BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037566
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana
GN=VEP1 PE=1 SV=1
Length = 388
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/366 (43%), Positives = 221/366 (60%), Gaps = 20/366 (5%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ G SLAE L + T PGGPWKVYG ARRP P+W +D YI D D+ DT KLS
Sbjct: 37 IVGNSLAEILPLSDT-PGGPWKVYGVARRPRPTWNADHPID-YIQCDVSDAEDTRSKLSP 94
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ +VTH+F+V + +SE N N +M +NV+ ++ LRHV L GTKHY+
Sbjct: 95 LT-DVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPY---APNLRHVCLQTGTKHYL 150
Query: 121 GP---VFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI---AASYSPAVTYSVHRSS 174
GP V P HDPPF ED RL NFYY EDI VT+S+HR +
Sbjct: 151 GPFTNVDGPR-------HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPN 203
Query: 175 IIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAA 234
+I G S SL N + TL VYA IC+H+G P + G+K WE F SD+ ++AEQQIWAA
Sbjct: 204 MIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIWAA 263
Query: 235 TTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEI 294
AKN+AFNC N D+F WK LWK+L+E F +E F+E + VEMMK K +W+E+
Sbjct: 264 VDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGFEEGKNLGLVEMMKGKERVWEEM 323
Query: 295 VEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLR 354
V+++ L + K+EE+ + + +L ++ + SMNKS+E+GF GF ++ S +W+ K +
Sbjct: 324 VKENQLQEKKLEEVGVWWFADVILGVE-GMIDSMNKSKEYGFLGFRNSNNSFISWIDKYK 382
Query: 355 EMKIIP 360
KI+P
Sbjct: 383 AFKIVP 388
>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1
SV=1
Length = 389
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 215/363 (59%), Gaps = 13/363 (3%)
Query: 1 MAGLSLAEALKNNPTIPGGPWKVYGTARRPPPSWFPSSHVDHYITFDALDSTDTTQKLSS 60
+ G SLAE L T PGGPWKVYG ARR P+W + ++ Y+ D D D+ KLS
Sbjct: 37 IIGNSLAEILPLADT-PGGPWKVYGVARRTRPAWHEDNPIN-YVQCDISDPDDSQAKLSP 94
Query: 61 ISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMSVVVDSNKGRSRLRHVTLLMGTKHYM 120
++ +VTH+F+V + +E+ N NS MF+NV+ V+ + L+H++L G KHYM
Sbjct: 95 LT-DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNC---PNLKHISLQTGRKHYM 150
Query: 121 GPVFDPSLVGQLIGHDPPFKEDSLRLPFPNFYYAVEDI---AASYSPAVTYSVHRSSIII 177
GP G++ HDPP+ ED RL + NFYY +EDI +T+SVHR I
Sbjct: 151 GPF---ESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIF 207
Query: 178 GASSRSLNNSLLTLAVYATICRHQGLPFRYLGNKYTWEHFCDMSDSRVLAEQQIWAATTD 237
G S S+ N + TL VYA IC+H+G R+ G K W+ + D SD+ ++AE IWAA
Sbjct: 208 GFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP 267
Query: 238 RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDAVEMMKEKGEIWDEIVEK 297
AKN+AFN +NGDVF WK WK+L+E F V ++E ++MK K +W+EIV +
Sbjct: 268 YAKNEAFNVSNGDVFKWKHFWKVLAEQFGVGCGEYEEGVDLKLQDLMKGKEPVWEEIVRE 327
Query: 298 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTWVKKLREMK 357
+GL TK++++ + + +L + + SMNKS+E GF GF ++ + +W+ K + K
Sbjct: 328 NGLTPTKLKDVGIWWFGDVILGNEC-FLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYK 386
Query: 358 IIP 360
I+P
Sbjct: 387 IVP 389
>sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1
Length = 405
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 153/371 (41%), Gaps = 57/371 (15%)
Query: 35 FPSSHVDHYITFDALDSTDTTQKLS-SISQEVTHLFWVMFQRLKSEEINISNNSTMFKNV 93
+P H I + D +K S + + + ++ ++ +EE N M +N
Sbjct: 45 YPRKIKHHSIDLLNEEPKDIAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNF 104
Query: 94 MSVVVDSNKGRSRLRHVTLLMGTKHYMGPVFDPSLVGQLIGHDPPFKEDSLRLP-----F 148
+ + ++ LR V L G K Y + + L P E +R+P
Sbjct: 105 VQALELTS--IQTLRRVILTTGLKFYGLHLGEVRL---------PMIETDIRVPETFSGT 153
Query: 149 PNFYYAVEDIAASYSPAVT--YSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFR 206
PNFYY EDI +S Y++ + I G S S N T+A+YA +CR PFR
Sbjct: 154 PNFYYVQEDILKEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFR 213
Query: 207 YLGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 266
+ GN+ + F D+S S+++A+ Q+W + FN NGD+ +W W ++E F
Sbjct: 214 FPGNEKFYLGFDDISYSKLIADFQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFG 273
Query: 267 VEF----------------------VPFDEKE-------------KFDAVEMMKEKG--E 289
VE + EKE + + +K+K +
Sbjct: 274 VEVPKNQFATDFTLSTEVTLSTPSPINLYEKELGIKHTPNSKIINQISLQQWVKQKKVQD 333
Query: 290 IWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFADTMKSIRTW 349
W I E+ L + E+ + + + + +SSM+K+R+ G+ + DT +
Sbjct: 334 AWRTIAEREKLNAHAL-EVGTWAFCDFLFGRTYNVISSMSKARKLGYTDYYDTFDGFKET 392
Query: 350 VKKLREMKIIP 360
+L++ K IP
Sbjct: 393 FDELKKQKQIP 403
>sp|Q8BFY6|PEF1_MOUSE Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1
Length = 275
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 17 PGGPWKV----YGTARRPPP------SWFPSSHVDH--YITFDALDSTDTTQKLSSISQE 64
PGGP+ YG PP SWF S DH YI+ L SS + E
Sbjct: 86 PGGPYGTQPGHYGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDE 145
Query: 65 VTHLFWVMFQRLKSEEINISNNSTMFK 91
+ MF + KS I+++ S ++K
Sbjct: 146 TCLMMINMFDKTKSGRIDVAGFSALWK 172
>sp|O74733|CFT1_SCHPO Protein cft1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cft1 PE=3 SV=1
Length = 1441
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 222 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIF---DVEFVPFDEKEKF 278
D L + I A TD K + +N + + ++ L +F + E F+++
Sbjct: 790 DQESLEKHPILFALTDEGKLKVYNLADFSLLMECDVFDLPPTLFNGMESERTYFNKESSQ 849
Query: 279 DAVEMMKEKGEIWDEIVEKHGLYKTKMEEITCFEAL---NTVLH---LQFQHVSSMNKSR 332
+ VE++ ++ D+ E H ++++ EIT ++A NT H L F V +R
Sbjct: 850 ELVELLV--ADLGDDFKEPHLFLRSRLNEITVYKAFLYSNTDKHKNLLAFAKVPQETMTR 907
Query: 333 EF 334
EF
Sbjct: 908 EF 909
>sp|Q641Z8|PEF1_RAT Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1
Length = 283
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 15 TIPGGPWKVYGTARRPPP------SWFPSSHVDH--YITFDALDSTDTTQKLSSISQEVT 66
T P GP YG PP SWF S DH YI+ L SS + E
Sbjct: 99 TQPPGP---YGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETC 155
Query: 67 HLFWVMFQRLKSEEINISNNSTMFK 91
+ MF + K+ I++ S ++K
Sbjct: 156 LMMINMFDKTKTGRIDVVGFSALWK 180
>sp|Q6PAJ1|BCR_MOUSE Breakpoint cluster region protein OS=Mus musculus GN=Bcr PE=1 SV=3
Length = 1270
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 36 PSSHVDHYITFDALDSTDTTQKLSSISQEVTHLFWVMFQRLKSEEINISNNSTMFKNVMS 95
PSSH DH + DAL + LSSI++E+T R +S + + + K+ S
Sbjct: 664 PSSHPDHSLLQDALRISQNF--LSSINEEITP-------RRQSMTVKKGEHRQLLKD--S 712
Query: 96 VVVDSNKGRSRLRHV----TLLMGTK 117
+V+ +G +LRH+ LL+ TK
Sbjct: 713 FMVELVEGARKLRHIFLFTDLLLCTK 738
>sp|Q9UBV8|PEF1_HUMAN Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1
Length = 284
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 23 VYGTARRPPP------SWFPSSHVDH--YITFDALDSTDTTQKLSSISQEVTHLFWVMFQ 74
+YG PP SWF S DH YI+ L SS + E + MF
Sbjct: 105 LYGQGGAPPNVDPEAYSWFQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMFD 164
Query: 75 RLKSEEINISNNSTMFK 91
+ KS I++ S ++K
Sbjct: 165 KTKSGRIDVYGFSALWK 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,942,367
Number of Sequences: 539616
Number of extensions: 5592894
Number of successful extensions: 13276
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 13259
Number of HSP's gapped (non-prelim): 12
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)