BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037568
(423 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/415 (70%), Positives = 335/415 (80%), Gaps = 4/415 (0%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV SLG +T+TDQ+PLLMEQ H+IDIT +A ++S ++Q M Q+
Sbjct: 1 MDVTSLGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQN 60
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNR-SSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
+D P+ S+ ++SSS+ RLN+R S+ + RGDGYG R RSPLNSGLWISVEL+VTVS
Sbjct: 61 QDQPAGDAQDSSHQTTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTVS 120
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQG 179
QIIASIVVLSLSRNENPQAPLFAWIVGY SGCVATLPILYWRFRNR+Q + D++Q QG
Sbjct: 121 QIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQSNEQDTSQASQG 180
Query: 180 SSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
SS PP+ SYT+I + SDEEN +T++ + N F RLNGLVDHFKMALDC
Sbjct: 181 SSGSNPPD--RSYTSIYVSHVSDEENGHATQSASRNTIMPGAFTSRLNGLVDHFKMALDC 238
Query: 240 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 299
FFAVWFVVGNVWIFGGH+SPSDAP+LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS
Sbjct: 239 FFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 298
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD-NSGGTEGGVLAAGTEKERMI 358
VLGIRED+SQ RGAT E+INALP +KFK K N N +DQD NS EGG+LAAGTEKERMI
Sbjct: 299 VLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDANSAIDEGGILAAGTEKERMI 358
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
SGEDAVCCICLAKY DDDELREL CSHVFHV+CVDKWLKINA+CPLCK+E+G S+
Sbjct: 359 SGEDAVCCICLAKYADDDELRELPCSHVFHVECVDKWLKINATCPLCKNEVGTSN 413
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 292/415 (70%), Positives = 333/415 (80%), Gaps = 4/415 (0%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV SLG +T+TDQ+PLLMEQ H H+IDIT +A ++SS ++Q M PQ+
Sbjct: 1 MDVTSLGSNSNTQTDQHPLLMEQPETHNGHQHVIDITRNGEALTTSSRNDQYSEMHLPQN 60
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSF-MMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
ED + S+ +SSSS+ RLN+R+S + RG+GYG RSPLNSGLWISVEL+VTVS
Sbjct: 61 EDQAAGDAQNSSHQTSSSSAPRLNSRNSASLRRGEGYGHHGRSPLNSGLWISVELVVTVS 120
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQG 179
QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNR+Q + D++Q QG
Sbjct: 121 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRNQSNEQDTSQASQG 180
Query: 180 SSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
SS PP+ SY +I + SDEEN +T + + N F RLNGLVDHFKMALDC
Sbjct: 181 SSGSNPPD--RSYNSIHVSHVSDEENGHATRSASRNTIMPGAFTSRLNGLVDHFKMALDC 238
Query: 240 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 299
FFAVWFVVGNVWIFGGH+SPSDAP+LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS
Sbjct: 239 FFAVWFVVGNVWIFGGHTSPSDAPQLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 298
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD-NSGGTEGGVLAAGTEKERMI 358
VLGIRED+SQ RGAT E+INALP +KFK K N N +DQD N+ EGG+LAAGTEKERMI
Sbjct: 299 VLGIREDFSQNRGATVESINALPIFKFKLKNNENGDDQDVNAAIDEGGILAAGTEKERMI 358
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
SGEDAVCCICLAKY DDDELREL CSH FHV CVDKWLKINA+CPLCK+E+G S+
Sbjct: 359 SGEDAVCCICLAKYADDDELRELPCSHFFHVMCVDKWLKINATCPLCKNEVGTSN 413
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 295/414 (71%), Positives = 332/414 (80%), Gaps = 8/414 (1%)
Query: 12 TETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVP 71
T+ DQYPLLME++ H D +HII IT +D SS+SS++ QP + P HED +
Sbjct: 14 TQIDQYPLLMERMDSHDDHEHIISITGNEDGSSNSSHNGQPPDIDLPYHED----RSSSA 69
Query: 72 SYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLS 131
SSSS + + S+F RGDGY RRRRSP NSGLWIS+EL VTV QIIASIVVLSLS
Sbjct: 70 HQSSSSSLNRLNSRNSTFARRGDGYDRRRRSPFNSGLWISIELFVTVGQIIASIVVLSLS 129
Query: 132 RNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSS 191
RNENPQAPLFAW+VGYASGCVATLPILYWRFRNR+Q DS Q QGSS PP+ TSS
Sbjct: 130 RNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSGQQDSHQSHQGSSQNNPPD-TSS 188
Query: 192 YTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVW 251
YTAIS QAS+E+N RS E NGQ RLNGL+DHFKMALDCFFAVWFVVGNVW
Sbjct: 189 YTAISVTQASEEDNFRS-ELAIANGQTGRPLSSRLNGLMDHFKMALDCFFAVWFVVGNVW 247
Query: 252 IFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTR 311
IFGGHS+P+DAPKLY+LCIVFLTFSCIGYAMPFILCATICCCLPCIIS+LG RED+SQTR
Sbjct: 248 IFGGHSTPTDAPKLYKLCIVFLTFSCIGYAMPFILCATICCCLPCIISLLGFREDFSQTR 307
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
GAT E+IN+LP YKFK +K+ ++ND DNSG EGGVLA GTEKER ISGEDA+CCICL K
Sbjct: 308 GATTESINSLPIYKFKLQKSESVNDHDNSGTGEGGVLAEGTEKERAISGEDAICCICLNK 367
Query: 372 YVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS--PLVQDSAQH 423
Y D+DELREL CSHVFHVDCVDKWLKINASCPLCKSE+G+SSS P +DS+Q
Sbjct: 368 YADNDELRELPCSHVFHVDCVDKWLKINASCPLCKSELGESSSAQPSARDSSQQ 421
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 285/427 (66%), Positives = 325/427 (76%), Gaps = 38/427 (8%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
M + SL ++T +YPLLME+ H DR+HIIDIT DDASSSSS+D+ M PQH
Sbjct: 1 MAIPSLEPHSGSQTYKYPLLMERTENHGDREHIIDITRNDDASSSSSHDDHHPVMNPPQH 60
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNR-SSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
E+ PS+ST P+ + +SSNRLN+R SSFM R DGY RRRRSPLNSGLWISVEL+VTVS
Sbjct: 61 EERPSSSTQTPT---NQTSSNRLNSRNSSFMRRSDGYSRRRRSPLNSGLWISVELVVTVS 117
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQG 179
QIIASIVVLSLSR+ENP+APLFAW+VGYASGC ATLPILYWR+R R+Q
Sbjct: 118 QIIASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTRNQ------------ 165
Query: 180 SSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
IS NQAS+ + T + F R +G+VDHFKMALDC
Sbjct: 166 --------------TISVNQASE-----TAGAATRRSRFVGIFRMRFSGMVDHFKMALDC 206
Query: 240 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 299
FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS
Sbjct: 207 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 266
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD-NSGGTEGGVLAAGTEKERMI 358
+LG RED SQTRGA E+I+ALPTYKFK KKNG+++DQ+ NSG EGGVLAAGTEKER I
Sbjct: 267 ILGFREDLSQTRGAAPESIDALPTYKFKLKKNGDVDDQEVNSGAGEGGVLAAGTEKERAI 326
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS--SPL 416
SGEDAVCCICLAKY D++ELREL C H FHV+CVDKWLKINA CPLCK E+G +S SP
Sbjct: 327 SGEDAVCCICLAKYADNEELRELPCCHFFHVECVDKWLKINALCPLCKFEVGGTSGASPN 386
Query: 417 VQDSAQH 423
+++H
Sbjct: 387 ATSTSEH 393
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/413 (63%), Positives = 314/413 (76%), Gaps = 8/413 (1%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV S L +++TD +PLLME+ HIIDI + S S+D + + H
Sbjct: 1 MDVPSTELHSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGSPSHDRISSGLEASSH 60
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
ED PS+ PS S+S SN N+RSS ++R RRRRSPLNSGLWISVEL++T+SQ
Sbjct: 61 EDRPSSGVRAPSTQPSTSLSNGTNSRSSSLIRRGEA-RRRRSPLNSGLWISVELVLTLSQ 119
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
I+ASIVVLS+SR+E+P APLFAWIVGYASGCVATLP+LYWR+R R+Q ++ DS Q QGS
Sbjct: 120 IVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDSAQNHQGS 179
Query: 181 S-LPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
+ + P P S +S ++ S+ ++ RS T QNA+ RL LV++FKMALDC
Sbjct: 180 AHINVPAGPFS----LSVSRNSESDDRRSATTSPRGSQNAV-LNARLKVLVEYFKMALDC 234
Query: 240 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 299
FFAVWFVVGNVWIFGGHSS +AP LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS
Sbjct: 235 FFAVWFVVGNVWIFGGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 294
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
VLG RED +QTRGAT E+I+ALPTYKFK KN N D ++G ++GGV+AAGTEKER+IS
Sbjct: 295 VLGYREDLTQTRGATTESIDALPTYKFKLIKNRNGED-SSAGASDGGVVAAGTEKERVIS 353
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
GEDAVCCICLAK+ ++DELREL CSH FH +CVDKWLKINASCPLCKSE+G+S
Sbjct: 354 GEDAVCCICLAKFANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGES 406
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/414 (62%), Positives = 313/414 (75%), Gaps = 10/414 (2%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV S L + +TD +PLLME+ +HIIDI ++ S S S++ + + H
Sbjct: 1 MDVASTELHSENQTDTFPLLMERQENPNSSEHIIDIR--NEVSVSPSHNRISTGLEASLH 58
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
ED P + P+ +S SN N+RSS ++R RRRRSPLNSGLWISVEL++T+SQ
Sbjct: 59 EDRPLSGVRAPTSPPPTSLSNGTNSRSSSLIRRGEA-RRRRSPLNSGLWISVELVLTLSQ 117
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
IIASIVVLS+SR E+P+APLFAWIVGYASGCVATLP+LYWR+ +R+Q ++ DS Q QGS
Sbjct: 118 IIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQALEQDSAQNHQGS 177
Query: 181 S-LPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNA-LNFGGRLNGLVDHFKMALD 238
+ + P P S +S ++ S+ E+ RS T GQNA LN L L+++FKMALD
Sbjct: 178 AHINVPAGPFS----LSVSRNSEGEDRRSATTSPRGGQNAVLNARYELKVLLEYFKMALD 233
Query: 239 CFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 298
CFFAVWFVVGNVWIFG HSS +AP LYRLCIVFLTFSCIGYAMPFILCATICCCLPCII
Sbjct: 234 CFFAVWFVVGNVWIFGSHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 293
Query: 299 SVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMI 358
S+LG RED +QTRGAT E+I+ALPT+KFK KN N D +SG +GG++AAGTEKER+I
Sbjct: 294 SILGFREDLTQTRGATPESIDALPTHKFKLIKNRNGED-SSSGAADGGIVAAGTEKERVI 352
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
SGEDAVCCICLAKY ++DELREL CSH FH DCVDKWLKINASCPLCKSE+G+S
Sbjct: 353 SGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGES 406
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/414 (63%), Positives = 317/414 (76%), Gaps = 7/414 (1%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV S ++ TD PLLMEQ + +HIIDI + D+S S+S+D + + +
Sbjct: 1 MDVSSTEQHSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTSGLEASSN 60
Query: 61 EDIPSTSTGVPSY-HSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
ED P+TS PS H S+ +SN N R+S ++R RRRRSPLNSGLWISVEL++TVS
Sbjct: 61 EDRPTTSVRTPSISHLSTGTSNGSNTRNSSLIRRGEA-RRRRSPLNSGLWISVELVLTVS 119
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQG 179
QIIASIVVLSLSR+E+P+APLFAWIVGYASGCVATLP+LYWR+R+R+Q + ++ Q RQ
Sbjct: 120 QIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVTEQEAAQPRQS 179
Query: 180 SSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
S P + S IS + S+ + RS+ T + GQN+ RL LV++FKMALDC
Sbjct: 180 SHFSVPGDSIS----ISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTLVEYFKMALDC 235
Query: 240 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 299
FFAVWFVVGNVWIFGGHSS ++AP +YRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS
Sbjct: 236 FFAVWFVVGNVWIFGGHSSATEAPNMYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 295
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD-NSGGTEGGVLAAGTEKERMI 358
+LG RED QTRGAT+E+I+ALPTYKFK K+ +D+D NSG +GGV+AAGTE ER I
Sbjct: 296 LLGFREDLGQTRGATSESIDALPTYKFKLNKHRTGDDRDSNSGAGDGGVVAAGTEHERFI 355
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
SGEDAVCCICLAKY ++DELREL CSH FH DCVDKWLKINASCPLCK+E+G+S
Sbjct: 356 SGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEVGES 409
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/417 (65%), Positives = 322/417 (77%), Gaps = 12/417 (2%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPH-RMASPQ 59
M + SL L +++D YPLLMEQ D +HIIDIT + DASSS+S ++ P + Q
Sbjct: 1 MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60
Query: 60 HEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
H+D P++S VP S SSSN N+R+SF R D RRRSPLNSGLWIS+EL +TVS
Sbjct: 61 HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRADAR--RRRSPLNSGLWISIELALTVS 118
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQ- 178
QIIAS+VVLSLSR+E+P APLF WIVGYASGCVATLPILYWRFR+R+QG + +S Q RQ
Sbjct: 119 QIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQV 178
Query: 179 --GSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMA 236
S+LP P ++S S+EE+ + + T N Q+ RL LV++FKMA
Sbjct: 179 SFHSNLPGGPT-----FSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMA 233
Query: 237 LDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPC 296
LDCFFAVWFVVGNVWIFGGHSS S+AP LYRLCIVFLTFSCIGYAMPFILCATICCCLPC
Sbjct: 234 LDCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPC 293
Query: 297 IISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD-NSGGTEGGVLAAGTEKE 355
IIS+LG RED +QTRGAT+E+INALPTYKFK KKN N +D++ NSG EGGV+AAGTE+E
Sbjct: 294 IISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERE 353
Query: 356 RMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
R+ISGEDAVCCICLAKY ++DELREL CSH FH +CVDKWLKINA CPLCK E+G+S
Sbjct: 354 RVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVGES 410
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/422 (59%), Positives = 309/422 (73%), Gaps = 26/422 (6%)
Query: 1 MDVRSLGLIRDTE-TDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQ---PHRMA 56
MDV S+ +R+T TDQ PLLM+ H +R+HI+DIT+ D+ SSS P +
Sbjct: 1 MDVSSI--VRNTTLTDQDPLLMD----HGNREHIVDITSNDEEDSSSRSSLDELTPQGNS 54
Query: 57 SPQHEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGD-GYGRRRRSPLNSGLWISVELI 115
E + S+S + + S + R + RGD G GRR RSPLNSGLWISVEL+
Sbjct: 55 HQGEETVLSSSNATQQHPTHPSPPQQ---RPTSSRRGDNGNGRRTRSPLNSGLWISVELV 111
Query: 116 VTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQ 175
VTV+QI+A+IVV+ L+++E+P+APLF W++GY GC+ATLPILYWRFR ++ DS+Q
Sbjct: 112 VTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRATGQDSSQ 171
Query: 176 L---RQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDH 232
QG+S TP YTA+S QA+DEEN+ N Q + RLNGLVDH
Sbjct: 172 RATSSQGNSESTP------YTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDH 225
Query: 233 FKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICC 292
FKMA+DCFFAVWFVVGNVWIFGGHSSPSD+PKLYRLCI FLTFSCIGYAMPFILCATICC
Sbjct: 226 FKMAIDCFFAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICC 285
Query: 293 CLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGT 352
CLPC+ISVLG RE++SQTRGATAE INALP Y+FKSK ND + S EGG L G+
Sbjct: 286 CLPCLISVLGFRENFSQTRGATAEAINALPVYRFKSKSR---NDLEFSEEGEGGFLLLGS 342
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
+K+R+ISGEDA CCICL +Y DD+++REL CSHVFHVDCVDKWLKINA+CPLCK+E+G+S
Sbjct: 343 QKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGES 402
Query: 413 SS 414
SS
Sbjct: 403 SS 404
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/414 (59%), Positives = 299/414 (72%), Gaps = 18/414 (4%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV S+ R + TDQ+PLLM+ H H +RDHI+DIT ++ SSS DE +
Sbjct: 1 MDVSSIA--RTSLTDQHPLLMDH-HTHNNRDHIVDITMSN-GQDSSSIDELTPPHQGEEE 56
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
ST T P+ +S+R R++ RSPLNSGLWISVEL+VTV+Q
Sbjct: 57 TVSSSTLTAHPAPPQQRPTSSRNARRTT----------STRSPLNSGLWISVELVVTVAQ 106
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
I+A+IVV+ L+++E+P+APLF W++GY SGC+ATLPILYWRFR +G DS+Q S
Sbjct: 107 IVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWRFRTYSRGTGQDSSQRLSSS 166
Query: 181 SLPTP-PEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
S P ++ YTA+S QA+DEEN+ N Q RLNGLVDHFKMA+DC
Sbjct: 167 SQANNNPSESTPYTAVSVAQAADEENSTDMSAAPRNNQVGETLRTRLNGLVDHFKMAIDC 226
Query: 240 FFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS 299
FFAVWFVVGNVWIFGGHSSPSD+PKLYRLCI FLTFSCIGYAMPFILCATICCCLPC+IS
Sbjct: 227 FFAVWFVVGNVWIFGGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLIS 286
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
VLG RE++SQTRGAT E INALP Y+FKSK ND + S EGG L G++K+R+IS
Sbjct: 287 VLGFRENFSQTRGATTEAINALPVYRFKSKSR---NDLEFSEEGEGGFLLLGSQKKRLIS 343
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
GEDA CCICL +Y DD ++REL CSHVFHVDCVDKWLKINA+CPLCK+E+G+SS
Sbjct: 344 GEDASCCICLTRYGDDVQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGESS 397
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/397 (66%), Positives = 309/397 (77%), Gaps = 12/397 (3%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPH-RMASPQHEDIPSTSTGVPSYHSSSSS 79
MEQ D +HIIDIT + DASSS+S ++ P + QH+D P++S VP S SS
Sbjct: 1 MEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQHDDRPASSARVPISQPSFSS 60
Query: 80 SNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAP 139
SN N+R+SF R D RRRSPLNSGLWIS+EL +TVSQIIAS+VVLSLSR+E+P AP
Sbjct: 61 SNVSNSRNSFRRRADAR--RRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAP 118
Query: 140 LFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQ---GSSLPTPPEPTSSYTAIS 196
LF WIVGYASGCVATLPILYWRFR+R+QG + +S Q RQ S+LP P ++S
Sbjct: 119 LFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQVSFHSNLPGGPT-----FSLS 173
Query: 197 ANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH 256
S+EE+ + + T N Q+ RL LV++FKMALDCFFAVWFVVGNVWIFGGH
Sbjct: 174 VTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGH 233
Query: 257 SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAE 316
SS S+AP LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIIS+LG RED +QTRGAT+E
Sbjct: 234 SSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSE 293
Query: 317 TINALPTYKFKSKKNGNLNDQD-NSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDD 375
+INALPTYKFK KKN N +D++ NSG EGGV+AAGTE+ER+ISGEDAVCCICLAKY ++
Sbjct: 294 SINALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANN 353
Query: 376 DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
DELREL CSH FH +CVDKWLKINA CPLCK E+G+S
Sbjct: 354 DELRELPCSHFFHKECVDKWLKINALCPLCKREVGES 390
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/416 (62%), Positives = 312/416 (75%), Gaps = 10/416 (2%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSS-SYDEQPHRMASPQ 59
MDV S+ L D+E D YPLLM + +HIIDIT D+ S + + + S Q
Sbjct: 1 MDVPSVELNCDSEGDSYPLLMARPEHSNSSEHIIDITGAGDSGPSGLPHGRSSNGLNSSQ 60
Query: 60 HEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
ED PS+ST VP S+SS+ + SSF+ RGD RRRRSPLNSGLWIS+EL++T+S
Sbjct: 61 PEDRPSSSTRVPLSQPSTSSTGSNSRNSSFIRRGDA--RRRRSPLNSGLWISIELLLTMS 118
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQG 179
QIIA+I+VLSLS+NE P+APLFAWIVGYASGC ATLP+LYWR+R+R+Q + DS Q Q
Sbjct: 119 QIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQASEQDSLQSSQS 178
Query: 180 SS-LPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALD 238
SS + P P S +S ++AS+ E + Q + RL LV++FKM LD
Sbjct: 179 SSRINVPAGPFS----LSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEYFKMGLD 234
Query: 239 CFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 298
CFFAVWFVVGNVWIFGGHSS S+AP LYRLCIVFLTFSCIGYAMPFILC TICCCLPCII
Sbjct: 235 CFFAVWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCII 294
Query: 299 SVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG--GTEGGVLAAGTEKER 356
S+LG RED SQTRGAT+E+INALPTYKFK KK+ + +D++N+ G GGV+AAGTEKER
Sbjct: 295 SILGFREDLSQTRGATSESINALPTYKFKLKKSRSGDDRENNSGAGEGGGVVAAGTEKER 354
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
+ISGEDAVCCICLAKY ++DELREL CSH FH DCVDKWLKINA CPLCK+E+G+S
Sbjct: 355 VISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPLCKAEVGES 410
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/405 (61%), Positives = 301/405 (74%), Gaps = 3/405 (0%)
Query: 11 DTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASP-QHEDIPSTSTG 69
+++TD+YPLLME+ + + +HI+DI + DASSSSS DE +++P HE+ P T
Sbjct: 11 ESQTDRYPLLMERPENYENHEHIVDIVSASDASSSSSSDEDSAHVSNPTHHENRPLTDAW 70
Query: 70 VPSYHSSSSSSNRLNNR-SSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVL 128
VP SS SSS+ +R SS + R G GRRR SP NSGLWIS+E++ T S I+ASIVVL
Sbjct: 71 VPISQSSPSSSDVSESRNSSIITRAHGPGRRRWSPFNSGLWISIEIVFTTSLIVASIVVL 130
Query: 129 SLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEP 188
SLSR+E PQ PLFAW+VGYA+GC A+LPIL+WR+ R+ + + QGSS +
Sbjct: 131 SLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDGEQGLNHMLQGSSQGSTTLE 190
Query: 189 TSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVG 248
++SY IS +++ EEN T T NG RL+ L D++KMALDCFFAVWFVVG
Sbjct: 191 SNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALDCFFAVWFVVG 250
Query: 249 NVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYS 308
NVWIFGGHSS + AP LYRLCIVFLTFSCIGYAMPFILCA ICCCLPCIIS+LG D S
Sbjct: 251 NVWIFGGHSSFTAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISILG-HGDLS 309
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
Q RGA+AE+INALPTYKFK KKNG+ N + S G EGGV+ AGTEKER ISGEDAVCCIC
Sbjct: 310 QVRGASAESINALPTYKFKLKKNGSGNSGEISSGVEGGVVGAGTEKERAISGEDAVCCIC 369
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
L +Y DDDELREL CSH FH +CVDKWLKINASCPLCK E+G+++
Sbjct: 370 LTRYADDDELRELPCSHFFHSECVDKWLKINASCPLCKCEVGENT 414
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/395 (61%), Positives = 291/395 (73%), Gaps = 3/395 (0%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASP-QHEDIPSTSTGVPSYHSSSSS 79
ME+ + + +HI+DI + DASSSSS DE +++P HE+ P T VP SS SS
Sbjct: 1 MERPENYENHEHIVDIVSASDASSSSSSDEDSAHVSNPTHHENRPLTDAWVPISQSSPSS 60
Query: 80 SNRLNNR-SSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQA 138
S+ +R SS + R G GRRR SP NSGLWIS+E++ T S I+ASIVVLSLSR+E PQ
Sbjct: 61 SDVSESRNSSIITRAHGPGRRRWSPFNSGLWISIEIVFTTSLIVASIVVLSLSRDEKPQT 120
Query: 139 PLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISAN 198
PLFAW+VGYA+GC A+LPIL+WR+ R+ + + QGSS + ++SY IS
Sbjct: 121 PLFAWVVGYAAGCAASLPILFWRYLRRNHDGEQGLNHMLQGSSQGSTTLESNSYITISLT 180
Query: 199 QASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSS 258
+++ EEN T T NG RL+ L D++KMALDCFFAVWFVVGNVWIFGGHSS
Sbjct: 181 RSAAEENLPDASTNTWNGHTMGASNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGHSS 240
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
+ AP LYRLCIVFLTFSCIGYAMPFILCA ICCCLPCIIS+LG D SQ RGA+AE+I
Sbjct: 241 FTAAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISILG-HGDLSQVRGASAESI 299
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
NALPTYKFK KKNG+ N + S G EGGV+ AGTEKER ISGEDAVCCICL +Y DDDEL
Sbjct: 300 NALPTYKFKLKKNGSGNSGEISSGVEGGVVGAGTEKERAISGEDAVCCICLTRYADDDEL 359
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
REL CSH FH +CVDKWLKINASCPLCK E+G+++
Sbjct: 360 RELPCSHFFHSECVDKWLKINASCPLCKCEVGENT 394
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/395 (56%), Positives = 272/395 (68%), Gaps = 20/395 (5%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS 80
MEQ + +HIIDI S+S+S+ P D +T VP+ + S+
Sbjct: 1 MEQTTGVSGHEHIIDIPRDSGPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVG 60
Query: 81 NRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPL 140
+S R D Y RR RSPLNSGLWIS+E++V VSQI+A+IVVLSLSR E+PQAPL
Sbjct: 61 APSAGHTSGARRSDNYVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPL 120
Query: 141 FAWIVGYASGCVATLPILYWRF--RNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISAN 198
F W++GY GC ATLP LYWR+ RN G +++ QGSS EP++S
Sbjct: 121 FEWVIGYTVGCFATLPHLYWRYIHRNIVNG-ENEPAHTLQGSSQNNSTEPSAS------- 172
Query: 199 QASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSS 258
++E +NA+ R+N L DHFKMALDCFFAVWFVVGNVWIFGG SS
Sbjct: 173 ---------ASERRRNAARNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSS 223
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
+DAP LYRLCIVFLTFSCIGYAMPFILCA ICCCLPCIISV+G RED + TRGAT+E+I
Sbjct: 224 AADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRGATSESI 283
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
N+LPTYKFK+KK + + + + G +GG++AAGT+KER +S EDAVCCICLAKY +DEL
Sbjct: 284 NSLPTYKFKTKKRRH-SSGNEAEGQDGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDEL 342
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
REL C+H FH +CVDKWLKINA CPLCKSEI SS
Sbjct: 343 RELPCTHCFHKECVDKWLKINALCPLCKSEIASSS 377
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/402 (58%), Positives = 274/402 (68%), Gaps = 29/402 (7%)
Query: 21 MEQVHRHTDRDHIIDI---TTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSS 77
ME + RDH IDI T S S S + +P D PST + +
Sbjct: 5 MEHTTGVSGRDHRIDIPRDTGPSSVSVSHSVGRENQEELNPV--DRPSTRALTSALQPPA 62
Query: 78 SSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQ 137
+ +S RGD YGRR RSPLNSGLWIS+E+IV VSQI+A+IVVLSLSR E+PQ
Sbjct: 63 AVGPPHAGNTSGARRGDNYGRRHRSPLNSGLWISIEVIVNVSQIVAAIVVLSLSRKEHPQ 122
Query: 138 APLFAWIVGYASGCVATLPILYWRF--RNRHQGIDSDSTQLRQGSSLP--TPPEPTSSYT 193
APLF W++GY GC ATLP LYWR+ RN G + + L QGSS EPT +
Sbjct: 123 APLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEQAHSL-QGSSQSQNNSTEPTHA-- 179
Query: 194 AISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIF 253
AS E R+ +NA+ R+N L DHFKMALDCFFAVWFVVGNVWIF
Sbjct: 180 ------ASASERRRTA------ARNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIF 227
Query: 254 GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGA 313
GG SS +DAP LYRLCIVFLTFSCIGYAMPFILCA ICCCLPCIISV+G RED + TRGA
Sbjct: 228 GGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRGA 287
Query: 314 TAETINALPTYKFKSKK--NGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
T+E+IN+LPTYKFK+KK +G+ ND + G +GG+LAAGT+KER +S EDAVCCICLAK
Sbjct: 288 TSESINSLPTYKFKTKKRRHGSGNDAE---GQDGGILAAGTDKERSLSAEDAVCCICLAK 344
Query: 372 YVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
Y +DELREL C+H FH +CVDKWLKINA CPLCKSEI SS
Sbjct: 345 YAHNDELRELACTHCFHKECVDKWLKINALCPLCKSEIASSS 386
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/398 (57%), Positives = 274/398 (68%), Gaps = 23/398 (5%)
Query: 21 MEQVHRHTDRDHIIDI--TTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSS 78
MEQ + +HIIDI AS S S + H ++P D PST VP+ + S+
Sbjct: 1 MEQATGVSGPEHIIDIPREIGPPASVSRSAGRENHEESNPV--DRPSTRALVPALQAPSA 58
Query: 79 -SSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQ 137
+ + +S R D Y RR RSPLNSGLWIS+E+IV SQI+A+IVVL +SR E+PQ
Sbjct: 59 IGAVPITGHTSGTRRNDNYVRRHRSPLNSGLWISIEVIVNFSQIVAAIVVLCVSRKEHPQ 118
Query: 138 APLFAWIVGYASGCVATLPILYWRF--RNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAI 195
APL W++GY GC ATLP LYWR+ RN G + +S+ QGS+ +S A
Sbjct: 119 APLLEWVIGYTVGCFATLPHLYWRYIHRNIVNG-EHESSHTPQGSAH------NNSNEAT 171
Query: 196 SANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGG 255
A AS+ N + +NA+ R+N L DHFKMALDCFFAVWFVVGNVWIFGG
Sbjct: 172 HAASASERRRNAA--------RNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGG 223
Query: 256 HSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATA 315
SS +DAP LYRLCIVFLTFSCIGYAMPFILCA ICCCLPCIIS++G RED + TRGA++
Sbjct: 224 RSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISIMGFREDTNNTRGASS 283
Query: 316 ETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDD 375
E+INALPTYKFK KK + + + G EGG+LAAGT+KER +S EDAVCCICLAKY +
Sbjct: 284 ESINALPTYKFKIKKRRHGSGSETE-GQEGGILAAGTDKERSLSAEDAVCCICLAKYAHN 342
Query: 376 DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
DELREL C+H FH DCVDKWLKINA CPLCKSEI SS
Sbjct: 343 DELRELPCAHCFHKDCVDKWLKINALCPLCKSEIVSSS 380
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/428 (55%), Positives = 308/428 (71%), Gaps = 14/428 (3%)
Query: 3 VRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMAS--PQH 60
V SL L + + PLLME+ H+I+I + DAS+SS+ H + QH
Sbjct: 5 VVSLNLCLEGSSGTLPLLMERSGSLNSSQHVIEIAGSADASTSSASHHDRHFNGTNVTQH 64
Query: 61 EDIPSTS---TGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVT 117
E+ S + PS ++S S+ + SSF+ RGD RR RSP++SGLWIS+EL++
Sbjct: 65 EERISGARMPLSQPSVSATSVSNGSNSRNSSFIRRGDT--RRNRSPVHSGLWISIELVLL 122
Query: 118 VSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLR 177
+SQI+ASI+VLSLSR+E+P+ PLF WI+GYASGC ATLP+LYWR+ + + + +S+Q R
Sbjct: 123 LSQIVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQEQESSQSR 182
Query: 178 QGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMAL 237
Q S P +P+ T + +++ + E+ +S + + Q +L R+ LV++FK++L
Sbjct: 183 QTS--PRINDPSG--TLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYFKISL 238
Query: 238 DCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCI 297
DCFFAVWFVVGNVWIFGGHSS ++AP LYRLCIVFL FSCIGYAMPFI C+TICCCLPCI
Sbjct: 239 DCFFAVWFVVGNVWIFGGHSSANEAPNLYRLCIVFLAFSCIGYAMPFIFCSTICCCLPCI 298
Query: 298 ISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM 357
IS+LG+RED SQ RGAT+E+INALP YKFK KKN N NS EGGV+AAGTEKE +
Sbjct: 299 ISILGVREDMSQNRGATSESINALPIYKFKMKKNKR-NGNGNSAAAEGGVVAAGTEKEHV 357
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
ISGEDAVCCICLAKY ++DELREL CSH+FH DCVDKWLKINA CPLCKS++G++ + V
Sbjct: 358 ISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSDVGENLTGSV 417
Query: 418 --QDSAQH 423
+D++Q
Sbjct: 418 SGEDASQQ 425
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/379 (58%), Positives = 271/379 (71%), Gaps = 19/379 (5%)
Query: 55 MASPQHEDIPSTSTGVPSYHSSSSSSNRLNNRSSF--------MMRGDGYGRRRRSPLNS 106
MA P H I T + PS SSS+ +RL N F R+ RSPLNS
Sbjct: 1 MARPTHHVIDITGSSRPSTSSSSTPHDRLANDVDFGALNSRTRRRGDTTRSRQHRSPLNS 60
Query: 107 GLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRH 166
GLWI VEL++TVSQI+AS+VVLSLS++E+P APL AWIVGYASGCVATLP+LYWR+ +
Sbjct: 61 GLWICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLYWRYYHNR 120
Query: 167 QGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRL 226
+ +S+Q + P +P+ + + S ++ + T + Q + RL
Sbjct: 121 GVREQESSQ-----ASPRSNDPSGTLLSDSTTNGGEDA---PASSRTRSNQESWLMNARL 172
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFIL 286
LV++FK+A+DCFFA+WFVVGNVWIFGGHSS AP LYRLC+VFLTFSCIGYAMPFIL
Sbjct: 173 KLLVEYFKIAVDCFFAIWFVVGNVWIFGGHSSADQAPNLYRLCVVFLTFSCIGYAMPFIL 232
Query: 287 CATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGG 346
CATICCCLPCIIS+LG+RED +QTRGA++E+INALPTYKFK K+N + + NS EGG
Sbjct: 233 CATICCCLPCIISILGVREDMAQTRGASSESINALPTYKFKMKRNKS-KGESNSAVGEGG 291
Query: 347 VLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
V+AAGTEKERMISGEDA CCICLAKY ++DELREL CSH+FH DCVDKWLKINA CPLCK
Sbjct: 292 VVAAGTEKERMISGEDAACCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCK 351
Query: 407 SEIGDSSSPLVQ--DSAQH 423
SE+ ++ V D+ QH
Sbjct: 352 SEVSENVRGSVSGVDANQH 370
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/340 (64%), Positives = 267/340 (78%), Gaps = 10/340 (2%)
Query: 77 SSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENP 136
S+ SNR N SS + RGD RR RSP++SGLWIS+EL++ VSQI+ASIVVLSLSRNE+P
Sbjct: 63 STESNRRN--SSSVRRGDA--RRSRSPVHSGLWISIELVLLVSQIVASIVVLSLSRNEHP 118
Query: 137 QAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAIS 196
Q PLF WIVGYASGCVATLP+L+WR+ N + + DS Q RQ S P +P+ ++ +IS
Sbjct: 119 QTPLFQWIVGYASGCVATLPLLFWRYYNHNHLREQDSAQSRQTS--PRISDPSGTFLSIS 176
Query: 197 ANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH 256
N + ++ + + Q ++ R+ LV++FK++LDCFFAVWFVVGNVWIFGG
Sbjct: 177 RNNG---DAGQAAAASSRSNQTSILMNRRMKILVEYFKISLDCFFAVWFVVGNVWIFGGR 233
Query: 257 SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAE 316
SS + AP LYRLCIVFL FSCIGYAMPFILC+TICCCLPCIIS+LG+RED SQ RGAT+E
Sbjct: 234 SSAAVAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCLPCIISILGVREDLSQNRGATSE 293
Query: 317 TINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDD 376
+INALPTYKFK KKN N ++NS +GG +AAGTEKER+ISGEDAVCCICLAKY ++D
Sbjct: 294 SINALPTYKFKMKKN-KKNSENNSANIDGGTVAAGTEKERVISGEDAVCCICLAKYENND 352
Query: 377 ELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
ELREL CSH+FH DCVDKWLKINA CPLCKSE+G+ + L
Sbjct: 353 ELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGEDLTGL 392
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/426 (52%), Positives = 286/426 (67%), Gaps = 26/426 (6%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
M + S + +T TDQYPLLME+ H + +H+I+I +ASSS S + H
Sbjct: 1 MAISSDKPMHETHTDQYPLLMERHDNHINVEHVINIDRGGEASSSESSGLEFPHGGIHIH 60
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
+ + P SS+SS ++ N RS R + GRR SP NSG WIS+EL T++Q
Sbjct: 61 SHRETNGSQTPPNGSSASSPSQGNTRSP---RSESMGRRNLSPFNSGFWISIELAFTLTQ 117
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
IIAS +VL LSR+E+PQAPLFAW+VGY +GCVA+LP++YWRF +R++G ++ Q+ Q S
Sbjct: 118 IIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRNRGSEA-VVQVNQAS 176
Query: 181 SLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCF 240
+SY IS +++ + E+ +S + + G A R+ ++DHFK ALDCF
Sbjct: 177 PHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTA---NTRMGLIMDHFKTALDCF 233
Query: 241 FAVWFVVGNVWIFGGHSSPSDAPKLYR----------------LCIVFLTFSCIGYAMPF 284
F V FVVGNVWIFGGH+S SDAP LYR LCIV+LT SCI YAMPF
Sbjct: 234 FGVLFVVGNVWIFGGHASVSDAPNLYRYFLNPDVKTLQISFESLCIVYLTLSCINYAMPF 293
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGN-LNDQDNSGGT 343
ILCA ICCCLPCIISVLGIRED +Q RGA+ E+IN LPTYKFK + N Q NS
Sbjct: 294 ILCAMICCCLPCIISVLGIREDLNQVRGASEESINTLPTYKFKVTNDENGCTGQRNS--E 351
Query: 344 EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
EGG++A GTEKER+ISGEDAVCCICLA+Y++DDE+REL C+H FH CVD+WLKINA+CP
Sbjct: 352 EGGIVAIGTEKERVISGEDAVCCICLARYLEDDEMRELPCAHFFHAVCVDRWLKINATCP 411
Query: 404 LCKSEI 409
LCK EI
Sbjct: 412 LCKFEI 417
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/315 (65%), Positives = 246/315 (78%), Gaps = 9/315 (2%)
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFR 163
LNSGLWIS+EL +TV QIIA+IVVLSLS++E+P+APLF WIVGYA GCVATLP+LYWR+
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 164 NRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF- 222
+ +Q + DS Q R ++ P A S ++ S E + R T T + G F
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGP------FAFSISRTS-EADGRQTNTTSSRGSRYPGFI 219
Query: 223 -GGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYA 281
RL +V++FKMALDCFFAVWFVVGNVWIFGGHSS ++AP LYRLC+VFLTFSCIGYA
Sbjct: 220 SAARLKVIVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCLVFLTFSCIGYA 279
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
MPFILC TICCCLPCIIS+LG RED +Q RGAT E+INALPT+KFK KK+ + D + S
Sbjct: 280 MPFILCTTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSS 339
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
+EGGV+AAGT+ ER ISGEDAVCCICLAKY +++ELREL CSH FH +CVDKWLKINAS
Sbjct: 340 TSEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINAS 399
Query: 402 CPLCKSEIGDSSSPL 416
CPLCKSE+G+ +S L
Sbjct: 400 CPLCKSEVGEKNSDL 414
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/315 (65%), Positives = 246/315 (78%), Gaps = 9/315 (2%)
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFR 163
LNSGLWIS+EL +TV QIIA+IVVLSLS++E+P+APLF WIVGYA GCVATLP+LYWR+
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 164 NRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF- 222
+ +Q + DS Q R ++ P A S ++ S E + R T T + G F
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGP------FAFSISRTS-EADGRQTNTTSSRGSRYPGFI 219
Query: 223 -GGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYA 281
RL +V++FKMALDCFFAVWFVVGNVWIFGGHSS ++AP LYRLC+VFLTFSCIGYA
Sbjct: 220 SAARLKVIVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCLVFLTFSCIGYA 279
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
MPFILC TICCCLPCIIS+LG RED +Q RGAT E+INALPT+KFK KK+ + D + S
Sbjct: 280 MPFILCTTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSS 339
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
+EGGV+AAGT+ ER ISGEDAVCCICLAKY +++ELREL CSH FH +CVDKWLKINAS
Sbjct: 340 TSEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINAS 399
Query: 402 CPLCKSEIGDSSSPL 416
CPLCKSE+G+ +S L
Sbjct: 400 CPLCKSEVGEKNSDL 414
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/410 (53%), Positives = 268/410 (65%), Gaps = 37/410 (9%)
Query: 14 TDQYPLLMEQVHRHTDRDHIID-------ITTTDDASSSSSYDEQPHRMASPQHEDIPST 66
TD +PLLM+ + + R+ ID ++T ++S D P + Q PS
Sbjct: 14 TDNHPLLMDHLENTSHREIAIDSPRDDDASSSTSSRDNNSGLDRLPRNSENLQETTTPSN 73
Query: 67 STGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIV 126
S P RGD RR++SPLNS WISVELIVTVSQIIA+I
Sbjct: 74 SQNAP-----------------LARRGDNRVRRQQSPLNSSCWISVELIVTVSQIIAAIS 116
Query: 127 VLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRF--RNRHQGIDSDSTQLRQGSSLPT 184
VLSLSRNE+P APLF W++GY GC+ATLP+LYWR+ RNR ++Q +S+P
Sbjct: 117 VLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRYIHRNRLTTGQESASQNFPPNSIPE 176
Query: 185 PPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVW 244
+S+T SA++ S E T T + N + R+ DHF+MALDCFFAVW
Sbjct: 177 ----ANSFTESSASRIS--EAGHVTGTNGVSQNNTITRNPRVQAYADHFRMALDCFFAVW 230
Query: 245 FVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIR 304
FVVGNVWIFGGHSS DAP LYRLCI FLTFSCIGYAMPFILCA ICCCLPCIIS++ R
Sbjct: 231 FVVGNVWIFGGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISLMSFR 290
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
ED +Q +GATAE INAL TYKFK KK N G GG+LAAGT+KER++S EDAV
Sbjct: 291 EDLNQNKGATAEAINALRTYKFKLKKARN-----GEGSEGGGILAAGTDKERIVSAEDAV 345
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
CCICLA+YV++D+LREL C+H FH +CVDKWLKINA CPLCK+EI S+
Sbjct: 346 CCICLARYVNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEIDGGST 395
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/315 (64%), Positives = 245/315 (77%), Gaps = 9/315 (2%)
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFR 163
LNSGLWIS+EL +TV QIIA+IVVLSLS++E+P+APLF WIVGYA GCVATLP+LYWR+
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 164 NRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF- 222
+ +Q + DS Q R ++ P A S ++ S E + R T T + F
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGP------FAFSISRTS-EGDGRQTNTTSSRVSRYPGFI 219
Query: 223 -GGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYA 281
RL +V++FKMALDCFFAVWFVVGNVWIFGGHSS ++AP LYRLC+VFLTFSCIGYA
Sbjct: 220 SAARLKVIVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAEAPNLYRLCLVFLTFSCIGYA 279
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
MPFILC TICCCLPCIIS+LG RED +Q RGAT E+INALPT+KFK KK+ + D + S
Sbjct: 280 MPFILCTTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSSGDDNGSS 339
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
+EGGV+AAGT+ ER ISGEDAVCCICLAKY +++ELREL CSH FH +CVDKWLKINAS
Sbjct: 340 TSEGGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINAS 399
Query: 402 CPLCKSEIGDSSSPL 416
CPLCKSE+G+ +S L
Sbjct: 400 CPLCKSEVGEKNSDL 414
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/320 (63%), Positives = 242/320 (75%), Gaps = 20/320 (6%)
Query: 96 YGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATL 155
Y RR RSPLNSGLWIS+E++V VSQI+A+IVVLSLSR E+PQAPLF W++GY GC ATL
Sbjct: 20 YVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATL 79
Query: 156 PILYWRF--RNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETET 213
P LYWR+ RN G +++ QGSS EP++S ++E
Sbjct: 80 PHLYWRYIHRNIVNG-ENEPAHTLQGSSQNNSTEPSAS----------------ASERRR 122
Query: 214 GNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFL 273
+NA+ R+N L DHFKMALDCFFAVWFVVGNVWIFGG SS +DAP LYRLCIVFL
Sbjct: 123 NAARNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSSAADAPNLYRLCIVFL 182
Query: 274 TFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGN 333
TFSCIGYAMPFILCA ICCCLPCIISV+G RED + TRGAT+E+IN+LPTYKFK+KK +
Sbjct: 183 TFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRH 242
Query: 334 LNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVD 393
+ + + G +GG++AAGT+KER +S EDAVCCICLAKY +DELREL C+H FH +CVD
Sbjct: 243 -SSGNEAEGQDGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVD 301
Query: 394 KWLKINASCPLCKSEIGDSS 413
KWLKINA CPLCKSEI SS
Sbjct: 302 KWLKINALCPLCKSEIASSS 321
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/418 (53%), Positives = 267/418 (63%), Gaps = 38/418 (9%)
Query: 10 RDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTG 69
R ETD +PLL + + H +DI D+S S+S + + + +P G
Sbjct: 11 RSEETDNFPLLADHMENTGHHAHAVDIPW--DSSPSTSRRDNHNGF-----DQLPRILEG 63
Query: 70 VPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLS 129
P + S+S N R D GRR+ SPLNSG WISVEL+V VSQIIA+I VLS
Sbjct: 64 SPGTSTPSNSQN-----GPLARRDDNRGRRQPSPLNSGCWISVELVVNVSQIIAAICVLS 118
Query: 130 LSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTP-PEP 188
+SRNE+P +PLF W++GY GC ATLP LYWR+ +R +LPT EP
Sbjct: 119 VSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHR---------------NLPTTGQEP 163
Query: 189 TSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVG 248
T I N + + T T + N R DHFKMALDCFFAVWFVVG
Sbjct: 164 T--VQNIPPNNTPEANSYGVTGTNGVSRNNEATVNPRFQAFADHFKMALDCFFAVWFVVG 221
Query: 249 NVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYS 308
NVW+FGGHSS DAP LYRLCI FLTFSCIGYAMPFILCA ICCCLPCIIS+LG RED +
Sbjct: 222 NVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISILGFREDLN 281
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEG-GVLAAGTEKERMISGEDAVCCI 367
Q RGA+AETINAL T KFKSKK +D G G GV+AAGT KER+IS EDAVCCI
Sbjct: 282 QNRGASAETINALGTCKFKSKKT-----RDGDGNEVGVGVVAAGTNKERVISAEDAVCCI 336
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG--DSSSPLVQDSAQH 423
CLA+YVD+D+LREL C+H FH DCVDKWLKINA CPLCK+EI +S+P + +H
Sbjct: 337 CLARYVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEIDGVSTSAPAIGFGRRH 394
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/431 (54%), Positives = 302/431 (70%), Gaps = 19/431 (4%)
Query: 3 VRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMAS--PQH 60
V SL L + + PLLM + H+I+I + AS+SS+ H + QH
Sbjct: 5 VVSLELCLEGSSYTLPLLMARPGSLNGSQHVIEIAGSAYASTSSASHHDRHFNGTDVTQH 64
Query: 61 ED------IPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVEL 114
E+ +P S PS ++S S+ + SSF+ RGD RR RSP++SGLWIS+EL
Sbjct: 65 EERISGARMPPLSQ--PSVSATSVSNGSNSRNSSFIRRGDT--RRNRSPVHSGLWISIEL 120
Query: 115 IVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDST 174
++ VSQI+ASI+VLSLSR+E+P+ PLF WI+GYASGC ATLP+LYWR+ H +
Sbjct: 121 VLLVSQIVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWRYY--HHNHMREQD 178
Query: 175 QLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFK 234
+ S P +P+ T + +++ + E+ ++ + + Q +L R+ LV++FK
Sbjct: 179 SSQSRQSSPRINDPSG--TLLFSSRTNSGEDGQAAVASSRSNQASLLMNRRMKTLVEYFK 236
Query: 235 MALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCL 294
++LDCFFAVWFVVGNVWIFGGHSS +AP LYRLCIVFL FSCIGYAMPFILC+TICCCL
Sbjct: 237 ISLDCFFAVWFVVGNVWIFGGHSSVEEAPNLYRLCIVFLAFSCIGYAMPFILCSTICCCL 296
Query: 295 PCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK 354
PCIIS+LG+RED SQ RGA +E+INALP YKFK+KKN N NS EGGV+AAGTEK
Sbjct: 297 PCIISILGVREDMSQNRGAASESINALPIYKFKTKKNKR-NGDSNSAAAEGGVVAAGTEK 355
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
ER+ISGEDAVCCICLAKY ++DELREL CSH+FH DCVDKWLKINA CPLCKS++G++ +
Sbjct: 356 ERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSDVGENLT 415
Query: 415 PLV--QDSAQH 423
V +D++Q
Sbjct: 416 GSVSGEDASQQ 426
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 239/322 (74%), Gaps = 14/322 (4%)
Query: 98 RRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPI 157
R+R SPLNSGLWIS+EL +TVSQI+ASI+VLSLSR+E PQAPL W+ GYA+GC+ATLP+
Sbjct: 67 RQRISPLNSGLWISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPL 126
Query: 158 LYWRFRNR------HQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTET 211
LYWR+ +R H +S S SLP P TS Y A++ AS E E
Sbjct: 127 LYWRYTHRNGTTQAHDQHESPSQSTPSAESLPPSPRGTS-YVALNIPSASTE----VVEP 181
Query: 212 ETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIV 271
+ ++ +GLV+ FK+ALDCFFAVWFVVGNVWIFGGHSS +AP LYRLCIV
Sbjct: 182 RARSRGRDVDSASDNSGLVEKFKIALDCFFAVWFVVGNVWIFGGHSSSREAPNLYRLCIV 241
Query: 272 FLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKN 331
FLTFSCIGYAMPFILCATICCCLPCII++LG RE+ +Q RGA+AE I ALPTYKFKS+ +
Sbjct: 242 FLTFSCIGYAMPFILCATICCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPS 301
Query: 332 GNLND---QDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFH 388
D D+ G EGG +AAGT+KER +S +DAVCCICLA+Y D + LREL C+H FH
Sbjct: 302 SESKDGSESDSEGSNEGGFVAAGTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFH 361
Query: 389 VDCVDKWLKINASCPLCKSEIG 410
VDCVDKWLKINASCPLCK ++G
Sbjct: 362 VDCVDKWLKINASCPLCKLDVG 383
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/345 (61%), Positives = 263/345 (76%), Gaps = 15/345 (4%)
Query: 83 LNNRSSFMMRGDGY--GRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPL 140
LN+R+S RGD R+ RSPLNSGLWI VEL++TVSQI+AS+VVLSLS++E+P+APL
Sbjct: 38 LNSRTS-RRRGDTTRSSRQHRSPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPRAPL 96
Query: 141 FAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQA 200
FAWIVG+ASGCVATLP+LYWR+ H + + Q S P S T +S +
Sbjct: 97 FAWIVGFASGCVATLPLLYWRYY--HNCLVRELESSSQASLRSNDP----SGTLLSDSTT 150
Query: 201 SDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPS 260
+ E+ + + Q + RL LV++FK+A+DCFFA+WF+VGNVWIFGGHSS
Sbjct: 151 NGGED---VPASSRSNQESWLMNARLKLLVEYFKIAVDCFFAIWFIVGNVWIFGGHSSAD 207
Query: 261 DAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINA 320
AP LYRLC+VFLTFSCIGYAMPFILCATICCCLPCIIS+LG+RED +QT GA++E+IN+
Sbjct: 208 QAPNLYRLCVVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDMAQTPGASSESINS 267
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRE 380
LPTYKFK KKN + + NS +EGGV+A+GTEKERMISGEDA CCICLAKY ++DELRE
Sbjct: 268 LPTYKFKMKKNKSKG-ESNSAVSEGGVVASGTEKERMISGEDAACCICLAKYENNDELRE 326
Query: 381 LICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV--QDSAQH 423
L+CSH+FH DCVDKWLKINA CPLCKSE+ ++ V +D+ QH
Sbjct: 327 LLCSHLFHKDCVDKWLKINALCPLCKSEVSENVRGSVSGEDANQH 371
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/322 (61%), Positives = 236/322 (73%), Gaps = 25/322 (7%)
Query: 98 RRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPI 157
R+R SPLNSGLWIS+EL +TVSQI+ASI+VLSLSR+E PQAPL W+ GYA+GC+ATLP+
Sbjct: 67 RQRISPLNSGLWISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPL 126
Query: 158 LYWRFRNR------HQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTET 211
LYWR+ +R H +S S SLP P TS Y A++ AS E
Sbjct: 127 LYWRYTHRNGTTQAHDQHESPSQSTPSAESLPPSPRGTS-YVALNIPSASTE-------- 177
Query: 212 ETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIV 271
+ R+ LV+ FK+ALDCFFAVWFVVGNVWIFGGHSS +AP LYRLCIV
Sbjct: 178 -------VVESRARVGRLVEKFKIALDCFFAVWFVVGNVWIFGGHSSSREAPNLYRLCIV 230
Query: 272 FLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKN 331
FLTFSCIGYAMPFILCATICCCLPCII++LG RE+ +Q RGA+AE I ALPTYKFKS+ +
Sbjct: 231 FLTFSCIGYAMPFILCATICCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPS 290
Query: 332 GNLND---QDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFH 388
D D+ G EGG +AAGT+KER +S +DAVCCICLA+Y D + LREL C+H FH
Sbjct: 291 SESKDGSESDSEGSNEGGFVAAGTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFH 350
Query: 389 VDCVDKWLKINASCPLCKSEIG 410
VDCVDKWLKINASCPLCK ++G
Sbjct: 351 VDCVDKWLKINASCPLCKLDVG 372
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/417 (52%), Positives = 280/417 (67%), Gaps = 24/417 (5%)
Query: 11 DTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGV 70
D+ETD +PLL++ + R+ ID D ASSS++ E + + +P S
Sbjct: 11 DSETDNHPLLIDHMENTAHREIAIDSPRDDVASSSTARREDNDGL-----DRLPRISE-- 63
Query: 71 PSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSL 130
S+ ++++SN + + R RR++SPLNS WIS+EL+VTVSQIIA+I VLSL
Sbjct: 64 -SFSETTTASN--SQSAPLARRDANRARRQQSPLNSSCWISIELVVTVSQIIAAICVLSL 120
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRF--RNRHQGIDSDSTQLRQGSSLPTPPEP 188
SR E+P +PLF W++GY GCVATLP+LYWR+ RNR ++Q +S+P
Sbjct: 121 SRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRNRPTTGQEPASQNFPPNSIPE---- 176
Query: 189 TSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVG 248
++S+T SA S E TET + N L R DHF+MALDCFFAVWFVVG
Sbjct: 177 SNSHTTSSAPGMS--EAGFVTETNGVSQNNMLTRNPRAQVYADHFRMALDCFFAVWFVVG 234
Query: 249 NVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYS 308
NVW+FGGHSS DAP LYRLCI FLTFSCIGYAMPFILCA ICCCLPCIIS++ RED +
Sbjct: 235 NVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISLMSFREDLN 294
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
Q +GA+AE INAL TYKFK+KK+ N GGV+AAGT KER++S EDAVCCIC
Sbjct: 295 QNKGASAEAINALRTYKFKTKKSRNG----EGIEVGGGVVAAGTNKERIVSAEDAVCCIC 350
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI--GDSSSPLVQDSAQH 423
LA+Y ++D+LREL C+H FH +CVDKWLKINA CPLCK+EI G +++P + +H
Sbjct: 351 LARYSNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEIDSGPTTAPAIGFGRRH 407
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/409 (52%), Positives = 266/409 (65%), Gaps = 29/409 (7%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV +G R+++TD +PLLME H I I D AS+S+ PHR +
Sbjct: 1 MDVLPVGSERESQTDSHPLLME---------HAIGIPRHDVASTST-----PHRDNNDGM 46
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
+ +P S SSS +++ + ++ + R D RR+ LNSG WIS+EL V +SQ
Sbjct: 47 DQLPRDS------ESSSGTTDASYSPNAPLARRDDNRLRRQQSLNSGFWISIELAVNLSQ 100
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
IIA+I VLS+S+NE+P APLF W++GY GC+ATLP LYWR+ R+Q + Q +
Sbjct: 101 IIAAICVLSVSKNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQ---LATVQGSNQN 157
Query: 181 SLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCF 240
+P +SS+T IS S E T + N + R DHFKMALDCF
Sbjct: 158 YVPDNSFESSSFTGISPPPVS--EAGVVTVSNGVLRNNVVITNPRAQAFADHFKMALDCF 215
Query: 241 FAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISV 300
FAVWFVVGNVW+FGGHSS DAP LYRLCI FLTFSCIGYAMPFILCA ICCCLPCIIS+
Sbjct: 216 FAVWFVVGNVWVFGGHSSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISL 275
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
+G RED + RGAT++ INAL TY+F+SKK + GGV A GT+KER +S
Sbjct: 276 MGFREDLDENRGATSDAINALGTYRFRSKK----PRNGEANEGGGGVFAPGTDKERAVSA 331
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EDAVCCICLA+YVD+D+LR L C H FH DCVDKWLKINA CPLCK+EI
Sbjct: 332 EDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEI 380
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/396 (53%), Positives = 271/396 (68%), Gaps = 14/396 (3%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS 80
M+ T RDH ID+ D S+S+ + + + PS+ P SSSS++
Sbjct: 1 MDHPGNVTPRDHAIDMPRNDLTLPSTSHPDNHNDLDELNRIRGPSSEVP-PVPESSSSTT 59
Query: 81 NRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPL 140
LN RS+ R D G R+++PLNSGLWIS+ELIV VSQIIA+I VLS+SRNE+P+APL
Sbjct: 60 GTLNFRSASFTRRD-QGNRQQNPLNSGLWISIELIVNVSQIIAAIAVLSVSRNEHPRAPL 118
Query: 141 FAWIVGYASGCVATLPILYWRFRNRH-QGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQ 199
F W+VGY GCVAT+P LYWR+ +R+ Q I+ + T QGSS E + S+ IS+ +
Sbjct: 119 FEWVVGYIIGCVATIPHLYWRYLHRNCQNIEQEPTT--QGSSQRNISE-SDSFAPISSAR 175
Query: 200 ASDEENNRSTETETGNGQNALNFGG-RLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSS 258
AS+ N + TG +N R+ L+ K+ALDCFFAVWFVVGNVWIFGG SS
Sbjct: 176 ASEVGNE---DNSTGVSRNNFPIASPRVYALIACLKLALDCFFAVWFVVGNVWIFGGRSS 232
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
DAP LYRLCIVFLTF IGYA+PFILC ICCCLPCIIS++G ED +GAT E I
Sbjct: 233 VHDAPNLYRLCIVFLTFGFIGYALPFILCTMICCCLPCIISMVGFHEDLDLNKGATTEVI 292
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+AL YK+KS + + D D G GGVL AGT+KER IS EDAVCCICL+K+ ++++L
Sbjct: 293 DALVAYKYKSMR---IRDGD-VGEDNGGVLGAGTDKERTISAEDAVCCICLSKFSNNEDL 348
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
REL C+HVFH++C+DKWLKINA CPLCKSE+G S++
Sbjct: 349 RELPCAHVFHMECIDKWLKINALCPLCKSELGGSTA 384
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/409 (52%), Positives = 266/409 (65%), Gaps = 29/409 (7%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MD + R+++TD +PLLME H+I I D AS+S+ P R +
Sbjct: 1 MDALPVESERESQTDSHPLLME---------HVIGIPRDDVASTST-----PRRDNNDGM 46
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
+ +P S SSS ++ N+ ++ + R D RRR+ LNSG WIS+EL V +SQ
Sbjct: 47 DHLPRDS------ESSSGTTAAYNSPNTPIARRDDNRRRRQQSLNSGFWISIELAVNLSQ 100
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
IIA+I VLS+SRNE+P APLF W++GY GC+ATLP LYWR+ R+Q + Q +
Sbjct: 101 IIAAICVLSVSRNEHPHAPLFEWVIGYTIGCIATLPHLYWRYLQRNQ---LPTVQGSNQN 157
Query: 181 SLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCF 240
+P ++S+T IS S E T T + N + R DHFKMALDCF
Sbjct: 158 YVPDNSFESNSFTGISPPHVS--EAGVVTVTNGVSRNNTVTTNPRAQAFADHFKMALDCF 215
Query: 241 FAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISV 300
FAVWFVVGNVW+FGGHSS DAP LYRLCI FLTFSCIGYAMPFILCA ICCCLPCIIS+
Sbjct: 216 FAVWFVVGNVWVFGGHSSSHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCIISL 275
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
+G RED ++ RGAT++ INAL TYKFK+KK GGV A GT+KER +S
Sbjct: 276 MGFREDLNENRGATSDAINALGTYKFKTKK----PRNTEGNEGGGGVFAPGTDKERAVSA 331
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EDAVCCICLA+YVD+D+LR L C H FH DCVDKWLKINA CPLCK+EI
Sbjct: 332 EDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEI 380
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/413 (49%), Positives = 273/413 (66%), Gaps = 33/413 (7%)
Query: 13 ETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPS 72
E ++ + ME +H I+++ + AS+S+S+ + +D PSTST PS
Sbjct: 169 EINKSKIFMEHATCDDVHEHAINVSHGETASTSTSHQDLHSDSDDSHQDDRPSTSTQTPS 228
Query: 73 YHSSSSSS-NRLNNRS-SFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSL 130
SS+S+S N R+ SF R YG R S NSGLWIS EL++ V QI+A+I VL
Sbjct: 229 PQSSASTSPTAYNTRNLSFPRRDSMYGHGR-SIWNSGLWISFELVIYVVQIVAAIFVLVF 287
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
SR+E+P APLFAWI+GY GC+A++P++ WR +R++ + + P +P +
Sbjct: 288 SRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQE------------PEQPPA 335
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFG------GRLNGLVDHFKMALDCFFAVW 244
+Y ++++Q+S+ N RS+ T L+FG R + L HFK A+DCFFAVW
Sbjct: 336 AYPNLTSSQSSEGRNQRSSGT-------VLHFGCITISCPRPSILAYHFKTAVDCFFAVW 388
Query: 245 FVVGNVWIFGGHSSPSD---APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVL 301
FVVGNVWIFGGHS+ SD AP +YRLC+ FL SC+GYA+PF++CA ICCC PC+IS+L
Sbjct: 389 FVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLL 448
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG--TEGGVLAAGTEKERMIS 359
++ED TRGAT E I+ALPTYKFK K++ D +S +EGG+L GT+KER++S
Sbjct: 449 RLQEDLGHTRGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKERIVS 508
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
EDAVCCICL KY DDDELREL C+H FHV CVDKWLKINA CPLCK+EIG S
Sbjct: 509 AEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEIGGS 561
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/320 (61%), Positives = 235/320 (73%), Gaps = 24/320 (7%)
Query: 98 RRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPI 157
R+R SPLNSGLW+S+EL +T+SQIIASI+VL LSRNE+PQAPL W+ GYA+GC+ATLP+
Sbjct: 1 RQRPSPLNSGLWVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPL 60
Query: 158 LYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQ 217
LYWR+ HQ + + EP S+ +A N +S S T T +
Sbjct: 61 LYWRYT--HQYMRTR--------------EPAST-SASEPNPSSGGVGGSSYVTLTPGSR 103
Query: 218 NALNFGGR-LNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFS 276
+ + G R +G+ FK+ALDCFFA+WFVVGNVWIFGGHS+ DAP LYRLCIV LTFS
Sbjct: 104 DDMAHGSRQRSGVGQVFKIALDCFFAIWFVVGNVWIFGGHSAAHDAPNLYRLCIVLLTFS 163
Query: 277 CIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFK------SKK 330
CIGYAMPFILCATICCCLPCII++LG RED +Q RGA+ E I ALPTYKFK SK
Sbjct: 164 CIGYAMPFILCATICCCLPCIIALLGFREDQNQPRGASQEAIAALPTYKFKAKASNESKL 223
Query: 331 NGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVD 390
N + ND D+ G EGG +AAGTEKER +S +DAVCCICL KY D ELREL+C+H FHV+
Sbjct: 224 NKDGNDSDSEGAGEGGWVAAGTEKERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVE 283
Query: 391 CVDKWLKINASCPLCKSEIG 410
CVDKWLKINASCPLCK +IG
Sbjct: 284 CVDKWLKINASCPLCKYDIG 303
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/403 (50%), Positives = 268/403 (66%), Gaps = 33/403 (8%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS 80
ME +H I+++ + AS+S+S+ + +D PSTST PS SS+S+S
Sbjct: 1 MEHATCDDVHEHAINVSHGETASTSTSHQDLHSDSDDSHQDDRPSTSTQTPSPQSSASTS 60
Query: 81 -NRLNNRS-SFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQA 138
N R+ SF R YG R S NSGLWIS EL++ V QI+A+I VL SR+E+P A
Sbjct: 61 PTAYNTRNLSFPRRDSMYGHGR-SIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHA 119
Query: 139 PLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISAN 198
PLFAWI+GY GC+A++P++ WR +R++ + + P +P ++Y ++++
Sbjct: 120 PLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQE------------PEQPPAAYPNLTSS 167
Query: 199 QASDEENNRSTETETGNGQNALNFG------GRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
Q+S+ N RS+ T L+FG R + L HFK A+DCFFAVWFVVGNVWI
Sbjct: 168 QSSEGRNQRSSGT-------VLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVGNVWI 220
Query: 253 FGGHSSPSD---APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQ 309
FGGHS+ SD AP +YRLC+ FL SC+GYA+PF++CA ICCC PC+IS+L ++ED
Sbjct: 221 FGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQEDLGH 280
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGG--TEGGVLAAGTEKERMISGEDAVCCI 367
TRGAT E I+ALPTYKFK K++ D +S +EGG+L GT+KER++S EDAVCCI
Sbjct: 281 TRGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKERIVSAEDAVCCI 340
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
CL KY DDDELREL C+H FHV CVDKWLKINA CPLCK+EIG
Sbjct: 341 CLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEIG 383
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/389 (52%), Positives = 261/389 (67%), Gaps = 18/389 (4%)
Query: 28 TDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRLNNRS 87
+ RDH IDI D S+S+ + + + P S+S++ ++ +
Sbjct: 8 SHRDHTIDILRNDATFPSTSHQDNHNNLDELHQTRGPLNDVPHVPESSASATPASISRNA 67
Query: 88 SFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGY 147
SF R G+ R+ +PLNSG WIS+ELIV++SQIIA+I VLS+SRNE+P APL W++GY
Sbjct: 68 SFARRDQGH--RQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGY 125
Query: 148 ASGCVATLPILYWRFRNRH-QGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENN 206
GCVATLP LYWRF +R+ Q + +ST Q SS EP +SY +S+ S+
Sbjct: 126 TIGCVATLPHLYWRFLHRNRQNTEQESTN--QVSSERDVYEP-NSYVVVSSAHGSE---- 178
Query: 207 RSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLY 266
NG A R+ LV FK+ALDCFFAVWFVVGNVWIFGG +S DAP LY
Sbjct: 179 --VVDSGNNGGVARIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRTSLHDAPNLY 236
Query: 267 RLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF 326
RLCIVFL F IGYA+PFILC ICCCLPCIIS++GI ED RGATAE I+AL YKF
Sbjct: 237 RLCIVFLAFGFIGYALPFILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKF 296
Query: 327 KSKKNGNLNDQDNSGGTE-GGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSH 385
+SKK QD G + GGVLAAGT+KER IS EDAVCCICL+K+ ++++LREL C+H
Sbjct: 297 QSKKF-----QDGEAGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNH 351
Query: 386 VFHVDCVDKWLKINASCPLCKSEIGDSSS 414
VFH++CVDKWLKINA CPLCK+++G S++
Sbjct: 352 VFHLECVDKWLKINALCPLCKADLGGSTN 380
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/316 (61%), Positives = 232/316 (73%), Gaps = 20/316 (6%)
Query: 98 RRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPI 157
R+R SPLNSGLW+S+EL +T+SQIIASI+VL LSRNE+PQAPL W+ GYA+GC+ATLP+
Sbjct: 1 RQRPSPLNSGLWVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPL 60
Query: 158 LYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQ 217
LYWR+ HQ + + EP S+ +A N +S S T T +
Sbjct: 61 LYWRYT--HQYMRTR--------------EPAST-SASEPNPSSGGVGGSSYVTLTPGSR 103
Query: 218 NALNFGGRL-NGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFS 276
+ + G R +G+ FK+ALDCFFA+WFVVGNVWIFGGHS+ DAP LYRLCIV LTFS
Sbjct: 104 DDMAHGSRQRSGVGQVFKIALDCFFAIWFVVGNVWIFGGHSAAHDAPNLYRLCIVLLTFS 163
Query: 277 CIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG--NL 334
CIGYAMPFILCATICCCLPCII++LG RED +Q RGA+ E I ALPTYKFK+K + L
Sbjct: 164 CIGYAMPFILCATICCCLPCIIALLGFREDQNQPRGASQEAIAALPTYKFKAKASNESKL 223
Query: 335 NDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDK 394
N N +EG +AAGTEKER +S +DAVCCICL KY D ELREL+C+H FHV+CVDK
Sbjct: 224 NKDGNDSDSEGAWVAAGTEKERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDK 283
Query: 395 WLKINASCPLCKSEIG 410
WLKINASCPLCK +IG
Sbjct: 284 WLKINASCPLCKYDIG 299
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 260/387 (67%), Gaps = 22/387 (5%)
Query: 32 HIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTST-GVPSYHSSSSSSNRLNNRS-SF 89
H+I + + AS+S+S+ + P ED STST + S S S S + R+ SF
Sbjct: 11 HVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYSTRNLSF 70
Query: 90 MMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYAS 149
R YG R SP NSGLWIS E+++ ++Q++A+IV+L SR+E+P APLFAWI+GY
Sbjct: 71 PRRDSIYGHGR-SPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTL 129
Query: 150 GCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRST 209
GC+A+LP++YWR+ +R++ +D + P +P ++Y + +Q+S+ N+R++
Sbjct: 130 GCIASLPLIYWRYVHRNRHLDQE------------PQQPPTTYPTLIPSQSSEGRNHRTS 177
Query: 210 ETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA---PKLY 266
G +++ RL+ L HFK +DCFFAVWFVVGNVWIFGG S SDA P +Y
Sbjct: 178 GIVLHLGCISIS-CPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNMY 236
Query: 267 RLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF 326
RLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q RGAT E I+ALPTYKF
Sbjct: 237 RLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYKF 296
Query: 327 KSKKNGNLNDQDNSGGT---EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELIC 383
K K+ N S EGG+L GT+KER++S EDAVCCICL KY DDDELREL C
Sbjct: 297 KPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPC 356
Query: 384 SHVFHVDCVDKWLKINASCPLCKSEIG 410
+H FHV CVDKWLKINA CPLCK+EIG
Sbjct: 357 THFFHVQCVDKWLKINAVCPLCKTEIG 383
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/388 (51%), Positives = 263/388 (67%), Gaps = 22/388 (5%)
Query: 31 DHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRL--NNRSS 88
+H+I + + AS+S+S+ + P ED STST PS SS S S + S
Sbjct: 11 EHVISVAHGETASTSTSHQDMYSDSDEPHQEDRQSTSTQTPSSESSPSISPIAYSSRNLS 70
Query: 89 FMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYA 148
F R YG R SP NSGLWIS E+++ ++Q++A+IV+L SR+E+P APLFAWI+GY
Sbjct: 71 FPRRDSIYGHGR-SPWNSGLWISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYT 129
Query: 149 SGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRS 208
GC+A+LP++YWR+ +R++ +D + P +P ++Y ++ +Q+S+ N+R+
Sbjct: 130 VGCIASLPLIYWRYVHRNRHLDQE------------PQQPPTTYPTLTPSQSSEGRNHRT 177
Query: 209 TETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA---PKL 265
+ G A++ RL+ L HFK A+DCFFAVWFVVGNVWIFGG S SDA P +
Sbjct: 178 SGIVLRLGCIAIS-CPRLSVLAYHFKTAVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNM 236
Query: 266 YRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYK 325
YRLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q RGAT E I+ALPTYK
Sbjct: 237 YRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYK 296
Query: 326 FKSKKNGNLNDQDNSGGT---EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELI 382
FK K+N N S EGG+L GT+KER++S EDAVCCICL KY DDDELREL
Sbjct: 297 FKPKRNKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRELP 356
Query: 383 CSHVFHVDCVDKWLKINASCPLCKSEIG 410
C+H FHV CVDKWLKINA CPLCK+EIG
Sbjct: 357 CTHFFHVQCVDKWLKINAVCPLCKTEIG 384
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 261/387 (67%), Gaps = 22/387 (5%)
Query: 32 HIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTST-GVPSYHSSSSSSNRLNNRS-SF 89
H+I + + AS+S+S+ + P ED STST + S S S S + R+ SF
Sbjct: 11 HVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYSTRNLSF 70
Query: 90 MMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYAS 149
R YG R SP NSGLWIS E+++ ++Q++A+IV+L SR+E+P APLFAWI+GY
Sbjct: 71 PRRDSIYGHGR-SPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTL 129
Query: 150 GCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRST 209
GC+A+LP++YWR+ +R++ +D + P +P ++Y ++ +Q+S+ N+R++
Sbjct: 130 GCIASLPLIYWRYVHRNRHLDQE------------PQQPPTTYPTLTPSQSSEGRNHRTS 177
Query: 210 ETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA---PKLY 266
G +++ RL+ L HFK +DCFFAVWFVVGNVWIFGG S SDA P +Y
Sbjct: 178 GIVLHLGCISIS-CPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNMY 236
Query: 267 RLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF 326
RLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q RGAT E I+ALPTYKF
Sbjct: 237 RLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYKF 296
Query: 327 KSKKNGNLNDQDNSGGT---EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELIC 383
K K+ N S EGG+L GT+KER++S EDAVCCICL KY DDDELREL C
Sbjct: 297 KPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPC 356
Query: 384 SHVFHVDCVDKWLKINASCPLCKSEIG 410
+H FHV CVDKWLKINA CPLCK+EIG
Sbjct: 357 THFFHVQCVDKWLKINAVCPLCKTEIG 383
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/387 (50%), Positives = 260/387 (67%), Gaps = 21/387 (5%)
Query: 31 DHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS-NRLNNRSSF 89
+H+I++ + AS+S+S+ + P ED PSTST PS SS+S+S ++R+
Sbjct: 10 EHVINVAHGETASTSTSHQDLHSDTDEPHQEDRPSTSTRTPSPQSSASTSPTAYSSRNLS 69
Query: 90 MMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYAS 149
R D + R S NSGLWIS E ++ V+QI A+IV+L LSR+E P APL AWI+GY
Sbjct: 70 FPRRDSFYGRGTSLWNSGLWISFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYTV 129
Query: 150 GCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRST 209
GC A+LP++YWR+ +R++ + + Q T P TSS +S+ N R++
Sbjct: 130 GCTASLPLVYWRYVHRNRPSEEEPEQPPT-----TYPTLTSS--------SSEGRNQRTS 176
Query: 210 ETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA---PKLY 266
+ G + R + L H K A+DCFFA+WFVVGNVWIFGG + SDA P +Y
Sbjct: 177 GSVLHLGCITIA-CPRPSILAYHSKTAVDCFFAIWFVVGNVWIFGGRGTSSDAQDAPNMY 235
Query: 267 RLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF 326
RLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q+RGAT E I+ALPTYKF
Sbjct: 236 RLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQSRGATQELIDALPTYKF 295
Query: 327 KSKKNGN--LNDQDNSGG-TEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELIC 383
K K++ N L+ +S +EGG+L GT+KER++S EDAVCCICL KY DDDELREL C
Sbjct: 296 KPKRSKNWVLDHASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELRELPC 355
Query: 384 SHVFHVDCVDKWLKINASCPLCKSEIG 410
+H+FHV CVDKWLKINA CPLCK+EIG
Sbjct: 356 NHLFHVQCVDKWLKINAVCPLCKTEIG 382
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/400 (50%), Positives = 262/400 (65%), Gaps = 22/400 (5%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS 80
M Q + RDH IDI +D S S+S+ + P + H PS P SS ++
Sbjct: 1 MAQTGNLSQRDHTIDIPMSDGTSPSTSHQDDPSGLDELHHSRGPSNEVP-PGPERSSGTN 59
Query: 81 NRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPL 140
+ ++ ++ R D G R+++PLNSG WIS+ELIV +SQI+A+I VLS+SRNE+P APL
Sbjct: 60 DASDSHNASSARID-RGHRQQNPLNSGFWISIELIVNLSQIVAAIAVLSVSRNEHPHAPL 118
Query: 141 FAWIVGYASGCVATLPILYWRF--RNR---HQGIDSDSTQLRQGSSLPTPPEPTSSYTAI 195
F W++GY GC+A LP LYWR+ RNR Q + S R S T+SY A+
Sbjct: 119 FTWLLGYTIGCIAILPHLYWRYLHRNRPNMEQEMTPQSLSERNMSE-------TNSYAAV 171
Query: 196 SANQASDEENNRSTETETGNGQNALNFGG-RLNGLVDHFKMALDCFFAVWFVVGNVWIFG 254
S+ + S+ + ++ TG + L R +V FK+ LDCFFAVWFVVGNVWIFG
Sbjct: 172 SSPRTSEAVDGTNS---TGVSRMNLPLASPRFYAMVACFKLMLDCFFAVWFVVGNVWIFG 228
Query: 255 GHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGAT 314
SS DAP LYR+CIVFL F I YA+PFILC ICCCLPCIIS+LG+ ED RGAT
Sbjct: 229 SRSSAHDAPNLYRICIVFLAFGFIVYALPFILCTMICCCLPCIISILGVHEDLDLNRGAT 288
Query: 315 AETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVD 374
E IN L YKF+SK+ + G GGVLAAGT+KER+IS EDA+CCICL+K+ +
Sbjct: 289 TEAINTLVAYKFQSKR----VHDGDVGEDGGGVLAAGTDKERIISAEDAICCICLSKFSN 344
Query: 375 DDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
+++LREL C+HVFH++C+DKWL+INA CPLCK+EIG S++
Sbjct: 345 NEDLRELPCAHVFHMECIDKWLQINALCPLCKAEIGGSTT 384
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 261/394 (66%), Gaps = 24/394 (6%)
Query: 28 TDRDHIIDITTTDDASSSSSYDE------QPHRMASPQHEDIPSTSTGVPSYHSSSSSSN 81
+ RDH IDI +D ++S+S+ + + HR P +E PS T SS +N
Sbjct: 8 SQRDHTIDIPMSDGMTASTSHQDDHSGSDELHRSRGPSNEVSPSPDT--------SSGTN 59
Query: 82 RLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLF 141
++N + G R+++PLNSG WIS+ELIV +SQI+A++VVLS+SRNE+PQAPLF
Sbjct: 60 DVSNSHNASSARIDRGHRQQNPLNSGFWISIELIVNLSQIVAAVVVLSVSRNEHPQAPLF 119
Query: 142 AWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQAS 201
W++GY GC+A LP LYWR+ +R++ +D + Q S E +SY +S+ AS
Sbjct: 120 TWLLGYTIGCIAILPHLYWRYLHRNR-LDMEQEMPPQRSPGMNISE-INSYAVVSSPHAS 177
Query: 202 DE-ENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPS 260
+ E ST N A R +V FK+ LDCFFAVWFVVGNVW+FG SS
Sbjct: 178 EAVEGANSTGVSRTNLPMA---SPRFYAMVACFKLVLDCFFAVWFVVGNVWMFGSRSSAH 234
Query: 261 DAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINA 320
DAP LYR+C+VFL F IGYA+PFILC ICCCLPCIISVLG+ ED RGAT E IN
Sbjct: 235 DAPNLYRICLVFLAFGFIGYALPFILCTMICCCLPCIISVLGVHEDLDMNRGATTEAINT 294
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRE 380
L YKF+SK+ + GG GGVLAAGT+KER IS EDA+CCICL+K+ ++++LRE
Sbjct: 295 LVAYKFQSKR----VHDGDVGGDGGGVLAAGTDKERTISAEDAICCICLSKFSNNEDLRE 350
Query: 381 LICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
L C+HVFH++C+DKWL+INA CPLCK+EIG S +
Sbjct: 351 LPCAHVFHMECIDKWLQINALCPLCKAEIGGSKA 384
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/195 (78%), Positives = 171/195 (87%), Gaps = 1/195 (0%)
Query: 224 GRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMP 283
GRL LV++FKMALDCFFAVWFVVGNVWIFGGHSS S+AP LYRLCIVFLTFSCIGYAMP
Sbjct: 336 GRLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMP 395
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD-NSGG 342
FILCATICCCLPCIIS+LG RED +QTRGAT+E+INALPTYKFK KKN N +D++ NSG
Sbjct: 396 FILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGA 455
Query: 343 TEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
EGGV+AAGTE+ER+ISGEDAVCCICLAKY ++DELREL CSH FH +CVDKWLKINA C
Sbjct: 456 GEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALC 515
Query: 403 PLCKSEIGDSSSPLV 417
PLCK E+ LV
Sbjct: 516 PLCKREVKKGCKILV 530
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 153/234 (65%), Gaps = 11/234 (4%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPH-RMASPQ 59
M + SL L +++D YPLLMEQ D +H+IDIT + DASSS+S ++ P + Q
Sbjct: 1 MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHVIDITRSGDASSSNSSNDGPSTSLDQLQ 60
Query: 60 HEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
H+D P++S VP S SSSN N+R+SF R D RRRRSPLNSGLWIS+EL +TVS
Sbjct: 61 HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRADA--RRRRSPLNSGLWISIELALTVS 118
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQ- 178
QIIAS VVLSLSR+E+P APLF WIVGYASGCVATLPILYWRFR+R+QG + +S Q RQ
Sbjct: 119 QIIASXVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQV 178
Query: 179 --GSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLV 230
S+LP P ++S S+ E+ + + T N Q+ R +V
Sbjct: 179 SFHSNLPGGPT-----FSLSVTGTSEXEDRQPSVPATRNSQSVRRLSARYEFVV 227
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/384 (45%), Positives = 236/384 (61%), Gaps = 48/384 (12%)
Query: 32 HIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTG-VPSYHSSSSSSNRLNNRS-SF 89
H+I + + AS+S+S+ + P ED STST + S S S S + R+ SF
Sbjct: 11 HVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYSTRNLSF 70
Query: 90 MMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYAS 149
R YG R SP NSGLWIS E+++ ++Q++A+IV+L SR+E+P APLFAWI+GY
Sbjct: 71 PRRDSIYGHGR-SPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTL 129
Query: 150 GCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRST 209
GC+A+LP++YWR+ +R++ +D + P +P ++Y ++ +Q+S+ N+R++
Sbjct: 130 GCIASLPLIYWRYVHRNRHLDQE------------PQQPPTTYPTLTPSQSSEGRNHRTS 177
Query: 210 ETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLC 269
G+V H ++ S DAP +YRLC
Sbjct: 178 ------------------GIVLHLGCISISCPSI------------SSDAQDAPNMYRLC 207
Query: 270 IVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSK 329
+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q RGAT E I+ALPTYKFK K
Sbjct: 208 LAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTYKFKPK 267
Query: 330 KNGNLNDQDNSGGT---EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHV 386
+ N S EGG+L GT+KER++S EDAVCCICL KY DDDELREL C+H
Sbjct: 268 RVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHF 327
Query: 387 FHVDCVDKWLKINASCPLCKSEIG 410
FHV CVDKWLKINA CPLCK+EIG
Sbjct: 328 FHVQCVDKWLKINAVCPLCKTEIG 351
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/179 (75%), Positives = 154/179 (86%), Gaps = 1/179 (0%)
Query: 235 MALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCL 294
MALDCFFAVWFVVGNVWIFGG SS +DAP LYRLCIVFLTFSCIGYAMPFILCA ICCCL
Sbjct: 1 MALDCFFAVWFVVGNVWIFGGRSSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCL 60
Query: 295 PCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK 354
PCIISV+G RED + TRGAT+E+IN+LPTYKFK+KK + + + + G +GG++AAGT+K
Sbjct: 61 PCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRH-SSGNEAEGQDGGIVAAGTDK 119
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
ER +S EDAVCCICLAKY +DELREL C+H FH +CVDKWLKINA CPLCKSEI SS
Sbjct: 120 ERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEIASSS 178
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/227 (58%), Positives = 167/227 (73%), Gaps = 7/227 (3%)
Query: 190 SSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGN 249
++Y ++++Q+S+ N R++ T G ++ R + L H K A+DCFFAVWFVVGN
Sbjct: 61 TTYPTLTSSQSSEGRNQRTSGTVLHLGCITVSCP-RPSILAYHSKTAVDCFFAVWFVVGN 119
Query: 250 VWIFGGHSSPSDA---PKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIRED 306
VWIFGG + SDA P +YRLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED
Sbjct: 120 VWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVGYAVPFIMCAAICCCFPCLISVLRLQED 179
Query: 307 YSQTRGATAETINALPTYKFKSK--KNGNLNDQDNSGG-TEGGVLAAGTEKERMISGEDA 363
QTRGAT E I ALPTYKFK + KN L+ +S +EGG+L GT+KER +S EDA
Sbjct: 180 LGQTRGATQELIEALPTYKFKPRRSKNWGLDYASSSENLSEGGILGPGTKKERTVSAEDA 239
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
VCCICL KY DDDELREL C+H+FHV CVDKWLKINA CPLCK++IG
Sbjct: 240 VCCICLTKYGDDDELRELPCTHLFHVQCVDKWLKINAVCPLCKTDIG 286
>gi|297743323|emb|CBI36190.3| unnamed protein product [Vitis vinifera]
Length = 920
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 179/311 (57%), Gaps = 62/311 (19%)
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSR-NENPQAPLFAWIVGYASGCVATLPILYWRF 162
SGLWIS++ I++V QI+ASIVVLSLS+ N +P LF+W+VGYA GCV LP+LY R
Sbjct: 38 FESGLWISLQFILSVIQIVASIVVLSLSKLNGDPDYKLFSWVVGYACGCVLMLPLLYCR- 96
Query: 163 RNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF 222
Y I + L
Sbjct: 97 -----------------------------YILILVKK--------------------LFL 107
Query: 223 GGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAM 282
RL G+V+ KM+L CFFAVWFV+GNVW+FG S+ D KL LC+VFL CI YAM
Sbjct: 108 ICRLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSSSTGKDDTKLETLCLVFLASGCIMYAM 167
Query: 283 PFILCATICCCLPCIISVLGIREDYSQTRGATAE-TINALPTYKFKSKKNGNLNDQDNSG 341
P CA C LP +I + + Q R A + + NALPTY FK K+NG
Sbjct: 168 PVFRCAAFCLLLPFLI-LPTLASPQEQAREANPDYSFNALPTYNFKLKENGT-------- 218
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
E GVLAAGT+KER ISGEDAVCCICL KY D+DE+REL CSH FHV+CVDKWLKIN
Sbjct: 219 -GESGVLAAGTDKERAISGEDAVCCICLGKYADNDEVRELPCSHFFHVECVDKWLKINPR 277
Query: 402 CPLCKSEIGDS 412
CPLC+SE+G +
Sbjct: 278 CPLCQSELGGA 288
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 123/189 (65%), Gaps = 12/189 (6%)
Query: 226 LNGLVDHFKMALDCFFAVWFVVGNVWIFGG-HSSPSDAPKLYRLCIVFLTFSCIGYAMPF 284
L G+V FKM L CFF VW V+G VWI G S DA L LC+V C YA+P
Sbjct: 343 LFGVVRFFKMTLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPG 402
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
+ A++C LPC+I + + + RGAT E+IN LPTYKFKSK+NG E
Sbjct: 403 MRFASLCLFLPCLICA-TLVSPHEKPRGATPESINELPTYKFKSKENGR---------GE 452
Query: 345 GGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCP 403
GGV AAGT KER +S EDAVCCICL +Y D++ELREL CSH FH +CVD+WLKI A CP
Sbjct: 453 GGVWAAGTIKERTLSEEDAVCCICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCP 512
Query: 404 LCKSEIGDS 412
LC+SE+G +
Sbjct: 513 LCQSELGGA 521
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 107/186 (57%), Gaps = 36/186 (19%)
Query: 225 RLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF 284
RL +V+ KM L CFFA WFV+GN+W SDA KL LC + L +CI YA+P
Sbjct: 734 RLYVVVEVLKMVLGCFFAFWFVLGNIW---AARVSSDAEKLDMLCQLLLKTACIMYAIPA 790
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I C LP +IS +AL + +N N D G
Sbjct: 791 IGCFL----LPRMIS-------------------SAL-----MAPRNLTKNGTDAVG--- 819
Query: 345 GGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPL 404
VLAAGTE+ER IS EDAVCCICL KYVD+DELREL C H FH +CVD+WLKINA CPL
Sbjct: 820 --VLAAGTEQERAISEEDAVCCICLEKYVDNDELRELPCGHFFHKECVDEWLKINARCPL 877
Query: 405 CKSEIG 410
C+SEI
Sbjct: 878 CQSEIA 883
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 113/190 (59%), Gaps = 15/190 (7%)
Query: 223 GGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAM 282
G ++ +++ F + + CFF VWFV G+V FG SS DAP L L L C YAM
Sbjct: 544 GEEVSKVMEVFWLTMSCFFVVWFVFGSVCFFGVSSSIHDAPILEGLFKALLLSGCTIYAM 603
Query: 283 PFILCATICCCLPCIISVLGIREDYSQTRGATA--ETINALPTYKFKSKKNGNLNDQDNS 340
P I A+ C +I L + + + RG + N LPTYKFKSK+NG
Sbjct: 604 PGIAIASYCLFFSWLILSLLLLKLREKHRGTSTPDSPPNVLPTYKFKSKENGG------- 656
Query: 341 GGTEGGVLAAGTEKERM-ISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKI 398
G +LAAGT+K+ +SGED VCCICL Y D++ELREL CSH FHV+CVDKWLKI
Sbjct: 657 ----GVLLAAGTKKKSASLSGEDVVCCICLGNYADNEELRELPCCSHFFHVECVDKWLKI 712
Query: 399 NASCPLCKSE 408
A CPLC+SE
Sbjct: 713 KARCPLCQSE 722
>gi|225442723|ref|XP_002280502.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 295
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 178/312 (57%), Gaps = 60/312 (19%)
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAP-LFAWIVGYASGCVATLPILYWRF 162
L+SGL +S++LI+TV+Q++AS+VVL +S + + P LF W++GYASGC LP+LY R+
Sbjct: 36 LDSGLCLSIQLILTVTQMVASLVVLWVSMAQEHRYPKLFPWVMGYASGCALMLPLLYSRY 95
Query: 163 RNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF 222
+ A + N S EE +
Sbjct: 96 -----------------------------HIARTLNLGSSEEAEK--------------- 111
Query: 223 GGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGG-HSSPSDAPKLYRLCIVFLTFSCIGYA 281
L G+V FKM L CFF VW V+G VWI G S DA L LC+V C YA
Sbjct: 112 ---LFGVVRFFKMTLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYA 168
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
+P + A++C LPC+I + + + RGAT E+IN LPTYKFKSK+NG
Sbjct: 169 IPGMRFASLCLFLPCLICA-TLVSPHEKPRGATPESINELPTYKFKSKENGR-------- 219
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINA 400
EGGV AAGT KER +S EDAVCCICL +Y D++ELREL CSH FH +CVD+WLKI A
Sbjct: 220 -GEGGVWAAGTIKERTLSEEDAVCCICLGQYADNEELRELPCCSHFFHAECVDQWLKIKA 278
Query: 401 SCPLCKSEIGDS 412
CPLC+SE+G +
Sbjct: 279 CCPLCQSELGGA 290
>gi|147815560|emb|CAN70531.1| hypothetical protein VITISV_010219 [Vitis vinifera]
Length = 305
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 136/201 (67%), Gaps = 13/201 (6%)
Query: 225 RLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF 284
+L G+V+ KM+L CFFAVWFV+GNVW+FG S+ D KL LC+VFL CI YAMP
Sbjct: 104 QLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSSSTGKDDTKLETLCLVFLASGCIMYAMPV 163
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAE-TINALPTYKFKSKKNGNLNDQDNSGGT 343
CA C LP +I + + Q R A + + NALPTY FK K+NG
Sbjct: 164 XRCAAFCLLLPFLI-LPTLASPQEQAREANPDYSFNALPTYNFKLKENGT---------G 213
Query: 344 EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
E GVLAAGT+KER ISGEDAVCCICL KY D+DE+REL CSH FHV+CVDKWLKIN CP
Sbjct: 214 ESGVLAAGTDKERAISGEDAVCCICLGKYADNDEVRELPCSHFFHVECVDKWLKINPRCP 273
Query: 404 LCKSEIGDS--SSPLVQDSAQ 422
LC+SE+G + +S LV S+Q
Sbjct: 274 LCQSELGGAGGASTLVTHSSQ 294
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSR-NENPQAPLFAWIVGYASGCVATLPILYWRF 162
SGLWIS++ I++V QI+ASIVVLSLS+ N + LF+W+VGYA GCV LP+LY R+
Sbjct: 36 FESGLWISLQFILSVIQIVASIVVLSLSKXNGDXDYKLFSWVVGYACGCVLMLPLLYCRY 95
Query: 163 RNR 165
R
Sbjct: 96 IVR 98
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 114/149 (76%), Gaps = 3/149 (2%)
Query: 265 LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTY 324
+YRLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q RGAT E I+ALPTY
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTY 60
Query: 325 KFKSKKNGNLNDQDNSGGT---EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL 381
KFK K+ N S EGG+L GT+KER++S EDAVCCICL KY DDDELREL
Sbjct: 61 KFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELREL 120
Query: 382 ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C+H FHV CVDKWLKINA CPLCK+EIG
Sbjct: 121 PCTHFFHVQCVDKWLKINAVCPLCKTEIG 149
>gi|147815561|emb|CAN70532.1| hypothetical protein VITISV_010220 [Vitis vinifera]
Length = 232
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 150/282 (53%), Gaps = 59/282 (20%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E+ LF W++GYASGC LP+LY R+
Sbjct: 3 QEHRYPKLFPWVMGYASGCALMLPLLYSRYX----------------------------- 33
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
A + N S EE + L G+V FKM L CFF VW V+G VWI
Sbjct: 34 IARTLNLGSSEEAEK------------------LFGVVRFFKMTLSCFFLVWLVLGIVWI 75
Query: 253 FGG-HSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTR 311
G S DA L LC+V C YA+P + A++C LPC+I + + + R
Sbjct: 76 PGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCLFLPCLICA-TLVSPHEKPR 134
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
GAT E+IN LPTYKFKSK+NG EGGV AAGT KER +S EDAVCCICL +
Sbjct: 135 GATPESINELPTYKFKSKENGR---------GEGGVWAAGTIKERTLSEEDAVCCICLGQ 185
Query: 372 YVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
Y D++ELREL CSH FH +CVD+WLKI A CPLC+SE+G +
Sbjct: 186 YADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSELGGA 227
>gi|255639547|gb|ACU20068.1| unknown [Glycine max]
Length = 168
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 124/163 (76%), Gaps = 1/163 (0%)
Query: 1 MDVRSLGLIRDTETDQYPLLMEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQH 60
MDV SLG +T+TDQ+PLLMEQ H+IDIT +A ++S ++Q M Q+
Sbjct: 1 MDVTSLGSNSNTQTDQHPLLMEQPETRNGHQHVIDITRNGEALTTSYRNDQHSEMHLTQN 60
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNR-SSFMMRGDGYGRRRRSPLNSGLWISVELIVTVS 119
+D P+ S+ ++SSS+ RLN+R S+ + RGDGYG R RSPLNSGLWISVEL+VTVS
Sbjct: 61 QDQPAGDAQDSSHQTTSSSAPRLNSRNSASLRRGDGYGHRGRSPLNSGLWISVELVVTVS 120
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRF 162
QIIASIVVLSLSRNENPQAPLFAWIVGY SGCVATLPILYWRF
Sbjct: 121 QIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRF 163
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 171/329 (51%), Gaps = 57/329 (17%)
Query: 88 SFMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
SF+ R Y RS P NS W+ +E I V QI LS+S+ E P P+
Sbjct: 63 SFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRI 122
Query: 143 WIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASD 202
WIVGY GCV +L +LYWR++ + QG P D
Sbjct: 123 WIVGYDFGCVLSLLLLYWRYQRPYSA---------QGDGFSLP----------------D 157
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSD 261
E R+ E R + L++ + +L+ FFA+WFV+GNVW+F S
Sbjct: 158 IEQQRNNEE------------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHR 205
Query: 262 APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINA 320
APKL+ LCI L ++ I Y+ PF+L +CCC+P + ++LG + S +GA+ + I+
Sbjct: 206 APKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISR 265
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRE 380
LP+++FK + N NL+ L G + +S E CCICLAKY + +E+R+
Sbjct: 266 LPSWRFK-EANANLD------------LPNGADSNSPLSSEYPECCICLAKYREKEEVRQ 312
Query: 381 LICSHVFHVDCVDKWLKINASCPLCKSEI 409
L CSH+FH+ CVD+WL+I + CPLCK EI
Sbjct: 313 LPCSHMFHLKCVDQWLRIISCCPLCKQEI 341
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 171/329 (51%), Gaps = 57/329 (17%)
Query: 88 SFMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
SF+ R Y RS P NS W+ +E I V QI LS+S+ E P P+
Sbjct: 63 SFLRRVFHYQNGSRSDLGANPFNSNTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRI 122
Query: 143 WIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASD 202
WIVGY GCV +L +LYWR++ + QG P D
Sbjct: 123 WIVGYDFGCVLSLLLLYWRYQRPYSA---------QGDGFSLP----------------D 157
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSD 261
E R+ E R + L++ + +L+ FFA+WFV+GNVW+F S
Sbjct: 158 IEQQRNNEE------------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHR 205
Query: 262 APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINA 320
APKL+ LCI L ++ I Y+ PF+L +CCC+P + ++LG + S +GA+ + I+
Sbjct: 206 APKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISR 265
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRE 380
LP+++FK + N NL+ L G + +S E CCICLAKY + +E+R+
Sbjct: 266 LPSWRFK-EANANLD------------LPNGADSNSPLSSEYPECCICLAKYREKEEVRQ 312
Query: 381 LICSHVFHVDCVDKWLKINASCPLCKSEI 409
L CSH+FH+ CVD+WL+I + CPLCK EI
Sbjct: 313 LPCSHMFHLKCVDQWLRIISCCPLCKQEI 341
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 171/329 (51%), Gaps = 57/329 (17%)
Query: 88 SFMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
SF+ R Y RS P NS W+ +E I V QI LS+S+ E P P+
Sbjct: 32 SFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRI 91
Query: 143 WIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASD 202
WIVGY GCV +L +LYWR++ + QG P D
Sbjct: 92 WIVGYDFGCVLSLLLLYWRYQRPYSA---------QGDGFSLP----------------D 126
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSD 261
E R+ E R + L++ + +L+ FFA+WFV+GNVW+F S
Sbjct: 127 IEQQRNNEE------------SRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHR 174
Query: 262 APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINA 320
APKL+ LCI L ++ I Y+ PF+L +CCC+P + ++LG + S +GA+ + I+
Sbjct: 175 APKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISR 234
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRE 380
LP+++FK + N NL+ L G + +S E CCICLAKY + +E+R+
Sbjct: 235 LPSWRFK-EANANLD------------LPNGADSNSPLSSEYPECCICLAKYREKEEVRQ 281
Query: 381 LICSHVFHVDCVDKWLKINASCPLCKSEI 409
L CSH+FH+ CVD+WL+I + CPLCK EI
Sbjct: 282 LPCSHMFHLKCVDQWLRIISCCPLCKQEI 310
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 175/328 (53%), Gaps = 54/328 (16%)
Query: 89 FMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAW 143
F+ R Y RS P NSG W+++EL+ + Q+I S L++S+ E P P+ W
Sbjct: 33 FLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWPMRLW 92
Query: 144 IVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDE 203
I GY GCV +L +LY R R + R G+SL SD
Sbjct: 93 IGGYDLGCVLSLLLLYGRHRYHY-------LMQRDGNSL------------------SDI 127
Query: 204 ENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDA 262
E+ + E+ R + L++ + +LD FFA+WFV+GN+W F +S A
Sbjct: 128 EHEQQRTNESS----------RYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRA 177
Query: 263 PKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINAL 321
PKL+ LC L ++ I Y+ PFIL +CCC+P I S+ G + T +GA+ + I+ L
Sbjct: 178 PKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQL 237
Query: 322 PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL 381
P +++K+ + N+N + + G+L ED CCICLAKY+D +E+R+L
Sbjct: 238 PCWRYKAVE-ANINPRSQLDNSNTGLLK-----------EDPECCICLAKYIDKEEVRQL 285
Query: 382 ICSHVFHVDCVDKWLKINASCPLCKSEI 409
CSHVFH+ CVDKWL I +SCPLCK ++
Sbjct: 286 PCSHVFHLRCVDKWLAITSSCPLCKQQL 313
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 170/310 (54%), Gaps = 49/310 (15%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NSG W+++EL+ + Q+I S L++S+ E P P+ WI GY GCV +L +LY R
Sbjct: 35 NPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGR 94
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
R + R G+SL SD E+ + E+
Sbjct: 95 HRYHY-------LMQRDGNSL------------------SDIEHEQQRTNESS------- 122
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
R + L++ + +LD FFA+WFV+GN+W F +S APKL+ LC L ++ I Y
Sbjct: 123 ---RYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICY 179
Query: 281 AMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDN 339
+ PFIL +CCC+P I S+ G + T +GA+ + I+ LP +++K+ + N+N +
Sbjct: 180 SFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVE-ANINPRSQ 238
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
+ G+L ED CCICLAKY+D +E+R+L CSHVFH+ CVDKWL I
Sbjct: 239 LDNSNTGLLK-----------EDPECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAIT 287
Query: 400 ASCPLCKSEI 409
+SCPLCK ++
Sbjct: 288 SSCPLCKQQL 297
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 166/328 (50%), Gaps = 63/328 (19%)
Query: 89 FMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAW 143
F+ R Y RS P NS W++VEL+ V Q+ ++ VL++S E P P+ W
Sbjct: 65 FLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWPMRLW 124
Query: 144 IVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDE 203
IVGY GC+ +L +LY R+ + + L G + SD
Sbjct: 125 IVGYDLGCILSLLLLYGRYWHLY---------LMHGERV----------------GLSDT 159
Query: 204 ENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDA 262
E R+++ R L++ + +L+ FFA+WFV+GNVWI SS A
Sbjct: 160 EQRRTSQ------------ASRSLHLMNKCRTSLELFFAIWFVMGNVWIVDSRFSSFQRA 207
Query: 263 PKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINAL 321
PKL+ LC+ L ++ I Y+ PFIL +CCC+P + S+LG + T + A + I+ L
Sbjct: 208 PKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNISMASTDKAALDDQISQL 267
Query: 322 PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL 381
P +++K ++ N G + ED CCICL KY D++E+R+L
Sbjct: 268 PCWRYKV---SSMQPDSNEG----------------LPKEDPECCICLVKYRDEEEVRQL 308
Query: 382 ICSHVFHVDCVDKWLKINASCPLCKSEI 409
CSH FH+ CVDKWL I +SCPLCK ++
Sbjct: 309 PCSHFFHLRCVDKWLSITSSCPLCKQQL 336
>gi|194693834|gb|ACF81001.1| unknown [Zea mays]
Length = 156
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 99/128 (77%), Gaps = 4/128 (3%)
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
MPFILCA ICCCLPCIIS++G RED + RGAT++ INAL TY+F+SKK N +
Sbjct: 1 MPFILCALICCCLPCIISLMGFREDLDENRGATSDAINALGTYRFRSKKPRNGE----AN 56
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
GGV A GT+KER +S EDAVCCICLA+YVD+D+LR L C H FH DCVDKWLKINA
Sbjct: 57 EGGGGVFAPGTDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINAL 116
Query: 402 CPLCKSEI 409
CPLCK+EI
Sbjct: 117 CPLCKAEI 124
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 179/359 (49%), Gaps = 71/359 (19%)
Query: 64 PSTSTGVPSYHSSSSSSNRLNNRSS------FMMRGDGYGRRRRS-----PLNSGLWISV 112
P +S+ P S+ + R R S F+ R Y RS P NS W+++
Sbjct: 3 PPSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSSGWLAL 62
Query: 113 ELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSD 172
EL V ++Q++ + V++ S E P PL W+ Y G V +LP+LYWR R+ G
Sbjct: 63 ELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSSGA--- 119
Query: 173 STQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDH 232
+G +L PE + A+D NRS L++
Sbjct: 120 -----RGGTLSDDPE---------MHGANDPLRNRSY-------------------LMNK 146
Query: 233 FKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATIC 291
+ L+ FFA+WFV+GNVW+F S AP+LY LCI L ++ + Y++PF+L +C
Sbjct: 147 ARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVYSLPFLLFLLLC 206
Query: 292 CCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
C +P + LG + + RGA+ E + ALP ++FK + D+D+
Sbjct: 207 CFVPAVGYALGYNMNSASVGRGASDEQLAALPQWRFKEPADAP-RDRDH----------- 254
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+D CCICLA+Y + +E+R+L C+H+FH+ CVD+WL+I +SCPLCK E+
Sbjct: 255 ----------DDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 303
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 179/359 (49%), Gaps = 71/359 (19%)
Query: 64 PSTSTGVPSYHSSSSSSNRLNNRSS------FMMRGDGYGRRRRS-----PLNSGLWISV 112
P +S+ P S+ + R R S F+ R Y RS P NS W+++
Sbjct: 3 PPSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGWLAL 62
Query: 113 ELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSD 172
EL V ++Q++ + V++ S E P PL W+ Y G V +LP+LYWR R+ G
Sbjct: 63 ELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSSGA--- 119
Query: 173 STQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDH 232
+G +L PE + A+D NRS L++
Sbjct: 120 -----RGGTLSDDPE---------MHGANDPLRNRSY-------------------LMNK 146
Query: 233 FKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATIC 291
+ L+ FFA+WFV+GNVW+F S AP+LY LCI L ++ + Y++PF+L +C
Sbjct: 147 ARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVYSLPFLLFLLLC 206
Query: 292 CCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
C +P + LG + + RGA+ E + ALP ++FK + D+D+
Sbjct: 207 CFVPAVGYALGYNMNSASVGRGASDEQLAALPQWRFKEPADAP-RDRDH----------- 254
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+D CCICLA+Y + +E+R+L C+H+FH+ CVD+WL+I +SCPLCK E+
Sbjct: 255 ----------DDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 303
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 150/293 (51%), Gaps = 40/293 (13%)
Query: 127 VLSLSRNENPQAPLFAWIVGYA-SGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTP 185
VL+LS +E+P PL AWIVGY G + +L ++ R R S +
Sbjct: 97 VLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRTATISGTH----------- 145
Query: 186 PEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWF 245
+ S S + SDEE S + G+G N + H + A +W+
Sbjct: 146 ---SGSNVEWSFSSESDEEFYPSEQFLEGDG----------NSITKHIESANTMLSFIWW 192
Query: 246 VVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSC----IGYAMPFILCATICCCLPCIISV 300
+VG W+ GG S D+P+LY LCI FL+F I A+ ++ +CCCLPCI+++
Sbjct: 193 IVGFYWVTAGGQSLTRDSPQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAI 252
Query: 301 LGIREDYSQTRGATAETINALPTYKF----KSKKNGNLNDQDNSGGTEGGVLAAGTEKER 356
L + D GAT E I LP YKF + KK G++ + TE + T E
Sbjct: 253 LYVVAD---QEGATKEEIEQLPKYKFIIIKEFKKEGDIEESSRGIMTES---ESETATEH 306
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+I+ EDA CCICL+ Y D ELREL C+H FH C+DKWL INA+CPLCK I
Sbjct: 307 VIALEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLINATCPLCKFNI 359
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 172/350 (49%), Gaps = 42/350 (12%)
Query: 78 SSSNRLNNRSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNE 134
+S RL S ++R + R+ S + ++++ + + A+ VL LSRNE
Sbjct: 53 ASGRRLMREPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAATVLVLSRNE 112
Query: 135 NPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTA 194
NP PL WIVGYA V + + +R R LR S+ A
Sbjct: 113 NPNMPLRLWIVGYALQSVLHVACVCVEYRRR----------LRH--------REHSNAAA 154
Query: 195 ISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFG 254
+S + + D S+ + G+G ++F + H + A F +W+VVG W+
Sbjct: 155 VSGDGSGD----LSSPSMDGSGHY-VSFDDDGISMAKHLESANTMFSFIWWVVGFYWVSA 209
Query: 255 -GHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFILCATICCCLPCIISVLGIREDY 307
+ D+P LY LCI FL F CI A+ I+ +CCCLPCII++L D
Sbjct: 210 DSEALVQDSPLLYWLCIAFLGFDVFFVVFCI--ALACIIGIAVCCCLPCIIALLYAVAD- 266
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLA---AGTEKERMISGEDAV 364
GA+ E I L +KF+ + N N+ G GG++ A + E ++S EDA
Sbjct: 267 --QEGASKEDIEQLSKFKFQ-RTETNEKHAGNTQGAAGGIMIECDADSPIEHVLSDEDAE 323
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
CCICL+ Y D ELR+L CSH FH CVDKWL INA+CPLCK I S+S
Sbjct: 324 CCICLSAYDDGVELRKLPCSHHFHCACVDKWLHINATCPLCKYNILKSTS 373
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 190/377 (50%), Gaps = 54/377 (14%)
Query: 36 ITTTDDASSSSSYDEQPHRMAS----PQHEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMM 91
+ + SSS+ + + R+ S PQH PS S + S S L R F
Sbjct: 7 LNSNSIVQSSSNSETREERVVSSRNRPQHASSPSFSVRMAMRISRSRWFTLL--RRVFHY 64
Query: 92 RGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGC 151
+ +P NS W+ +E I + QII S L +S+ E P P+ WI GY GC
Sbjct: 65 QNGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYDIGC 124
Query: 152 VATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTET 211
V L +Y R+R + L QG +L SD E R++
Sbjct: 125 VLNLLTVYGRYRQIY---------LIQGDAL----------------SLSDIEQQRNS-- 157
Query: 212 ETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCI 270
G+ ++ R++ L++ + +L+ FFA+WFV+GNVW+F S APKL+ LCI
Sbjct: 158 ----GETSVY---RMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCI 210
Query: 271 VFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFKSK 329
LT++ I Y+ PF+L +CCC+P I ++LG + S +GA+ E I+ LP+++ K
Sbjct: 211 TLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWRHKEP 270
Query: 330 KNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHV 389
L ++S E + ED CCICLAKY D +E+R+L CSHVFH+
Sbjct: 271 HATKLELGNDSESIEKFI------------NEDPECCICLAKYKDKEEVRQLPCSHVFHL 318
Query: 390 DCVDKWLKINASCPLCK 406
+CVD+WLKI + CPLCK
Sbjct: 319 ECVDQWLKIISCCPLCK 335
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 158/313 (50%), Gaps = 36/313 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ ++ + +VVL LS E PQ PL WI+GY+ C+ + + + ++ R G
Sbjct: 84 IFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYSLQCLFHIGCVIFEYKRRLFG- 142
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S +L S T++S + D ++ E +G +
Sbjct: 143 --TSARLEASDS-----------TSVSESDGGDSVDD-GVEQRGNDGDTCV--------- 179
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPF 284
V + A F +W++VG W+ GG + +D+P+LY LCI FL F I A+
Sbjct: 180 VKQLESANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVAC 239
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
++ ICCCLPCII +L D GAT E I LP YKF+ + + D T
Sbjct: 240 LIGLAICCCLPCIIGILYAMTD---REGATQEEIEQLPMYKFRRIGDFEKVNADFQA-TF 295
Query: 345 GGVLAA---GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
GG++ T ER +S EDA CCICL+ Y D ELR+L C H FH C+DKWL INA+
Sbjct: 296 GGMMTECEIDTPTERRLSHEDAECCICLSAYEDGTELRQLPCQHHFHSTCIDKWLYINAT 355
Query: 402 CPLCKSEIGDSSS 414
CPLCK I +S+
Sbjct: 356 CPLCKLNILKASN 368
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ + VL+LSR E+P PL WIVGYA CV + + +R
Sbjct: 85 VALDLLWNLAFILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYR------ 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
+R+G S +P ++A++ + + + S+ E + G +
Sbjct: 139 ------MRRGQSGESP---------MAADEETGTDGSSSSSDEDAGERAPRGRNGDYVRI 183
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
H + A F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 184 AKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALAC 243
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF+ + +G +
Sbjct: 244 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSSG 300
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+C
Sbjct: 301 GIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATC 360
Query: 403 PLCKSEIGDSSS 414
PLCK + +SS
Sbjct: 361 PLCKFNVRKNSS 372
>gi|414885025|tpg|DAA61039.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 19/242 (7%)
Query: 32 HIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTST-GVPSYHSSSSSSNRLNNRS-SF 89
H+I + + AS+S+S+ + P ED STST + S S S S + R+ SF
Sbjct: 11 HVISVAHGETASTSTSHQDMCSDSDEPHQEDRLSTSTQTLSSESSPSISPTAYSTRNLSF 70
Query: 90 MMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYAS 149
R YG R SP NSGLWIS E+++ ++Q++A+IV+L SR+E+P APLFAWI+GY
Sbjct: 71 PRRDSIYGHGR-SPWNSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTL 129
Query: 150 GCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRST 209
GC+A+LP++YWR+ +R++ +D + P +P ++Y ++ +Q+S+ N+R++
Sbjct: 130 GCIASLPLIYWRYVHRNRHLDQE------------PQQPPTTYPTLTPSQSSEGRNHRTS 177
Query: 210 ETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPS---DAPKLY 266
G +++ RL+ L HFK +DCFFAVWFVVGNVWIFGG S S DAP +Y
Sbjct: 178 GIVLHLGCISIS-CPRLSVLAYHFKTGVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNMY 236
Query: 267 RL 268
R
Sbjct: 237 RF 238
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 157/312 (50%), Gaps = 31/312 (9%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++ + ++ I+ S VVL LS +E+P PL WI GY + CV + + + R+ +
Sbjct: 81 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYCLRYGQL 140
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
GS +P E S + S++ E + S G +
Sbjct: 141 G--------GSPIPVDEESGSGSASSSSSDDDREHGSHSRS-------------GDCLSI 179
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPF 284
H + A F VW+++G W+ GG DAP+LY LCI+FL F A+
Sbjct: 180 AKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIIFLAFDVFFVVFCVALAC 239
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF+ + G +
Sbjct: 240 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG 296
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+C
Sbjct: 297 GIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATC 356
Query: 403 PLCKSEIGDSSS 414
PLCK + +SS
Sbjct: 357 PLCKYNVRKNSS 368
>gi|388514763|gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 103/128 (80%), Gaps = 3/128 (2%)
Query: 296 CIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKE 355
C++SVLGIRE ++T GAT+ETINALPTYKFK KK D+ NS +EGG++A GTEKE
Sbjct: 17 CLVSVLGIREVLTETHGATSETINALPTYKFKMKKKKT-TDESNSTVSEGGIVAKGTEKE 75
Query: 356 RMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
RM+S EDAVCCICLA Y ++DELREL CSH FH DCVDKWLKINASCPLCKSEIG++ +
Sbjct: 76 RMVSKEDAVCCICLATYENNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEIGENVTG 135
Query: 416 LVQDSAQH 423
V S +H
Sbjct: 136 TV--SGEH 141
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 154/292 (52%), Gaps = 21/292 (7%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
SR+ENP P+ W+VGYA C+ + + + +R RH S++ Q R S + +
Sbjct: 113 SRHENPNMPVRVWVVGYALQCLLHMICVCFEYRRRH----SNAQQQRSNSGGQSGHTNNN 168
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNV 250
+ +A + +E++ +T+ E + + A F +W++VG
Sbjct: 169 NNSANQQSPGEQQESDDATDEEVDE-----VLSTERTSIAKRLESANTMFSFIWWIVGFY 223
Query: 251 WI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIRE 305
WI GG DAP+LY LC+VFL F A+ ++ +CCCLPCII++L
Sbjct: 224 WISAGGQILTHDAPQLYWLCVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVA 283
Query: 306 DYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK---ERMISGED 362
D GA+ E I LP YKFKS G+ G GG++ T + ER++S ED
Sbjct: 284 D---QEGASEEDIGLLPKYKFKSI-GGSEKISGEKSGPFGGIMNLCTGESSTERVLSAED 339
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
A CCICL+ Y D ELREL CSH FH C+DKWL+INA+CPLCK I SS+
Sbjct: 340 AECCICLSTYDDGVELRELPCSHHFHCTCIDKWLRINATCPLCKYNIIKSSN 391
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 187/378 (49%), Gaps = 59/378 (15%)
Query: 36 ITTTDDASSSSSYDEQPHRMAS----PQHEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMM 91
+ + SSS+ + + R+ S PQH PS S + S S L R F
Sbjct: 7 LNSNSIVQSSSNSETREERVVSSRNRPQHASSPSFSVRMAMRISRSRWFTLL--RRVFHY 64
Query: 92 RGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGC 151
+ +P NS W+ +E I + QII S L +S+ E P P+ WI GY GC
Sbjct: 65 QNGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYDIGC 124
Query: 152 VATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNR-STE 210
V L +Y R+R + L QG +L SD E R S E
Sbjct: 125 VLNLLTVYGRYRQIY---------LIQGDAL----------------SLSDIEQQRNSGE 159
Query: 211 TETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLC 269
T R++ L++ + +L+ FFA+WFV+GNVW+F S APKL+ LC
Sbjct: 160 T-------------RMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLC 206
Query: 270 IVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFKS 328
I LT++ I Y+ PF+L +CCC+P I ++LG + S +GA+ E I+ LP+++ K
Sbjct: 207 ITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWRHKE 266
Query: 329 KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFH 388
L ++S E + ED CCICLAKY D +E+R+L CSHVFH
Sbjct: 267 PHATKLELGNDSESIEKFI------------NEDPECCICLAKYKDKEEVRQLPCSHVFH 314
Query: 389 VDCVDKWLKINASCPLCK 406
++CVD+WLKI + CPLCK
Sbjct: 315 LECVDQWLKIISCCPLCK 332
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 164/310 (52%), Gaps = 52/310 (16%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+ +E I + QI + L +S+ E P P+ WIVGY GC+ +L ++Y R
Sbjct: 62 NPFNSSTWMMLEFIALLVQISMTTFTLVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYGR 121
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
+R H + QG S SD E R +E
Sbjct: 122 YRQVH---------VVQGDSFGL----------------SDLEQQRGSE----------- 145
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
R L++ + +L+ FFA+WFV+GNVW+F S + APKL+ LCI L ++ + Y
Sbjct: 146 -DSRCTHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFNRAPKLHVLCISLLAWNALSY 204
Query: 281 AMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFKSKKNGNLNDQDN 339
+ PF+L +CCC+P I SVLG S RGA+ + I+ LP++K+K+ +
Sbjct: 205 SFPFLLFLLLCCCVPLISSVLGYNMQMGSAERGASDDQISRLPSWKYKAVDTNS------ 258
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
+A+ + ++ +D CCICLAKY D +E+R+L CSH+FH+ CVD+WL+I
Sbjct: 259 -------EVASNIDCTSTLANDDPECCICLAKYKDKEEVRQLPCSHMFHLKCVDQWLRII 311
Query: 400 ASCPLCKSEI 409
+ CPLCK E+
Sbjct: 312 SCCPLCKQEL 321
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 165/317 (52%), Gaps = 39/317 (12%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ +S I + VVL LSRNEN PL W+ GYA C+ + + +R R
Sbjct: 83 VALDLLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQ- 141
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R G +P E S ++ S+++ + E R +T+ + L
Sbjct: 142 -------RGGGPVPADEERGSDVSSSSSDEDASENQLRGRDTDYVS-------------L 181
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 182 AKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALAC 241
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF+ ++D++G TE
Sbjct: 242 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPKYKFRRVDE---PEKDSAGATE 295
Query: 345 --GGVLA-AGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
GG++ GT + E+ ++ EDA CCIC++ Y D ELREL C H FH C+DKWL IN
Sbjct: 296 SSGGIMTECGTNQPIEKALAAEDAECCICISAYDDGAELRELPCGHHFHCACIDKWLHIN 355
Query: 400 ASCPLCKSEI--GDSSS 414
A+CPLCK I G SSS
Sbjct: 356 ATCPLCKFSIRKGGSSS 372
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 160/316 (50%), Gaps = 39/316 (12%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ S VVL S +ENP PL WI GYA CV + + +R RH+
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYRFRHRQ- 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF-GGRLNG 228
R G S+ A+DEE + + + ++ GR+
Sbjct: 139 -------RGGPSM-----------------AADEERGTDGSSSSTDEDAGVSIPHGRIGN 174
Query: 229 LV---DHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF 284
V H + F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 175 YVRIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCV 234
Query: 285 ----ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNS 340
I+ +CCCLPCII++L S GA+ + I +P YKF++ N +
Sbjct: 235 ALACIIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRTMDETEKNSVSLT 291
Query: 341 GGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
G + G ++ GT + E++++ EDA CCICL+ Y D +LREL C H FH C+DKWL I
Sbjct: 292 GSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHI 351
Query: 399 NASCPLCKSEIGDSSS 414
NA+CPLCK + +SS
Sbjct: 352 NATCPLCKLNVRKNSS 367
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 159/310 (51%), Gaps = 54/310 (17%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+ ELI + Q+ L++S+ E P P+ WI GY GC+ L +LY R
Sbjct: 84 NPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGR 143
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
+R + QG+ D E + ET
Sbjct: 144 YRQ---------LDVYQGNGFVL----------------GDVEQQQRGREET-------- 170
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
R + L++ + +L+ FFA+WFV+GNVW+F S APKL+ LC+ L+++ I Y
Sbjct: 171 ---RSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLSWNAICY 227
Query: 281 AMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFKSKKNGNLNDQDN 339
+ PF+L +CC +P I S+LG + S R A+ + I++LP++KFK + + N +D D+
Sbjct: 228 SFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFK-RIDENASDSDS 286
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
T + +D CCICLAKY D +E+R+L C H FH CVD+WL+I
Sbjct: 287 DSAT---------------ATDDPECCICLAKYKDKEEVRKLPCQHKFHSKCVDQWLRII 331
Query: 400 ASCPLCKSEI 409
+ CPLCK ++
Sbjct: 332 SCCPLCKQDL 341
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 156/310 (50%), Gaps = 34/310 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I + VVL LSR+E+ PL W+ GYA CV + + +R RH
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRHG-- 142
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGR---L 226
++GS++ A A E + ++ + + L+ GR
Sbjct: 143 -------QRGSAVA------------GAAPADVERGSDASSSSSDEDDRELDLHGRRTDY 183
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF- 284
+ H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 184 ASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVA 243
Query: 285 ---ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
I+ +CCCLPCII++L D GA+ + I +P YKF+ D D G
Sbjct: 244 LACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQDVDPMG 300
Query: 342 GTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL IN
Sbjct: 301 PFGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHIN 360
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 361 ATCPLCKYNI 370
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 159/314 (50%), Gaps = 33/314 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ +S I + VVL LSRNEN PL W+ GYA C+ + + +R R
Sbjct: 83 VALDLLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQ- 141
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R G +P E S ++ S+++ + E R +T+ + L
Sbjct: 142 -------RGGGPVPADEERGSDVSSSSSDEDASENQLRGRDTDYVS-------------L 181
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 182 AKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALAC 241
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF+ + D + +
Sbjct: 242 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPKYKFRRVDEPEKDSADATESSG 298
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G + GT + E+ ++ EDA CCIC++ Y D ELREL C H FH C+DKWL INA+C
Sbjct: 299 GIMTECGTNQPIEKALAAEDAECCICISAYDDGAELRELPCGHHFHCACIDKWLHINATC 358
Query: 403 PLCKSEI--GDSSS 414
PLCK I G SSS
Sbjct: 359 PLCKFSIRKGGSSS 372
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 165/353 (46%), Gaps = 41/353 (11%)
Query: 78 SSSNRLNNRSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNE 134
+SS R+ S +R + R+ S + ++++ ++ ++ ++ VL +SR+E
Sbjct: 48 ASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDE 107
Query: 135 NPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTA 194
P PL WI+GY CV + + ++ R + + S + + G + S
Sbjct: 108 TPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEG 167
Query: 195 ISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-F 253
+ + N ET H + A F +W+++G W+
Sbjct: 168 DPIDYRVEVRNRDEDETSVAK----------------HLESANTMFSFIWWIIGFYWVSA 211
Query: 254 GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA----TICCCLPCIISVLGIREDYSQ 309
GG D+P+LY LCIVFL F + + +CCCLPCII++L D
Sbjct: 212 GGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVAD--- 268
Query: 310 TRGATAETINALPTYKFK-----SKKNGNLNDQDNSGGTEGGVLA---AGTEKERMISGE 361
GAT E I LP YKF+ K NG + + + GG++ T E +I E
Sbjct: 269 QEGATKEEIERLPKYKFRRIGESEKLNGEIQE------SFGGIMTECDTDTPMEHVIPQE 322
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
DA CCICL+ Y D+ ELREL C H FH C+DKWL INA+CPLCK I ++S
Sbjct: 323 DAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKNAS 375
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 155/311 (49%), Gaps = 36/311 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++L+ ++ +I S VL LS +E P PL WI+GYA C+ H
Sbjct: 89 ILLDLLWNLAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQCII------------HMSC 136
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTA-ISANQASDEENNRSTETETGNGQNALNFGGRLNG 228
+ + R+ + PT + S +T+ +N S + + +T N + N
Sbjct: 137 VAVEYKRRRSTREPTGLDRNSDWTSGEDSNSVSGSDGDDYATEQTVNEDESSN------- 189
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSC----IGYAMP 283
LV H + A F +W+++G W+ GG +P+LY L I FL F I A+
Sbjct: 190 LVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVVFVLICVAIA 249
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFK-----SKKNGNLNDQD 338
++ ICCCLPCII++L D GAT E I LP Y F K NG++ Q+
Sbjct: 250 CLVGVAICCCLPCIIAILYAVTD---QEGATKEEIERLPKYTFNRTGDVEKVNGDI--QE 304
Query: 339 NSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
+SGG ER + ED+ CCICL+ Y + ELREL C+H FH +C+DKWL +
Sbjct: 305 SSGGIMSNC-DTDAPTERFLRPEDSECCICLSAYENGAELRELPCNHHFHCNCIDKWLHM 363
Query: 399 NASCPLCKSEI 409
NA+CPLCK I
Sbjct: 364 NATCPLCKFNI 374
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 156/310 (50%), Gaps = 34/310 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I + VVL LSR+E+ PL W+ GYA CV + + +R RH
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRHG-- 142
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGR---L 226
++GS++ A A E + ++ + + L+ GR
Sbjct: 143 -------QRGSAVA------------GAAPADVERGSDASSSSSDEDDRELDLHGRRTDY 183
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF- 284
+ H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 184 ASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVA 243
Query: 285 ---ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
I+ +CCCLPCII++L D GA+ + I +P YKF+ D D G
Sbjct: 244 LACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQDVDPMG 300
Query: 342 GTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL IN
Sbjct: 301 PFGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHIN 360
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 361 ATCPLCKYNI 370
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 172/327 (52%), Gaps = 56/327 (17%)
Query: 88 SFMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
+F+ R Y RS P NS W+ +E + V QI ++ L++S+ E P P+
Sbjct: 58 TFLRRVFHYQNGSRSNLGSNPFNSSPWMMLEFVALVIQISITMFTLAISKAEKPVWPVRI 117
Query: 143 WIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASD 202
WI+GY GCV +L +LY R+R ++TQ G LP D
Sbjct: 118 WIIGYNIGCVLSLLLLYGRYR------QINTTQA-DGFGLP------------------D 152
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSD 261
E R +E + R + L+ + +L+ FFA+WFV+GNVW+F S
Sbjct: 153 LEQQRGSEESSV---------CRCSILMHKCRTSLELFFAIWFVMGNVWVFDSRFGSYHR 203
Query: 262 APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINA 320
APKL+ LCI L ++ + Y+ PF+L +CCC+P I +VLG + S RGA+ + I++
Sbjct: 204 APKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVLGYNMNMGSAERGASDDQISS 263
Query: 321 LPTYKFKSK-KNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELR 379
LP++++K+ N + + T I+ ED CCICLAKY D +E+R
Sbjct: 264 LPSWRYKAADTNSEFRNNADCNST--------------IASEDLECCICLAKYKDKEEVR 309
Query: 380 ELICSHVFHVDCVDKWLKINASCPLCK 406
+L CSH+FH+ CVD+WL+I + CPLCK
Sbjct: 310 KLPCSHMFHLKCVDQWLRIISCCPLCK 336
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 161/328 (49%), Gaps = 63/328 (19%)
Query: 89 FMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAW 143
F+ R Y RS P NS W+ ELI + QI L+LS+NE P P+ W
Sbjct: 191 FLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLW 250
Query: 144 IVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDE 203
I GY GC+ L +LY R+R + T E S+ I Q S E
Sbjct: 251 ITGYNVGCLLNLMLLYGRYRQQD-----------------TSHENAFSFGDIEQQQRSRE 293
Query: 204 ENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDA 262
E R + L++ + +L+ FFA+WFV+GNVW+F S A
Sbjct: 294 ETTRCSH------------------LMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 335
Query: 263 PKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINAL 321
P L+ LCI L ++ + Y+ PF+L +CC +P + S LG + S +GA+ + I++L
Sbjct: 336 PILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSL 395
Query: 322 PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL 381
P++K+K + + Q N+ D CCICLAKY + +E+R+L
Sbjct: 396 PSWKYKLIDETSDSSQANN---------------------DPECCICLAKYKEKEEVRKL 434
Query: 382 ICSHVFHVDCVDKWLKINASCPLCKSEI 409
CSH FH+ CVD+WL+I + CPLCK ++
Sbjct: 435 PCSHRFHLKCVDQWLRIISCCPLCKQDL 462
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 33/323 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ + VL+LSR E+P PL WIVGYA CV + + +R
Sbjct: 85 VALDLLWNLAFILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYR------ 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEE-NNRSTETETGNGQNAL-------- 220
+R+G S +P ++ +SDE+ R+ G+ ++
Sbjct: 139 ------MRRGQSGESPMAADEETGTDGSSSSSDEDAGERAPRGRNGDYVRSVGHHIFYPD 192
Query: 221 NFGGRLNG--LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSC 277
NF + + H + A F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 193 NFSVHKSACSIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDV 252
Query: 278 IGYAMPF----ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGN 333
I+ +CCCLPCII++L D GA+ + I +P YKF+
Sbjct: 253 FFVVFCVALACIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRMDEPE 309
Query: 334 LNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDC 391
+ +G + G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C
Sbjct: 310 KQSVNMTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVC 369
Query: 392 VDKWLKINASCPLCKSEIGDSSS 414
+DKWL INA+CPLCK + +SS
Sbjct: 370 IDKWLHINATCPLCKFNVRKNSS 392
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 156/311 (50%), Gaps = 65/311 (20%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+++EL V V+Q++ + VV+ S E P PL W+ Y G V +LP+L+WR
Sbjct: 74 NPFNSPGWLALELGVIVAQMLITTVVVVSSPKERPAWPLRLWVAAYNVGNVLSLPLLFWR 133
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
R+ D ++ + ASD N S
Sbjct: 134 HRHSSAAGRGDDPEM---------------------HGASDALRNSSY------------ 160
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
L++ + L+ FFA+WFV+GNVW+F S AP+LY LCI L+++ I Y
Sbjct: 161 -------LMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLSWNAIVY 213
Query: 281 AMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDN 339
++PF+L +CC +P + LG + + RGA+ E + ALP ++FK + D
Sbjct: 214 SLPFLLFLLLCCFVPVVGYALGYNMNSASIGRGASDEQLAALPRWRFKEPDVPRDREHD- 272
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
D CCICLA+Y + +E+R+L C+H+FH+ CVD+WL+I
Sbjct: 273 ----------------------DQECCICLAQYREKEEMRQLPCTHMFHLKCVDRWLRII 310
Query: 400 ASCPLCKSEIG 410
+SCPLCK E+G
Sbjct: 311 SSCPLCKQELG 321
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 161/328 (49%), Gaps = 63/328 (19%)
Query: 89 FMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAW 143
F+ R Y RS P NS W+ ELI + QI L+LS+NE P P+ W
Sbjct: 62 FLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLW 121
Query: 144 IVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDE 203
I GY GC+ L +LY R+R + T E S+ I Q S E
Sbjct: 122 ITGYNVGCLLNLMLLYGRYRQQD-----------------TSHENAFSFGDIEQQQRSRE 164
Query: 204 ENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDA 262
E R + L++ + +L+ FFA+WFV+GNVW+F S A
Sbjct: 165 ETTRCSH------------------LMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 206
Query: 263 PKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINAL 321
P L+ LCI L ++ + Y+ PF+L +CC +P + S LG + S +GA+ + I++L
Sbjct: 207 PILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSL 266
Query: 322 PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL 381
P++K+K + + Q N+ D CCICLAKY + +E+R+L
Sbjct: 267 PSWKYKLIDETSDSSQANN---------------------DPECCICLAKYKEKEEVRKL 305
Query: 382 ICSHVFHVDCVDKWLKINASCPLCKSEI 409
CSH FH+ CVD+WL+I + CPLCK ++
Sbjct: 306 PCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 165/320 (51%), Gaps = 48/320 (15%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ + VVL LS +E+P PL WI GYA CV + + +R RH
Sbjct: 80 VALDLLWNLAFILTTAVVLVLSGDESPSVPLRIWIAGYAVQCVVHMVCVAIEYRVRHGQ- 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFG-----G 224
R GSS+ A+DEE R T+ + + +A G G
Sbjct: 139 -------RGGSSM-----------------AADEE--RGTDGSSSSIDDAGESGPHGRIG 172
Query: 225 RLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMP 283
+ H + A F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 173 YFASVAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFC 232
Query: 284 F----ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFK---SKKNGNLND 336
I+ +CCCLPCII++L S GA+ + I +P YKF+ + ++
Sbjct: 233 VALACIIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPKYKFRRVDEPEKQSVTM 289
Query: 337 QDNSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDK 394
++SGG ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DK
Sbjct: 290 IESSGGI---MIECGTNQPIEKVLAAEDAECCICLSVYDDGAELRELPCGHHFHCACIDK 346
Query: 395 WLKINASCPLCKSEIGDSSS 414
WL INA+CPLCK + +SS
Sbjct: 347 WLHINATCPLCKLNVRKNSS 366
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 153/318 (48%), Gaps = 38/318 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ ++ ++ ++ VL +SR+E P PL WI+GY CV + + ++ R + +
Sbjct: 30 VILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLV 89
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S + + G + S + + N ET
Sbjct: 90 SSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDETSVAK-------------- 135
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
H + A F +W+++G W+ GG D+P+LY LCIVFL F + +
Sbjct: 136 --HLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVAC 193
Query: 289 ----TICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFK-----SKKNGNLNDQDN 339
+CCCLPCII++L D GAT E I LP YKF+ K NG + +
Sbjct: 194 VIGIAVCCCLPCIIAILYTVAD---QEGATKEEIERLPKYKFRRIGESEKLNGEIQE--- 247
Query: 340 SGGTEGGVLA---AGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL 396
+ GG++ T E +I EDA CCICL+ Y D+ ELREL C H FH C+DKWL
Sbjct: 248 ---SFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWL 304
Query: 397 KINASCPLCKSEIGDSSS 414
INA+CPLCK I ++S
Sbjct: 305 YINATCPLCKLNILKNAS 322
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 150/293 (51%), Gaps = 37/293 (12%)
Query: 127 VLSLSRNENPQAPLFAWIVGYA-SGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTP 185
VL+LS +E+P PL AWIVGY G + +L + + + + R+ S P
Sbjct: 100 VLALSTDEDPCVPLRAWIVGYLLQGALHSLCV-----------VAEFTRRRRRRVSGTHP 148
Query: 186 PEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWF 245
+ S + SDEE + G+G N + H + +W+
Sbjct: 149 GSNVVGHVQWSFSSESDEEFYPPEQFLEGDG----------NSITKHIETVNTMLSFIWW 198
Query: 246 VVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSC----IGYAMPFILCATICCCLPCIISV 300
+VG W+ GG S D+P+LY LCI FL F I ++ ++ +CCCLPCI+++
Sbjct: 199 IVGFYWVTAGGQSLTRDSPQLYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAI 258
Query: 301 LGIREDYSQTRGATAETINALPTYKFK----SKKNGNLNDQDNSGGTEGGVLAAGTEKER 356
L + D GAT E I+ LP YKF+ KK G++ + TE + T E
Sbjct: 259 LYVVAD---PEGATKEEIDQLPKYKFRIIKEFKKEGDIEESSRGIMTET---ESETAAEH 312
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+I+ EDA CCICL+ Y +D ELREL C+H FH C+DKWL INA+CPLCK I
Sbjct: 313 VIALEDAECCICLSAYDNDAELRELPCNHHFHCTCIDKWLLINATCPLCKFNI 365
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 160/317 (50%), Gaps = 51/317 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPI--LYWRFRNRHQ 167
++++L+ ++ I+ S VVL S +ENP PL WI GYA CV + + +RFR+R +
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYRFRHRQR 139
Query: 168 GIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRST---ETETGNGQNALNFGG 224
G S + +G+ ++ ++DE+ S E+GN
Sbjct: 140 GGPSMAADEERGTD--------------GSSSSTDEDAGVSIPHGRLESGNTM------- 178
Query: 225 RLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMP 283
F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 179 ---------------FSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFC 223
Query: 284 F----ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDN 339
I+ +CCCLPCII++L S GA+ + I +P YKF++ N
Sbjct: 224 VALACIIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRTMDETEKNSVSL 280
Query: 340 SGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK 397
+G + G ++ GT + E++++ EDA CCICL+ Y D +LREL C H FH C+DKWL
Sbjct: 281 TGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLH 340
Query: 398 INASCPLCKSEIGDSSS 414
INA+CPLCK + +SS
Sbjct: 341 INATCPLCKLNVRKNSS 357
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 161/318 (50%), Gaps = 43/318 (13%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ + VVL LS +E+P PL WI GYA CV + + +R RH
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQ- 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGN---GQNALNFGGRL 226
R G S+ A+DEE + + + G+N + GR+
Sbjct: 139 -------RGGPSM-----------------AADEERGSDGSSSSTDEDAGENVTH--GRI 172
Query: 227 NGLV---DHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM 282
V H + F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 173 GDCVSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVF 232
Query: 283 ----PFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD 338
I+ +CCCLPCII++L S GA+ + I +P YKF+
Sbjct: 233 CVALACIIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRRINEPEKQSVS 289
Query: 339 NSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL 396
+G + G ++ GT + E++++ EDA CCICL+ Y D ELREL C+H FH C+DKWL
Sbjct: 290 MTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWL 349
Query: 397 KINASCPLCKSEIGDSSS 414
INA+CPLCK + +SS
Sbjct: 350 HINATCPLCKLNVRKNSS 367
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 156/312 (50%), Gaps = 51/312 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ S VVL S +ENP PL WI GYA CV + + +R RH+
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYRFRHRQ- 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R G S+ A+DEE R T+ + +
Sbjct: 139 -------RGGPSM-----------------AADEE--RGTDGSSS--------------I 158
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
H + F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 159 AKHLESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALAC 218
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF++ N +G +
Sbjct: 219 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSG 275
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G ++ GT + E++++ EDA CCICL+ Y D +LREL C H FH C+DKWL INA+C
Sbjct: 276 GIMIECGTNQPIEKVLAAEDAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATC 335
Query: 403 PLCKSEIGDSSS 414
PLCK + +SS
Sbjct: 336 PLCKLNVRKNSS 347
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 158/318 (49%), Gaps = 41/318 (12%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ + ++ + +L LSRNE+P PL WIVGYA C+ + + +R R Q
Sbjct: 88 VILDIVWNFAFVVVAATILVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLR 147
Query: 170 DSDSTQLRQGSSLPT-----PPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGG 224
S + + +G+S + +S Y ++ A +EN+ S
Sbjct: 148 YSAFSSMEEGNSARSISGLGSRANSSHYVSL----AQLDENDSS---------------- 187
Query: 225 RLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFL----TFSCIG 279
+ H + A F +W+++G W+ GG S +P LY LCI+FL F
Sbjct: 188 ----VAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFVVFC 243
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDN 339
A+ I+ +CCCLPCII++L D GAT E + L +KF+ +N D
Sbjct: 244 VALACIIGIAVCCCLPCIIALLYAVAD---QEGATKEDVEQLSKFKFRKVENTEKFSTDV 300
Query: 340 SGGTEGGVLA---AGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL 396
GGV++ + ER + EDA CCICL+ Y D ELREL C H FH CVDKWL
Sbjct: 301 QEPL-GGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCGHHFHCACVDKWL 359
Query: 397 KINASCPLCKSEIGDSSS 414
INA+CPLCK I +S+
Sbjct: 360 YINATCPLCKYNILKNSN 377
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 33/314 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ +I SI +L S +E+P PL WI+GY C+ + + ++ R
Sbjct: 85 IVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRR---- 140
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R +S P E +S++ ++S S++E++ + T + + +F
Sbjct: 141 -------RVANSPPPSGEDSSNHESLSG---SEDESDGYSINNTDDDDHGTSF------- 183
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA-PKLYRLCIVFLTFSC----IGYAMPF 284
H + A F VW+++G W+ + + + P+LY LC+ FL F I A+
Sbjct: 184 TKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 243
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG---NLNDQDNSG 341
++ +CCCLPCII++L D GA E I L +KF + KN N ++ G
Sbjct: 244 LIGIAVCCCLPCIIAILYALAD---QEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQG 300
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G G L ++ ERM+ EDA C ICL Y D ELREL C H FH CVDKWL+INA+
Sbjct: 301 GIMTG-LDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINAT 359
Query: 402 CPLCKSEIGDSSSP 415
CPLCK I + P
Sbjct: 360 CPLCKFNILKNGEP 373
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 155/314 (49%), Gaps = 35/314 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ +I SI +L S E+P PL WI+GY C+ H G
Sbjct: 85 IVLDILWNFVFVIVSIAILGFSSEEDPDVPLRLWIIGYNFQCLL------------HVGC 132
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
+ R+ ++ P E +S++ ++S SD+E++ + +T +
Sbjct: 133 VIAEYKRRREANSPPSGEDSSNHESLSG---SDDESDGYSINDTDDDHG--------TSF 181
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA-PKLYRLCIVFLTFSC----IGYAMPF 284
H + A F VW+++G W+ + + + P+LY LC+ FL F I A+
Sbjct: 182 TKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 241
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG---NLNDQDNSG 341
++ +CCCLPCII++L D GA E I L +KF KN N ++ G
Sbjct: 242 LIGIAVCCCLPCIIAILYALAD---QEGAPDEEIERLLKFKFLVVKNSEKVNGEIRETQG 298
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G G L A ++ ER++S EDA C ICL Y D ELREL C H FH CVDKWL+INA+
Sbjct: 299 GIMTG-LGAESQTERVLSSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINAT 357
Query: 402 CPLCKSEIGDSSSP 415
CPLCK I + P
Sbjct: 358 CPLCKFNILKNGEP 371
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 33/314 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ +I SI +L S +E+P PL WI+GY C+ + + ++ R
Sbjct: 68 IVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRR---- 123
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R +S P E +S++ ++S S++E++ + T + + +F
Sbjct: 124 -------RVANSPPPSGEDSSNHESLSG---SEDESDGYSINNTDDDDHGTSF------- 166
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA-PKLYRLCIVFLTFSC----IGYAMPF 284
H + A F VW+++G W+ + + + P+LY LC+ FL F I A+
Sbjct: 167 TKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 226
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG---NLNDQDNSG 341
++ +CCCLPCII++L D GA E I L +KF + KN N ++ G
Sbjct: 227 LIGIAVCCCLPCIIAILYALAD---QEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQG 283
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G G L ++ ERM+ EDA C ICL Y D ELREL C H FH CVDKWL+INA+
Sbjct: 284 GIMTG-LDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINAT 342
Query: 402 CPLCKSEIGDSSSP 415
CPLCK I + P
Sbjct: 343 CPLCKFNILKNGEP 356
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 31/312 (9%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++ + ++ I+ S VVL LS +E+P PL WI GY + CV + + +R R+ +
Sbjct: 81 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYRLRYGQL 140
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
GS +P E S + S++ E + S G +
Sbjct: 141 G--------GSPIPVDEESGSGSASSSSSDDDREHGSHSR-------------SGDCLSI 179
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
H + A F VW+++G W+ GG DAP+LY LCIVFL F
Sbjct: 180 AKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALAC 239
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L D GA+ + I +P YKF+ + G +
Sbjct: 240 IIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG 296
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+C
Sbjct: 297 GIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATC 356
Query: 403 PLCKSEIGDSSS 414
PLCK + +SS
Sbjct: 357 PLCKYNVRKNSS 368
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 31/312 (9%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++ + ++ I+ S VVL LS +E+P PL WI GY + CV + + +R R+ +
Sbjct: 30 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYRLRYGQL 89
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
GS +P E S + S++ E + S G +
Sbjct: 90 G--------GSPIPVDEESGSGSASSSSSDDDREHGSHSR-------------SGDCLSI 128
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----PF 284
H + A F VW+++G W+ GG DAP+LY LCIVFL F
Sbjct: 129 AKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALAC 188
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L D GA+ + I +P YKF+ + G +
Sbjct: 189 IIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSG 245
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+C
Sbjct: 246 GIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATC 305
Query: 403 PLCKSEIGDSSS 414
PLCK + +SS
Sbjct: 306 PLCKYNVRKNSS 317
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 156/311 (50%), Gaps = 34/311 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++L+ +S ++ S+V+L+ + E P PL WI GYA C+ + + + + R+
Sbjct: 75 VMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVWIAGYALQCLLHMIYVAYEYTRRN--- 131
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNAL--NFGGRLN 227
RQ S S + + Q + + E ETG + + RL
Sbjct: 132 -------RQRSP-SVGSAGGSESASSAGEQVNSQVGRAPQEAETGRQETEERSSIAKRLE 183
Query: 228 GLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYA----M 282
+ F FF W++VG W+ GG S DAP+LY LCIVFL F A +
Sbjct: 184 SVNTMFS-----FF--WWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFVAFCAAV 236
Query: 283 PFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF----KSKKNGNLNDQD 338
++ +CCCLPCII++L + GA+ IN LP Y+F S+KN + ++
Sbjct: 237 ACMIGIAVCCCLPCIIAIL---YAVANQDGASETEINLLPKYRFCRIGPSEKNNS--EKS 291
Query: 339 NSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
S G ++ + ER++ EDA CCICL+ Y D EL EL C+H FH C+ KWL+I
Sbjct: 292 PSYGGVMTLICGESTSERVLGAEDAECCICLSAYEDGVELYELPCNHHFHCGCIAKWLRI 351
Query: 399 NASCPLCKSEI 409
NA+CPLCK +
Sbjct: 352 NATCPLCKYNV 362
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 143/296 (48%), Gaps = 38/296 (12%)
Query: 130 LSRNENPQAPLFAWIVGYASGCV---ATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPP 186
LSRNENP PL WIVGYA CV A + + Y R R + ++ + L PP
Sbjct: 106 LSRNENPNMPLRLWIVGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDL-GPP 164
Query: 187 EPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFV 246
S +S Q D+ + + E+ N F +W+V
Sbjct: 165 SMDGSGHYVSLAQFDDDGISMAKHLESANTM----------------------FSFIWWV 202
Query: 247 VGNVWIFG-GHSSPSDAPKLYRLCIVFLTFSCI----GYAMPFILCATICCCLPCIISVL 301
VG W+ S D+P LY LCI FL F A+ I+ +CCCLPCII++L
Sbjct: 203 VGFYWVSADSESLVRDSPLLYWLCIAFLGFDVFFVVFCMALACIVGIAVCCCLPCIIALL 262
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLA---AGTEKERMI 358
D GA+ E I L +KF+ + N N+ G GG++ A + E ++
Sbjct: 263 YAVAD---QEGASKEDIEQLSKFKFQ-RTETNEKLAGNTQGAAGGIMIECDADSPIEHVL 318
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
S EDA CCICL+ Y D ELR+L C H FH CVDKWL INA+CPLCK I S+S
Sbjct: 319 SDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLHINATCPLCKYNILKSTS 374
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 33/309 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ ++ + +I +L S +ENP PL WI+GY C+ + + +R RH+
Sbjct: 85 IVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWIIGYNLQCLFHVGCVIAEYRRRHR-- 142
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
RQ P S ++ +++ ++ +++ G L
Sbjct: 143 -------RQSDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDSQIEPG----------TSL 185
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA-PKLYRLCIVFLTFSCIGY----AMPF 284
H + A F VW+++G W+ S + P+LY LC+ FL F I A+
Sbjct: 186 AKHLESANAIFSFVWWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFVVLCVAVAC 245
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG-NLNDQDNSGGT 343
++ +CCCLPCII+VL D GA+ E I LP +KF + +N +N + T
Sbjct: 246 LIGIAVCCCLPCIIAVLYALADRG---GASDEEIERLPKFKFLTVRNSEKVNGEIRE--T 300
Query: 344 EGGV---LAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
GG+ L + ER++S ++A CCICL Y D ELRE+ C H FH C+DKWL+INA
Sbjct: 301 HGGIMTQLGVDSPTERVLSSDEAECCICLCDYEDGTELREMSCRHHFHEACIDKWLRINA 360
Query: 401 SCPLCKSEI 409
+CPLCK I
Sbjct: 361 TCPLCKFNI 369
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 161/310 (51%), Gaps = 65/310 (20%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+++EL V V+Q++ + V++ S E P PL W+ Y G V +LP+LYWR
Sbjct: 473 NPFNSPGWLALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWR 532
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
HQ +++A + D E + G G +AL
Sbjct: 533 ----HQ-------------------------HSLAARRGDDPEMH-------GAG-DALR 555
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
+ L++ + L+ FFA+WFV+GNVW+F S AP+LY LCI L ++ + Y
Sbjct: 556 DS---SYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVY 612
Query: 281 AMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDN 339
++PF+L +CC +P + LG + + RGA+ E ++ALP ++FK ++D
Sbjct: 613 SLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALPRWRFKEPDVPRDREKD- 671
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
D CCICLA+Y + +E+R+L C+H+FH+ CVD+WL+I
Sbjct: 672 ----------------------DQECCICLAQYREKEEVRQLPCTHMFHLKCVDRWLRII 709
Query: 400 ASCPLCKSEI 409
+SCPLCK E+
Sbjct: 710 SSCPLCKQEL 719
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 156/315 (49%), Gaps = 36/315 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I + VVL LSR+E+ PL W+ GYA CV + + +R RH
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRHG-- 142
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGR---L 226
++G + P A +E + + + + L+ GR
Sbjct: 143 -------QRGGAGAAP--------------ADEERGSDGSSSSSDEDDRELDRHGRRTDY 181
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF- 284
+ H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 182 ASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVA 241
Query: 285 ---ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
I+ +CCCLPCII++L S GA+ + I +P YKF+ D D G
Sbjct: 242 LACIIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRRTDEPEKQDVDPMG 298
Query: 342 GTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G + GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL IN
Sbjct: 299 PFGGIMTECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCTCIDKWLHIN 358
Query: 400 ASCPLCKSEIGDSSS 414
A+CPLCK I S+S
Sbjct: 359 ATCPLCKYNIRKSNS 373
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 156/311 (50%), Gaps = 34/311 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++L+ +S ++ S+V+L+ + E P P+ WI GYA C+ + + + + R+
Sbjct: 75 VMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVWIAGYALQCLLHMIYVAYEYTRRN--- 131
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNAL--NFGGRLN 227
RQ S S + + Q + + E ETG + + RL
Sbjct: 132 -------RQRSP-SVGSAGGSESASSAGEQVNSQVGRAPQEAETGRQETEERSSIAKRLE 183
Query: 228 GLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYA----M 282
+ F FF W++VG W+ GG S DAP+LY LCIVFL F A +
Sbjct: 184 SVNTMFS-----FF--WWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFVAFCAAV 236
Query: 283 PFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF----KSKKNGNLNDQD 338
++ +CCCLPCII++L + GA+ IN LP Y+F S+KN + ++
Sbjct: 237 ACMIGIAVCCCLPCIIAIL---YAVANQDGASETEINLLPKYRFCRIGPSEKNNS--EKS 291
Query: 339 NSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
S G ++ + ER++ EDA CCICL+ Y D EL EL C+H FH C+ KWL+I
Sbjct: 292 PSYGGVMTLICGESTSERVLGAEDAECCICLSAYEDGVELYELPCNHHFHCGCIAKWLRI 351
Query: 399 NASCPLCKSEI 409
NA+CPLCK +
Sbjct: 352 NATCPLCKYNV 362
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 154/312 (49%), Gaps = 51/312 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ + VVL LS +E+P PL WI GYA CV + + +R RH
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQ- 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R G S+ A + SD ++ + E+GN
Sbjct: 139 -------RGGPSM-----------AADEERGSDGSSSIAKHLESGNTM------------ 168
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 169 ----------FSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALAC 218
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF+ +G +
Sbjct: 219 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSG 275
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G ++ GT + E++++ EDA CCICL+ Y D ELREL C+H FH C+DKWL INA+C
Sbjct: 276 GMMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINATC 335
Query: 403 PLCKSEIGDSSS 414
PLCK + +SS
Sbjct: 336 PLCKLNVRKNSS 347
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 166/312 (53%), Gaps = 53/312 (16%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+ +E + + QI + L++S+ ENP P+ WI+GY GCV +L +LY R
Sbjct: 29 NPFNSSSWMMLEFVALLLQICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGR 88
Query: 162 FR--NRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNA 219
+R N QG G LP + Q EE++
Sbjct: 89 YRQLNATQG---------DGFGLPDLEQ-----------QGGSEESSVC----------- 117
Query: 220 LNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCI 278
R + L++ + +L+ FFA+WFV+GNVW+F S APKL+ LCI L ++ +
Sbjct: 118 -----RYSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSYFRAPKLHVLCISLLAWNAL 172
Query: 279 GYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFKSKKNGNLNDQ 337
Y+ PF+L +CCC+P I +V+G S RGA+ + I+ LP+ ++K+ D
Sbjct: 173 SYSFPFLLFLLLCCCVPLISTVIGYNMSMGSAERGASDDQISRLPSRRYKAV------DT 226
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK 397
D+ + + ++ ED CCICLAKY D +E+R+L CSH+FH+ CVD+WL+
Sbjct: 227 DSE-------FRNSVDCDSTVASEDLECCICLAKYKDIEEVRQLPCSHMFHLKCVDQWLR 279
Query: 398 INASCPLCKSEI 409
I + CPLCK E+
Sbjct: 280 IISCCPLCKQEL 291
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 171/354 (48%), Gaps = 69/354 (19%)
Query: 71 PSYHSSSSSSNRLNNRSS------FMMRGDGYGRRRRS-----PLNSGLWISVELIVTVS 119
P SSS RL R S F+ R Y RS P NS W+ ELI +
Sbjct: 38 PESSPSSSFLMRLAMRVSRATWFIFLRRVFHYQNASRSDLGTNPFNSITWMISELIALLV 97
Query: 120 QIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQG 179
QI L+LS+ E P P+ WI GY GC+ L +LY R+R +H QG
Sbjct: 98 QITVITSTLALSKKERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQHTS---------QG 148
Query: 180 SSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDC 239
++ S+ I Q S EE R + L++ + +L+
Sbjct: 149 NAF--------SFGDIELQQRSREETTRCSH------------------LMNRCRTSLEL 182
Query: 240 FFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCII 298
FFA+WFV+GNVW+F S AP L+ LCI L ++ + Y+ PF+L +CC +P +
Sbjct: 183 FFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLLS 242
Query: 299 SVLGIREDY-SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM 357
S LG + S +GA+ + I++LP++K+K L D+ +
Sbjct: 243 SFLGYNMNVGSSEKGASDDQISSLPSWKYK------LIDEASDSAQ-------------- 282
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ D CCICLAKY + +E+R+L CSH FH+ CVD+WL+I + CPLCK + +
Sbjct: 283 -ASNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQNLPN 335
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 159/313 (50%), Gaps = 25/313 (7%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ + +I + L LSRNE P+ PL WI GY CV + + + +R R +
Sbjct: 86 VILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQ 145
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S S+ GS I + S E +RS + + A F +
Sbjct: 146 RSSSSNAVAGSD------------RIGSGNFSSREGSRSAVSGSSYVSLA-QFDEESTSV 192
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPF 284
H + A F +W+++G W+ GG + D+P+LY LCIVFL F A+
Sbjct: 193 AKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDVFFVVFCVALAC 252
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
++ +CCCLPCII++L D GA+ E I L +KF+ K N DN+ G
Sbjct: 253 VIGIAVCCCLPCIIALLYAVAD---QEGASKEDIEQLSKFKFR-KVESNEKQTDNNQGPV 308
Query: 345 GGVLA---AGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
GG++ A + E +++ EDA CCICL+ Y D ELREL C H FH CVDKWL INA+
Sbjct: 309 GGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYINAT 368
Query: 402 CPLCKSEIGDSSS 414
CPLCK I SS+
Sbjct: 369 CPLCKYNILKSSN 381
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 154/315 (48%), Gaps = 51/315 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I+ + VVL LS +E+P PL WI GYA CV + + +R RH
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQ- 138
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R G S+ A + SD ++ + E+GN
Sbjct: 139 -------RGGPSM-----------AADEERGSDGSSSIAKHLESGNTM------------ 168
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 169 ----------FSFIWWIIGFYWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALAC 218
Query: 285 ILCATICCCLPCIISVLGIREDYSQT---RGATAETINALPTYKFKSKKNGNLNDQDNSG 341
I+ +CCCLPCII++L D GA+ + I +P YKF+ +G
Sbjct: 219 IIGIAVCCCLPCIIAILYAVSDQVWLLTYEGASEDDIRQIPRYKFRRINEPEKQSVSMTG 278
Query: 342 GTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
+ G ++ GT + E++++ EDA CCICL+ Y D ELREL C+H FH C+DKWL IN
Sbjct: 279 SSGGMMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHIN 338
Query: 400 ASCPLCKSEIGDSSS 414
A+CPLCK + +SS
Sbjct: 339 ATCPLCKLNVRKNSS 353
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 163/353 (46%), Gaps = 58/353 (16%)
Query: 78 SSSNRLNNRSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNE 134
+SS R+ S +R + R+ S + ++++ ++ ++ ++ VL +SR+E
Sbjct: 48 ASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDE 107
Query: 135 NPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTA 194
P PL WI+GY CV + + ++ R + + S + + G + +++
Sbjct: 108 TPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGNFSC 167
Query: 195 ISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-F 253
A H + A F +W+++G W+
Sbjct: 168 SVAK---------------------------------HLESANTMFSFIWWIIGFYWVSA 194
Query: 254 GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA----TICCCLPCIISVLGIREDYSQ 309
GG D+P+LY LCIVFL F + + +CCCLPCII++L D
Sbjct: 195 GGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVAD--- 251
Query: 310 TRGATAETINALPTYKFK-----SKKNGNLNDQDNSGGTEGGVLA---AGTEKERMISGE 361
GAT E I LP YKF+ K NG + + + GG++ T E +I E
Sbjct: 252 QEGATKEEIERLPKYKFRRIGESEKLNGEIQE------SFGGIMTECDTDTPMEHVIPQE 305
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
DA CCICL+ Y D+ ELREL C H FH C+DKWL INA+CPLCK I ++S
Sbjct: 306 DAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKNAS 358
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 65/310 (20%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+++EL V V+Q++ + V++ S E P PL W+ Y G V +LP+LYWR
Sbjct: 58 NPFNSPGWLALELGVIVAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWR 117
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
HQ +++A + D E + + + +
Sbjct: 118 ----HQ-------------------------HSLAARRGDDPEMHGAGDALRDSSY---- 144
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
L++ + L+ FFA+WFV+GNVW+F S AP+LY LCI L ++ + Y
Sbjct: 145 -------LMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGLLAWNAVVY 197
Query: 281 AMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDN 339
++PF+L +CC +P + LG + + RGA+ E ++ALP ++FK ++D
Sbjct: 198 SLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALPRWRFKEPDVPRDREKD- 256
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
D CCICLA+Y + +E+R+L C+H+FH+ CVD+WL+I
Sbjct: 257 ----------------------DQECCICLAQYREKEEVRQLPCTHMFHLKCVDRWLRII 294
Query: 400 ASCPLCKSEI 409
+SCPLCK E+
Sbjct: 295 SSCPLCKQEL 304
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 185/397 (46%), Gaps = 56/397 (14%)
Query: 28 TDRDHIIDIT--TTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRLNN 85
++ D IID T + + S DE+ ++P H + + S R+
Sbjct: 27 SNSDGIIDTTPFLPPTVTRTISVDEE----SNPIHRSARRQGLREAARFLRHAGSRRMMR 82
Query: 86 RSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
S ++R + R+ S + ++++ ++ + + VL LSR+E P PL
Sbjct: 83 EPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRV 142
Query: 143 WIVGYASGC---VATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQ 199
W+VGY C +A + + Y R R R D + L SS Y +++ +
Sbjct: 143 WVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSS--------QQYVSLAQLE 194
Query: 200 ASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSS 258
E +N + E+ N F +W+++G W+ GG +
Sbjct: 195 DRGETSNPAKHLESANTM----------------------FSFIWWIIGFYWVSAGGQTL 232
Query: 259 PSDAPKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGAT 314
SD+P+LY LCI+FL F A+ ++ +CCCLPCII++L D GA+
Sbjct: 233 SSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVAD---QEGAS 289
Query: 315 AETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKY 372
I+ +P ++F K GN+ + SG G + GT+ ER +S EDA CCICL +Y
Sbjct: 290 KNDIDQMPKFRFT--KTGNV--EKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEY 345
Query: 373 VDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
D ELREL C+H FH C+DKWL IN+ CPLCK I
Sbjct: 346 EDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 48/309 (15%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ ++ + ++ V S E+P+APL WIVGY C+ + + +R R
Sbjct: 82 IVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNR 141
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
D DS +S+ Q S + E E+G N +
Sbjct: 142 DLDS--------------------GLSSVQGSS--DGYGAEIESG------------NSV 167
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFG-GHSSPSDAPKLYRLCIVFLTFSCI----GYAMPF 284
H + F VW+V+G W+ +P+LY LC+ FL F I A+
Sbjct: 168 AKHIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVAC 227
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG-NLNDQDNSGGT 343
++ +CCCLPCII+VL D GA+ E I LP +KF + +N +N + T
Sbjct: 228 LIGIAVCCCLPCIIAVLYALAD---REGASDEEIEKLPKFKFLTVRNSEKVNGEIRE--T 282
Query: 344 EGGV---LAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
GG+ L ER++S ++A CCICL Y D ELREL C H FH C+DKWL+INA
Sbjct: 283 RGGIMTQLGVDFPSERVLSSDEAECCICLCDYEDGTELRELFCRHHFHEACIDKWLRINA 342
Query: 401 SCPLCKSEI 409
+CPLCK I
Sbjct: 343 TCPLCKFNI 351
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 61/310 (19%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+++EL V V+Q++ + V++ S E P PL W+ Y G V +LP+LYWR
Sbjct: 178 NPFNSPGWLALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWR 237
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
R+ + + + + A+D NRS
Sbjct: 238 HRHSSSSSSAGGGR-----------------GDLEMHGANDAPGNRSY------------ 268
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
L++ + L+ FFA+WFV+GNVW+F S AP+LY LC+ L ++ + Y
Sbjct: 269 -------LMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLYALCVSLLAWNAVVY 321
Query: 281 AMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSKKNGNLNDQDN 339
++PF+L +CC +P + LG + + RGA+ E + ALP ++FK ++D
Sbjct: 322 SLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPRWRFKEPDVARDRERD- 380
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
D CCICLA+Y + +E+R+L C+HVFH+ CVD+WL+I
Sbjct: 381 ----------------------DQECCICLAQYGEKEEVRQLPCTHVFHLKCVDRWLRII 418
Query: 400 ASCPLCKSEI 409
+SCPLCK E+
Sbjct: 419 SSCPLCKQEL 428
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 154/310 (49%), Gaps = 54/310 (17%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+ ELI + Q+ L++S+ E P P+ WI GY GC+ L +LY R
Sbjct: 84 NPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGR 143
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
+R + QG+ D E + ET
Sbjct: 144 YRQ---------LDINQGNGFVL----------------GDVEQQQRGREET-------- 170
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
R + L++ + +L+ FFA+WFV+GNVW+F S APKL+ LC+ L ++ I Y
Sbjct: 171 ---RSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICY 227
Query: 281 AMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFKSKKNGNLNDQDN 339
+ PF+L +CC +P I S+LG + S R A+ + I++LP++KFK + + +
Sbjct: 228 SFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSD 287
Query: 340 SGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
S +D CCICLAKY D +E+R+L CSH FH CVD+WL+I
Sbjct: 288 SATVT----------------DDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRII 331
Query: 400 ASCPLCKSEI 409
+ CPLCK ++
Sbjct: 332 SCCPLCKQDL 341
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 152/294 (51%), Gaps = 26/294 (8%)
Query: 131 SRNENPQAPLFAWIVGYASGCV---ATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPE 187
SR E+P PL WIVGYA C+ + + Y R R R S+ + G S + P+
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 188 PTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVV 247
SS AN DE ++++ + F L+ + H + A F +W+++
Sbjct: 169 GDSSQYVTLAN--VDEHHSQTCQ-----------FLSLLSSVAKHLESANTMFSFIWWII 215
Query: 248 GNVWI-FGGHSSPSDAPKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCIISVLG 302
G W+ GG + D+P+LY LCI+FL F A+ ++ +CCCLPCII++L
Sbjct: 216 GFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILY 275
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISG 360
D GA+ E I+ L +KF+ + D D G G + GT+ E ++S
Sbjct: 276 AVAD---QEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQ 332
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
EDA CCICL+ Y D ELREL C H FH CVDKWL INA+CPLCK I SSS
Sbjct: 333 EDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSS 386
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 57/299 (19%)
Query: 88 SFMMRGDGYGRRRRS-----PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
+F+ R Y RS P NS W+ +E I + QI + L++S+ E P P+
Sbjct: 59 TFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALILQITITTFTLAISKRERPIWPMRI 118
Query: 143 WIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASD 202
W+ GY GCV L +LY R+R + L QG SL SD
Sbjct: 119 WVSGYDIGCVLNLLLLYGRYRQIY---------LTQGDSL----------------SLSD 153
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSD 261
E R+ E ET R++ L++ + +L+ FFA+WFV+GNVW+F S
Sbjct: 154 IEQQRNNE-ET-----------RMSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHH 201
Query: 262 APKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINA 320
APKL+ LCI+ L ++ + Y+ PF+L +CCC+P I ++LG + S +GA+ + I+
Sbjct: 202 APKLHVLCIILLAWNAMCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNKGASNDQISQ 261
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELR 379
LP+++ K + E G + G+EK + ED CCICLAKY D++E+R
Sbjct: 262 LPSWRHK----------EAGAKLELGNASEGSEK---LINEDPECCICLAKYKDEEEVR 307
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 156/321 (48%), Gaps = 47/321 (14%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQ-- 167
+ ++++ + + +I VL +SR E+P PL WIVGY CV + + +R R +
Sbjct: 88 VILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGYGLQCVLHMVCVCVEYRRRRRRR 147
Query: 168 -----GIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNF 222
GI SD L GS S ++ Q D + S
Sbjct: 148 RRVGFGIGSDG-NLSSGSR-------GDSGEYVTLAQLEDHDGTSS-------------- 185
Query: 223 GGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFL----TFSC 277
+ H + A F +W+++G W+ GG + ++P+LY LCI+FL F
Sbjct: 186 ------VAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVV 239
Query: 278 IGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG-NLND 336
A+ I+ +CCCLPCII++L D GA+ E I L +KF+ N L
Sbjct: 240 FCVALACIIGIAVCCCLPCIIAILYAVAD---QEGASKEDIEQLSKFKFRRVDNDEKLTG 296
Query: 337 QDNSGGTEGGVLA-AGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVD 393
+ G GGV+ GT+ E ++S EDA CCICL+ Y D ELREL C H FH CVD
Sbjct: 297 NGDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVD 356
Query: 394 KWLKINASCPLCKSEIGDSSS 414
KWL INA+CPLCK I SSS
Sbjct: 357 KWLYINATCPLCKYNILKSSS 377
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 154/308 (50%), Gaps = 32/308 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++LI ++ + S+ VL LS+ E L WI+GYA CV + + + R Q +
Sbjct: 49 VVLDLIWNLAFVQVSLAVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQQV 108
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
+++ + + +S P ++ EN+ + + N ++ RL
Sbjct: 109 NANPSSVSSSNSTYAP--------------INNGENDVDSGFDDDGLSNEASWAKRLESA 154
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPF 284
F VW+VVG WI GG S DAP +Y LC++FLTF A+
Sbjct: 155 NTMFSF-------VWWVVGFYWITAGGQSLAVDAPYVYWLCVLFLTFDVFFVVFCVALAC 207
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKF-KSKKNGNL--NDQDNSG 341
++ +CCCLPCII++L D GA+ E IN LPT KF K +G + N +
Sbjct: 208 VIGIAVCCCLPCIIAILYAVAD---QEGASEEDINNLPTAKFRKISSDGKITANYERALA 264
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G V A+ ER + +DA CCICL+ Y D ELR+L CSH FH C+ KWL+INA+
Sbjct: 265 GVMTFVGASENLTERSLFEDDAECCICLSSYEDGVELRDLPCSHHFHSTCIIKWLRINAT 324
Query: 402 CPLCKSEI 409
CPLCK I
Sbjct: 325 CPLCKFNI 332
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 31/307 (10%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I + VVL LSR E+ PL W+ GYA CV + + +R R
Sbjct: 30 VALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTWVAGYALQCVVHMVCVAIEYRMRRGQ- 88
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R + E S ++ S++ E++ R + T+ + +
Sbjct: 89 -------RDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVS-------------I 128
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----PF 284
H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 129 AKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALAC 188
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L D GA+ + I +P YKF+ D +G
Sbjct: 189 IIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFG 245
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
G + GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+C
Sbjct: 246 GIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATC 305
Query: 403 PLCKSEI 409
PLCK I
Sbjct: 306 PLCKFNI 312
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 153/315 (48%), Gaps = 44/315 (13%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ +++ +I ++ VL LS E P+ P AWIV Y C + + +R R
Sbjct: 91 VVIDVLWSLAIVIIAVGVLGLSLEEKPRVPFRAWIVAYILLCSCHVVCVVVEYRKRR--- 147
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
+ LR+ L + S + + ST+ +GQN +
Sbjct: 148 ---NLGLRESGILSSD---------------SGDSLDFSTQQSENDGQN--------TSV 181
Query: 230 VDHFKMALDCFFAVWFVVGNVWI--FGGHSSPSDAPKLYRLCIVFLT----FSCIGYAMP 283
+ A+ F +W+++G W+ G + D+P+LY LCI FL F I A+
Sbjct: 182 AKRVESAMTTFSIIWWIIGFYWVTTAGRQNVAKDSPQLYWLCIAFLAADTLFVIICIAVA 241
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLND-QDNSGG 342
++ +CC LPCII +L D GAT E I+ L YKF + GN D S
Sbjct: 242 CLIGIAVCCFLPCIIGILYAMAD---QEGATKEEIDRLLKYKFH--RIGNCEKVNDESQE 296
Query: 343 TEGGVLA---AGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
+ GG++ T ER +S ED CCICL+ Y D ELREL C H FH C+DKWL IN
Sbjct: 297 SFGGMMTECDTDTPIERALSREDTECCICLSAYEDGSELRELPCGHHFHCMCIDKWLCIN 356
Query: 400 ASCPLCKSEIGDSSS 414
A+CPLCK +I + S
Sbjct: 357 ATCPLCKFDILKADS 371
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 148/309 (47%), Gaps = 48/309 (15%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
I ++++ ++ + ++ V S E+P+APL WIVGY C+ + + +R R
Sbjct: 32 IVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNR 91
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
D DS +S+ Q S + E E+GN +
Sbjct: 92 DLDS--------------------GLSSVQGSS--DGYGAEIESGNS------------V 117
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFG-GHSSPSDAPKLYRLCIVFLTFSCI----GYAMPF 284
+ F VW+V+G W+ +P+LY LC+ FL F I A+
Sbjct: 118 AKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVAC 177
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG-NLNDQDNSGGT 343
++ +CCCLPCII+VL D GA+ E I LP +KF + +N +N + T
Sbjct: 178 LIGIAVCCCLPCIIAVLYALAD---REGASDEEIEKLPKFKFLTVRNSEKVNGEIRE--T 232
Query: 344 EGGV---LAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
GG+ L + ER++S ++A CCICL Y D ELREL C H FH C+DKWL+INA
Sbjct: 233 RGGIMTQLGVDSPSERVLSSDEAECCICLCDYEDGTELRELSCRHHFHEACIDKWLRINA 292
Query: 401 SCPLCKSEI 409
+CPLCK I
Sbjct: 293 TCPLCKFNI 301
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 149/295 (50%), Gaps = 46/295 (15%)
Query: 133 NENPQAPLFAWIVGYA-SGCVATLPILYWRFRNRHQG--IDSDSTQLRQGSSLPTPPEPT 189
E P PL WI+GY G V ++ ++ FR R +G ++ D + L G +
Sbjct: 102 EEEPCVPLRVWILGYLLQGLVHSVCVVL-EFRRRRRGSYLEDDDSVLENGLRWSF----S 156
Query: 190 SSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGN 249
S + A++ EEN+ E+ N L+F +W+++G
Sbjct: 157 SESDSDFASEHESEENSIIKHIESAN--TILSF--------------------IWWILGF 194
Query: 250 VWI-FGGHSSPSDAPKLYRLCIVFLTF----SCIGYAMPFILCATICCCLPCIISVLGIR 304
W+ GG S D+P+LY LCI FL F I A+ ++ +CCCLPCI+++L
Sbjct: 195 YWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVACLIGIAVCCCLPCILAILYAV 254
Query: 305 EDYSQTRGATAETINALPTYKFK----SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
D +GAT E I+ LP YKF+ SK+ G+ + TE T E +I+
Sbjct: 255 AD----QGATMEEIDQLPKYKFRMIKESKEEGDAQESSRGVMTECD---NDTASEHVIAL 307
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
EDA CCICL+ Y D ELREL C+H FH C+DKWL I A+CPLCK +I + +P
Sbjct: 308 EDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLICATCPLCKFDILSTDNP 362
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 154/316 (48%), Gaps = 35/316 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++LI ++ + ++VVL +S++E P PL W++GYA CV + +
Sbjct: 30 VVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCVLHMSCVV---------- 79
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S SS + D E + + E + +F L
Sbjct: 80 ----------SEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHSLLTGSSFFP-FCSL 128
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSS-PSDAPKLYRLCIVFLTFSCIGYAM----PF 284
+ A F VW+VVG WI G + +P++Y LCIVFL F
Sbjct: 129 AKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALAC 188
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNL-----NDQDN 339
++ +CCCLPCII++L D GA+ E I+ LPT KFK +N + +++D
Sbjct: 189 MIGIAVCCCLPCIIAILYAVVD---QEGASEEDISVLPTLKFKRVRNPSCSSTKPDEEDK 245
Query: 340 SGGTEGGVLAAGTEK-ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
+ GGV+ + +RM+S EDA CCICL+ Y DD ELREL C+H FH C+ KWL+I
Sbjct: 246 AALPAGGVMCSSESLFQRMLSAEDAECCICLSSYEDDAELRELPCNHHFHGSCIVKWLRI 305
Query: 399 NASCPLCKSEIGDSSS 414
NA+CPLCK I SS
Sbjct: 306 NATCPLCKYNIIHRSS 321
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 161/316 (50%), Gaps = 35/316 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++LI ++ + ++VVL +S++E P PL W++GYA CV + + +R R +
Sbjct: 30 VVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCVLHMSCVVSEYRRRRRRR 89
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S + G L + + S+EE +R G + F L
Sbjct: 90 SSGA-----GMELEDMEDN-------EIDHISNEEKHRLL-----TGSSFFPFCS----L 128
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSS-PSDAPKLYRLCIVFLTFSCIGYAM----PF 284
+ A F VW+VVG WI G + +P++Y LCIVFL F
Sbjct: 129 AKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALAC 188
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNL-----NDQDN 339
++ +CCCLPCII++L D GA+ E I+ LPT KFK K+ + +++D
Sbjct: 189 MIGIAVCCCLPCIIAILYAVVD---QEGASEEDISVLPTLKFKRVKSPSCSSTKPDEEDK 245
Query: 340 SGGTEGGVLAAGTEK-ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
+ GGV+ + +RM+S EDA CCICL+ Y DD ELREL C+H FH C+ KWL+I
Sbjct: 246 AALPAGGVMCSSESLFQRMLSAEDAECCICLSSYEDDAELRELPCNHHFHGSCIVKWLRI 305
Query: 399 NASCPLCKSEIGDSSS 414
NA+CPLCK I SS
Sbjct: 306 NATCPLCKYNIIHRSS 321
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 169/366 (46%), Gaps = 58/366 (15%)
Query: 54 RMASPQHEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVE 113
R +SP+ + + G S +S R R +G + P+ ++++
Sbjct: 20 RQSSPRRPPVIAVLLGRASGRRGASMVVRETAAQELEERRADWGYSK--PV-----VALD 72
Query: 114 LIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDS 173
++ + ++ +IV+L + + E P P+ WI GYA C+ + +++ FR R+ +
Sbjct: 73 MLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVLVWLEFRKRNARTRTGD 132
Query: 174 TQLRQGSSLPTPPEPTSSYTAISANQASDEENN--RSTETETGNGQNALNFGGRLNGLVD 231
+ QGS N S++E+N R T+T N +
Sbjct: 133 LEAAQGS----------------GNHDSEDEDNDERILSTKTCESMNTI----------- 165
Query: 232 HFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATI 290
+W++ G W+ GG +A LY L +FL F +L I
Sbjct: 166 --------ISFIWWIAGFYWLVSGGDILLQNATHLYWLTFIFLAFDVFFAIFCVVLACLI 217
Query: 291 ----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGG 346
CCCLPCII++L + GA+ ++ LP Y+F++ N +++ + GG +
Sbjct: 218 GIALCCCLPCIIALL---YAVAGQEGASEADLSILPKYRFQALNN---DEKQSDGGGKMI 271
Query: 347 VLAAGTE---KERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
+ AG+E KER++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+NA+CP
Sbjct: 272 PVEAGSENMGKERVLLPEDADCCICLSSYEDGAELVSLSCNHHFHSTCIVKWLKMNATCP 331
Query: 404 LCKSEI 409
LCK I
Sbjct: 332 LCKFNI 337
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 78 SSSNRLNNRSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNE 134
+S R+ S ++R + R+ S + ++++ ++ ++ + VL LS +E
Sbjct: 50 ASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASE 109
Query: 135 NPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTA 194
P PL WIVGYA CV + + +R P +S
Sbjct: 110 APGMPLRLWIVGYAMQCVLHMVFVCVEYRR---------------RRRQQPAAASSVQDR 154
Query: 195 ISANQASDEENNRS-TETETGNGQNAL--NFGGRLNGLVDHFKMALDCFFAVWFVVGNVW 251
+ ++ + ++R + + + + QN L + H + A F VW+++G W
Sbjct: 155 VGSSSGNLSVSSREGSASASASAQNVLLGQLDDESTSVAKHLESANTMFSFVWWIIGFYW 214
Query: 252 I-FGGHSSPSDAPKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCIISVLGIRED 306
+ GG + D+P+LY LCI+FL F A+ I+ +CCCLPCII++L D
Sbjct: 215 VSAGGQALAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVTD 274
Query: 307 YSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLA---AGTEKERMISGEDA 363
GA+ E I L +KF+ + N G GG++ A + E ++ EDA
Sbjct: 275 ---QEGASKEDIEQLSKFKFR-RIESNEKLTGTIQGPVGGIMTECQADSPIEHALAEEDA 330
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
CCICL+ Y D ELREL C H FH CVDKWL INA+CPLCK I SS+
Sbjct: 331 ECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSSN 381
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 158/317 (49%), Gaps = 41/317 (12%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++++ +S +I SIV+L + E P P+ WI GYA C + +++ +R R++
Sbjct: 2014 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRR 2073
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
D Q +Q P+ + S N + DE+ N S G N + R +
Sbjct: 2074 VRDEEQQQQ-------PQHSDS----DVNDSEDEDGNSSAS----GGFNQSSVTKRCESV 2118
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+ F +W++VG W+ GG + +AP+LY L +VFL F +L
Sbjct: 2119 -----NTMASF--LWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLAC 2171
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP Y+F++ N+++ SG
Sbjct: 2172 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPRYRFEA------NNEEKSGVGA 2222
Query: 345 GGVLAAGTE-----KERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ T ER++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+N
Sbjct: 2223 GTMIPTETSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMN 2282
Query: 400 ASCPLCKSEIGDSSSPL 416
A+CPLCK I S +
Sbjct: 2283 ATCPLCKYNILKGSEQI 2299
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 163/352 (46%), Gaps = 61/352 (17%)
Query: 71 PSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSL 130
PS +++ +L R S G GY + P+ + ++++ ++ +I ++ VL L
Sbjct: 5 PSVRVRENAAEQLEERQS----GWGYSK----PI-----VLIDVLRNLAFVIIAVGVLGL 51
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S E P+ PL WIVGY C+ + + +R R +S L GS
Sbjct: 52 SLEEKPKVPLRVWIVGYGLQCLCHVVCVVVEYRKRRNLGFEESGILSSGSG--------D 103
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNV 250
S + +D E+ + ++ +W+V+G
Sbjct: 104 SLGFGTHRSGNDGEDTSRVPKRVESASTMVS--------------------VIWWVIGFY 143
Query: 251 WI--FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCAT--------ICCCLPCIISV 300
W+ G ++P+LY LC+ FL F A+ I+CA +CCCLPCII +
Sbjct: 144 WVTAAGRQDLEENSPQLYWLCVTFLAFD----ALFVIICAAAACLIGIAVCCCLPCIIGI 199
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA---GTEKERM 357
L D + GATAE I+ LP YKF + D +N GG++ T ER
Sbjct: 200 LYAMTDPQE--GATAEEIDRLPKYKFCRAEAFEKVDGENPEIC-GGMMTECDNDTPIERA 256
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+S EDA CCICL+ Y + ELREL C+H FH C+DKWL INA+CPLCK I
Sbjct: 257 VSHEDAECCICLSAYENGSELRELPCNHHFHCMCIDKWLCINATCPLCKFNI 308
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 138/293 (47%), Gaps = 33/293 (11%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRH--QGIDSDSTQLRQGSSLPTPPEP 188
SR E+P PL WIVGYA C+ + + +R R G+ +
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 189 TSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVG 248
S ++ DE + + H + A F +W+++G
Sbjct: 169 GDSSQYVTLASLGDESST---------------------SVAKHLESANTMFSFIWWIIG 207
Query: 249 NVWI-FGGHSSPSDAPKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCIISVLGI 303
W+ GG + D+P+LY LCI+FL F A+ ++ +CCCLPCII++L
Sbjct: 208 FYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYA 267
Query: 304 REDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGE 361
D GA+ E I+ L +KF+ + D D G G + GT+ E ++S E
Sbjct: 268 VAD---QEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQE 324
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
DA CCICL+ Y D ELREL C H FH CVDKWL INA+CPLCK I SSS
Sbjct: 325 DAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSS 377
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 175/351 (49%), Gaps = 24/351 (6%)
Query: 76 SSSSSNRLNNRSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSR 132
S +SS R+ S ++R + R+ S + ++++ ++ + + +L +SR
Sbjct: 64 SRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSR 123
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E+P PL W++GYA CV + + ++ R+ + T P S
Sbjct: 124 KEHPIMPLRVWLLGYALQCVLHMVCV---------CVEYRRRNRRRTNRTTTTTPPRSRS 174
Query: 193 TAISANQASDEENNRSTETETGNGQNAL-NFGGRLNGLVDHFKMALDCFFAVWFVVGNVW 251
++ S++ +S EE + +G +L + + + H + A F +W+++G W
Sbjct: 175 SSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYW 234
Query: 252 I-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIRED 306
+ GG ++P++Y L IVFL F A+ ++ +CCCLPCII+VL D
Sbjct: 235 VSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAD 294
Query: 307 YSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLA-AGTEK--ERMISGEDA 363
GA+ E I L +KF+ + N + D + GT G++ GT+ E + EDA
Sbjct: 295 ---QEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDA 351
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
CCICL+ Y D ELREL C H FH CVDKWL INA+CPLCK I SS+
Sbjct: 352 ECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSN 402
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 143/300 (47%), Gaps = 50/300 (16%)
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
++ + V+L S +ENP P+ WI GYA C+ + ++ +R R+
Sbjct: 69 VVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRN-------------- 114
Query: 181 SLPTPPEPTSSYTAISANQASDEEN-NRSTETETGNGQNALN-----FGGRLNGLVDHFK 234
I + DEE+ + ++E + LN F R + L
Sbjct: 115 -------------VIGGGRERDEESLDDVNDSEEDDDVEFLNSSSSGFAKRCSSLNTMLS 161
Query: 235 MALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTF----SCIGYAMPFILCAT 289
+ +W++VG W+ GG DAP+LY L +VFL F + A+ ++
Sbjct: 162 L-------LWWMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIA 214
Query: 290 ICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLA 349
+CCCLPCII GI + GA+ ++ LP Y+F+ GN GG+ +
Sbjct: 215 LCCCLPCII---GILYAVAGQEGASESDLSTLPKYRFQVP--GNEETPSPKGGSMVPIEN 269
Query: 350 AGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ ER++S EDA CCIC++ Y D+ EL L C+H FH C+ KWLK+NA+CPLCK I
Sbjct: 270 SSGANERVLSPEDAECCICISPYEDEAELHALPCNHHFHSTCIVKWLKMNATCPLCKFNI 329
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 186/426 (43%), Gaps = 85/426 (19%)
Query: 28 TDRDHIIDIT--TTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRLNN 85
++ D IID T + + S DE+ ++P H + + S R+
Sbjct: 27 SNSDGIIDTTPFLPPTVTRTISVDEE----SNPIHRSARRQGLREAARFLRHAGSRRMMR 82
Query: 86 RSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
S ++R + R+ S + ++++ ++ + + VL LSR+E P PL
Sbjct: 83 EPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRV 142
Query: 143 WIVGYASGC---VATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQ 199
W+VGY C +A + + Y R R R D + L SS Y +++ +
Sbjct: 143 WVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSS--------QQYVSLAQLE 194
Query: 200 ASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSS 258
E +N + E+ N F +W+++G W+ GG +
Sbjct: 195 DRGETSNPAKHLESANTM----------------------FSFIWWIIGFYWVSAGGQTL 232
Query: 259 PSDAPKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGAT 314
SD+P+LY LCI+FL F A+ ++ +CCCLPCII++L D GA+
Sbjct: 233 SSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVAD---QEGAS 289
Query: 315 AETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAV-------- 364
I+ +P ++F K GN+ + SG G + GT+ ER +S EDAV
Sbjct: 290 KNDIDQMPKFRF--TKTGNV--EKLSGKARGIMTECGTDSPIERSLSPEDAVQSHFHILI 345
Query: 365 ---------------------CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
CCICL +Y D ELREL C+H FH C+DKWL IN+ CP
Sbjct: 346 KLYILKVCKIDNAWLLMILQECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCP 405
Query: 404 LCKSEI 409
LCK I
Sbjct: 406 LCKFNI 411
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 153/313 (48%), Gaps = 29/313 (9%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++ + ++ + + VL LS +ENP PL W++GY C+ + + +R R+
Sbjct: 75 VVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVWVIGYGLQCMMHMVCVCVEYRRRNSRR 134
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
D + SS+ + ++ SD+ + E N N
Sbjct: 135 RRDMSPRSSSSSMEEE-------DGLGLSRNSDDRYLELGQLENEN-----------NSF 176
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPF 284
H + A +W+V+G W+ GG +P+LY LCIVFL F A+
Sbjct: 177 AKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALAC 236
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
++ +CCCLPCII+VL ++ GA+ E I+ L +KF+ + + D G
Sbjct: 237 VIGIAVCCCLPCIIAVLYA---VAEQEGASKEDIDQLTKFKFRKVGDSVKHTVDEEQGDS 293
Query: 345 GGVLA-AGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
GG++ GT+ E + EDA CCICL+ Y D+ ELREL C H FH CVDKWL INA+
Sbjct: 294 GGLMTECGTDSPVEHTLPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINAT 353
Query: 402 CPLCKSEIGDSSS 414
CPLCK I SS+
Sbjct: 354 CPLCKYNILKSSN 366
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 41/306 (13%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++++ +S +I SIV+L + E P P+ WI GYA C + +++ +R R +
Sbjct: 70 VALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRR 129
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
D Q +Q P+ + S N + DE+ N S G N + R +
Sbjct: 130 VRDEEQQQQ-------PQHSDS----DVNDSEDEDGNSSA----SGGFNQSSVTKRCESV 174
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+W++VG W+ GG + +AP+LY L +VFL F +L
Sbjct: 175 NTMASF-------LWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLAC 227
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP Y+F++ N+++ SG
Sbjct: 228 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPRYRFEA------NNEEKSGVGA 278
Query: 345 GGVLAAGTE-----KERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G + T ER++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+N
Sbjct: 279 GTMFPTETSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMN 338
Query: 400 ASCPLC 405
A+CPLC
Sbjct: 339 ATCPLC 344
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 23/314 (7%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ ++ + + +L +SRNE+P PL W++GYA CV + +
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRNEHPIMPLRVWLLGYALQCVLHMVC-----------V 78
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNAL-NFGGRLNG 228
+ + + + T P S ++ S++ +S EE+ + +G +L + +
Sbjct: 79 CVEYRRRNRRRTNRTTTTPRSRSSSSSSSSSSLEEDALGSRRNSGEQDLSLGHLDTESSS 138
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMP 283
+ H + A F +W+++G W+ GG ++P++Y L IVFL F A+
Sbjct: 139 VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALA 198
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
++ +CCCLPCII+VL D GA+ E I L +KF+ + N + D + GT
Sbjct: 199 CVIGIAVCCCLPCIIAVLYAVAD---QEGASKEDIEQLTKFKFRKVGDANRHTGDEAQGT 255
Query: 344 EGGVLA-AGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
G++ GT+ E + EDA CCICL+ Y D ELREL C H FH CVDKWL INA
Sbjct: 256 TEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINA 315
Query: 401 SCPLCKSEIGDSSS 414
+CPLCK I SS+
Sbjct: 316 TCPLCKYNILKSSN 329
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 156/298 (52%), Gaps = 50/298 (16%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S+ E P+ PL WIVGYA C+ + + +R R + I LR GS P E T
Sbjct: 99 SKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRI------LRGGSG---PAENTV 149
Query: 191 SY-TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGN 249
++ +A S ++ E ++ S E+ N F VW+V+G
Sbjct: 150 AHLSAGSESEIDMEAHSLSKRLESANTM----------------------FSFVWWVIGF 187
Query: 250 VWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIR 304
WI GG + +P+LY L +VFL F A+ ++ +CCCLPCII++L
Sbjct: 188 YWITAGGQALTQHSPRLYWLSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAV 247
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLN----DQDNSGGTEGGVLA----AGTEKER 356
D GA+ E IN +P +KF+ ++G+++ ++ + + GG++A + ER
Sbjct: 248 AD---QEGASEEDINLIPRFKFR--RSGSIDTCIIEKADKAPSLGGIMALVGSSDPSSER 302
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
+S EDA CCICL+ Y D ELREL C+H FH C+DKWL+INA+CPLCK I +SS
Sbjct: 303 GLSSEDAECCICLSPYDDGVELRELPCNHHFHCSCIDKWLRINATCPLCKFNIIHNSS 360
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 52/310 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++++ + ++ +IV+L + + E P P+ WI GYA C+ + +++ FR R+
Sbjct: 69 VALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRN--- 125
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENN--RSTETETGNGQNALNFGGRLN 227
P A + NQ S++E+N R T+T N +
Sbjct: 126 --------------ARSRPGDLEAAQATNQDSEDEDNDERFLSTKTCESMNTI------- 164
Query: 228 GLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFIL 286
VW++VG W+ GG +A LY L VFL F +L
Sbjct: 165 ------------ISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVL 212
Query: 287 CATI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG 342
I CCCLPCII++L + GA+ ++ LP Y+F + N +++ + GG
Sbjct: 213 ACLIGIALCCCLPCIIALL---YAVAGQEGASEADLSILPKYRFHTMNN---DEKQSDGG 266
Query: 343 TEGGVLAAGTEK---ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
+ + A +E ER++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+N
Sbjct: 267 GKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMN 326
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 327 ATCPLCKFNI 336
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 144/309 (46%), Gaps = 50/309 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++++ + ++ +IV+L + + E P P+ WI GYA C+ + +++ FR R+
Sbjct: 69 VALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRN--- 125
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENN--RSTETETGNGQNALNFGGRLN 227
P A + NQ S++E+N R T+T N +
Sbjct: 126 --------------ARSRPGDLEAAQATNQDSEDEDNDERFLSTKTCESMNTI------- 164
Query: 228 GLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFIL 286
VW++VG W+ GG +A LY L VFL F +L
Sbjct: 165 ------------ISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVL 212
Query: 287 CATI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG 342
I CCCLPCII++L + GA+ ++ LP Y+F + N Q + GG
Sbjct: 213 ACLIGIALCCCLPCIIALL---YAVAGQEGASEADLSILPKYRFHTMNNDE--KQSDGGG 267
Query: 343 TEGGVLAAGTE--KERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
V AA ER++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+NA
Sbjct: 268 KMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNA 327
Query: 401 SCPLCKSEI 409
+CPLCK I
Sbjct: 328 TCPLCKFNI 336
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 155/298 (52%), Gaps = 50/298 (16%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S+ E P+ PL WIVGYA C+ + + +R R + I LR GS P E T
Sbjct: 99 SKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRI------LRGGSG---PAENTV 149
Query: 191 SY-TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGN 249
+ +A S ++ E ++ S E+ N F VW+V+G
Sbjct: 150 GHLSAGSESEIDMEAHSLSKRLESANTM----------------------FSFVWWVIGF 187
Query: 250 VWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIR 304
WI GG + +P+LY L +VFL F A+ ++ +CCCLPCII++L
Sbjct: 188 YWITAGGQALTQHSPRLYWLSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAV 247
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLN----DQDNSGGTEGGVLA----AGTEKER 356
D GA+ E IN +P +KF+ ++G+++ ++ + + GG++A + ER
Sbjct: 248 AD---QEGASEEDINLIPRFKFR--RSGSIDTCIIEKADKAPSLGGIMALVGSSDPSSER 302
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
+S EDA CCICL+ Y D ELREL C+H FH C+DKWL+INA+CPLCK I +SS
Sbjct: 303 GLSSEDAECCICLSPYDDGVELRELPCNHHFHCSCIDKWLRINATCPLCKFNIIHNSS 360
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 161/314 (51%), Gaps = 21/314 (6%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ ++ + + +L +SR E+P PL W++GYA CV + + +
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCV---------CV 80
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNAL-NFGGRLNG 228
+ R+ + T P S ++ S++ +S EE + +G +L + +
Sbjct: 81 EYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSS 140
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMP 283
+ H + A F +W+++G W+ GG ++P++Y L IVFL F A+
Sbjct: 141 VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALA 200
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
++ +CCCLPCII+VL D GA+ E I L +KF+ + N + D + GT
Sbjct: 201 CVIGIAVCCCLPCIIAVLYAVAD---QEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGT 257
Query: 344 EGGVLA-AGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
G++ GT+ E + EDA CCICL+ Y D ELREL C H FH CVDKWL INA
Sbjct: 258 TEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINA 317
Query: 401 SCPLCKSEIGDSSS 414
+CPLCK I SS+
Sbjct: 318 TCPLCKYNILKSSN 331
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 147/300 (49%), Gaps = 42/300 (14%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDS--DSTQLRQGSSLPTPP-- 186
S +E P PL WIVGYA CV + + +R R + + S Q R GSS
Sbjct: 106 SASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVS 165
Query: 187 --EPTSSYTA--ISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFA 242
E ++S +A +S Q DE + + E+ N F
Sbjct: 166 SREGSASGSAQYVSLGQLDDEGTSVAKHLESANTM----------------------FSF 203
Query: 243 VWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCI 297
VW+++G W+ GG + D+P+LY LCI+FL F A+ I+ +CCCLPCI
Sbjct: 204 VWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCI 263
Query: 298 ISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLA---AGTEK 354
I++L D GA+ E I L +KF+ + N G GG++ A +
Sbjct: 264 IALLYAVAD---QEGASKEDIEQLSKFKFR-RIESNEKLTGTIQGPVGGIMTECQADSPI 319
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
E +++ EDA CCICL+ Y D ELREL C H FH CVDKWL INA+CPLCK I S++
Sbjct: 320 EHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSNT 379
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 10/193 (5%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFL----TFSCIGYAMP 283
+ H + A F +W+++G W+ GG + D+P+LY LCI+FL F A+
Sbjct: 177 VAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALA 236
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
++ +CCCLPCII++L D GA+ E I+ L +KF+ + D D G
Sbjct: 237 CVIGIAVCCCLPCIIAILYAVAD---QEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGAC 293
Query: 344 EGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G + GT+ E ++S EDA CCICL+ Y D ELREL C H FH CVDKWL INA+
Sbjct: 294 GGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINAT 353
Query: 402 CPLCKSEIGDSSS 414
CPLCK I SSS
Sbjct: 354 CPLCKYNILKSSS 366
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 171/376 (45%), Gaps = 46/376 (12%)
Query: 47 SYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDG---YGRRRRSP 103
S + +PH +D P++ T + S+ S ++R RR
Sbjct: 2 STENEPHAPLLRPRQDPPTSPTSRQTTLSALLGRATGRRGPSMLVRETAARELDERRADW 61
Query: 104 LNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFR 163
S +S++++ + ++ S+ +L ++ E P P+ WI GYA C+ + +++ +R
Sbjct: 62 GYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYR 121
Query: 164 NRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFG 223
R+ + D +Q + PE SDEE++R++ + +
Sbjct: 122 RRNTRRERDIESQQQSTEEENVPE-------------SDEEDDRASFISPRS--SVTKRC 166
Query: 224 GRLNGLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAM 282
+N +V +W++VG W+ GG +AP LY L +VFL F
Sbjct: 167 ESVNTMVSF----------LWWMVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFDVFFAIF 216
Query: 283 PFILCATI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD 338
+L I CCCLPCII++L + GA+ + LP YKF+ +N ++
Sbjct: 217 CVVLACLIGIALCCCLPCIIAIL---YAVAGQEGASEADLIQLPKYKFQMIRN-----EE 268
Query: 339 NSGGTEGGVLAAGTEK-----ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVD 393
G G ++ T ER++ EDA CCICL+ Y D EL L C+H FH C+
Sbjct: 269 KPGIEAGKMVPVETSSRFLGTERILLPEDAECCICLSPYEDGAELHALPCNHHFHATCIV 328
Query: 394 KWLKINASCPLCKSEI 409
KWLK+NA+CPLCK I
Sbjct: 329 KWLKMNATCPLCKFNI 344
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 55/310 (17%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+++++ ++ ++ S V+L+ + ENP P+ WI GYA C+ + +++ +R R+
Sbjct: 63 VALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDA- 121
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
P E +S N SDE+ + + N +L
Sbjct: 122 -------------PRDEESAASLQYDDVND-SDEDARFTKRCASLNTMISL--------- 158
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+W++VG W+ GG DAP+LY L +VFL F +L
Sbjct: 159 -------------LWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLAC 205
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP Y+F+ L++++ G
Sbjct: 206 LIGIALCCCLPCIIAIL---YAVAGQEGASESDLSILPKYRFQL-----LSNEETPGEGG 257
Query: 345 GGVLAAGTEK-----ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ T ER +S EDA CCIC++ Y D EL L C+H FH C+ KWLK+N
Sbjct: 258 GSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMN 317
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 318 ATCPLCKYNI 327
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 183/423 (43%), Gaps = 76/423 (17%)
Query: 28 TDRDHIIDIT--TTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRLNN 85
++ D IID T + + S DE+ ++P H + + S R+
Sbjct: 26 SNSDGIIDTTPFLPPIVTRTISVDEE----SNPIHRSARRQGLREAARFLRHAGSRRMVR 81
Query: 86 RSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFA 142
S ++R + R+ S + ++++ ++ + + VL LSR+E P PL
Sbjct: 82 EPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRV 141
Query: 143 WIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASD 202
W+VGY C + + +R R + S++ G + Y +++ +
Sbjct: 142 WVVGYGIQCWLHMACVCVEYRRRRRRRHRSSSEDGGGPGFTNSSQ--QQYVSLAQLEDRG 199
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSD 261
E +N + E+ N F +W+++G W+ GG + D
Sbjct: 200 ETSNPAKHLESANTM----------------------FSFIWWIIGFYWVSAGGQTLSGD 237
Query: 262 APKLYRLCIVFL----TFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAET 317
+P+LY LCI+FL F A+ ++ +CCCLPCII++L D GA+
Sbjct: 238 SPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVAD---QEGASKND 294
Query: 318 INALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAV----------- 364
I+ +P ++F K G ND+ SG G + GT+ ER +S EDAV
Sbjct: 295 IDQMPKFRF--TKIG--NDEKLSGKARGIMTECGTDSPIERSLSPEDAVHSHFHILMQLY 350
Query: 365 ------------------CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
CCICL +Y D ELREL C+H FH C+DKWL IN+ CPLCK
Sbjct: 351 IFKVCRLINSWLLMILKECCICLCEYEDGVELRELPCNHHFHCACIDKWLHINSRCPLCK 410
Query: 407 SEI 409
I
Sbjct: 411 FNI 413
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 10/193 (5%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFL----TFSCIGYAMP 283
+ H + A F +W+++G W+ GG + D+P+LY LCI+FL F A+
Sbjct: 74 VAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVALA 133
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
++ +CCCLPCII++L D GA+ E I+ L +KF+ + D D G
Sbjct: 134 CVIGIAVCCCLPCIIAILYAVAD---QEGASKEDIDQLSRFKFRKVGDIEKIDGDIQGAC 190
Query: 344 EGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G + GT+ E ++S EDA CCICL+ Y D ELREL C H FH CVDKWL INA+
Sbjct: 191 GGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCVDKWLYINAT 250
Query: 402 CPLCKSEIGDSSS 414
CPLCK I SSS
Sbjct: 251 CPLCKYNILKSSS 263
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 149/310 (48%), Gaps = 45/310 (14%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+++++ ++ ++ + V+L+ + E P P+ WIVGYA C+ + +L W R
Sbjct: 71 VALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHV-LLVWLEYRRRSRR 129
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
DS Q + + ++ S +E+ S + + +G + LN
Sbjct: 130 DSHHGQRARD---------------VESDAGSGDEDY-SDDRDWSSGYSFTKRCELLNTG 173
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
V +W++VG W+ GG+ DAP+LY L +VFL F +L
Sbjct: 174 VSF----------LWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLAC 223
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP Y+F+ L+D+D G
Sbjct: 224 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPKYRFRI-----LSDEDKPSGGA 275
Query: 345 GGVL-----AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ +A ER + EDA CCICL Y D EL L C+H FH C+ KWLK+N
Sbjct: 276 GSMVPIETSSAYLANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMN 335
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 336 ATCPLCKYNI 345
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 144/294 (48%), Gaps = 25/294 (8%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S +ENP PL WI+GY C+ + + +R R+ D + SS +
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSS-SSSSSSSSSMD 154
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNV 250
+ ++ SDE + E N N H + A +W+V+G
Sbjct: 155 EEEGLGLSRNSDERYLELGQLENEN-----------NSFAKHLESANTMISFIWWVIGFY 203
Query: 251 WIF-GGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIRE 305
W+ GG +P+LY LCIVFL F A+ ++ +CCCLPCII+VL
Sbjct: 204 WVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYA-- 261
Query: 306 DYSQTRGATAETINALPTYKFKSKKN--GNLNDQDNSGGTEGGVLA-AGTEK--ERMISG 360
++ GA+ E I+ L +KF+ + + D++ G GGV+ GT+ E +
Sbjct: 262 -VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPH 320
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
EDA CCICL+ Y D+ ELREL C H FH CVDKWL INA+CPLCK I SS+
Sbjct: 321 EDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSN 374
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 144/294 (48%), Gaps = 25/294 (8%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S +ENP PL WI+GY C+ + + +R R+ D + SS +
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS-SMD 154
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNV 250
+ ++ SDE + E N N H + A +W+V+G
Sbjct: 155 EEEGLGLSRNSDERYLELGQLENEN-----------NSFAKHLESANTMISFIWWVIGFY 203
Query: 251 WIF-GGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIRE 305
W+ GG +P+LY LCIVFL F A+ ++ +CCCLPCII+VL
Sbjct: 204 WVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYA-- 261
Query: 306 DYSQTRGATAETINALPTYKFKSKKN--GNLNDQDNSGGTEGGVLA-AGTEK--ERMISG 360
++ GA+ E I+ L +KF+ + + D++ G GGV+ GT+ E +
Sbjct: 262 -VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGEGDSGGVMTECGTDSPVEHALPH 320
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
EDA CCICL+ Y D+ ELREL C H FH CVDKWL INA+CPLCK I SS+
Sbjct: 321 EDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSN 374
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 60/323 (18%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRF--RNRHQ 167
+++++ ++ + S+ VL S +E P P+ WIV YA+ C+ + ++++ F RN +
Sbjct: 78 VALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARR 137
Query: 168 GIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGR-- 225
D ++ Q +Q T SDE++ GQ +L+ +
Sbjct: 138 ARDMETQQQQQPDGYVT--------------NESDEDDG---------GQRSLSSVAKRC 174
Query: 226 --LNGLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAM 282
+N LV +W++ G W+ GG+ +AP LY L +VFL F
Sbjct: 175 ESVNTLVS----------LIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVF 224
Query: 283 PFILCATI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQD 338
+L I CCCLPCII++L + GAT ++ LP Y+++ ++++
Sbjct: 225 CVVLACLIGIALCCCLPCIIAIL---YAVAGQEGATDADLSMLPKYRYR------VSNEP 275
Query: 339 NSGGTEGGVLAAGTEK-----ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVD 393
+ G +G ++ T ER++ EDA CCICL+ Y D EL L C+H FH C+
Sbjct: 276 SPG--DGLMVPVETSSRYLTTERVLLREDAECCICLSPYEDGVELHALPCNHHFHYACIT 333
Query: 394 KWLKINASCPLCKSEIGDSSSPL 416
KWLK+NA+CPLCK I +S P+
Sbjct: 334 KWLKMNATCPLCKYNILKNSEPV 356
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 148/310 (47%), Gaps = 45/310 (14%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+++++ ++ ++ S V+L+ + ENP P+ WI GYA C+ + +++ +R R+
Sbjct: 63 VALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDA- 121
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
P E +S Q D ++ + T ++ F R L
Sbjct: 122 -------------PRDEESAASL------QYDDVNDSDEDDVGTSGSSSSSGFTKRCASL 162
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+ +W++VG W+ GG DAP+LY L +VFL F +L
Sbjct: 163 NTMISL-------LWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLAC 215
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP Y+F+ L++++ G
Sbjct: 216 LIGIALCCCLPCIIAIL---YAVAGQEGASESDLSILPKYRFQL-----LSNEETPGEGG 267
Query: 345 GGVLAAGTEK-----ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ T ER +S EDA CCIC++ Y D EL L C+H FH C+ KWLK+N
Sbjct: 268 GSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMN 327
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 328 ATCPLCKYNI 337
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 38/314 (12%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++++ + ++ SI +L LS E P P+ WI GYA C+ + +++ +R R+
Sbjct: 667 VALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRR 726
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENN-RSTETETGNGQNALNFGGRLNG 228
D E + + EEN + ++E +G + + +
Sbjct: 727 VRDE-------------ERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSS 773
Query: 229 LVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILC 287
++ + +W++VG W+ GG +AP LY L +VFL F +L
Sbjct: 774 VIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLA 833
Query: 288 ATI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG- 342
I CCCLPCII++L + GA+ ++ LP Y+F+ + ++ S G
Sbjct: 834 CLIGIALCCCLPCIIAIL---YAVAGQEGASEADLSILPKYRFQL----TVEEEKPSVGA 886
Query: 343 -------TEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKW 395
T G LA ER++ EDA CCICL Y D EL L C+H FH C+ KW
Sbjct: 887 GKMVPIETSSGYLA----NERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKW 942
Query: 396 LKINASCPLCKSEI 409
LK+NA+CPLCK I
Sbjct: 943 LKMNATCPLCKYNI 956
>gi|29367395|gb|AAO72570.1| putative ATP synthetase alpha chain [Oryza sativa Japonica Group]
Length = 198
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 107/184 (58%), Gaps = 3/184 (1%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS 80
MEQ + +HIIDI S+S+S+ P D +T VP+ + S+
Sbjct: 1 MEQTTGVSGHEHIIDIPRDSGPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVG 60
Query: 81 NRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPL 140
+S R D Y RR RSPLNSGLWIS+E++V VSQI+A+IVVLSLSR E+PQAPL
Sbjct: 61 APSAGHTSGARRSDNYVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPL 120
Query: 141 FAWIVGYASGCVATLPILYWRF--RNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISAN 198
F W++GY GC ATLP LYWR+ RN G +++ QGSS EP++S + N
Sbjct: 121 FEWVIGYTVGCFATLPHLYWRYIHRNIVNG-ENEPAHTLQGSSQNNSTEPSASASERRRN 179
Query: 199 QASD 202
A +
Sbjct: 180 AARN 183
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 128/284 (45%), Gaps = 53/284 (18%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E P PL WIVGY C+ + + +R R + D +
Sbjct: 112 GERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEG------------------- 152
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
A DE+ S +V H + A F +W++VG W+
Sbjct: 153 -------AGDEDLKLS--------------------IVKHLESANTMFSFIWWIVGFYWV 185
Query: 253 -FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF----ILCATICCCLPCIISVLGIREDY 307
GG + DAP+LY L IVFL F ++ +CCCLPCII++L D
Sbjct: 186 SAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 245
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVC 365
GA+ + IN L +KF++ + + + G + GT E ++S EDA C
Sbjct: 246 VSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDAEC 305
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CICL Y D ELREL C+H FH C+DKWL INA+CPLCK +I
Sbjct: 306 CICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 349
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 141/289 (48%), Gaps = 25/289 (8%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S +ENP PL WI+GY C+ + + +R R+ D + SS +
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSS-SSSSSSSSSMD 154
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNV 250
+ ++ SDE + E N N H + A +W+V+G
Sbjct: 155 EEEGLGLSRNSDERYLELGQLENEN-----------NSFAKHLESANTMISFIWWVIGFY 203
Query: 251 WIF-GGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIRE 305
W+ GG +P+LY LCIVFL F A+ ++ +CCCLPCII+VL
Sbjct: 204 WVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYA-- 261
Query: 306 DYSQTRGATAETINALPTYKFKSKKN--GNLNDQDNSGGTEGGVLA-AGTEK--ERMISG 360
++ GA+ E I+ L +KF+ + + D++ G GGV+ GT+ E +
Sbjct: 262 -VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPH 320
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EDA CCICL+ Y D+ ELREL C H FH CVDKWL INA+CPLCK I
Sbjct: 321 EDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 130/288 (45%), Gaps = 53/288 (18%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E P PL WIVGY C+ + + +R R + D +
Sbjct: 112 GERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEG------------------- 152
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
A DE+ S +V H + A F +W++VG W+
Sbjct: 153 -------AGDEDLKLS--------------------IVKHLESANTMFSFIWWIVGFYWV 185
Query: 253 -FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF----ILCATICCCLPCIISVLGIREDY 307
GG + DAP+LY L IVFL F ++ +CCCLPCII++L D
Sbjct: 186 SAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 245
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVC 365
GA+ + IN L +KF++ + + + G + GT E ++S EDA C
Sbjct: 246 VSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDAEC 305
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
CICL Y D ELREL C+H FH C+DKWL INA+CPLCK +I S+
Sbjct: 306 CICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDIIKSN 353
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 109/194 (56%), Gaps = 13/194 (6%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFS------CIGYA 281
+V H + A F +W+++G W+ GG + DAP+LY L IVFL F CI A
Sbjct: 4 IVKHLESANTMFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCI--A 61
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
+ ++ +CCCLPCII +L D Q GA+ + +N L +KF++ + + +
Sbjct: 62 LACVIGIAVCCCLPCIIGILYAVTD--QEEGASEDDVNNLSKFKFRTMSDADKLAAGIAA 119
Query: 342 GTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G + GT E ++S EDA CCICL Y D ELREL C+H FH C+DKWL IN
Sbjct: 120 PVGGVMTECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHIN 179
Query: 400 ASCPLCKSEIGDSS 413
A+CPLCK I S+
Sbjct: 180 ATCPLCKFNIVKSN 193
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 141/317 (44%), Gaps = 59/317 (18%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++L + + S++VL LS E P APL W+ GYA C+ + ++ + R
Sbjct: 76 LVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRR---- 131
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S++ R G NR + E N + RL
Sbjct: 132 ---SSRYRLGFE------------------------NRGAQDELRLSHNRIRVMKRLE-- 162
Query: 230 VDHFKMALDCFFA-VWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFS------CIGYA 281
AL+ A +W+V G WI GG + +P+LY L +VFL F C G
Sbjct: 163 ------ALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTG-- 214
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
M F+ +CC +P L + GA+ + I ALP Y+F ++ L DN
Sbjct: 215 MAFVGFFAVCCIIP----FLAYGYTMNFLEGASEDEIRALPKYRFH--QDNPLESFDNDK 268
Query: 342 GTEGGVLAA----GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK 397
E G+ G E ++ ED+ CCICLA+YV +L L C+H FH C+ KWL+
Sbjct: 269 KQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLR 328
Query: 398 INASCPLCKSEIGDSSS 414
INA+CPLCK IG S
Sbjct: 329 INATCPLCKFSIGQGDS 345
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 131/288 (45%), Gaps = 55/288 (19%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E P PL WIVGY C+ + + +R R + D +
Sbjct: 112 GERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEG------------------- 152
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
A DE+ S +V H + A F +W++VG W+
Sbjct: 153 -------AGDEDLKLS--------------------IVKHLESANTMFSFIWWIVGFYWV 185
Query: 253 -FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF----ILCATICCCLPCIISVLGIREDY 307
GG + DAP+LY L IVFL F ++ +CCCLPCII++L D
Sbjct: 186 SAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD- 244
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVC 365
Q GA+ + IN L +KF++ + + + G + GT E ++S EDA C
Sbjct: 245 -QQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDAEC 303
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
CICL Y D ELREL C+H FH C+DKWL INA+CPLCK +I S+
Sbjct: 304 CICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDIIKSN 351
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 139 PLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISAN 198
PL W+ GYA CV + + +R R R + E S ++ S++
Sbjct: 2 PLRTWVAGYALQCVVHMVCVAIEYRMRRGQ--------RDRAPASADEERGSDGSSSSSD 53
Query: 199 QASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHS 257
E++ R + T+ + + H + A F +W+++G WI GG
Sbjct: 54 DDVTEDDRRGSCTDCVS-------------IAKHLESANTMFSFIWWIIGFYWISAGGED 100
Query: 258 SPSDAPKLYRLCIVFLTFSCIGYAM----PFILCATICCCLPCIISVLGIREDYSQTRGA 313
DAP+LY LCIVFL F I+ +CCCLPCII++L D GA
Sbjct: 101 VIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSD---QEGA 157
Query: 314 TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAK 371
+ + I +P YKF+ D +G G + GT + E++++ EDA CCICL+
Sbjct: 158 SEDDIRQIPRYKFRRTDEPEKQTADETGPFGGIMTECGTNQPIEKVLAPEDAECCICLSA 217
Query: 372 YVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
Y D ELREL C H FH C+DKWL INA+CPLCK I
Sbjct: 218 YDDGAELRELPCGHHFHCACIDKWLHINATCPLCKFNI 255
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 131/290 (45%), Gaps = 55/290 (18%)
Query: 131 SRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTS 190
S E+P PL WI GY C+ + + +R R + D +
Sbjct: 110 STGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRSRDADQEG----------------- 152
Query: 191 SYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNV 250
A DE+ S +V H + A F +W++VG
Sbjct: 153 ---------AGDEDFKLS--------------------VVKHLESANTMFSFIWWIVGFY 183
Query: 251 WI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF----ILCATICCCLPCIISVLGIRE 305
W+ GG + DAP+LY L IVFL F ++ +CCCLPCII++L
Sbjct: 184 WVSAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVT 243
Query: 306 DYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDA 363
D Q GA+ + IN L +KF++ + + + G + GT E ++S EDA
Sbjct: 244 D--QQEGASEDDINNLSKFKFRTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDA 301
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
CCICL Y D ELREL C+H FH C+DKWL INA+CPLCK I S+
Sbjct: 302 ECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFNIVKSN 351
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 50/311 (16%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+++++ ++ + S+ VL S +E P P+ WIV YA+ C+ + ++++ F+ R+
Sbjct: 78 VALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARR 137
Query: 170 DSD-STQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNG 228
D TQ +Q EP T N++ +++ + + + ++N L
Sbjct: 138 ARDMETQQQQ--------EPDGYVT----NESDEDDGGQRSFSSVAKRCESVNTMVSL-- 183
Query: 229 LVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILC 287
+W++ G W+ GG+ +AP LY L +VFL F +L
Sbjct: 184 --------------IWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLA 229
Query: 288 ATI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
I CCCLPCII++L + GAT ++ LP Y+++ ++++ + G
Sbjct: 230 CLIGIALCCCLPCIIAIL---YAVAGQEGATDADLSMLPKYRYR------VSNEPSPG-- 278
Query: 344 EGGVLAAGTEK-----ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
+G ++ T ER++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+
Sbjct: 279 DGLMVPVETSSRYLTTERVLLCEDAECCICLSPYEDGVELHALPCNHHFHYACITKWLKM 338
Query: 399 NASCPLCKSEI 409
NA+CPLCK I
Sbjct: 339 NATCPLCKYNI 349
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 39/310 (12%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+++++ ++ ++ S +L+ + +E+P P+ WIVGYA C+ + +++ +R R +
Sbjct: 70 VALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRD 129
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
+Q + Y+ + + +R F R L
Sbjct: 130 SRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSR--------------FAKRCESL 175
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+W++VG W+ GG DAP+LY L +VFL F +L
Sbjct: 176 NTGVSF-------LWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLAC 228
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP YKF+ L+D D G
Sbjct: 229 LIGIALCCCLPCIIAIL---YAVAGQEGASEADLSMLPKYKFRI-----LSDVDKPSGGA 280
Query: 345 GGVL-----AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN 399
G ++ +A E ER + EDA CCICL Y D EL L C+H FH C+ KWLK+N
Sbjct: 281 GSMVPIETSSAYLENERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMN 340
Query: 400 ASCPLCKSEI 409
A+CPLCK I
Sbjct: 341 ATCPLCKYNI 350
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 130/288 (45%), Gaps = 56/288 (19%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E P PL WIVGY C+ + + +R R + D +
Sbjct: 112 GERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRRNADQEG------------------- 152
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
A DE+ S +V H + A F +W++VG W+
Sbjct: 153 -------AGDEDLKLS--------------------IVKHLESANTMFSFIWWIVGFYWV 185
Query: 253 -FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF----ILCATICCCLPCIISVLGIREDY 307
GG + DAP+LY L IVFL F ++ +CCCLPCII++L D
Sbjct: 186 SAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD- 244
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVC 365
GA+ + IN L +KF++ + + + G + GT E ++S EDA C
Sbjct: 245 --QEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDAEC 302
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
CICL Y D ELREL C+H FH C+DKWL INA+CPLCK +I S+
Sbjct: 303 CICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDIIKSN 350
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 10/193 (5%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----P 283
+ H + A F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 35 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 94
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
I+ +CCCLPCII++L D GA+ + I +P YKF+ + +G +
Sbjct: 95 CIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSS 151
Query: 344 EGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+
Sbjct: 152 GGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINAT 211
Query: 402 CPLCKSEIGDSSS 414
CPLCK + +SS
Sbjct: 212 CPLCKFNVRKNSS 224
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 126/268 (47%), Gaps = 76/268 (28%)
Query: 21 MEQVHRHTDRDHIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSS 80
ME + + +HII+IT D + S SS DE+ + S TS +SSS+
Sbjct: 1 MESESDNDNDEHIIEITNDDGSLSGSSLDERSYSSLSSSVSTDDETSD-----EGASSST 55
Query: 81 NRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPL 140
RG G LW ++EL+VT+ QI+AS+VVL+++++E+ QA L
Sbjct: 56 -----------RGCG-----------SLWNTMELVVTLVQIVASLVVLTVAKDEHLQALL 93
Query: 141 FAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQA 200
W++GY GC+A +L ++ I S
Sbjct: 94 LTWVIGYTCGCIANTLVLLLSCVRKYNRIGVYSRT------------------------- 128
Query: 201 SDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPS 260
R++G++D KM ++CFF VW V+G +WI GHSSPS
Sbjct: 129 ------------------------RIDGVMDALKMGIECFFVVWLVLGILWICYGHSSPS 164
Query: 261 DAPKLYRLCIVFLTFSCIGYAMPFILCA 288
DAPKLYRLC+VF+ FSCI +A +LCA
Sbjct: 165 DAPKLYRLCVVFIAFSCIRFAYAVLLCA 192
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 362 DAVCCICLAKYVDDD--ELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
D CCICL KY +++ LR+L CSHVFH +C+DKWL+I +SCPLC+S++
Sbjct: 208 DDCCCICLGKYGEEEGVALRKLECSHVFHSECIDKWLRIKSSCPLCQSQV 257
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 107/193 (55%), Gaps = 10/193 (5%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----P 283
+ H + A F VW+++G W+ GG DAP+LY LCIVFL F
Sbjct: 9 IAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALA 68
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
I+ +CCCLPCII++L D GA+ + I +P YKF+ + G +
Sbjct: 69 CIIGIAVCCCLPCIIAILYAVSD---QEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSS 125
Query: 344 EGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G ++ GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+
Sbjct: 126 GGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINAT 185
Query: 402 CPLCKSEIGDSSS 414
CPLCK + +SS
Sbjct: 186 CPLCKYNVRKNSS 198
>gi|5002214|gb|AAD37364.1| unknown [Phacelia tanacetifolia]
Length = 74
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 101 RSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYW 160
RSPLNSGLWISVEL++TVSQI+A+IVVLSLSRNENP+APLFAW+VGYASGCVA LP+LYW
Sbjct: 1 RSPLNSGLWISVELVLTVSQIVAAIVVLSLSRNENPRAPLFAWVVGYASGCVAILPLLYW 60
Query: 161 RFRNRHQGIDSDST 174
R+R+R+QG + DS+
Sbjct: 61 RYRHRNQGSERDSS 74
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 103/188 (54%), Gaps = 10/188 (5%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----P 283
+ H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 54 IAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALA 113
Query: 284 FILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
I+ +CCCLPCII++L S GA+ + I +P YKF+ D +G
Sbjct: 114 CIIGIAVCCCLPCIIAILYA---VSDQEGASEDDIRQIPRYKFRRTDEPEKQTADETGPF 170
Query: 344 EGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
G + GT + E++++ EDA CCICL+ Y D ELREL C H FH C+DKWL INA+
Sbjct: 171 GGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINAT 230
Query: 402 CPLCKSEI 409
CPLCK I
Sbjct: 231 CPLCKFNI 238
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 36/306 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+++++ ++ ++ S V+L+ + ENP P+ WI GYA C+ + +++ +R R+
Sbjct: 63 VALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDA- 121
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
P S + + +D + + + + + LN +
Sbjct: 122 ----------------PGDEDSAANLDYDDVNDSDEDDVGTSGSSSSTGFTKRCASLNTM 165
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+ +W++VG W+ GG DAP+LY L +VFL F +L
Sbjct: 166 IS----------LLWWMVGFYWVVSGGDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLAC 215
Query: 289 TI----CCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I CCCLPCII++L + GA+ ++ LP Y+F+ N + G
Sbjct: 216 LIGIALCCCLPCIIAIL---YAVAGQEGASESDLSILPKYRFQMLSNEETPGEGGGGSMI 272
Query: 345 GGVLAAG-TEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
+ G + ER +S EDA CCIC++ Y D EL L C+H FH C+ KWLK+NA+CP
Sbjct: 273 PMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCP 332
Query: 404 LCKSEI 409
LCK I
Sbjct: 333 LCKYNI 338
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 125/284 (44%), Gaps = 46/284 (16%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E P PL W+ GY C+ + + ++ R + E S
Sbjct: 108 TERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCR-------------------EARSGG 148
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
+ + A D + S +V H + F +W+++G W+
Sbjct: 149 AGVDQDDAGDGDLKIS--------------------IVKHLESGNTMFSFIWWIIGFYWV 188
Query: 253 -FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----PFILCATICCCLPCIISVLGIREDY 307
GG + DAP+LY L IVFL F ++ +CCCLPCII++L D
Sbjct: 189 SAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQ 248
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVC 365
GA+ E IN L YKF++ + + G + GT E ++S EDA C
Sbjct: 249 VCQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVGGVMTECGTNPPVEHILSAEDAEC 308
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CICL Y D ELREL C+H FH C+DKWL INA+CPLCK I
Sbjct: 309 CICLCPYEDGTELRELPCNHHFHCTCIDKWLHINATCPLCKFNI 352
>gi|414885022|tpg|DAA61036.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 113
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
Query: 265 LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTY 324
+YRLC+ FL SC+GYA+PFI+CA ICCC PC+ISVL ++ED Q RGAT E I+ALPTY
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELIDALPTY 60
Query: 325 KFKSKKNGNLNDQDNSGGT---EGGVLAAGTEKERMISGEDAV 364
KFK K+ N S EGG+L GT+KER++S EDAV
Sbjct: 61 KFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAV 103
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 42/308 (13%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPIL---YWRFRNRH 166
++ +++ + ++AS V+L + E P P+ WI Y C+ + ++ YWR +
Sbjct: 78 VAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTR 137
Query: 167 QGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRL 226
+ D +S + I + D ++N +T + ++ +
Sbjct: 138 RARDLESYDHEDYN--------------IEYDYEQDSDDNSTTYSFVKRCES-------I 176
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLT----FSCIGYA 281
N ++ +W+++G W+ GG +AP LY L ++FL F+
Sbjct: 177 NTVISF----------IWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVV 226
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
+ ++ +CCCLPCII++L + T G + + LP YKFK+ + N
Sbjct: 227 LACLVGIALCCCLPCIIALL---YAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGK 283
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
+ ER + EDA CCICL+ Y D EL L C+H FH C+ KWLK+ A+
Sbjct: 284 MVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRAT 343
Query: 402 CPLCKSEI 409
CPLCK I
Sbjct: 344 CPLCKYNI 351
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 130/309 (42%), Gaps = 69/309 (22%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ +++I ++ + S+VVL + E P PL WI GYA C+ + + ++FR R
Sbjct: 76 VVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRRR---- 131
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
N D ++ E+ N
Sbjct: 132 ----------------------------NGNEDRHSSIVKRLESMNTM------------ 151
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFS------CIGYAM 282
F +VW+V G WI GG D+P+LY L +VFL F CIG A
Sbjct: 152 ----------FSSVWWVFGFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMAC 201
Query: 283 PFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG 342
F C L I + IRE GA+ + I LP Y+F D D
Sbjct: 202 IFFFALFCCIPLAAIAYAMKIRE------GASEDDIRLLPRYRFCDASLVRKVDDDKKQA 255
Query: 343 TEGGVL--AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
E V ++ + + + ED+ CCICL++YVD EL L C+H FH C+ +WL+INA
Sbjct: 256 LEAAVELGSSSSISDLALHPEDSECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINA 315
Query: 401 SCPLCKSEI 409
+CPLCK I
Sbjct: 316 TCPLCKFNI 324
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 112/215 (52%), Gaps = 18/215 (8%)
Query: 203 EENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSD 261
E R + + N ++L++ RL F VW++VG WI GG S D
Sbjct: 81 EYLRRQQQQQQANANSSLSWAKRLESANTMFSF-------VWWIVGFYWITAGGQSLAVD 133
Query: 262 APKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIISVLGIREDYSQTRGATAET 317
AP +Y LC+VFL F A+ ++ +CCCLPCII++L D GA+ E
Sbjct: 134 APHVYWLCVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVAD---QEGASEED 190
Query: 318 INALPTYKFK---SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVD 374
IN LP+ KF+ S G + + G V A+ ER + +DA CCICL+ Y D
Sbjct: 191 INNLPSAKFRKIYSDGKGKGDTERPLAGVMTFVGASANLTERSLFEDDAECCICLSSYED 250
Query: 375 DDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
ELR L CSH FH C+ KWL+INA+CPLCK I
Sbjct: 251 GVELRHLPCSHHFHSTCISKWLRINATCPLCKYNI 285
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 125/284 (44%), Gaps = 49/284 (17%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E P PL W+ GY C+ + + ++ R + E S
Sbjct: 108 TERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCR-------------------EARSGG 148
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
+ + A D + S +V H + F +W+++G W+
Sbjct: 149 AGVDQDDAGDGDLKIS--------------------IVKHLESGNTMFSFIWWIIGFYWV 188
Query: 253 -FGGHSSPSDAPKLYRLCIVFLTFSCIGYAM----PFILCATICCCLPCIISVLGIREDY 307
GG + DAP+LY L IVFL F ++ +CCCLPCII++L D
Sbjct: 189 SAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD- 247
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVC 365
GA+ E IN L YKF++ + + G + GT E ++S EDA C
Sbjct: 248 --QEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVGGVMTECGTNPPVEHILSAEDAEC 305
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CICL Y D ELREL C+H FH C+DKWL INA+CPLCK I
Sbjct: 306 CICLCPYEDGTELRELPCNHHFHCTCIDKWLHINATCPLCKFNI 349
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 107/204 (52%), Gaps = 10/204 (4%)
Query: 217 QNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTF 275
Q A G +V H + A F +W+++G WI GG + DAP+LY L IVFL F
Sbjct: 155 QGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAF 214
Query: 276 SCIGYAMPF----ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKN 331
++ +CCCLPCII++L D GA+ E IN L +KF++ +
Sbjct: 215 DVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD---QEGASEEDINNLSKFKFRTMGD 271
Query: 332 GNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHV 389
+ + G + GT E +S EDA CCICL Y D ELREL C+H FH
Sbjct: 272 ADKLVAGIAAPVGGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHC 331
Query: 390 DCVDKWLKINASCPLCKSEIGDSS 413
C+DKWL INA+CPLCK I S+
Sbjct: 332 TCIDKWLHINATCPLCKFNIIKSN 355
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 107/204 (52%), Gaps = 10/204 (4%)
Query: 217 QNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTF 275
Q A G +V H + A F +W+++G WI GG + DAP+LY L IVFL F
Sbjct: 155 QGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAF 214
Query: 276 SCIGYAMPF----ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKN 331
++ +CCCLPCII++L D GA+ E IN L +KF++ +
Sbjct: 215 DVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTD---QEGASEEDINNLSKFKFRTMGD 271
Query: 332 GNLNDQDNSGGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHV 389
+ + G + GT E +S EDA CCICL Y D ELREL C+H FH
Sbjct: 272 ADKLVAGIAAPVGGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHC 331
Query: 390 DCVDKWLKINASCPLCKSEIGDSS 413
C+DKWL INA+CPLCK I S+
Sbjct: 332 TCIDKWLHINATCPLCKFNIIKSN 355
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 100/182 (54%), Gaps = 17/182 (9%)
Query: 242 AVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFILCATICCCL 294
+VW+V G WI GG + D+P+LY L +VFL F CIG M ++ ++CCC+
Sbjct: 159 SVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIG--MACVIFFSLCCCI 216
Query: 295 PCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG--NLNDQDNSGGTEGGVLAAGT 352
P ++ + GA+ E I LP Y F+ G NL + G+ + +
Sbjct: 217 P----IVAFAYAMTTREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGSTVELDNSHR 272
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI--G 410
KE + ED+ CCICL++Y D EL L C+H FH C+ KWL+INA+CPLCKS I G
Sbjct: 273 IKELALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQG 332
Query: 411 DS 412
D+
Sbjct: 333 DT 334
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 56/298 (18%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
++P PL W+VGYA+ C+ + I++ R R + ++ +
Sbjct: 106 KDSPVKPLRLWLVGYAAQCLVHVGIVFTRLETRARHAWGPASDVE--------------- 150
Query: 193 TAISANQASDEENNRSTETETGNGQNA-LNFGGRLNGLVDHFKMALDCFFAVWFVVGNVW 251
SA +D S + ET G+++ + +N L+ +W+++G W
Sbjct: 151 ---SAGAGTDSSGTDSEDDETAEGRSSHASRCETINRLISF----------LWWIIGFYW 197
Query: 252 IF-GGHSSPSDAPKLYRLCIVFLTF----SCIGYAMPFILCATICCCLPCIISVLGIRED 306
+ GG AP+LY L IVFL F + AM + +CCCLPC++++L
Sbjct: 198 LVSGGEVLEYGAPRLYWLTIVFLAFDVFFAVFCVAMSCFIGIALCCCLPCVVAIL---YA 254
Query: 307 YSQTRGATAETINALPTYKF--------KSKKNGNLNDQDNSGGTEGGVLAAGTEKERMI 358
+ GA+ I+ LP Y++ + G + N+ G + ER++
Sbjct: 255 LAGKVGASDGDISVLPRYRYYDPSEDSEEETDEGLMIPILNNSGM--------STSERIL 306
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS---EIGDSS 413
EDA CC+CL+ Y D EL L C H FH C+ WL++NA+CPLCK EI DS+
Sbjct: 307 LREDAECCVCLSSYEDGAELSALPCRHHFHWSCITTWLRMNATCPLCKYNILEISDSA 364
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 143/303 (47%), Gaps = 41/303 (13%)
Query: 127 VLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPP 186
+L + E P P+ WI GYA C + +++ +R R++ D Q +Q P
Sbjct: 1 MLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQ-------P 53
Query: 187 EPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFV 246
+ + S N + DE+ N S G Q+++ + F +W++
Sbjct: 54 QHSDS----DVNDSEDEDGNSSASG--GFNQSSVTKRCESVNTMASF---------LWWI 98
Query: 247 VGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATI----CCCLPCIISVL 301
VG W+ GG + +AP+LY L +VFL F +L I CCCLPCII++L
Sbjct: 99 VGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 158
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTE-----KER 356
+ GA+ ++ LP Y+F++ N+++ SG G ++ T ER
Sbjct: 159 ---YAVAGQEGASEADLSMLPRYRFEA------NNEEKSGVGAGTMIPTETSSGYLANER 209
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
++ EDA CCICL Y D +L L C+ F C+ KWLK A+CPLCK +I S +
Sbjct: 210 ILLPEDAECCICLHSYEDGTKLPALPCNPHFPSTCISKWLKKKATCPLCKYKILKGSEQI 269
Query: 417 VQD 419
++
Sbjct: 270 LKK 272
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 105/177 (59%), Gaps = 10/177 (5%)
Query: 245 FVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGY----AMPFILCATICCCLPCIIS 299
+++G W+ GG + +P+LY LCIVFL F A+ ++ +CCCLPCII+
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--ERM 357
+L D GA+ E I+ L +KF+ + + D+ G + G + GT+ E +
Sbjct: 61 ILYAVTD---QEGASKEDIDQLAKFKFRRDGDIDKLTGDDQGCSGGIMTECGTDSPMEHV 117
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
+SGEDA CCICL+ Y D ELR+L C H FH CVDKWL INA+CPLCK +I S+S
Sbjct: 118 LSGEDAECCICLSAYEDGAELRQLPCGHHFHCTCVDKWLYINATCPLCKYDILKSTS 174
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 130/287 (45%), Gaps = 45/287 (15%)
Query: 134 ENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYT 193
E+P PL W+VGYA CV H + ++ R + P + + T
Sbjct: 109 ESPGKPLRLWLVGYALQCVV------------HVSLVCSGSRRRPAAPARGPDIESGAAT 156
Query: 194 AISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIF 253
A + + SDE N+ E + + +N +V W+++G W+
Sbjct: 157 AGANSSESDEGNDEEAMEERASSTDRCE---SVNTMVSFL----------WWIIGFYWVV 203
Query: 254 -GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFI----LCATICCCLPCIISVLGIREDYS 308
GG AP+LY L +VFL F + + +CCCLPC++++L
Sbjct: 204 TGGDVLEQGAPRLYWLTVVFLAFDVFFAVFCVVVACFIGVALCCCLPCVVAIL---YALV 260
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAGTEKERMISGED 362
GA+ I LP YK+ ++ GT+ GV+ + + ER++ ED
Sbjct: 261 GQEGASDADIGVLPRYKYSDPS------ENGEKGTDEGVMIPILNNSGTSTSERILLRED 314
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
A CCICL+ Y D EL L C+H FH C+ KWL+++A+CPLCK I
Sbjct: 315 AECCICLSSYEDGVELSALPCNHHFHSMCITKWLRMHANCPLCKYNI 361
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 187/402 (46%), Gaps = 76/402 (18%)
Query: 41 DASSSSSYDEQPH-RMASPQ-HEDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDG--- 95
+ +++S + E+P R SPQ + + S+G P+ S S+ R + ++ + R G
Sbjct: 2 EVAATSPWPEEPLLRPPSPQPNLRADAASSGDPA--SPPPSAVRPSRLAALIGRAAGRRG 59
Query: 96 ------------YGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAW 143
RRR +S +++++ V+ A+ VLS S E+P PL W
Sbjct: 60 PSMLVRETAALQLQRRRADWAHSRPVLALDIAWNVAFAAAAAAVLSSSAEESPVKPLRLW 119
Query: 144 IVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDE 203
+VGYA+ C+ H G+ T+ + S+ SA +D
Sbjct: 120 VVGYAAQCLV------------HVGLVCADTRRETRRAR------RSASDVESAGAGTDS 161
Query: 204 ENNRSTETETGNGQNALNFGGR---LNGLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSP 259
+ S + E G++ ++ GR +N L+ +W+++G WIF GG
Sbjct: 162 SDADSEDDERAEGRS--SYTGRCETMNTLISF----------LWWIIGFYWIFSGGEVLE 209
Query: 260 SDAPKLYRLCIVFLTFS------CIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGA 313
AP+LY L IVFL F C+ A FI A +CCCLPC+I++L + GA
Sbjct: 210 HGAPRLYWLTIVFLAFDVFFAVFCVAVAC-FIGIA-LCCCLPCVIAIL---YALAGQEGA 264
Query: 314 TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAGTEKERMISGEDAVCCI 367
+ I+ L Y++ +D G + G++ + + ER++ EDA CCI
Sbjct: 265 SDADISVLLRYRYSDPS------EDGEKGVDEGLMIPILNNSGMSTSERILLREDAECCI 318
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CL+ Y D EL L C+H FH C+ KWL++NA+CPLCK I
Sbjct: 319 CLSSYEDGAELSALPCNHHFHWPCITKWLRMNATCPLCKYNI 360
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 51/290 (17%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
E+P PL W+VGYA+ C+ + ++ R + ++ + + SS
Sbjct: 108 EESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRARGSASDVESAGA-----GTDSSD 162
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
++ ++ ++R++ ET +N L+ +W+++G W+
Sbjct: 163 ADSEDDERAEGRSSRTSRCET------------MNTLISF----------LWWIIGFYWL 200
Query: 253 F-GGHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFILCATICCCLPCIISVLGIRE 305
GG AP+LY L +VFL F C+ A FI A +CCCLPC+I++L
Sbjct: 201 VSGGEVLEYGAPRLYWLTVVFLAFDVFFAVFCVAVAC-FIGIA-LCCCLPCVIAIL---Y 255
Query: 306 DYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAGTEKERMIS 359
+ GA+ I+ LP Y+F +D GT+ G++ + + ER++
Sbjct: 256 ALAGQEGASDADISVLPRYRFSDPS------EDGEKGTDEGLMIPILNNSGVSTSERILL 309
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EDA CC+CL+ Y D EL L C+H FH C+ KWL++NA+CPLCK I
Sbjct: 310 REDAECCVCLSSYEDGAELSALPCNHHFHWTCITKWLRMNATCPLCKYNI 359
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 17/182 (9%)
Query: 242 AVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFILCATICCCL 294
+VW+V G WI GG + D+P+LY L +VFL F CIG M + ++CCC+
Sbjct: 87 SVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIG--MACVXFFSLCCCI 144
Query: 295 PCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG--NLNDQDNSGGTEGGVLAAGT 352
P ++ + GA+ E I LP Y F+ G NL + G+ + +
Sbjct: 145 P----IVAFAYAMTTREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGSTVELDNSHR 200
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI--G 410
KE + ED+ CCICL++Y D EL L C+H FH C+ KWL+INA+CPLCKS I G
Sbjct: 201 IKELALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQG 260
Query: 411 DS 412
D+
Sbjct: 261 DT 262
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 119/294 (40%), Gaps = 69/294 (23%)
Query: 125 IVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPT 184
+VVL + E P PL WI GYA C+ + + ++FR R
Sbjct: 1 MVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRRR------------------- 41
Query: 185 PPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVW 244
N D ++ E+ N F +VW
Sbjct: 42 -------------NGNEDRHSSIVKRLESMNTM----------------------FSSVW 66
Query: 245 FVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFILCATICCCLPCI 297
+V G WI GG D+P+LY L +VFL F CIG A F C L I
Sbjct: 67 WVFGFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIPLAAI 126
Query: 298 ISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK--E 355
+ IRE GA+ + I LP Y+F D D E V + +
Sbjct: 127 AYAMKIRE------GASEDDIRLLPRYRFCDASLVRKVDDDKKQALEAAVELGSSSSISD 180
Query: 356 RMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ ED+ CCICL++YVD EL L C+H FH C+ +WL+INA+CPLCK I
Sbjct: 181 LALHPEDSECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINATCPLCKFNI 234
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 44/287 (15%)
Query: 134 ENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYT 193
E+P PL W+VGYA CV + ++ R + + + ++ P S
Sbjct: 107 ESPAKPLRLWLVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESDAANAGPD--GSGSE 164
Query: 194 AISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIF 253
+A DE ++ E+ +N LV W+++G W+
Sbjct: 165 DDDDEEAMDERSSSVERCES------------VNTLVSFL----------WWIIGFYWVV 202
Query: 254 -GGHSSPSDAPKLYRLCIVFLTF----SCIGYAMPFILCATICCCLPCIISVLGIREDYS 308
GG AP+LY L +VFL F + A+ + +CCCLPC++++L
Sbjct: 203 SGGDMLEQGAPRLYWLTVVFLAFDVFFAVFCVAVACFIGVALCCCLPCVVAIL---YALV 259
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAGTEKERMISGED 362
GA+ I LP YK+ ++ ++D GT+ G++ + + ER++ ED
Sbjct: 260 GQEGASDADIGVLPRYKY------SVANEDVEKGTDEGLMIPILNNSGASTSERILLNED 313
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
A CCICL+ Y D EL L C+H FH C+ KWL+++A+CPLCK I
Sbjct: 314 AECCICLSSYEDGVELSALPCNHHFHSTCITKWLRMHATCPLCKFNI 360
>gi|224056495|ref|XP_002298884.1| predicted protein [Populus trichocarpa]
gi|222846142|gb|EEE83689.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 17/176 (9%)
Query: 234 KMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICC 292
+ +L+ FFA+WFV+GNVW+F S APKL+ LCI L ++ + Y+ PF+L +CC
Sbjct: 5 RTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCC 64
Query: 293 CLPCIISVLGIREDY-SQTRGATAETINALPTYKFKSK-KNGNLNDQDNSGGTEGGVLAA 350
C+P I +VLG + S RGA+ + I++LP++++K+ N + + T
Sbjct: 65 CVPLISTVLGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNST------- 117
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
I+ ED CCICLAKY D +E+R+L CSH+FH+ CVD+WL+I + CPLCK
Sbjct: 118 -------IASEDLECCICLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCK 166
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 154/374 (41%), Gaps = 59/374 (15%)
Query: 61 EDIPSTSTGVPSYHSSSSSSNRLNNRSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQ 120
E + ++ + SSS + RL + S +R + R +R L +G ++V L+ S+
Sbjct: 37 ESLLRNASRAHHHRRSSSQAVRLLRQESTRVRNNVVDRFQRDLLPAGRLLTVLLVT--SE 94
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRN----RHQGIDSDSTQL 176
+ A ++VL S N++ PL WI CV L+ N R+ + + L
Sbjct: 95 LTAELLVLIFSWNKSCDRPLHFWI------CVLIFIQLFSLVLNLVGSRYSRVFASLESL 148
Query: 177 RQGSSLPTPPEPTSSYTAISANQASDEEN----------NRSTETETGNGQNALNFGGRL 226
Q E T T S+ EN N +
Sbjct: 149 SQ-------EEGTRHETGSSSGVFFRAENIYRGFPSGSSEIEETESLEESGNTIFESMYH 201
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFIL 286
N LV + L+ F+ VWF+VG++W+ + AP LYRL + + +P
Sbjct: 202 NELVSRWLRLLNAFYLVWFIVGSIWLSECETCNKTAPHLYRLVLALIVIYYALLGLPLAC 261
Query: 287 CATICCCLPCIISVLGIREDYSQTR---GATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
I CCLP I +L + +Q R ATAE IN LP +
Sbjct: 262 FCLIMCCLPLFIRLLLPYAESTQRRRGRAATAEQINNLPCSSY----------------- 304
Query: 344 EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
+ E+E ED C ICL Y+D D +R L C H +H C+D+WL ++ SCP
Sbjct: 305 ----VHGSFERE-----EDTSCVICLTDYIDGDMIRHLPCKHHYHKKCIDEWLALDKSCP 355
Query: 404 LCKSEIGDSSSPLV 417
LCK +I DS +V
Sbjct: 356 LCKKDI-DSREEIV 368
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 88/160 (55%), Gaps = 21/160 (13%)
Query: 267 RLCIVFLTFSCIGYAMPFILCA----TICCCLPCIISVLGIREDYSQTRGATAETINALP 322
RLCIVFL F + + +CCCLPCII++L D GAT E I LP
Sbjct: 185 RLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQE---GATKEEIERLP 241
Query: 323 TYKFK-----SKKNGNLNDQDNSGGTEGGVLA---AGTEKERMISGEDAVCCICLAKYVD 374
YKF+ K NG + + + GG++ T E +I EDA CCICL+ Y D
Sbjct: 242 KYKFRRIGESEKLNGEIQE------SFGGIMTECDTDTPMEHVIPQEDAECCICLSAYED 295
Query: 375 DDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
+ ELREL C H FH C+DKWL INA+CPLCK I ++S
Sbjct: 296 ETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKNAS 335
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 78 SSSNRLNNRSSFMMR---GDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNE 134
+SS R+ S +R + R+ S + ++++ ++ ++ ++ VL +SR+E
Sbjct: 48 ASSRRIMREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDE 107
Query: 135 NPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQ 175
P PL WI+GY CV + + ++ R S + +
Sbjct: 108 TPSTPLRLWIIGYGLQCVLHMVCICVEYKRRRHLASSGAVE 148
>gi|147815563|emb|CAN70534.1| hypothetical protein VITISV_010222 [Vitis vinifera]
Length = 244
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 87/146 (59%), Gaps = 15/146 (10%)
Query: 267 RLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATA--ETINALPTY 324
RL L C YAMP I A+ C +I L + + + RG + N LPTY
Sbjct: 101 RLFKALLLSGCTIYAMPGIAIASYCLFFSWLILSLLLLKLREKHRGTSTPDSPPNVLPTY 160
Query: 325 KFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM-ISGEDAVCCICLAKYVDDDELREL-I 382
KFKSK+NG G +LAAGT+K+ +SGED VCCICL Y D++ELREL
Sbjct: 161 KFKSKENGG-----------GVLLAAGTKKKSASLSGEDVVCCICLGNYADNEELRELPC 209
Query: 383 CSHVFHVDCVDKWLKINASCPLCKSE 408
CSH FHV+CVDKWLKI A CPLC+SE
Sbjct: 210 CSHFFHVECVDKWLKIKARCPLCQSE 235
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 108 LWISVELIVTVSQIIASIVVLSLSRN-ENPQAPLFAWIVGYASGCVATLPILYWRFRN 164
++S+ + V QI+AS+V LS+S+ E+P +FAW+VGYA C LP LY+R RN
Sbjct: 37 FFLSIMIYANVIQIVASVVGLSVSKALEHPANKIFAWVVGYAFACAVMLPFLYYRLRN 94
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 243 VWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATI----CCCLPCI 297
+W++VG W+ GG + +AP+LY L +VFL F +L I CCCLPCI
Sbjct: 122 LWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 181
Query: 298 ISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAG-TEKER 356
I++L + GA+ ++ LP YK+ N + +G ++G ER
Sbjct: 182 IAIL---YAVAGQEGASEADLSILPKYKYLVMGNEEKRPRVGAGKMVPVETSSGYLSTER 238
Query: 357 MISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
++ EDA CCICL+ Y D EL L C+H FH C+ KWLK+NA+CPLCK I
Sbjct: 239 VLLPEDAECCICLSPYEDGAELHALPCNHHFHAMCIVKWLKMNATCPLCKYNI 291
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 20/178 (11%)
Query: 243 VWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLT----FSCIGYAMPFILCATICCCLPCI 297
+W+++G W+ GG DAP+LY L +VFL F+ AM + +CCCLPC+
Sbjct: 5 LWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCV 64
Query: 298 ISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAG 351
I++L + GA+ I LP Y++ +D GT+ GV+ +
Sbjct: 65 IAIL---YALAGQEGASDADIGFLPRYRYSDPS------EDGQKGTDEGVMIPVLNNSGT 115
Query: 352 TEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ ER++ EDA CCICL+ Y D EL L C+H FH C+ KWL+++A+CPLCK I
Sbjct: 116 STSERILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNI 173
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
+ ++++ ++ ++A+ VL + E P PL W+ GYA CV + +Y+ FR R +
Sbjct: 70 LVLDMVWNLAFVVAAAGVLLSTLRERPATPLRLWLCGYAFECVLHMAFVYFEFRTRIRDS 129
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S +T S+ EP ++ +
Sbjct: 130 FSHTTY-----SIVKKLEPMNTLAS----------------------------------- 149
Query: 230 VDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCA 288
+VW+V G WI GG + D+P LY L +VFL F I C
Sbjct: 150 ------------SVWWVFGFYWIVVGGQALLEDSPHLYWLTVVFLAFD----VFFIIFCI 193
Query: 289 TICC----CLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
+ C L CII ++ + GA+ E I +LP Y+F + + D + +
Sbjct: 194 GMACIVFFALFCIIPIIALAYAMRIREGASEEDIRSLPMYRFSLSNSLVMVDDNKKQLVK 253
Query: 345 GGV--LAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
V E + +D+ CCICL YV+ +EL L C+H FH C+ +WL+ A+C
Sbjct: 254 VRVDSCNGSHMSELSLHPDDSECCICLCPYVEGEELYRLPCTHHFHCGCISRWLRTKATC 313
Query: 403 PLCKSEI--GDS 412
PLCK I GD+
Sbjct: 314 PLCKFNILRGDT 325
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 150/345 (43%), Gaps = 67/345 (19%)
Query: 98 RRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPI 157
RRR +S +++++ V+ A+ VL S E+P PL W+VGYA C+ + +
Sbjct: 5 RRRADWAHSRPVVALDIAWNVAFAAAAAAVLVASTEESPVTPLRLWLVGYALQCLVHVGL 64
Query: 158 LYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQ 217
+ R R S + G + T S + ++ ++ ++ + E+ N
Sbjct: 65 VCSDSRRRPAHARSSDVESADGDAAGAG---TDSSDSDDDDEGREQRSSFAKRCESINTM 121
Query: 218 NALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIF-GGHSSPSDAPKLYRLC------- 269
+ +W+++G W+ GG DAP+LY C
Sbjct: 122 VSF----------------------LWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKPVPI 159
Query: 270 ---------------IVFLTF----SCIGYAMPFILCATICCCLPCIISVLGIREDYSQT 310
+VFL F + AM + +CCCLPC+I++L +
Sbjct: 160 TDYFMIVQSNVHMLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL---YALAGQ 216
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAGTEKERMISGEDAV 364
GA+ I LP Y++ +D GT+ GV+ + + ER++ EDA
Sbjct: 217 EGASDADIGFLPRYRYSDPS------EDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAE 270
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CCICL+ Y D EL L C+H FH C+ KWL+++A+CPLCK I
Sbjct: 271 CCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNI 315
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 131/301 (43%), Gaps = 66/301 (21%)
Query: 121 IIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGS 180
++A+ V+LS R E P PL W+ GYA CV + +Y+ FR T +R
Sbjct: 80 VVAAGVLLSTLR-ERPSTPLRLWLCGYAFECVLHMAFVYFEFR----------TGIRD-- 126
Query: 181 SLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCF 240
+ S+TA S + + N ++
Sbjct: 127 --------SFSHTAYSIVKKLEPMNTLAS------------------------------- 147
Query: 241 FAVWFVVGNVWIF-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICC----CLP 295
+VW++ G WI G + D+P+LY L +VFL F I C + C L
Sbjct: 148 -SVWWIFGFYWIVVGDQALLEDSPRLYWLTVVFLAFD----VFFIIFCIGMACIVFFALF 202
Query: 296 CIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKE 355
CII ++ + GA+ E I +LP Y+F + + D + +G V +
Sbjct: 203 CIIPIIALAYAMRIREGASEEDILSLPMYRFSQSNSLVMVDDNKKQLIKGRVDSCNGSHM 262
Query: 356 RMIS--GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI--GD 411
+S +D+ CCICL YV+ EL L C+H FH +C+ +WL+ A+CPLCK I GD
Sbjct: 263 SALSLHPDDSECCICLCPYVEGAELYRLPCTHHFHCECIGRWLQTKATCPLCKFNILRGD 322
Query: 412 S 412
+
Sbjct: 323 T 323
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 32/188 (17%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWIFGG-HSSPSDAPK--LYRLCIVFLTFS----CIGYA 281
+V + + +LD +WFVVGN+W+ GG S ++A K +Y +V L C+
Sbjct: 154 MVTNARNSLDALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQICLPCI 213
Query: 282 MPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
+ C CLPC+I +L D RGAT + LPT +
Sbjct: 214 FAIAMVPVFCFCLPCVIRLLASLHDPVAGRGATKRDLARLPTVPY--------------- 258
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
+E ++ GED C +C++ Y D+LR L C H+FHVDCVD+WL +NA+
Sbjct: 259 ----------SENMELLKGEDPCCSVCISDYEKGDKLRVLPCKHLFHVDCVDQWLSVNAT 308
Query: 402 CPLCKSEI 409
CPLC+ I
Sbjct: 309 CPLCRKSI 316
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ +S I + VVL LSRNEN PL W+ GYA C+ + + +R R
Sbjct: 83 VALDLLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQ- 141
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
R G +P E S ++ S+++ + E R +T+ + L
Sbjct: 142 -------RGGGPVPADEERGSDVSSSSSDEDASENQLRGRDTDYVS-------------L 181
Query: 230 VDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF---- 284
H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 182 AKHLESANTMFSFIWWIIGFYWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALAC 241
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
I+ +CCCLPCII++L S GA+ + I +P YKF+ + D + +
Sbjct: 242 IIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPKYKFRRVDEPEKDSADATESSG 298
Query: 345 GGVLAAGTEK--ERMISGEDAVCCICLA 370
G + GT + E+ ++ EDA CCIC++
Sbjct: 299 GIMTECGTNQPIEKALAAEDAECCICIS 326
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 19/159 (11%)
Query: 261 DAPKLYRLCIVFLTF----SCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAE 316
DAP+LY L +VFL F + AM + +CCCLPC+I++L + GA+
Sbjct: 1 DAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL---YALAGQEGASDA 57
Query: 317 TINALPTYKFKSKKNGNLNDQDNSGGTEGGVL------AAGTEKERMISGEDAVCCICLA 370
I LP Y++ +D GT+ GV+ + + ER++ EDA CCICL+
Sbjct: 58 DIGFLPRYRYSDPS------EDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECCICLS 111
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
Y D EL L C+H FH C+ KWL+++A+CPLCK I
Sbjct: 112 SYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNI 150
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 112/284 (39%), Gaps = 63/284 (22%)
Query: 133 NENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSY 192
NE P PL W+ GYA C+ + ++ FR + S+
Sbjct: 63 NERPSTPLRLWLCGYAFECLLHVAFVFSEFR--------------------VTTRDSFSH 102
Query: 193 TAISANQASDEENNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWI 252
T S + + N ++ +VW+V G WI
Sbjct: 103 TPYSIAKKLEPMNTLAS--------------------------------SVWWVFGFYWI 130
Query: 253 F-GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICC----CLPCIISVLGIREDY 307
GG D+P+LY L +VFL F I C + C L CII ++ +
Sbjct: 131 VVGGQPLLEDSPRLYWLTVVFLAFD----VFFIIFCIGMACIVFFALFCIIPIIALAYAL 186
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEG--GVLAAGTEKERMISGEDAVC 365
GA+ + I++LP Y+F + D + + G E + +D+ C
Sbjct: 187 RIREGASEDDISSLPMYRFSQSNVMVMVDDNKKQHVKAKIGSYNPSHISELSLHPDDSEC 246
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CICL YVD EL L C+H FH C+ +WL+ A+CPLCK I
Sbjct: 247 CICLCPYVDGTELYRLPCTHHFHCACISRWLRTKATCPLCKYNI 290
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 38/228 (16%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+ ELI + Q+ L++S+ E P P+ WI GY GC+ L +LY R
Sbjct: 84 NPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGR 143
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
+R + QG+ D E + ET
Sbjct: 144 YRQ---------LDINQGNGFVL----------------GDVEQQQRGREET-------- 170
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
R + L++ + +L+ FFA+WFV+GNVW+F S APKL+ LC+ L ++ I Y
Sbjct: 171 ---RSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICY 227
Query: 281 AMPFILCATICCCLPCIISVLGIREDY-SQTRGATAETINALPTYKFK 327
+ PF+L +CC +P I S+LG + S R A+ + I++LP++KFK
Sbjct: 228 SFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFK 275
>gi|444436429|gb|AGE09582.1| C3HC4Z1-like protein, partial [Eucalyptus cladocalyx]
Length = 137
Score = 104 bits (260), Expect = 8e-20, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 14/148 (9%)
Query: 263 PKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINAL 321
PKL+ LCI L ++ + Y+ PF+L +CC +P + + LG + + RGA+ + I+ L
Sbjct: 1 PKLHMLCISLLAWNAVSYSFPFLLFLLLCCFVPLMSTFLGYNMNVASVERGASDDQISRL 60
Query: 322 PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL 381
P++K+K N NL D+S +++ ED CCICL+KY + +E+R+L
Sbjct: 61 PSWKYKQVDN-NLGLGDDS------------NHNLVLANEDKECCICLSKYKEREEVRQL 107
Query: 382 ICSHVFHVDCVDKWLKINASCPLCKSEI 409
CSH+FH CVD+WL+I + CPLCK E+
Sbjct: 108 PCSHMFHQKCVDQWLRITSCCPLCKKEL 135
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 44/253 (17%)
Query: 102 SPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWR 161
+P NS W+++EL V V+Q++ + V++ S E P PL W+ Y G V +LP+LYWR
Sbjct: 178 NPFNSPGWLALELGVIVAQVVLTTAVVATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWR 237
Query: 162 FRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALN 221
R+ + + + + A+D NRS
Sbjct: 238 HRHSSSSSSAGGGR-----------------GDLEMHGANDAPGNRSY------------ 268
Query: 222 FGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH-SSPSDAPKLYRLCIVFLTFSCIGY 280
L++ + L+ FFA+WFV+GNVW+F S AP+LY LC+ L ++ + Y
Sbjct: 269 -------LMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLYALCVSLLAWNAVVY 321
Query: 281 AMPFILCATICCCLPCIISVLGIREDYSQT-RGATAETINALPTYKFKSK---KNGNLND 336
++PF+L +CC +P + LG + + RGA+ E + ALP ++FK ++ +D
Sbjct: 322 SLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPRWRFKEPDVARDRERDD 381
Query: 337 QD---NSGGTEGG 346
QD + GG GG
Sbjct: 382 QDILSSRGGPTGG 394
>gi|281210989|gb|EFA85155.1| hypothetical protein PPL_02155 [Polysphondylium pallidum PN500]
Length = 548
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 42/192 (21%)
Query: 228 GLVDHFKMALDCFFAVWFVVGNVWIFGGHSS---PSDAPKLYRLCIVFLTFSCIGYAMPF 284
++ + L + +WF+VG + F SS PS AP L+ + + I ++ F
Sbjct: 311 NIIPYLARILSSSYVIWFIVGVILTFKAKSSDQCPSSAPYLFWVIYSVVIIQIIICSLGF 370
Query: 285 ILCATICCCLPCIISVLGIREDYSQT-------RGATAETINALPTYKFKSKKNGNLNDQ 337
I C C C+ S+L + ++ T RGAT I L K+K
Sbjct: 371 IFC-----CCSCVFSLLRLGLNFEATDRAASVSRGATDSMIRKLSIKKYKV--------- 416
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK 397
G+LA +D C ICL++Y++DD++R L C+H +H+DC+D+WL
Sbjct: 417 --------GLLAK----------DDTSCAICLSEYIEDDKIRILPCNHHYHLDCIDRWLI 458
Query: 398 INASCPLCKSEI 409
I+ SCP CK +I
Sbjct: 459 IDKSCPFCKRDI 470
>gi|348669639|gb|EGZ09461.1| hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]
Length = 321
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCAT 289
+ K LD WF+VGN+W+ + D +Y+L + + I YA F+ C
Sbjct: 143 LSQLKYGLDLAGLFWFLVGNMWVISDGARCDDGSAMYQLALWMIV---ISYAKIFLPCLL 199
Query: 290 ICC-------CLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG 342
+ CLPC+I +L +D + +GAT E I+ L T + +
Sbjct: 200 LLALLPVLCFCLPCVIRLLSRLQDPMRGKGATKEIIDRLETKTYSAN------------- 246
Query: 343 TEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
M EDA CCICL Y LR L C H FH DCVD+WL +N++C
Sbjct: 247 --------------MFPPEDACCCICLNDYEPSQSLRVLPCEHHFHKDCVDEWLLVNSTC 292
Query: 403 PLCKSEIGDSS 413
P C+ I D +
Sbjct: 293 PTCRKSIFDPA 303
>gi|186478525|ref|NP_173012.2| uncharacterized protein [Arabidopsis thaliana]
gi|334182600|ref|NP_001185004.1| uncharacterized protein [Arabidopsis thaliana]
gi|98961653|gb|ABF59156.1| hypothetical protein At1g15590 [Arabidopsis thaliana]
gi|332191217|gb|AEE29338.1| uncharacterized protein [Arabidopsis thaliana]
gi|332191218|gb|AEE29339.1| uncharacterized protein [Arabidopsis thaliana]
Length = 179
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 106/245 (43%), Gaps = 79/245 (32%)
Query: 27 HTDRD-HIIDITTTDDASSSSSYDEQPHRMASPQHEDIPSTSTGVPSYHSSSSSSNRLNN 85
H+D D HIIDIT +D+SS SS DE+ + P ST +SSS+ +
Sbjct: 6 HSDNDDHIIDITNDEDSSSRSSLDERSY----PSLSSSLSTDDESSDEGASSSTRD---- 57
Query: 86 RSSFMMRGDGYGRRRRSPLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIV 145
LW +EL+VT+ QI+AS++VL+L+++E+ QA L W++
Sbjct: 58 -------------------CGSLWNIMELVVTLVQIVASLIVLTLAKDEHQQALLLTWVI 98
Query: 146 GYASGCVA-TLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEE 204
GY GC+ TL IL R Y I
Sbjct: 99 GYTCGCITITLLILLSCVRK---------------------------YNRIGVY------ 125
Query: 205 NNRSTETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPK 264
++T T +AL KM +CFF VW V+G +WI GHSS SD PK
Sbjct: 126 ----SKTRTDRVMDAL-------------KMGNECFFVVWLVMGILWICYGHSSSSDTPK 168
Query: 265 LYRLC 269
LYR C
Sbjct: 169 LYRFC 173
>gi|449017510|dbj|BAM80912.1| ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 365
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 237 LDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPC 296
L + W ++G++W+ + P AP L+R+C++ + +P +L I CCLP
Sbjct: 183 LHALYLGWIILGSIWLSESRTCPGTAPLLFRICVILVLVYFAFLMLPLVLITLIICCLPL 242
Query: 297 IISVLGIREDYS-----QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAG 351
I L +Y+ Q R A E + LP +F + + + +++
Sbjct: 243 FIRFL---VNYAERLRRQERAAAPEIVEQLPVVQFDASQCEDFGFEEDGA---------- 289
Query: 352 TEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIG 410
+C ICL++Y +E+R+L C H FH CVD+WL + SCP C+S++
Sbjct: 290 -----------PICTICLSQYEPAEEIRKLPCGHHFHRACVDQWLLFFDKSCPQCRSDVD 338
Query: 411 DSSS 414
S +
Sbjct: 339 ASQT 342
>gi|301111063|ref|XP_002904611.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262095928|gb|EEY53980.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 37/191 (19%)
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCAT 289
+ K LD WF+VGN+W+ + D +Y+L + + I YA F+ C
Sbjct: 143 LSQLKYGLDLAGLFWFLVGNMWVISDGARCDDGSAMYQLALWMIV---ISYAKIFLPCLL 199
Query: 290 ICC-------CLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGG 342
+ CLPC+I +L +D + +GAT E I+ L + + +
Sbjct: 200 LLALLPILCFCLPCVIRLLSRLQDPMRGKGATKEMIDQLESKTYTAN------------- 246
Query: 343 TEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
M EDA CCICL Y LR L C+H FH +CVD+WL +N++C
Sbjct: 247 --------------MFPPEDACCCICLNDYEASQSLRVLPCAHHFHKECVDEWLLVNSTC 292
Query: 403 PLCKSEIGDSS 413
P C+ I D++
Sbjct: 293 PTCRKSIFDTA 303
>gi|414885021|tpg|DAA61035.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 80
Score = 94.7 bits (234), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
VCCICL KY DDDELREL C+H FHV CVDKWLKINA CPLCK+EIG
Sbjct: 3 VCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEIG 49
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 289 TICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL 348
+CCCLPC+I++L + GA+ I LP Y++ +D GT+ GV+
Sbjct: 8 ALCCCLPCVIAIL---YALAGQEGASDADIGFLPRYRYSDPS------EDGQKGTDEGVM 58
Query: 349 ------AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASC 402
+ + ER++ EDA CCICL+ Y D EL L C+H FH C+ KWL+++A+C
Sbjct: 59 IPVLNNSGTSTSERILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATC 118
Query: 403 PLCKSEI 409
PLCK I
Sbjct: 119 PLCKYNI 125
>gi|357466367|ref|XP_003603468.1| RING finger protein [Medicago truncatula]
gi|355492516|gb|AES73719.1| RING finger protein [Medicago truncatula]
Length = 81
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS-SSPLVQDSAQ 422
VCCIC+A Y +DDELREL CSH+FH +CVDKWLKINA CPLCKSEIG++ + P+++++A
Sbjct: 5 VCCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEIGENVTEPVIEENAN 64
Query: 423 H 423
Sbjct: 65 Q 65
>gi|422293880|gb|EKU21180.1| hypothetical protein NGA_0133600 [Nannochloropsis gaditana CCMP526]
Length = 409
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 28/174 (16%)
Query: 225 RLNGLVDHFKMALDCFFAVWFVVGNVWIFGGH----SSPSDAPKLYRLCIVFLTFS---- 276
RL + H + LD F +WFVVGN+W+FGG P+ +P +Y LC+ F+ +
Sbjct: 99 RLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSP-VYSLCVAFVFINYAQL 157
Query: 277 CIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFK--------S 328
C+ + I+ +C CLPC+I +L +D + +GAT IN LP K++ +
Sbjct: 158 CLPCVVVIIMLPVLCFCLPCLIRILARIQDPMRGKGATPSMINKLPMMKYRQIQAEKAAT 217
Query: 329 KKNGNLNDQDNSGGTEGGVLAAGTEKERMIS-----GEDAVCCICLAKYVDDDE 377
G+L Q ++GG E++ +S C +C+++Y D++
Sbjct: 218 ASAGSLEGQAAPPASQGG------EQDTQVSVTGVESNSTSCAVCISEYAPDED 265
>gi|325182411|emb|CCA16864.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 342
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 87/209 (41%), Gaps = 58/209 (27%)
Query: 234 KMALDCFFAVWFVVGNVWIF----GGHSSPS--------DA---------PKLYRLCIVF 272
K LD WF+VGN+W+ H P+ DA P LY L
Sbjct: 144 KYGLDLLGVFWFLVGNMWVISDDDAQHGKPATGSGEKLEDAAPLTPSHCDPSLYHLAFWM 203
Query: 273 LTFSCIGYAMPFILCATICC-------CLPCIISVLGIREDYSQTRGATAETINALPTYK 325
+ I Y F+ C + CLPC+I VL +D + +GA+ E I L
Sbjct: 204 IV---ITYVKIFLPCILLLILLPVICFCLPCLIRVLSRFQDPMRGKGASQEIIARLTCTN 260
Query: 326 FKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSH 385
+K M + +D CCICL YV+D+ELR L C H
Sbjct: 261 YKKD---------------------------MFAQDDCNCCICLNAYVEDEELRLLPCRH 293
Query: 386 VFHVDCVDKWLKINASCPLCKSEIGDSSS 414
FH C D+WL +NA+CP C+ I ++ S
Sbjct: 294 HFHKQCADEWLVVNATCPTCRLSIYETPS 322
>gi|328868397|gb|EGG16775.1| transmembrane protein [Dictyostelium fasciculatum]
Length = 826
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 51/217 (23%)
Query: 211 TETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSS---PSDAPKLYR 267
T+ NGQ + R+ + + L C + WF+VG V F + S AP L+
Sbjct: 308 TQDDNGQPSPEVA-RVQLIFRNLHNVLSCSWITWFIVGIVCTFKARAHDTCTSSAPYLF- 365
Query: 268 LCIVFLTFSCIGYAMPFILCATICCCLPCIISV--LGIREDYSQ-------------TRG 312
++++S + + + A + CC CI S+ LG+ + Q +RG
Sbjct: 366 ----WVSYSVVIFQIVIASLAMLFCCCSCIFSLMRLGVHIEMVQAAGGGGAAGGMGDSRG 421
Query: 313 ATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKY 372
AT + L T KFK+ GVL +D C ICL Y
Sbjct: 422 ATDTMLRKLSTKKFKT-----------------GVLP----------NDDCSCAICLTDY 454
Query: 373 VDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
VD +++R L C H +H++C+D+WL N SCP CK +I
Sbjct: 455 VDGEKIRILPCKHHYHLNCIDRWLIQNKSCPFCKRDI 491
>gi|298711234|emb|CBJ32454.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 28/123 (22%)
Query: 285 ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTE 344
+L +C CLPC+I ++G+ + + +GA + I LP K++
Sbjct: 2 LLVPVLCFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPVVKYR----------------- 44
Query: 345 GGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPL 404
E + M ED C ICL +Y +DELR+L C H FH CVD WL +NASCP
Sbjct: 45 --------EVQDM---EDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPN 93
Query: 405 CKS 407
C++
Sbjct: 94 CRA 96
>gi|147815562|emb|CAN70533.1| hypothetical protein VITISV_010221 [Vitis vinifera]
Length = 240
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 110/285 (38%), Gaps = 102/285 (35%)
Query: 109 WISVELIVTVSQIIASIVVLSLS-RNENPQAPLFAWIVGYASG--CVATLPILYWRFRNR 165
+I + +++V Q++AS+V L +S E+P L +W+VGYASG + P+LY+R R
Sbjct: 40 FIHILFVLSVIQVVASLVGLWVSIVYEHPDYELISWVVGYASGFAVIVIFPLLYFRCR-- 97
Query: 166 HQGIDSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGR 225
+ N R + TG
Sbjct: 98 ----------------------------------ITSTLNLRQRKVMTG----------- 112
Query: 226 LNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFI 285
F + + FF VW+ +G + GG SS AP+L
Sbjct: 113 -------FWITMSFFFLVWYGLGIAFFAGGSSSNHGAPRL-------------------- 145
Query: 286 LCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEG 345
+T+ E + +P + + G EG
Sbjct: 146 -----------------------ETKN-LEEPVPQIPLVHCLPASLNQIKESGGRSGDEG 181
Query: 346 G-VLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHV 389
G VLAAGTEKER +SGE+ VCCICL K+ D+DE+RE +C +V
Sbjct: 182 GIVLAAGTEKERTLSGEEVVCCICLRKFADNDEVREWVCEDYRYV 226
>gi|414884510|tpg|DAA60524.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 93
Score = 82.0 bits (201), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 345 GGVLA-AGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
GGV+ GT E ++S EDA CCICL Y D ELREL C+H FH C+DKWL INA+
Sbjct: 16 GGVMTECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINAT 75
Query: 402 CPLCKSEIGDSS 413
CPLCK +I S+
Sbjct: 76 CPLCKFDIIKSN 87
>gi|357509173|ref|XP_003624875.1| RING finger protein [Medicago truncatula]
gi|355499890|gb|AES81093.1| RING finger protein [Medicago truncatula]
Length = 400
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 269 CIVFLTFSCIGY-----AMPFILCATICCCLPCIISVLGIREDYSQT----RGATAETIN 319
C+V LTF C+ + + C + L CII ++ + Q GA+ + I
Sbjct: 243 CMV-LTFVCLAFNGFCDGISSFSCLIVFGALFCIIQIIVLAYALVQPLRIREGASEDDIK 301
Query: 320 ALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS-----GEDAVCCICLAKYVD 374
+LP Y+F + D++ E + G+ + IS +D+ CCICL YVD
Sbjct: 302 SLPMYRFSQPNVMIMVDKNKKQLDEARI---GSHNQSHISELSLHPDDSECCICLCSYVD 358
Query: 375 DDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EL L C+H FH +C+ +WL+ A+CPLCK I
Sbjct: 359 GTELYRLPCTHHFHCECISRWLRTKATCPLCKFNI 393
>gi|413924267|gb|AFW64199.1| hypothetical protein ZEAMMB73_725991 [Zea mays]
Length = 95
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 13/83 (15%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
ED + TRGAT+E+INAL + + G GG++AAGT KER +S EDAV
Sbjct: 21 EDTNNTRGATSESINALSSGS-------------EAEGQGGGIVAAGTNKERSLSAEDAV 67
Query: 365 CCICLAKYVDDDELRELICSHVF 387
CCIC+AKY +DELREL +H F
Sbjct: 68 CCICIAKYAQNDELRELPSAHCF 90
>gi|452824772|gb|EME31773.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 351
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 48/182 (26%)
Query: 244 WFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLG- 302
WF+VG VW+F + A LYRL + + + I + +L C I VL
Sbjct: 194 WFIVGMVWVFRCETCQRTAVALYRLSLALVIINLIFLGVSVLL--------ACCIFVLAP 245
Query: 303 --IREDYS-------QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTE 353
R D++ RGAT + I+ + ++
Sbjct: 246 NLFRPDFNLDGSVTFHRRGATKKEIDRILLVRY--------------------------- 278
Query: 354 KERMISGEDAVCCICLAKYVDDDELRELICS--HVFHVDCVDKWLKINASCPLCKSEIGD 411
R S E++ C ICL +Y + + LR L C+ H FH CVD+WL +N SCPLCK+EI
Sbjct: 279 -HRDSSEEESTCPICLCEYEEGNLLRILPCTSKHRFHATCVDRWLILNKSCPLCKAEIDA 337
Query: 412 SS 413
SS
Sbjct: 338 SS 339
>gi|242086537|ref|XP_002439101.1| hypothetical protein SORBIDRAFT_09g000505 [Sorghum bicolor]
gi|241944386|gb|EES17531.1| hypothetical protein SORBIDRAFT_09g000505 [Sorghum bicolor]
Length = 70
Score = 78.2 bits (191), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Query: 269 CIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTR 311
CIVFLTFSCIGYAMP+ILCA I CCLPCIISV+G RE Y+ R
Sbjct: 7 CIVFLTFSCIGYAMPYILCAMIFCCLPCIISVMGFRE-YTNNR 48
>gi|358249356|ref|NP_001239785.1| uncharacterized protein LOC100805406 [Glycine max]
gi|255645197|gb|ACU23096.1| unknown [Glycine max]
Length = 274
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 308 SQTRGATAETINALPTYKFK---SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
S TR T E INALP + +K K+G+ +SG E + GTE S ++
Sbjct: 152 SSTRSMTEEEINALPIHTYKVPVPPKDGSAGLASSSGAAEIKQASGGTEAGAKGSEDELT 211
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C ICL + + +R L C H FH +C+D WL+ +CP+CK IG S
Sbjct: 212 CTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSVS 260
>gi|357509175|ref|XP_003624876.1| RING finger protein [Medicago truncatula]
gi|355499891|gb|AES81094.1| RING finger protein [Medicago truncatula]
Length = 296
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 294 LPCIISVLGIREDYSQT----RGATAETINALPTYKFKSKKNGNLNDQDNSG-GTEGGVL 348
L CI+ ++ + +Q GA+ + I +LP Y+F + D++ + G
Sbjct: 169 LFCIVQIIALAYALTQPLRIREGASEDDIKSLPMYRFCQPNVMIMVDKNKTQLEARTGSH 228
Query: 349 AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS- 407
E + +D+ CCICL YVD EL L C+H FH +C+ +WL+ A+CPLCK
Sbjct: 229 NRSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCECIGRWLRTKATCPLCKFN 288
Query: 408 -EIGD 411
IGD
Sbjct: 289 IRIGD 293
>gi|390340259|ref|XP_799787.3| PREDICTED: uncharacterized protein LOC575286 [Strongylocentrotus
purpuratus]
Length = 1687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGA+ TI N LP +K+K + + + +G EG + E+ C IC
Sbjct: 1427 RGASRSTIERNTLP-HKYKLRHQKESDSSEETGEVEGAAKIPDDDMEK--------CTIC 1477
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L+ + DD+++R L C H+FHV+CVD+WL N CP+C+ +I
Sbjct: 1478 LSYFEDDEDVRRLPCMHLFHVECVDQWLVTNKRCPICRVDI 1518
>gi|242041429|ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
gi|241921963|gb|EER95107.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
Length = 280
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 309 QTRGATAETINALPTYKFKSK-KNGNLNDQDNSGGTEGGVLAAGTEKERMISG------- 360
T + E IN+LP +K+K + + GN Q + G ++ V + G+ E+ G
Sbjct: 150 HTPSMSEEEINSLPVFKYKVQAQQGNAPAQKSDGPSQLSVSSTGSGNEKKQDGLKSDGTS 209
Query: 361 ----EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
++ C +CL + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 210 KTPEDELTCSVCLEQVAVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 264
>gi|413919226|gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 29/200 (14%)
Query: 110 ISVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
++++L+ ++ I + VVL LSR+E+ PL W+ GYA CV + + +R RH
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRHG-- 142
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGR---L 226
++GS++ A A E + ++ + + L+ GR
Sbjct: 143 -------QRGSAVA------------GAAPADVERGSDASSSSSDEDDRELDLHGRRTDY 183
Query: 227 NGLVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF- 284
+ H + A F +W+++G WI GG DAP+LY LCIVFL F
Sbjct: 184 ASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVA 243
Query: 285 ---ILCATICCCLPCIISVL 301
I+ +CCCLPCII++L
Sbjct: 244 LACIIGIAVCCCLPCIIAIL 263
>gi|297795079|ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arabidopsis lyrata subsp.
lyrata]
gi|297311259|gb|EFH41683.1| hypothetical protein ARALYDRAFT_494656 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 17/109 (15%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
+ RG I A+P +KFK + NDQ++ GV E+E+ S ++ C +C
Sbjct: 95 RNRGLDESVIRAIPIFKFKKR-----NDQND------GVFTGEGEEEK--SSQE--CSVC 139
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIG-DSSSP 415
L+++ D+++LR + C H+FH+DC+D WL+ NA+CPLC++ + D+S P
Sbjct: 140 LSEFQDEEKLRIIPNCCHLFHIDCIDVWLQNNANCPLCRARVSCDTSFP 188
>gi|15218247|ref|NP_173013.1| uncharacterized protein [Arabidopsis thaliana]
gi|8072399|gb|AAF71987.1|AC013453_12 Hypothetical protein [Arabidopsis thaliana]
gi|60547563|gb|AAX23745.1| hypothetical protein At1g15600 [Arabidopsis thaliana]
gi|71905403|gb|AAZ52679.1| hypothetical protein At1g15600 [Arabidopsis thaliana]
gi|332191219|gb|AEE29340.1| uncharacterized protein [Arabidopsis thaliana]
Length = 220
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 83/187 (44%), Gaps = 53/187 (28%)
Query: 111 SVELIVTVSQIIASIVVLSLSRNE-NPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGI 169
S+E +VT+ I A I+VL R+E +PQ L WI+GY GC+ATLPIL WRF ++ +
Sbjct: 47 SIEFVVTLVLIAAVIIVLIEPRDEEHPQTMLSIWIIGYTCGCIATLPILCWRFWLYNRSV 106
Query: 170 DSDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGL 229
S+ST +E R T R+N
Sbjct: 107 GSEST----------------------------DEYLRET---------------RINKD 123
Query: 230 VDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDA-----PKLYRLCIVFLTFSCIGYAMPF 284
+D F FF W+VV +WI + S A + + LC+ LTFSCI Y +
Sbjct: 124 MDFFMTG---FFVGWYVV-FLWILSSKAFDSSALDDTTTQYFWLCLALLTFSCIRYVLFN 179
Query: 285 ILCATIC 291
+ A +C
Sbjct: 180 LTLAMVC 186
>gi|348690933|gb|EGZ30747.1| hypothetical protein PHYSODRAFT_295425 [Phytophthora sojae]
Length = 548
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 247 VGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIRED 306
+G+VW++ +++ ++ ++ + S + FI+ C L I L +
Sbjct: 368 LGDVWVY--NTTNAETTEISNNTLPLDPESLVYVLGAFIVTCWSCLALTVITGFLYDQVR 425
Query: 307 YSQTRGA------TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
+Q RGA T E + L K+ + + EGG TE
Sbjct: 426 AAQMRGAAVVRGVTKERLEQLRVTKYCRAERNPQAPTEPLNPAEGG----STEN------ 475
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
D VC ICL ++ D +++R L C H+FHV C+D+WLK N SCP+CKS +
Sbjct: 476 -DDVCPICLIEFEDGEDVRNLPCKHIFHVACIDEWLKRNTSCPMCKSNV 523
>gi|422294477|gb|EKU21777.1| ring u-box domain-containing protein, partial [Nannochloropsis
gaditana CCMP526]
Length = 326
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 202 DEENNRSTETETGNGQNALNFGGR-LNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPS 260
D E T T G+ + GG+ + LV+ + LD F +WF +GN W+FG
Sbjct: 157 DAEAGPRTRGGTSAGRPHPDEGGQGPSVLVEKAREILDIFALIWFTLGNAWVFGSRYCRF 216
Query: 261 DAPKLYRLCIVFLTFSCIGYAMPFILCATI----CCCLPCIISV-LGIREDYSQTRGATA 315
+P ++ + + + + + P +L C C+PC + + + ++ +RGA++
Sbjct: 217 TSPGIFYVSLGIIVMTYVTMLFPVLLALLFVPFACFCMPCFLRLAIQLQAQDRASRGASS 276
Query: 316 ETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDD 375
INALP KF G +G E C ICLA+Y +
Sbjct: 277 AEINALPVVKF------------GVGMFDG--------------AEAGTCAICLAEYEEG 310
Query: 376 DELRELIC--SHVFHV 389
+ LR L C H FHV
Sbjct: 311 EALRLLQCPGKHHFHV 326
>gi|326495954|dbj|BAJ90599.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 314 TAETINALPT--YKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM--------ISGEDA 363
T E IN LP YKF++++ + + + G +E V + + KE+ ++ ++
Sbjct: 160 TEEEINTLPVFRYKFQAQQRSTPSRKSSDGPSEPLVSSPESGKEKKQDADATSKMTEDEL 219
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + V D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 220 TCSVCLEQVVAGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 267
>gi|356536643|ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
Length = 340
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 40/159 (25%)
Query: 270 IVFLTFSCIGYAMPFILCATICCCLPC-------IISVLGIRED-------YSQTRGATA 315
I+F +F IGY M + CCL I S+ + ED S+ RG
Sbjct: 34 IMFTSFFLIGYYM-----LVVKCCLNWSHVDHVRIFSLSRLHEDPSAPYSTASEPRGLEE 88
Query: 316 ETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDD 375
I +P ++K ++ G TE G + +IS E C +CL+++ D
Sbjct: 89 AVIKLIPVIQYKPEE----------GNTEFG-------ERSLISSE---CSVCLSEFEQD 128
Query: 376 DELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
++LR + CSHVFH+DC+D WL+ NA CPLC+ + +S
Sbjct: 129 EKLRVIPNCSHVFHIDCIDVWLQNNAHCPLCRRTVSLTS 167
>gi|297597455|ref|NP_001043999.2| Os01g0703300 [Oryza sativa Japonica Group]
gi|255673600|dbj|BAF05913.2| Os01g0703300, partial [Oryza sativa Japonica Group]
Length = 64
Score = 74.3 bits (181), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 39/45 (86%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CCICLA+Y + +E+R+L C+H+FH+ CVD+WL+I +SCPLCK E+
Sbjct: 19 CCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 63
>gi|388502038|gb|AFK39085.1| unknown [Lotus japonicus]
Length = 89
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 39/55 (70%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
ER +S EDA CCIC++ Y D EL L C+H FH C+ KWLK+NA+CPLCK I
Sbjct: 28 ERALSPEDAECCICISSYEDGAELHSLPCNHHFHSTCIVKWLKMNATCPLCKYNI 82
>gi|124286866|ref|NP_001074393.1| E3 ubiquitin-protein ligase ZNRF3 precursor [Mus musculus]
gi|81910114|sp|Q5SSZ7.1|ZNRF3_MOUSE RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
Length = 913
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 206 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 256
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 257 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 303
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 304 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334
>gi|187956481|gb|AAI51081.1| Znrf3 protein [Mus musculus]
gi|223462533|gb|AAI51084.1| Zinc and ring finger 3 [Mus musculus]
Length = 808
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|74223529|dbj|BAE21609.1| unnamed protein product [Mus musculus]
Length = 809
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 110 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 160
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 161 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 207
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 208 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 238
>gi|255576814|ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
gi|223531217|gb|EEF33062.1| ring finger protein, putative [Ricinus communis]
Length = 376
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 22/106 (20%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
+ RG I ++P +KFK + NG SG G L+ C +C
Sbjct: 98 ENRGLDESVIRSIPIFKFKKEGNG-------SGDIGGRTLSE--------------CAVC 136
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
L ++ ++++LR + CSHVFH+DC+D WL+ NA+CPLC++ I ++
Sbjct: 137 LNEFQENEKLRIIPNCSHVFHIDCIDVWLQNNANCPLCRNSISSTT 182
>gi|149047611|gb|EDM00281.1| rCG35969 [Rattus norvegicus]
Length = 814
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|392333113|ref|XP_003752796.1| PREDICTED: zinc/RING finger protein 3-like [Rattus norvegicus]
Length = 816
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|15239865|ref|NP_199155.1| RING-H2 finger protein ATL16 [Arabidopsis thaliana]
gi|68565310|sp|Q9LSW9.1|ATL16_ARATH RecName: Full=RING-H2 finger protein ATL16
gi|8843895|dbj|BAA97421.1| unnamed protein product [Arabidopsis thaliana]
gi|30725342|gb|AAP37693.1| At5g43420 [Arabidopsis thaliana]
gi|110736470|dbj|BAF00203.1| hypothetical protein [Arabidopsis thaliana]
gi|332007576|gb|AED94959.1| RING-H2 finger protein ATL16 [Arabidopsis thaliana]
Length = 375
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 15/109 (13%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
++RG I A+P +KFK + + N GV E+E ++ C +C
Sbjct: 95 RSRGLDESVIRAIPIFKFKKRYDQN-----------DGVFTGEGEEEEEKRSQE--CSVC 141
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIG-DSSSP 415
L+++ D+++LR + CSH+FH+DC+D WL+ NA+CPLC++ + D+S P
Sbjct: 142 LSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFP 190
>gi|148708581|gb|EDL40528.1| mCG14691, isoform CRA_b [Mus musculus]
Length = 814
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|345323839|ref|XP_001508525.2| PREDICTED: zinc/RING finger protein 3 [Ornithorhynchus anatinus]
Length = 853
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFKSK G+ EG A T + S + C ICL KY+D +EL
Sbjct: 160 EKMETRKFKSKSKGH---------REGSCGALDT----LGSSSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHKKCVDPWLLQHHTCPHCRHSI 237
>gi|354486388|ref|XP_003505363.1| PREDICTED: zinc/RING finger protein 3 [Cricetulus griseus]
Length = 818
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|341946951|gb|AEL13393.1| ring finger protein [Zea mays]
Length = 280
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 316 ETINALPTYKFKSK-KNGNLNDQDNSGGTEGGVLAAGTEKERMISG-----------EDA 363
E IN+LP +K+K + + GN + + ++ V + G+ E+ G ++
Sbjct: 157 EEINSLPVFKYKVQAQQGNAPARKSDEASQLSVSSTGSSNEKKQDGLKADGTGKTTQDEL 216
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 217 TCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 264
>gi|226533202|ref|NP_001147045.1| protein binding protein [Zea mays]
gi|195606842|gb|ACG25251.1| protein binding protein [Zea mays]
Length = 280
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 316 ETINALPTYKFKSK-KNGNLNDQDNSGGTEGGVLAAGTEKERMISG-----------EDA 363
E IN+LP +K+K + + GN + + ++ V + G+ E+ G ++
Sbjct: 157 EEINSLPVFKYKVQAQQGNAPARKSDEASQLSVSSTGSSNEKKQDGLKADGTGKTTQDEL 216
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 217 TCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 264
>gi|356542379|ref|XP_003539644.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Glycine max]
Length = 274
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 308 SQTRGATAETINALPTYKFK---SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
S TR T E INALP + +K K+G+ +S E + GTE ++
Sbjct: 152 SSTRSMTEEEINALPIHTYKVPVPPKDGSAGLASSSDAAEVKQESGGTEAGTGGPEDELT 211
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C ICL + + +R L C H FH +C+D WL+ +CP+CK IG S
Sbjct: 212 CTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSVS 260
>gi|218191343|gb|EEC73770.1| hypothetical protein OsI_08445 [Oryza sativa Indica Group]
Length = 213
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 229 LVDHFKMALDCFFAVWFVVGNVWI-FGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPF--- 284
+ H + A F +W+++G W+ GG DAP+LY LCIVFL F
Sbjct: 74 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 133
Query: 285 -ILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGT 343
I+ +CCCLPCII++L S GA+ + I +P YKF+ + +G +
Sbjct: 134 CIIGIAVCCCLPCIIAIL---YAVSDQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSS 190
Query: 344 EGGVLAAGTEK--ERMISGEDAV 364
G ++ GT + E++++ EDAV
Sbjct: 191 GGIMIECGTNQPIEKVLAAEDAV 213
>gi|219886001|gb|ACL53375.1| unknown [Zea mays]
gi|413956192|gb|AFW88841.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 280
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 316 ETINALPTYKFKSK-KNGNLNDQDNSGGTEGGVLAAGTEKERMISG-----------EDA 363
E IN+LP +K+K + + GN + + ++ V + G+ E+ G ++
Sbjct: 157 EEINSLPVFKYKVQAQQGNAPARKSDEASQLSVSSTGSGNEKKQDGLKADGTGKTPQDEL 216
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 217 TCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 264
>gi|255081262|ref|XP_002507853.1| predicted protein [Micromonas sp. RCC299]
gi|226523129|gb|ACO69111.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
G +A+ I+A+P + + S G ++ + GG G E E + C +CL
Sbjct: 310 GVSADVIDAMPAWTYHSPTPGAMDPSGSPGG--------GPEHE---CSQVPCCSVCLCD 358
Query: 372 YVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
D D +R L C HV+H DC+DKWL +++CP+CK ++ + S+
Sbjct: 359 AEDGDAMRTLPCMHVYHADCIDKWLGEHSTCPICKHDVREGSA 401
>gi|388495346|gb|AFK35739.1| unknown [Lotus japonicus]
Length = 249
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 308 SQTRGATAETINALPTYKFK---SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
S T T E IN+LP + +K K+G +SG E + G E +S ++
Sbjct: 127 SSTPSMTEEEINSLPVHTYKVAVPTKDGTAGLASSSGAAEIKQDSEGAEGSIKVSVDELT 186
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C ICL + +R L C H FH +C+D+WL+ +CP+CK +G
Sbjct: 187 CTICLEHVKRGELVRNLPCLHQFHANCIDQWLRQQGTCPVCKFRMG 232
>gi|242062944|ref|XP_002452761.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
gi|241932592|gb|EES05737.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
Length = 89
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 341 GGTEGGVLAAGTEK--ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI 398
G + G ++ GT + E++++ EDA CCIC++ Y D +L EL C H FH C++KWL+I
Sbjct: 7 GSSSGIMIECGTNQPIEKVLAAEDAECCICISAYDDGAKLCELPCGHHFHCICINKWLRI 66
Query: 399 NASCPLCKSEIGDSSS 414
N CPLC+ + ++S
Sbjct: 67 NVMCPLCQYNVPKNTS 82
>gi|452823709|gb|EME30717.1| hypothetical protein Gasu_19590 [Galdieria sulphuraria]
Length = 286
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV--CCIC 368
+GA+ + I +P+Y F + + NL + T + + KE ED C IC
Sbjct: 190 QGASDDLIERIPSYIF-VQPDQNLAKNELQENTRQSSVPSFAPKE----NEDTAMSCSIC 244
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L YVD ++LR L C H FH CVDKWL+ A CP+CK I
Sbjct: 245 LEAYVDGEQLRVLPCMHQFHSLCVDKWLRRYARCPICKFAI 285
>gi|353231520|emb|CCD77938.1| unnamed protein product [Schistosoma mansoni]
Length = 1383
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL--AAGTEKERMI 358
L ++ + + RG + E + +LP + SK + +L S G + T + +
Sbjct: 1268 LAVQLESNNGRGLSKEELESLPIRLYTSKHSDSL-----SSGKPNTTICNEVKTNTQNDV 1322
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
S D C ICL Y D ++R++ C H FH CVDKWLK +CPLC+++
Sbjct: 1323 SECDR-CMICLDDYADSQQIRQMRCLHEFHASCVDKWLKTKRTCPLCRAD 1371
>gi|297848660|ref|XP_002892211.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata]
gi|297338053|gb|EFH68470.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + +AAG + + S
Sbjct: 90 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VAAGEDDQNKNSQ 132
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 133 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>gi|224032039|gb|ACN35095.1| unknown [Zea mays]
gi|413956191|gb|AFW88840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 207
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 314 TAETINALPTYKFKSK-KNGNLNDQDNSGGTEGGVLAAGTEKERMISG-----------E 361
+ E IN+LP +K+K + + GN + + ++ V + G+ E+ G +
Sbjct: 82 SEEEINSLPVFKYKVQAQQGNAPARKSDEASQLSVSSTGSGNEKKQDGLKADGTGKTPQD 141
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +CL + + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 142 ELTCSVCLEQVMVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 191
>gi|260818404|ref|XP_002604373.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
gi|229289699|gb|EEN60384.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 24/119 (20%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS-GEDA 363
E+ RG T + I LP+ KF + + +R+ S G +
Sbjct: 349 EEDEAPRGLTKDEIAQLPSRKFTRQ-----------------------DAQRLASEGNEN 385
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSAQ 422
C IC+ +Y ++LR + C+H FH CVD+WLK N SCP+C+ ++ S +P + Q
Sbjct: 386 SCTICMVEYKTGNKLRRMPCAHEFHSKCVDRWLKQNGSCPVCRQQVEISVNPQTAEGQQ 444
>gi|167017656|gb|ABZ04799.1| At1g04360-like protein [Arabidopsis lyrata]
Length = 361
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + +AAG + + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VAAGEDDQNKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|328708855|ref|XP_003243816.1| PREDICTED: hypothetical protein LOC100573509 isoform 1
[Acyrthosiphon pisum]
gi|328708857|ref|XP_003243817.1| PREDICTED: hypothetical protein LOC100573509 isoform 2
[Acyrthosiphon pisum]
Length = 760
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 25/114 (21%)
Query: 298 ISVLGIREDYSQTRGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKE 355
+ ++ R + RGA+ +TI N P +K+K K + +DN TEK
Sbjct: 646 LRLMEQRRIHMMNRGASKDTIEKNTFP-HKYKRIKRSSDEMEDN------------TEK- 691
Query: 356 RMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C ICL+ + D +++R L C H+FHVDC+D+WL N CP+C+ +I
Sbjct: 692 ---------CTICLSDFEDTEDVRRLPCMHLFHVDCIDQWLSSNKRCPICRVDI 736
>gi|413938750|gb|AFW73301.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 75
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
ER++ EDA CCICL+ Y D EL L C+H FH C+ KWL++NA+CPLCK I
Sbjct: 14 ERILLREDAECCICLSSYEDGAELSALPCNHHFHWPCITKWLRMNATCPLCKYNI 68
>gi|148708580|gb|EDL40527.1| mCG14691, isoform CRA_a [Mus musculus]
Length = 246
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + SG + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|167017598|gb|ABZ04770.1| At1g04360 [Arabidopsis thaliana]
gi|167017608|gb|ABZ04775.1| At1g04360 [Arabidopsis thaliana]
gi|167017616|gb|ABZ04779.1| At1g04360 [Arabidopsis thaliana]
gi|167017640|gb|ABZ04791.1| At1g04360 [Arabidopsis thaliana]
gi|167017648|gb|ABZ04795.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 72 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 114
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 115 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|344295009|ref|XP_003419207.1| PREDICTED: zinc/RING finger protein 3 [Loxodonta africana]
Length = 912
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + S + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGAVDT----LSSSSMSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHKKCVDPWLLQHHTCPHCRHNI 237
>gi|21536693|gb|AAM61025.1| unknown [Arabidopsis thaliana]
Length = 340
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 26/107 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG +A+TI +LP+ ++K N N G + C I
Sbjct: 257 TESRGLSADTIASLPSKRYKEGDNQN--------------------------GTNESCVI 290
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
C Y DD++L L C H +H +C++ WLKIN CP+C +E+ S+S
Sbjct: 291 CRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337
>gi|167017652|gb|ABZ04797.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 72 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 114
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 115 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|167017604|gb|ABZ04773.1| At1g04360 [Arabidopsis thaliana]
gi|167017610|gb|ABZ04776.1| At1g04360 [Arabidopsis thaliana]
gi|167017612|gb|ABZ04777.1| At1g04360 [Arabidopsis thaliana]
gi|167017614|gb|ABZ04778.1| At1g04360 [Arabidopsis thaliana]
gi|167017620|gb|ABZ04781.1| At1g04360 [Arabidopsis thaliana]
gi|167017624|gb|ABZ04783.1| At1g04360 [Arabidopsis thaliana]
gi|167017628|gb|ABZ04785.1| At1g04360 [Arabidopsis thaliana]
gi|167017630|gb|ABZ04786.1| At1g04360 [Arabidopsis thaliana]
gi|167017634|gb|ABZ04788.1| At1g04360 [Arabidopsis thaliana]
gi|167017636|gb|ABZ04789.1| At1g04360 [Arabidopsis thaliana]
gi|167017646|gb|ABZ04794.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 72 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 114
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 115 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|167017600|gb|ABZ04771.1| At1g04360 [Arabidopsis thaliana]
gi|167017626|gb|ABZ04784.1| At1g04360 [Arabidopsis thaliana]
gi|167017632|gb|ABZ04787.1| At1g04360 [Arabidopsis thaliana]
gi|167017638|gb|ABZ04790.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 72 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 114
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 115 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|167017602|gb|ABZ04772.1| At1g04360 [Arabidopsis thaliana]
gi|167017606|gb|ABZ04774.1| At1g04360 [Arabidopsis thaliana]
gi|167017622|gb|ABZ04782.1| At1g04360 [Arabidopsis thaliana]
gi|167017642|gb|ABZ04792.1| At1g04360 [Arabidopsis thaliana]
gi|167017644|gb|ABZ04793.1| At1g04360 [Arabidopsis thaliana]
gi|167017650|gb|ABZ04796.1| At1g04360 [Arabidopsis thaliana]
gi|167017654|gb|ABZ04798.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 72 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 114
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 115 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|18402411|ref|NP_566651.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
gi|75335434|sp|Q9LT17.1|BBR_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER-related; Short=AtBBR
gi|11994203|dbj|BAB01306.1| unnamed protein product [Arabidopsis thaliana]
gi|15010578|gb|AAK73948.1| AT3g19910/MPN9_15 [Arabidopsis thaliana]
gi|15028363|gb|AAK76658.1| unknown protein [Arabidopsis thaliana]
gi|19310707|gb|AAL85084.1| unknown protein [Arabidopsis thaliana]
gi|332642786|gb|AEE76307.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
Length = 340
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 26/107 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG +A+TI +LP+ ++K N N G + C I
Sbjct: 257 TESRGLSADTIASLPSKRYKEGDNQN--------------------------GTNESCVI 290
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
C Y DD++L L C H +H +C++ WLKIN CP+C +E+ S+S
Sbjct: 291 CRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337
>gi|449455322|ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
Length = 421
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 348 LAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCK 406
L+ T K R D C +CL ++ DDD +R L ICSH FHVDC+D WL+ +A+CPLC+
Sbjct: 153 LSVYTAKSR-----DRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR 207
Query: 407 SEIGDSSSPL 416
+ + SP
Sbjct: 208 AVVFRPESPF 217
>gi|356544176|ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
Length = 247
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG + E I+ LPT K+K GNL + NSG C I
Sbjct: 163 TQSRGLSQELIDMLPTSKYKF---GNLFKRKNSG---------------------KRCVI 198
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C Y D+ +L CSHV+H +C+ KWL IN CP+C +E+
Sbjct: 199 CQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNTEV 240
>gi|15219716|ref|NP_171931.1| RING-H2 finger protein ATL1 [Arabidopsis thaliana]
gi|68565098|sp|P93823.1|ATL1_ARATH RecName: Full=RING-H2 finger protein ATL1
gi|1903359|gb|AAB70441.1| F19P19.21 [Arabidopsis thaliana]
gi|28393753|gb|AAO42287.1| unknown protein [Arabidopsis thaliana]
gi|29824325|gb|AAP04123.1| unknown protein [Arabidopsis thaliana]
gi|332189567|gb|AEE27688.1| RING-H2 finger protein ATL1 [Arabidopsis thaliana]
Length = 381
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 90 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 132
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 133 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>gi|297830656|ref|XP_002883210.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329050|gb|EFH59469.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 26/107 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG +A+TI +LP+ ++K N N G + C I
Sbjct: 254 TESRGLSADTIASLPSKRYKEGDNQN--------------------------GTNESCVI 287
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
C Y DD++L L C H +H +C++ WLKIN CP+C +E+ S+S
Sbjct: 288 CRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 334
>gi|167017590|gb|ABZ04766.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|320168055|gb|EFW44954.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 573
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 18/120 (15%)
Query: 307 YSQTRGATAETINALPTYKFKSKKNGNLNDQ-DNSG-------GTEGGVLAAGTEKERMI 358
+ +T+ T E +N+LPT F++ K + D SG GTE G + A +++
Sbjct: 273 HPETKTLTQEQVNSLPTRTFQAPKKATASRALDASGPVSRGQQGTERGAVDADSQETAPP 332
Query: 359 SGE---------DAVCCICLAKYVDDDELRELICSHVFHVDCVDKW-LKINASCPLCKSE 408
+ + + C ICL + + D LR L CSH FH +CVD+W L N +CPLC+S+
Sbjct: 333 TADQVSLASTVCEETCVICLDDFKEGDTLRCLPCSHDFHQNCVDQWLLTKNRACPLCRSQ 392
>gi|358337630|dbj|GAA33104.2| RING finger protein 38 [Clonorchis sinensis]
Length = 1239
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM--- 357
L ++ + S RG T E ++ LP + G + A T+ E
Sbjct: 1135 LAVQLESSGRRGLTKEELDTLPVRSY------------------GKIHEAPTQHENTKDC 1176
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
++ D C ICL Y D LR + C H FH CVDKWLK +CPLC+++ D
Sbjct: 1177 VAETDDRCMICLDDYESKDLLRAMRCRHEFHAKCVDKWLKTKRTCPLCRADAFD 1230
>gi|157105744|ref|XP_001649008.1| hypothetical protein AaeL_AAEL004356 [Aedes aegypti]
gi|108880039|gb|EAT44264.1| AAEL004356-PA [Aedes aegypti]
Length = 517
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 30/121 (24%)
Query: 295 PCIISVLG----IREDYSQTRGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVL 348
P ++S L + ED RGAT E I N P +K+K + + D+D
Sbjct: 411 PSLLSSLNRFVRVIEDTCSNRGATQEMIEHNTFP-HKYKRLRRASETDED---------- 459
Query: 349 AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
+EK C ICL+++ D+++R L C H+FH DCVD+WL N CP+C+ +
Sbjct: 460 ---SEK----------CTICLSQFEVDNDVRRLPCMHLFHKDCVDQWLVTNKHCPICRVD 506
Query: 409 I 409
I
Sbjct: 507 I 507
>gi|297798046|ref|XP_002866907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312743|gb|EFH43166.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 323 TYKFKSKKNGNLNDQ---DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELR 379
T F+ + N N + + DN+ V A T KE I +D C ICL + D + +R
Sbjct: 80 TRYFRRRANDNFSRRGGLDNAVVESFPVFAYSTVKESKIGSKDLECAICLNELEDHETVR 139
Query: 380 EL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
L IC+H+FH+DC+D WL +A+CP+C+S + S
Sbjct: 140 LLPICNHLFHIDCIDAWLYSHATCPVCRSNLTAKS 174
>gi|167017568|gb|ABZ04755.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|167017576|gb|ABZ04759.1| At1g04360 [Arabidopsis thaliana]
gi|167017580|gb|ABZ04761.1| At1g04360 [Arabidopsis thaliana]
gi|167017584|gb|ABZ04763.1| At1g04360 [Arabidopsis thaliana]
gi|167017588|gb|ABZ04765.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|167017572|gb|ABZ04757.1| At1g04360 [Arabidopsis thaliana]
gi|167017578|gb|ABZ04760.1| At1g04360 [Arabidopsis thaliana]
gi|167017582|gb|ABZ04762.1| At1g04360 [Arabidopsis thaliana]
gi|167017592|gb|ABZ04767.1| At1g04360 [Arabidopsis thaliana]
gi|167017594|gb|ABZ04768.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|167017586|gb|ABZ04764.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|167017570|gb|ABZ04756.1| At1g04360 [Arabidopsis thaliana]
gi|167017574|gb|ABZ04758.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 78 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 120
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 121 E---CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 167
>gi|189522117|ref|XP_701217.3| PREDICTED: RING finger protein 165 [Danio rerio]
Length = 347
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + RGA TI T+ K KK L L
Sbjct: 236 AVRESYEELLQLEDRLGNVNRGAVQATIERF-TFPHKYKKRRPLE------------LKI 282
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
G ++E + + E C ICL+ D++++R L C H+FH CVD+WL N CP+C+ +I
Sbjct: 283 GMDEEELDTDEK--CTICLSMLEDEEDVRRLPCMHLFHQACVDQWLATNKKCPICRVDIE 340
Query: 411 DSSSP 415
SP
Sbjct: 341 TQLSP 345
>gi|224130100|ref|XP_002320752.1| predicted protein [Populus trichocarpa]
gi|222861525|gb|EEE99067.1| predicted protein [Populus trichocarpa]
Length = 77
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 39/58 (67%)
Query: 352 TEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
T ER EDA CCICL+ Y D ELREL C+H FH C+DKWL INA+ PLCK I
Sbjct: 8 TPIERAFPLEDAECCICLSAYEDGSELRELPCNHHFHRMCIDKWLCINATYPLCKLNI 65
>gi|167017618|gb|ABZ04780.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 21/110 (19%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L I + RG I A+P +KFK + + AG E + S
Sbjct: 72 LMIYSPHEVNRGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQ 114
Query: 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
E C +CL ++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 115 E---CSVCLNEFQEDEKLRIIPNCWHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|414866068|tpg|DAA44625.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 314 TAETINALPTYKFK----------SKKNG--NLNDQDNSGGTE---GGVLAAGTEKERMI 358
+ E IN+LP +K+K K +G L+ G E G+ A GT K
Sbjct: 155 SEEEINSLPVFKYKVQAQQRHPPARKSDGPSQLSVSSTGSGNEVKQDGLKADGTSKP--- 211
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
S ++ C +CL + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 212 SEDELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 264
>gi|410918361|ref|XP_003972654.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 467
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 27/109 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I +P+YKF S + +
Sbjct: 383 LAERLGEAKPRGLTKADIEHIPSYKFNSNNHHS--------------------------- 415
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
E +C +C+ + LR L CSH FH CVDKWLK N +CP+C++E+
Sbjct: 416 EQTMCVVCMCDFESRQLLRVLPCSHEFHAKCVDKWLKANRTCPICRAEV 464
>gi|301119555|ref|XP_002907505.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106017|gb|EEY64069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 551
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
I ED +C ICL ++ D +++R L C H+FHV C+D+WLK N SCP+CKS +
Sbjct: 475 IENED-ICPICLIEFEDGEDVRNLPCKHIFHVACIDEWLKRNTSCPMCKSNV 525
>gi|167017596|gb|ABZ04769.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 21/100 (21%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
RG I A+P +KFK + + AG E + S E C +CL
Sbjct: 82 RGLDESAIRAIPVFKFKKRD-----------------VVAGEEDQSKNSQE---CSVCLN 121
Query: 371 KYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
++ +D++LR + C HVFH+DC+D WL+ NA+CPLC++ +
Sbjct: 122 EFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 161
>gi|212724133|ref|NP_001131833.1| uncharacterized protein LOC100193208 [Zea mays]
gi|194688576|gb|ACF78372.1| unknown [Zea mays]
gi|195627610|gb|ACG35635.1| protein binding protein [Zea mays]
gi|414866067|tpg|DAA44624.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 314 TAETINALPTYKFK----------SKKNG--NLNDQDNSGGTE---GGVLAAGTEKERMI 358
+ E IN+LP +K+K K +G L+ G E G+ A GT K
Sbjct: 155 SEEEINSLPVFKYKVQAQQRHPPARKSDGPSQLSVSSTGSGNEEKQDGLKADGTSKP--- 211
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
S ++ C +CL + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 212 SEDELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 264
>gi|327266890|ref|XP_003218236.1| PREDICTED: e3 ubiquitin-protein ligase RNF13-like [Anolis
carolinensis]
Length = 384
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 39/151 (25%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRG--ATAETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI----GDSSSPLVQDSAQH 423
K +CP+CK ++ GDS S DS+Q
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDSE--TDSSQE 301
>gi|390355526|ref|XP_790205.3| PREDICTED: uncharacterized protein LOC585279 isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG + I+ LP+Y++ + +NDQ
Sbjct: 401 LAERLGEAKPRGLSKANIDQLPSYRYNPETPRTINDQ----------------------- 437
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK---SEIGDSSS 414
C +C++ + LR L CSH FH CVDKWLK N +CP+C+ SEI SS
Sbjct: 438 --TCCVVCMSDFETRQTLRVLPCSHEFHARCVDKWLKSNRTCPICRADASEINSQSS 492
>gi|390355528|ref|XP_003728567.1| PREDICTED: uncharacterized protein LOC585279 isoform 1
[Strongylocentrotus purpuratus]
Length = 514
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG + I+ LP+Y++ + +NDQ
Sbjct: 423 LAERLGEAKPRGLSKANIDQLPSYRYNPETPRTINDQ----------------------- 459
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK---SEIGDSSS 414
C +C++ + LR L CSH FH CVDKWLK N +CP+C+ SEI SS
Sbjct: 460 --TCCVVCMSDFETRQTLRVLPCSHEFHARCVDKWLKSNRTCPICRADASEINSQSS 514
>gi|195610766|gb|ACG27213.1| hypothetical protein [Zea mays]
gi|195624986|gb|ACG34323.1| hypothetical protein [Zea mays]
gi|413926541|gb|AFW66473.1| hypothetical protein ZEAMMB73_193126 [Zea mays]
Length = 35
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 29/33 (87%)
Query: 235 MALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYR 267
MALDCFFAVWFVVGNVW+F GHSS DAP LYR
Sbjct: 1 MALDCFFAVWFVVGNVWVFDGHSSAHDAPNLYR 33
>gi|395517774|ref|XP_003763048.1| PREDICTED: zinc/RING finger protein 3, partial [Sarcophilus
harrisii]
Length = 613
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 69 PPRQPTEYFDMGIFLAF--------FVVVSLVCLFLLVKIKLKQRRSQNSMNRLAV-QAL 119
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFKSK S GT G A + + C ICL KY+D +EL
Sbjct: 120 EKMETRKFKSK----------SKGTREGSWGALDTLSSSST---SDCAICLEKYIDGEEL 166
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 167 RVIPCTHRFHKRCVDPWLLQHHTCPHCRHNI 197
>gi|323482647|gb|ADX86798.1| zinc-finger transcription factor [Triticum aestivum]
Length = 280
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 314 TAETINALPT--YKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM--------ISGEDA 363
T E IN LP YKF++++ + + + G +E V + + KE+ ++ ++
Sbjct: 160 TEEEINTLPVFRYKFQAQQRSTPSRKSSGGPSEPLVSSPESGKEKKQDADATSKMTDDEL 219
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + V D LR L C H FHV+C+D WL+ +C +CK ++ +
Sbjct: 220 TCSVCLEQVVAGDLLRSLPCLHRFHVNCIDPWLRQQGTCLICKHQVSN 267
>gi|224105475|ref|XP_002313823.1| predicted protein [Populus trichocarpa]
gi|222850231|gb|EEE87778.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
C +CL ++ DD+ +R L +CSH FHVDC+D WL+ +A+CPLC++ I + SP +
Sbjct: 97 CAVCLLEFEDDEYVRTLPVCSHAFHVDCIDIWLRSHANCPLCRAGIFRAESPFI 150
>gi|334327495|ref|XP_001380092.2| PREDICTED: zinc/RING finger protein 3-like [Monodelphis domestica]
Length = 874
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 216 PPRQPTEYFDMGIFLAF--------FVVVSLVCLFLLVKIKLKQRRSQNSMNRLAV-QAL 266
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFKSK G+ ++ S G + + S + C ICL KY+D +EL
Sbjct: 267 EKMETRKFKSKSKGS---REGSWGA----------LDTLSSSSTSDCAICLEKYIDGEEL 313
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 314 RVIPCTHRFHKKCVDPWLLQHHTCPHCRHNI 344
>gi|328776000|ref|XP_001122053.2| PREDICTED: hypothetical protein LOC726305 [Apis mellifera]
Length = 630
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 339 NSGGT----EGGVLAAGTEKERMISGEDAV--CCICLAKYVDDDELRELICSHVFHVDCV 392
N G T E ++E+ + ED++ C ICL+++ D + +R L C H+FH+DCV
Sbjct: 542 NCGATQESIESHTFRYKYKREKKVENEDSIEKCTICLSEFEDCESVRRLPCMHLFHIDCV 601
Query: 393 DKWLKINASCPLCKSEI 409
D+WL N CP+C+ +I
Sbjct: 602 DQWLCTNKRCPICRVDI 618
>gi|108707431|gb|ABF95226.1| zinc finger family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108707432|gb|ABF95227.1| zinc finger family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|218192524|gb|EEC74951.1| hypothetical protein OsI_10935 [Oryza sativa Indica Group]
gi|222624650|gb|EEE58782.1| hypothetical protein OsJ_10309 [Oryza sativa Japonica Group]
Length = 280
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 314 TAETINALPTYKFKSKKN-GNLNDQDNSGGTEGGV--LAAGTEKERMISGEDAV------ 364
+ E INALP +K+K + + G+ + + + G ++ V +G EK++ DA
Sbjct: 159 SEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLED 218
Query: 365 ---CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + V D LR L C H FH +C+D WL+ +CP+CK + D
Sbjct: 219 ELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSD 268
>gi|326929821|ref|XP_003211054.1| PREDICTED: zinc/RING finger protein 3-like [Meleagris gallopavo]
Length = 834
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFKSK G+ EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFKSKSKGH---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHKKCVDPWLLQHHTCPHCRHNI 237
>gi|401410442|ref|XP_003884669.1| hypothetical protein NCLIV_050670 [Neospora caninum Liverpool]
gi|325119087|emb|CBZ54639.1| hypothetical protein NCLIV_050670 [Neospora caninum Liverpool]
Length = 515
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 352 TEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
T K S CCICL ++ D++ +REL CSH FH C+DKWL N CPLC I +
Sbjct: 442 TRKGAHFSSVQENCCICLGEFADEEVIRELRCSHFFHQGCIDKWLLKNKQCPLCLRSIDE 501
Query: 412 SSSP 415
+ P
Sbjct: 502 AFDP 505
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 244 WFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGI 303
WF++G VW+F H S+AP L++L + + S + F +C + + G+
Sbjct: 154 WFILGVVWVFNAHEC-SEAPGLWKLTVSAIVVSVLRLVTTF-----VCFWISFPPNAGGL 207
Query: 304 REDYSQTRGATAETINALPTYKFKSKK 330
+ AT E I LP + KK
Sbjct: 208 QTSDRFVGAATPEQIAKLPLLSYAQKK 234
>gi|387019691|gb|AFJ51963.1| e3 ubiquitin-protein ligase RNF13-like [Crotalus adamanteus]
Length = 381
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 37/142 (26%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRG--ATAETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI----GDSSS 414
K +CP+CK ++ GDS S
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDS 294
>gi|363739989|ref|XP_415210.3| PREDICTED: zinc/RING finger protein 3 [Gallus gallus]
Length = 834
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFKSK G+ EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFKSKSKGH---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHKKCVDPWLLQHHTCPHCRHNI 237
>gi|357112906|ref|XP_003558246.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Brachypodium
distachyon]
Length = 284
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 314 TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL----AAGTEKERMISG------EDA 363
+ E IN LP +K+K + SG +L + EK + G ++
Sbjct: 160 SEEEINTLPVFKYKFQAQQGSASARKSGDGPSVLLPSSSGSSNEKSQDAYGASKTPEDEL 219
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
C +CL + V D LR L C H FHV+C+D WL+ +CP+CK ++ DS
Sbjct: 220 TCSVCLEQVVVGDLLRSLPCLHQFHVECIDPWLRQQGTCPVCKHQVSDS 268
>gi|195446140|ref|XP_002070646.1| GK10924 [Drosophila willistoni]
gi|194166731|gb|EDW81632.1| GK10924 [Drosophila willistoni]
Length = 1411
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 278 IGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI--NALPTYKFKSKKNGNLN 335
IG A P L + I P RGAT ETI N LP +K++ + +
Sbjct: 1285 IGLATPLSLGSRILIGPP------------RPNRGATLETIERNTLP-HKYRRVRRPSET 1331
Query: 336 DQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKW 395
D+D EK C ICL+ + ++++R L C H+FH DCVD+W
Sbjct: 1332 DED-------------AEK----------CAICLSLFEIENDVRRLPCMHLFHTDCVDQW 1368
Query: 396 LKINASCPLCKSEI 409
L N CP+C+ +I
Sbjct: 1369 LVTNKHCPICRVDI 1382
>gi|194901950|ref|XP_001980514.1| GG17197 [Drosophila erecta]
gi|190652217|gb|EDV49472.1| GG17197 [Drosophila erecta]
Length = 1251
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT ETI N LP +K++ + + +D+D EK C IC
Sbjct: 1150 RGATLETIERNTLP-HKYRRVRRPSESDED-------------AEK----------CAIC 1185
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L + ++E+R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1186 LTLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1226
>gi|195501805|ref|XP_002097951.1| GE10089 [Drosophila yakuba]
gi|194184052|gb|EDW97663.1| GE10089 [Drosophila yakuba]
Length = 1259
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT ETI N LP +K++ + + +D+D EK C IC
Sbjct: 1158 RGATLETIERNTLP-HKYRRVRRPSESDED-------------AEK----------CAIC 1193
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L + ++E+R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1194 LTLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1234
>gi|255076409|ref|XP_002501879.1| predicted protein [Micromonas sp. RCC299]
gi|226517143|gb|ACO63137.1| predicted protein [Micromonas sp. RCC299]
Length = 333
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
R AT E ++ALPT +D SG G A G + + C +CL
Sbjct: 189 RPATREEVDALPTRAAGDADCARCSDA--SGAARDGRTADG------VDAQGPQCYVCLG 240
Query: 371 KYVDDDELRELICSHVFHVDCVDKW-LKINASCPLCKSEIGD 411
+Y + LR L C H FH +CVD+W L++ +CP C++ IGD
Sbjct: 241 EYERGETLRTLPCGHAFHAECVDRWLLEMRGACPTCRAPIGD 282
>gi|8072397|gb|AAF71985.1|AC013453_10 Hypothetical protein [Arabidopsis thaliana]
Length = 180
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 55/184 (29%)
Query: 111 SVELIVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYASGCVATLPILYWRFRNRHQGID 170
S+E ++T+ QI+ +I+V+ ++ E P+A WI+ YA G +A LPIL WRF
Sbjct: 41 SIEFVMTLVQIVVAILVVKGTKGEYPEA---TWILVYAYGSIANLPILCWRFW------- 90
Query: 171 SDSTQLRQGSSLPTPPEPTSSYTAISANQASDEENNRSTETETGNGQNALNFGGRLNGLV 230
Q+R P S R+N ++
Sbjct: 91 ----QIRH---------PVSHL--------------------------------RINRVM 105
Query: 231 DHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATI 290
+ +CFFA WFVV SS + +L+ LC+VFL F CI Y +P ++CA
Sbjct: 106 FRLRTIFECFFAGWFVVFFWVFVCSSSSLDHSSQLFWLCVVFLVFGCIRYVLPMVICAAT 165
Query: 291 CCCL 294
CCC+
Sbjct: 166 CCCV 169
>gi|4959044|gb|AAD34209.1|AF069992_1 LIM domain interacting RING finger protein [Mus musculus]
Length = 600
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + D+LR+L CSH FHV C+D+WL N++CP+C+ +
Sbjct: 545 TCSVCITEYTEGDKLRKLPCSHEFHVHCIDRWLSENSTCPICRRAV 590
>gi|431896218|gb|ELK05634.1| RING finger protein 165 [Pteropus alecto]
Length = 404
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G E G +
Sbjct: 292 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKEDGEESD 347
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 348 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 396
>gi|330792054|ref|XP_003284105.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
gi|325085919|gb|EGC39317.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
Length = 204
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
+L + D + GA E I+ LP + +++++ + L +G+ K+
Sbjct: 107 LLQLDNDITPHGGAKKEQIDLLPIHHIENQQDLD------------TFLNSGSSKDL--- 151
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ VC ICL ++V +D +R L C H +H DC++KWLKI + CP+CK E+
Sbjct: 152 -QQKVCSICLDEFVVNDLIRTLPCIHHYHSDCIEKWLKIKSVCPVCKYEV 200
>gi|297600709|ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group]
gi|108707430|gb|ABF95225.1| zinc finger family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|215765669|dbj|BAG87366.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674397|dbj|BAF11610.2| Os03g0272300 [Oryza sativa Japonica Group]
Length = 233
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 314 TAETINALPTYKFKSKKN-GNLNDQDNSGGTEGGV--LAAGTEKERMISGEDAV------ 364
+ E INALP +K+K + + G+ + + + G ++ V +G EK++ DA
Sbjct: 112 SEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLED 171
Query: 365 ---CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL + V D LR L C H FH +C+D WL+ +CP+CK + D
Sbjct: 172 ELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSD 221
>gi|357127649|ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 204
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
S+ RG A ++ALP ++ KK G D+ C +
Sbjct: 83 SRRRGLDASALSALPVTAYRKKKQERRAGASAG-----------------GGGPDSDCAV 125
Query: 368 CLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSAQ 422
CL++ D D++REL C HVFH++CVD WL+ +CPLC++E +S P+ A+
Sbjct: 126 CLSELADGDKVRELPNCGHVFHLECVDAWLRSRTTCPLCRAE-AESPGPMGNGEAE 180
>gi|194692670|gb|ACF80419.1| unknown [Zea mays]
gi|414866069|tpg|DAA44626.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 207
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 314 TAETINALPTYKFK----------SKKNG--NLNDQDNSGGTE---GGVLAAGTEKERMI 358
+ E IN+LP +K+K K +G L+ G E G+ A GT K
Sbjct: 82 SEEEINSLPVFKYKVQAQQRHPPARKSDGPSQLSVSSTGSGNEEKQDGLKADGTSKP--- 138
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
S ++ C +CL + D LR L C H FHV+C+D WL+ +CP+CK ++ D
Sbjct: 139 SEDELTCSVCLEQVTVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPICKHQVSD 191
>gi|242086104|ref|XP_002443477.1| hypothetical protein SORBIDRAFT_08g020130 [Sorghum bicolor]
gi|241944170|gb|EES17315.1| hypothetical protein SORBIDRAFT_08g020130 [Sorghum bicolor]
Length = 458
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +CL ++ D DELR L +C+H FH DC+D WL+ +ASCPLC++ +
Sbjct: 191 CAVCLLEFADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVA 237
>gi|347969289|ref|XP_003436399.1| AGAP013357-PA [Anopheles gambiae str. PEST]
gi|333468455|gb|EGK96956.1| AGAP013357-PA [Anopheles gambiae str. PEST]
Length = 2020
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 30/121 (24%)
Query: 295 PCIISVLG----IREDYSQTRGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVL 348
P ++S L + ED +RGA+ E I + P +K+K + + D+D
Sbjct: 1827 PSLLSSLNRFVRVMEDSCTSRGASQEMIETHTFP-HKYKRLRRASETDED---------- 1875
Query: 349 AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
+EK C ICL+++ D+++R L C H+FH DCVD+WL N CP+C+ +
Sbjct: 1876 ---SEK----------CTICLSQFEIDNDVRRLPCMHLFHKDCVDQWLVTNKHCPICRVD 1922
Query: 409 I 409
I
Sbjct: 1923 I 1923
>gi|218187179|gb|EEC69606.1| hypothetical protein OsI_38975 [Oryza sativa Indica Group]
Length = 440
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +CL ++ D DELR L +C+H FH DC+D WL+ +ASCPLC++ +
Sbjct: 184 CAVCLLEFADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVA 230
>gi|237839459|ref|XP_002369027.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211966691|gb|EEB01887.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|221483331|gb|EEE21650.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii GT1]
Length = 511
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
CCICL ++ D++ +REL CSH FH C+DKWL N CPLC I + P
Sbjct: 451 CCICLGEFADEEVIRELKCSHFFHHGCIDKWLLKNKQCPLCLRSIDEPFDP 501
>gi|357157250|ref|XP_003577735.1| PREDICTED: RING-H2 finger protein ATL65-like [Brachypodium
distachyon]
Length = 435
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CL ++ D DELR L +C+H FH DC+D WL+ +A+CPLC++ +
Sbjct: 184 CAVCLLEFADGDELRALPLCAHAFHADCIDVWLRAHATCPLCRAAV 229
>gi|255556167|ref|XP_002519118.1| ring finger protein, putative [Ricinus communis]
gi|223541781|gb|EEF43329.1| ring finger protein, putative [Ricinus communis]
Length = 402
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 27/107 (25%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
G I ALP + F + KNG K+ +I C +CL +
Sbjct: 124 GLDDSVIKALPLFLFTTTKNG---------------------KQSIIKD----CAVCLLE 158
Query: 372 YVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
+ ++D +R L +CSH FHVDC+D WL+ +A+CPLC++ I +SP V
Sbjct: 159 FEENDYVRTLPVCSHAFHVDCIDIWLRSHANCPLCRARIFQ-TSPFV 204
>gi|332025030|gb|EGI65217.1| E3 ubiquitin-protein ligase arkadia-C [Acromyrmex echinatior]
Length = 687
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 355 ERMISGEDAV--CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+++ +GEDA+ C ICL+++ D + +R L C H+FH+DCVD+WL N CP+C+ +I
Sbjct: 618 KKVENGEDAIEKCTICLSEFEDCERVRRLPCMHLFHIDCVDRWLCTNKRCPICRVDI 674
>gi|195157042|ref|XP_002019405.1| GL12252 [Drosophila persimilis]
gi|194115996|gb|EDW38039.1| GL12252 [Drosophila persimilis]
Length = 1345
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 38/134 (28%)
Query: 278 IGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI--NALPTYKFKSKKNGNLN 335
IG A P L + I V+G RGAT ETI N LP +K++ + + +
Sbjct: 1225 IGLATPLSLGSRI---------VIGAARP---NRGATLETIERNTLP-HKYRRLRRPSES 1271
Query: 336 DQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKW 395
D+D EK C ICL+ + ++++R L C H+FH DCVD+W
Sbjct: 1272 DED-------------AEK----------CAICLSLFEIENDVRRLPCMHLFHTDCVDQW 1308
Query: 396 LKINASCPLCKSEI 409
L N CP+C+ +I
Sbjct: 1309 LVTNKHCPICRVDI 1322
>gi|198454685|ref|XP_001359674.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
gi|198132908|gb|EAL28824.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
Length = 1343
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 38/134 (28%)
Query: 278 IGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI--NALPTYKFKSKKNGNLN 335
IG A P L + I V+G RGAT ETI N LP +K++ + + +
Sbjct: 1223 IGLATPLSLGSRI---------VIGAARP---NRGATLETIERNTLP-HKYRRLRRPSES 1269
Query: 336 DQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKW 395
D+D EK C ICL+ + ++++R L C H+FH DCVD+W
Sbjct: 1270 DED-------------AEK----------CAICLSLFEIENDVRRLPCMHLFHTDCVDQW 1306
Query: 396 LKINASCPLCKSEI 409
L N CP+C+ +I
Sbjct: 1307 LVTNKHCPICRVDI 1320
>gi|325179882|emb|CCA14284.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 48/219 (21%)
Query: 221 NFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIF--------GGHSSPSDAPKLYRLCIVF 272
N+ R L+ + L W ++GNVWIF H + L+ +
Sbjct: 130 NYHDRHAKLLKTIRFTLSLLELYWALMGNVWIFFSAGSTELDAHRCGDGSTTLHSVGFWL 189
Query: 273 LTFSCIGYAMPFILCATICCCLPCIISVLGIRED-YSQT-------RGATAETINALPTY 324
L + PF+ C I+ + G D Y + RGA E IN L
Sbjct: 190 LIVPYVCELTPFLYCLVS----YGIVQLTGWDLDEYVEQLTSAKLERGAKREIINQLTLR 245
Query: 325 KFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICS 384
F S D CCICL + ++++R L C+
Sbjct: 246 IFVPTN----------------------------STYDTSCCICLCDFELNEKIRLLPCN 277
Query: 385 HVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSAQH 423
H FH C+D+WL +NA+CP C+ I ++S + +A H
Sbjct: 278 HHFHSGCIDEWLGLNATCPTCRISIDETSLSKQKKTASH 316
>gi|440798067|gb|ELR19138.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 220 LNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIG 279
L+ G +G++ L+ + VW V G +W F + C++ +C
Sbjct: 142 LDIAGVYSGVL------LNVAWIVWLVFGCIWTFEESN-----------CVLEFLLNCAT 184
Query: 280 -----YAMPFILCATICCCLPCIISVLGIREDY--SQTRGATAETINALPTYKFKSKKNG 332
M L A I C + + +R D +RGAT I+ T + +
Sbjct: 185 MIEAHLVMVGTLVAVILCAASAMPVLYFVRPDLFNEPSRGATKSLIDRT-TKRTTYRPPA 243
Query: 333 NLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCV 392
+ +DN+ E E E E C ICL++YV +E+REL C H+FH +C
Sbjct: 244 QRSSRDNADNDEENKKEKEIENESEKVDEGESCAICLSEYVAGEEVRELGCGHMFHANCA 303
Query: 393 DKWLKINASCPLCKSEIGDSS 413
+ WL+ N +C C+ I ++
Sbjct: 304 EAWLQTNKTCAACRRPIDQAA 324
>gi|356548935|ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
Length = 247
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG + E I+ LPT K+K G+L + NSG C I
Sbjct: 163 TQSRGLSQELIDMLPTSKYKF---GSLFKRKNSG---------------------KRCVI 198
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C Y D+ +L CSHV+H +C+ KWL IN CP+C +E+
Sbjct: 199 CQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNTEV 240
>gi|224107873|ref|XP_002314635.1| predicted protein [Populus trichocarpa]
gi|222863675|gb|EEF00806.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 22/106 (20%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
++RG I ++P +KFK + N N + S C +C
Sbjct: 83 ESRGLDESVIRSIPVFKFKKEGNNVRNVGERSF---------------------CECAVC 121
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
L ++ + ++LR + CSHVFH+DC+D WL+ NA+CPLC++ I ++
Sbjct: 122 LNEFQEAEKLRRIPNCSHVFHIDCIDVWLQSNANCPLCRTSISSTT 167
>gi|307170860|gb|EFN62971.1| RING finger protein 165 [Camponotus floridanus]
Length = 709
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 355 ERMISGEDAV--CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+++ +GEDA+ C ICL+++ D + +R L C H+FH+DCVD+WL N CP+C+ +I
Sbjct: 641 KKVENGEDAIEKCTICLSEFEDCESVRRLPCMHLFHIDCVDRWLCTNKRCPICRVDI 697
>gi|298714587|emb|CBJ27578.1| similar to ring finger protein 167 isoform 1 [Ectocarpus
siliculosus]
Length = 431
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 316 ETINALPTYK-FKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG--EDAVCCICLAKY 372
E N LP ++ F SK G D D G G GTE G E+A C ICL +
Sbjct: 102 EQTNVLPKHRRFGSKLAGGGGDMDVEKGWGVGGPGKGTEPAAAGEGVEEEATCAICLCEE 161
Query: 373 VDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
D +LR L C H FH CVD WL + +CP CK +
Sbjct: 162 EDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPV 198
>gi|148231430|ref|NP_001087597.1| ring finger protein 167 precursor [Xenopus laevis]
gi|51513472|gb|AAH80409.1| MGC86297 protein [Xenopus laevis]
Length = 341
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 275 FSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRG--ATAETINALPTYKFKSKKNG 332
FS Y +PFI+ + + CI+ V+ + + R + E +N +P +KFK
Sbjct: 170 FSLGYYLIPFIVVVSAFIIIMCIVMVVRCVQYRKRMRRNRLSKEQLNKIPIHKFKKG--- 226
Query: 333 NLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCV 392
+D D VC ICL +Y + D+LR L CSH +H CV
Sbjct: 227 --DDYD-------------------------VCAICLEEYEEGDKLRVLPCSHAYHSSCV 259
Query: 393 DKWL-KINASCPLCKSEI 409
D WL K SCP+CK+ +
Sbjct: 260 DPWLTKTKKSCPVCKNRV 277
>gi|297613471|ref|NP_001067185.2| Os12g0596200 [Oryza sativa Japonica Group]
gi|77556398|gb|ABA99194.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|255670453|dbj|BAF30204.2| Os12g0596200 [Oryza sativa Japonica Group]
Length = 310
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +CL ++ D DELR L +C+H FH DC+D WL+ +ASCPLC++ +
Sbjct: 104 CAVCLLEFADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVA 150
>gi|170061533|ref|XP_001866274.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879738|gb|EDS43121.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 30/121 (24%)
Query: 295 PCIISVLG----IREDYSQTRGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVL 348
P ++S L + E+ RGAT E I N P +K+K + + D+D
Sbjct: 222 PSLLSSLNRFVRVIEENCTNRGATQEMIEHNTFP-HKYKRLRRASETDED---------- 270
Query: 349 AAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
+EK C ICL++++ +++R L C H+FH DCVD+WL N CP+C+ +
Sbjct: 271 ---SEK----------CTICLSQFIPQEDVRRLPCMHLFHKDCVDQWLVTNKHCPICRVD 317
Query: 409 I 409
I
Sbjct: 318 I 318
>gi|194744417|ref|XP_001954691.1| GF16619 [Drosophila ananassae]
gi|190627728|gb|EDV43252.1| GF16619 [Drosophila ananassae]
Length = 1226
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 38/134 (28%)
Query: 278 IGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI--NALPTYKFKSKKNGNLN 335
IG A P L + I P RGAT ETI N LP +K++ + +
Sbjct: 1104 IGLATPLSLGSRILIGPP------------RPNRGATLETIERNTLP-HKYRRVRRPSET 1150
Query: 336 DQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKW 395
D+D EK C ICL + ++++R L C H+FH DCVD+W
Sbjct: 1151 DED-------------AEK----------CAICLTLFEIENDVRRLPCMHLFHTDCVDQW 1187
Query: 396 LKINASCPLCKSEI 409
L N CP+C+ +I
Sbjct: 1188 LVTNKHCPICRVDI 1201
>gi|387597135|gb|EIJ94755.1| hypothetical protein NEPG_00279, partial [Nematocida parisii ERTm1]
Length = 263
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 46/178 (25%)
Query: 233 FKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICC 292
F LD + +G W+ HSS + P LY L +++ + I
Sbjct: 122 FNNLLDILTLFLYFIGFKWLQQYHSSKDEIPILYNLTRIWVFYG-------------IAI 168
Query: 293 CLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGT 352
L I SV+ I + R LP ++ T GG
Sbjct: 169 VLAPIFSVILILLLLNYVRPT-------LPVIEY----------------TLGG------ 199
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
I EDA C ICLA Y + +++R+L C H FH+ C+D+W I+ CPLCK I
Sbjct: 200 ----KIKEEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPIN 253
>gi|431920869|gb|ELK18640.1| Zinc/RING finger protein 3 [Pteropus alecto]
Length = 812
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 85 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 135
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK N G EG A T + C ICL KY+D +EL
Sbjct: 136 EKMETRKFNSK---------NKGRREGSCGALDTLSSSST----SDCAICLEKYIDGEEL 182
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 183 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 213
>gi|221507817|gb|EEE33404.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
CCICL ++ D++ +REL CSH FH C+DKWL N CPLC I + P
Sbjct: 302 CCICLGEFADEEVIRELKCSHFFHHGCIDKWLLKNKQCPLCLRSIDEPFDP 352
>gi|291229977|ref|XP_002734949.1| PREDICTED: ring finger protein 38-like [Saccoglossus kowalevskii]
Length = 561
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y++ + SG
Sbjct: 469 LAERLGEAKPRGLTKADIEQLPSYRYNPDTHQ--------------------------SG 502
Query: 361 EDAVCCI-CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
D CC+ C+ + LR L C+H FH CVDKWLK N +CP+C+++ + SS
Sbjct: 503 SDQTCCVVCMCDFEQRQLLRVLTCNHEFHTKCVDKWLKTNRTCPICRADASELSS 557
>gi|383856916|ref|XP_003703952.1| PREDICTED: uncharacterized protein LOC100880939 [Megachile
rotundata]
Length = 625
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 26/100 (26%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV--CCICL 369
GAT E+I + T+++K K+ +++ +GEDA+ C ICL
Sbjct: 538 GATQESIESH-TFRYKYKR-----------------------VKKVENGEDAIEKCTICL 573
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+++ D + +R L C H+FH+DCVD+WL N CP+C+ +I
Sbjct: 574 SEFEDCESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 613
>gi|355731010|gb|AES10385.1| zinc and ring finger 3 [Mustela putorius furo]
Length = 424
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLS----SSSTSDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|387593481|gb|EIJ88505.1| hypothetical protein NEQG_01195 [Nematocida parisii ERTm3]
Length = 259
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 46/178 (25%)
Query: 233 FKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICC 292
F LD + +G W+ HSS + P LY L +++ + I
Sbjct: 118 FNNLLDILTLFLYFIGFKWLQQYHSSKDEIPILYNLTRIWVFYG-------------IAI 164
Query: 293 CLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGT 352
L I SV+ I + R LP ++ T GG
Sbjct: 165 VLAPIFSVILILLLLNYVRPT-------LPVIEY----------------TLGG------ 195
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
I EDA C ICLA Y + +++R+L C H FH+ C+D+W I+ CPLCK I
Sbjct: 196 ----KIKEEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPIN 249
>gi|147901542|ref|NP_001090068.1| E3 ubiquitin-protein ligase ZNRF3 [Xenopus laevis]
gi|123904520|sp|Q4KLR8.1|ZNRF3_XENLA RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
gi|68534586|gb|AAH99029.1| MGC115570 protein [Xenopus laevis]
Length = 784
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 118 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLIKIKLKQRRSQNSMNRMAV-QAL 168
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFK+K G ++ + + GG + + S + C ICL KY+D +EL
Sbjct: 169 EKMETRKFKAK--GKVSREGSCGGLD-----------TLSSSSISDCAICLEKYIDGEEL 215
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL N +CP C+ I
Sbjct: 216 RVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 246
>gi|397498914|ref|XP_003820218.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Pan paniscus]
Length = 836
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCAALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|350397367|ref|XP_003484858.1| PREDICTED: hypothetical protein LOC100746954 [Bombus impatiens]
Length = 690
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + DQ N
Sbjct: 597 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH--QGDQTN--------------------- 633
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 634 ----CVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 680
>gi|51092240|gb|AAT94533.1| AT15166p [Drosophila melanogaster]
Length = 1256
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT ETI N LP +K++ + + D+D EK C IC
Sbjct: 1155 RGATLETIERNTLP-HKYRRVRRPSETDED-------------AEK----------CAIC 1190
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L + ++E+R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1191 LNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1231
>gi|21356709|ref|NP_650112.1| CG6923, isoform A [Drosophila melanogaster]
gi|24646071|ref|NP_731623.1| CG6923, isoform B [Drosophila melanogaster]
gi|386765608|ref|NP_001247056.1| CG6923, isoform C [Drosophila melanogaster]
gi|7299505|gb|AAF54693.1| CG6923, isoform A [Drosophila melanogaster]
gi|16197957|gb|AAL13749.1| LD22771p [Drosophila melanogaster]
gi|23171037|gb|AAN13524.1| CG6923, isoform B [Drosophila melanogaster]
gi|211938579|gb|ACJ13186.1| FI06048p [Drosophila melanogaster]
gi|220947268|gb|ACL86177.1| CG6923-PA [synthetic construct]
gi|220956714|gb|ACL90900.1| CG6923-PA [synthetic construct]
gi|383292652|gb|AFH06374.1| CG6923, isoform C [Drosophila melanogaster]
Length = 1256
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT ETI N LP +K++ + + D+D EK C IC
Sbjct: 1155 RGATLETIERNTLP-HKYRRVRRPSETDED-------------AEK----------CAIC 1190
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L + ++E+R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1191 LNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1231
>gi|356541117|ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
Length = 399
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
C +CL ++ DDD +R L ICSH FHVDC+D WL+ +A+CPLC++ + + SP
Sbjct: 138 CAVCLLEFEDDDYVRTLPICSHTFHVDCIDAWLRSHANCPLCRAGVLCTDSPFT 191
>gi|348581670|ref|XP_003476600.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Cavia porcellus]
Length = 396
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 37/142 (26%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 198 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPVHKFKK--------- 248
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 249 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 287
Query: 397 KINASCPLCKSEI----GDSSS 414
K +CP+CK ++ GD+ S
Sbjct: 288 KTKKTCPVCKQKVVPSQGDTDS 309
>gi|195329748|ref|XP_002031572.1| GM26076 [Drosophila sechellia]
gi|194120515|gb|EDW42558.1| GM26076 [Drosophila sechellia]
Length = 1257
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT ETI N LP +K++ + + D+D EK C IC
Sbjct: 1153 RGATLETIERNTLP-HKYRRIRRPSETDED-------------AEK----------CAIC 1188
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L + ++E+R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1189 LNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1229
>gi|118386887|ref|XP_001026561.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89308328|gb|EAS06316.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1280
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 316 ETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDA--VCCICLAKYV 373
E I LP K+ K + ND++N +E ++ GED +C ICL
Sbjct: 1186 EPIRNLPITKYTGKNSQENNDKNN--------------QESIVKGEDEEEICNICLENLN 1231
Query: 374 DDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
++ ELR L CSH +H C+DKWL SCP C+
Sbjct: 1232 NNQELRVLPCSHFYHTFCIDKWLLAKQSCPNCR 1264
>gi|340725904|ref|XP_003401304.1| PREDICTED: hypothetical protein LOC100651818 [Bombus terrestris]
Length = 691
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + DQ N
Sbjct: 598 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH--QGDQTN--------------------- 634
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 635 ----CVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 681
>gi|449271045|gb|EMC81660.1| RING finger protein 13 [Columba livia]
Length = 390
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRG--ATAETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + +P +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARKNRLRKDQLKKIPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E +L + E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -----GEWIILCLSRD-------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 281
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 282 KTKKTCPVCKQKV 294
>gi|442618623|ref|NP_001262484.1| CG6923, isoform D [Drosophila melanogaster]
gi|440217328|gb|AGB95866.1| CG6923, isoform D [Drosophila melanogaster]
Length = 1265
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT ETI N LP +K++ + + D+D EK C IC
Sbjct: 1155 RGATLETIERNTLP-HKYRRVRRPSETDED-------------AEK----------CAIC 1190
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L + ++E+R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1191 LNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1231
>gi|256818812|ref|NP_001157977.1| ring finger protein 165 [Rattus norvegicus]
gi|183985981|gb|AAI66566.1| Rnf165 protein [Rattus norvegicus]
Length = 348
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 236 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 291
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 292 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 340
>gi|395822968|ref|XP_003784773.1| PREDICTED: RING finger protein 165 [Otolemur garnettii]
Length = 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 235 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 290
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 291 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>gi|335305810|ref|XP_001924902.3| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 635
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
C IC+ +Y + +++R L CSH FH+ C+D+WL N++CP+C+ EI DS
Sbjct: 579 KACSICITEYTEGNKIRILPCSHEFHIHCIDRWLAENSTCPICRGEIVDS 628
>gi|380024410|ref|XP_003695990.1| PREDICTED: uncharacterized protein LOC100863582 [Apis florea]
Length = 692
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + DQ N
Sbjct: 599 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH--QGDQTN--------------------- 635
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 636 ----CVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 682
>gi|378755066|gb|EHY65093.1| hypothetical protein NERG_01539 [Nematocida sp. 1 ERTm2]
Length = 263
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 96/263 (36%), Gaps = 52/263 (19%)
Query: 149 SGCVATLPILYWRFRNRHQGIDSDSTQLRQGSSLPTPPEP-TSSYTAISANQASDEENNR 207
+ V L IL F+ GI+ + L + S TP + YTA+ A +
Sbjct: 42 TSFVRVLSILSVAFKLLQIGINVTALFLTRNSETQTPFKLFIIVYTALIAAHTTSFVIRH 101
Query: 208 STETETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYR 267
Q L F + F LD + +G W+ SS D P LY
Sbjct: 102 KRYI---FNQEPLEFSQSAESTL--FNNLLDILTLFLYFIGFKWLQQYQSSKDDIPILYN 156
Query: 268 LCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFK 327
L +++ + I L I SV+ I + R LP ++
Sbjct: 157 LTRIWVFYG-------------IAIVLAPIFSVILILLLLNYVRPT-------LPVIEYA 196
Query: 328 SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVF 387
GG I EDA C ICLA Y + +++R+L C H F
Sbjct: 197 V------------GGK--------------IKEEDAQCTICLAPYAEKEQIRKLPCKHHF 230
Query: 388 HVDCVDKWLKINASCPLCKSEIG 410
H+ C+D+W I+ CPLCK I
Sbjct: 231 HMTCIDEWFGIDDVCPLCKRPIN 253
>gi|256818810|ref|NP_001157976.1| RING finger protein 165 [Mus musculus]
gi|378523436|sp|E9QAU8.1|RN165_MOUSE RecName: Full=RING finger protein 165
Length = 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 235 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 290
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 291 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>gi|328779969|ref|XP_392089.3| PREDICTED: hypothetical protein LOC408543 isoform 1 [Apis
mellifera]
Length = 692
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + DQ N
Sbjct: 599 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH--QGDQTN--------------------- 635
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 636 ----CVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 682
>gi|308505926|ref|XP_003115146.1| CRE-TOE-4 protein [Caenorhabditis remanei]
gi|308259328|gb|EFP03281.1| CRE-TOE-4 protein [Caenorhabditis remanei]
Length = 503
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
ED C +CL+ + D + +R+L C+HVFH +C+ KWL IN CP+C+ +I
Sbjct: 446 EDDTCTVCLSNFEDGESIRKLPCNHVFHPECIYKWLDINKKCPMCREDI 494
>gi|432105127|gb|ELK31496.1| Zinc/RING finger protein 3 [Myotis davidii]
Length = 881
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 151 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 201
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK N G EG A T S C ICL KY+D +EL
Sbjct: 202 EKMETRKFNSK---------NKGRREGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 248
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 249 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 279
>gi|410988439|ref|XP_004000492.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Felis catus]
Length = 631
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 14/70 (20%)
Query: 344 EGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCP 403
EGG L A C IC+ +Y + ++LR L C+H FHV C+D+WL N++CP
Sbjct: 570 EGGALKA--------------CTICITEYTEGNKLRILPCTHEFHVHCIDRWLSENSTCP 615
Query: 404 LCKSEIGDSS 413
+C+ E+ S+
Sbjct: 616 ICRREVAGSA 625
>gi|354477745|ref|XP_003501079.1| PREDICTED: RING finger protein 165-like [Cricetulus griseus]
Length = 355
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 243 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 298
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 299 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 347
>gi|402883881|ref|XP_003905425.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 1 [Papio
anubis]
Length = 943
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 209 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 259
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 260 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 306
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 307 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337
>gi|307179492|gb|EFN67806.1| RING finger protein 44 [Camponotus floridanus]
Length = 705
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + G
Sbjct: 612 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH---------------------------QG 644
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 645 DQTNCVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 695
>gi|351705693|gb|EHB08612.1| RING finger protein 13 [Heterocephalus glaber]
Length = 381
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|326513864|dbj|BAJ87950.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG---DSSSPL 416
C +CL ++ D DELR L +C+H FH DC+D WL+ +ASCPLC++ + SSPL
Sbjct: 178 CAVCLLEFGDGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVALPPPVSSPL 233
>gi|297798050|ref|XP_002866909.1| ring-H2 finger protein ATL4O precursor [Arabidopsis lyrata subsp.
lyrata]
gi|297312745|gb|EFH43168.1| ring-H2 finger protein ATL4O precursor [Arabidopsis lyrata subsp.
lyrata]
Length = 323
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 323 TYKFKSKKNGNLNDQ---DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELR 379
T F+ + N + + + DN+ V A T KE I +D C ICL + D + +R
Sbjct: 79 TRYFRRRANDDCSRRGGLDNAVVESFPVFAYSTVKESKIGSKDLECAICLNELEDHETVR 138
Query: 380 EL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
L IC+H+FH+DC+D WL +A+CP+C+S +
Sbjct: 139 LLPICNHLFHIDCIDAWLYSHATCPVCRSNL 169
>gi|383851749|ref|XP_003701394.1| PREDICTED: uncharacterized protein LOC100882833 [Megachile
rotundata]
Length = 693
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + DQ N
Sbjct: 600 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH--QGDQTN--------------------- 636
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 637 ----CVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 683
>gi|380807725|gb|AFE75738.1| zinc/RING finger protein 3 isoform 1 precursor, partial [Macaca
mulatta]
Length = 329
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 75 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 125
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S + C ICL KY+D +EL
Sbjct: 126 EKMETRKFNSKSKGR---------REGSCGALDTLS----SSSTSDCAICLEKYIDGEEL 172
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI----GDSSSPLVQDS 420
R + C+H FH CVD WL + +CP C+ I G+ S+ V+ S
Sbjct: 173 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETS 218
>gi|297708536|ref|XP_002831020.1| PREDICTED: zinc/RING finger protein 3 [Pongo abelii]
Length = 833
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|296222604|ref|XP_002757254.1| PREDICTED: RING finger protein 165 [Callithrix jacchus]
Length = 346
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 234 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 289
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 290 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>gi|291394329|ref|XP_002713561.1| PREDICTED: ring finger protein 165 [Oryctolagus cuniculus]
Length = 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 235 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 290
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 291 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>gi|355755011|gb|EHH58878.1| RING finger protein 165, partial [Macaca fascicularis]
Length = 326
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 214 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 269
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 270 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 318
>gi|57165361|ref|NP_689683.2| RING finger protein 165 isoform 1 [Homo sapiens]
gi|114672999|ref|XP_529953.2| PREDICTED: RING finger protein 165 isoform 2 [Pan troglodytes]
gi|332236807|ref|XP_003267592.1| PREDICTED: RING finger protein 165 isoform 2 [Nomascus leucogenys]
gi|402903044|ref|XP_003914393.1| PREDICTED: RING finger protein 165 [Papio anubis]
gi|74762404|sp|Q6ZSG1.1|RN165_HUMAN RecName: Full=RING finger protein 165
gi|34534391|dbj|BAC86992.1| unnamed protein product [Homo sapiens]
gi|60738654|tpg|DAA05330.1| TPA_inf: putative ubiquitin ligase component [Homo sapiens]
Length = 346
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 234 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 289
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 290 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>gi|449449014|ref|XP_004142260.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
Length = 307
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 26/110 (23%)
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
I ++ RG TI ++P +K +N+ +GG
Sbjct: 73 ILRQQAEPRGLDPSTIQSIPLINYKKP----INETTTTGGE------------------- 109
Query: 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL ++ +++LR++ ICSH+FH+DC+D WL+ N++CPLC++ I +
Sbjct: 110 --CAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISN 157
>gi|340713250|ref|XP_003395158.1| PREDICTED: hypothetical protein LOC100651676 [Bombus terrestris]
Length = 631
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 29/140 (20%)
Query: 272 FLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKN 331
+ F +G P + L +S++ +R + + GAT E+I + T++ K K+
Sbjct: 507 MMPFPSLGLLHP---ARQMSVHLENYMSLVDLRRMAAISCGATQESIESH-TFRHKYKR- 561
Query: 332 GNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV--CCICLAKYVDDDELRELICSHVFHV 389
++++ + EDA+ C ICL+++ D + +R L C H+FH+
Sbjct: 562 ----------------------EKKVENSEDAIEKCTICLSEFEDCESVRRLPCMHLFHI 599
Query: 390 DCVDKWLKINASCPLCKSEI 409
DCVD+WL N CP+C+ +I
Sbjct: 600 DCVDQWLCTNKRCPICRVDI 619
>gi|355701932|gb|EHH29285.1| RING finger protein 165, partial [Macaca mulatta]
Length = 326
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 214 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 269
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 270 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 318
>gi|348576884|ref|XP_003474215.1| PREDICTED: RING finger protein 165-like [Cavia porcellus]
Length = 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 224 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 279
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 280 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 328
>gi|332801080|ref|NP_001193927.1| E3 ubiquitin-protein ligase ZNRF3 isoform 1 precursor [Homo
sapiens]
gi|126253847|sp|Q9ULT6.3|ZNRF3_HUMAN RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName: Full=RING
finger protein 203; AltName: Full=Zinc/RING finger
protein 3; Flags: Precursor
gi|119580172|gb|EAW59768.1| hCG40978, isoform CRA_b [Homo sapiens]
gi|119580173|gb|EAW59769.1| hCG40978, isoform CRA_b [Homo sapiens]
Length = 936
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 209 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 259
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 260 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 306
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 307 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337
>gi|444728898|gb|ELW69332.1| RING finger protein 165, partial [Tupaia chinensis]
Length = 327
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 215 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 270
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 271 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 319
>gi|357127651|ref|XP_003565492.1| PREDICTED: RING-H2 finger protein ATL1-like [Brachypodium
distachyon]
Length = 219
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 362 DAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSE 408
D+ C +CL++ D D++REL C HVFHVDCVD WL+ +CPLC++E
Sbjct: 113 DSDCAVCLSELTDGDKVRELPNCGHVFHVDCVDAWLRSTTTCPLCRAE 160
>gi|344271622|ref|XP_003407636.1| PREDICTED: hypothetical protein LOC100662830 [Loxodonta africana]
Length = 1066
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 977 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 1009
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 1010 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 1060
>gi|341875414|gb|EGT31349.1| hypothetical protein CAEBREN_03301 [Caenorhabditis brenneri]
Length = 449
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 354 KERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI--GD 411
K G++ C +CL + D++R+L C+H+FH C++KWL IN CP+C+ EI G+
Sbjct: 367 KYEKTEGDEETCTVCLTDFDTGDDVRKLRCNHMFHPGCIEKWLDINKKCPMCRKEIDKGE 426
Query: 412 SSSP 415
P
Sbjct: 427 GEEP 430
>gi|13195721|dbj|BAB33319.1| KIAA1133 protein [Homo sapiens]
Length = 891
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 164 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 214
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 215 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 261
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 262 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 292
>gi|407916974|gb|EKG10301.1| Zinc finger RING-type protein [Macrophomina phaseolina MS6]
Length = 723
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 342 GTEGGVLAAGTEKERMIS-GEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKIN 399
G G ++AA E MI+ D C +CL++Y D+E R+LI C H+FH +C+D+WL
Sbjct: 627 GEFGNLVAAAVEGNEMIAIPSDQRCLVCLSEYQRDEEARKLIKCGHLFHRECIDQWLTTG 686
Query: 400 A-SCPLCKSE 408
SCPLC+ +
Sbjct: 687 RNSCPLCRGQ 696
>gi|325180789|emb|CCA15199.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 522
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGN-----LNDQDNSGGTEGGVLAAGTEKERMISGED 362
S TRG + E + L K+K +++D S + G + ++ ++
Sbjct: 349 SNTRGVSQERMQQLEILKYKKPVKSVDPACVHHNKDVSVSSHVGSIQIPI----CLNFDE 404
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
VC ICL ++ +++ +R+L C+H+FHV C+D+WL+ N +CP+CK
Sbjct: 405 DVCPICLVEFEEEENVRKLNCTHIFHVPCIDEWLRRNVTCPMCK 448
>gi|426393971|ref|XP_004063277.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 1 [Gorilla
gorilla gorilla]
gi|426393973|ref|XP_004063278.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Gorilla
gorilla gorilla]
Length = 838
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|432094725|gb|ELK26205.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 795
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
VC IC+ +Y + ++LR L CSH +HV C+D+WL N++CP+C+ E+
Sbjct: 746 VCIICITEYTEGNKLRILPCSHEYHVHCIDRWLSDNSTCPICRREV 791
>gi|28573149|ref|NP_731367.2| murashka, isoform C [Drosophila melanogaster]
gi|28381204|gb|AAF54394.4| murashka, isoform C [Drosophila melanogaster]
gi|317008637|gb|ADU79246.1| GH10160p [Drosophila melanogaster]
Length = 1173
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 1040 LAERLGEAKPRGLTRNEIDQLPSYKFNPE---------------------------VHNG 1072
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 1073 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 1123
>gi|403295171|ref|XP_003938526.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Saimiri boliviensis
boliviensis]
Length = 833
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|402883883|ref|XP_003905426.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Papio
anubis]
Length = 843
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|150378447|ref|NP_115549.2| E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Homo sapiens]
gi|47678325|emb|CAG30283.1| bK175E3.6 [Homo sapiens]
gi|109451050|emb|CAK54386.1| ZNRF3 [synthetic construct]
gi|109451628|emb|CAK54685.1| ZNRF3 [synthetic construct]
gi|168269698|dbj|BAG09976.1| zinc/RING finger protein 3 precursor [synthetic construct]
gi|189442382|gb|AAI67805.1| Zinc and ring finger 3 [synthetic construct]
Length = 836
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|322780920|gb|EFZ10132.1| hypothetical protein SINV_09125 [Solenopsis invicta]
Length = 611
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + G
Sbjct: 518 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH---------------------------QG 550
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 551 DQTNCVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 601
>gi|56758082|gb|AAW27181.1| SJCHGC07006 protein [Schistosoma japonicum]
Length = 247
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNL-NDQDNSGGTEGGVLAAGTEKERMIS 359
L ++ + + RG + + + +LP + K L +D+ S E T + +S
Sbjct: 137 LAVQLESNNGRGLSKDELESLPIRLYTLKSPNRLPDDKQKSSFDETQT----TNAQNYLS 192
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
D C ICL YV+ ++R++ C H FH CVDKWLK +CPLC+++
Sbjct: 193 ECDR-CMICLDDYVESQQIRQMRCLHEFHASCVDKWLKTKRTCPLCRAD 240
>gi|332017238|gb|EGI58021.1| RING finger protein 38 [Acromyrmex echinatior]
Length = 608
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + G
Sbjct: 516 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH---------------------------QG 548
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 549 DQTNCVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 599
>gi|224061170|ref|XP_002189845.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Taeniopygia guttata]
Length = 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 39/151 (25%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI----GDSSSPLVQDSAQH 423
K +CP+CK ++ GDS S DS+Q
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDSE--TDSSQE 301
>gi|149029497|gb|EDL84711.1| similar to ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 281
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 169 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 224
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 225 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 273
>gi|297826973|ref|XP_002881369.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327208|gb|EFH57628.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 377
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
+R S RG AE I + PT+ + K + GG E
Sbjct: 96 VRIRRSTARGLEAEAIESFPTFLYSEVKAVRIG----KGGVE------------------ 133
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CL ++ DD+ LR + C HVFHVDCVD WL +++CPLC++++
Sbjct: 134 --CAVCLCEFEDDETLRLMPPCCHVFHVDCVDVWLSEHSTCPLCRADL 179
>gi|344248155|gb|EGW04259.1| RING finger protein 165 [Cricetulus griseus]
Length = 280
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 168 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 223
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 224 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|114685663|ref|XP_515054.2| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 2 [Pan
troglodytes]
gi|410055753|ref|XP_003953908.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 isoform 1 [Pan
troglodytes]
Length = 836
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|193788386|dbj|BAG53280.1| unnamed protein product [Homo sapiens]
Length = 836
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|355563554|gb|EHH20116.1| hypothetical protein EGK_02907 [Macaca mulatta]
Length = 843
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|297826971|ref|XP_002881368.1| hypothetical protein ARALYDRAFT_902595 [Arabidopsis lyrata subsp.
lyrata]
gi|297327207|gb|EFH57627.1| hypothetical protein ARALYDRAFT_902595 [Arabidopsis lyrata subsp.
lyrata]
Length = 696
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
+R S RG AE I + PT+ + K + GG E
Sbjct: 96 VRIRRSTARGLEAEAIESFPTFLYSEVKAVRIG----KGGVE------------------ 133
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CL ++ DD+ LR + C HVFHVDCVD WL +++CPLC++++
Sbjct: 134 --CAVCLCEFEDDETLRLMPPCCHVFHVDCVDVWLSEHSTCPLCRADL 179
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 25/107 (23%)
Query: 304 REDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDA 363
R + RG IN+ PT+ + K ER I
Sbjct: 438 RTSITAARGLDEAIINSFPTFLYSEVK------------------------ERRIGIGGV 473
Query: 364 VCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ ++ D + LR + C HVFHVDCV WL +++CPLC+ ++
Sbjct: 474 ECAVCICEFEDHETLRLMPECCHVFHVDCVSVWLSDHSTCPLCRVDL 520
>gi|45382515|ref|NP_990686.1| E3 ubiquitin-protein ligase RNF13 precursor [Gallus gallus]
gi|21362882|sp|Q90972.1|RNF13_CHICK RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName:
Full=C-RZF; AltName: Full=RING finger protein 13; Flags:
Precursor
gi|1321818|emb|CAA64725.1| RING zinc finger protein [Gallus gallus]
gi|60116919|gb|AAX14391.1| RING finger protein 13 [Gallus gallus]
gi|1589724|prf||2211437A RING finger protein
Length = 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 39/151 (25%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI----GDSSSPLVQDSAQH 423
K +CP+CK ++ GDS S DS+Q
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDSE--TDSSQE 301
>gi|432848440|ref|XP_004066346.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 712
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N++ +
Sbjct: 623 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNRQS--------------------- 655
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 656 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 706
>gi|148677515|gb|EDL09462.1| mCG18269 [Mus musculus]
Length = 280
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 168 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 223
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 224 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|326521562|dbj|BAK00357.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 359 SGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSE 408
S A C +CL++ VD D +R+L C HVFHV+CVD WL+ SCPLC++E
Sbjct: 115 SAAGADCAVCLSELVDGDTVRQLPNCGHVFHVECVDAWLRTRTSCPLCRAE 165
>gi|145532471|ref|XP_001451991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419668|emb|CAK84594.1| unnamed protein product [Paramecium tetraurelia]
Length = 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 250 VWIFGGHSSPSDAPKLYRLC--------IVFLTFSCIGYAMPFILCATICCCLPCIISVL 301
VW + P+LY C IVFL + Y +++ I CLP II V+
Sbjct: 83 VWALRLQMLNPEDPELYHACFRHVITFQIVFLFLTMYQYLEVYMVSLLIVICLPFIIPVM 142
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGE 361
+KFK KK N Q + + +EK I G
Sbjct: 143 L--------------------WHKFKQKKKNYDNQQSLNELKKTCKTLYHSEK---IQG- 178
Query: 362 DAVCCICLAKYVDDDELRELIC--SHVFHVDCVDKWLKINASCPLCKS 407
D C IC+ YV D+EL L C H FH+ C+ WL IN++CP C++
Sbjct: 179 DQECGICMHVYVTDEELLILPCDPKHHFHLHCIQAWLLINSTCPKCRA 226
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 43/156 (27%)
Query: 254 GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGA 313
GG S PS +R + F ++PF+ A L +D Q RG
Sbjct: 481 GGPSGPSRRDGRHRAPVAFDESG----SLPFLSLAQF---------FLLNEDDEDQPRGL 527
Query: 314 TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYV 373
T E I+ L F E L C +C+ +Y
Sbjct: 528 TKEQIDNLAMRSFG----------------ENDALK--------------TCSVCITEYT 557
Query: 374 DDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 558 EGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 593
>gi|149568981|ref|XP_001517302.1| PREDICTED: RING finger protein 38, partial [Ornithorhynchus
anatinus]
Length = 460
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F S +
Sbjct: 371 LAERLGEAKPRGLTKADIEQLPSYRFNSNNH---------------------------QS 403
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L CSH FH CVDKWLK N +CP+C+++ +
Sbjct: 404 EQTLCVVCMCDFESRQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASE 454
>gi|307210670|gb|EFN87093.1| RING finger protein 44 [Harpegnathos saltator]
Length = 641
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T + LP+YKF ++ + DQ N
Sbjct: 548 LAERLGEAKPRGLTRAEVEQLPSYKFNAETH--QGDQTN--------------------- 584
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +C+ + LR L CSH FH C+DKWLK N +CP+C+ + G+
Sbjct: 585 ----CVVCMCDFEALQSLRVLPCSHEFHSKCIDKWLKSNRTCPICRGDAGE 631
>gi|449454614|ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 203
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 273 LTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG 332
L + IG+ M +C + C + R A + T P Y+ +S+ +
Sbjct: 8 LITTVIGFGMSATFIVFVCTRIIC-----------GRLRSAQSNT----PNYEIESRLDL 52
Query: 333 NLNDQDNSGGTEGGVLAA----GTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVF 387
+ + G E ++AA ++E S EDA C ICL +Y + + LR + C H F
Sbjct: 53 EQQPESRASGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSF 112
Query: 388 HVDCVDKWLKINASCPLCKSEIGDS 412
H+ C+D WL+ ++CP+C+ + DS
Sbjct: 113 HLTCIDVWLRKQSTCPVCRLPLQDS 137
>gi|149720303|ref|XP_001499538.1| PREDICTED: zinc/RING finger protein 3 [Equus caballus]
Length = 838
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|195499458|ref|XP_002096956.1| GE24768 [Drosophila yakuba]
gi|194183057|gb|EDW96668.1| GE24768 [Drosophila yakuba]
Length = 1040
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 907 LAERLGEAKPRGLTRNEIDQLPSYKFNPE---------------------------VHNG 939
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 940 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 990
>gi|414877903|tpg|DAA55034.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 414
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +CL ++ D DELR L C+H FH DC+D WL+ +ASCPLC++ +
Sbjct: 179 CAVCLLEFADGDELRTLPHCAHAFHADCIDVWLRAHASCPLCRAAVA 225
>gi|221110595|ref|XP_002160653.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like, partial [Hydra
magnipapillata]
Length = 359
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 27/103 (26%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG + ++ +P+++F + GT KE ++ C +
Sbjct: 278 AKLRGLSKTELDTIPSFRF----------------------STGTAKE-----TNSKCVV 310
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C+++YV+ ++LR L C+H FH C+DKWL+ N +CP+C+ ++
Sbjct: 311 CMSEYVNREKLRRLPCTHDFHSKCIDKWLRSNRTCPVCRDDVK 353
>gi|348521174|ref|XP_003448101.1| PREDICTED: RING finger protein 38-like [Oreochromis niloticus]
Length = 742
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 653 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 685
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 686 EQTLCVVCMCDFESRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 736
>gi|414868792|tpg|DAA47349.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 398
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
C +CL ++ DELR L +C+H FH DC+D WL+ +ASCPLC++ + P+
Sbjct: 150 CAVCLLEFAGGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVALLPPPVA 203
>gi|237830951|ref|XP_002364773.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|211962437|gb|EEA97632.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|221507652|gb|EEE33256.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 1542
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 318 INALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDE 377
I+ LPT F ++ NL+D E C IC Y DE
Sbjct: 1470 IDLLPTSAFDQSRSANLSD------------------------EAKRCSICFEDYEHADE 1505
Query: 378 LRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
LR L C+HVFH +C+D WL+ + CP+CK ++
Sbjct: 1506 LRRLPCTHVFHKNCIDVWLRRSFVCPICKHDL 1537
>gi|326926239|ref|XP_003209310.1| PREDICTED: e3 ubiquitin-protein ligase RNF13-like [Meleagris
gallopavo]
Length = 381
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 39/151 (25%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI----GDSSSPLVQDSAQH 423
K +CP+CK ++ GDS S DS+Q
Sbjct: 273 KTKKTCPVCKQKVVPSQGDSDSE--TDSSQE 301
>gi|348512116|ref|XP_003443589.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oreochromis
niloticus]
Length = 772
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +YV ++LR L CSH FHV C+D+WL N +CP+C+ I
Sbjct: 721 ACSVCINEYVQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPI 766
>gi|426247840|ref|XP_004017684.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Ovis aries]
Length = 617
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 182 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 232
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 233 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 279
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 280 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 310
>gi|224104393|ref|XP_002313422.1| predicted protein [Populus trichocarpa]
gi|222849830|gb|EEE87377.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 308 SQTRGATAETINALPTYKFKS--KKNGNLNDQ---DNSGGTEGGVLAAGTEKERMISGED 362
+ T T E INALP +K+K ++NG+ + Q +S E + + S ++
Sbjct: 151 ASTTSMTEEEINALPVHKYKVPVQENGSASLQHASSSSAPAETKQDSKNADGNMKTSEDE 210
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C ICL + + +R L C H FH +C+D WL+ +CP+CK IG
Sbjct: 211 LTCTICLEQVNRGELVRSLPCLHQFHTNCIDPWLRQQGTCPVCKFLIG 258
>gi|355784877|gb|EHH65728.1| hypothetical protein EGM_02555, partial [Macaca fascicularis]
Length = 732
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 38 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 88
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 89 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 135
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 136 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 166
>gi|441618929|ref|XP_004092942.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ZNRF3
[Nomascus leucogenys]
Length = 837
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|24645397|ref|NP_649902.2| murashka, isoform A [Drosophila melanogaster]
gi|24645399|ref|NP_731366.1| murashka, isoform B [Drosophila melanogaster]
gi|20151609|gb|AAM11164.1| LD30050p [Drosophila melanogaster]
gi|23170810|gb|AAN13432.1| murashka, isoform A [Drosophila melanogaster]
gi|23170811|gb|AAN13433.1| murashka, isoform B [Drosophila melanogaster]
gi|220947288|gb|ACL86187.1| mura-PA [synthetic construct]
gi|220956746|gb|ACL90916.1| mura-PA [synthetic construct]
Length = 868
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 735 LAERLGEAKPRGLTRNEIDQLPSYKFNPE---------------------------VHNG 767
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 768 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 818
>gi|301611422|ref|XP_002935238.1| PREDICTED: hypothetical protein LOC100491274 [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 23/141 (16%)
Query: 271 VFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQ--TRGATAETINALPTYKFKS 328
+++ + G M F+L A ++ L R+ Q + T I+ L T +++
Sbjct: 193 IWILLTVAGTVMFFVLYA---------VARLLCRQPPPQDSIQQQTLLAISRLGTRRYQQ 243
Query: 329 KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFH 388
+ L DQ SGG V A T S VC ICL ++ D ELR L C H +H
Sbjct: 244 RM---LKDQRASGG---WVETAST------SSSVPVCAICLEEFTDGQELRILPCCHEYH 291
Query: 389 VDCVDKWLKINASCPLCKSEI 409
+ CVD WL+ N +CPLC +I
Sbjct: 292 LGCVDPWLRQNHTCPLCMYDI 312
>gi|224084358|ref|XP_002307271.1| predicted protein [Populus trichocarpa]
gi|222856720|gb|EEE94267.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
S ED CCIC +Y D+D+L +L C H FH +C+ KWL +CP+CK
Sbjct: 597 SSEDEPCCICQEEYADEDDLGKLKCGHDFHFNCIKKWLVQKNNCPICK 644
>gi|195572254|ref|XP_002104111.1| GD20788 [Drosophila simulans]
gi|194200038|gb|EDX13614.1| GD20788 [Drosophila simulans]
Length = 877
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 744 LAERLGEAKPRGLTRNEIDQLPSYKFNPE---------------------------VHNG 776
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 777 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 827
>gi|326914309|ref|XP_003203468.1| PREDICTED: e3 ubiquitin-protein ligase RNF6-like [Meleagris
gallopavo]
Length = 744
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 26/104 (25%)
Query: 306 DYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVC 365
+Y + RG T E I+ L T + G+++ TEG + C
Sbjct: 658 EYRRLRGLTKEQIDNLSTRNY-----GDIH-------TEGEI--------------SKTC 691
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C+ +YV ++LR+L C H FH+ C+D+WL N++CP+C+ +
Sbjct: 692 SVCINEYVAGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPV 735
>gi|195330386|ref|XP_002031885.1| GM26248 [Drosophila sechellia]
gi|194120828|gb|EDW42871.1| GM26248 [Drosophila sechellia]
Length = 872
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 739 LAERLGEAKPRGLTRNEIDQLPSYKFNPE---------------------------VHNG 771
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 772 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 822
>gi|449433159|ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
gi|449487638|ref|XP_004157726.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
Length = 339
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 356 RMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
R S A C +CL+K+ +D+LR L +C H FH CVD WL+ N SCPLC+S I S S
Sbjct: 121 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 180
Query: 415 PLVQDS 420
+++ S
Sbjct: 181 DVMKAS 186
>gi|403265414|ref|XP_003924935.1| PREDICTED: RING finger protein 165 [Saimiri boliviensis
boliviensis]
Length = 400
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 288 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 343
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 344 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 392
>gi|351707128|gb|EHB10047.1| RING finger protein 165 [Heterocephalus glaber]
Length = 280
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 168 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 223
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 224 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 272
>gi|359475158|ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like [Vitis vinifera]
Length = 396
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
C +CL ++ D+D +R L +CSH FHVDC+D WL+ +A+CPLC++ I SP +
Sbjct: 155 CAVCLLEFEDNDCVRVLPVCSHAFHVDCIDIWLRSHANCPLCRAGIFRHESPFI 208
>gi|194903083|ref|XP_001980810.1| GG17363 [Drosophila erecta]
gi|190652513|gb|EDV49768.1| GG17363 [Drosophila erecta]
Length = 887
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 754 LAERLGEAKPRGLTRNEIDQLPSYKFNPE---------------------------VHNG 786
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 787 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 837
>gi|397520252|ref|XP_003830238.1| PREDICTED: RING finger protein 165 [Pan paniscus]
Length = 279
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 167 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 222
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 223 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 271
>gi|73995396|ref|XP_543465.2| PREDICTED: zinc/RING finger protein 3 [Canis lupus familiaris]
Length = 842
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|297260803|ref|XP_001103574.2| PREDICTED: zinc/RING finger protein 3-like [Macaca mulatta]
Length = 797
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 78 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 128
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T + C ICL KY+D +EL
Sbjct: 129 EKMETRKFNSKSKGR---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 175
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 176 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 206
>gi|449521954|ref|XP_004167994.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL16-like
[Cucumis sativus]
Length = 307
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 26/110 (23%)
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
I ++ RG TI ++P +K+ N + +GG
Sbjct: 73 ILRQQAEPRGLDPSTIQSIPLINYKNPXN----ETTTTGGE------------------- 109
Query: 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL ++ +++LR++ ICSH+FH+DC+D WL+ N++CPLC++ I +
Sbjct: 110 --CAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISN 157
>gi|311270846|ref|XP_001925877.2| PREDICTED: zinc/RING finger protein 3 [Sus scrofa]
Length = 815
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 40/156 (25%)
Query: 254 GGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGA 313
G + S S A + R +TF G ++PF+ A L +D Q RG
Sbjct: 514 GSNVSTSSARREGRNSRGGVTFEESG-SLPFLSLAQF---------FLLNEDDDDQPRGL 563
Query: 314 TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYV 373
T E I+ L T F E L C +C+ +Y
Sbjct: 564 TKEQIDNLSTRNFG----------------ENDALK--------------TCSVCITEYT 593
Query: 374 DDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 594 EGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 629
>gi|395834038|ref|XP_003790023.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Otolemur garnettii]
Length = 949
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 224 PLRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 274
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G+ EG A T + C ICL KY+D +EL
Sbjct: 275 EKMETRKFNSKSKGH---------REGSCGALDTLSSSST----SDCAICLEKYIDGEEL 321
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 322 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 352
>gi|119621879|gb|EAX01474.1| ring finger protein 165, isoform CRA_a [Homo sapiens]
Length = 262
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICL 369
TRGA TI T+ K KK QD G + G + EK C ICL
Sbjct: 169 TRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESDTDEK----------CTICL 214
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 215 SMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 254
>gi|449018124|dbj|BAM81526.1| similar to ring zinc finger protein [Cyanidioschyzon merolae strain
10D]
Length = 708
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
+ ER I+ C +CL + D D +R + C H+FH DC+D WL+ + +CP+C+ +
Sbjct: 552 DPERSIAYSSITCPVCLEDFADGDRVRRVGCHHLFHTDCIDPWLRKHPACPVCREDF--- 608
Query: 413 SSPLVQDSA 421
SPL+++ A
Sbjct: 609 -SPLLRNHA 616
>gi|356511447|ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
max]
Length = 582
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E R++ D C ICL++Y + LR + C+H FH DC+D+WL++NA+CPLC++
Sbjct: 324 ESGRLLKPNDNTCAICLSEYQPKETLRSIPECNHYFHADCIDEWLRLNATCPLCRNSPEA 383
Query: 412 SSS 414
SS+
Sbjct: 384 SST 386
>gi|343172290|gb|AEL98849.1| putative ligase, partial [Silene latifolia]
Length = 238
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG + E I LPT ++K+ GG + +ER C I
Sbjct: 159 TQSRGLSQELIKQLPTSRYKA----------------GGFFSRKKSRER--------CVI 194
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CL Y D+ L C HV+H C KWL IN +CP+C E+
Sbjct: 195 CLVTYKMGDQQMTLPCKHVYHSKCGRKWLSINKTCPVCNYEV 236
>gi|119621880|gb|EAX01475.1| ring finger protein 165, isoform CRA_b [Homo sapiens]
Length = 260
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 148 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 203
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 204 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 252
>gi|125542426|gb|EAY88565.1| hypothetical protein OsI_10038 [Oryza sativa Indica Group]
Length = 290
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 336 DQDNSGGTEGGVLAA--GTEKERMISGEDAV---CCICLAKYVDDDELRELI-CSHVFHV 389
+ + GG + V+AA + R SG+ A C +CL+++V D+ L+ L CSH FH+
Sbjct: 78 EAEVGGGLDPDVVAALPVVKYRRAASGKSASPQECAVCLSEFVRDERLKLLPSCSHAFHI 137
Query: 390 DCVDKWLKINASCPLCKSEI-GDSSSPLVQD 419
DC+D WL N SCPLC++ + G + LV+D
Sbjct: 138 DCIDTWLHHNVSCPLCRTVVTGGAIGLLVRD 168
>gi|27261477|gb|AAN87743.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|125584934|gb|EAZ25598.1| hypothetical protein OsJ_09425 [Oryza sativa Japonica Group]
Length = 290
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 336 DQDNSGGTEGGVLAA--GTEKERMISGEDAV---CCICLAKYVDDDELRELI-CSHVFHV 389
+ + GG + V+AA + R SG+ A C +CL+++V D+ L+ L CSH FH+
Sbjct: 78 EAEVGGGLDPDVVAALPVVKYRRAASGKSASPQECAVCLSEFVRDERLKLLPSCSHAFHI 137
Query: 390 DCVDKWLKINASCPLCKSEI-GDSSSPLVQD 419
DC+D WL N SCPLC++ + G + LV+D
Sbjct: 138 DCIDTWLHHNVSCPLCRTVVTGGAIGLLVRD 168
>gi|79502509|ref|NP_568080.2| RING-H2 finger protein ATL32 [Arabidopsis thaliana]
gi|302393822|sp|Q8W571.3|ATL32_ARATH RecName: Full=RING-H2 finger protein ATL32; Flags: Precursor
gi|332661764|gb|AEE87164.1| RING-H2 finger protein ATL32 [Arabidopsis thaliana]
Length = 323
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 328 SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHV 386
S + G L DN+ V A + KE I +D C ICL + D + +R L IC+H+
Sbjct: 90 SSRRGGL---DNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHL 146
Query: 387 FHVDCVDKWLKINASCPLCKSEI-GDSSSPLVQD 419
FH+DC+D WL +A+CP+C+S + S+ P +D
Sbjct: 147 FHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDED 180
>gi|343172292|gb|AEL98850.1| putative ligase, partial [Silene latifolia]
Length = 238
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG + E I LPT ++K+ GG + +ER C I
Sbjct: 159 TQSRGLSQELIKQLPTSRYKA----------------GGFFSRKKSRER--------CVI 194
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CL Y D+ L C HV+H C KWL IN +CP+C E+
Sbjct: 195 CLVTYKMGDQQMTLPCKHVYHSKCGRKWLSINKTCPVCNYEV 236
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 564 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 609
>gi|147775862|emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
Length = 419
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 24/102 (23%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
++RG I ++P ++F+ GG E G ER C +C
Sbjct: 165 ESRGLDESVIRSIPIFQFR-----------KGGGREFG--------ER----SHCECAVC 201
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
L ++ ++++LR + CSH+FH+DC+D WL+ NA+CPLC++ I
Sbjct: 202 LNEFQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSI 243
>gi|395510609|ref|XP_003759566.1| PREDICTED: RING finger protein 165 [Sarcophilus harrisii]
Length = 347
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + +RGA TI T+ K KK Q+ G E G +
Sbjct: 235 AVRESYEELLQLEDRLGSVSRGAVQNTIERF-TFPHKYKKR---RPQEGKGKKEDGEESD 290
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 291 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>gi|401412029|ref|XP_003885462.1| Proteophosphoglycan ppg4, related [Neospora caninum Liverpool]
gi|325119881|emb|CBZ55434.1| Proteophosphoglycan ppg4, related [Neospora caninum Liverpool]
Length = 1822
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 318 INALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDE 377
I+ LPT +F ++ NL+D E C IC Y +E
Sbjct: 1750 IDLLPTSEFDQSRSANLSD------------------------EAKRCSICFEDYDHGEE 1785
Query: 378 LRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
LR L C+HVFH +C+D WL+ + CP+CK ++
Sbjct: 1786 LRRLPCTHVFHKNCIDMWLRRSFVCPICKHDL 1817
>gi|281344904|gb|EFB20488.1| hypothetical protein PANDA_021707 [Ailuropoda melanoleuca]
Length = 612
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
C IC+ +Y + + LR L CSH FHV C+D+WL N++CPLC+ + DS
Sbjct: 558 KACTICITEYTEGNRLRILPCSHEFHVHCIDRWLSENSTCPLCRGKAVDS 607
>gi|115450747|ref|NP_001048974.1| Os03g0149800 [Oryza sativa Japonica Group]
gi|108706206|gb|ABF94001.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113547445|dbj|BAF10888.1| Os03g0149800 [Oryza sativa Japonica Group]
gi|215766636|dbj|BAG98715.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 336 DQDNSGGTEGGVLAA--GTEKERMISGEDAV---CCICLAKYVDDDELRELI-CSHVFHV 389
+ + GG + V+AA + R SG+ A C +CL+++V D+ L+ L CSH FH+
Sbjct: 88 EAEVGGGLDPDVVAALPVVKYRRAASGKSASPQECAVCLSEFVRDERLKLLPSCSHAFHI 147
Query: 390 DCVDKWLKINASCPLCKSEI-GDSSSPLVQD 419
DC+D WL N SCPLC++ + G + LV+D
Sbjct: 148 DCIDTWLHHNVSCPLCRTVVTGGAIGLLVRD 178
>gi|5918310|emb|CAB38920.2| putative protein [Arabidopsis thaliana]
gi|7271062|emb|CAB80670.1| putative protein [Arabidopsis thaliana]
Length = 322
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 328 SKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHV 386
S + G L DN+ V A + KE I +D C ICL + D + +R L IC+H+
Sbjct: 89 SSRRGGL---DNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHL 145
Query: 387 FHVDCVDKWLKINASCPLCKSEI 409
FH+DC+D WL +A+CP+C+S +
Sbjct: 146 FHIDCIDTWLYSHATCPVCRSNL 168
>gi|298711205|emb|CBJ32426.1| ring finger protein [Ectocarpus siliculosus]
Length = 203
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%)
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
GED C +C Y +DDELR L CSH FH +CVD WL+ N CP C+ +
Sbjct: 150 GEDTKCLVCQCDYEEDDELRILPCSHTFHTECVDGWLEENEECPTCRRSV 199
>gi|301792106|ref|XP_002931020.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
Length = 614
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
C IC+ +Y + + LR L CSH FHV C+D+WL N++CPLC+ + DS
Sbjct: 558 KACTICITEYTEGNRLRILPCSHEFHVHCIDRWLSENSTCPLCRGKAVDS 607
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 540 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 585
>gi|348516749|ref|XP_003445900.1| PREDICTED: RING finger protein 44-like [Oreochromis niloticus]
Length = 440
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F S+ +
Sbjct: 351 LAERLGEAKPRGLTKADIEQLPSYRFNSENH---------------------------LS 383
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ D
Sbjct: 384 EQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASD 434
>gi|326506552|dbj|BAJ86594.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGG--TEGGVLAAGTEKERMISGEDAVCCICL 369
G + E I ALPT+ ++++ + Q + GG + GG +G++ S E C +CL
Sbjct: 72 GLSLEDIAALPTFTYRARAAPTPSPQGSWGGCRSGGGKRRSGSKGRPATSVE---CVVCL 128
Query: 370 AKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKS 407
+ D D +R L C H FH C+D WL ++SCP+C++
Sbjct: 129 QELEDGDVVRVLPACRHFFHSSCIDTWLCAHSSCPVCRA 167
>gi|255645317|gb|ACU23155.1| unknown [Glycine max]
Length = 247
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG + E I+ LPT K+K G+L + N G C I
Sbjct: 163 TQSRGLSQELIDMLPTSKYKF---GSLFKRKNFG---------------------KRCVI 198
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C Y D+ +L CSHV+H +C+ KWL IN CP+C +E+
Sbjct: 199 CQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNTEV 240
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 552 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 597
>gi|301767068|ref|XP_002918936.1| PREDICTED: RING finger protein 38-like [Ailuropoda melanoleuca]
Length = 572
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 483 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 515
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 516 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 566
>gi|410976828|ref|XP_003994815.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3 [Felis catus]
Length = 841
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|301133572|gb|ADK63408.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 355
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 37/222 (16%)
Query: 212 ETGNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSS-PSDAPKLYRLCI 270
+ G+ Q + F GR+ L + F W V+G +W S P D K L
Sbjct: 71 DFGSQQRNIGFWGRVVVLSVLSLLLYP-FLWAWTVIGTIWFTKAKSCLPEDGQKWGFL-- 127
Query: 271 VFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYS---------QTRGATAETINAL 321
++L FS C +C C+ L R+ +S G + I +
Sbjct: 128 IWLMFS---------YCGLLCIACICVGKWLARRQVHSLRAQQGIPSSEFGIVVDMIR-V 177
Query: 322 PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKE--------------RMISGEDAVCCI 367
P + F++ + ++ G+ + E + + + C I
Sbjct: 178 PDWAFEAAGQEMRSMSQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECLI 237
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CL ++ E+R L C+H FHV+C+D+WL++N CP C+S +
Sbjct: 238 CLEEFQIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRSSV 279
>gi|196011289|ref|XP_002115508.1| hypothetical protein TRIADDRAFT_59522 [Trichoplax adhaerens]
gi|190581796|gb|EDV21871.1| hypothetical protein TRIADDRAFT_59522 [Trichoplax adhaerens]
Length = 350
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 31/138 (22%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQ--TRGATAETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC + +++ G+ + R +++LPT KFK ++ + D
Sbjct: 179 YCLPFVMIGVICILMLLGLAISGLHMMVQKHRDRNRLRRRVDSLPTKKFKKGRDDQIYD- 237
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
VC +CL Y D+D+LR L C+H FH C+D W+
Sbjct: 238 --------------------------VCAVCLEDYEDNDKLRLLPCNHAFHARCIDPWIL 271
Query: 397 -KINASCPLCKSEIGDSS 413
+ ++CPLCK I +
Sbjct: 272 GQDKSTCPLCKQPINKKA 289
>gi|350420241|ref|XP_003492446.1| PREDICTED: hypothetical protein LOC100747900 [Bombus impatiens]
Length = 626
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 36/161 (22%)
Query: 251 WIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQT 310
W+ H SDA + + F +G P + L + ++ +R + +
Sbjct: 488 WLQHLHLQGSDAHDM-------MPFPSLGLLHP---ARQMSAQLENYMRLVDLRRMAAIS 537
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV--CCIC 368
GAT E+I + T++ K K+ ++++ + EDA+ C IC
Sbjct: 538 CGATQESIESH-TFRHKYKR-----------------------EKKVENSEDAIEKCTIC 573
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L+++ D + +R L C H+FH+DCVD+WL N CP+C+ +I
Sbjct: 574 LSEFEDCESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 614
>gi|224132906|ref|XP_002321438.1| predicted protein [Populus trichocarpa]
gi|222868434|gb|EEF05565.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 15/95 (15%)
Query: 328 SKKNGNLNDQDNSGGTEGGVLAAGT--------------EKERMISGEDAVCCICLAKYV 373
S ++G L + D++ TE V+ AG E R+ +D C ICL +Y
Sbjct: 280 SSESGGLPEVDSTVDTESVVIIAGLDGPTIESYPKIVLGESRRLPKPDDNTCSICLCEYK 339
Query: 374 DDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
+ L+ + C H FH DC+D+WL++NASCP+C++
Sbjct: 340 PKETLKTIPECKHCFHSDCIDEWLRLNASCPICRN 374
>gi|194221716|ref|XP_001491239.2| PREDICTED: e3 ubiquitin-protein ligase RNF13 [Equus caballus]
Length = 381
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRVLPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|195037839|ref|XP_001990368.1| GH19305 [Drosophila grimshawi]
gi|193894564|gb|EDV93430.1| GH19305 [Drosophila grimshawi]
Length = 885
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YK+ + + +G
Sbjct: 750 LAERLGEAKPRGLTRNEIDQLPSYKYNPEAH---------------------------NG 782
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 783 DQSSCVVCMCDFELRQMLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 833
>gi|308803476|ref|XP_003079051.1| FOG: Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
gi|116057505|emb|CAL51932.1| FOG: Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
Length = 530
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 27/115 (23%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
Q G E + ALP KF VL E E G D C IC
Sbjct: 369 QQTGTPEEVVQALPIVKFDP------------------VLKEVIESE----GHDPTCTIC 406
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCK-SEIGDSSSPLVQDSA 421
L Y + +ELR L C H+FH +C D WL+ + +CP+C+ S IG+S+S QDSA
Sbjct: 407 LDDYTNGEELRRLPSCKHLFHKECADLWLRGSCTCPICRTSVIGESTS---QDSA 458
>gi|328768780|gb|EGF78825.1| hypothetical protein BATDEDRAFT_89994 [Batrachochytrium
dendrobatidis JAM81]
Length = 465
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EDA C ICLA+Y D+L+++ C H FH CVD WL++ ++CPLC E+
Sbjct: 405 EDAHCIICLAEYDSGDDLKQMPCKHHFHAICVDDWLRLKSNCPLCIQEL 453
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 236 ALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLP 295
A+D F + V G + + AP +Y + + S + + PF+LC LP
Sbjct: 186 AIDLPFLILLVAGLIALMSPSRCLETAPLIYYANSILVVLSFMYFCSPFLLCIVAIFFLP 245
Query: 296 CIISVLGIREDYSQ-----TRGATAETINALPTYKFKSK 329
CI + E + +RGA E IN +P KF+ K
Sbjct: 246 CIFLLSRYYETHPPDILDGSRGAPEELINGIPILKFRRK 284
>gi|432879090|ref|XP_004073447.1| PREDICTED: RING finger protein 44-like [Oryzias latipes]
Length = 440
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F S+ +
Sbjct: 351 LAERLGEAKPRGLTKADIEQLPSYRFNSENH---------------------------LS 383
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ D
Sbjct: 384 EQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASD 434
>gi|298705326|emb|CBJ49016.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1372
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 329 KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFH 388
+K G + +GG + +A G E + A C ICL + + D LR+L C H FH
Sbjct: 1149 EKGGGVESAGVTGGDDEAFIAQGAE-----AASSADCAICLGGFEEGDVLRKLPCLHFFH 1203
Query: 389 VDCVDKWLKINASCPLCK 406
CVD+WL ++ SCPLCK
Sbjct: 1204 QKCVDEWLHLSVSCPLCK 1221
>gi|164663850|ref|NP_001106884.1| E3 ubiquitin-protein ligase RNF13 isoform a precursor [Mus
musculus]
gi|341941985|sp|O54965.2|RNF13_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|34849794|gb|AAH58182.1| Rnf13 protein [Mus musculus]
gi|74192298|dbj|BAE34334.1| unnamed protein product [Mus musculus]
gi|148703375|gb|EDL35322.1| ring finger protein 13, isoform CRA_b [Mus musculus]
gi|148703379|gb|EDL35326.1| ring finger protein 13, isoform CRA_b [Mus musculus]
Length = 381
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 570 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 615
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 37/51 (72%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ + SS+
Sbjct: 531 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASSN 581
>gi|226495723|ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea mays]
gi|194702090|gb|ACF85129.1| unknown [Zea mays]
Length = 483
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 17/82 (20%)
Query: 345 GGVLAAGTEKERMISGEDAV-CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASC 402
G V+ AG G+D C +CL ++ DDD LR L CSH FHVDC+D WL +++C
Sbjct: 140 GAVVGAG--------GKDPFDCAVCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTC 191
Query: 403 PLCKSEI-------GDSSSPLV 417
PLC+ + G + SPLV
Sbjct: 192 PLCRRSLLADFPTCGGACSPLV 213
>gi|449464090|ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
gi|449505086|ref|XP_004162372.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 393
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ R+ D C ICL++Y + +R + C H FH +CVD+WLK+NA+CP+C++ D
Sbjct: 305 QSRRLPKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCRTSPDD 364
Query: 412 SSS 414
SS+
Sbjct: 365 SSA 367
>gi|2746335|gb|AAC03770.1| RING zinc finger protein [Mus musculus]
Length = 381
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 566 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 611
>gi|344256183|gb|EGW12287.1| Zinc/RING finger protein 3 [Cricetulus griseus]
Length = 672
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 316 ETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDD 375
+ + + T KF SK G EG A T + SG + C ICL KY+D
Sbjct: 11 QALEKMETRKFNSKSKGR---------REGSCGALDT----LSSGSTSDCAICLEKYIDG 57
Query: 376 DELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ELR + C+H FH CVD WL + +CP C+ I
Sbjct: 58 EELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 91
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 570 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 615
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 584 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 629
>gi|449477933|ref|XP_004155166.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 382
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E R+ C ICL +Y+ D +R + C H FHVDC+D+WL++N+SCPLC++
Sbjct: 314 ESRRLPGPNGTTCSICLGEYLTKDTVRCIPECKHCFHVDCIDQWLRVNSSCPLCRNSPNP 373
Query: 412 SSSPLV 417
S S L+
Sbjct: 374 SPSHLI 379
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 568 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 613
>gi|301628324|ref|XP_002943307.1| PREDICTED: RING finger protein 44-like [Xenopus (Silurana)
tropicalis]
Length = 430
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F ++ +
Sbjct: 341 LAERLGEAKPRGLTKANIEQLPSYRFNAESH---------------------------QS 373
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ ++
Sbjct: 374 EQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKSNRTCPICRADASEA 425
>gi|356574044|ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
Length = 352
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 43/157 (27%)
Query: 270 IVFLTFSCIGYAMPFILCATICCCLPC-----IISVLGIRED-------YSQTRGATAET 317
++F F IGY +IL C P I S+ ED S+ RG
Sbjct: 45 MMFTAFFLIGY---YILVVKCCLNWPHVDHVRIFSLSRSHEDPSAPYSTASEPRGLEEAV 101
Query: 318 INALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDE 377
I +P +FK + E ER S C +CL+++ D++
Sbjct: 102 IKLIPVIQFKPE-----------------------EGERSFSE----CSVCLSEFQQDEK 134
Query: 378 LRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
LR + CSHVFH+DC+D WL+ NA CPLC+ + +S
Sbjct: 135 LRVIPNCSHVFHIDCIDVWLQNNAYCPLCRRTVSLTS 171
>gi|195108127|ref|XP_001998644.1| GI23522 [Drosophila mojavensis]
gi|193915238|gb|EDW14105.1| GI23522 [Drosophila mojavensis]
Length = 1020
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YK+ + SG
Sbjct: 880 LAERLGEAKPRGLTRNEIDQLPSYKYNPDAH---------------------------SG 912
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 913 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 963
>gi|359477789|ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
Length = 359
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 24/102 (23%)
Query: 309 QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
++RG I ++P ++F+ GG E G ER C +C
Sbjct: 105 ESRGLDESVIRSIPIFQFR-----------KGGGREFG--------ER----SHCECAVC 141
Query: 369 LAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
L ++ ++++LR + CSH+FH+DC+D WL+ NA+CPLC++ I
Sbjct: 142 LNEFQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSI 183
>gi|297275258|ref|XP_001090387.2| PREDICTED: hypothetical protein LOC702104 [Macaca mulatta]
Length = 634
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G + G +
Sbjct: 522 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESD 577
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 578 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 626
>gi|157821373|ref|NP_001102914.1| E3 ubiquitin-protein ligase RNF13 precursor [Rattus norvegicus]
gi|81884214|sp|Q66HG0.1|RNF13_RAT RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|51859285|gb|AAH81881.1| Similar to ring finger protein 13 [Rattus norvegicus]
gi|149064725|gb|EDM14876.1| rCG50011, isoform CRA_b [Rattus norvegicus]
gi|149064726|gb|EDM14877.1| rCG50011, isoform CRA_b [Rattus norvegicus]
Length = 380
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 570 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 615
>gi|348528117|ref|XP_003451565.1| PREDICTED: RING finger protein 165-like [Oreochromis niloticus]
Length = 345
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 27/125 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + +RGA TI T+ K KK L L
Sbjct: 235 AVRESYEELLQLEDRLGSVSRGAVQTTIERF-TFPHKYKKRKPLQ------------LKI 281
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
G E+E + D C ICL+ D +++R L C H+FH CVD+WL + CP+C+ +I
Sbjct: 282 GEEEETDV---DEKCTICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIE 338
Query: 411 DSSSP 415
+P
Sbjct: 339 TQLNP 343
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 565 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 610
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 561 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 606
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 540 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 585
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 567 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 612
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614
>gi|169641968|gb|AAI60676.1| Unknown (protein for IMAGE:8330050) [Xenopus laevis]
Length = 508
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 419 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 451
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 452 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 502
>gi|118403784|ref|NP_001072864.1| E3 ubiquitin-protein ligase ZNRF3 precursor [Xenopus (Silurana)
tropicalis]
gi|123884550|sp|Q08D68.1|ZNRF3_XENTR RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
gi|115313443|gb|AAI23918.1| hypothetical protein MGC145215 [Xenopus (Silurana) tropicalis]
Length = 853
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 182 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLIKIKLKQRRSQNSMNRMAV-QAL 232
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFK+K G + + + GG + + S + C ICL KY+D +EL
Sbjct: 233 EKMETRKFKAK--GKVPREGSCGGLD-----------TLSSSSTSDCAICLEKYIDGEEL 279
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL N +CP C+ I
Sbjct: 280 RVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 310
>gi|444725962|gb|ELW66511.1| Kremen protein 1 [Tupaia chinensis]
Length = 1280
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 185 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 235
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 236 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 282
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 283 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 313
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 562 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 607
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 567 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 612
>gi|354499654|ref|XP_003511923.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Cricetulus griseus]
gi|344256164|gb|EGW12268.1| RING finger protein 13 [Cricetulus griseus]
Length = 380
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|120577569|gb|AAI30125.1| LOC100037019 protein [Xenopus laevis]
Length = 496
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 407 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 439
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 440 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 490
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 557 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 602
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 554 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 599
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 565 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 610
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 503 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 548
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 428 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 473
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 556 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 601
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 555 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 600
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 556 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 601
>gi|332228409|ref|XP_003263382.1| PREDICTED: RING finger protein 38 isoform 3 [Nomascus leucogenys]
Length = 674
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 585 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 617
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 618 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 668
>gi|444515701|gb|ELV10953.1| E3 ubiquitin-protein ligase RNF6 [Tupaia chinensis]
Length = 574
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS P
Sbjct: 519 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSSIP 571
>gi|118352226|ref|XP_001009386.1| RING finger protein [Tetrahymena thermophila]
gi|89291153|gb|EAR89141.1| RING finger protein [Tetrahymena thermophila SB210]
Length = 1202
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C ICL + + ++++EL C H FH+ CVD WLKI SCPLC+ +
Sbjct: 1135 KTCAICLNDFDEGEKVKELNCEHRFHISCVDDWLKIKGSCPLCRQNL 1181
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 548 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 593
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 540 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 585
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 552 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 597
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 538 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 583
>gi|332228405|ref|XP_003263380.1| PREDICTED: RING finger protein 38 isoform 1 [Nomascus leucogenys]
Length = 724
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 635 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 667
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 668 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 718
>gi|224089028|ref|XP_002308607.1| predicted protein [Populus trichocarpa]
gi|222854583|gb|EEE92130.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 28/109 (25%)
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGE 361
G+ S+ G E IN++P ++F S K G EG
Sbjct: 79 GLIRSSSRFSGIGEEVINSMPFFRFSSLK----------GSKEG---------------- 112
Query: 362 DAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C++K+ D D LR L C H FH +C+D+WLK ++SCPLC+ +I
Sbjct: 113 -LECAVCISKFEDSDVLRLLPKCKHAFHENCIDQWLKSHSSCPLCRYKI 160
>gi|226503579|ref|NP_001141538.1| uncharacterized protein LOC100273652 [Zea mays]
gi|194704976|gb|ACF86572.1| unknown [Zea mays]
gi|414587073|tpg|DAA37644.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 289
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 322 PTYKFKSKKNGNLN-DQDNSGGTEGGVLAA-----GTEKERMISGEDAVCCICLAKYVDD 375
PT + +++G L +D +GG + VL A K+ +GE C +CLA+ D
Sbjct: 69 PTSAQQHQQHGTLGRGRDATGGLDPSVLRALPVTVYEAKDDHRAGEALECAVCLAELADG 128
Query: 376 DELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIG 410
+ R L C+H FH +C+D+WL+ +++CPLC+ ++G
Sbjct: 129 EPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDVG 164
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 557 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 602
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 545 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 590
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 545 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 590
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 545 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 590
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614
>gi|66811790|ref|XP_640074.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
gi|60468089|gb|EAL66099.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
Length = 320
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
+L + D GA E I+ LPT+ + K + E +
Sbjct: 229 LLALDNDIQNHGGAKKEQIDLLPTHFIDTDK----------------------DLEIFLK 266
Query: 360 GEDA-VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
G D+ C ICL + +D ++ L C H +H DCV+KWLKI + CP+CK+ + +S
Sbjct: 267 GGDSKTCSICLDDFAVNDAIKTLPCIHHYHSDCVEKWLKIKSVCPICKTSVFES 320
>gi|334325346|ref|XP_001371377.2| PREDICTED: RING finger protein 165-like [Monodelphis domestica]
Length = 492
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + +RGA TI T+ K KK Q+ G E G +
Sbjct: 380 AVRESYEELLQLEDRLGNVSRGAVQNTIERF-TFPHKYKKR---RPQEGKGKKEDGEESD 435
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 436 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 484
>gi|303288165|ref|XP_003063371.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455203|gb|EEH52507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 228
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 23/113 (20%)
Query: 298 ISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM 357
++ G+ + G E I+A+P++K+ + ++ SGG E
Sbjct: 4 LARAGLLGGHVAPAGCPREVIDAIPSFKYSPETFADV-----SGGKE------------- 45
Query: 358 ISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
DA+C +C+ + + DE+R L +C H FH +C+D+WL N +CP C++ +
Sbjct: 46 ----DAICSVCIDPFEEGDEVRALPMCEHAFHKECIDEWLSQNTTCPNCRASL 94
>gi|224146122|ref|XP_002325888.1| predicted protein [Populus trichocarpa]
gi|222862763|gb|EEF00270.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 332 GNLNDQDNSGGTEGGVLAAGT-----EKERMISGEDAVCCICLAKYVDDDELREL-ICSH 385
GN Q GG + VL + T + + + G D C +CL ++ +++ LR L CSH
Sbjct: 102 GNEASQGIPGGLDEAVLKSITICKYKKGDGFVEGTD--CSVCLGEFQENESLRRLPKCSH 159
Query: 386 VFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
FH+ C+D WLK +ASCPLC++ I D ++ L
Sbjct: 160 AFHLLCIDTWLKSHASCPLCRANIADPANVL 190
>gi|297792677|ref|XP_002864223.1| hypothetical protein ARALYDRAFT_918381 [Arabidopsis lyrata subsp.
lyrata]
gi|297310058|gb|EFH40482.1| hypothetical protein ARALYDRAFT_918381 [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 321 LPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGT-----EKERMISGEDAVCCICLAKYVDD 375
+PT + + + L+ N G +G + + E +R+ +DA C ICL++Y
Sbjct: 61 VPTPEINNAQAHYLHSSVNVMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEAK 120
Query: 376 DELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
+ LR + C H FH DC+D+WLK+N +CP+C++
Sbjct: 121 ETLRTIPPCQHCFHADCIDEWLKLNGTCPVCRN 153
>gi|255544994|ref|XP_002513558.1| ring finger protein, putative [Ricinus communis]
gi|223547466|gb|EEF48961.1| ring finger protein, putative [Ricinus communis]
Length = 377
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E R+ +D C ICL++Y + L+ + C H FH DC+D+WLK+NASCP+C+
Sbjct: 309 ESRRLPKPDDITCSICLSEYKPKETLKTIPECQHCFHADCIDEWLKLNASCPICRKSPDR 368
Query: 412 SSSPLVQDS 420
P Q S
Sbjct: 369 LPPPPAQPS 377
>gi|148703376|gb|EDL35323.1| ring finger protein 13, isoform CRA_c [Mus musculus]
Length = 354
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 156 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 206
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 207 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 245
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 246 KTKKTCPVCKQKV 258
>gi|345326230|ref|XP_001507758.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Ornithorhynchus
anatinus]
Length = 462
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 262 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 312
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E +C ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 313 ---------------------GDEYDICAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 351
Query: 397 KINASCPLCKSEI----GDSSSPLVQDSAQ 422
K +CP+CK ++ GDS S DS+Q
Sbjct: 352 KTKKTCPVCKQKVVPSQGDSDSE--TDSSQ 379
>gi|195638030|gb|ACG38483.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 289
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 322 PTYKFKSKKNGNLN-DQDNSGGTEGGVLAA-----GTEKERMISGEDAVCCICLAKYVDD 375
PT + +++G L +D +GG + VL A K+ +GE C +CLA+ D
Sbjct: 69 PTSAQQHQQHGTLGRGRDATGGLDPSVLRALPVTVYEAKDDHRAGEALECAVCLAELADG 128
Query: 376 DELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIG 410
+ R L C+H FH +C+D+WL+ +++CPLC+ ++G
Sbjct: 129 EPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDVG 164
>gi|390179083|ref|XP_003736797.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859705|gb|EIM52870.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1224
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YK+ + + +G
Sbjct: 1092 LAERLGEAKPRGLTRNEIDQLPSYKYNPE---------------------------VHNG 1124
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 1125 DQTSCVVCMCDFELKQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 1175
>gi|426218145|ref|XP_004003310.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Ovis aries]
Length = 380
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|307203731|gb|EFN82691.1| RING finger protein 165 [Harpegnathos saltator]
Length = 695
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 355 ERMISGEDAV--CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+++ +G+DA C ICL+++ D + +R L C H+FH+DCVD+WL N CP+C+ +I
Sbjct: 627 KKVENGDDATEKCTICLSEFEDCENVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDI 683
>gi|115497538|ref|NP_001069610.1| E3 ubiquitin-protein ligase RNF13 precursor [Bos taurus]
gi|122143536|sp|Q0VD51.1|RNF13_BOVIN RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|111308417|gb|AAI19834.1| Ring finger protein 13 [Bos taurus]
gi|296491071|tpg|DAA33154.1| TPA: ring finger protein 13 [Bos taurus]
gi|440896858|gb|ELR48673.1| E3 ubiquitin-protein ligase RNF13 [Bos grunniens mutus]
Length = 380
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 587 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 632
>gi|392345650|ref|XP_003749329.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Rattus
norvegicus]
Length = 278
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 81 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 131
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 132 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 170
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 171 KTKKTCPVCKQKV 183
>gi|332228407|ref|XP_003263381.1| PREDICTED: RING finger protein 38 isoform 2 [Nomascus leucogenys]
Length = 511
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 422 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 454
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 455 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 505
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 428 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 473
>gi|355716933|gb|AES05771.1| ring finger protein 38 [Mustela putorius furo]
Length = 460
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 372 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 404
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 405 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 455
>gi|355567624|gb|EHH23965.1| RING finger protein 38, partial [Macaca mulatta]
gi|355753195|gb|EHH57241.1| RING finger protein 38, partial [Macaca fascicularis]
Length = 512
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 423 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 455
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 456 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 506
>gi|350579371|ref|XP_003480597.1| PREDICTED: RING finger protein 38 isoform 2 [Sus scrofa]
Length = 466
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 377 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 409
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 410 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 460
>gi|355716766|gb|AES05716.1| ring finger protein 13 [Mustela putorius furo]
Length = 380
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|357478447|ref|XP_003609509.1| RING finger protein [Medicago truncatula]
gi|355510564|gb|AES91706.1| RING finger protein [Medicago truncatula]
Length = 545
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 360 GEDA-VCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSPLV 417
G DA C ICLA+Y D D++R L C H +H+ CVDKWLK I+ CPLC+S + + L
Sbjct: 478 GNDAEQCYICLAEYEDGDQIRVLPCKHEYHMSCVDKWLKEIHGVCPLCRSNVCGGLTELS 537
Query: 418 QDS 420
DS
Sbjct: 538 TDS 540
>gi|417411347|gb|JAA52113.1| Putative ring finger protein 38, partial [Desmodus rotundus]
Length = 518
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 429 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 461
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 462 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 512
>gi|395850185|ref|XP_003797677.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Otolemur
garnettii]
gi|395850187|ref|XP_003797678.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Otolemur
garnettii]
Length = 681
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C+H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 626 KICSVCISDYVTGNKLRQLPCTHEFHIHCIDRWLSENCTCPVCRQPVLGSS 676
>gi|357117891|ref|XP_003560695.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 315
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV-CCICLA 370
G + + I ALPT+ ++S+ + Q S AG+ + + G +AV C +CL
Sbjct: 81 GLSMDDITALPTFTYRSRA-APMTPQSLSR-------CAGSSRSK---GREAVECVVCLQ 129
Query: 371 KYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCK--------SEIGDSSSPLVQ 418
+ VD D +R L C H FH C+D WL+ +SCP+C+ + +G+ S PL Q
Sbjct: 130 ELVDGDVVRVLPACKHFFHGGCIDVWLRTRSSCPVCRAYPEPEAGARLGELSPPLPQ 186
>gi|410971206|ref|XP_003992063.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Felis catus]
Length = 381
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|393243075|gb|EJD50591.1| hypothetical protein AURDEDRAFT_112196 [Auricularia delicata
TFB-10046 SS5]
Length = 976
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSE 408
C +CL Y DDDELR L C HVFH CVDKWL+ +CP C+++
Sbjct: 906 CLVCLDDYADDDELRLLSCRHVFHKTCVDKWLETGKNNCPACRAK 950
>gi|301776154|ref|XP_002923497.1| PREDICTED: RING finger protein 13-like [Ailuropoda melanoleuca]
gi|281353739|gb|EFB29323.1| hypothetical protein PANDA_012636 [Ailuropoda melanoleuca]
Length = 381
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|417410939|gb|JAA51933.1| Putative ring finger protein 38, partial [Desmodus rotundus]
Length = 467
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 378 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 410
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 411 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 461
>gi|57103676|ref|XP_534303.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Canis lupus
familiaris]
Length = 381
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|328868880|gb|EGG17258.1| phosphatidylinositol transfer protein [Dictyostelium fasciculatum]
Length = 587
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
+L + +D A E I +LP + KS ND ++ L + T+ S
Sbjct: 493 LLALDQDNLNYGAAKKEEIESLPMHTIKSD-----NDIEH--------LFSDTQSS---S 536
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ C ICL ++ D+ L+ L C H FH +C+DKWLKI A+CP+CKS +
Sbjct: 537 QQPTSCSICLDEFEIDNHLKTLPCLHHFHSECIDKWLKIKANCPICKSSL 586
>gi|296227840|ref|XP_002759543.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Callithrix jacchus]
Length = 381
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|449467309|ref|XP_004151366.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
Length = 422
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 260 SDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCI------ISVLG---IREDYSQT 310
S P+ + + I L+ I ++M FIL C P + LG +R D S+
Sbjct: 31 SGIPQNFTIVIGILS---IMFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSD-SRF 86
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
G + I+ALP ++F S K G EG C +CL+
Sbjct: 87 SGVDQKVIDALPFFRFSSLK----------GSREG-----------------LECAVCLS 119
Query: 371 KYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
K+ D + LR L C H FH+ C+D WL+ ++SCP+C+ IG
Sbjct: 120 KFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRIG 160
>gi|6005864|ref|NP_009213.1| E3 ubiquitin-protein ligase RNF13 [Homo sapiens]
gi|34577087|ref|NP_899237.1| E3 ubiquitin-protein ligase RNF13 [Homo sapiens]
gi|197101023|ref|NP_001125196.1| E3 ubiquitin-protein ligase RNF13 precursor [Pongo abelii]
gi|114589798|ref|XP_530652.2| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 10 [Pan
troglodytes]
gi|114589802|ref|XP_001142115.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 9 [Pan
troglodytes]
gi|332214389|ref|XP_003256319.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Nomascus
leucogenys]
gi|332214391|ref|XP_003256320.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Nomascus
leucogenys]
gi|397512369|ref|XP_003826520.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Pan paniscus]
gi|426342508|ref|XP_004037884.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Gorilla
gorilla gorilla]
gi|426342510|ref|XP_004037885.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Gorilla
gorilla gorilla]
gi|21362880|sp|O43567.1|RNF13_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|75042231|sp|Q5RCV8.1|RNF13_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|2746333|gb|AAC03769.1| RING zinc finger protein [Homo sapiens]
gi|3387925|gb|AAC28641.1| RING zinc finger protein RZF [Homo sapiens]
gi|14602541|gb|AAH09781.1| Ring finger protein 13 [Homo sapiens]
gi|14602579|gb|AAH09803.1| Ring finger protein 13 [Homo sapiens]
gi|48145725|emb|CAG33085.1| RNF13 [Homo sapiens]
gi|55727286|emb|CAH90399.1| hypothetical protein [Pongo abelii]
gi|119599265|gb|EAW78859.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|119599267|gb|EAW78861.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|119599269|gb|EAW78863.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|167773739|gb|ABZ92304.1| ring finger protein 13 [synthetic construct]
gi|189053849|dbj|BAG36109.1| unnamed protein product [Homo sapiens]
gi|193786879|dbj|BAG52202.1| unnamed protein product [Homo sapiens]
gi|306921283|dbj|BAJ17721.1| ring finger protein 13 [synthetic construct]
gi|325463911|gb|ADZ15726.1| ring finger protein 13 [synthetic construct]
gi|410210576|gb|JAA02507.1| ring finger protein 13 [Pan troglodytes]
gi|410254348|gb|JAA15141.1| ring finger protein 13 [Pan troglodytes]
gi|410308004|gb|JAA32602.1| ring finger protein 13 [Pan troglodytes]
gi|410351773|gb|JAA42490.1| ring finger protein 13 [Pan troglodytes]
gi|410351775|gb|JAA42491.1| ring finger protein 13 [Pan troglodytes]
Length = 381
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|242079335|ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [Sorghum bicolor]
gi|241940786|gb|EES13931.1| hypothetical protein SORBIDRAFT_07g021910 [Sorghum bicolor]
Length = 500
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 17/82 (20%)
Query: 345 GGVLAAGTEKERMISGEDAV-CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASC 402
G V+ AG G+D C +CL ++ DDD LR L CSH FHVDC+D WL +++C
Sbjct: 141 GAVVGAG--------GKDPFDCAVCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTC 192
Query: 403 PLCK-------SEIGDSSSPLV 417
PLC+ S G SPLV
Sbjct: 193 PLCRRSLLADFSPCGGGCSPLV 214
>gi|195112014|ref|XP_002000571.1| GI22448 [Drosophila mojavensis]
gi|193917165|gb|EDW16032.1| GI22448 [Drosophila mojavensis]
Length = 1503
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT E I N LP +K++ + + +D+D EK C IC
Sbjct: 1397 RGATLEIIERNTLP-HKYRRVRRPSESDED-------------AEK----------CAIC 1432
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L+ + ++++R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1433 LSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1473
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +H+ C+D+WL N++CP+C+ +
Sbjct: 567 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 612
>gi|50949355|emb|CAB66751.3| hypothetical protein [Homo sapiens]
Length = 515
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 426 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 458
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 459 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 509
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +H+ C+D+WL N++CP+C+ +
Sbjct: 561 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 606
>gi|395521044|ref|XP_003764631.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Sarcophilus
harrisii]
Length = 242
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 338 DNSGGTEGGVLAAGTEK------ERMISGE-DAVCCICLAKYVDDDELRELICSHVFHVD 390
D+S GG+ +K E I+GE + C IC+ Y ++LR+L C+H FHV
Sbjct: 158 DDSWYCSGGLTNEEIDKFSTKSYESSINGETNKACSICVNTYTQGNKLRQLPCTHEFHVH 217
Query: 391 CVDKWLKINASCPLCKSEIGDSSS 414
C+D+WL N +CP+C+ + D+++
Sbjct: 218 CIDRWLAENNTCPICRQPVLDTNT 241
>gi|356545341|ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
Length = 393
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
C +CL ++ D+D +R L +CSH FHVDC+D WL+ +A+CPLC++ + + SP
Sbjct: 134 CAVCLLEFEDEDYVRTLPVCSHTFHVDCIDAWLRSHANCPLCRAGVLCTDSPFT 187
>gi|359807355|ref|NP_001241380.1| uncharacterized protein LOC100777936 [Glycine max]
gi|255645784|gb|ACU23384.1| unknown [Glycine max]
Length = 274
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 305 EDYSQTRGATAETINALPTYKFK--SKKNGNLNDQDNSGGT-----EGGVLAAGTEKERM 357
++ S T E INALP +K+K + G + Q S T + A G+ K
Sbjct: 149 DNVSTAPSMTEEEINALPVHKYKVSGPQCGGSSMQQASSSTPAEKKQDNSNAVGSMKA-- 206
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
S +D C +CL + D LR L C H FH +C+D WL+ +CP+CK G
Sbjct: 207 -SDDDLTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAG 258
>gi|402896963|ref|XP_003911547.1| PREDICTED: RING finger protein 38 isoform 1 [Papio anubis]
Length = 586
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 497 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 529
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 530 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 580
>gi|358420980|ref|XP_003584785.1| PREDICTED: LOW QUALITY PROTEIN: zinc/RING finger protein 3 [Bos
taurus]
Length = 756
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 95 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 145
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 146 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 192
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 193 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 223
>gi|297733816|emb|CBI15063.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 365 CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C +CL+++ ++D+LR L+ CSH FH++C+D WL N++CPLC+ + S PL
Sbjct: 604 CAVCLSEFSENDQLRLLVMCSHAFHINCIDTWLLSNSTCPLCRGTLLSSGLPL 656
>gi|242044574|ref|XP_002460158.1| hypothetical protein SORBIDRAFT_02g023600 [Sorghum bicolor]
gi|241923535|gb|EER96679.1| hypothetical protein SORBIDRAFT_02g023600 [Sorghum bicolor]
Length = 408
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 317 TINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDD 376
I+ALP + + G AA + K + + C +CL ++ D D
Sbjct: 146 AIDALPEFAYAE--------------LSGTAAAAASRKGKEKAARPFDCAVCLCEFADHD 191
Query: 377 ELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
LR L +C H FHV C+D WL+ +A+CPLC++++
Sbjct: 192 RLRLLPLCGHAFHVACIDVWLRSSATCPLCRTKV 225
>gi|402861239|ref|XP_003895008.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Papio
anubis]
gi|402861241|ref|XP_003895009.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Papio
anubis]
gi|380783017|gb|AFE63384.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
gi|383410459|gb|AFH28443.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
gi|384941704|gb|AFI34457.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
Length = 381
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +H+ C+D+WL N++CP+C+ +
Sbjct: 696 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 741
>gi|126334064|ref|XP_001371090.1| PREDICTED: RING finger protein 38 [Monodelphis domestica]
Length = 520
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 431 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 463
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 464 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 514
>gi|37577175|ref|NP_073618.3| RING finger protein 38 isoform 1 [Homo sapiens]
gi|297270600|ref|XP_002800138.1| PREDICTED: RING finger protein 38 isoform 3 [Macaca mulatta]
gi|297684041|ref|XP_002819666.1| PREDICTED: RING finger protein 38 isoform 1 [Pongo abelii]
gi|397519528|ref|XP_003829910.1| PREDICTED: RING finger protein 38 isoform 1 [Pan paniscus]
gi|426361761|ref|XP_004048068.1| PREDICTED: RING finger protein 38 isoform 1 [Gorilla gorilla
gorilla]
gi|56749664|sp|Q9H0F5.4|RNF38_HUMAN RecName: Full=RING finger protein 38
Length = 515
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 426 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 458
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 459 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 509
>gi|359491256|ref|XP_003634250.1| PREDICTED: receptor-like protein kinase HSL1 [Vitis vinifera]
Length = 976
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 365 CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C +CL+++ ++D+LR L+ CSH FH++C+D WL N++CPLC+ + S PL
Sbjct: 754 CAVCLSEFSENDQLRLLVMCSHAFHINCIDTWLLSNSTCPLCRGTLLSSGLPL 806
>gi|332831910|ref|XP_003312132.1| PREDICTED: RING finger protein 38 isoform 5 [Pan troglodytes]
Length = 465
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 408
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 459
>gi|294461394|gb|ADE76258.1| unknown [Picea sitchensis]
Length = 541
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
EK ++ E A C ICLA+Y + D++R L C H +H+ CVDKWLK I+ CPLC+ +
Sbjct: 471 EKNENVNDEAAQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHRVCPLCRGNV 528
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 563 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 608
>gi|390458125|ref|XP_003732059.1| PREDICTED: RING finger protein 38 isoform 2 [Callithrix jacchus]
gi|403306614|ref|XP_003943820.1| PREDICTED: RING finger protein 38 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 465
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 408
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 459
>gi|410042605|ref|XP_003951472.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
Length = 515
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 426 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 458
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 459 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 509
>gi|224075100|ref|XP_002304557.1| predicted protein [Populus trichocarpa]
gi|222841989|gb|EEE79536.1| predicted protein [Populus trichocarpa]
Length = 385
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 356 RMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
R+ D C ICL++Y D LR + CSH FH +C+D+WLK+NA+CPLC++ SS
Sbjct: 307 RLPKPNDNTCPICLSEYQPKDTLRTIPDCSHYFHANCIDEWLKMNATCPLCRNSPDGSS 365
>gi|390458123|ref|XP_002743126.2| PREDICTED: RING finger protein 38 isoform 1 [Callithrix jacchus]
gi|403306612|ref|XP_003943819.1| PREDICTED: RING finger protein 38 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 515
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 426 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 458
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 459 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 509
>gi|332831908|ref|XP_003312131.1| PREDICTED: RING finger protein 38 isoform 4 [Pan troglodytes]
Length = 465
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 408
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 459
>gi|357444873|ref|XP_003592714.1| RING finger protein [Medicago truncatula]
gi|355481762|gb|AES62965.1| RING finger protein [Medicago truncatula]
Length = 339
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 26/109 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K AG+++ G + C I
Sbjct: 257 TESRGLSTDTIACLPSVNYK----------------------AGSDQ----LGSNDSCVI 290
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ S S L
Sbjct: 291 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL 339
>gi|255564721|ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
gi|223537443|gb|EEF39071.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
Length = 374
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 272 FLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKN 331
L C+ A+P I+ A + +I + R + + + ++ LP
Sbjct: 234 ILRVICLSVAVPSIILAGGIVAVALLIDRVPRRNRRTTNQNSATVAVSPLPNIAMVGL-- 291
Query: 332 GNLNDQDNSGGTEGGVLAAGTEKERMISGE-DAVCCICLAKYVDDDELRELI-CSHVFHV 389
D+ E VL E R+ +G D+ C ICLA+Y + LR + C H FHV
Sbjct: 292 ----DESTIESYEKVVLG---ESMRLPAGRNDSTCAICLAEYRSKETLRCIPECKHCFHV 344
Query: 390 DCVDKWLKINASCPLCKSEIGDSSSPLVQDSAQH 423
+C+D+WLK+N+SCP+C+ +S SPL D +Q+
Sbjct: 345 ECIDEWLKMNSSCPVCR----NSPSPL-HDRSQN 373
>gi|195395880|ref|XP_002056562.1| GJ11010 [Drosophila virilis]
gi|194143271|gb|EDW59674.1| GJ11010 [Drosophila virilis]
Length = 1477
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT E I N LP +K++ + + D+D EK C IC
Sbjct: 1370 RGATLEIIERNTLP-HKYRRVRRPSETDED-------------AEK----------CAIC 1405
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L+ + ++++R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1406 LSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1446
>gi|363744649|ref|XP_424864.3| PREDICTED: RING finger protein 38 [Gallus gallus]
Length = 468
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 381 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 413
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 414 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 464
>gi|115495409|ref|NP_001070092.1| RING finger protein 44 [Danio rerio]
gi|123908298|sp|Q08CG8.1|RNF44_DANRE RecName: Full=RING finger protein 44
gi|115313066|gb|AAI24247.1| Zgc:153103 [Danio rerio]
Length = 448
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F NL + +
Sbjct: 359 LAERLGEAKPRGLTKADIEQLPSYRF------NLENHQS--------------------- 391
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 392 EQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASE 442
>gi|37577179|ref|NP_919310.1| RING finger protein 38 isoform 3 [Homo sapiens]
gi|297270602|ref|XP_002800139.1| PREDICTED: RING finger protein 38 isoform 4 [Macaca mulatta]
gi|297684043|ref|XP_002819667.1| PREDICTED: RING finger protein 38 isoform 2 [Pongo abelii]
gi|397519532|ref|XP_003829912.1| PREDICTED: RING finger protein 38 isoform 3 [Pan paniscus]
gi|426361763|ref|XP_004048069.1| PREDICTED: RING finger protein 38 isoform 2 [Gorilla gorilla
gorilla]
gi|54673576|gb|AAH33786.2| Ring finger protein 38 [Homo sapiens]
gi|117646890|emb|CAL37560.1| hypothetical protein [synthetic construct]
Length = 465
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 408
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 459
>gi|332248066|ref|XP_003273182.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Nomascus
leucogenys]
gi|332248068|ref|XP_003273183.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Nomascus
leucogenys]
gi|332248070|ref|XP_003273184.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Nomascus
leucogenys]
gi|332248072|ref|XP_003273185.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Nomascus
leucogenys]
gi|332248074|ref|XP_003273186.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Nomascus
leucogenys]
Length = 685
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
+D Q RG T E I+ L T + + NS +E G +
Sbjct: 598 DDDDQIRGLTKEQIDNLSTRHY----------EHNSIDSELG----------------KI 631
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|217075118|gb|ACJ85919.1| unknown [Medicago truncatula]
gi|388515517|gb|AFK45820.1| unknown [Medicago truncatula]
Length = 339
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 26/109 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K AG+++ G + C I
Sbjct: 257 TESRGLSTDTIACLPSVNYK----------------------AGSDQ----LGSNDSCVI 290
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ S S L
Sbjct: 291 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL 339
>gi|149064727|gb|EDM14878.1| rCG50011, isoform CRA_c [Rattus norvegicus]
Length = 353
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 156 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK--------- 206
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 207 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 245
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 246 KTKKTCPVCKQKV 258
>gi|357444871|ref|XP_003592713.1| RING finger protein [Medicago truncatula]
gi|355481761|gb|AES62964.1| RING finger protein [Medicago truncatula]
Length = 333
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 26/109 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K AG+++ G + C I
Sbjct: 251 TESRGLSTDTIACLPSVNYK----------------------AGSDQ----LGSNDSCVI 284
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ S S L
Sbjct: 285 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL 333
>gi|195395466|ref|XP_002056357.1| GJ10273 [Drosophila virilis]
gi|194143066|gb|EDW59469.1| GJ10273 [Drosophila virilis]
Length = 1174
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T ++ LP+YK+ + + +G
Sbjct: 1035 LAERLGEAKPRGLTRNEVDQLPSYKYNPEAH---------------------------NG 1067
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 1068 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 1118
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +H+ C+D+WL N++CP+C+ +
Sbjct: 770 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 815
>gi|449280626|gb|EMC87872.1| RING finger protein 38, partial [Columba livia]
Length = 461
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 372 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 404
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 405 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 455
>gi|402896967|ref|XP_003911549.1| PREDICTED: RING finger protein 38 isoform 3 [Papio anubis]
Length = 502
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 413 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 445
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 446 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 496
>gi|89272082|emb|CAJ81331.1| ring finger protein 38 [Xenopus (Silurana) tropicalis]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|47215711|emb|CAG04795.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 508 LAERLGEAKLRGLTKGDIEQLPSYRF------NPNNHQS--------------------- 540
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C++ + LR L CSH FH CVDKWL+ N +CP+C+++ +
Sbjct: 541 EQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRADASE 591
>gi|355746972|gb|EHH51586.1| hypothetical protein EGM_10995 [Macaca fascicularis]
Length = 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|350591630|ref|XP_003358656.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Sus scrofa]
gi|417515473|gb|JAA53565.1| ring finger protein 13 [Sus scrofa]
Length = 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|73971363|ref|XP_866889.1| PREDICTED: RING finger protein 38 isoform 5 [Canis lupus
familiaris]
gi|410978605|ref|XP_003995680.1| PREDICTED: RING finger protein 38 isoform 1 [Felis catus]
gi|410978607|ref|XP_003995681.1| PREDICTED: RING finger protein 38 isoform 2 [Felis catus]
gi|410978609|ref|XP_003995682.1| PREDICTED: RING finger protein 38 isoform 3 [Felis catus]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|405967974|gb|EKC33083.1| Protein regulator of cytokinesis 1 [Crassostrea gigas]
Length = 1813
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ +G T I LP Y+F K + +D D +
Sbjct: 1722 LAERLGEAKPKGLTKPEIEQLPAYRFN--KENHHSDMDQTS------------------- 1760
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
C +C+ + + LR L CSH FH CVDKWLK N +CP+C+++ + +S
Sbjct: 1761 ----CVVCMCDFENRQLLRVLPCSHEFHAKCVDKWLKTNRTCPICRADATEIAS 1810
>gi|149739190|ref|XP_001504372.1| PREDICTED: RING finger protein 38 isoform 2 [Equus caballus]
Length = 467
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 378 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 410
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 411 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 461
>gi|350579369|ref|XP_003480596.1| PREDICTED: RING finger protein 38 isoform 1 [Sus scrofa]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|268569244|ref|XP_002640470.1| Hypothetical protein CBG13603 [Caenorhabditis briggsae]
Length = 502
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
ED C +CL + + +R+L C+H+FH +C+ KWL IN CP+C+ EI P
Sbjct: 433 EDDTCTVCLNNFEAGESIRKLPCNHLFHPECIYKWLDINKKCPMCREEIDRKPVP 487
>gi|351711776|gb|EHB14695.1| RING finger protein 38 [Heterocephalus glaber]
Length = 428
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 339 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 371
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 372 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 422
>gi|219362621|ref|NP_001137082.1| uncharacterized protein LOC100217255 precursor [Zea mays]
gi|194698274|gb|ACF83221.1| unknown [Zea mays]
gi|414865234|tpg|DAA43791.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 362
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 14/74 (18%)
Query: 350 AGTEKERMISGEDAV-------------CCICLAKYVDDDELREL-ICSHVFHVDCVDKW 395
AG +KE ++S AV C +CLA + D DELR L C HVFH DC+D W
Sbjct: 119 AGLDKEAVVSFPTAVYGDVKARVAGPLECAVCLAAFEDRDELRVLPACCHVFHPDCIDPW 178
Query: 396 LKINASCPLCKSEI 409
L A+CPLC++++
Sbjct: 179 LAGAATCPLCRADL 192
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +H+ C+D+WL N++CP+C+ +
Sbjct: 702 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 747
>gi|395823842|ref|XP_003785186.1| PREDICTED: RING finger protein 38 isoform 1 [Otolemur garnettii]
gi|395823844|ref|XP_003785187.1| PREDICTED: RING finger protein 38 isoform 2 [Otolemur garnettii]
gi|395823846|ref|XP_003785188.1| PREDICTED: RING finger protein 38 isoform 3 [Otolemur garnettii]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|332831902|ref|XP_003312128.1| PREDICTED: RING finger protein 38 isoform 1 [Pan troglodytes]
gi|332831904|ref|XP_528602.3| PREDICTED: RING finger protein 38 isoform 6 [Pan troglodytes]
gi|332831906|ref|XP_003312130.1| PREDICTED: RING finger protein 38 isoform 3 [Pan troglodytes]
gi|410042607|ref|XP_003951473.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|410042610|ref|XP_003951474.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|410042612|ref|XP_003951475.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|343961087|dbj|BAK62133.1| hypothetical protein [Pan troglodytes]
gi|343961287|dbj|BAK62233.1| hypothetical protein [Pan troglodytes]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|71896429|ref|NP_001025505.1| ring finger protein 38 [Xenopus (Silurana) tropicalis]
Length = 464
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 375 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 407
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 408 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 458
>gi|344288944|ref|XP_003416206.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Loxodonta
africana]
Length = 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|297796023|ref|XP_002865896.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297311731|gb|EFH42155.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICL 369
++G + E I+ L T+K+ GT+ + +K++ + +D+ C ICL
Sbjct: 195 SKGLSQERISRLSTHKY---------------GTKTKTWSCWLKKKKFV-ADDSQCSICL 238
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
Y + D++ L C H++H DC+ +WLK N C +CK+E+
Sbjct: 239 VDYAEGDKITTLPCKHIYHKDCISQWLKQNKVCCVCKAEV 278
>gi|291382971|ref|XP_002707959.1| PREDICTED: ring finger protein 38 [Oryctolagus cuniculus]
Length = 560
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 471 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 503
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 504 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 554
>gi|47211404|emb|CAF94220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 428
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F ++ +
Sbjct: 339 LAERLGEAKPRGLTKADIEQLPSYRFNTENH---------------------------LS 371
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ D
Sbjct: 372 EQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASD 422
>gi|348569938|ref|XP_003470754.1| PREDICTED: RING finger protein 38-like [Cavia porcellus]
Length = 513
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 424 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 456
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 457 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 507
>gi|403306616|ref|XP_003943821.1| PREDICTED: RING finger protein 38 isoform 3 [Saimiri boliviensis
boliviensis]
gi|403306618|ref|XP_003943822.1| PREDICTED: RING finger protein 38 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403306620|ref|XP_003943823.1| PREDICTED: RING finger protein 38 isoform 5 [Saimiri boliviensis
boliviensis]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|198454408|ref|XP_002137865.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132780|gb|EDY68423.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 890
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YK+ + + +G
Sbjct: 758 LAERLGEAKPRGLTRNEIDQLPSYKYNPE---------------------------VHNG 790
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 791 DQTSCVVCMCDFELKQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 841
>gi|403265778|ref|XP_003925091.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|327277233|ref|XP_003223370.1| PREDICTED: RING finger protein 38-like [Anolis carolinensis]
Length = 486
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 397 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 429
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 430 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 480
>gi|291399975|ref|XP_002716309.1| PREDICTED: ring finger protein 13 [Oryctolagus cuniculus]
Length = 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 577 TCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 622
>gi|413919160|gb|AFW59092.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 372
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 349 AAGTEKERMI---------------SGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCV 392
AAG EK+R+I G C +CL+ + D ELR L C H FH CV
Sbjct: 112 AAGDEKQRLIDSLPLFTMASALASLPGSSPDCAVCLSPFAPDAELRLLPACRHAFHAACV 171
Query: 393 DKWLKINASCPLCKSEIGDSSSPLVQD 419
D WL+ SCPLC+S + P D
Sbjct: 172 DAWLRTAPSCPLCRSAVALPPHPSRSD 198
>gi|37577177|ref|NP_919309.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|37577181|ref|NP_919311.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|37577185|ref|NP_919313.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|297270598|ref|XP_002800137.1| PREDICTED: RING finger protein 38 isoform 2 [Macaca mulatta]
gi|297270604|ref|XP_002800140.1| PREDICTED: RING finger protein 38 isoform 5 [Macaca mulatta]
gi|297270606|ref|XP_002800141.1| PREDICTED: RING finger protein 38 isoform 6 [Macaca mulatta]
gi|297270608|ref|XP_001082059.2| PREDICTED: RING finger protein 38 isoform 1 [Macaca mulatta]
gi|297270610|ref|XP_002800142.1| PREDICTED: RING finger protein 38 isoform 7 [Macaca mulatta]
gi|297684045|ref|XP_002819668.1| PREDICTED: RING finger protein 38 isoform 3 [Pongo abelii]
gi|297684047|ref|XP_002819669.1| PREDICTED: RING finger protein 38 isoform 4 [Pongo abelii]
gi|332228411|ref|XP_003263383.1| PREDICTED: RING finger protein 38 isoform 4 [Nomascus leucogenys]
gi|397519530|ref|XP_003829911.1| PREDICTED: RING finger protein 38 isoform 2 [Pan paniscus]
gi|402896965|ref|XP_003911548.1| PREDICTED: RING finger protein 38 isoform 2 [Papio anubis]
gi|402896969|ref|XP_003911550.1| PREDICTED: RING finger protein 38 isoform 4 [Papio anubis]
gi|402896971|ref|XP_003911551.1| PREDICTED: RING finger protein 38 isoform 5 [Papio anubis]
gi|426361765|ref|XP_004048070.1| PREDICTED: RING finger protein 38 isoform 3 [Gorilla gorilla
gorilla]
gi|426361767|ref|XP_004048071.1| PREDICTED: RING finger protein 38 isoform 4 [Gorilla gorilla
gorilla]
gi|426361769|ref|XP_004048072.1| PREDICTED: RING finger protein 38 isoform 5 [Gorilla gorilla
gorilla]
gi|21666412|gb|AAM73697.1|AF394047_1 RING finger protein 38 [Homo sapiens]
gi|67968671|dbj|BAE00694.1| unnamed protein product [Macaca fascicularis]
gi|119578709|gb|EAW58305.1| ring finger protein 38 [Homo sapiens]
gi|123997119|gb|ABM86161.1| ring finger protein 38 [synthetic construct]
gi|157928809|gb|ABW03690.1| ring finger protein 38 [synthetic construct]
gi|380785195|gb|AFE64473.1| RING finger protein 38 isoform 1 [Macaca mulatta]
gi|380785197|gb|AFE64474.1| RING finger protein 38 isoform 1 [Macaca mulatta]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|417399951|gb|JAA46956.1| Putative e3 ubiquitin-protein ligase rnf13 isoform 1 [Desmodus
rotundus]
Length = 381
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|359074870|ref|XP_003587226.1| PREDICTED: LOW QUALITY PROTEIN: zinc/RING finger protein 3 [Bos
taurus]
Length = 731
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 109 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLVKIKLKQRRSQNSMNRLAV-QAL 159
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KF SK G EG A T S C ICL KY+D +EL
Sbjct: 160 EKMETRKFNSKSKGR---------REGSCGALDTLSSSSTS----DCAICLEKYIDGEEL 206
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
>gi|403373898|gb|EJY86877.1| C3HC4-type RING finger domain-containing protein [Oxytricha
trifallax]
Length = 326
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 38/185 (20%)
Query: 244 WFVV-GNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATI-CCCLPCIISVL 301
WF + G +IF S L+ +F+ + A+ + AT+ CCLPCI L
Sbjct: 165 WFTLYGMTYIF---SENCHGFYLHYFNSLFIVLYGLNVAVIVCVMATLLVCCLPCICMAL 221
Query: 302 GIREDYSQTRGATAET-INALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
R T ET IN+L K+ DN+ +
Sbjct: 222 MQRRSQQITTQKIKETLINSLVRTKY-----------DNT------------------AF 252
Query: 361 EDAVCCICLAKYVDDDELRELICS--HVFHVDCVDKWLKINASCPLCKSEIGDSS-SPLV 417
++ C ICL K+ DD E+ L C H FH DC+ W + N CPLCK++I L
Sbjct: 253 KNDECAICLGKFDDDSEVTPLPCDIRHYFHTDCITDWFRQNNVCPLCKTQISKQDMDKLQ 312
Query: 418 QDSAQ 422
QD Q
Sbjct: 313 QDLPQ 317
>gi|395527967|ref|XP_003766107.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Sarcophilus harrisii]
Length = 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|225463026|ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
Length = 542
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 359 SGED-AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
SGED A C ICLA+Y + D++R L C H +H+ CVDKWLK I+ CPLC+ ++
Sbjct: 473 SGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDV 525
>gi|224088434|ref|XP_002186805.1| PREDICTED: RING finger protein 38-like [Taeniopygia guttata]
Length = 475
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 386 LAERLGEAKLRGLTKADIEQLPSYRF------NPNNHQS--------------------- 418
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 419 EQKLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 469
>gi|77736109|ref|NP_001029753.1| RING finger protein 38 [Bos taurus]
gi|426220204|ref|XP_004004306.1| PREDICTED: RING finger protein 38 isoform 1 [Ovis aries]
gi|426220206|ref|XP_004004307.1| PREDICTED: RING finger protein 38 isoform 2 [Ovis aries]
gi|74355024|gb|AAI02725.1| Ring finger protein 38 [Bos taurus]
gi|296484700|tpg|DAA26815.1| TPA: ring finger protein 38 [Bos taurus]
Length = 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|410914174|ref|XP_003970563.1| PREDICTED: RING finger protein 44-like [Takifugu rubripes]
Length = 440
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F ++ +
Sbjct: 351 LAERLGEAKPRGLTKADIEQLPSYRFNAENH---------------------------LS 383
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ D
Sbjct: 384 EQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASD 434
>gi|147858550|emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
Length = 542
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 359 SGED-AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
SGED A C ICLA+Y + D++R L C H +H+ CVDKWLK I+ CPLC+ ++
Sbjct: 473 SGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDV 525
>gi|145527738|ref|XP_001449669.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417257|emb|CAK82272.1| unnamed protein product [Paramecium tetraurelia]
Length = 405
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 358 ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
I GE+ CC+CL Y D+ +RE IC H+FH C+ +W K N +CP+C+ E +S
Sbjct: 281 IIGEE--CCVCLNAYKKDEFVRESICHHIFHDQCLSEWTKKNTNCPVCRQEFSES 333
>gi|118384832|ref|XP_001025555.1| zinc finger protein [Tetrahymena thermophila]
gi|89307322|gb|EAS05310.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 770
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 320 ALPTYKFKS-------KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKY 372
A+P++K ++ K+N +D +N G + + G ++I C ICL
Sbjct: 381 AIPSHKMQASTLENLIKQNKEKHDSNNKGDAQLPYQSEGGNSNQII------CSICLQAI 434
Query: 373 VDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
++D+ RE IC H+FH +C+D W++ +CP+C+S
Sbjct: 435 QENDKYRETICKHLFHQECLDVWIQKQRNCPMCRS 469
>gi|297727027|ref|NP_001175877.1| Os09g0468300 [Oryza sativa Japonica Group]
gi|47497675|dbj|BAD19742.1| RING-H2 zinc finger protein ATL6-like [Oryza sativa Japonica Group]
gi|255678964|dbj|BAH94605.1| Os09g0468300 [Oryza sativa Japonica Group]
Length = 392
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
C +C++++ DD+ LR L CSHVFH DC+D WL +A+CP+C++ + D +S D A
Sbjct: 125 CAVCISEFDDDETLRLLPKCSHVFHQDCIDTWLASHATCPVCRANLVDGASEPASDVA 182
>gi|326679661|ref|XP_003201353.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Danio rerio]
Length = 750
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 26/105 (24%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
ED RG T E I+ L T + G +N + G
Sbjct: 666 EDEEHPRGLTKEQIDNLVTRTY-----GQVNLEGEQG---------------------RA 699
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y ++LR L C+H FH+ C+D+WL N +CP+C+ I
Sbjct: 700 CSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPI 744
>gi|195539967|gb|AAI67972.1| Unknown (protein for IMAGE:7068139) [Danio rerio]
Length = 711
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 26/105 (24%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV 364
ED RG T E I+ L T + G +N + G
Sbjct: 627 EDEEHPRGLTKEQIDNLVTRTY-----GQVNLEGEQG---------------------RA 660
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y ++LR L C+H FH+ C+D+WL N +CP+C+ I
Sbjct: 661 CSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPI 705
>gi|449469683|ref|XP_004152548.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL46-like
[Cucumis sativus]
Length = 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 354 KERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
K+ M E C +CL ++ D D LR L ICSH FH+ C+D WL N++CPLC++ + S
Sbjct: 128 KDIMGLKEPFDCAVCLYEFSDQDRLRLLPICSHAFHISCIDTWLLSNSTCPLCRATLLGS 187
Query: 413 SSP 415
S P
Sbjct: 188 SFP 190
>gi|334188355|ref|NP_200123.2| RING/U-box domain-containing protein-like protein [Arabidopsis
thaliana]
gi|332008921|gb|AED96304.1| RING/U-box domain-containing protein-like protein [Arabidopsis
thaliana]
Length = 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
E +R+ +DA C ICL++Y + LR + C H FH DC+D+WLK+N +CP+C++
Sbjct: 318 ESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRN 373
>gi|395816981|ref|XP_003781957.1| PREDICTED: RING finger protein 44 isoform 1 [Otolemur garnettii]
Length = 432
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L CSH FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCSHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|395505163|ref|XP_003756914.1| PREDICTED: RING finger protein 44 isoform 1 [Sarcophilus harrisii]
Length = 438
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 349 LAERLGEAKPRGLTKADIEQLPSYRFNPESH---------------------------QS 381
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 382 EQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 432
>gi|195054421|ref|XP_001994123.1| GH17353 [Drosophila grimshawi]
gi|193895993|gb|EDV94859.1| GH17353 [Drosophila grimshawi]
Length = 1665
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGAT E I N LP +K++ + + D+D EK C IC
Sbjct: 1564 RGATLEIIERNTLP-HKYRRVRRPSETDED-------------AEK----------CAIC 1599
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L+ + ++++R L C H+FH DCVD+WL N CP+C+ +I
Sbjct: 1600 LSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDI 1640
>gi|126338112|ref|XP_001363895.1| PREDICTED: e3 ubiquitin-protein ligase RNF13 [Monodelphis
domestica]
Length = 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|410914034|ref|XP_003970493.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Takifugu
rubripes]
Length = 661
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 606 TCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 651
>gi|224101167|ref|XP_002312167.1| predicted protein [Populus trichocarpa]
gi|222851987|gb|EEE89534.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 48/107 (44%), Gaps = 23/107 (21%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
RG + I ALP KS NL +N E CCICL
Sbjct: 75 RGLESTIIKALPITLHKS----NLGTSNNGTAVESE------------------CCICLG 112
Query: 371 KYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
+ D D L+ L C H FH DCVDKWL +SCPLC++ I S+ L
Sbjct: 113 VFEDGDRLKVLPQCQHCFHCDCVDKWLVTQSSCPLCRASIRAESAVL 159
>gi|449487867|ref|XP_004157840.1| PREDICTED: RING-H2 finger protein ATL46-like [Cucumis sativus]
Length = 354
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 354 KERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
K+ M E C +CL ++ D D LR L ICSH FH+ C+D WL N++CPLC++ + S
Sbjct: 128 KDIMGLKEPFDCAVCLYEFSDQDRLRLLPICSHAFHISCIDTWLLSNSTCPLCRATLLGS 187
Query: 413 SSP 415
S P
Sbjct: 188 SFP 190
>gi|125585208|gb|EAZ25872.1| hypothetical protein OsJ_09709 [Oryza sativa Japonica Group]
Length = 353
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 351 GTEKERMISGEDAV-CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSE 408
G K RM + + C +CLA++ D DELR L C HVFH DC+D WL +CPLC++
Sbjct: 118 GDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRAN 177
Query: 409 I 409
+
Sbjct: 178 L 178
>gi|422294236|gb|EKU21536.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
gi|422294277|gb|EKU21577.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
Length = 502
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
CCICL + D +R+L C HV+H +CVD W +N+ CPLCKS++ D
Sbjct: 262 CCICLTDFERTDLVRKLPCGHVYHSECVDCWFSVNSVCPLCKSDVRD 308
>gi|449269694|gb|EMC80445.1| RING finger protein 6 [Columba livia]
Length = 677
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +YV ++LR+L C H FH+ C+D+WL N++CP+C+ +
Sbjct: 623 TCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPV 668
>gi|213512162|ref|NP_001135282.1| ring finger protein 13 [Salmo salar]
gi|209155986|gb|ACI34225.1| RING finger protein 13 [Salmo salar]
Length = 380
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 33/137 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L + + +D + R + + + LP +K+K G++ D
Sbjct: 183 YLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYK---KGDVYD- 238
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 239 --------------------------VCAICLDEYEDGDQLRVLPCSHAYHSKCVDPWLT 272
Query: 397 KINASCPLCKSEIGDSS 413
K +CP+CK ++ S+
Sbjct: 273 KTKKTCPVCKQKVVPSA 289
>gi|449432054|ref|XP_004133815.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 382
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E R+ C ICL +Y+ D +R + C H FHVDC+D+WL++N+SCPLC++
Sbjct: 314 ESRRLPGPNGTTCSICLGEYLTKDTVRCIPECKHCFHVDCIDQWLRVNSSCPLCRNSPNP 373
Query: 412 SSSPL 416
S S L
Sbjct: 374 SPSHL 378
>gi|115451231|ref|NP_001049216.1| Os03g0188200 [Oryza sativa Japonica Group]
gi|75299922|sp|Q8H7N9.1|ATL31_ORYSJ RecName: Full=E3 ubiquitin-protein ligase Os03g0188200; AltName:
Full=RING-H2 finger protein Os03g0188200
gi|24756877|gb|AAN64141.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706584|gb|ABF94379.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113547687|dbj|BAF11130.1| Os03g0188200 [Oryza sativa Japonica Group]
gi|125542704|gb|EAY88843.1| hypothetical protein OsI_10314 [Oryza sativa Indica Group]
gi|215765044|dbj|BAG86741.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 353
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 351 GTEKERMISGEDAV-CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSE 408
G K RM + + C +CLA++ D DELR L C HVFH DC+D WL +CPLC++
Sbjct: 118 GDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRAN 177
Query: 409 I 409
+
Sbjct: 178 L 178
>gi|301120268|ref|XP_002907861.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102892|gb|EEY60944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 744
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGE 361
G R ++ RGA+A I+ LPTY F + K N DQ N
Sbjct: 657 GRRPHTTKARGASASLIHQLPTYTFSTAKEHN--DQGNPD-------------------- 694
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
C IC + +E++ L C H +H DCVD WL +N CP+C+
Sbjct: 695 ---CLICRCSFEVGEEIKSLPCFHSYHSDCVDSWLSLNKVCPVCQ 736
>gi|224053779|ref|XP_002297975.1| predicted protein [Populus trichocarpa]
gi|222845233|gb|EEE82780.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 356 RMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
R+ D C ICL++Y D LR + C+H FH +CVD+WLK+NA+CPLC++ SS
Sbjct: 302 RLPKPNDNTCPICLSEYQPKDTLRTIPNCNHYFHANCVDEWLKMNATCPLCRNSPDGSS 360
>gi|118386805|ref|XP_001026520.1| hypothetical protein TTHERM_00328560 [Tetrahymena thermophila]
gi|89308287|gb|EAS06275.1| hypothetical protein TTHERM_00328560 [Tetrahymena thermophila
SB210]
Length = 870
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
E I+G+ C ICL ++ D+++R+ IC+H FH C++ WL+ N +CP+C+ E G
Sbjct: 564 ESQINGKQT-CSICLIEFNSDEQIRQTICNHTFHSQCLNDWLQKNDNCPICRQEFG 618
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 547 TCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 592
>gi|357127647|ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like [Brachypodium
distachyon]
Length = 210
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 362 DAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
DA C +CL++ D D++REL C HVFHV+CVD WL+ +CPLC++
Sbjct: 112 DAECAVCLSELADGDKVRELPNCGHVFHVECVDAWLRSRTTCPLCRA 158
>gi|74007249|ref|XP_855008.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Canis lupus
familiaris]
Length = 625
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
SG C IC+ +Y + + LR L CSH FHV C+D WL N++CP+C+ ++
Sbjct: 565 SGALKACSICITEYTEGNRLRILPCSHEFHVHCIDHWLSENSTCPICRGQV 615
>gi|449512895|ref|XP_004164172.1| PREDICTED: uncharacterized LOC101213468, partial [Cucumis sativus]
Length = 532
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSS 413
++ S E A C ICL +Y + D +R L C H FH CVDKWLK I+ CPLC+ +I S
Sbjct: 465 QKHQSEEAAQCYICLVEYEEGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDICSRS 524
Query: 414 SPLVQD 419
L D
Sbjct: 525 DALSDD 530
>gi|38345496|emb|CAD41707.2| OSJNBa0010D21.9 [Oryza sativa Japonica Group]
gi|125549990|gb|EAY95812.1| hypothetical protein OsI_17683 [Oryza sativa Indica Group]
gi|125591860|gb|EAZ32210.1| hypothetical protein OsJ_16417 [Oryza sativa Japonica Group]
gi|215701084|dbj|BAG92508.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 667
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
E+ CCIC +YVD D+L L C H FHV CV +WL + +CP+CK+
Sbjct: 616 EEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPICKN 662
>gi|353440930|gb|AEQ94064.1| MIP32849p1 [Drosophila melanogaster]
Length = 333
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YKF + + +G
Sbjct: 200 LAERLGEAKPRGLTRNEIDQLPSYKFNPEVH---------------------------NG 232
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 233 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 283
>gi|345480478|ref|XP_003424157.1| PREDICTED: hypothetical protein LOC100678661 [Nasonia vitripennis]
Length = 612
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 359 SGEDAV--CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ ED + C ICL+++ +++ +R L C H+FH+DCVD+WL N+ CP+C+ +I
Sbjct: 548 NKEDTIEKCTICLSEFEENENVRRLPCMHLFHIDCVDQWLSTNSCCPICRVDI 600
>gi|292609636|ref|XP_695200.4| PREDICTED: RING finger protein 38 [Danio rerio]
Length = 673
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 584 LAERLGEAKPRGLTKADIEQLPSYRFNPSNH---------------------------QS 616
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 617 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 667
>gi|449465663|ref|XP_004150547.1| PREDICTED: uncharacterized protein LOC101213468 [Cucumis sativus]
Length = 587
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSS 413
++ S E A C ICL +Y + D +R L C H FH CVDKWLK I+ CPLC+ +I S
Sbjct: 520 QKHQSEEAAQCYICLVEYEEGDSMRVLPCHHEFHTTCVDKWLKEIHRVCPLCRGDICSRS 579
Query: 414 SPLVQD 419
L D
Sbjct: 580 DALSDD 585
>gi|47207180|emb|CAF92164.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 37/142 (26%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L + + +D + R + + + LP +K+K G+ D
Sbjct: 117 YLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPIHKYK---KGDSYD- 172
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 173 --------------------------VCAICLDEYEDGDKLRVLPCSHAYHSKCVDPWLT 206
Query: 397 KINASCPLCKSEI----GDSSS 414
K +CP+CK ++ GDS S
Sbjct: 207 KTKKTCPVCKQKVVPSQGDSDS 228
>gi|73993400|ref|XP_534526.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Canis lupus
familiaris]
gi|345790296|ref|XP_003433344.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Canis lupus
familiaris]
Length = 683
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 628 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSS 678
>gi|449441410|ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus]
Length = 275
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 310 TRGATAETINALPTYKFK---SKKNGNLNDQDNSGGT----EGGVLAAGTEKERMISGED 362
T + E INALP +K+K + + ++N Q +S + + V A G+ K S ++
Sbjct: 155 TPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESIEKRQDSVNAVGSTK---TSEDE 211
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
C +CL + + +R L C H FH +C+D WL+ +CP+CK
Sbjct: 212 LTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 255
>gi|380799985|gb|AFE71868.1| RING finger protein 165, partial [Macaca mulatta]
Length = 193
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICL 369
TRGA TI T+ K KK QD G + G + EK C ICL
Sbjct: 100 TRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESDTDEK----------CTICL 145
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 146 SMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 185
>gi|348535847|ref|XP_003455409.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Oreochromis
niloticus]
Length = 381
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 37/142 (26%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L + + +D + R + + + LP +K+K N +
Sbjct: 182 YLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDNYD---- 237
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
VC ICL +Y + D+LR L CSH +H CVD WL
Sbjct: 238 --------------------------VCAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLT 271
Query: 397 KINASCPLCKSEI----GDSSS 414
K +CP+CK ++ GDS S
Sbjct: 272 KTKKTCPVCKQKVVPSQGDSDS 293
>gi|119599264|gb|EAW78858.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|119599266|gb|EAW78860.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|119599268|gb|EAW78862.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|193786901|dbj|BAG52224.1| unnamed protein product [Homo sapiens]
Length = 262
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 64 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 114
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 115 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 153
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 154 KTKKTCPVCKQKV 166
>gi|115434650|ref|NP_001042083.1| Os01g0159300 [Oryza sativa Japonica Group]
gi|113531614|dbj|BAF03997.1| Os01g0159300 [Oryza sativa Japonica Group]
gi|215707150|dbj|BAG93610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|347737071|gb|AEP20518.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 501
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
E+ +D C ICL +Y D+ L L C+H FH DCV KWLK SCP+CKS
Sbjct: 446 EQQNDQDDGKCAICLEEYKDNSLLGILKCNHDFHTDCVKKWLKEKNSCPICKS 498
>gi|410947141|ref|XP_003980311.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Felis catus]
gi|410947143|ref|XP_003980312.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Felis catus]
Length = 683
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 629 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSS 678
>gi|193787520|dbj|BAG52726.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 350 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 382
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 383 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 433
>gi|348583071|ref|XP_003477298.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RNF6-like [Cavia porcellus]
Length = 641
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 586 VCSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 631
>gi|344284701|ref|XP_003414103.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Loxodonta africana]
Length = 685
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 630 KVCSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSS 680
>gi|363739122|ref|XP_003642121.1| PREDICTED: RING finger protein 44-like [Gallus gallus]
Length = 498
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 409 LAERLGEAKPRGLTKADIEHLPSYRFNPESH---------------------------QS 441
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 442 EQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 492
>gi|301777678|ref|XP_002924257.1| PREDICTED: RING finger protein 6-like [Ailuropoda melanoleuca]
gi|281345511|gb|EFB21095.1| hypothetical protein PANDA_013565 [Ailuropoda melanoleuca]
Length = 683
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 629 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSS 678
>gi|397519534|ref|XP_003829913.1| PREDICTED: RING finger protein 38 isoform 4 [Pan paniscus]
gi|426361771|ref|XP_004048073.1| PREDICTED: RING finger protein 38 isoform 6 [Gorilla gorilla
gorilla]
Length = 439
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 350 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 382
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 383 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 433
>gi|432878338|ref|XP_004073308.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 642
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F N N+ + E +C +
Sbjct: 560 AKLRGLTKGDIEQLPSYRF------NPNNHQS---------------------EQTLCVV 592
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C++ + LR L CSH FH CVDKWL+ N +CP+C+++ +
Sbjct: 593 CMSDFESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRADASE 636
>gi|78709024|gb|ABB47999.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|215766723|dbj|BAG98951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 371
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +C + + DDDELR L C H FH CVD WL+ N SCPLC++ I
Sbjct: 146 CAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSCPLCRASIA 192
>gi|449548744|gb|EMD39710.1| hypothetical protein CERSUDRAFT_81087 [Ceriporiopsis subvermispora B]
Length = 1129
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSE 408
C ICL Y +DELR + C H FH DCVDKWL++ +CP C+S+
Sbjct: 1074 CLICLDDYEANDELRLMTCKHAFHKDCVDKWLQVGRNNCPACRSK 1118
>gi|8570055|dbj|BAA96760.1| putative C-terminal zinc-finger [Oryza sativa Japonica Group]
gi|9757680|dbj|BAB08199.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187559|gb|EEC69986.1| hypothetical protein OsI_00495 [Oryza sativa Indica Group]
gi|222617777|gb|EEE53909.1| hypothetical protein OsJ_00461 [Oryza sativa Japonica Group]
Length = 488
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
E+ +D C ICL +Y D+ L L C+H FH DCV KWLK SCP+CKS
Sbjct: 433 EQQNDQDDGKCAICLEEYKDNSLLGILKCNHDFHTDCVKKWLKEKNSCPICKS 485
>gi|449468049|ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
gi|449531894|ref|XP_004172920.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
Length = 412
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 28/111 (25%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
G I +LP ++F + K GT+ G+ C +CL+K
Sbjct: 64 GIDKTVIESLPFFRFSTLK-----------GTKEGL----------------ECAVCLSK 96
Query: 372 YVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
+ D + LR L C H FH++C+D WL+ +ASCPLC+ +G L+ +S+
Sbjct: 97 FEDIEILRLLPKCKHAFHINCIDHWLEKHASCPLCRRRVGSEDLKLLSNSS 147
>gi|413945227|gb|AFW77876.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 527
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSPLV 417
S E A C ICL +Y + D LR L C H FH+ CVDKWLK I+ CPLC+ ++ S +P+
Sbjct: 465 SEEAAQCYICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSDAPIG 524
Query: 418 QDS 420
+ S
Sbjct: 525 KTS 527
>gi|410913829|ref|XP_003970391.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 578
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 489 LAERLGEAKLRGLTKGDIEQLPSYRF------NPNNHQS--------------------- 521
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C++ + LR L CSH FH CVDKWL+ N +CP+C+++ +
Sbjct: 522 EQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRADASE 572
>gi|255561042|ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
gi|223539211|gb|EEF40804.1| ring finger protein, putative [Ricinus communis]
Length = 316
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 26/105 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
S++RG +A+TI +LPT +K+ + N G + C I
Sbjct: 235 SESRGLSADTIASLPTVNYKAGSSQN--------------------------GTNDSCVI 268
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
C Y D + L L C H +H +C++ WLKIN CP+C +E+ S
Sbjct: 269 CRLDYEDGETLTLLSCKHSYHSECINNWLKINKVCPVCSTEVSTS 313
>gi|410909057|ref|XP_003968007.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Takifugu
rubripes]
Length = 519
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 331 NGNLNDQDNSGGTEGGV--LAAGTEKERMISGE-DAVCCICLAKYVDDDELRELICSHVF 387
N + +D+ + G T+ + LA T + + GE C +C+ +Y ++LR L CSH F
Sbjct: 432 NDDEDDEHHRGLTKEQIDNLATRTYGQASLEGEIGRACSVCINEYAQGNKLRRLPCSHEF 491
Query: 388 HVDCVDKWLKINASCPLCKSEI 409
H+ C+D+WL N +CP+C+ I
Sbjct: 492 HIHCIDRWLSENNTCPICRQPI 513
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 620 TCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 665
>gi|307136233|gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
Length = 275
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 310 TRGATAETINALPTYKFK---SKKNGNLNDQDNSGGT----EGGVLAAGTEKERMISGED 362
T + E INALP +K+K + + ++N Q +S + + V A G+ K S ++
Sbjct: 155 TPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESNEKRQDSVNAVGSTK---TSEDE 211
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
C +CL + + +R L C H FH +C+D WL+ +CP+CK
Sbjct: 212 LTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 255
>gi|356575434|ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 2
[Glycine max]
Length = 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 26/109 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K+ + + G + C I
Sbjct: 259 TESRGLSTDTIACLPSVNYKTGSDQH--------------------------GSNDSCVI 292
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ S S L
Sbjct: 293 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL 341
>gi|196009474|ref|XP_002114602.1| hypothetical protein TRIADDRAFT_64121 [Trichoplax adhaerens]
gi|190582664|gb|EDV22736.1| hypothetical protein TRIADDRAFT_64121 [Trichoplax adhaerens]
Length = 528
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 25/101 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG + I +LP++++ K E+E+ S C I
Sbjct: 449 NKRRGLSKTEIESLPSFRYADKP----------------------EEEKKASKG---CVI 483
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
C++ + D D LR L+C H FH C+D+WLK N +CP+C+ +
Sbjct: 484 CMSDFEDIDCLRVLMCKHEFHTSCIDRWLKTNRTCPICRGD 524
>gi|297286655|ref|XP_001108379.2| PREDICTED: RING finger protein 13 [Macaca mulatta]
Length = 246
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 48 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK--------- 98
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 99 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 137
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 138 KTKKTCPVCKQKV 150
>gi|291392915|ref|XP_002712839.1| PREDICTED: ring finger protein 6 [Oryctolagus cuniculus]
Length = 683
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 628 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSS 678
>gi|355716975|gb|AES05783.1| ring finger protein 6 [Mustela putorius furo]
Length = 435
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 381 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSS 430
>gi|224067536|ref|XP_002197442.1| PREDICTED: RING finger protein 44 [Taeniopygia guttata]
Length = 442
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 353 LAERLGEAKPRGLTKADIEHLPSYRFNPESH---------------------------QS 385
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 386 EQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 436
>gi|357129250|ref|XP_003566278.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 299
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 21/116 (18%)
Query: 312 GATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAK 371
G + + I ALPT+ ++S+ + GG G AA E C +CL +
Sbjct: 67 GLSMDDITALPTFTYRSRAPMT-PSRCGGGGKSKGREAAAVE-----------CVVCLQE 114
Query: 372 YVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCK--------SEIGDSSSPLVQ 418
D D +R L C H FH C+D WL+ +SCP+C+ + +G+ S PL Q
Sbjct: 115 LADGDVVRVLPACKHFFHGGCIDVWLRTRSSCPVCRAYPEPEAGARLGELSPPLPQ 170
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 294 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 339
>gi|255537789|ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
gi|223549860|gb|EEF51348.1| ring finger protein, putative [Ricinus communis]
Length = 392
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
E R+ D C ICL +Y + LR + C+H FH DC+D+WLK+NA+CPLC++
Sbjct: 299 ESRRLPKPNDNTCPICLCEYQPKETLRTIPECNHYFHADCIDEWLKMNATCPLCRN 354
>gi|413934155|gb|AFW68706.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 138
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 21/102 (20%)
Query: 342 GTEGG---VLAAGTEK----------ERMISGED-------AVCCICLAKYVDDDELREL 381
GTEGG +A GT K R G D CC+C++ D D++R L
Sbjct: 20 GTEGGSGVAVAVGTAKAVGAEQGERWRRRCGGHDDHPASAAGYCCVCISACRDGDDVRSL 79
Query: 382 ICSHVFHVDCVDKWLKI-NASCPLCKSEIGDSSSPLVQDSAQ 422
C H FH DCVD+WL + +CPLC+ +G + L + Q
Sbjct: 80 PCGHAFHRDCVDRWLALCRRTCPLCRLHVGGPAVGLAEQQQQ 121
>gi|125564055|gb|EAZ09435.1| hypothetical protein OsI_31707 [Oryza sativa Indica Group]
Length = 401
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
C +C++++ DD+ LR L CSHVFH DC+D WL +A+CP+C++ + D +S D A
Sbjct: 125 CAVCISEFDDDETLRLLPKCSHVFHQDCIDTWLASHATCPVCRANLVDGASEPASDVA 182
>gi|380815360|gb|AFE79554.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|170039241|ref|XP_001847450.1| ring finger protein [Culex quinquefasciatus]
gi|167862851|gb|EDS26234.1| ring finger protein [Culex quinquefasciatus]
Length = 539
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 27/106 (25%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG I+ LP+YKF ++ + +G
Sbjct: 448 LAERLGEAKPRGLARPEIDQLPSYKFNAETH---------------------------TG 480
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
+ C +C+ + LR L CSH FH CVDKWL+ N +CP+C+
Sbjct: 481 DQTSCVVCMCDFEARQVLRVLPCSHEFHAKCVDKWLRSNRTCPICR 526
>gi|395841991|ref|XP_003793805.1| PREDICTED: uncharacterized protein LOC100942711 [Otolemur
garnettii]
Length = 620
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 36/47 (76%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C+ +Y + ++LR L CSH +HV C+D+WL N++CP+C++++
Sbjct: 566 KICSVCITEYTEGNKLRVLPCSHEYHVHCIDRWLSDNSTCPICRNDV 612
>gi|383413211|gb|AFH29819.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
gi|384948634|gb|AFI37922.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 631 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|338728980|ref|XP_003365802.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Equus caballus]
Length = 627
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
C IC+ +Y +D EL L CSH +HV C+ +WL N++CP+C+ E+ DS
Sbjct: 573 CSICITEYTEDSELCILPCSHEYHVHCITRWLAENSTCPICRREVEDS 620
>gi|443722532|gb|ELU11354.1| hypothetical protein CAPTEDRAFT_180387 [Capitella teleta]
Length = 341
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 323 TYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAV--CCICLAKYVDDDELRE 380
+Y++K++ +D + + AA S D C ICL+ + D DE+R
Sbjct: 215 SYRYKTRATPPQDDAHATSSSPKNTTAAEATATAADSDVDTSERCTICLSDFEDSDEVRR 274
Query: 381 LICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
L C H+FH+ CVD WL N CP+C+ +I +S
Sbjct: 275 LPCMHLFHIGCVDTWLSSNRRCPICRVDIETAS 307
>gi|255583480|ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
gi|223527773|gb|EEF29874.1| ring finger protein, putative [Ricinus communis]
Length = 550
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 353 EKERMISGEDAV--CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
+KE + G D V C ICLA+Y + D++R L C H +H+ CVDKWLK I+ CPLC+ ++
Sbjct: 467 KKEDKVVGSDDVEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDV 526
>gi|187951087|gb|AAI38546.1| Ring finger protein (C3H2C3 type) 6 [Mus musculus]
Length = 667
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS---EIGDSSS 414
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ E G +SS
Sbjct: 613 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEFGATSS 666
>gi|17509463|ref|NP_493231.1| Protein TOE-4 [Caenorhabditis elegans]
gi|3880441|emb|CAB04890.1| Protein TOE-4 [Caenorhabditis elegans]
Length = 489
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 347 VLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
V A T+ E ++ C +CL+ + D + +++L C+HVFH +C+ KWL IN CP+C+
Sbjct: 419 VYAKKTDGEE----DEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCR 474
Query: 407 SEIGDSSS 414
EI S
Sbjct: 475 EEIDRPES 482
>gi|21311909|ref|NP_083050.1| E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
gi|367460080|ref|NP_001243014.1| E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
gi|367460084|ref|NP_001243016.1| E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
gi|81906111|sp|Q9DBU5.1|RNF6_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF6; AltName:
Full=RLIM-like protein
gi|12836151|dbj|BAB23526.1| unnamed protein product [Mus musculus]
gi|74212410|dbj|BAE30953.1| unnamed protein product [Mus musculus]
gi|74214016|dbj|BAE29425.1| unnamed protein product [Mus musculus]
Length = 667
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS---EIGDSSS 414
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ E G +SS
Sbjct: 613 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEFGATSS 666
>gi|323450871|gb|EGB06750.1| hypothetical protein AURANDRAFT_28873, partial [Aureococcus
anophagefferens]
Length = 65
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
ED CCICL ++ D++ +++L C H+FH++C+ KWL + CP C+ + D++
Sbjct: 11 EDNECCICLDEFEDEERIKKLRCGHLFHLNCIKKWLLADMRCPTCRQPVADAA 63
>gi|20530241|gb|AAK84435.1| RNF6 protein [Mus musculus]
gi|148673854|gb|EDL05801.1| ring finger protein (C3H2C3 type) 6, isoform CRA_b [Mus musculus]
gi|148673855|gb|EDL05802.1| ring finger protein (C3H2C3 type) 6, isoform CRA_b [Mus musculus]
Length = 667
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS---EIGDSSS 414
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ E G +SS
Sbjct: 613 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEFGATSS 666
>gi|432862383|ref|XP_004069828.1| PREDICTED: uncharacterized protein LOC101160975 [Oryzias latipes]
Length = 445
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 28/105 (26%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICL 369
+R + I PT KF S K +G T+ C IC
Sbjct: 360 SRKLSRREIQRFPTKKFHSAKT--------AGNTQ--------------------CQICF 391
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
Y D ++LR L C H +HV C+D+WLK N +CP+C++ + D SS
Sbjct: 392 CDYNDGEKLRMLPCFHDYHVQCIDRWLKDNTTCPICRANLADGSS 436
>gi|367460082|ref|NP_001243015.1| E3 ubiquitin-protein ligase RNF6 isoform 2 [Mus musculus]
Length = 678
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS---EIGDSSS 414
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ E G +SS
Sbjct: 624 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEFGATSS 677
>gi|356575432|ref|XP_003555845.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 1
[Glycine max]
Length = 335
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 26/109 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K+ + + G + C I
Sbjct: 253 TESRGLSTDTIACLPSVNYKTGSDQH--------------------------GSNDSCVI 286
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ S S L
Sbjct: 287 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL 335
>gi|145514974|ref|XP_001443392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410770|emb|CAK75995.1| unnamed protein product [Paramecium tetraurelia]
Length = 179
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 307 YSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCC 366
++Q ++ +N L + +N ++ G TE + ++ E MI + C
Sbjct: 81 WAQNLSEISDFLNILAHFT----ENLIFLEEQQQGATESQI-SSLREHVAMIEDQQQTCY 135
Query: 367 ICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
IC + D+ E+ CSH FH DC+ +WLKIN SCP+C+++I
Sbjct: 136 ICQEDFKQDETELEMSCSHNFHKDCLTQWLKINNSCPVCRTKIN 179
>gi|355754582|gb|EHH58483.1| E3 ubiquitin-protein ligase RNF6 [Macaca fascicularis]
Length = 701
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 647 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 692
>gi|348533399|ref|XP_003454193.1| PREDICTED: zinc/RING finger protein 3-like [Oreochromis niloticus]
Length = 895
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A + +
Sbjct: 185 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLIKIKLKQRRSQSSMNRMAI-QAL 235
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFK+K G +++S G + + S + C ICL KY+D +EL
Sbjct: 236 EKMETRKFKAKGKGQ---RESSCGA----------SDSLSSSSTSDCAICLEKYIDGEEL 282
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSEI 409
R + C+H FH CVD WL + +CP C+ I
Sbjct: 283 RVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 313
>gi|217075302|gb|ACJ86011.1| unknown [Medicago truncatula]
Length = 332
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 26/109 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K AG+++ G + C I
Sbjct: 250 TESRGLSTDTIACLPSVNYK----------------------AGSDQ----LGSNDSCVI 283
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ S S L
Sbjct: 284 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVFASGSNL 332
>gi|449451613|ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449496527|ref|XP_004160157.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 397
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 355 ERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI-GDS 412
E++I G D C ICL ++ DD+ LR L CSH FHV C+D WL+ + +CPLC++ + D
Sbjct: 158 EKLIDGSD--CSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDP 215
Query: 413 SSP 415
++P
Sbjct: 216 ATP 218
>gi|356533787|ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
Length = 367
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 365 CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C +CL ++ +D++LR + CSHVFH+DC+D WL+ NA+CPLC++ I +S
Sbjct: 137 CAVCLNEFQEDEKLRVIPNCSHVFHIDCIDVWLQSNANCPLCRTSISLTS 186
>gi|225437852|ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
Length = 351
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 257 SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAE 316
SSP+ L I L+ + + I CCL L R SQ+R
Sbjct: 30 SSPASDTAFPILAIAVLSIMATAFLLVSYYIFVIKCCLSWHHIELLRRFSTSQSRQQEDP 89
Query: 317 TINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDD 376
++ PT+ N L D+ + G +E G C +CL ++ + D
Sbjct: 90 LMDYSPTFL-----NRGL-DESLIHQIPTFLFRRGQSEEGSFHG----CVVCLNEFQEHD 139
Query: 377 ELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+R L CSH FH+DC+D WL+ NA+CPLC+S I ++
Sbjct: 140 MIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSISGTT 177
>gi|148673853|gb|EDL05800.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Mus musculus]
Length = 678
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS---EIGDSSS 414
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ E G +SS
Sbjct: 624 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEFGATSS 677
>gi|320583891|gb|EFW98104.1| hypothetical protein HPODL_0734 [Ogataea parapolymorpha DL-1]
Length = 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWL-KINASCPLCKSEI 409
+C ICL +DDDE+R LIC HVFH DCVD WL CP+CK +
Sbjct: 127 MCAICLDNLLDDDEVRGLICGHVFHADCVDPWLVNRRGCCPMCKRDF 173
>gi|194746673|ref|XP_001955801.1| GF16054 [Drosophila ananassae]
gi|190628838|gb|EDV44362.1| GF16054 [Drosophila ananassae]
Length = 854
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I+ LP+YK+ + +G
Sbjct: 718 LAERLGEAKPRGLTRNEIDQLPSYKYNPD---------------------------VHNG 750
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ + C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 751 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 801
>gi|109120346|ref|XP_001117726.1| PREDICTED: RING finger protein 6 isoform 1 [Macaca mulatta]
gi|297274140|ref|XP_002800734.1| PREDICTED: RING finger protein 6 isoform 2 [Macaca mulatta]
gi|297274142|ref|XP_002800735.1| PREDICTED: RING finger protein 6 isoform 3 [Macaca mulatta]
gi|355700880|gb|EHH28901.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 701
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 647 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 692
>gi|67969356|dbj|BAE01030.1| unnamed protein product [Macaca fascicularis]
Length = 701
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 647 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 692
>gi|157137022|ref|XP_001656980.1| ring finger protein [Aedes aegypti]
gi|108884247|gb|EAT48472.1| AAEL000523-PA [Aedes aegypti]
Length = 559
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 27/106 (25%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG I+ LP+YKF ++ + +G
Sbjct: 468 LAERLGEAKPRGLARPEIDQLPSYKFNAETH---------------------------TG 500
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
+ C +C+ + LR L CSH FH CVDKWL+ N +CP+C+
Sbjct: 501 DQTSCVVCMCDFEARQILRVLPCSHEFHAKCVDKWLRSNRTCPICR 546
>gi|118084993|ref|XP_417129.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Gallus gallus]
Length = 672
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +YV ++LR+L C H FH+ C+D+WL N++CP+C+ +
Sbjct: 618 TCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPV 663
>gi|149730038|ref|XP_001490895.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Equus caballus]
Length = 677
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 622 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 668
>gi|357439553|ref|XP_003590054.1| RING finger protein [Medicago truncatula]
gi|355479102|gb|AES60305.1| RING finger protein [Medicago truncatula]
Length = 321
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 25/103 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
S RG IN++P +K +K + G L +E C
Sbjct: 90 SDHRGLEQSVINSIPVIHYKLEK-------------DYGELGISSE-----------CAF 125
Query: 368 CLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
CL+++ +D++LR + C+H+FH+DCVD WL+ NA+CPLC+ ++
Sbjct: 126 CLSEFQEDEKLRVIPNCNHLFHIDCVDIWLQNNANCPLCRRKV 168
>gi|393909281|gb|EFO18865.2| ring finger-H2 protein [Loa loa]
Length = 505
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 26/99 (26%)
Query: 312 GATAETINALPT-YKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
GAT E IN T YK+ + + N+Q+ C +CL
Sbjct: 421 GATVEQINRFSTTYKYIKENDIPENEQER-------------------------CTVCLN 455
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ D+E+R L CSHVFH+ C+D+WL N CP+C+ ++
Sbjct: 456 DFEMDEEVRALRCSHVFHIVCIDRWLVYNKKCPVCRLDV 494
>gi|51476208|emb|CAH18094.1| hypothetical protein [Homo sapiens]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|363807828|ref|NP_001242183.1| uncharacterized protein LOC100805963 [Glycine max]
gi|255634943|gb|ACU17830.1| unknown [Glycine max]
Length = 192
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG T E I++LP K+K G L + ER C I
Sbjct: 107 TQSRGLTQEQISSLPVSKYKC----------------GFFLRKKSRDER--------CVI 142
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +Y DE L C HV+H C +KWL IN +CP+C +E+
Sbjct: 143 CQMEYKRGDERITLPCKHVYHASCGNKWLSINKACPICYTEV 184
>gi|347965741|ref|XP_321788.3| AGAP001358-PA [Anopheles gambiae str. PEST]
gi|333470373|gb|EAA43207.3| AGAP001358-PA [Anopheles gambiae str. PEST]
Length = 778
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 27/106 (25%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG I+ LP+YKF ++ + +G
Sbjct: 687 LAERLGEAKPRGLARPEIDQLPSYKFNAETH---------------------------TG 719
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
+ C +C+ + LR L CSH FH CVDKWL+ N +CP+C+
Sbjct: 720 DQTSCVVCMCDFEARQILRVLPCSHEFHAKCVDKWLRSNRTCPICR 765
>gi|297274144|ref|XP_002800736.1| PREDICTED: RING finger protein 6 isoform 4 [Macaca mulatta]
Length = 745
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 691 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 736
>gi|403254025|ref|XP_003919782.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403254027|ref|XP_003919783.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403254029|ref|XP_003919784.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Saimiri
boliviensis boliviensis]
gi|403254031|ref|XP_003919785.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|74228963|dbj|BAE21950.1| unnamed protein product [Mus musculus]
Length = 154
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD+ G + G +
Sbjct: 42 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDSKGKKDEGEESD 97
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 98 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 146
>gi|426374972|ref|XP_004054327.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Gorilla
gorilla gorilla]
gi|426374974|ref|XP_004054328.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Gorilla
gorilla gorilla]
gi|426374976|ref|XP_004054329.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 3 [Gorilla
gorilla gorilla]
gi|426374978|ref|XP_004054330.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 4 [Gorilla
gorilla gorilla]
gi|426374980|ref|XP_004054331.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Gorilla
gorilla gorilla]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|5174653|ref|NP_005968.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|34305293|ref|NP_898864.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|34305295|ref|NP_898865.1| E3 ubiquitin-protein ligase RNF6 [Homo sapiens]
gi|13124536|sp|Q9Y252.1|RNF6_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF6
gi|4583652|emb|CAB40413.1| RING-H2 [Homo sapiens]
gi|4583654|emb|CAB40414.1| RING-H2 [Homo sapiens]
gi|12331002|gb|AAG49400.1| ring-H2 protein [Homo sapiens]
gi|21961523|gb|AAH34688.1| Ring finger protein (C3H2C3 type) 6 [Homo sapiens]
gi|119628785|gb|EAX08380.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628786|gb|EAX08381.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628787|gb|EAX08382.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|119628788|gb|EAX08383.1| ring finger protein (C3H2C3 type) 6, isoform CRA_a [Homo sapiens]
gi|123981156|gb|ABM82407.1| ring finger protein (C3H2C3 type) 6 [synthetic construct]
gi|124000631|gb|ABM87824.1| ring finger protein (C3H2C3 type) 6 [synthetic construct]
gi|189065505|dbj|BAG35344.1| unnamed protein product [Homo sapiens]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|397495091|ref|XP_003818395.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
gi|397495093|ref|XP_003818396.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
gi|397495095|ref|XP_003818397.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Pan paniscus]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|297821276|ref|XP_002878521.1| hypothetical protein ARALYDRAFT_324777 [Arabidopsis lyrata subsp.
lyrata]
gi|297324359|gb|EFH54780.1| hypothetical protein ARALYDRAFT_324777 [Arabidopsis lyrata subsp.
lyrata]
Length = 247
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + E I LPT K+K G + + ER C I
Sbjct: 163 TESRGLSQELIETLPTRKYKF----------------GSIFSRKRAGER--------CVI 198
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C KY D L C HV+H +C+ KWL IN CP+C SE+
Sbjct: 199 CQLKYKIGDRQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 240
>gi|296203583|ref|XP_002748980.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Callithrix
jacchus]
gi|296203585|ref|XP_002748981.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Callithrix
jacchus]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|226490958|ref|NP_001141061.1| uncharacterized protein LOC100273142 [Zea mays]
gi|194702454|gb|ACF85311.1| unknown [Zea mays]
gi|413939328|gb|AFW73879.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 510
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 460 CHICLTEYEDGDQIRTLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 505
>gi|47222931|emb|CAF99087.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+D+WL N++CP+C+ +
Sbjct: 632 TCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 677
>gi|4928399|gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana]
Length = 326
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 29/110 (26%)
Query: 315 AETINALPTYKFKS--KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKY 372
+ +++LP +KF S +++ ++N D C +CL+K+
Sbjct: 83 SSVLDSLPIFKFSSVTRRSSSMNSGD--------------------------CAVCLSKF 116
Query: 373 VDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
+D+LR L +C H FH DC+D WL N +CPLC+S + S S L++ A
Sbjct: 117 ESEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLA 166
>gi|10437428|dbj|BAB15050.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 243 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 275
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 276 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 326
>gi|343958212|dbj|BAK62961.1| hypothetical protein [Pan troglodytes]
Length = 332
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 243 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 275
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 276 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 326
>gi|224032341|gb|ACN35246.1| unknown [Zea mays]
gi|413937376|gb|AFW71927.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 347
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 339 NSGGTEGGVLAA-------GTEKERMISG-EDAV-CCICLAKYVDDDELREL-ICSHVFH 388
GG + +AA + R++ G EDA+ C +CL ++ DDD LR L C H FH
Sbjct: 84 RKGGLDAAAIAALPLVFFREVRQHRIVDGREDALECSVCLLEFDDDDALRLLPTCPHAFH 143
Query: 389 VDCVDKWLKINASCPLCKSEIGDSSSP 415
+C+ WL+ +A+CPLC++ + D + P
Sbjct: 144 PECIGLWLERHATCPLCRASVLDDAPP 170
>gi|149034870|gb|EDL89590.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149034872|gb|EDL89592.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 679
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 625 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPV 670
>gi|354502030|ref|XP_003513090.1| PREDICTED: RING finger protein 38 [Cricetulus griseus]
Length = 465
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 408
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 459
>gi|218191836|gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indica Group]
Length = 320
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 306 DYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVC 365
+ ++ RG I +LP ++++ D C
Sbjct: 108 EVAEPRGLEEAAIQSLPAFRYRKAIKDTTADSSE-------------------------C 142
Query: 366 CICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG--DSSSPLVQ 418
+C++++ +++ +R L C HVFHVDC+D WL+ NA+CPLC++ I DS PL Q
Sbjct: 143 AVCISEFQEEERVRLLPSCLHVFHVDCIDTWLQGNANCPLCRAAIATNDSQLPLDQ 198
>gi|114649066|ref|XP_509593.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 9 [Pan
troglodytes]
gi|114649068|ref|XP_001156347.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 5 [Pan
troglodytes]
gi|114649070|ref|XP_001156405.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 6 [Pan
troglodytes]
gi|114649072|ref|XP_001156461.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 7 [Pan
troglodytes]
gi|114649074|ref|XP_001156522.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 8 [Pan
troglodytes]
gi|410210058|gb|JAA02248.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410210060|gb|JAA02249.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410261394|gb|JAA18663.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410261396|gb|JAA18664.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410295664|gb|JAA26432.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
gi|410333895|gb|JAA35894.1| ring finger protein (C3H2C3 type) 6 [Pan troglodytes]
Length = 685
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 676
>gi|332263048|ref|XP_003280568.1| PREDICTED: RING finger protein 44 [Nomascus leucogenys]
Length = 423
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F D SG T
Sbjct: 334 LAERLGDAKPRGLTKADIEQLPSYRFNP-------DSHQSGQT----------------- 369
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 370 ---LCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 417
>gi|330804127|ref|XP_003290050.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
gi|325079850|gb|EGC33431.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
Length = 102
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 20/99 (20%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
+GAT I LP +K KN N ++N T + CCICL
Sbjct: 23 KGATNTEIIKLPVHKID--KNQATNPENNGPTT------------------NETCCICLC 62
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ + +E+R L C H FHV C+D+WLK+N CP+ K I
Sbjct: 63 EMENGEEVRTLPCKHFFHVTCIDQWLKVNKVCPVDKKAI 101
>gi|224043224|ref|XP_002192257.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Taeniopygia guttata]
Length = 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y ++LR+L C+H FH+ C+D+WL N++CP+C+ +
Sbjct: 610 TCSVCINEYATGNKLRQLPCAHEFHIHCIDRWLSENSTCPICRQPV 655
>gi|157820009|ref|NP_001100588.1| RING finger protein 6 [Rattus norvegicus]
gi|149034871|gb|EDL89591.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_b
[Rattus norvegicus]
gi|149034873|gb|EDL89593.1| ring finger protein (C3H2C3 type) 6 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 668
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 614 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPV 659
>gi|432930094|ref|XP_004081317.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oryzias latipes]
Length = 724
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y ++LR L CSH FH+ C+D+WL N +CP+C+ I
Sbjct: 673 ACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPI 718
>gi|432102802|gb|ELK30276.1| RING finger protein 44 [Myotis davidii]
Length = 457
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP Y+F + + E +C +
Sbjct: 375 AKPRGLTKADIEQLPAYRFNPDSHQS---------------------------EQTLCVV 407
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L CSH FH CVDKWLK N +CP+C+++ +
Sbjct: 408 CFSDFEARQLLRVLPCSHEFHTKCVDKWLKANRTCPICRADASE 451
>gi|402901609|ref|XP_003913738.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Papio
anubis]
Length = 701
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 647 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPV 692
>gi|168035662|ref|XP_001770328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678359|gb|EDQ64818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 312 GATAETINALPT--YKFKSKKNGNLNDQDNSGGTE-----------GGVLAAGTEKERMI 358
G + I+ LP YK +K Q +S G + L + E ++ +
Sbjct: 260 GMSDTDISRLPVRMYKGSVQKPAADQSQPSSKGEDPPCEEVVVDIVDASLESVDEGKQNV 319
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
E+ C +CL + VD + +R L C H FH C+D+WLK A+CP+CK I + +P
Sbjct: 320 VEEELTCSVCLEQVVDGEIIRTLPCVHQFHAACIDQWLKQQATCPVCKFRIREPETP 376
>gi|357625903|gb|EHJ76189.1| eIF2B-beta protein [Danaus plexippus]
Length = 1060
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 27/106 (25%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG I+ LP+YK+ E+ G
Sbjct: 971 LAERLGEAKPRGLARHEIDLLPSYKYS---------------------------EQTHQG 1003
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
E C +C+ ++ LR L C+H FH CVDKWL+ N +CP+C+
Sbjct: 1004 EQTSCVVCMCEFEARQTLRVLPCAHEFHAKCVDKWLRSNRTCPICR 1049
>gi|242040149|ref|XP_002467469.1| hypothetical protein SORBIDRAFT_01g028660 [Sorghum bicolor]
gi|241921323|gb|EER94467.1| hypothetical protein SORBIDRAFT_01g028660 [Sorghum bicolor]
Length = 399
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPL 416
C +C + + DDDELR L C H FH CVD WL+ N SCPLC++ I PL
Sbjct: 168 CAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSCPLCRASIALPHPPL 220
>gi|18855016|gb|AAL79708.1|AC087599_27 putative zinc finger protein [Oryza sativa Japonica Group]
Length = 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +C + + DDDELR L C H FH CVD WL+ N SCPLC++ I
Sbjct: 129 CAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSCPLCRASIA 175
>gi|351695469|gb|EHA98387.1| RING finger protein 6 [Heterocephalus glaber]
Length = 676
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 621 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 667
>gi|296087810|emb|CBI35066.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ R+ D C ICL++Y ++ +R + C+H FH DC+D+WL+++A+CP+C+S
Sbjct: 93 QSRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCFHADCIDEWLRMSATCPICRSSPAV 152
Query: 412 SSSP 415
S++P
Sbjct: 153 SAAP 156
>gi|3790591|gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
Length = 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 29/110 (26%)
Query: 315 AETINALPTYKFKS--KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKY 372
+ +++LP +KF S +++ ++N D C +CL+K+
Sbjct: 30 SSVLDSLPIFKFSSVTRRSSSMNSGD--------------------------CAVCLSKF 63
Query: 373 VDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
+D+LR L +C H FH DC+D WL N +CPLC+S + S S L++ A
Sbjct: 64 EPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLA 113
>gi|348575005|ref|XP_003473280.1| PREDICTED: RING finger protein 44-like [Cavia porcellus]
Length = 432
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNADSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG + I LP+Y++ + DN
Sbjct: 933 LAERLGEAKPRGMSKAKIEDLPSYRY---------NPDNH------------------QS 965
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
+ +C +C+ + + LR L C+H FH CVDKWLK N +CP+C+++ + +SP
Sbjct: 966 QQTLCVVCMCDFENRQLLRVLPCNHEFHAKCVDKWLKSNRTCPICRADASELASP 1020
>gi|395816983|ref|XP_003781958.1| PREDICTED: RING finger protein 44 isoform 2 [Otolemur garnettii]
Length = 351
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 262 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 294
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L CSH FH CVDKWLK N +CP+C+++ +
Sbjct: 295 EQTLCVVCFSDFEARQLLRVLPCSHEFHTKCVDKWLKANRTCPICRADASE 345
>gi|312086763|ref|XP_003145205.1| ring finger-H2 protein [Loa loa]
Length = 484
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 26/99 (26%)
Query: 312 GATAETINALPT-YKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
GAT E IN T YK+ + + N+Q+ C +CL
Sbjct: 400 GATVEQINRFSTTYKYIKENDIPENEQER-------------------------CTVCLN 434
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ D+E+R L CSHVFH+ C+D+WL N CP+C+ ++
Sbjct: 435 DFEMDEEVRALRCSHVFHIVCIDRWLVYNKKCPVCRLDV 473
>gi|432117387|gb|ELK37731.1| E3 ubiquitin-protein ligase RNF6 [Myotis davidii]
Length = 677
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
+L +D + RG T E I+ L T + + NS +E G
Sbjct: 588 LLNESDDDDRIRGLTKEQIDNLSTRNY----------EHNSIDSELG------------- 624
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ + SS
Sbjct: 625 ---KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRHPVLGSS 675
>gi|115465841|ref|NP_001056520.1| Os05g0596500 [Oryza sativa Japonica Group]
gi|55733884|gb|AAV59391.1| unknown protein [Oryza sativa Japonica Group]
gi|57900673|gb|AAW57798.1| unknown protein [Oryza sativa Japonica Group]
gi|113580071|dbj|BAF18434.1| Os05g0596500 [Oryza sativa Japonica Group]
gi|215697912|dbj|BAG92154.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632790|gb|EEE64922.1| hypothetical protein OsJ_19782 [Oryza sativa Japonica Group]
Length = 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CLA++ D D LR L C H FH+DCVD+WL+ ASCPLC++ +
Sbjct: 124 CAVCLARFDDADLLRLLPRCRHAFHLDCVDRWLESKASCPLCRARV 169
>gi|348514454|ref|XP_003444755.1| PREDICTED: hypothetical protein LOC100696086 [Oreochromis
niloticus]
Length = 1005
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 916 LAERLGEAKLRGLTKGDIEQLPSYRF------NPNNHQS--------------------- 948
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C++ + LR L CSH FH CVDKWL+ N +CP+C+++ +
Sbjct: 949 EQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRADASE 999
>gi|301103480|ref|XP_002900826.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101581|gb|EEY59633.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 454
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
GED C IC +V +D L C+HVFH DCV W++ N SCPLCK EI
Sbjct: 403 GED-TCIICQYNFVPNDRAMTLPCAHVFHEDCVGGWIRENNSCPLCKREIS 452
>gi|260782279|ref|XP_002586217.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
gi|229271313|gb|EEN42228.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
Length = 619
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 26/99 (26%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
RG T E I+ LPT F ++N+ + C +C+
Sbjct: 543 RGLTKEQIDTLPTRTFSEPSR-----EENATNS---------------------CNVCIT 576
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
Y++ LR L C+H FH CVD+WL INASCP+C+ +
Sbjct: 577 DYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 615
>gi|225464029|ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Vitis
vinifera]
Length = 174
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ R+ D C ICL++Y ++ +R + C+H FH DC+D+WL+++A+CP+C+S
Sbjct: 93 QSRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCFHADCIDEWLRMSATCPICRSSPAV 152
Query: 412 SSSP 415
S++P
Sbjct: 153 SAAP 156
>gi|242018674|ref|XP_002429799.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514811|gb|EEB17061.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 125
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 24/101 (23%)
Query: 311 RGATAETI--NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCIC 368
RGA+ +TI N P + KKN +++D+ EK C IC
Sbjct: 36 RGASQDTIERNTFPHKYKRMKKNVEDSEEDH------------VEK----------CTIC 73
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
L+++ + +++R L C H+FH++CVD+WL N CP+C+ +I
Sbjct: 74 LSEFEELEDVRRLPCMHLFHIECVDQWLSTNKRCPICRVDI 114
>gi|15233298|ref|NP_191112.1| E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana]
gi|75311810|sp|Q9M2S6.1|SDIR1_ARATH RecName: Full=E3 ubiquitin-protein ligase SDIR1; AltName:
Full=Protein salt- and drought-induced RING finger1
gi|14423516|gb|AAK62440.1|AF386995_1 putative protein [Arabidopsis thaliana]
gi|7076796|emb|CAB75911.1| putative protein [Arabidopsis thaliana]
gi|30023760|gb|AAP13413.1| At3g55530 [Arabidopsis thaliana]
gi|222423557|dbj|BAH19748.1| AT3G55530 [Arabidopsis thaliana]
gi|332645876|gb|AEE79397.1| E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana]
Length = 273
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 306 DYSQTRGATAETINALPTYKFK--SKKNG-NLNDQDNSGGTEGGVLAAGTEKERMISGED 362
D T + E INALP +K+K +NG +L Q ++ + +L + E ++ E
Sbjct: 150 DNVSTTSMSEEEINALPVHKYKVLDPENGCSLAKQASTSSSAEKMLDSANESKKGTEDE- 208
Query: 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK----------SEIGDS 412
C +CL + + +R L C H FH C+D WL+ +CP+CK EI D
Sbjct: 209 LTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDD 268
Query: 413 SSPLV 417
+S +V
Sbjct: 269 ASDMV 273
>gi|357513019|ref|XP_003626798.1| RING finger protein [Medicago truncatula]
gi|355520820|gb|AET01274.1| RING finger protein [Medicago truncatula]
Length = 316
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQ 418
A C +CL+K+ + D LR L +C H FH +C+D WL+ N SCPLC++ I S S L +
Sbjct: 103 ADCAVCLSKFRNSDLLRSLPLCCHAFHAECIDTWLRSNLSCPLCRASILPSDSDLAK 159
>gi|293336774|ref|NP_001168563.1| uncharacterized protein LOC100382345 [Zea mays]
gi|223949189|gb|ACN28678.1| unknown [Zea mays]
gi|413924038|gb|AFW63970.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 22/102 (21%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG I ALP + ++ KK +L + +E C +
Sbjct: 120 AEPRGLEDAVIRALPAFSYR-KKPADLPPSAPAPASE--------------------CAV 158
Query: 368 CLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSE 408
CL ++ + D +R L C HVFHV CVD WL+ NASCPLC++
Sbjct: 159 CLGEFEEGDSVRMLPACLHVFHVGCVDAWLQGNASCPLCRAR 200
>gi|395505165|ref|XP_003756915.1| PREDICTED: RING finger protein 44 isoform 2 [Sarcophilus harrisii]
Length = 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 261 LAERLGEAKPRGLTKADIEQLPSYRFNPESH---------------------------QS 293
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 294 EQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 344
>gi|357147956|ref|XP_003574562.1| PREDICTED: RING-H2 finger protein ATL13-like [Brachypodium
distachyon]
Length = 509
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
Query: 345 GGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCP 403
G V+ GT+ E C +CL ++ DDD LR L CSH FHV+C+D WL +++CP
Sbjct: 143 GAVVGGGTK-------EPFDCAVCLCEFADDDRLRLLPKCSHAFHVECIDTWLLSHSTCP 195
Query: 404 LCK-------SEIGDSSSPLV 417
LC+ S G SPLV
Sbjct: 196 LCRRSLLADFSPCGGGCSPLV 216
>gi|402901611|ref|XP_003913739.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Papio
anubis]
Length = 755
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 701 ICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPV 746
>gi|281204915|gb|EFA79109.1| hypothetical protein PPL_07934 [Polysphondylium pallidum PN500]
Length = 628
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
CCICL++ ++E++ L C H FH+DC+D+WLK+N CP+ K I
Sbjct: 581 TCCICLSQMEVNEEVKTLPCLHFFHIDCIDQWLKVNKICPIDKQSI 626
>gi|334311222|ref|XP_001380922.2| PREDICTED: RING finger protein 44-like [Monodelphis domestica]
Length = 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 306 LAERLGEAKPRGLTKADIEQLPSYRFNPESH---------------------------QS 338
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 339 EQTLCVVCFSDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 389
>gi|242063536|ref|XP_002453057.1| hypothetical protein SORBIDRAFT_04g037520 [Sorghum bicolor]
gi|241932888|gb|EES06033.1| hypothetical protein SORBIDRAFT_04g037520 [Sorghum bicolor]
Length = 318
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG I ALP + ++ Q + +E C +
Sbjct: 134 AEPRGLEDAAIRALPAFSYRKTPANAAESQSAAPASE--------------------CAV 173
Query: 368 CLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKS 407
CL ++ + D +R L C HVFH+ CVD WL+ NASCPLC++
Sbjct: 174 CLGEFEEGDRVRMLPACLHVFHLGCVDAWLQSNASCPLCRA 214
>gi|414867806|tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 379
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLV 417
C +C + + DDDELR L C H FH CVD WL+ N SCPLC++ I PL
Sbjct: 155 CAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSCPLCRASIALPCPPLT 208
>gi|395514395|ref|XP_003761403.1| PREDICTED: RING finger protein 38 [Sarcophilus harrisii]
Length = 224
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F N N+ +
Sbjct: 135 LAERLGEAKPRGLTKADIEQLPSYRF------NPNNHQS--------------------- 167
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 168 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 218
>gi|449451741|ref|XP_004143619.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
sativus]
gi|449516467|ref|XP_004165268.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
sativus]
Length = 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG +A+TI +LP+ FK AG+++ +G + C I
Sbjct: 241 TESRGLSADTIASLPSINFK----------------------AGSDQ----TGSNDSCVI 274
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C + D + L L C H +H DCV WLKIN CP+C +E+
Sbjct: 275 CRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEV 316
>gi|354468545|ref|XP_003496713.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Cricetulus griseus]
gi|344237279|gb|EGV93382.1| RING finger protein 6 [Cricetulus griseus]
Length = 666
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
VC +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 612 VCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRQPV 657
>gi|116782843|gb|ABK22685.1| unknown [Picea sitchensis]
Length = 291
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 318 INALPTYKFKSKKNGNLNDQDNSGGTE--------GGVLAAGTEK--ERMISG------E 361
IN LP +K+K++ + + D + GT AGT+K I G E
Sbjct: 167 INTLPVHKYKTQSHQSPLDSQHGEGTSLQRQSSSCAVSKEAGTKKTDSENIEGSGKGREE 226
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
+ C +CL + + + +R L C H FH C+D WL+ A+CP+CK ++G
Sbjct: 227 ELTCSVCLEQVNEGELVRSLPCLHQFHASCIDPWLRQQATCPVCKFKVG 275
>gi|395859874|ref|XP_003802254.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Otolemur garnettii]
Length = 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +KFK
Sbjct: 182 YLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKK--------- 232
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
E VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 233 ---------------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLT 271
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 272 KTKKTCPVCKQKV 284
>gi|353231475|emb|CCD77893.1| putative zinc finger protein [Schistosoma mansoni]
Length = 372
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN-ASCPLCKSEIGDSSSPLVQDSAQ 422
VCCICL YVD D+LR L C H FH+ C+D WL N CP+C + +P V D +
Sbjct: 112 VCCICLEDYVDRDKLRLLPCQHAFHMKCIDPWLLCNRRRCPICNQIVELPGAPSVSDETE 171
>gi|224113387|ref|XP_002316478.1| predicted protein [Populus trichocarpa]
gi|222865518|gb|EEF02649.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 348 LAAGTEKERMISGEDAV----CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASC 402
L KE++ G+D+V C ICLA Y D D LR L C H+FH C+D WLK++ +C
Sbjct: 82 LVYSEAKEKLGKGDDSVAASCCSICLADYKDSDLLRLLPDCDHLFHAQCIDPWLKLHTTC 141
Query: 403 PLCKS 407
P+C++
Sbjct: 142 PMCRN 146
>gi|148670480|gb|EDL02427.1| ring finger protein 38, isoform CRA_a [Mus musculus]
Length = 465
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 376 LAERLGEAKPRGLTKADIEQLPSYRFNPSNH---------------------------QS 408
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 409 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 459
>gi|84781711|ref|NP_780410.2| RING finger protein 38 isoform 1 [Mus musculus]
gi|38173739|gb|AAH60730.1| Ring finger protein 38 [Mus musculus]
gi|38566244|gb|AAH62976.1| Ring finger protein 38 [Mus musculus]
Length = 464
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 375 LAERLGEAKPRGLTKADIEQLPSYRFNPSNH---------------------------QS 407
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 408 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 458
>gi|56749656|sp|Q8BI21.1|RNF38_MOUSE RecName: Full=RING finger protein 38
gi|26325586|dbj|BAC26547.1| unnamed protein product [Mus musculus]
Length = 518
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 429 LAERLGEAKPRGLTKADIEQLPSYRFNPSNH---------------------------QS 461
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 462 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 512
>gi|413944084|gb|AFW76733.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 27/110 (24%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
L +E+ +Q RG + + PT ++ + E +
Sbjct: 101 ALSRQEERNQQRGLDPAVVASFPTMRYADAR------------------------ELRVG 136
Query: 360 GEDAV--CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCK 406
G+DA C +CL+++ DD+ELR L CSH FH DC+ +WL + +CP+C+
Sbjct: 137 GKDAALECAVCLSEFEDDEELRLLPSCSHAFHPDCIGEWLAGHVTCPVCR 186
>gi|255571093|ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
gi|223534172|gb|EEF35888.1| ring finger protein, putative [Ricinus communis]
Length = 354
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQ 418
C +CL+K+ D+LR L +C H FH+ C+D WL N +CPLC+S I S S L++
Sbjct: 119 CAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTCPLCRSPIHASDSDLLK 173
>gi|356523880|ref|XP_003530562.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 352
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 348 LAAGTEKERMISGEDAV--CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPL 404
+A K+ I G V C +CL+++ DD+ +R L CSHVFH C+D WLK ++SCPL
Sbjct: 123 IAVFKYKKGSIGGSAGVTDCSVCLSEFEDDESVRLLPKCSHVFHAPCIDTWLKSHSSCPL 182
Query: 405 CKSEI---GDSSSPLVQDSAQ 422
C++ I S++P QD A+
Sbjct: 183 CRAGIFTFTSSAAPPPQDEAE 203
>gi|149726055|ref|XP_001502682.1| PREDICTED: RING finger protein 44 [Equus caballus]
Length = 432
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|431916794|gb|ELK16555.1| E3 ubiquitin-protein ligase rnf12-A [Pteropus alecto]
Length = 608
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 356 RMISGEDAV--CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
R DA+ C IC+ +Y + + LR L CSH +HV C+D+WL N +CP+C+ ++ DS
Sbjct: 543 RAFRSNDALKACGICITEYSEGNRLRILPCSHEYHVHCIDRWLAENTTCPICRGKVVDS 601
>gi|53733396|gb|AAH83548.1| Rnf38 protein [Rattus norvegicus]
gi|149045789|gb|EDL98789.1| ring finger protein 38, isoform CRA_a [Rattus norvegicus]
gi|149045790|gb|EDL98790.1| ring finger protein 38, isoform CRA_a [Rattus norvegicus]
Length = 432
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRFNPSNH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 426
>gi|15227929|ref|NP_181765.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
gi|68565335|sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL41; AltName:
Full=RING-H2 finger protein ATL41
gi|4567308|gb|AAD23719.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|18491287|gb|AAL69468.1| At2g42360/MHK10.8 [Arabidopsis thaliana]
gi|70905063|gb|AAZ14057.1| At2g42360 [Arabidopsis thaliana]
gi|110736438|dbj|BAF00187.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330255017|gb|AEC10111.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
Length = 236
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 27/100 (27%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
RG I +LPT+ + G GV A+ TE C +CL+
Sbjct: 80 RGLNPTVIASLPTF---------------TVGATDGVAASATE-----------CAVCLS 113
Query: 371 KYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
+ D+ REL C H+FHVDCVD WL ++CP+C++E+
Sbjct: 114 VLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEV 153
>gi|15232280|ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
gi|68565314|sp|Q9LY41.1|ATL4_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL4; AltName:
Full=Protein ARABIDOPSIS TOXICOS EN LEVADURA 4;
Short=Protein ATL4; AltName: Full=RING-H2 finger protein
ATL4; AltName: Full=RING-H2 finger protein RHX1a
gi|7576198|emb|CAB87859.1| RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana]
gi|66865934|gb|AAY57601.1| RING finger family protein [Arabidopsis thaliana]
gi|114050661|gb|ABI49480.1| At3g60220 [Arabidopsis thaliana]
gi|332646504|gb|AEE80025.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
Length = 334
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 29/110 (26%)
Query: 315 AETINALPTYKFKS--KKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKY 372
+ +++LP +KF S +++ ++N D C +CL+K+
Sbjct: 91 SSVLDSLPIFKFSSVTRRSSSMNSGD--------------------------CAVCLSKF 124
Query: 373 VDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
+D+LR L +C H FH DC+D WL N +CPLC+S + S S L++ A
Sbjct: 125 EPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLA 174
>gi|256071516|ref|XP_002572086.1| zinc finger protein [Schistosoma mansoni]
Length = 372
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN-ASCPLCKSEIGDSSSPLVQDSAQ 422
VCCICL YVD D+LR L C H FH+ C+D WL N CP+C + +P V D +
Sbjct: 112 VCCICLEDYVDRDKLRLLPCQHAFHMKCIDPWLLCNRRRCPICNQIVELPGAPSVSDETE 171
>gi|326677584|ref|XP_001920673.3| PREDICTED: RING finger protein 165-like [Danio rerio]
Length = 310
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 26/125 (20%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + +RGA TI T+ K KK L+ + E V
Sbjct: 199 AVRESYEELLQLEDRLGSVSRGAIQTTIERF-TFPHKYKKRKPLDLKFCENDEESDV--- 254
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
D C ICL+ D +++R L C H+FH CVD+WL + CP+C+ +I
Sbjct: 255 -----------DEKCTICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIQ 303
Query: 411 DSSSP 415
SP
Sbjct: 304 TQLSP 308
>gi|449680832|ref|XP_002156770.2| PREDICTED: RING finger protein 150-like [Hydra magnipapillata]
Length = 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDS 420
ED C +CL Y D + LREL C H+FH C+D WL + +CP+CKS I S + DS
Sbjct: 238 EDDTCAVCLESYKDGETLRELPCIHLFHKSCIDPWLLYHRTCPMCKSNILKSLGVELPDS 297
>gi|410949126|ref|XP_003981275.1| PREDICTED: RING finger protein 44 isoform 1 [Felis catus]
Length = 431
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 342 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 374
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 375 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 425
>gi|125527627|gb|EAY75741.1| hypothetical protein OsI_03653 [Oryza sativa Indica Group]
Length = 197
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 359 SGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
S DA+C ICL++Y D + LR + C H FHV C+D WL+ NASCP+C+S
Sbjct: 116 SDADAMCSICLSEYADGEMLRVMPDCRHRFHVSCLDAWLRRNASCPVCRS 165
>gi|47210135|emb|CAF95584.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
S +RGA TI T+ K KK L L G E+E + D C I
Sbjct: 270 SVSRGAVQTTIERF-TFPHKYKKRKPLQ------------LKIGGEEETDV---DEKCTI 313
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
CL+ D +++R L C H+FH CVD+WL + CP+C+ +I +P
Sbjct: 314 CLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLNP 361
>gi|311249623|ref|XP_003123707.1| PREDICTED: RING finger protein 44 isoform 1 [Sus scrofa]
Length = 432
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFHPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|399529262|gb|AFP44689.1| hypothetical protein [Eragrostis tef]
Length = 252
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 31/108 (28%)
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
++E + RG I +PT++++S G+ K+
Sbjct: 63 VQEQPASRRGLEEAAIRRIPTFRYQS----------------------GSNKQE------ 94
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CLA++ D + LR+L C H FH+DC+D WL+ A+CPLC++ +
Sbjct: 95 --CAVCLAEFRDGERLRQLPPCLHAFHIDCIDAWLQSTANCPLCRAAV 140
>gi|344265309|ref|XP_003404727.1| PREDICTED: RING finger protein 44 [Loxodonta africana]
Length = 432
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|242067120|ref|XP_002454849.1| hypothetical protein SORBIDRAFT_04g038490 [Sorghum bicolor]
gi|241934680|gb|EES07825.1| hypothetical protein SORBIDRAFT_04g038490 [Sorghum bicolor]
Length = 229
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 304 REDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDA 363
R RG I ALPT S N N ++ T +E
Sbjct: 94 RPSAQPPRGLEKAAIEALPTVSVSSSPNLN------------NLMKGRTREEE------- 134
Query: 364 VCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQ 418
C ICLA + + D+LR L C+H FH C+D WL +ASCP C++ I SPL +
Sbjct: 135 -CAICLAPFTEGDQLRVLPRCAHGFHAACIDTWLAAHASCPSCRATIVSVVSPLCR 189
>gi|47223363|emb|CAG04224.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 348 LAAGTEKERMISGE-DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
LA T + + GE C +C+ +Y ++LR L CSH FH+ C+D+WL N +CP+C+
Sbjct: 280 LATRTYGQASLEGEMGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICR 339
Query: 407 SEI 409
I
Sbjct: 340 QPI 342
>gi|115476656|ref|NP_001061924.1| Os08g0445000 [Oryza sativa Japonica Group]
gi|42407444|dbj|BAD10051.1| putative RING finger 1 [Oryza sativa Japonica Group]
gi|42408331|dbj|BAD09484.1| putative RING finger 1 [Oryza sativa Japonica Group]
gi|113623893|dbj|BAF23838.1| Os08g0445000 [Oryza sativa Japonica Group]
gi|125603581|gb|EAZ42906.1| hypothetical protein OsJ_27500 [Oryza sativa Japonica Group]
gi|215741364|dbj|BAG97859.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 501
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
C +CL ++ DDD LR L CSH FHVDC+D WL +++CPLC+ + SP
Sbjct: 153 CAVCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTCPLCRRSLLADFSP 204
>gi|125561712|gb|EAZ07160.1| hypothetical protein OsI_29407 [Oryza sativa Indica Group]
Length = 500
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
C +CL ++ DDD LR L CSH FHVDC+D WL +++CPLC+ + SP
Sbjct: 152 CAVCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTCPLCRRSLLADFSP 203
>gi|73953315|ref|XP_546217.2| PREDICTED: RING finger protein 44 isoform 1 [Canis lupus
familiaris]
Length = 431
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 342 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 374
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 375 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 425
>gi|297745339|emb|CBI40419.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 362 DAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
D+VC ICL +Y D + LR L C H FH+ CVD WLK+NASCP+C++
Sbjct: 181 DSVCSICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRN 227
>gi|357517417|ref|XP_003628997.1| RING finger protein [Medicago truncatula]
gi|355523019|gb|AET03473.1| RING finger protein [Medicago truncatula]
Length = 503
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 361 EDAV-CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSP 415
EDA C ICL +Y D D +R L C+H FH C+DKWLK I+ CPLC+ I S+SP
Sbjct: 440 EDATQCYICLVEYNDGDSVRVLPCNHEFHRTCIDKWLKEIHRVCPLCRGNICISNSP 496
>gi|256079620|ref|XP_002576084.1| ring finger protein 11 (sid 1669) (nedd4 ww domain-binding protein
2) [Schistosoma mansoni]
gi|353230819|emb|CCD77236.1| putative ring finger protein 11 (sid 1669) (nedd4 ww domain-binding
protein 2) [Schistosoma mansoni]
Length = 468
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C ICL +Y D D LR L C H FH+ C+D WLK + +CP C++ +
Sbjct: 227 CEICLIEYQDKDRLRHLPCGHAFHMKCIDSWLKQSTTCPKCRAGV 271
>gi|84781709|ref|NP_001034082.1| RING finger protein 38 isoform 2 [Mus musculus]
gi|74188535|dbj|BAE28022.1| unnamed protein product [Mus musculus]
gi|148670482|gb|EDL02429.1| ring finger protein 38, isoform CRA_c [Mus musculus]
Length = 432
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPSYRFNPSNH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 426
>gi|115449737|ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|48716363|dbj|BAD22974.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|48716498|dbj|BAD23103.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|113538071|dbj|BAF10454.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|222623928|gb|EEE58060.1| hypothetical protein OsJ_08900 [Oryza sativa Japonica Group]
Length = 320
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 359 SGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG--DSSSP 415
+ + + C +C++++ +++ +R L C HVFHVDC+D WL+ NA+CPLC++ I DS P
Sbjct: 136 TADSSECAVCISEFQEEERVRLLPSCLHVFHVDCIDTWLQGNANCPLCRAAIATNDSQLP 195
Query: 416 LVQ 418
L Q
Sbjct: 196 LDQ 198
>gi|225427655|ref|XP_002270708.1| PREDICTED: uncharacterized protein LOC100249371 [Vitis vinifera]
Length = 566
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSPLVQD 419
E A C ICL +Y + D +R L C H FH CVDKWLK I+ CPLC+ +I S S L ++
Sbjct: 507 EAAQCYICLVEYEEGDNMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDICRSGSLLAEN 566
>gi|6599239|emb|CAB63747.1| hypothetical protein [Homo sapiens]
Length = 366
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
+L +D + RG T E I+ L T + + NS +E G
Sbjct: 274 LLNESDDDDRIRGLTKEQIDNLSTRHY----------EHNSIDSELG------------- 310
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 311 ---KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 357
>gi|326680221|ref|XP_001923015.2| PREDICTED: hypothetical protein LOC561841 [Danio rerio]
Length = 474
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 344 EGGVLAAGT----EKERMI--------SGEDAVCCICLAKYVDDDELRELICSHVFHVDC 391
+G V+A T E ER+ S C IC ++Y + LR L C H +HV C
Sbjct: 390 QGAVMAKNTLSKAEIERLPIKTYDPTHSAGKTDCQICFSEYKAGERLRMLPCLHDYHVKC 449
Query: 392 VDKWLKINASCPLCKSEIGDS 412
+D+WLK NA+CP+C++++ +S
Sbjct: 450 IDRWLKENATCPICRADVSES 470
>gi|414875730|tpg|DAA52861.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 511
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
A C +CL++ D +++R L CSHVFHVDC+D WL+ +CP+C++E+
Sbjct: 141 ADCAVCLSELADGEKVRALPGCSHVFHVDCIDAWLRSRTTCPVCRAEV 188
>gi|255571091|ref|XP_002526496.1| ring finger protein, putative [Ricinus communis]
gi|223534171|gb|EEF35887.1| ring finger protein, putative [Ricinus communis]
Length = 484
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSPLVQDSA 421
C ICL Y + DE+R L CSH +HV CVDKWLK I+ CPLC+ GD +V+ SA
Sbjct: 422 CHICLVDYEEGDEIRVLPCSHEYHVSCVDKWLKEIHGVCPLCR---GDVCKGVVESSA 476
>gi|300794460|ref|NP_001179642.1| RING finger protein 44 [Bos taurus]
gi|296485561|tpg|DAA27676.1| TPA: ring finger protein 44 [Bos taurus]
Length = 432
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFHPDSHQS--------------------------- 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|40789045|dbj|BAA83052.2| KIAA1100 protein [Homo sapiens]
Length = 444
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 355 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 387
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 388 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 438
>gi|402873505|ref|XP_003900614.1| PREDICTED: RING finger protein 44 isoform 1 [Papio anubis]
Length = 432
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|326667695|ref|XP_684807.5| PREDICTED: zinc/RING finger protein 3 [Danio rerio]
gi|395455178|sp|A5WWA0.2|ZNRF3_DANRE RecName: Full=E3 ubiquitin-protein ligase ZNRF3; AltName:
Full=Zinc/RING finger protein 3; Flags: Precursor
Length = 868
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 256 HSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATA 315
H P P Y +FL F F++ + +C L I + R S R A
Sbjct: 180 HRPPRVRPTEYFDMGIFLAF--------FVVVSLVCLILLIKIKLKQRRSQSSMNRMAI- 230
Query: 316 ETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDD 375
+ + + T KFK+K G A+ + + S + C ICL KY+D
Sbjct: 231 QALEKMETCKFKAKFKGQRE-------------ASCGASDSVSSSSTSDCAICLEKYIDG 277
Query: 376 DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ELR + C+H FH CVD WL + +CP C+ I D
Sbjct: 278 EELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIID 313
>gi|255545852|ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
gi|223547072|gb|EEF48569.1| zinc finger protein, putative [Ricinus communis]
Length = 436
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
+G E IN PT+ + T K I E C +CL
Sbjct: 109 QGLDPEVINTFPTFLY------------------------STVKGHKIGKESLECAVCLN 144
Query: 371 KYVDDDELR-ELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
++ DD LR CSHVFH DC+D WL N +CP+C++ + L DS
Sbjct: 145 EFEDDQTLRLTPKCSHVFHPDCIDAWLASNTTCPVCRANLVPKPGDLAFDSV 196
>gi|377520133|ref|NP_001243687.1| RING finger protein 165 isoform 2 [Homo sapiens]
gi|410052644|ref|XP_003953329.1| PREDICTED: RING finger protein 165 isoform 1 [Pan troglodytes]
gi|426385861|ref|XP_004059416.1| PREDICTED: RING finger protein 165 [Gorilla gorilla gorilla]
gi|441602936|ref|XP_004087767.1| PREDICTED: RING finger protein 165 [Nomascus leucogenys]
gi|193783761|dbj|BAG53743.1| unnamed protein product [Homo sapiens]
Length = 154
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICL 369
TRGA TI T+ K KK QD G + G + EK C ICL
Sbjct: 61 TRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKDEGEESDTDEK----------CTICL 106
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 107 SMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 146
>gi|224113375|ref|XP_002316475.1| predicted protein [Populus trichocarpa]
gi|222865515|gb|EEF02646.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 348 LAAGTEKERMISGEDAV----CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASC 402
L KER+ G+D+V C ICLA Y D D LR L C+H+FH C+D W K++ +C
Sbjct: 81 LLYSEAKERLEKGDDSVAASNCSICLADYTDSDLLRLLPECNHLFHSQCIDPWFKLHTTC 140
Query: 403 PLCKS 407
P+C++
Sbjct: 141 PVCRN 145
>gi|357463959|ref|XP_003602261.1| RING finger protein [Medicago truncatula]
gi|355491309|gb|AES72512.1| RING finger protein [Medicago truncatula]
Length = 358
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKS 407
C +CL ++ D D +R L +CSH FH+DC+D WL+ +A+CPLC+S
Sbjct: 127 CAVCLLEFEDHDYVRTLPLCSHTFHLDCIDAWLRSHANCPLCRS 170
>gi|242787365|ref|XP_002480992.1| RING finger protein [Talaromyces stipitatus ATCC 10500]
gi|218721139|gb|EED20558.1| RING finger protein [Talaromyces stipitatus ATCC 10500]
Length = 824
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 345 GGVLAAGTEKERMIS-GEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINA-S 401
G ++A E ++ I+ GE C ICL+ Y DE+R+L C H++H +C+D+WL S
Sbjct: 739 GSLIAEALEGDQTINLGESERCLICLSDYEAADEVRQLAKCKHLYHKECIDQWLTTGRNS 798
Query: 402 CPLCK----SEIGDSSSPLVQDSA 421
CPLC+ +E SS+P+ A
Sbjct: 799 CPLCRGQGVTESSSSSNPMPTQEA 822
>gi|406862594|gb|EKD15644.1| RING finger domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKW-LKINASCPLCKSEI--GDSSSP 415
C IC+A +V+++E+R L CSH FH CVD W L ++ +CP+C+ E+ G SS+P
Sbjct: 183 CAICIADFVENEEVRLLPCSHTFHPACVDPWLLNVSGTCPICRYELEPGSSSNP 236
>gi|15226874|ref|NP_181045.1| E3 ubiquitin-protein ligase ATL9 [Arabidopsis thaliana]
gi|68565087|sp|O64763.1|ATL9_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL9; AltName:
Full=RING-H2 finger protein ATL9; Flags: Precursor
gi|3033395|gb|AAC12839.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|52627087|gb|AAU84670.1| At2g35000 [Arabidopsis thaliana]
gi|55167924|gb|AAV43794.1| At2g35000 [Arabidopsis thaliana]
gi|66865924|gb|AAY57596.1| RING finger family protein [Arabidopsis thaliana]
gi|110737534|dbj|BAF00709.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330253953|gb|AEC09047.1| E3 ubiquitin-protein ligase ATL9 [Arabidopsis thaliana]
Length = 378
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
RG AE I PT+ + K + GG E C +CL
Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIG----KGGVE--------------------CAVCLC 140
Query: 371 KYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
++ DD+ LR + C HVFH DCVD WL +++CPLC++++
Sbjct: 141 EFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL 180
>gi|410921626|ref|XP_003974284.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Takifugu
rubripes]
Length = 379
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 37/142 (26%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L + + +D + R + + + LP +K+K G+ D
Sbjct: 182 YLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPIHKYK---KGDSYD- 237
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
VC ICL +Y + D+LR L CSH +H CVD WL
Sbjct: 238 --------------------------VCAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLT 271
Query: 397 KINASCPLCKSEI----GDSSS 414
K +CP+CK ++ GDS S
Sbjct: 272 KTKKTCPVCKQKVVPSQGDSDS 293
>gi|294935942|ref|XP_002781567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892404|gb|EER13362.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 36/193 (18%)
Query: 233 FKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVF----LTFSCIGYAMPFILCA 288
K L+ FF W + G + H+ + LY F LT C G+ + + A
Sbjct: 196 LKSFLNLFFPAWLIYGQTLLVTSHTCSATNSSLYTCSAWFIGVGLTIWC-GFGIVALFGA 254
Query: 289 TICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL 348
T L ++ +R RGA+ + I+ +PT ++ S ++DQ+++ G
Sbjct: 255 TF---LLWMVRTGRLRAK----RGASPDVIDKIPTVQYDSTLF--VDDQNSADG------ 299
Query: 349 AAGTEKERMISGEDAVCCICLAKYVDD-DELRELICSHVFHVDCVDKWLKINASCPLCKS 407
S C IC Y D DE++ C H FH C+ WL +CPLC+S
Sbjct: 300 ----------SHPLNECSICFQNYSDSTDEIKHTPCDHYFHKSCLAHWLNTATTCPLCRS 349
Query: 408 EI-----GDSSSP 415
+ G +S P
Sbjct: 350 DFEEHYHGPASGP 362
>gi|296085485|emb|CBI29217.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSPLVQD 419
E A C ICL +Y + D +R L C H FH CVDKWLK I+ CPLC+ +I S S L ++
Sbjct: 439 EAAQCYICLVEYEEGDNMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDICRSGSLLAEN 498
>gi|15223679|ref|NP_172872.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|5080796|gb|AAD39306.1|AC007576_29 Unknown protein [Arabidopsis thaliana]
gi|28416613|gb|AAO42837.1| At1g14200 [Arabidopsis thaliana]
gi|110743241|dbj|BAE99511.1| hypothetical protein [Arabidopsis thaliana]
gi|332191000|gb|AEE29121.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 179
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 294 LPCIISVLGIREDYSQTRGATAETINA----LPTYKFKSKKNGNLNDQDNSGGTEGGVLA 349
LP I++ L RED +G+T +T P + ++G L+D + GG +G A
Sbjct: 29 LPVIVA-LAARED-DDDQGSTDQTTRRGDPLSPRFVMIGSRSG-LDDFFSDGGKQGRSPA 85
Query: 350 AGTEKE---RMISGED-----AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINAS 401
+E E R++ GED C ICL ++ D E+ C H FH CV++WL +A+
Sbjct: 86 LKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHAT 145
Query: 402 CPLCKSEI 409
CP+C+ E+
Sbjct: 146 CPMCRYEM 153
>gi|195606966|gb|ACG25313.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 512
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 466 CHICLNEYEDGDQIRTLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 511
>gi|7662486|ref|NP_055716.1| RING finger protein 44 [Homo sapiens]
gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING finger protein 44
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo sapiens]
gi|38969938|gb|AAH63297.1| Ring finger protein 44 [Homo sapiens]
gi|119605477|gb|EAW85071.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|119605478|gb|EAW85072.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|168269688|dbj|BAG09971.1| RING finger protein 44 [synthetic construct]
Length = 432
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|74191108|dbj|BAE39388.1| unnamed protein product [Mus musculus]
Length = 381
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPTYKFKSKKNGNLNDQ 337
Y +PF++ IC L I + +D + R + + LP +K K
Sbjct: 183 YLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPVHKIKK--------- 233
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL- 396
G E + VC ICL +Y D D+LR L CSH +H CVD WL
Sbjct: 234 -------------GDEYD--------VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLT 272
Query: 397 KINASCPLCKSEI 409
K +CP+CK ++
Sbjct: 273 KTKKTCPVCKQKV 285
>gi|326525757|dbj|BAJ88925.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 346
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 30/109 (27%)
Query: 308 SQTRGATAETINALP--TYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVC 365
+++RG +A+T+ +LP TYK K ++GN TE+ C
Sbjct: 263 TESRGLSADTLASLPSVTYKTKDMQDGN------------------TEQ----------C 294
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
IC ++ + + L L C+H +H DC+++WL+IN CP+C +E+ S++
Sbjct: 295 VICRVEFEEGESLVALPCNHSYHPDCINQWLQINKVCPMCSAEVSTSAN 343
>gi|291221742|ref|XP_002730880.1| PREDICTED: zinc and ring finger 3-like [Saccoglossus kowalevskii]
Length = 715
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 346 GVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLC 405
G L+ + + I+ + +C ICL ++ D DELR + CSH FH CVD WL N +CPLC
Sbjct: 246 GSLSNYSRESWSINSDSYICAICLEQFKDGDELRVVSCSHEFHRHCVDPWLIKNRTCPLC 305
Query: 406 KSEI 409
I
Sbjct: 306 LHNI 309
>gi|242089105|ref|XP_002440385.1| hypothetical protein SORBIDRAFT_09g030900 [Sorghum bicolor]
gi|241945670|gb|EES18815.1| hypothetical protein SORBIDRAFT_09g030900 [Sorghum bicolor]
Length = 473
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CLA++ D D LR L C H FH+DCVD+WL+ +ASCPLC++ +
Sbjct: 140 CSVCLARFDDADLLRLLPRCHHAFHLDCVDRWLQSSASCPLCRTSV 185
>gi|255540693|ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
gi|223550526|gb|EEF52013.1| protein binding protein, putative [Ricinus communis]
Length = 381
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 214 GNGQNALNFGGRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSS-PSDAPKLYRLCIVF 272
G Q F GR+ ++ + L F W ++G +W P + K L ++
Sbjct: 73 GWQQRYARFCGRI-AVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGFL--IW 129
Query: 273 LTFSCIGYAMPFILCATICCCLPCIIS-----VLGIREDYSQTRGATAETINALPTYKFK 327
L FS G +LC C C+ ++ +L ++ + + +P + F+
Sbjct: 130 LVFSYCG-----LLCIA-CMCMGKWLTRRQAHLLRAQQGIPISEYGVLVDMVRVPDWAFE 183
Query: 328 SKKNGNLNDQDNSGGTEGGVLAAGTEKE--------------RMISGEDAVCCICLAKYV 373
+ ++ G+ T++E + + + + C ICL ++
Sbjct: 184 AAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKTVPTDCSECPICLEEFH 243
Query: 374 DDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+E+R L C+H FHV+C+D+WL++N CP C+ +
Sbjct: 244 VGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSV 279
>gi|327286506|ref|XP_003227971.1| PREDICTED: RING finger protein 44-like [Anolis carolinensis]
Length = 445
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F + +
Sbjct: 356 LAERLGEAKPRGLTKADIEHLPSYRFNPESH---------------------------QS 388
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH C+DKWLK N +CP+C+++ +
Sbjct: 389 EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCIDKWLKANRTCPICRADASE 439
>gi|242087807|ref|XP_002439736.1| hypothetical protein SORBIDRAFT_09g019240 [Sorghum bicolor]
gi|241945021|gb|EES18166.1| hypothetical protein SORBIDRAFT_09g019240 [Sorghum bicolor]
Length = 535
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSP 415
S E A C ICL +Y + D LR L C H FH+ CVDKWLK I+ CPLC+ ++ S +P
Sbjct: 473 SDEAAQCYICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSDAP 530
>gi|410040033|ref|XP_001136491.3| PREDICTED: RING finger protein 44 isoform 2 [Pan troglodytes]
Length = 430
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 341 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 373
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 374 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 424
>gi|431920993|gb|ELK18762.1| RING finger protein 6 [Pteropus alecto]
Length = 678
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI-GDSSSP 415
+C +C++ YV ++LR L C H FH+ C+D+WL N +CP+C+ + G +P
Sbjct: 624 ICSVCISDYVAGNKLRRLPCMHEFHIHCIDRWLSENCTCPVCRQPVLGSGGAP 676
>gi|402594007|gb|EJW87934.1| hypothetical protein WUBG_01157 [Wuchereria bancrofti]
Length = 510
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 26/103 (25%)
Query: 312 GATAETINAL-PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
GAT E IN TYK+ + + N+Q+ C +CL
Sbjct: 426 GATVEQINRFSTTYKYIKENDIPENEQER-------------------------CTVCLN 460
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+ D+E+R L C+HVFHV C+D+WL N CP+C+ ++ ++
Sbjct: 461 DFEMDEEVRALRCNHVFHVVCIDRWLVYNKKCPVCRLDVDKTN 503
>gi|355716966|gb|AES05780.1| ring finger protein 44 [Mustela putorius furo]
Length = 431
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|145505561|ref|XP_001438747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405919|emb|CAK71350.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CL ++ +++++REL C H++H C+ WL+ N CPLCK+EI
Sbjct: 282 CSVCLFEFKEEEKVRELPCKHIYHSSCIKNWLQNNKQCPLCKTEI 326
>gi|449531896|ref|XP_004172921.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
Length = 422
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 41/161 (25%)
Query: 260 SDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCI------ISVLG---IREDYSQT 310
S P+ + + I L+ I ++M FIL C P + LG +R D S+
Sbjct: 31 SGIPQNFTIVIGILS---IMFSMVFILVVYAKFCHPTSHFRGEPQAHLGHGLLRSD-SRF 86
Query: 311 RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
G + I+ALP ++F S K G EG C +CL+
Sbjct: 87 SGVDQKVIDALPFFRFSSLK----------GSREG-----------------LECAVCLS 119
Query: 371 KYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
+ D + LR L C H FH+ C+D WL+ ++SCP+C+ IG
Sbjct: 120 NFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPICRCRIG 160
>gi|426351155|ref|XP_004043123.1| PREDICTED: RING finger protein 44 [Gorilla gorilla gorilla]
Length = 413
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 324 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 356
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 357 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 407
>gi|397470558|ref|XP_003806886.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Pan
paniscus]
Length = 432
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|294887191|ref|XP_002772001.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239875909|gb|EER03817.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 36/193 (18%)
Query: 233 FKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVF----LTFSCIGYAMPFILCA 288
K L+ FF W + G + H+ + LY F LT C G+ + + A
Sbjct: 196 LKSFLNLFFPAWLIYGQTLLVTSHTCSATNSSLYTCSAWFIGVGLTIWC-GFGIVALFGA 254
Query: 289 TICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVL 348
T L ++ +R RGA+ + I+ +PT ++ S ++DQ+++ G
Sbjct: 255 TF---LLWMVRTGRLRAK----RGASPDVIDKIPTVQYDSTLF--VDDQNSADG------ 299
Query: 349 AAGTEKERMISGEDAVCCICLAKYVDD-DELRELICSHVFHVDCVDKWLKINASCPLCKS 407
S C IC Y D DE++ C H FH C+ WL +CPLC+S
Sbjct: 300 ----------SHPLNECSICFQNYSDSTDEIKHTPCDHYFHKSCLAHWLNTATTCPLCRS 349
Query: 408 EI-----GDSSSP 415
+ G +S P
Sbjct: 350 DFEEHYHGPASGP 362
>gi|66800855|ref|XP_629353.1| hypothetical protein DDB_G0293132 [Dictyostelium discoideum AX4]
gi|60462716|gb|EAL60918.1| hypothetical protein DDB_G0293132 [Dictyostelium discoideum AX4]
Length = 766
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
D CCICL + D +R L C H FHV C+D+WLK+N CP+ K I +
Sbjct: 716 DVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK 766
>gi|348686535|gb|EGZ26350.1| hypothetical protein PHYSODRAFT_484474 [Phytophthora sojae]
Length = 472
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C IC +V DD L C+HVFH DCV W++ N SCPLCK EI
Sbjct: 424 TCIICQYSFVPDDRAMTLPCAHVFHEDCVGGWIRENNSCPLCKREI 469
>gi|225426346|ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
gi|297742332|emb|CBI34481.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E R+ D C ICL++Y D +R + C+H FHVDCVD+WLK+N +CP+C++
Sbjct: 301 ESMRLPKPSDGTCPICLSEYQPKDTIRTIPECNHCFHVDCVDEWLKMNPTCPVCRNSPDA 360
Query: 412 SS 413
SS
Sbjct: 361 SS 362
>gi|326488711|dbj|BAJ97967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
A C +CLA+ D DE REL C H+FH++CVD WL+ +CPLC++
Sbjct: 108 AECAVCLAELADGDEARELPNCGHLFHLECVDAWLRTRTTCPLCRA 153
>gi|260783467|ref|XP_002586796.1| hypothetical protein BRAFLDRAFT_102948 [Branchiostoma floridae]
gi|229271922|gb|EEN42807.1| hypothetical protein BRAFLDRAFT_102948 [Branchiostoma floridae]
Length = 518
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 295 PCIISVLGI---REDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAG 351
P + LGI + RG T E I+ LPT F ++N+ +
Sbjct: 423 PLTLVFLGIVISADGEDTPRGLTKEQIDTLPTRTFSEPSR-----EENATNS-------- 469
Query: 352 TEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ Y++ LR L C+H FH CVD+WL INASCP+C+ +
Sbjct: 470 -------------CNVCITDYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 514
>gi|170587844|ref|XP_001898684.1| ring finger-H2 protein [Brugia malayi]
gi|158593954|gb|EDP32548.1| ring finger-H2 protein, putative [Brugia malayi]
Length = 488
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 26/103 (25%)
Query: 312 GATAETINAL-PTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLA 370
GAT E IN TYK+ + + N+Q+ C +CL
Sbjct: 404 GATVEQINRFSTTYKYIKENDIPENEQER-------------------------CTVCLN 438
Query: 371 KYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
+ D+E+R L C+HVFHV C+D+WL N CP+C+ ++ ++
Sbjct: 439 DFEMDEEVRALRCNHVFHVVCIDRWLVYNKKCPVCRLDVDKTN 481
>gi|198434521|ref|XP_002131882.1| PREDICTED: similar to Ring finger protein 44 [Ciona intestinalis]
Length = 765
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 354 KERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
K + S + +C +C++++ LR L C H FH CVD+WL+ N +CP+C+ + G
Sbjct: 688 KPGLSSPDQPICVVCMSEWEPKQLLRVLPCKHEFHAKCVDRWLRSNRTCPICRGDAGQQR 747
Query: 414 S 414
S
Sbjct: 748 S 748
>gi|299473025|emb|CBN77418.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 458
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
C ICLA Y +++ ++ L C H FH DC+D WL++ A CPLCK+
Sbjct: 141 CAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCKA 183
>gi|119580171|gb|EAW59767.1| hCG40978, isoform CRA_a [Homo sapiens]
Length = 870
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI--GDSSSPLVQDSAQ 422
C ICL KY+D +ELR + C+H FH CVD WL + +CP C+ I GD + L + AQ
Sbjct: 297 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEGDPAGALPRPRAQ 356
>gi|363807100|ref|NP_001242079.1| uncharacterized protein LOC100793907 [Glycine max]
gi|255635155|gb|ACU17934.1| unknown [Glycine max]
Length = 248
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG T E I++LP K+K G L + ER C I
Sbjct: 163 TQSRGLTQEQISSLPVSKYKC----------------GFFLRKKSRDER--------CVI 198
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +Y D+ L C HV+H C +KWL IN +CP+C +E+
Sbjct: 199 CQMEYRRGDKRITLPCKHVYHASCGNKWLSINKACPICYTEV 240
>gi|255560019|ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
gi|223539865|gb|EEF41445.1| ring finger protein, putative [Ricinus communis]
Length = 374
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 354 KERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
KE M E C +CL +Y + D+LR L CSH FH+DC+D WL N++CPLC+ +
Sbjct: 132 KEIMGLKEPFDCAVCLCEYSEKDKLRLLPACSHAFHIDCIDTWLLSNSTCPLCRGTL 188
>gi|194373411|dbj|BAG56801.1| unnamed protein product [Homo sapiens]
Length = 329
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 300 VLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMIS 359
+L +D + RG T E I+ L T + + NS +E G
Sbjct: 237 LLNESDDDDRIRGLTKEQIDNLSTRHY----------EHNSIDSELG------------- 273
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 274 ---KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 320
>gi|357517007|ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
gi|355522814|gb|AET03268.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
Length = 356
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
C +CL+++ DD+ +R L +C+HVFH+ C+D WLK N+SCPLC+S + S++
Sbjct: 142 CSVCLSEFQDDESVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVFTSNA 192
>gi|393212464|gb|EJC97964.1| hypothetical protein FOMMEDRAFT_162307 [Fomitiporia mediterranea
MF3/22]
Length = 1002
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSE 408
C ICL +Y DD+LR L C H FH CVD+WLK +CP C++E
Sbjct: 943 CLICLDEYNPDDDLRLLTCKHTFHKGCVDRWLKTGRNNCPACRTE 987
>gi|356498148|ref|XP_003517915.1| PREDICTED: RING-H2 finger protein ATL51-like [Glycine max]
Length = 348
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 331 NGNLNDQDNSGGTEGGVLA--AGTEKERMISGEDAV--CCICLAKYVDDDELREL-ICSH 385
N L + D++ G + ++ A ++ I G V C +CL+++ DD+ +R L CSH
Sbjct: 103 NDTLPEHDSNTGLDEALIKSIAVFNYKKGIGGSAGVTDCSVCLSEFQDDESVRLLPKCSH 162
Query: 386 VFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421
VFH C+D WLK ++SCPLC++ I +S V+ A
Sbjct: 163 VFHAPCIDTWLKSHSSCPLCRAGIFTFTSSQVEVEA 198
>gi|354471971|ref|XP_003498214.1| PREDICTED: RING finger protein 44 isoform 2 [Cricetulus griseus]
Length = 433
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 344 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 376
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 377 EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 427
>gi|224109496|ref|XP_002315216.1| predicted protein [Populus trichocarpa]
gi|222864256|gb|EEF01387.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 314 TAETINALPTYKFK--SKKNG--NLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCC-IC 368
+ E INALP +K+K +NG ++ +S E G M S +D + C +C
Sbjct: 158 SEEEINALPVHKYKVTGPQNGGSSMQQASSSVSAEQKKQDTGNAIGSMKSSDDELTCSVC 217
Query: 369 LAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
L + + +R L C H FH +C+D WL+ +CP+CK G
Sbjct: 218 LEQVSMGEVIRTLPCLHQFHANCIDPWLRQQGTCPVCKFRAG 259
>gi|432854518|ref|XP_004067940.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Oryzias latipes]
Length = 375
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 43/145 (29%)
Query: 280 YAMPFILCATICCCLPCIISVLGIREDYSQTRGA-----TAETINALPTYKFKSKKNGNL 334
Y +PF+L IC L I+V I + R A + + LP +K++ G+
Sbjct: 182 YLLPFLLIVAICLIL---IAVFMITKAVQDCRKAWKSRLRKDQLKKLPIHKYQ---KGDS 235
Query: 335 NDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDK 394
D VC ICL +Y + D+LR L CSH +H CVD
Sbjct: 236 YD---------------------------VCAICLDEYEEGDKLRVLPCSHAYHSKCVDP 268
Query: 395 WL-KINASCPLCKSEI----GDSSS 414
WL K +CP+CK ++ GDS S
Sbjct: 269 WLTKTKKTCPVCKQKVVPSQGDSDS 293
>gi|297841961|ref|XP_002888862.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334703|gb|EFH65121.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 54/176 (30%)
Query: 254 GGHSSPSDA----PKLYRLCIVFLT-FSCIGYAMPFILCATICCCLPCIISVLGIREDYS 308
GG P D+ P + L IV ++ F +G+ +I C+ V+G+ DY
Sbjct: 48 GGSDVPGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRR--------CLERVMGM--DYG 97
Query: 309 --------------QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEK 354
Q RG A I PT+++ T K
Sbjct: 98 NPNDAGNWFATNLQQARGLDASVIETFPTFRY------------------------ATVK 133
Query: 355 ERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
I E C +CL ++ DD+ LR + C HVFH C+D WL +A+CPLC++++
Sbjct: 134 ALRIGKEALECPVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLHSHATCPLCRADL 189
>gi|15226553|ref|NP_179155.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42570793|ref|NP_973470.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|186500578|ref|NP_001118324.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|4335719|gb|AAD17397.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330251317|gb|AEC06411.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|330251318|gb|AEC06412.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|330251319|gb|AEC06413.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 704
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
CCIC +YV+ D L L C H FH DC+ +W+ I CP+CK+E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>gi|326498937|dbj|BAK02454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
A C +CLA+ D DE REL C H+FH++CVD WL+ +CPLC++
Sbjct: 108 AECAVCLAELADGDEARELPNCGHLFHLECVDAWLRTRTTCPLCRA 153
>gi|297295801|ref|XP_001091221.2| PREDICTED: RING finger protein 44-like [Macaca mulatta]
Length = 432
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSR---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 426
>gi|145507746|ref|XP_001439828.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407023|emb|CAK72431.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CL ++ +++++REL C H++H C+ WL+ N CPLCK+EI
Sbjct: 281 CSVCLFEFKEEEKVRELPCKHIYHSSCIKNWLQNNKQCPLCKTEI 325
>gi|10334499|emb|CAC10211.1| hypothetical protein [Cicer arietinum]
Length = 233
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG + +TI LP+ +K+ + + G + C I
Sbjct: 150 TESRGLSTDTIACLPSVNYKTGSDQH--------------------------GSNDSCVI 183
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C Y DD+ L L C H++H +C++ WLKIN CP+C +E+ SS
Sbjct: 184 CRVDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASS 229
>gi|119605476|gb|EAW85070.1| ring finger protein 44, isoform CRA_a [Homo sapiens]
Length = 408
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 319 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 351
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 352 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 402
>gi|357137455|ref|XP_003570316.1| PREDICTED: uncharacterized protein LOC100833892 isoform 1
[Brachypodium distachyon]
Length = 518
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 467 CHICLTEYEDGDQIRSLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 512
>gi|354471969|ref|XP_003498213.1| PREDICTED: RING finger protein 44 isoform 1 [Cricetulus griseus]
Length = 432
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|297744127|emb|CBI37097.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 30/112 (26%)
Query: 306 DYSQT---RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
DYS T RG I+ +PT+ F+ Q G G
Sbjct: 92 DYSPTFLNRGLDESLIHQIPTFLFR-------RGQSEEGSFHG----------------- 127
Query: 363 AVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C +CL ++ + D +R L CSH FH+DC+D WL+ NA+CPLC+S I ++
Sbjct: 128 --CVVCLNEFQEHDMIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSISGTT 177
>gi|222613291|gb|EEE51423.1| hypothetical protein OsJ_32501 [Oryza sativa Japonica Group]
Length = 318
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +C + + DDDELR L C H FH CVD WL+ N SCPLC++ I
Sbjct: 129 CAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSCPLCRASIA 175
>gi|397639438|gb|EJK73570.1| hypothetical protein THAOC_04794, partial [Thalassiosira oceanica]
Length = 541
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 335 NDQDNSGGTEGGVLAAGTEKER---MISGEDAVCCICLAKYVDDDELRELICSHVFHVDC 391
N +N G ++ + K R ++ D C +CL ++ D+ + L CSH FH +C
Sbjct: 463 NGTENRGASKEAIAKLKVSKVRNTAKLADCDDTCVVCLERFAKGDKRKVLACSHGFHPEC 522
Query: 392 VDKWLKINASCPLCKSEI 409
+DKWL N CP CK+++
Sbjct: 523 IDKWLNTNGVCPTCKAKV 540
>gi|226495451|ref|NP_001149296.1| LOC100282919 [Zea mays]
gi|195626142|gb|ACG34901.1| protein binding protein [Zea mays]
Length = 323
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 30/109 (27%)
Query: 308 SQTRGATAETINALP--TYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVC 365
++ RG +A+ + +LP TYK +S ++GN TE+ C
Sbjct: 240 TENRGLSADALASLPSVTYKMQSVQDGN------------------TEQ----------C 271
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
IC + D + L L C H++H +C+++WL+IN CP+C +E+ SS+
Sbjct: 272 VICRVELEDGESLIALPCKHLYHPECINQWLQINKVCPMCSAEVSTSSN 320
>gi|428181381|gb|EKX50245.1| hypothetical protein GUITHDRAFT_50560, partial [Guillardia theta
CCMP2712]
Length = 50
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
E C ICL ++ + +EL+ L C HVFH C+D+WL++++ CPLCK +
Sbjct: 1 EKPTCSICLGEFAEGEELKSLPCVHVFHCACIDQWLRLSSECPLCKRSV 49
>gi|357436767|ref|XP_003588659.1| RING finger protein [Medicago truncatula]
gi|355477707|gb|AES58910.1| RING finger protein [Medicago truncatula]
Length = 481
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCK 406
+D CCIC +YVD DE+ L C H FHV C++ WL++ CP CK
Sbjct: 424 DDTKCCICQEEYVDGDEVGRLQCVHKFHVLCIEDWLRLKNWCPFCK 469
>gi|413924199|gb|AFW64131.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 513
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 463 CHICLTEYEDGDQIRILPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 508
>gi|351715177|gb|EHB18096.1| E3 ubiquitin-protein ligase RLIM [Heterocephalus glaber]
Length = 466
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C IC+ Y +D++LR+L CSH +H C+D+WL N++CP+C+ +
Sbjct: 412 TCSICIRDYTEDNKLRKLPCSHEYHPHCIDRWLSENSTCPICRRTV 457
>gi|147832281|emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
Length = 641
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 362 DAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKS 407
D+VC ICL +Y D + LR L C H FH+ CVD WLK+NASCP+C++
Sbjct: 124 DSVCSICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRN 170
>gi|15233725|ref|NP_192651.1| putative RING-H2 finger protein ATL36 [Arabidopsis thaliana]
gi|68565318|sp|Q9M0R5.1|ATL36_ARATH RecName: Full=Putative RING-H2 finger protein ATL36; Flags:
Precursor
gi|7267555|emb|CAB78036.1| putative protein [Arabidopsis thaliana]
gi|332657324|gb|AEE82724.1| putative RING-H2 finger protein ATL36 [Arabidopsis thaliana]
Length = 345
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 284 FILCATICCCLPCI-----ISVLGIREDYSQTR-GATAETINALPTYKFKSKKNGNLNDQ 337
FI + CCL CI I G +S+ R G E I + PT+ + K +
Sbjct: 60 FISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGK- 118
Query: 338 DNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWL 396
GG E C ICL+++ D + LR + CSH FH +C+D WL
Sbjct: 119 ---GGVE--------------------CAICLSEFEDQETLRWMPPCSHTFHANCIDVWL 155
Query: 397 KINASCPLCKSEI 409
++CP+C++ +
Sbjct: 156 SSWSTCPVCRANL 168
>gi|225637509|ref|NP_001139497.1| RING finger protein 44 isoform 1 [Mus musculus]
Length = 432
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 343 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|356496420|ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
Length = 426
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 35/141 (24%)
Query: 278 IGYAMPFILCATICCCLPCIISVLGIREDY-------SQTRGATAETINALPTYKFKSKK 330
+ + + F L C C S +G E+ S+ G I +LP ++F S K
Sbjct: 47 VMFLLTFFLLMYAKFCQRCASSPVGDTENQLPFVRSRSRFSGIDKNVIESLPFFRFSSLK 106
Query: 331 NGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHV 389
G EG C +CL+K+ D + LR L C H FH+
Sbjct: 107 ----------GSKEG-----------------LECAVCLSKFEDVEILRLLPKCKHAFHI 139
Query: 390 DCVDKWLKINASCPLCKSEIG 410
DC+D WL+ ++SCP+C+ +
Sbjct: 140 DCIDHWLEKHSSCPICRHRVN 160
>gi|326510975|dbj|BAJ91835.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326513510|dbj|BAJ87774.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 36/173 (20%)
Query: 248 GNVWIFGGHSSPS-DAPKLYRLCIVFLTFSCIGYAMPFILCATICC-----CLPCIISVL 301
G ++G PS AP + L + TF IG+ F + C +P ++
Sbjct: 41 GRGVVYGARKPPSFSAPMVVLLVALIATFFFIGF---FSIYIRQCGRGNSPTIPAAAFLV 97
Query: 302 GIREDYSQT---RGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMI 358
R++ Q RG E + + P + + A EKE
Sbjct: 98 LSRQEQQQQARPRGLDPELVASFPAMTYAEAR-------------------ALREKEAGG 138
Query: 359 SGEDAV----CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCK 406
GED C +CL+++ D D+LR L CSH FH DC+ +WL + +CP+C+
Sbjct: 139 KGEDGTAVLECAVCLSEFEDGDQLRLLPKCSHAFHPDCIGEWLAGHVTCPVCR 191
>gi|359487286|ref|XP_002279794.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER [Vitis vinifera]
gi|297736239|emb|CBI24877.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q+RG + E IN LPT ++KS G + + ER C I
Sbjct: 163 TQSRGLSQEHINLLPTCRYKS----------------GRLFSRKRSAER--------CVI 198
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C Y D +L C HV+H DC KWL IN CP+C E+
Sbjct: 199 CQMGYKRGDRQIKLPCKHVYHTDCGTKWLTINKVCPVCNIEV 240
>gi|363743996|ref|XP_414696.3| PREDICTED: RING finger protein 165 [Gallus gallus]
Length = 401
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + +RGA TI T+ K KK Q+ E G +
Sbjct: 289 AVRESYEELLQLEDRLGSVSRGAVQNTIERF-TFPHKYKKR---RPQEGKAEQEDGEESD 344
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL + CP+C+ +I
Sbjct: 345 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQVCVDQWLATSKKCPICRVDI 393
>gi|384252332|gb|EIE25808.1| hypothetical protein COCSUDRAFT_60820 [Coccomyxa subellipsoidea
C-169]
Length = 1018
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICL 369
+RG + I+ALP K+ S+ +D + G E E+ C +C
Sbjct: 917 SRGVPQDIIDALPNAKYTSR----FSDAHPADGKE----------------EEEQCAVCR 956
Query: 370 AKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
++ + +R L CSHV+H DC+ +WL IN CP+C E+
Sbjct: 957 MEFEAGENVRLLPCSHVYHPDCIGQWLHINKVCPICSQEV 996
>gi|357512347|ref|XP_003626462.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
gi|355501477|gb|AES82680.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
Length = 249
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Query: 352 TEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKS 407
+E+E GE C +CL +Y D+D +R L CSH FH++C+D WL+ N SCPLC+S
Sbjct: 86 SEQEEESRGE---CVVCLEEYEDNDHIRILPFCSHTFHLNCIDVWLRSNPSCPLCRS 139
>gi|395328658|gb|EJF61049.1| hypothetical protein DICSQDRAFT_61475 [Dichomitus squalens LYAD-421
SS1]
Length = 705
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSEIGDSSS 414
C ICL Y +++LR + C HVFH DCVDKWL++ +CP C++++ SS
Sbjct: 648 CLICLDDYSPEEDLRLMTCKHVFHRDCVDKWLQVGRNNCPACRTKVRSQSS 698
>gi|357137459|ref|XP_003570318.1| PREDICTED: uncharacterized protein LOC100833892 isoform 3
[Brachypodium distachyon]
Length = 510
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 459 CHICLTEYEDGDQIRSLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 504
>gi|224088216|ref|XP_002308375.1| predicted protein [Populus trichocarpa]
gi|222854351|gb|EEE91898.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
ED C ICLA+Y + D++R L C H +H+ CVDKWLK I+ CPLC+ ++
Sbjct: 469 EDEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDV 518
>gi|357137457|ref|XP_003570317.1| PREDICTED: uncharacterized protein LOC100833892 isoform 2
[Brachypodium distachyon]
Length = 517
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 466 CHICLTEYEDGDQIRSLPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 511
>gi|297832036|ref|XP_002883900.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329740|gb|EFH60159.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 701
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSE 408
CCIC +YV+ D L L C H FH DC+ +W+ I CP+CK+E
Sbjct: 653 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 696
>gi|432872871|ref|XP_004072166.1| PREDICTED: E3 ubiquitin-protein ligase ZNRF3-like [Oryzias latipes]
Length = 870
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 259 PSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETI 318
P P Y +FL F F++ + +C L I + R S R A+ + +
Sbjct: 184 PPRQPTEYFDMGIFLAF--------FVVVSLVCLILLIKIKLKQRRSQSSMNRMAS-QAL 234
Query: 319 NALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDEL 378
+ T KFK+K G + G ++ + S + C ICL KY+D +EL
Sbjct: 235 EKMETRKFKAK--GKVQRDSGCGASD-----------SLSSSSTSDCAICLEKYMDGEEL 281
Query: 379 RELICSHVFHVDCVDKWLKINASCPLCKSE-IGDSSSP 415
R + C+H FH CVD WL + +CP C+ IG+ +P
Sbjct: 282 RVIPCAHRFHKRCVDPWLLQHHTCPHCRHNIIGEKGNP 319
>gi|357159651|ref|XP_003578515.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 337
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 30/109 (27%)
Query: 308 SQTRGATAETINALP--TYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVC 365
+++RG +A+T+ +LP TYK K ++GN TE+ C
Sbjct: 254 TESRGLSADTLASLPSVTYKTKDVQDGN------------------TEQ----------C 285
Query: 366 CICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414
IC ++ + + L L C H +H DC+++WL+IN CP+C +E+ S +
Sbjct: 286 VICRVEFEEGESLVALPCKHSYHPDCINQWLQINKVCPMCSAEVSTSEN 334
>gi|357472837|ref|XP_003606703.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355507758|gb|AES88900.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 268
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 310 TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDA------ 363
TR + E INALP +K K + G G + AA +++ GE+
Sbjct: 150 TRSMSEEEINALPIHKHKVTEGGP------PGSPYSSLEAAEIKQD--FKGEEGSANDQE 201
Query: 364 ---VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C ICL + + +R L C H FH C+D+WL+ +CP+CK +IG
Sbjct: 202 DGLTCAICLDQVQRGELVRSLPCLHQFHASCIDQWLRRKRTCPVCKFKIG 251
>gi|242036905|ref|XP_002465847.1| hypothetical protein SORBIDRAFT_01g046930 [Sorghum bicolor]
gi|241919701|gb|EER92845.1| hypothetical protein SORBIDRAFT_01g046930 [Sorghum bicolor]
Length = 317
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI-GDSSSPLVQD 419
C +CL ++ + L++L CSH FH+DC+D WL N SCPLC++ + G + P +D
Sbjct: 130 CAVCLGEFAPGERLKQLPTCSHAFHIDCIDTWLHHNVSCPLCRTVVTGGAVLPFARD 186
>gi|402873507|ref|XP_003900615.1| PREDICTED: RING finger protein 44 isoform 2 [Papio anubis]
Length = 351
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F + E +C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSH---------------------------QSEQTLCVV 301
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 302 CFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 345
>gi|242089661|ref|XP_002440663.1| hypothetical protein SORBIDRAFT_09g004760 [Sorghum bicolor]
gi|241945948|gb|EES19093.1| hypothetical protein SORBIDRAFT_09g004760 [Sorghum bicolor]
Length = 538
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
E A C ICL Y D + +L C H +H DC+ KWL++ +CP+CK+ D S
Sbjct: 482 ESARCVICLEDYKFKDSIGKLKCGHDYHADCIKKWLQVKNACPVCKASAADDS 534
>gi|308081112|ref|NP_001183423.1| uncharacterized protein LOC100501846 [Zea mays]
gi|238011374|gb|ACR36722.1| unknown [Zea mays]
Length = 505
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
C ICL +Y D D++R L C H FH+ CVDKWLK I+ CPLC+ ++
Sbjct: 455 CHICLTEYEDGDQIRILPCKHEFHLQCVDKWLKEIHRVCPLCRGDV 500
>gi|195444736|ref|XP_002070005.1| GK11818 [Drosophila willistoni]
gi|194166090|gb|EDW80991.1| GK11818 [Drosophila willistoni]
Length = 846
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG + I+ LP+YK+ + + +G
Sbjct: 714 LAERLGEAKPRGLSRNEIDQLPSYKYNPE---------------------------VHNG 746
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ C +C+ + LR L CSH FH CVDKWL+ N +CP+C+ D
Sbjct: 747 DQTSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 797
>gi|224104055|ref|XP_002313299.1| predicted protein [Populus trichocarpa]
gi|222849707|gb|EEE87254.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+Q++G + E I LPT K K G+ R SGE C I
Sbjct: 15 TQSKGLSPELIRLLPTSKCK----------------------FGSFFSRKKSGER--CVI 50
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C KY D+ +L+C HV+H +C+ KWL IN CP+C +E+
Sbjct: 51 CQMKYKRGDKQTKLMCKHVYHSECIAKWLGINKVCPVCNNEV 92
>gi|395520804|ref|XP_003764513.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Sarcophilus harrisii]
Length = 688
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 634 TCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 679
>gi|293333716|ref|NP_001168137.1| uncharacterized protein LOC100381884 [Zea mays]
gi|223943935|gb|ACN26051.1| unknown [Zea mays]
gi|223945405|gb|ACN26786.1| unknown [Zea mays]
gi|223946241|gb|ACN27204.1| unknown [Zea mays]
gi|413944545|gb|AFW77194.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 540
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E A C ICL Y +D + +L C+H +H DC+ KWL++ +CP+CK+ D
Sbjct: 484 ESARCVICLEDYKFEDSVGKLKCNHKYHADCIKKWLQVKNACPVCKASAAD 534
>gi|126327391|ref|XP_001366817.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Monodelphis domestica]
Length = 684
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 630 TCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPV 675
>gi|356498140|ref|XP_003517911.1| PREDICTED: RING-H2 finger protein ATL29-like [Glycine max]
Length = 315
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 41/174 (23%)
Query: 257 SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLG-------------- 302
SSP+ AP Y + F+ + F+ + + C C SV+
Sbjct: 10 SSPAAAP--YNTPPALIAFTLTVLVLCFVAFSIVYMCKYCFSSVIHTWAFQRTPSGSLIR 67
Query: 303 IREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED 362
+ S RG + + PT+ + S K+ +D G E
Sbjct: 68 LTPHRSPPRGLDPDLLQVFPTFPYSSVKDLR---KDQKYGLE------------------ 106
Query: 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415
C ICL ++ DD+ LR L +C HVFH DC+D WL+ + +CP+C+ ++ DS P
Sbjct: 107 --CAICLLEFEDDNVLRLLTLCCHVFHQDCIDLWLRSHKTCPVCRRDL-DSPPP 157
>gi|326493870|dbj|BAJ85397.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
+D C +CL +Y D+D L L C H FH DC+ KWL++ CP+CKS
Sbjct: 425 DDGRCLVCLEEYKDNDLLGVLKCRHDFHTDCIKKWLQVKNVCPVCKS 471
>gi|224081342|ref|XP_002306377.1| predicted protein [Populus trichocarpa]
gi|222855826|gb|EEE93373.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 26/106 (24%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
+++RG +A+TI +LP+ +K+ + N G + C I
Sbjct: 107 TESRGLSADTIASLPSINYKTGSSQN--------------------------GSNDSCVI 140
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C Y D + L L C H +H +C++ WLKIN +CP+C +E+ S+
Sbjct: 141 CRLDYEDGETLTLLSCKHSYHSECINNWLKINKACPVCNTEVSTSA 186
>gi|345305717|ref|XP_003428368.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 165-like
[Ornithorhynchus anatinus]
Length = 357
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + +RGA TI T+ K KK +D E
Sbjct: 245 AVRESYEELLQLEDRLGSVSRGAVQNTIERF-TFPHKYKKRRPQEGKDKKEDGEE----- 298
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
S D C ICL+ D +++R L C H+FH CVD+WL + CP+C+ +I
Sbjct: 299 --------SDTDEKCTICLSMLEDGEDVRRLPCMHLFHQVCVDQWLATSKKCPICRVDI 349
>gi|403290096|ref|XP_003936168.1| PREDICTED: RING finger protein 44 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 429
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 340 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 372
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 373 EQTLCVVCFSDFEVRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 423
>gi|225637511|ref|NP_001139498.1| RING finger protein 44 isoform 2 [Mus musculus]
gi|123784632|sp|Q3UHJ8.1|RNF44_MOUSE RecName: Full=RING finger protein 44
gi|74181211|dbj|BAE27859.1| unnamed protein product [Mus musculus]
Length = 407
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 318 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 350
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 351 EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 401
>gi|296193541|ref|XP_002806653.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Callithrix
jacchus]
Length = 562
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F
Sbjct: 473 LAERLGDAKPRGLTKADIEQLPSYRFNPDSR---------------------------QS 505
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 506 EQTLCVVCFSDFEVRQLLRVLXCNHEFHTKCVDKWLKANRTCPICRADASE 556
>gi|168036501|ref|XP_001770745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677963|gb|EDQ64427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 65
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSS 414
C ICL +Y D DE+R L C H +H DCVDKWLK ++ CPLC+ ++ D S
Sbjct: 2 CHICLVEYEDGDEIRVLPCQHEYHKDCVDKWLKEVHRVCPLCRGDVCDLKS 52
>gi|296084573|emb|CBI25594.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 359 SGED-AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEI 409
SGED A C ICLA+Y + D++R L C H +H+ CVDKWLK I+ CPLC+ ++
Sbjct: 111 SGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDV 163
>gi|389740520|gb|EIM81711.1| hypothetical protein STEHIDRAFT_142252 [Stereum hirsutum FP-91666
SS1]
Length = 1368
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSE 408
C ICL Y ++ELR + C H FH DCVDKWL+ +CP C+S+
Sbjct: 1296 CLICLEDYAPEEELRLMSCRHTFHKDCVDKWLETGRNNCPACRSQ 1340
>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo sapiens]
Length = 354
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F + E +C +
Sbjct: 272 AKPRGLTKADIEQLPSYRFNPDSH---------------------------QSEQTLCVV 304
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 305 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 348
>gi|355691874|gb|EHH27059.1| hypothetical protein EGK_17168 [Macaca mulatta]
Length = 350
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F
Sbjct: 261 LAERLGDAKPRGLTKADIEQLPSYRFNPDSR---------------------------QS 293
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 294 EQTLCVVCFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 344
>gi|357512355|ref|XP_003626466.1| RING finger-like protein [Medicago truncatula]
gi|355501481|gb|AES82684.1| RING finger-like protein [Medicago truncatula]
Length = 180
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 350 AGTEKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKS 407
A +E+E E C +CL ++ D++ +R L ICSH FH++C+D WL+ NASCP+C+S
Sbjct: 87 AKSEQEEEFRAE---CAVCLEEFQDNNHIRTLPICSHTFHLNCIDVWLRSNASCPVCRS 142
>gi|335283091|ref|XP_003354234.1| PREDICTED: RING finger protein 44 isoform 2 [Sus scrofa]
Length = 351
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F + E +C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFHPDSH---------------------------QSEQTLCVV 301
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 345
>gi|226510020|ref|NP_001151934.1| RING-H2 finger protein ATL3F [Zea mays]
gi|195651209|gb|ACG45072.1| RING-H2 finger protein ATL3F [Zea mays]
Length = 182
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 27/116 (23%)
Query: 297 IISVLGIREDYS----QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGT 352
++ V+ I ED S Q G A+ + ALP + +S++ EGGV A
Sbjct: 62 VVEVVRIVEDASVCGQQAAGLDAKALRALPVFTLESEQAKE----------EGGVAAE-- 109
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI--CSHVFHVDCVDKWLKINASCPLCK 406
+ G+ C +CL + ++D EL L+ C HVFHV+C+D WL ++++CP+C+
Sbjct: 110 -----LHGQ---CVVCLGE-MEDGELGRLLPGCRHVFHVECIDTWLGVSSTCPVCR 156
>gi|145518814|ref|XP_001445279.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412723|emb|CAK77882.1| unnamed protein product [Paramecium tetraurelia]
Length = 462
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
CC+CL +++ D+ RE C H FH +C+ W K N +CP+C+ E+G++
Sbjct: 339 CCVCLVQFLKRDQTRETPCKHYFHTNCLRDWTKKNTTCPVCRQELGEA 386
>gi|428173594|gb|EKX42495.1| hypothetical protein GUITHDRAFT_141168 [Guillardia theta CCMP2712]
Length = 1546
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 309 QTRGATAET-----INALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGED- 362
Q+ G TA ++ PT+KF K S EG + E G+D
Sbjct: 1387 QSGGVTAREQVQRFLDTFPTFKFDENKLPPSFSASRSSEAEG-------QTEGQTDGQDE 1439
Query: 363 ----AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C ICL + ++ R L C HVFH +C+D+WL ++ CPLCK +
Sbjct: 1440 EDNRPTCSICLGNFFTGEDCRMLPCLHVFHKNCIDQWLSMSQECPLCKRSV 1490
>gi|224097680|ref|XP_002311039.1| predicted protein [Populus trichocarpa]
gi|222850859|gb|EEE88406.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 273 LTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGATAETINALPTYKFKSKKNG 332
L + IG+ + + +C L C R + +R A + S+ N
Sbjct: 8 LVMTVIGFGVSTMFIVFVCTRLLCA------RIQMNASRRA----------FPIASRSNL 51
Query: 333 NLNDQDNSGGTEGGVLAAGTEK---ERMISG-EDAVCCICLAKYVDDDELREL-ICSHVF 387
+L ++ GG E LA K +++ S EDA C ICLA+Y DD LR L C H F
Sbjct: 52 SLLER---GGLEHVFLANFPTKKYNDKIFSASEDAQCTICLAEYHGDDILRILPYCGHSF 108
Query: 388 HVDCVDKWLKINASCPLCK 406
HV C+D WL+ +++CP+C+
Sbjct: 109 HVTCIDIWLQQHSTCPVCR 127
>gi|45382265|ref|NP_990159.1| E3 ubiquitin-protein ligase RLIM [Gallus gallus]
gi|4959046|gb|AAD34210.1|AF069993_1 LIM domain interacting RING finger protein [Gallus gallus]
Length = 593
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y + ++LR+L CSH +HV C+ +WL N++CP+C+ +
Sbjct: 538 TCSVCITEYTEGNKLRKLPCSHEYHVHCIARWLSENSTCPICRRAV 583
>gi|410949128|ref|XP_003981276.1| PREDICTED: RING finger protein 44 isoform 2 [Felis catus]
Length = 351
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F + E +C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSH---------------------------QSEQTLCVV 301
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 345
>gi|317419922|emb|CBN81958.1| RING finger protein 6, partial [Dicentrarchus labrax]
Length = 283
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C+ +Y ++LR L CSH FH+ C+D+WL N +CP+C+ I
Sbjct: 232 ACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPI 277
>gi|440900640|gb|ELR51723.1| E3 ubiquitin-protein ligase RNF6 [Bos grunniens mutus]
Length = 667
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 613 ACSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPV 658
>gi|194696146|gb|ACF82157.1| unknown [Zea mays]
gi|413944538|gb|AFW77187.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 182
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 27/116 (23%)
Query: 297 IISVLGIREDYS----QTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGT 352
++ V+ I ED S Q G A+ + ALP + +S++ EGGV A
Sbjct: 62 VVEVVRIVEDASVCGQQAAGLDAKALRALPVFTLESEQAKE----------EGGVAAE-- 109
Query: 353 EKERMISGEDAVCCICLAKYVDDDELRELI--CSHVFHVDCVDKWLKINASCPLCK 406
+ G+ C +CL + ++D EL L+ C HVFHV+C+D WL ++++CP+C+
Sbjct: 110 -----LHGQ---CVVCLGE-MEDGELGRLLPGCRHVFHVECIDTWLGVSSTCPVCR 156
>gi|403336896|gb|EJY67649.1| RING finger domain protein, putative [Oxytricha trifallax]
Length = 419
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 341 GGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA 400
G TE G + G+D C IC+ D+++ ELIC HVFH DC+D W K +
Sbjct: 351 GLTEAGFKKQKKITYKKKDGQDT-CSICIKNVAVDEQVYELICKHVFHEDCIDTWFKQSH 409
Query: 401 SCPLCKSEIG 410
CP C+ ++
Sbjct: 410 LCPNCRKDLN 419
>gi|397621009|gb|EJK66053.1| hypothetical protein THAOC_13039, partial [Thalassiosira oceanica]
Length = 922
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD--SSSPL 416
SG+D C ICL ++ + DELR L C H H C+D WL N +CP C+ + D SP+
Sbjct: 738 SGDDGCCPICLCEFSNGDELRVLPCGHEMHKTCLDAWLITNPTCPKCRYSMADLVDDSPM 797
Query: 417 VQ 418
Q
Sbjct: 798 TQ 799
>gi|357512351|ref|XP_003626464.1| hypothetical protein MTR_7g116200 [Medicago truncatula]
gi|355501479|gb|AES82682.1| hypothetical protein MTR_7g116200 [Medicago truncatula]
Length = 172
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 360 GEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKS 407
E C +CL ++ D+D +R L +CSH+FH DC+D WL+ N +CPLC+S
Sbjct: 88 SEQETCSVCLTEFKDNDHVRTLPLCSHIFHHDCIDVWLRSNTNCPLCRS 136
>gi|224073019|ref|XP_002303951.1| predicted protein [Populus trichocarpa]
gi|224144358|ref|XP_002336133.1| predicted protein [Populus trichocarpa]
gi|222841383|gb|EEE78930.1| predicted protein [Populus trichocarpa]
gi|222873819|gb|EEF10950.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 353 EKERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
+ R+ + C ICL+ Y+ D +R + C+H FH DC+D WLK+NA+CPLC++
Sbjct: 99 DSRRLPKPNEGPCSICLSDYLPKDTIRCIPYCNHCFHADCIDGWLKMNATCPLCRNSPAP 158
Query: 412 S--SSPLVQDSAQ 422
S S+P+ A+
Sbjct: 159 SKDSTPVATPLAE 171
>gi|194379472|dbj|BAG63702.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F + E +C +
Sbjct: 269 AKPRGLTKADIEQLPSYRFNPDSH---------------------------QSEQTLCVV 301
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 302 CFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 345
>gi|326435222|gb|EGD80792.1| hypothetical protein PTSG_01380 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C +CL ++ ++ +R L C HVFHV+C+D+WL+ +CP C+S I D
Sbjct: 282 ACAVCLQQFEENQHVRRLPCRHVFHVECIDEWLQSVPTCPTCRSNITD 329
>gi|148232126|ref|NP_001091531.1| E3 ubiquitin-protein ligase RNF6 [Bos taurus]
gi|146186811|gb|AAI40556.1| RNF6 protein [Bos taurus]
gi|296481743|tpg|DAA23858.1| TPA: ring finger protein 6 [Bos taurus]
Length = 669
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 615 ACSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQPV 660
>gi|37360244|dbj|BAC98100.1| mKIAA1100 protein [Mus musculus]
Length = 384
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCI 367
++ RG T I LP+Y+F + E +C +
Sbjct: 302 AKPRGLTKADIEQLPSYRFNPDSH---------------------------QSEQTLCVV 334
Query: 368 CLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 335 CFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 378
>gi|413944543|gb|AFW77192.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944544|gb|AFW77193.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 559
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E A C ICL Y +D + +L C+H +H DC+ KWL++ +CP+CK+ D
Sbjct: 503 ESARCVICLEDYKFEDSVGKLKCNHKYHADCIKKWLQVKNACPVCKASAAD 553
>gi|426236501|ref|XP_004012206.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Ovis aries]
Length = 680
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +C++ YV ++LR+L C H FH+ C+D+WL N +CP+C+ +
Sbjct: 626 ACSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSDNCTCPVCRQPV 671
>gi|413948715|gb|AFW81364.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 346
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CLA++ D D LR L C H FH+ CVD+WL+ NASCPLC++ +
Sbjct: 62 CSVCLARFDDADLLRLLPRCRHAFHLHCVDRWLQSNASCPLCRTSV 107
>gi|147820747|emb|CAN71989.1| hypothetical protein VITISV_037727 [Vitis vinifera]
Length = 308
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
+CCIC +Y DDD + L C HV+HV C+ +WL SCP+CK+
Sbjct: 260 ICCICQEEYADDDGVGNLDCGHVYHVACIKEWLAQKNSCPICKN 303
>gi|148222567|ref|NP_001083709.1| ring finger protein 13 precursor [Xenopus laevis]
gi|39645071|gb|AAH63734.1| MGC68556 protein [Xenopus laevis]
Length = 381
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 33/147 (22%)
Query: 266 YRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDYSQTRGAT--AETINALPT 323
Y + + LT Y +PF++ IC L I + +D + R + + LP
Sbjct: 169 YIVLVPDLTLPLEYYLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 324 YKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELIC 383
+KFK G E + VC +CL +Y + D+LR L C
Sbjct: 229 HKFKK----------------------GDEYD--------VCAVCLDEYEEGDKLRILPC 258
Query: 384 SHVFHVDCVDKWL-KINASCPLCKSEI 409
SH +H CVD WL K +CP+CK ++
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>gi|19745198|ref|NP_604462.1| RING finger protein 38 [Rattus norvegicus]
gi|19423292|gb|AAL88459.1|AF480444_1 RING finger protein OIP1 [Rattus norvegicus]
Length = 432
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP Y+F +
Sbjct: 343 LAERLGEAKPRGLTKADIEQLPFYRFNPSNH---------------------------QS 375
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C+ + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASE 426
>gi|255540737|ref|XP_002511433.1| ring finger protein, putative [Ricinus communis]
gi|223550548|gb|EEF52035.1| ring finger protein, putative [Ricinus communis]
Length = 354
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 354 KERMISGEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412
K+ M E C +CL ++ D D LR L +CSH FH+ C+D WL N++CPLC+ + S
Sbjct: 131 KDIMGLKEPFDCAVCLCEFSDRDRLRLLPMCSHAFHIHCIDTWLLSNSTCPLCRGTLLSS 190
Query: 413 SSPL 416
S P+
Sbjct: 191 SLPM 194
>gi|413944541|gb|AFW77190.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944542|gb|AFW77191.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 554
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E A C ICL Y +D + +L C+H +H DC+ KWL++ +CP+CK+ D
Sbjct: 498 ESARCVICLEDYKFEDSVGKLKCNHKYHADCIKKWLQVKNACPVCKASAAD 548
>gi|432108101|gb|ELK33079.1| RING finger protein 165 [Myotis davidii]
Length = 362
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK N
Sbjct: 250 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKRRPQN-------------GK 295
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
G ++E S D C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 296 GKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 354
>gi|357119711|ref|XP_003561578.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
distachyon]
Length = 419
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 365 CCICLAKYVDDDELRELI--CSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413
C +CLA++ DD E L+ C HVFH C+D WL +A+CP+C++++ D +
Sbjct: 166 CAVCLAEFTDDGEKLRLLPGCCHVFHAACIDVWLAAHATCPVCRADLADPA 216
>gi|297723515|ref|NP_001174121.1| Os04g0648800 [Oryza sativa Japonica Group]
gi|255675834|dbj|BAH92849.1| Os04g0648800 [Oryza sativa Japonica Group]
Length = 418
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKS 407
S E+ CCIC +YVD D+L L C H FHV CV +WL + +CP+CK+
Sbjct: 365 SVEEEPCCICQEEYVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPICKN 413
>gi|164660328|ref|XP_001731287.1| hypothetical protein MGL_1470 [Malassezia globosa CBS 7966]
gi|159105187|gb|EDP44073.1| hypothetical protein MGL_1470 [Malassezia globosa CBS 7966]
Length = 814
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSE 408
C +CL + D+DE R L C HVFH CVD+WL+ ++ SCPLC++E
Sbjct: 758 CLVCLDDWQDEDECRILSCKHVFHASCVDQWLEHSSNSCPLCRTE 802
>gi|303277205|ref|XP_003057896.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460553|gb|EEH57847.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 397
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERM------- 357
+D + RG +A + +P +++K +NG G T G E
Sbjct: 275 DDDVKRRGVSAAALARIPVFQWK--ENGEEEATAVEGATAPGPGPGPGPSEDAPAPAPPP 332
Query: 358 ------ISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
+ DA C +CL YV D LR L C H +H DCVD+W + CP+CK ++
Sbjct: 333 AKKAVRVCETDARCAVCLETYVAGDALRRLPCLHAYHKDCVDQWFARSVECPVCKHDV 390
>gi|301772736|ref|XP_002921790.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44-like
[Ailuropoda melanoleuca]
Length = 498
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 409 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 441
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 442 EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASE 492
>gi|297850724|ref|XP_002893243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339085|gb|EFH69502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 426
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 52/128 (40%), Gaps = 30/128 (23%)
Query: 285 ILCATICCCLPCII---SVLGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSG 341
+L A C CI +R SQ G + +NA+P+ F K DN+
Sbjct: 174 LLLAIFCVMAACIFFYRYCTTLRNSTSQFNGMCCKMVNAMPSVTFTYAK------IDNTT 227
Query: 342 GTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL-KINA 400
G C ICL Y+ D+LR L CSH FHV CVD WL
Sbjct: 228 GFS--------------------CAICLEDYIVGDKLRVLPCSHKFHVSCVDSWLISWRT 267
Query: 401 SCPLCKSE 408
CP+CK +
Sbjct: 268 FCPVCKRD 275
>gi|443897553|dbj|GAC74893.1| FOG: Predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 881
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 315 AETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMI---SGEDAVCCICLAK 371
A ++ALPT ++ G+ +D+ V A G K++ +G D +C IC
Sbjct: 755 ASLVDALPTCEYAKWDGGSCAPRDD------AVSAKGKGKQKAAPPPAGRDTMCPICRDD 808
Query: 372 YVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
Y D D L + C H FH C+ W K +CPLC+++ D
Sbjct: 809 YADADVLMSINTCHHAFHAHCIRTWFKTAKTCPLCRADAFD 849
>gi|344240393|gb|EGV96496.1| RING finger protein 44 [Cricetulus griseus]
Length = 351
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 301 LGIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISG 360
L R ++ RG T I LP+Y+F +
Sbjct: 262 LAERLGDAKPRGLTKADIEQLPSYRFNPDSH---------------------------QS 294
Query: 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411
E +C +C + + LR L C+H FH CVDKWLK N +CP+C+++ +
Sbjct: 295 EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 345
>gi|255559032|ref|XP_002520539.1| protein binding protein, putative [Ricinus communis]
gi|223540381|gb|EEF41952.1| protein binding protein, putative [Ricinus communis]
Length = 397
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 305 EDYSQTRGATAETINALPTYKFKSKKNGN-----LNDQDNSGGTEGGVLAAGTEKERMIS 359
++ S + E INALP +K+K ++ N +S TE + +E
Sbjct: 145 DNASAAHSMSEEEINALPVHKYKVPRSENACTSQQQASSSSAPTEMTQDSRKSEGTVKAL 204
Query: 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410
++ C ICL + + +R L C H FH +C+D WL+ +CP+CK IG
Sbjct: 205 EDELTCSICLEQVNKGEIVRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRIG 255
>gi|414885243|tpg|DAA61257.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 407
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 365 CCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEI 409
C +CL+++ D D LR L +C H FHV C+D WL+ +A+CPLC++++
Sbjct: 185 CAVCLSEFADHDRLRLLPLCGHAFHVACIDVWLRSSATCPLCRTKL 230
>gi|301765498|ref|XP_002918178.1| PREDICTED: RING finger protein 165-like [Ailuropoda melanoleuca]
Length = 369
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 302 GIREDYSQ-----------TRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAA 350
+RE Y + TRGA TI T+ K KK QD G E G +
Sbjct: 257 AVRESYEELLQLEDRLGNVTRGAVQNTIERF-TFPHKYKKR---RPQDGKGKKEEGEESD 312
Query: 351 GTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409
EK C ICL+ D +++R L C H+FH CVD+WL ++ CP+C+ +I
Sbjct: 313 TDEK----------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 361
>gi|297738780|emb|CBI28025.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 28/110 (25%)
Query: 302 GIREDYSQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGE 361
G+ S+ G I +LP ++F S K G EG
Sbjct: 126 GLTRSESRFSGIDKTVIESLPFFRFCSLK----------GSKEG---------------- 159
Query: 362 DAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIG 410
C +CL+K+ D + LR L C H FH+DCVD+WL+ ++SCPLC+ ++
Sbjct: 160 -LECAVCLSKFEDIEILRLLPKCKHAFHIDCVDQWLEKHSSCPLCRHKVS 208
>gi|224063957|ref|XP_002301320.1| predicted protein [Populus trichocarpa]
gi|222843046|gb|EEE80593.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 341 GGTEGGVLAA----GTEKERMISGEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKW 395
GG E +LAA E S EDA C ICL +Y + + LR + C H FH+ C+D W
Sbjct: 54 GGLEPVLLAAIPTLRFTHEEFSSAEDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVW 113
Query: 396 LKINASCPLCKSEIGDS 412
L+ ++CP+C+ I DS
Sbjct: 114 LRKQSTCPVCRFPIQDS 130
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,998,847,205
Number of Sequences: 23463169
Number of extensions: 304081186
Number of successful extensions: 1076710
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8451
Number of HSP's successfully gapped in prelim test: 3117
Number of HSP's that attempted gapping in prelim test: 1062430
Number of HSP's gapped (non-prelim): 14016
length of query: 423
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 278
effective length of database: 8,957,035,862
effective search space: 2490055969636
effective search space used: 2490055969636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)