHHhhcCCCceEEECCCCcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhh
Confidence 2 2666677654 2556666662 233 245544443 3 47777775443
No 248
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=32.02 E-value=85 Score=25.48 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=40.3
Q ss_pred CChHHHHHHHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-------------
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL------------- 67 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I------------- 67 (173)
-++..+.+.++++++.||.=|-|-=. +.| |-+-++.+|-.+|+.-+.++.. +..+-|
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrp-------ga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl~ 98 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRP-------GATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQ 98 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC---------------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCC-------CCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHHH
Confidence 35678888999999999998877632 222 3334566666666555554432 334555
Q ss_pred ecCCccc-ccCCC-CHHHHh
Q 037554 68 ARADASF-VEAPR-NDNEAN 85 (173)
Q Consensus 68 AGAD~if-v~g~~-~~e~i~ 85 (173)
+|||+|- +.+.. +++-+.
T Consensus 99 aGa~iINdvsg~~~d~~m~~ 118 (280)
T 1eye_A 99 NGAQMVNDVSGGRADPAMGP 118 (280)
T ss_dssp TTCCEEEETTTTSSCTTHHH
T ss_pred cCCCEEEECCCCCCCHHHHH
Confidence 9999986 44443 443333
No 249
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=31.91 E-value=1.3e+02 Score=25.15 Aligned_cols=52 Identities=29% Similarity=0.435 Sum_probs=38.3
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
|.+++..+.+.++++.++|-.+|-| +.|+ ++++-+++|++++++.. +.++.|
T Consensus 142 g~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~-------~~~~~~e~v~avR~a~g~d~~l~v 194 (397)
T 2qde_A 142 GAGEPEAVAEEALAVLREGFHFVKL-------KAGG-------PLKADIAMVAEVRRAVGDDVDLFI 194 (397)
T ss_dssp CCSCHHHHHHHHHHHHHHTCSCEEE-------ECCS-------CHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCHHHHHHHHHHHHHhhhhheee-------cccC-------CHHHHHHHHHHHHHhhCCCCEEEE
Confidence 3456778888899999999988887 2222 56778899999998863 455655
No 250
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=31.72 E-value=53 Score=26.05 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=35.6
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCC
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAP 78 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~ 78 (173)
+.++.+.++|+.+|-|-=+. =++.+...+-+++.++ .+..+++ .|||++|+|.+
T Consensus 22 ~~~~~~~~~GtD~i~vGGs~------------gvt~~~~~~~v~~ik~--~~~Pvvlfp~~~~~v~~gaD~~l~psl 84 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGGSD------------GVTEDNVLRMMSKVRR--FLVPCVLEVSAIEAIVPGFDLYFIPSV 84 (228)
T ss_dssp THHHHHHTSSCSEEEECCCS------------CCCHHHHHHHHHHHTT--SSSCEEEECSCGGGCCSCCSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcC------------CCCHHHHHHHHHHhhc--cCCCEEEeCCCHHHccccCCEEEEeee
Confidence 34566788999999874432 2444555555565554 3445555 89999999886
No 251
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=31.52 E-value=1.5e+02 Score=25.16 Aligned_cols=43 Identities=12% Similarity=0.020 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCC-CCEEE
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGD-SDFVL 67 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~-~d~~I 67 (173)
..++.-.+++|||.-|-=-|=- +=.+..||.+++...- .++-|
T Consensus 161 Lak~Als~A~AGAdiVAPSdMM----------------DGrV~aIR~aLd~~G~~~~v~I 204 (342)
T 1h7n_A 161 LAAVAVNYAKAGAHCVAPSDMI----------------DGRIRDIKRGLINANLAHKTFV 204 (342)
T ss_dssp HHHHHHHHHHHTCSEEEECCCC----------------TTHHHHHHHHHHHTTCTTTCEE
T ss_pred HHHHHHHHHHcCCCeeeccccc----------------ccHHHHHHHHHHHCCCccCceE
Confidence 4455566788998777544421 1245556666665543 56666
No 252
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=31.43 E-value=61 Score=25.84 Aligned_cols=54 Identities=11% Similarity=0.153 Sum_probs=34.1
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCC
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAP 78 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~ 78 (173)
+.++.+.++|+.+|-|-=+. | ++.+...+-+++.++ .+..+++ .|||.+|+|.+
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~---------g---vt~~~~~~~v~~ik~--~~~Piil~p~~~~~~~~gaD~il~psl 89 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTD---------D---VTEDNVIHLMSKIRR--YPLPLVLEISNIESVMPGFDFYFVPTV 89 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSS---------C---CCHHHHHHHHHHHTT--SCSCEEEECCCSTTCCTTCSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcC---------C---cCHHHHHHHHHHhcC--cCCCEEEecCCHHHhhcCCCEEEEccc
Confidence 45566789999999875422 2 334444444454444 2334444 99999999886
No 253
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=30.74 E-value=78 Score=28.44 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=47.1
Q ss_pred ChHHHHHHHHHHHHhC-----ceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC------CCCEEE-----
Q 037554 5 NALNVQRTVKDLVAAG-----AAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG------DSDFVL----- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aG-----vagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~------~~d~~I----- 67 (173)
+...+.+.++++++.| |.=|-|-=+ +.| |-.-+|.+|-.+|+.-++++.. ..++.|
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRP-------Ga~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~ 319 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRP-------NSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTY 319 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCST-------TCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCC-------CCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCC
Confidence 5677888889999999 887766532 223 4456777877777655555431 136666
Q ss_pred ----------ecCCccc-ccCCC-CHHHH
Q 037554 68 ----------ARADASF-VEAPR-NDNEA 84 (173)
Q Consensus 68 ----------AGAD~if-v~g~~-~~e~i 84 (173)
+|||+|= |.|.. +++.+
T Consensus 320 ~a~VaeaAl~aGadIINDVsg~~~d~~m~ 348 (545)
T 2bmb_A 320 RSNVAKEAIKVGVDIINDISGGLFDSNMF 348 (545)
T ss_dssp CHHHHHHHHHTTCCEEEETTTTSSCTTHH
T ss_pred cHHHHHHHHHcCCCEEEeCCCCcCChHHH
Confidence 9999986 55543 44333
No 254
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=30.23 E-value=1.5e+02 Score=25.03 Aligned_cols=20 Identities=20% Similarity=-0.021 Sum_probs=12.7
Q ss_pred ecCCcccc-cCCCCHHHHhhh
Q 037554 68 ARADASFV-EAPRNDNEANWV 87 (173)
Q Consensus 68 AGAD~ifv-~g~~~~e~i~~i 87 (173)
-|||+|+| |++.=.+-++++
T Consensus 244 EGAD~vMVKPal~YLDIi~~v 264 (330)
T 1pv8_A 244 EGADMLMVKPGMPYLDIVREV 264 (330)
T ss_dssp TTCSBEEEESCGGGHHHHHHH
T ss_pred hCCceEEEecCccHHHHHHHH
Confidence 57777777 555555666555
No 255
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=30.19 E-value=2e+02 Score=24.56 Aligned_cols=94 Identities=18% Similarity=0.073 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE--------------ecCCc
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------ARADA 72 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------AGAD~ 72 (173)
.+..+.++.+.++|+.+|.| |.. | |. .....+.|++.++.-.+..+++ +|||.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i-~~~------~--G~----~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~ 302 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVI-DTA------H--GH----SRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADA 302 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEE-CCS------C--CS----SHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSE
T ss_pred HhHHHHHHHHHHhCCCEEEE-Eec------C--Cc----hHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCE
Confidence 34567889999999999988 222 1 11 1344455666655542333433 89999
Q ss_pred ccccC---------------CCCHHHHhhh----h--cCC---------CCCHHHHHhCCccEEEechHHH
Q 037554 73 SFVEA---------------PRNDNEANWV----W--GHT---------LHTPEELKAMGFHLTVHPLTAL 113 (173)
Q Consensus 73 ifv~g---------------~~~~e~i~~i----~--g~p---------~~~~~eL~~lGv~~v~~~~~~~ 113 (173)
|.+-+ ..+.+.+..+ . +.| .-++...-.+|.+.|.+|..++
T Consensus 303 I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l 373 (494)
T 1vrd_A 303 VKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFA 373 (494)
T ss_dssp EEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred EEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHh
Confidence 88711 1222222222 0 123 1245666779999999997775
No 256
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=30.00 E-value=66 Score=25.86 Aligned_cols=44 Identities=16% Similarity=0.059 Sum_probs=33.7
Q ss_pred ecCCcccccCCCCHHHHhhh----h-----------c-CCCCCHHHHHhCCccEEEechHH
Q 037554 68 ARADASFVEAPRNDNEANWV----W-----------G-HTLHTPEELKAMGFHLTVHPLTA 112 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i----~-----------g-~p~~~~~eL~~lGv~~v~~~~~~ 112 (173)
+|||.|.++. -++++++++ . | --.-++.++.+.|+..++.+...
T Consensus 201 aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~vGs~i 260 (273)
T 2b7n_A 201 AGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGALI 260 (273)
T ss_dssp HTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEECTHHH
T ss_pred cCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEEcHHh
Confidence 8999999876 477887754 1 1 11358899999999999998764
No 257
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=29.82 E-value=1e+02 Score=25.08 Aligned_cols=19 Identities=5% Similarity=-0.047 Sum_probs=13.3
Q ss_pred HHHHhCCccEEEechHHHH
Q 037554 96 EELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 96 ~eL~~lGv~~v~~~~~~~~ 114 (173)
...-++|+.-|..++...+
T Consensus 203 a~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 203 AIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHTCSEEEESHHHHT
T ss_pred HHHHHcCCCEEEEChHHhC
Confidence 4566778888888776644
No 258
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=29.07 E-value=2.4e+02 Score=23.13 Aligned_cols=21 Identities=14% Similarity=-0.002 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhCceEEEecc
Q 037554 8 NVQRTVKDLVAAGAAGCFLED 28 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iED 28 (173)
...+.+++..++|..||.|-=
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~ 173 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHM 173 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECC
Confidence 344555667789999998864
No 259
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=28.94 E-value=2.2e+02 Score=22.73 Aligned_cols=117 Identities=12% Similarity=0.026 Sum_probs=67.0
Q ss_pred CChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE-------------e--
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL-------------A-- 68 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I-------------A-- 68 (173)
.+...+.+.++++++.||.=|.|-=... .--.++.+..-|++.++.. +..+.| +
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~----------~~eE~~rv~~vi~~l~~~~-~~pisIDT~~~~v~~aal~a~~ 99 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPT----------ADDPVRVMEWLVKTIQEVV-DLPCCLDSTNPDAIEAGLKVHR 99 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSC----------SSCHHHHHHHHHHHHHHHC-CCCEEEECSCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcC----------chhHHHHHHHHHHHHHHhC-CCeEEEeCCCHHHHHHHHHhCC
Confidence 4566788888999999998886643321 1124555665666655542 445666 6
Q ss_pred cCCccc-ccCCCC-HHHHhhh--h-c------------CCCC----------CHHHHHhCCcc---EEEechHHH----H
Q 037554 69 RADASF-VEAPRN-DNEANWV--W-G------------HTLH----------TPEELKAMGFH---LTVHPLTAL----Y 114 (173)
Q Consensus 69 GAD~if-v~g~~~-~e~i~~i--~-g------------~p~~----------~~~eL~~lGv~---~v~~~~~~~----~ 114 (173)
|||+|- +.+..+ .+++..+ . + .|.. ..+.+.++|++ .++-|...+ .
T Consensus 100 Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~ 179 (271)
T 2yci_X 100 GHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQ 179 (271)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTST
T ss_pred CCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCH
Confidence 999998 666542 1333333 1 1 2211 34567889997 566665443 1
Q ss_pred HHHHHHHHHHHHHHHcC
Q 037554 115 ASARALVDVLKTLKESG 131 (173)
Q Consensus 115 aa~~a~~~~~~~l~~~g 131 (173)
.....+.+.++.+++.+
T Consensus 180 ~~~~~~l~~l~~~~~~~ 196 (271)
T 2yci_X 180 EHAVEVLETIRQIKLMA 196 (271)
T ss_dssp HHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 22233455556665554
No 260
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=28.82 E-value=47 Score=27.00 Aligned_cols=51 Identities=12% Similarity=-0.054 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
..+.+.++.+..+|+.-|+|-+.+.+-++-+. -=.+++|..++++.+++..
T Consensus 80 ~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~n---l~~s~~e~l~~~~~~v~~a 130 (293)
T 3ewb_X 80 GDIDRAEEALKDAVSPQIHIFLATSDVHMEYK---LKMSRAEVLASIKHHISYA 130 (293)
T ss_dssp HHHHHHHHHHTTCSSEEEEEEEECSHHHHHHT---TCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEEecCcHHHHHHH---hCCCHHHHHHHHHHHHHHH
Confidence 34566666666689999999888765321111 1136788888887776543
No 261
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=28.35 E-value=43 Score=27.79 Aligned_cols=68 Identities=24% Similarity=0.312 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCC-CCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE---------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQS-WPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL--------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~-~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I--------------- 67 (173)
++..+.+.++++++.||.=|-|-=+. .| |-.-+|.+|=.+|+.-++++.. ..++.|
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~Va~aAl~ 103 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRP-------GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALA 103 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHH
Confidence 45677788899999999888665432 22 4345677777777666654432 235444
Q ss_pred ecCCccc-ccCCC
Q 037554 68 ARADASF-VEAPR 79 (173)
Q Consensus 68 AGAD~if-v~g~~ 79 (173)
+|||+|- |.+..
T Consensus 104 aGa~iINDVsg~~ 116 (314)
T 2vef_A 104 AGADLVNDITGLM 116 (314)
T ss_dssp TTCCEEEETTTTC
T ss_pred cCCCEEEECCCCC
Confidence 8999887 55543
No 262
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=28.27 E-value=2e+02 Score=23.62 Aligned_cols=57 Identities=19% Similarity=0.170 Sum_probs=39.1
Q ss_pred CChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
+++..+.+.++++.++|..+|-|- +||.....+-+++...++|+++|++.. +.++.|
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik-------~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~v 205 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLH-------TWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMI 205 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEE-------CCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-------CCcCccccccchHHHHHHHHHHHHHhCCCCeEEE
Confidence 467888889999999999998863 233111112267888999999998864 344554
No 263
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=28.00 E-value=91 Score=26.26 Aligned_cols=19 Identities=21% Similarity=0.046 Sum_probs=15.6
Q ss_pred HHHHHHHHHhCceEEEecc
Q 037554 10 QRTVKDLVAAGAAGCFLED 28 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iED 28 (173)
.+.++.++++||.+|.+-=
T Consensus 201 ~~~A~~l~~aGad~I~V~g 219 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSG 219 (368)
T ss_dssp HHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHhCCCCEEEEeC
Confidence 4568899999999998753
No 264
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=27.99 E-value=1.4e+02 Score=25.07 Aligned_cols=23 Identities=26% Similarity=0.190 Sum_probs=18.4
Q ss_pred CChHHHHHHHHHHHHhCceEEEe
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~i 26 (173)
|.+....+.+++++++|+..|.|
T Consensus 96 g~~~~~~e~~~~a~~aGvdvI~i 118 (361)
T 3r2g_A 96 GCTENELQRAEALRDAGADFFCV 118 (361)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHcCCCEEEE
Confidence 34456778899999999998776
No 265
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=27.87 E-value=2.3e+02 Score=22.50 Aligned_cols=68 Identities=7% Similarity=0.026 Sum_probs=46.9
Q ss_pred HHHHHhcCCCCEEEecCCcccccCCCCHHHHhhhhcCCCCCHHHHHhCCccEEEechHHHHH-HHHHHHHHH
Q 037554 54 ASARDAIGDSDFVLARADASFVEAPRNDNEANWVWGHTLHTPEELKAMGFHLTVHPLTALYA-SARALVDVL 124 (173)
Q Consensus 54 ~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i~g~p~~~~~eL~~lGv~~v~~~~~~~~a-a~~a~~~~~ 124 (173)
+.+++...+.+++=.|-..-++-|.++.+++.++- .-..+.|.+.|++.+.++.....+ ++..+++.+
T Consensus 24 ~~i~~~lp~~~~iy~~D~a~~PYG~~~~~~i~~~~---~~~~~~L~~~g~~~iVIACNTa~~~al~~lr~~~ 92 (268)
T 3out_A 24 KNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFA---AQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIA 92 (268)
T ss_dssp HHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHH---HHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCcEEEecCCCCCCCCCCCHHHHHHHH---HHHHHHHHHCCCCEEEEeCCChHHHHHHHHHHhc
Confidence 34444455566666777777788888988887662 123567888899999999887776 556666554
No 266
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=27.42 E-value=1.8e+02 Score=23.85 Aligned_cols=50 Identities=12% Similarity=0.316 Sum_probs=37.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
++..+.+.++++.++|-.+|-|- +||. ++++.+++|+++|++.. +.++.|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik-------~g~~------~~~~~~e~v~avr~a~G~d~~l~v 196 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMK-------VGRP------DLKEDVDRVSALREHLGDSFPLMV 196 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE-------CCCS------SHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC-------CCCC------CHHHHHHHHHHHHHHhCCCCeEEE
Confidence 57778888999999999888762 3441 56788899999999874 455666
No 267
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=27.33 E-value=97 Score=26.35 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHHHhCceEEEe
Q 037554 6 ALNVQRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~i 26 (173)
...+.+.++++.+.|+-+|.|
T Consensus 72 id~l~~~~~~~~~lGi~av~L 92 (356)
T 3obk_A 72 MEDLLKEVGEARSYGIKAFML 92 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEE
Confidence 356778889999999999954
No 268
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=26.96 E-value=1.4e+02 Score=24.39 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=37.3
Q ss_pred CCChHHHHHHHHHHHH-hCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 3 GGNALNVQRTVKDLVA-AGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~-aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
.|++..+.+.++++.+ +|-.+|-| ++||. ++++-.++|+++|++.. +.++.|
T Consensus 140 ~~~~e~~~~~a~~~~~~~Gf~~iKi-------k~g~~------~~~~~~e~v~avr~a~g~~~~l~v 193 (370)
T 1nu5_A 140 SGDTARDIDSALEMIETRRHNRFKV-------KLGAR------TPAQDLEHIRSIVKAVGDRASVRV 193 (370)
T ss_dssp SSCHHHHHHHHHHHHHTTSCSEEEE-------ECSSS------CHHHHHHHHHHHHHHHGGGCEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCccEEEE-------ecCCC------ChHHHHHHHHHHHHhcCCCCEEEE
Confidence 3567778888899988 99999887 23441 45777899999998764 344444
No 269
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=26.94 E-value=97 Score=27.05 Aligned_cols=46 Identities=17% Similarity=0.208 Sum_probs=29.9
Q ss_pred ChHHHHHHHHHHHHhCceEEEec-cCCCCccCCCCCCCcccCHHHHHHHHHHHH
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLE-DQSWPKKCGHMHGKQIIPAEEHAAKIASAR 57 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iE-Dq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~ 57 (173)
+...+.+.++++++.||.=|-|- .++.| |-.-+|.+|-.+|+.-++
T Consensus 210 ~~~~al~~A~~mv~~GAdIIDIGgeSTrP-------Ga~~Vs~~EE~~Rv~pvI 256 (442)
T 3mcm_A 210 DDNQRKLNLDELIQSGAEIIDIGAESTKP-------DAKPISIEEEFNKLNEFL 256 (442)
T ss_dssp CCCHHHHHHHHHHHHTCSEEEEECCCCCC-----------CCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCC-------CCCCCCHHHHHHHHHHHH
Confidence 45678888999999999988665 23333 445678888777754333
No 270
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=26.81 E-value=1.8e+02 Score=24.74 Aligned_cols=50 Identities=16% Similarity=0.058 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
|....+....+||.|+.||=-..|.+.- ..+..-++++++..-++..+..
T Consensus 328 v~~~a~AAvA~GA~gl~iE~H~~pd~a~-~D~~~sl~p~el~~lv~~i~~i 377 (385)
T 3nvt_A 328 LLPCAKAALAIEADGVMAEVHPDPAVAL-SDSAQQMDIPEFEEFWNAILAS 377 (385)
T ss_dssp HHHHHHHHHHTTCSEEEEEBCSCGGGCS-SCTTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEecCChhhcC-CcccccCCHHHHHHHHHHHHHH
Confidence 4456777889999999999776666544 4555666777776666655544
No 271
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=26.45 E-value=54 Score=25.61 Aligned_cols=59 Identities=20% Similarity=0.076 Sum_probs=38.7
Q ss_pred CCcccCHHHHHHHHHHHHHhcCCCCEEEecCCcccccCCCCHHHHhhhh---cCC--------------C--CC---HHH
Q 037554 40 GKQIIPAEEHAAKIASARDAIGDSDFVLARADASFVEAPRNDNEANWVW---GHT--------------L--HT---PEE 97 (173)
Q Consensus 40 g~~l~~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i~---g~p--------------~--~~---~~e 97 (173)
+.+|.+.+.+.+--+|+.. +||.+|=+. +.+.++++. ..| . ++ +++
T Consensus 29 ~~pl~~~~~~~~~A~a~~~---------~Ga~~i~~~---~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~ 96 (229)
T 3q58_A 29 GSPMDKPEIVAAMAQAAAS---------AGAVAVRIE---GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDA 96 (229)
T ss_dssp TSTTCSHHHHHHHHHHHHH---------TTCSEEEEE---SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHH
T ss_pred CCCCCCcchHHHHHHHHHH---------CCCcEEEEC---CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHH
Confidence 5688888877655554443 689888764 456666551 122 1 22 578
Q ss_pred HHhCCccEEEech
Q 037554 98 LKAMGFHLTVHPL 110 (173)
Q Consensus 98 L~~lGv~~v~~~~ 110 (173)
+.++|++.|.+..
T Consensus 97 ~~~aGad~I~l~~ 109 (229)
T 3q58_A 97 LAQAGADIIAFDA 109 (229)
T ss_dssp HHHHTCSEEEEEC
T ss_pred HHHcCCCEEEECc
Confidence 8999999998754
No 272
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=26.09 E-value=1.2e+02 Score=24.82 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=58.8
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE--------------
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL-------------- 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I-------------- 67 (173)
.+++..+.+.++++.++|-.+|-| ++|+ +++.-.++|+++|++.. +.++.|
T Consensus 144 ~~~~~~~~~~a~~~~~~Gf~~iKi-------k~g~-------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 209 (371)
T 2ps2_A 144 VGEPEDMRARVAKYRAKGYKGQSV-------KISG-------EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRL 209 (371)
T ss_dssp SCCHHHHHHHHHHHHTTTCCEEEE-------ECCS-------CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhChheEEe-------ecCC-------CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHH
Confidence 356788888999999999999887 2333 46788899999888753 233444
Q ss_pred ---e--cCCcccccCC-CCHHHHhhhh---cCC------CCCHHHHHhC----CccEEEechH
Q 037554 68 ---A--RADASFVEAP-RNDNEANWVW---GHT------LHTPEELKAM----GFHLTVHPLT 111 (173)
Q Consensus 68 ---A--GAD~ifv~g~-~~~e~i~~i~---g~p------~~~~~eL~~l----Gv~~v~~~~~ 111 (173)
. -.+. |++-+ .+.+.++++. ..| ..+.+++.++ .++.|..-..
T Consensus 210 ~~~l~~~~~i-~iE~P~~~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (371)
T 2ps2_A 210 LRLLPHGLDF-ALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKIS 271 (371)
T ss_dssp HHHSCTTCCC-EEECCBSSHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHH
T ss_pred HHHHHhhcCC-cCcCCcCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechh
Confidence 1 2234 66443 3666676662 233 2455555442 4777776443
No 273
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.01 E-value=28 Score=27.99 Aligned_cols=46 Identities=11% Similarity=-0.028 Sum_probs=29.5
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
+.+++..++|+..|+|-+...+. |...+--.+.++..++++.+++.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~---h~~~~~~~~~~e~~~~~~~~v~~ 128 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEG---FSKANINCTIAESIERLSPVIGA 128 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHH---HHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCHH---HHHHHcCCCHHHHHHHHHHHHHH
Confidence 56778889999999998765421 11111124678888886665544
No 274
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=25.89 E-value=1.8e+02 Score=24.21 Aligned_cols=50 Identities=18% Similarity=0.322 Sum_probs=38.3
Q ss_pred CChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
+++..+.+.++++.+.|...|-|- .|+ ++++-+++|+++|++.. +.++.|
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiK-------vG~-------~~~~d~~~v~avR~a~g~d~~l~v 200 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLK-------VGR-------APRKDAANLRAMRQRVGADVEILV 200 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE-------CCS-------CHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEeec-------cCC-------CHHHHHHHHHHHHHHcCCCceEEE
Confidence 468889999999999999998774 121 57889999999998864 334444
No 275
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=25.66 E-value=2.2e+02 Score=24.05 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
..++.-.+.+|||.-|-=-|=- +=.+..||.+.+...-.++-|
T Consensus 157 L~k~Als~A~AGADiVAPSdMM----------------DGrV~aIR~aLd~~G~~~v~I 199 (337)
T 1w5q_A 157 LVRQALSHAEAGAQVVAPSDMM----------------DGRIGAIREALESAGHTNVRV 199 (337)
T ss_dssp HHHHHHHHHHTTCSEEEECSCC----------------TTHHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHcCCCeEeccccc----------------ccHHHHHHHHHHHCCCCCcee
Confidence 3445556688888777544421 124555666666655456666
No 276
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=25.50 E-value=1.6e+02 Score=26.49 Aligned_cols=21 Identities=24% Similarity=0.197 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhCceEEEec
Q 037554 7 LNVQRTVKDLVAAGAAGCFLE 27 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iE 27 (173)
.+..+-+..|.+|||.-|.|.
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD 300 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLD 300 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC
T ss_pred ccHHHHHHHHHhcCCcEEEEe
Confidence 456778899999999999884
No 277
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=25.50 E-value=1.7e+02 Score=24.26 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=37.6
Q ss_pred CCh---HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 4 GNA---LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 4 G~~---~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
+++ ..+.+.++++.++|-.+|-| ++|| -++++-+++|+++|++.. +.++.|
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKi-------k~g~------~~~~~d~e~v~avR~a~G~d~~l~v 189 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKV-------KIGG------TSFKEDVRHINALQHTAGSSITMIL 189 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEE-------ECSS------SCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEE-------cCCC------CCHHHHHHHHHHHHHhhCCCCEEEE
Confidence 467 77888889999999999887 2344 146788899999998874 344555
No 278
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=25.43 E-value=69 Score=23.76 Aligned_cols=42 Identities=24% Similarity=0.279 Sum_probs=26.1
Q ss_pred ecCCcccccCCCCHHHHhhh-----h-cCC----CC---CH----HHHHhCCccEE-Eec
Q 037554 68 ARADASFVEAPRNDNEANWV-----W-GHT----LH---TP----EELKAMGFHLT-VHP 109 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-----~-g~p----~~---~~----~eL~~lGv~~v-~~~ 109 (173)
+|||+|-++...+.+.+.++ . |.+ .. ++ +++.++|+..| +++
T Consensus 76 ~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~ 135 (207)
T 3ajx_A 76 AGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHA 135 (207)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEEe
Confidence 89999988776665555444 1 311 11 32 35677899999 654
No 279
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=25.38 E-value=2.3e+02 Score=22.47 Aligned_cols=49 Identities=18% Similarity=0.189 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 10 QRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
....+.-...|+.|+.||=...|.+.-. .+++-++++++..-++.++..
T Consensus 210 ~~~~~aAva~Ga~Gl~iE~H~~~d~al~-D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 210 IPLAKAAYAIGADGIMVEVHPEPEKALS-DSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp HHHHHHHHHTTCSEEEEEBCSSGGGCSS-CTTTCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEecCCccccCC-hhhcCCCHHHHHHHHHHHHHH
Confidence 3445667889999999997765554322 566667888888887777654
No 280
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=24.93 E-value=64 Score=26.07 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=22.8
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
|-.+|++-|+++|++.|+.|++--|.
T Consensus 75 TGEiS~~mL~d~G~~~ViiGHSERR~ 100 (255)
T 1tre_A 75 TGETSAAMLKDIGAQYIIIGHSERRT 100 (255)
T ss_dssp TTCCCHHHHHHHTCCEEEESCHHHHH
T ss_pred CCcCCHHHHHHcCCCEEEECcccccc
Confidence 44689999999999999999988665
No 281
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=24.89 E-value=1.2e+02 Score=25.47 Aligned_cols=56 Identities=16% Similarity=0.196 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCc-ccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQ-IIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~-l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
..+.+.++++.+.|+-+|.|==- |..-.- .|.. .-+-.-.+.-|++++++- ||++|
T Consensus 64 d~l~~~~~~~~~lGi~~v~LFgv--p~~Kd~-~gs~A~~~~g~v~rair~iK~~~--p~l~v 120 (328)
T 1w1z_A 64 DRAVEECKELYDLGIQGIDLFGI--PEQKTE-DGSEAYNDNGILQQAIRAIKKAV--PELCI 120 (328)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEC--CSSCCS-SCGGGGCTTSHHHHHHHHHHHHS--TTSEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECC--CCCCCc-cccccCCCCChHHHHHHHHHHHC--CCeEE
Confidence 56778889999999999875221 110000 0111 222233455566666654 66666
No 282
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=24.86 E-value=2.1e+02 Score=25.52 Aligned_cols=31 Identities=19% Similarity=0.038 Sum_probs=23.8
Q ss_pred CCCC-hHH-HHHHHHHHHHhCceEEEeccCCCC
Q 037554 2 GGGN-ALN-VQRTVKDLVAAGAAGCFLEDQSWP 32 (173)
Q Consensus 2 GyG~-~~~-v~rtv~~~~~aGvagi~iEDq~~p 32 (173)
||.. +.+ +.+.++...++|+.-|+|=|.+.+
T Consensus 110 G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd 142 (539)
T 1rqb_A 110 GYRHYNDEVVDRFVDKSAENGMDVFRVFDAMND 142 (539)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CcccCcccccHHHHHHHHhCCCCEEEEEEehhH
Confidence 5553 333 578899999999999999987753
No 283
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.76 E-value=69 Score=24.23 Aligned_cols=86 Identities=16% Similarity=0.129 Sum_probs=50.5
Q ss_pred HHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE---------ecCCcccccCCCC
Q 037554 10 QRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL---------ARADASFVEAPRN 80 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I---------AGAD~ifv~g~~~ 80 (173)
...++.+.++|+..|++-+.. .+.+++.+.|+...+. .+..++| +|||+|-+.. .+
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~-------------~~~~~~~~~i~~l~~~-~~~~livnd~~~~A~~~gadgvhl~~-~~ 80 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPE-------------TPAMYSERLLTLIPEK-YHRRIVTHEHFYLKEEFNLMGIHLNA-RN 80 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSS-------------CCHHHHHHHHHHSCGG-GGGGEEESSCTTHHHHTTCSEEECCS-SS
T ss_pred HHHHHHHHHCCCCEEEEccCC-------------CCHHHHHHHHHHHHHH-hCCeEEEeCCHHHHHHcCCCEEEECc-cc
Confidence 477899999999999988542 3456666666554432 2355776 8999886632 22
Q ss_pred HHHHh--hhh-cCCCCCHHHHHh--CCccEEEech
Q 037554 81 DNEAN--WVW-GHTLHTPEELKA--MGFHLTVHPL 110 (173)
Q Consensus 81 ~e~i~--~i~-g~p~~~~~eL~~--lGv~~v~~~~ 110 (173)
.+... ... +....|.+|+.+ +|++.+.+++
T Consensus 81 ~~~~~~~~~~ig~s~~t~~e~~~A~~GaDyv~~g~ 115 (210)
T 3ceu_A 81 PSEPHDYAGHVSCSCHSVEEVKNRKHFYDYVFMSP 115 (210)
T ss_dssp CSCCTTCCSEEEEEECSHHHHHTTGGGSSEEEECC
T ss_pred cccccccCCEEEEecCCHHHHHHHhhCCCEEEECC
Confidence 21110 111 222345555532 6888887543
No 284
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=24.75 E-value=2.2e+02 Score=23.61 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHHHhCce-EEEeccCCCCccCCCCCC-Ccc-cCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAA-GCFLEDQSWPKKCGHMHG-KQI-IPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGva-gi~iEDq~~pKrcg~~~g-~~l-~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
++.+..+.++.++++|++ +|.|-=. |.+..| ..+ .+++...+-+++++++. +..+++
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNis-----CPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~v 198 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLS-----CPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGI 198 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECS-----CCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEE
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecC-----CCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEE
Confidence 578888999999999988 8877532 434433 334 46666666666665553 344555
No 285
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=24.75 E-value=56 Score=25.53 Aligned_cols=60 Identities=20% Similarity=0.081 Sum_probs=38.9
Q ss_pred CCcccCHHHHHHHHHHHHHhcCCCCEEEecCCcccccCCCCHHHHhhhh---cCC-------------C---CC---HHH
Q 037554 40 GKQIIPAEEHAAKIASARDAIGDSDFVLARADASFVEAPRNDNEANWVW---GHT-------------L---HT---PEE 97 (173)
Q Consensus 40 g~~l~~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i~---g~p-------------~---~~---~~e 97 (173)
+.+|.+.+.+.+--+++.+ +||.+|=+. +.+.++++. ..| . .+ +++
T Consensus 29 ~~pl~~~~~~~~~A~a~~~---------~Ga~~i~~~---~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~ 96 (232)
T 3igs_A 29 GSPLDKPEIVAAMALAAEQ---------AGAVAVRIE---GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDA 96 (232)
T ss_dssp TCTTCSHHHHHHHHHHHHH---------TTCSEEEEE---SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHH
T ss_pred CCCCCCcchHHHHHHHHHH---------CCCeEEEEC---CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHH
Confidence 5678888777655555443 688887664 456666661 122 1 22 578
Q ss_pred HHhCCccEEEechH
Q 037554 98 LKAMGFHLTVHPLT 111 (173)
Q Consensus 98 L~~lGv~~v~~~~~ 111 (173)
+.++|+++|+....
T Consensus 97 ~~~~Gad~V~l~~~ 110 (232)
T 3igs_A 97 LAQAGAAIIAVDGT 110 (232)
T ss_dssp HHHHTCSEEEEECC
T ss_pred HHHcCCCEEEECcc
Confidence 89999999987543
No 286
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=24.71 E-value=3e+02 Score=22.89 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=62.4
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE------------
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL------------ 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I------------ 67 (173)
|.+++..+.+.++++.+.|-..+-|- + |. .++++-+++|+++|++.. +.++.|
T Consensus 161 ~~~~~e~~~~~a~~~~~~G~~~~KlK--v-----g~------~~~~~d~~~v~avR~a~gg~~~~L~vDaN~~w~~~~A~ 227 (391)
T 4e8g_A 161 GIGQPDEIARIAAEKVAEGFPRLQIK--I-----GG------RPVEIDIETVRKVWERIRGTGTRLAVDGNRSLPSRDAL 227 (391)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEE--C-----CS------SCHHHHHHHHHHHHHHHTTTTCEEEEECTTCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEc--C-----CC------CCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCCHHHHH
Confidence 34578888899999999999988762 1 11 246788999999998874 345555
Q ss_pred ------ecCCcccccCC-CCHHHHhhhh---cCC------CCCHHH---HHhCC-ccEEEechH
Q 037554 68 ------ARADASFVEAP-RNDNEANWVW---GHT------LHTPEE---LKAMG-FHLTVHPLT 111 (173)
Q Consensus 68 ------AGAD~ifv~g~-~~~e~i~~i~---g~p------~~~~~e---L~~lG-v~~v~~~~~ 111 (173)
...+. |++-+ .+.+.+.++. ..| ..+..+ +.+.| ++.+..-..
T Consensus 228 ~~~~~L~~~~i-~iEeP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~ 290 (391)
T 4e8g_A 228 RLSRECPEIPF-VLEQPCNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLT 290 (391)
T ss_dssp HHHHHCTTSCE-EEESCSSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHH
T ss_pred HHHHHHhhcCe-EEecCCccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcc
Confidence 44566 88655 4667777772 234 245544 44445 666665443
No 287
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=24.23 E-value=1.4e+02 Score=24.42 Aligned_cols=44 Identities=16% Similarity=0.099 Sum_probs=33.2
Q ss_pred ecCCcccccCCCCHHHHhhh----h-----------c-CCCCCHHHHHhCCccEEEechHH
Q 037554 68 ARADASFVEAPRNDNEANWV----W-----------G-HTLHTPEELKAMGFHLTVHPLTA 112 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i----~-----------g-~p~~~~~eL~~lGv~~v~~~~~~ 112 (173)
+|||.|.+.. -++++++++ . | --.-++.++.+.|+++++.+...
T Consensus 216 aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 216 AGADLVLLDN-FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp TTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEECTHHH
T ss_pred cCCCEEEECC-CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEEChhh
Confidence 8999999866 477887754 1 1 11358899999999999998643
No 288
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=24.17 E-value=1.4e+02 Score=27.77 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHH----HHHHHHHHhcCCCCEEE---------------
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHA----AKIASARDAIGDSDFVL--------------- 67 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~----~kI~Aa~~a~~~~d~~I--------------- 67 (173)
..+..-++.+.++|+.-|+|.|-...-.+. -+. ++.+++. .-++.+.+... .+..|
T Consensus 585 ~a~~~ev~~L~~aG~~~IQiDEP~l~~~l~---~~~-~~~~~~~~~av~~~~~~~~~v~-~~~~i~~HiC~G~~~~i~~~ 659 (765)
T 1u1j_A 585 LAIKDEVEDLEKGGIGVIQIDEAALREGLP---LRK-SEHAFYLDWAVHSFRITNCGVQ-DSTQIHTHMCYSHFNDIIHS 659 (765)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTTSSTTCC---SSG-GGHHHHHHHHHHHHHHHHTTSC-SSSEEEEECSCSCCTTTHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCccccccc---ccC-CCHHHHHHHHHHHHHHHHhcCC-CCCeEEEEeccCCcHHHHHH
Confidence 345677889999999999999976532110 111 3443433 33444443332 24333
Q ss_pred ---ecCCcccccCCC-CHHHHhh
Q 037554 68 ---ARADASFVEAPR-NDNEANW 86 (173)
Q Consensus 68 ---AGAD~ifv~g~~-~~e~i~~ 86 (173)
.++|+++++..+ +.+.++.
T Consensus 660 l~~~~~D~islE~~rs~~e~L~~ 682 (765)
T 1u1j_A 660 IIDMDADVITIENSRSDEKLLSV 682 (765)
T ss_dssp HHTTCCSEEECCBSSSCTTGGGG
T ss_pred HHhCCCCEEEEeCCCCCHHHHHH
Confidence 889999998544 3444433
No 289
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=23.95 E-value=2.5e+02 Score=23.05 Aligned_cols=58 Identities=21% Similarity=0.194 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccC--HHHHHHHHHHHHHhcCCCCEEE-------------ecCC
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIP--AEEHAAKIASARDAIGDSDFVL-------------ARAD 71 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~--~ee~~~kI~Aa~~a~~~~d~~I-------------AGAD 71 (173)
.+..+.++.+.+.|..+|.|- +.. ++ .+.+..-++++++.- +..+++ -|||
T Consensus 53 ~~~~~~~~~~~~sGtDai~VG-S~~------------vt~~~~~~~~~v~~ik~~~-~lPvil~fPP~~g~~~~i~~~aD 118 (286)
T 3vk5_A 53 TEAVEKAAELTRLGFAAVLLA-STD------------YESFESHMEPYVAAVKAAT-PLPVVLHFPPRPGAGFPVVRGAD 118 (286)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE-CSC------------CSSHHHHHHHHHHHHHHHC-SSCEEEECCCBTTTBSCCCTTCS
T ss_pred HHHHHHHHHHHhcCCCEEEEc-cCC------------CCcchHHHHHHHHHHHHhC-CCCEEEECCCCCCCccccccCCC
Confidence 455567888899999999998 542 33 333444445444422 222222 7999
Q ss_pred cccccCC
Q 037554 72 ASFVEAP 78 (173)
Q Consensus 72 ~ifv~g~ 78 (173)
.+|++++
T Consensus 119 a~l~psv 125 (286)
T 3vk5_A 119 ALLLPAL 125 (286)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999886
No 290
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=23.95 E-value=37 Score=29.56 Aligned_cols=28 Identities=29% Similarity=0.291 Sum_probs=22.4
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCc
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPK 33 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pK 33 (173)
++.++..+|+.+. -+..|+|+||=+.|.
T Consensus 114 d~de~~~~v~~l~-~~f~GinvED~T~P~ 141 (439)
T 2dvm_A 114 EPNKFIDIVKAIA-PTFGGINLEDIASPK 141 (439)
T ss_dssp SHHHHHHHHHHTG-GGCSEEEECSCCTTH
T ss_pred CHHHHHHHHHHhC-ccCcEEEEEeCCCch
Confidence 3567778888877 788999999988773
No 291
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=23.90 E-value=61 Score=26.22 Aligned_cols=26 Identities=12% Similarity=0.098 Sum_probs=22.7
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
|-.+|++-|+++|++.|+.|++--|.
T Consensus 76 TGEiS~~mL~d~G~~~ViiGHSERR~ 101 (255)
T 1b9b_A 76 TGEISPLMLQEIGVEYVIVGHSERRR 101 (255)
T ss_dssp TTCCCHHHHHTTTCCEEEESCHHHHH
T ss_pred cCcCCHHHHHHcCCCEEEECchhhcc
Confidence 44689999999999999999988664
No 292
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=23.46 E-value=1.9e+02 Score=21.81 Aligned_cols=18 Identities=17% Similarity=0.032 Sum_probs=12.6
Q ss_pred HHHHHHHhCceEEEeccC
Q 037554 12 TVKDLVAAGAAGCFLEDQ 29 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq 29 (173)
.++.+.++||.+|.+-+.
T Consensus 75 ~~~~~~~aGad~i~vh~~ 92 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAA 92 (218)
T ss_dssp HHHHHHHHTCSEEEEETT
T ss_pred HHHHHHhcCCCEEEEecC
Confidence 457777777777776664
No 293
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=23.14 E-value=32 Score=28.40 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=39.7
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccC-CCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-------------e
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQ-SWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL-------------A 68 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq-~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I-------------A 68 (173)
+...+.+.++++++.||.=|-|-=+ +.| |-.-+|.+|-.+|+.-++++.. +..+-| +
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------ga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT~~~~Va~aAl~a 122 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRP-------GAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKL 122 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC------------------CCHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHh
Confidence 4556677889999999998866542 222 3345666666666655555532 333445 8
Q ss_pred cCCccc-ccCCCCHHHHhh
Q 037554 69 RADASF-VEAPRNDNEANW 86 (173)
Q Consensus 69 GAD~if-v~g~~~~e~i~~ 86 (173)
|||+|- |.+..+++-+..
T Consensus 123 Ga~iINdVsg~~d~~m~~v 141 (294)
T 2dqw_A 123 GAHLLNDVTGLRDERMVAL 141 (294)
T ss_dssp TCSEEECSSCSCCHHHHHH
T ss_pred CCCEEEECCCCCChHHHHH
Confidence 999876 444445544433
No 294
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=22.96 E-value=57 Score=26.70 Aligned_cols=46 Identities=9% Similarity=0.071 Sum_probs=29.5
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
+-+++..++|+..|+|-+.+.+- |...+-=.+++|..++++.+++.
T Consensus 85 ~~i~~a~~~g~~~v~i~~~~sd~---~~~~~l~~s~~e~l~~~~~~v~~ 130 (307)
T 1ydo_A 85 RGLENALEGGINEACVFMSASET---HNRKNINKSTSESLHILKQVNND 130 (307)
T ss_dssp HHHHHHHHHTCSEEEEEEESSHH---HHHTTTCSCHHHHHHHHHHHHHH
T ss_pred HhHHHHHhCCcCEEEEEeecCHH---HHHHHhCCCHHHHHHHHHHHHHH
Confidence 45778888999999999877642 11011113677777776666554
No 295
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=22.81 E-value=2.5e+02 Score=23.24 Aligned_cols=50 Identities=16% Similarity=0.265 Sum_probs=37.8
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
++..+.+.++++.++|-.+|-| ++||. +++.-+++|+++|++.. +.++.|
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKi-------k~g~~------~~~~~~e~v~avR~avg~d~~l~v 212 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKL-------KVGQP------DGALDIARVTAVRKHLGDAVPLMV 212 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEE-------ECCCS------CHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-------ecCCC------CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6778889999999999999988 23331 46788899999998863 455655
No 296
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=22.75 E-value=74 Score=26.02 Aligned_cols=27 Identities=11% Similarity=-0.102 Sum_probs=23.2
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYAS 116 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~aa 116 (173)
|-.+|++-|+++|++.|++|++--|..
T Consensus 100 TGEIS~~mLkd~G~~~VIiGHSERR~~ 126 (275)
T 3kxq_A 100 TGDISAFMLKEAGASHVIIGHSERRTV 126 (275)
T ss_dssp TTCCCHHHHHHHTCSEEEESCHHHHHH
T ss_pred cCcCCHHHHHHcCCCEEEECchhhccc
Confidence 446899999999999999999886653
No 297
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=22.71 E-value=2.3e+02 Score=23.51 Aligned_cols=53 Identities=25% Similarity=0.284 Sum_probs=39.3
Q ss_pred CCCChHHHHHHHHHHHHh-CceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 2 GGGNALNVQRTVKDLVAA-GAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~a-Gvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
|++++..+.+.++++.+. |-..+-|- + |. .++++-+++|+++|++.. +.++.|
T Consensus 164 g~~~~e~~~~~a~~~~~~~G~~~~KlK--v-----G~------~~~~~d~~~v~avR~a~G~~~~l~v 218 (383)
T 3toy_A 164 GVLDARDDERTLRTACDEHGFRAIKSK--G-----GH------GDLATDEAMIKGLRALLGPDIALML 218 (383)
T ss_dssp SSCCHHHHHHHHHHHHHTSCCCEEEEE--C-----CS------SCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCHHHHHHHHHHHHHccCCcEEEEe--c-----CC------CCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 556788889999999998 99888762 1 11 256788999999999864 445555
No 298
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=22.68 E-value=3e+02 Score=22.04 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=42.2
Q ss_pred HHHHHhcCCCCEEEecCCcccccCCCCHHHHhhhhcCCCCCHHHHHhCCccEEEechHHHHHH-HHHHH
Q 037554 54 ASARDAIGDSDFVLARADASFVEAPRNDNEANWVWGHTLHTPEELKAMGFHLTVHPLTALYAS-ARALV 121 (173)
Q Consensus 54 ~Aa~~a~~~~d~~IAGAD~ifv~g~~~~e~i~~i~g~p~~~~~eL~~lGv~~v~~~~~~~~aa-~~a~~ 121 (173)
+++++...+.+++=.|=..-++-|.++.+++.++- .-..+.|.+.|++.+.++.....+. +..++
T Consensus 41 ~~i~~~lP~e~~iy~~D~a~~PYG~ks~e~i~~~~---~~~~~~L~~~g~d~IVIACNTa~~~al~~lr 106 (274)
T 3uhf_A 41 KSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFC---LEALDFFEQFQIDMLIIACNTASAYALDALR 106 (274)
T ss_dssp HHHHHTTCCSEEEEEECTTTCCCTTSCHHHHHHHH---HHHHHHHTTSCCSEEEECCHHHHHHSHHHHH
T ss_pred HHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHH---HHHHHHHHHCCCCEEEEeCCChhHHHHHHHH
Confidence 44444444556655676677777888998887762 1133677788888888887776653 45544
No 299
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=22.54 E-value=2.2e+02 Score=23.62 Aligned_cols=91 Identities=11% Similarity=0.115 Sum_probs=59.5
Q ss_pred ChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE----------------
Q 037554 5 NALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL---------------- 67 (173)
Q Consensus 5 ~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I---------------- 67 (173)
++..+.+.++++.++|-.+|-|- +|| -+++.-+++|+++|++.. +.++.|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik-------~g~------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~ 211 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIK-------VGH------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLV 211 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE-------CCC------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-------cCC------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHH
Confidence 57778888899999999998862 344 245778899999998763 334444
Q ss_pred ----ecCCcccccCCC---CHHHHhhhh----cCC------CCCHHHHHh---CC-ccEEEec
Q 037554 68 ----ARADASFVEAPR---NDNEANWVW----GHT------LHTPEELKA---MG-FHLTVHP 109 (173)
Q Consensus 68 ----AGAD~ifv~g~~---~~e~i~~i~----g~p------~~~~~eL~~---lG-v~~v~~~ 109 (173)
+|.+..|++-+- +.+.++++. ..| . +.+++.+ .| ++.|...
T Consensus 212 ~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 212 AIREAGHDLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred HHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 457777776542 455555552 123 3 6655544 34 7777776
No 300
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=22.48 E-value=2.8e+02 Score=21.67 Aligned_cols=22 Identities=9% Similarity=0.155 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCceEEEeccCC
Q 037554 9 VQRTVKDLVAAGAAGCFLEDQS 30 (173)
Q Consensus 9 v~rtv~~~~~aGvagi~iEDq~ 30 (173)
+.+.++.+.++|+.||.+=|-.
T Consensus 111 ~~~~~~~~~~aGadgii~~d~~ 132 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVADVP 132 (268)
T ss_dssp HHHHHHHHHHHTCCEEEETTCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCC
Confidence 3688899999999999998865
No 301
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=22.43 E-value=2.4e+02 Score=23.05 Aligned_cols=97 Identities=12% Similarity=0.050 Sum_probs=61.0
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE-------------
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL------------- 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I------------- 67 (173)
|.+++..+.+.++++.+.|...+-|- .| .++++-+++|+++|++.. +.++.|
T Consensus 137 ~~~~~~~~~~~a~~~~~~G~~~~K~K-------~G-------~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~ 202 (356)
T 3ro6_B 137 GIKPVEETLAEAREHLALGFRVLKVK-------LC-------GDEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLR 202 (356)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEE-------CC-------SCHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEE-------eC-------CCHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHH
Confidence 34577888889999999999888763 11 157888999999999873 445555
Q ss_pred -----ecCCcccccCCC---CHHHHhhhh---cCC------CCCH---HHHHhCC--ccEEEechHH
Q 037554 68 -----ARADASFVEAPR---NDNEANWVW---GHT------LHTP---EELKAMG--FHLTVHPLTA 112 (173)
Q Consensus 68 -----AGAD~ifv~g~~---~~e~i~~i~---g~p------~~~~---~eL~~lG--v~~v~~~~~~ 112 (173)
.-.+..|++-+- +.+.++++. +.| ..+. .++.+.| ++.|..-..-
T Consensus 203 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 203 LDRLVQELGIEFIEQPFPAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp HHHHHHHTTCCCEECCSCTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred HHHHHHhcCCCEEECCCCCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 233445555432 556666661 123 2444 4455554 7777765443
No 302
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=22.42 E-value=75 Score=25.94 Aligned_cols=44 Identities=14% Similarity=0.047 Sum_probs=31.6
Q ss_pred ecCCcccccCCCCHHHHhhh-h---c-CC--------CCCHHHHHhCCccEEEechHH
Q 037554 68 ARADASFVEAPRNDNEANWV-W---G-HT--------LHTPEELKAMGFHLTVHPLTA 112 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-~---g-~p--------~~~~~eL~~lGv~~v~~~~~~ 112 (173)
+|||.|.++.+ +++++++. . + .| .-++.++.+.|+..|+.+...
T Consensus 215 aGaD~I~ld~~-~~~~~k~av~~v~~~ipi~AsGGIt~eni~~~a~tGvD~IsVgs~~ 271 (286)
T 1x1o_A 215 AGADLILLDNF-PLEALREAVRRVGGRVPLEASGNMTLERAKAAAEAGVDYVSVGALT 271 (286)
T ss_dssp HTCSEEEEESC-CHHHHHHHHHHHTTSSCEEEESSCCHHHHHHHHHHTCSEEECTHHH
T ss_pred cCCCEEEECCC-CHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEEcHHH
Confidence 89999998764 66666655 1 1 23 236688899999999997543
No 303
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=22.37 E-value=67 Score=25.98 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=22.8
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
|-.+|++-|+++|++.|+.|++--|.
T Consensus 76 TGEiS~~mL~d~G~~~ViiGHSERR~ 101 (257)
T 2yc6_A 76 TGETSVEMLQDMGLKHVIVGHSERRR 101 (257)
T ss_dssp TTCCCHHHHHHTTCCEEEESCHHHHH
T ss_pred cCccCHHHHHHcCCCEEEECchhhcc
Confidence 44689999999999999999988664
No 304
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=22.35 E-value=1.3e+02 Score=24.27 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=25.2
Q ss_pred ecCCcc-----cccCCCCHHHHhhhh---c-----------CCCCCHHHHHhCCccEEEe
Q 037554 68 ARADAS-----FVEAPRNDNEANWVW---G-----------HTLHTPEELKAMGFHLTVH 108 (173)
Q Consensus 68 AGAD~i-----fv~g~~~~e~i~~i~---g-----------~p~~~~~eL~~lGv~~v~~ 108 (173)
+|||.| |.++-.+.+.++-+. + ...-+..++-++|..|+-.
T Consensus 185 aGADfVKTSTGf~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGt 244 (260)
T 3r12_A 185 AGAHFVKTSTGFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGT 244 (260)
T ss_dssp TTCSEEECCCSSSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred hCcCEEEcCCCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeec
Confidence 899977 444445666666551 1 1123556778889888644
No 305
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=22.24 E-value=61 Score=26.08 Aligned_cols=26 Identities=8% Similarity=0.125 Sum_probs=22.7
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
|-.+|++-|+++|++.|+.|++--|.
T Consensus 74 TGEiS~~mL~d~G~~~ViiGHSERR~ 99 (247)
T 1ney_A 74 TGENSVDQIKDVGAKYVILGHSERRS 99 (247)
T ss_dssp TTCCCHHHHHHTTCCEEEESCHHHHH
T ss_pred cCccCHHHHHHcCCCEEEECChhhcc
Confidence 44689999999999999999988664
No 306
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=22.24 E-value=2.2e+02 Score=23.49 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=36.4
Q ss_pred CChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE
Q 037554 4 GNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL 67 (173)
Q Consensus 4 G~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I 67 (173)
+++..+.+.++++.++|..+|-|- +|. +++...++|+++|++..+..+.|
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik-------~g~-------~~~~~~e~v~avr~a~gd~~l~v 195 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLK-------VGR-------GEKLDLEITAAVRGEIGDARLRL 195 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEE-------CCS-------CHHHHHHHHHHHHTTSTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEC-------cCC-------CHHHHHHHHHHHHHHcCCcEEEE
Confidence 467778889999999999999872 221 56788899999988764233333
No 307
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=22.14 E-value=2.4e+02 Score=22.70 Aligned_cols=48 Identities=27% Similarity=0.250 Sum_probs=34.2
Q ss_pred HHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHh
Q 037554 11 RTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDA 59 (173)
Q Consensus 11 rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a 59 (173)
.....-..+||.|+.||=...|.+.-. .+++-++++++..-++..+..
T Consensus 226 ~~~~aAva~Ga~Gl~IE~H~~~d~a~~-D~~~sl~p~~~~~lv~~i~~~ 273 (276)
T 1vs1_A 226 ALAKAGLAAGADGLIVEVHPNPEEALS-DAKQQLTPGEFARLMGELRWH 273 (276)
T ss_dssp HHHHHHHHTTCSEEEEEBCSSGGGCSS-CGGGCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEecCCcccCCC-chhcCCCHHHHHHHHHHHHHH
Confidence 334445779999999998766655322 566777888888877777654
No 308
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=22.06 E-value=1.3e+02 Score=24.91 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 7 LNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 7 ~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
..+.+.++++.+.|..+|-|- .||.. -++++-+++|+++|++.. +.++.|
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk-------~g~~g----~~~~~d~~~v~avR~a~g~~~~l~v 198 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFG-------GGVMG----DDPDTDYAIVKAVREAAGPEMEVQI 198 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEE-------CTTTT----SCHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEec-------cCCCC----CCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 788899999999999998762 33322 146888999999998864 334444
No 309
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=22.03 E-value=2.1e+02 Score=23.92 Aligned_cols=63 Identities=14% Similarity=0.073 Sum_probs=40.5
Q ss_pred CCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCC-cccCHHHHHHHHHHHHHhcC-CCCEEE
Q 037554 3 GGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGK-QIIPAEEHAAKIASARDAIG-DSDFVL 67 (173)
Q Consensus 3 yG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~-~l~~~ee~~~kI~Aa~~a~~-~~d~~I 67 (173)
+.++..+.+.++++.+.|...+-|- .+...+++.... ..-++++-+++|+++|++.. +.++.|
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~KlK--~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~v 213 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAVKFD--PAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLF 213 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEC--CSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeC--CCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 3467889999999999999999883 221111111110 11236788999999999864 345555
No 310
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=21.99 E-value=1.5e+02 Score=24.41 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=57.0
Q ss_pred HHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC--CCCEEE-ecCCcccccCCCCHHHHhhhh
Q 037554 12 TVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG--DSDFVL-ARADASFVEAPRNDNEANWVW 88 (173)
Q Consensus 12 tv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~--~~d~~I-AGAD~ifv~g~~~~e~i~~i~ 88 (173)
..+.+.++|+.-|.+|=...-+ |....+.-++.++..++|+..+++.. ++|+++ .|+ -++.+++++..+
T Consensus 175 eA~amA~agpDiI~~h~glT~g--glIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~g-----GpIstpeDv~~~- 246 (286)
T 2p10_A 175 DAVAMAKAGADILVCHMGLTTG--GAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHG-----GPIANPEDARFI- 246 (286)
T ss_dssp HHHHHHHHTCSEEEEECSCC-----------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEES-----TTCCSHHHHHHH-
T ss_pred HHHHHHHcCCCEEEECCCCCCC--CcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecC-----CCCCCHHHHHHH-
Confidence 4567789999999988653210 01111445789998888888888753 577553 332 134566666443
Q ss_pred cCCCCCHHHHHhC--CccEEEechHHHHHH-HHHHHHHHHHHHH
Q 037554 89 GHTLHTPEELKAM--GFHLTVHPLTALYAS-ARALVDVLKTLKE 129 (173)
Q Consensus 89 g~p~~~~~eL~~l--Gv~~v~~~~~~~~aa-~~a~~~~~~~l~~ 129 (173)
-++ |..=+.-+++..++- -.++.+..+.++.
T Consensus 247 ----------l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 247 ----------LDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp ----------HHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------HhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHh
Confidence 233 555555666665554 4455555555554
No 311
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=21.68 E-value=2.3e+02 Score=24.15 Aligned_cols=17 Identities=29% Similarity=0.552 Sum_probs=14.2
Q ss_pred HHHHHHHHHhCceEEEe
Q 037554 10 QRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~i 26 (173)
.+.++.++++||.+|.+
T Consensus 195 ~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 195 EEATKELIENGADGIKV 211 (400)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 35668889999999998
No 312
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=21.52 E-value=64 Score=26.38 Aligned_cols=27 Identities=7% Similarity=-0.064 Sum_probs=23.4
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYAS 116 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~aa 116 (173)
|-.+|++-|+++|++.|++|++--|..
T Consensus 100 TGEISa~MLkd~G~~~VIiGHSERR~~ 126 (272)
T 4g1k_A 100 TGEVAAGMVAEFGAAYAIVGHSERRAY 126 (272)
T ss_dssp TTCCCHHHHHTTTCCEEEESCHHHHHH
T ss_pred cCcCCHHHHHHcCCCEEEECchhcccc
Confidence 456899999999999999999986653
No 313
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=21.48 E-value=1.9e+02 Score=27.34 Aligned_cols=54 Identities=11% Similarity=-0.015 Sum_probs=43.5
Q ss_pred CCCChHHHHHHHHHHHHhCc--eEEEeccCCCCccCCCCCCC-cccCHHHHHHHHHH
Q 037554 2 GGGNALNVQRTVKDLVAAGA--AGCFLEDQSWPKKCGHMHGK-QIIPAEEHAAKIAS 55 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGv--agi~iEDq~~pKrcg~~~g~-~l~~~ee~~~kI~A 55 (173)
||.+...+.+.++++.+.|+ ..+.+.+.-..++|.+.-.+ ..=++.+|+++|+.
T Consensus 300 ~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp~~mv~~Lh~ 356 (875)
T 3l4y_A 300 EYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKGFPEFVNELHN 356 (875)
T ss_dssp CCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCceEEEccchhcCCCceeeChhhCCCHHHHHHHHHH
Confidence 67788999999999999998 99999888777777776443 33368889988874
No 314
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=21.22 E-value=2.7e+02 Score=23.96 Aligned_cols=17 Identities=29% Similarity=0.472 Sum_probs=14.6
Q ss_pred HHHHHHHHHhCceEEEe
Q 037554 10 QRTVKDLVAAGAAGCFL 26 (173)
Q Consensus 10 ~rtv~~~~~aGvagi~i 26 (173)
.+.++.++++||.+|.+
T Consensus 307 ~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 307 AAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 35678899999999999
No 315
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=21.12 E-value=1.8e+02 Score=25.08 Aligned_cols=94 Identities=14% Similarity=0.010 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE--------------ecCCcc
Q 037554 8 NVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL--------------ARADAS 73 (173)
Q Consensus 8 ~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I--------------AGAD~i 73 (173)
...+.++.+.++|+.+|+|- .. |||. ....+.|+++++.-.+..++. +|||.|
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~-~~----~G~~--------~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I 321 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLD-SS----QGNS--------VYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGL 321 (514)
T ss_dssp THHHHHHHHHHTTCSEEEEC-CS----CCCS--------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEE
T ss_pred hhHHHHHHHHHcCCCEEEee-cc----CCcc--------hhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEE
Confidence 45678888999999999983 21 3332 223344555555432222222 899998
Q ss_pred cc---cCCC---------------CHHHHhhh-h--cCCC---------CCHHHHHhCCccEEEechHHHH
Q 037554 74 FV---EAPR---------------NDNEANWV-W--GHTL---------HTPEELKAMGFHLTVHPLTALY 114 (173)
Q Consensus 74 fv---~g~~---------------~~e~i~~i-~--g~p~---------~~~~eL~~lGv~~v~~~~~~~~ 114 (173)
-+ +|-. ....+.++ . +.|. -++..+-.+|.+.|.+|..++.
T Consensus 322 ~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~ 392 (514)
T 1jcn_A 322 RVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAA 392 (514)
T ss_dssp EECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred EECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHc
Confidence 66 1210 12333333 1 2231 2456677899999999976543
No 316
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=21.10 E-value=3.4e+02 Score=22.12 Aligned_cols=114 Identities=11% Similarity=0.068 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE------------------
Q 037554 6 ALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------------ 67 (173)
Q Consensus 6 ~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------------ 67 (173)
..+..+.++.|.++|+.-|-+- +|+ .++.++ +.++.+++...+..+..
T Consensus 27 ~~~Kl~ia~~L~~~Gv~~IE~g---~p~----------~~~~d~-e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ 92 (325)
T 3eeg_A 27 TEEKIIVAKALDELGVDVIEAG---FPV----------SSPGDF-NSVVEITKAVTRPTICALTRAKEADINIAGEALRF 92 (325)
T ss_dssp TTHHHHHHHHHHHHTCSEEEEE---CTT----------SCHHHH-HHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEe---CCC----------CCHhHH-HHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcc
Confidence 4567788999999999977653 342 344444 44555555444433322
Q ss_pred ecCCcccccCCCCHHHHhhh-hcCC-------CCCHHHHHhCCccEEEechHHHHHHHHHHHHHHHHHHHcCCc
Q 037554 68 ARADASFVEAPRNDNEANWV-WGHT-------LHTPEELKAMGFHLTVHPLTALYASARALVDVLKTLKESGTT 133 (173)
Q Consensus 68 AGAD~ifv~g~~~~e~i~~i-~g~p-------~~~~~eL~~lGv~~v~~~~~~~~aa~~a~~~~~~~l~~~g~~ 133 (173)
+|+|.|-+....+.-..+.- +-++ ...++..++.|...........+.-..-+.+.++.+.+.|-.
T Consensus 93 ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~ 166 (325)
T 3eeg_A 93 AKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGAD 166 (325)
T ss_dssp CSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCC
Confidence 36776554443444333221 1011 123455677776654443333344455566666666666643
No 317
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=20.94 E-value=2.8e+02 Score=23.07 Aligned_cols=72 Identities=11% Similarity=0.210 Sum_probs=52.0
Q ss_pred CCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcC-CCCEEE-------------
Q 037554 2 GGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIG-DSDFVL------------- 67 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~-~~d~~I------------- 67 (173)
|++++..+.+.++++.+.|-..+-|- . | .++++-+++|+++|++.. +.++.|
T Consensus 139 g~~~~e~~~~~a~~~~~~Gf~~~KlK--~---------g---~~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~ 204 (379)
T 3r0u_A 139 SCGNVAETIQNIQNGVEANFTAIKVK--T---------G---ADFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQ 204 (379)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEEE--C---------S---SCHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEeee--c---------C---CCHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHH
Confidence 45678888889999999999888762 1 1 157888999999999875 456666
Q ss_pred -----ec--CCcccccCCC---CHHHHhhh
Q 037554 68 -----AR--ADASFVEAPR---NDNEANWV 87 (173)
Q Consensus 68 -----AG--AD~ifv~g~~---~~e~i~~i 87 (173)
.. .+..|++-+- +.+.++++
T Consensus 205 ~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l 234 (379)
T 3r0u_A 205 FIEEINKYSLNVEIIEQPVKYYDIKAMAEI 234 (379)
T ss_dssp HHHHHHTSCCCEEEEECCSCTTCHHHHHHH
T ss_pred HHHHHhhcCCCcEEEECCCCcccHHHHHHH
Confidence 33 6777886553 45666666
No 318
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=20.75 E-value=59 Score=26.21 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=22.9
Q ss_pred CCCCCHHHHHhCCccEEEechHHHHH
Q 037554 90 HTLHTPEELKAMGFHLTVHPLTALYA 115 (173)
Q Consensus 90 ~p~~~~~eL~~lGv~~v~~~~~~~~a 115 (173)
|-.+|++-|+++|++.|+.|++--|.
T Consensus 74 TGEiS~~mL~d~G~~~ViiGHSERR~ 99 (252)
T 2btm_A 74 TGEVSPVMLKDLGVTYVILGHSERRQ 99 (252)
T ss_dssp TTCCCHHHHHHHTCCEEEESCHHHHH
T ss_pred CCcCCHHHHHHcCCCEEEeCchhccc
Confidence 44689999999999999999988665
No 319
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=20.65 E-value=1.4e+02 Score=23.21 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=40.7
Q ss_pred CCCCChHHHHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEEecCCcccccCC
Q 037554 1 TGGGNALNVQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVLARADASFVEAP 78 (173)
Q Consensus 1 tGyG~~~~v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~IAGAD~ifv~g~ 78 (173)
+|.|+ +++.+-+++..- ...-+++-|+.... .| ..+.++...++..+.+.... .|+|+|.+.+-
T Consensus 8 SG~Gg-ltv~~~l~~~~P-~~~~iy~~D~~~~p-----yG--~~s~~~i~~~~~~~~~~L~~-----~g~d~iviaCn 71 (254)
T 1b73_A 8 SGVGG-LTVLKAIRNRYR-KVDIVYLGDTARVP-----YG--IRSKDTIIRYSLECAGFLKD-----KGVDIIVVACN 71 (254)
T ss_dssp SSSGG-GTHHHHHHHHST-TCEEEEEECTTTCC-----CT--TSCHHHHHHHHHHHHHHHHT-----TTCSEEEECCH
T ss_pred CCccH-HHHHHHHHHhCC-CCcEEEeecCCCCC-----CC--cCCHHHHHHHHHHHHHHHHH-----CCCCEEEEeCc
Confidence 57776 456666666543 45678889986421 12 34678888887766544322 68888888764
No 320
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=20.63 E-value=2.2e+02 Score=24.81 Aligned_cols=73 Identities=14% Similarity=0.040 Sum_probs=44.2
Q ss_pred CCCC-hHH-HHHHHHHHHHhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhcCCCCEEE------------
Q 037554 2 GGGN-ALN-VQRTVKDLVAAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAIGDSDFVL------------ 67 (173)
Q Consensus 2 GyG~-~~~-v~rtv~~~~~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~~~~d~~I------------ 67 (173)
||.. +.+ +...++...++|+..|+|=|.+.+ + +.+..-|+++++.-....+-|
T Consensus 93 G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd----------~---~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~ 159 (464)
T 2nx9_A 93 GYRHYADDVVDTFVERAVKNGMDVFRVFDAMND----------V---RNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQT 159 (464)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCC----------T---HHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHH
T ss_pred CcccccchhhHHHHHHHHhCCcCEEEEEEecCH----------H---HHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHH
Confidence 4443 344 467888999999999999987643 1 233334444444311111111
Q ss_pred ----------ecCCcccc---cCCCCHHHHhhh
Q 037554 68 ----------ARADASFV---EAPRNDNEANWV 87 (173)
Q Consensus 68 ----------AGAD~ifv---~g~~~~e~i~~i 87 (173)
+|||.|.+ -|.-++.++.++
T Consensus 160 ~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~l 192 (464)
T 2nx9_A 160 WVDVAQQLAELGVDSIALKDMAGILTPYAAEEL 192 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHH
Confidence 89998876 356677777666
No 321
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=20.56 E-value=72 Score=26.83 Aligned_cols=21 Identities=19% Similarity=0.195 Sum_probs=14.0
Q ss_pred HHHHhCCccEEEechHHHHHH
Q 037554 96 EELKAMGFHLTVHPLTALYAS 116 (173)
Q Consensus 96 ~eL~~lGv~~v~~~~~~~~aa 116 (173)
.++-.+|.+.|.+|..+++..
T Consensus 294 ~kal~~GAdaV~iGr~~l~~~ 314 (380)
T 1p4c_A 294 VKALALGAEAVLLGRATLYGL 314 (380)
T ss_dssp HHHHHTTCSCEEESHHHHHHH
T ss_pred HHHHHhCCcHhhehHHHHHHH
Confidence 344457888888887776553
No 322
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=20.44 E-value=2.2e+02 Score=27.03 Aligned_cols=54 Identities=9% Similarity=-0.038 Sum_probs=43.4
Q ss_pred CCCChHHHHHHHHHHHHhCc--eEEEeccCCCCccCCCCCCC-cccCHHHHHHHHHH
Q 037554 2 GGGNALNVQRTVKDLVAAGA--AGCFLEDQSWPKKCGHMHGK-QIIPAEEHAAKIAS 55 (173)
Q Consensus 2 GyG~~~~v~rtv~~~~~aGv--agi~iEDq~~pKrcg~~~g~-~l~~~ee~~~kI~A 55 (173)
||.+...|.+.++++.+.|+ ..+.+.+.-..++|.+.-.+ ..=++.+|+.+|+.
T Consensus 328 ~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp~~mv~~Lh~ 384 (898)
T 3lpp_A 328 NYKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFNGLPQFVQDLHD 384 (898)
T ss_dssp CCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTTTHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCceeeEeccccccCCCcceEChhhCCCHHHHHHHHHH
Confidence 57788999999999999999 99999887777777776443 33368899988874
No 323
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=20.02 E-value=1.5e+02 Score=24.50 Aligned_cols=32 Identities=16% Similarity=-0.050 Sum_probs=24.8
Q ss_pred HhCceEEEeccCCCCccCCCCCCCcccCHHHHHHHHHHHHHhc
Q 037554 18 AAGAAGCFLEDQSWPKKCGHMHGKQIIPAEEHAAKIASARDAI 60 (173)
Q Consensus 18 ~aGvagi~iEDq~~pKrcg~~~g~~l~~~ee~~~kI~Aa~~a~ 60 (173)
++|+.-|+|-|.++ +..+++..+.|++.++.-
T Consensus 154 ~~G~~~i~l~Dt~G-----------~~~P~~~~~lv~~l~~~~ 185 (320)
T 3dxi_A 154 DKIADLFCMVDSFG-----------GITPKEVKNLLKEVRKYT 185 (320)
T ss_dssp TTTCSEEEEECTTS-----------CCCHHHHHHHHHHHHHHC
T ss_pred hCCCCEEEECcccC-----------CCCHHHHHHHHHHHHHhC
Confidence 57888999999874 456788888888887764
Done!