BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037561
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 61 KIVVGG-SDNWHF----GFNYSVWAFQNAPFYVNDVLVFKYDPPNDTVFPHSVYQLPNLW 115
++ VGG S +W ++++ WA Q A F V D +VF+Y+ D+V +
Sbjct: 30 EVTVGGKSGDWKIPPSSSYSFTEWA-QKARFKVGDFIVFRYESGKDSVLEVTKE------ 82
Query: 116 SYLRCDLSRAKMIANTTQGGGDGFEFVLKRWLPYYFACGERGGFHCREGRMKFMVL 171
+Y C+ + +AN T G + L R P+YF G G HC +G+ +V+
Sbjct: 83 AYNSCNTTNP--LANYTDGET---KVKLDRSGPFYFISGANG--HCEKGQKLSLVV 131
>sp|P58582|GSHB_YERPE Glutathione synthetase OS=Yersinia pestis GN=gshB PE=3 SV=1
Length = 319
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 63 VVGGSDNWHFGFNYSVWAFQNAPFYVNDVLVFKYDPPNDTVFPHSVYQLPNLWSYLRCDL 122
V DNW +S A Q+ P Y DV++ + DPP DT F ++ Y L
Sbjct: 59 VKQDKDNW-----FSFGAEQDLPLYDLDVILMRKDPPFDTEFIYATYILERAE------- 106
Query: 123 SRAKMIANTTQGGGDGFEFVLKRWLP 148
+ ++ N Q D E + W P
Sbjct: 107 DKGTLVVNKPQSLRDCNEKLFTAWFP 132
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 37.0 bits (84), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 59 PSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVLVFKYDPPNDTVFPHSVYQLPNLWSYL 118
P + V + W G +YS WA F V D+L FKY H+V + + Y
Sbjct: 25 PGAVAVTYTIEWTTGVDYSGWA-TGKTFRVGDILEFKYGS------SHTV-DVVDKAGYD 76
Query: 119 RCDLSRAKMIANTTQGGGDG-FEFVLKRWLPYYFACGERGGFHCRE-GRMKFMV 170
CD S ++T+ DG + LK YF C G HCR G MK V
Sbjct: 77 GCDAS------SSTENHSDGDTKIDLKTVGINYFICSTPG--HCRTNGGMKLAV 122
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 19/109 (17%)
Query: 64 VGGSDNWHFGFNYSVWAFQNAPFYVNDVLVFKYDPPNDTV--FPHSVYQLPNLWSYLRCD 121
VG + W G +YS WA + F V D LVF Y TV S Y+ + + D
Sbjct: 29 VGDTSGWVIGGDYSTWA-SDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTD 87
Query: 122 LSRAKMIANTTQGGGDGFEFVLKRWLPYYFACGERGGFHCREGRMKFMV 170
+ A I LK+ +YF CG G H G MK +
Sbjct: 88 STGATTIP-------------LKKAGKHYFICGVPG--H-STGGMKLSI 120
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 61 KIVVGG-SDNWHF----GFNYSVWAFQNAPFYVNDVLVFKYDPPNDTVFPHSVYQLPNLW 115
+I+VGG + +W + + WA ++ F V D LV+KYD D SV Q+
Sbjct: 25 EIIVGGKTSSWKIPSSPSESLNKWA-ESLRFRVGDTLVWKYDEEKD-----SVLQVTK-D 77
Query: 116 SYLRCDLSRAKMIANTTQGGGDGFEFVLKRWLPYYFACGERGGFHCREGRMKFMVL 171
+Y+ C+ + AN + G + L+R PY+F G + +C EG +V+
Sbjct: 78 AYINCNTTNPA--ANYSNGDT---KVKLERSGPYFFISGSKS--NCVEGEKLHIVV 126
>sp|O02849|PADI3_SHEEP Protein-arginine deiminase type-3 OS=Ovis aries GN=PADI3 PE=1 SV=1
Length = 664
Score = 31.2 bits (69), Expect = 4.2, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 70 WHFGFNYSVWAFQNAPFYVNDVLVFKYDP-PNDTVFP--HSVYQLPNLWSYLRCDLS 123
WHF + N+P VND + FK+ P +T P ++V L + L CDL+
Sbjct: 68 WHFDMGSQIVVVMNSPSNVNDTVTFKFPTIPAETPRPLAYAVLYLTCVDITLDCDLN 124
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 30.0 bits (66), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 60 SKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVLVFKYDPPNDTVFPHSVYQLPNLWSYLR 119
K VG + W+ NY++WA Q FY+ D L F +D H++ ++ N Y
Sbjct: 27 KKYTVGENKFWNPNINYTIWA-QGKHFYLGDWLYFVFDRNQ-----HNILEV-NKTDYEG 79
Query: 120 CDLSRAKMIANTTQGGGDGFEFVLKRWLPYYFACGERGGFHCREGRMKFMVLP 172
C I N T+G G L + YY G+ G + + +K LP
Sbjct: 80 CIADHP--IRNWTRGAGRDI-VTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLP 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.485
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,569,844
Number of Sequences: 539616
Number of extensions: 3705260
Number of successful extensions: 7467
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7450
Number of HSP's gapped (non-prelim): 38
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)