Query 037568
Match_columns 423
No_of_seqs 315 out of 2233
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 23:36:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.7 9E-18 3.1E-22 137.3 7.2 78 308-411 12-89 (91)
2 1x4j_A Ring finger protein 38; 99.7 2E-17 6.7E-22 130.0 4.3 73 314-413 2-74 (75)
3 2ep4_A Ring finger protein 24; 99.6 3.6E-15 1.2E-19 116.5 6.2 55 360-414 13-67 (74)
4 1iym_A EL5; ring-H2 finger, ub 99.5 1.3E-15 4.6E-20 112.1 3.0 50 361-410 4-54 (55)
5 2kiz_A E3 ubiquitin-protein li 99.5 5E-15 1.7E-19 114.1 5.6 54 361-414 13-66 (69)
6 2ect_A Ring finger protein 126 99.5 4.7E-15 1.6E-19 117.0 4.6 56 360-415 13-68 (78)
7 2ecl_A Ring-box protein 2; RNF 99.5 1.1E-14 3.7E-19 116.5 4.1 50 362-411 15-76 (81)
8 2ecm_A Ring finger and CHY zin 99.4 3.3E-14 1.1E-18 104.4 3.7 50 361-410 4-54 (55)
9 1v87_A Deltex protein 2; ring- 99.4 7.6E-14 2.6E-18 117.8 5.3 52 362-413 25-96 (114)
10 3dpl_R Ring-box protein 1; ubi 99.4 8.8E-14 3E-18 117.3 4.5 49 361-409 36-99 (106)
11 2d8s_A Cellular modulator of i 99.4 1.1E-13 3.6E-18 111.0 4.3 53 360-413 13-72 (80)
12 2ea6_A Ring finger protein 4; 99.4 1E-13 3.5E-18 106.0 4.0 52 360-411 13-68 (69)
13 3ng2_A RNF4, snurf, ring finge 99.4 1.1E-13 3.7E-18 106.8 4.0 54 360-413 8-65 (71)
14 2xeu_A Ring finger protein 4; 99.4 1.2E-13 4E-18 104.2 3.7 53 361-413 2-58 (64)
15 2ecn_A Ring finger protein 141 99.3 4.4E-13 1.5E-17 103.4 3.4 50 361-414 14-63 (70)
16 1chc_A Equine herpes virus-1 r 99.3 5.7E-13 2E-17 102.1 3.9 50 361-412 4-53 (68)
17 2d8t_A Dactylidin, ring finger 99.3 6.6E-13 2.3E-17 103.0 3.3 50 360-412 13-62 (71)
18 4a0k_B E3 ubiquitin-protein li 99.3 2.7E-13 9.1E-18 116.2 0.3 50 361-410 47-111 (117)
19 2ct2_A Tripartite motif protei 99.3 2.9E-12 9.9E-17 102.7 4.8 53 360-412 13-69 (88)
20 2djb_A Polycomb group ring fin 99.3 3.8E-12 1.3E-16 99.0 4.8 50 361-413 14-64 (72)
21 2ysl_A Tripartite motif-contai 99.2 6.4E-12 2.2E-16 97.4 4.7 51 360-413 18-71 (73)
22 2yur_A Retinoblastoma-binding 99.2 6.6E-12 2.3E-16 98.3 4.3 52 360-414 13-67 (74)
23 2csy_A Zinc finger protein 183 99.2 7E-12 2.4E-16 99.5 4.1 47 361-410 14-60 (81)
24 2ct0_A Non-SMC element 1 homol 99.2 9.1E-12 3.1E-16 98.3 4.5 54 360-415 13-68 (74)
25 2ecy_A TNF receptor-associated 99.2 8.7E-12 3E-16 95.1 4.0 50 360-412 13-63 (66)
26 4ap4_A E3 ubiquitin ligase RNF 99.2 7.5E-12 2.6E-16 107.1 3.8 54 360-413 5-62 (133)
27 4ayc_A E3 ubiquitin-protein li 99.2 5.7E-12 2E-16 110.3 2.2 47 362-411 53-99 (138)
28 4ap4_A E3 ubiquitin ligase RNF 99.1 2.1E-11 7.3E-16 104.3 3.7 53 360-412 70-126 (133)
29 2ysj_A Tripartite motif-contai 99.1 4.7E-11 1.6E-15 90.1 5.0 43 360-405 18-63 (63)
30 2ecv_A Tripartite motif-contai 99.1 3.8E-11 1.3E-15 95.1 4.4 51 360-413 17-73 (85)
31 2ecw_A Tripartite motif-contai 99.1 4.9E-11 1.7E-15 94.4 5.0 50 360-412 17-72 (85)
32 2egp_A Tripartite motif-contai 99.1 1.5E-11 5.3E-16 96.5 1.3 50 360-412 10-66 (79)
33 3lrq_A E3 ubiquitin-protein li 99.1 1.8E-11 6E-16 101.5 1.4 49 361-412 21-71 (100)
34 1t1h_A Gspef-atpub14, armadill 99.1 5.3E-11 1.8E-15 93.5 3.9 49 361-412 7-56 (78)
35 1g25_A CDK-activating kinase a 99.1 6.2E-11 2.1E-15 90.1 4.0 52 362-413 3-57 (65)
36 2ecj_A Tripartite motif-contai 99.1 4.7E-11 1.6E-15 88.2 2.9 43 360-405 13-58 (58)
37 2y43_A E3 ubiquitin-protein li 99.1 3.3E-11 1.1E-15 99.2 2.1 48 361-411 21-69 (99)
38 2ckl_A Polycomb group ring fin 99.0 7.8E-11 2.7E-15 98.6 3.2 49 361-412 14-63 (108)
39 3fl2_A E3 ubiquitin-protein li 99.0 1E-10 3.5E-15 100.2 2.3 48 361-411 51-99 (124)
40 3ztg_A E3 ubiquitin-protein li 99.0 2.9E-10 1E-14 92.0 4.1 48 360-410 11-61 (92)
41 2ckl_B Ubiquitin ligase protei 98.9 3.2E-10 1.1E-14 101.8 3.7 48 362-411 54-102 (165)
42 1jm7_A BRCA1, breast cancer ty 98.9 3.5E-10 1.2E-14 94.5 3.5 49 362-413 21-72 (112)
43 3l11_A E3 ubiquitin-protein li 98.9 1.3E-10 4.5E-15 98.2 -0.6 48 361-411 14-62 (115)
44 1z6u_A NP95-like ring finger p 98.9 4.6E-10 1.6E-14 99.9 2.5 48 362-412 78-126 (150)
45 3hct_A TNF receptor-associated 98.9 4E-10 1.4E-14 95.8 2.0 49 361-412 17-66 (118)
46 1rmd_A RAG1; V(D)J recombinati 98.9 5.6E-10 1.9E-14 94.4 1.9 49 362-413 23-72 (116)
47 1e4u_A Transcriptional repress 98.8 2E-09 6.9E-14 85.5 4.1 55 360-415 9-66 (78)
48 1bor_A Transcription factor PM 98.8 4.3E-10 1.5E-14 83.4 0.2 48 361-414 5-52 (56)
49 2vje_A E3 ubiquitin-protein li 98.8 1E-09 3.5E-14 83.7 2.2 47 361-410 7-56 (64)
50 1vyx_A ORF K3, K3RING; zinc-bi 98.8 1.9E-09 6.6E-14 81.5 3.4 47 361-410 5-58 (60)
51 2y1n_A E3 ubiquitin-protein li 98.8 2.7E-09 9.3E-14 108.3 3.9 49 361-412 331-380 (389)
52 3k1l_B Fancl; UBC, ring, RWD, 98.7 1.4E-09 4.7E-14 108.2 0.0 52 361-412 307-374 (381)
53 3knv_A TNF receptor-associated 98.7 2.5E-09 8.6E-14 94.2 1.2 49 360-411 29-78 (141)
54 2vje_B MDM4 protein; proto-onc 98.7 4.5E-09 1.5E-13 79.9 2.2 47 362-411 7-56 (63)
55 1wgm_A Ubiquitin conjugation f 98.7 1.7E-08 6E-13 83.4 5.1 50 360-412 20-70 (98)
56 1jm7_B BARD1, BRCA1-associated 98.7 3.1E-09 1E-13 90.2 0.4 48 360-412 20-68 (117)
57 4ic3_A E3 ubiquitin-protein li 98.7 3.1E-09 1.1E-13 83.1 0.4 44 361-411 23-67 (74)
58 2kr4_A Ubiquitin conjugation f 98.7 1.1E-08 3.6E-13 82.4 3.4 50 360-412 12-61 (85)
59 2kre_A Ubiquitin conjugation f 98.6 1.3E-08 4.4E-13 84.5 3.7 50 360-412 27-76 (100)
60 2ecg_A Baculoviral IAP repeat- 98.5 1.7E-08 5.9E-13 79.0 0.7 46 360-412 23-69 (75)
61 3hcs_A TNF receptor-associated 98.5 2.8E-08 9.7E-13 89.3 2.0 49 361-412 17-66 (170)
62 2ea5_A Cell growth regulator w 98.5 6.4E-08 2.2E-12 74.7 3.1 47 359-412 12-59 (68)
63 1wim_A KIAA0161 protein; ring 98.4 7.8E-08 2.7E-12 78.3 2.0 47 362-408 5-61 (94)
64 2yu4_A E3 SUMO-protein ligase 98.4 1.1E-07 3.7E-12 77.8 2.4 45 361-408 6-59 (94)
65 2c2l_A CHIP, carboxy terminus 98.4 1.1E-07 3.8E-12 90.9 2.8 49 360-411 206-255 (281)
66 2yho_A E3 ubiquitin-protein li 98.3 1E-07 3.6E-12 75.6 0.3 44 362-412 18-62 (79)
67 2bay_A PRE-mRNA splicing facto 98.3 2.5E-07 8.4E-12 70.0 2.0 56 363-421 4-60 (61)
68 2f42_A STIP1 homology and U-bo 98.1 7.8E-07 2.7E-11 81.4 2.9 50 360-412 104-154 (179)
69 3t6p_A Baculoviral IAP repeat- 98.1 3.8E-07 1.3E-11 91.5 0.6 45 360-411 293-338 (345)
70 3nw0_A Non-structural maintena 97.8 1.1E-05 3.9E-10 76.8 3.7 54 360-415 178-233 (238)
71 3htk_C E3 SUMO-protein ligase 97.8 6.9E-06 2.4E-10 79.1 2.1 49 361-411 180-232 (267)
72 3vk6_A E3 ubiquitin-protein li 97.6 3E-05 1E-09 63.9 2.8 45 365-411 4-49 (101)
73 2ko5_A Ring finger protein Z; 94.5 0.025 8.5E-07 46.0 3.3 46 364-414 30-76 (99)
74 2lri_C Autoimmune regulator; Z 93.5 0.042 1.4E-06 41.8 2.8 47 361-410 11-61 (66)
75 2jun_A Midline-1; B-BOX, TRIM, 92.9 0.042 1.4E-06 44.4 2.1 36 361-396 2-38 (101)
76 2k16_A Transcription initiatio 81.2 0.33 1.1E-05 37.2 0.2 49 363-412 19-72 (75)
77 2l5u_A Chromodomain-helicase-D 79.5 0.58 2E-05 34.6 1.1 45 361-408 10-58 (61)
78 1f62_A Transcription factor WS 78.2 0.56 1.9E-05 33.2 0.6 44 364-407 2-49 (51)
79 1we9_A PHD finger family prote 78.2 0.51 1.7E-05 35.0 0.4 48 361-408 5-58 (64)
80 3o36_A Transcription intermedi 74.7 0.47 1.6E-05 42.6 -0.8 46 361-409 3-52 (184)
81 1fp0_A KAP-1 corepressor; PHD 73.3 1.2 4E-05 35.7 1.3 47 359-408 22-72 (88)
82 2ysm_A Myeloid/lymphoid or mix 73.2 0.62 2.1E-05 38.4 -0.3 46 361-406 6-55 (111)
83 2yql_A PHD finger protein 21A; 71.9 0.32 1.1E-05 35.3 -2.1 44 361-407 8-55 (56)
84 1wev_A Riken cDNA 1110020M19; 71.4 0.38 1.3E-05 38.4 -2.0 55 361-415 15-79 (88)
85 1xwh_A Autoimmune regulator; P 71.3 0.7 2.4E-05 34.7 -0.4 46 361-409 7-56 (66)
86 1mm2_A MI2-beta; PHD, zinc fin 70.9 0.54 1.8E-05 34.8 -1.1 47 362-411 9-59 (61)
87 1wil_A KIAA1045 protein; ring 70.8 2.1 7.2E-05 34.0 2.2 31 361-395 14-47 (89)
88 1wep_A PHF8; structural genomi 67.0 4.9 0.00017 30.9 3.7 50 364-413 13-68 (79)
89 2puy_A PHD finger protein 21A; 66.6 0.39 1.3E-05 35.3 -2.7 48 361-411 4-55 (60)
90 1wem_A Death associated transc 66.1 1.7 5.8E-05 33.3 0.8 49 364-412 17-74 (76)
91 3lqh_A Histone-lysine N-methyl 65.3 1.7 5.8E-05 39.4 0.8 47 364-410 4-65 (183)
92 2xb1_A Pygopus homolog 2, B-ce 64.5 1.2 4.2E-05 36.6 -0.3 50 363-412 4-65 (105)
93 2ku3_A Bromodomain-containing 64.1 1.6 5.5E-05 33.4 0.3 49 360-408 14-66 (71)
94 1weu_A Inhibitor of growth fam 63.0 3.9 0.00013 32.8 2.4 48 359-409 32-86 (91)
95 2yt5_A Metal-response element- 61.9 2.4 8.1E-05 31.4 0.9 49 360-408 4-61 (66)
96 2e6r_A Jumonji/ARID domain-con 60.8 0.73 2.5E-05 37.0 -2.3 49 360-408 14-66 (92)
97 2kgg_A Histone demethylase jar 60.8 2.1 7.1E-05 30.5 0.4 43 364-406 4-52 (52)
98 2vpb_A Hpygo1, pygopus homolog 58.5 5.2 0.00018 29.9 2.3 33 361-393 7-41 (65)
99 3u5n_A E3 ubiquitin-protein li 58.2 1.2 4E-05 40.9 -1.7 42 362-409 7-55 (207)
100 3v43_A Histone acetyltransfera 57.7 7.2 0.00025 32.0 3.2 45 362-406 5-62 (112)
101 2l43_A N-teminal domain from h 57.7 2.2 7.4E-05 34.0 0.0 52 359-411 22-78 (88)
102 2e6s_A E3 ubiquitin-protein li 51.6 1.6 5.6E-05 33.9 -1.6 44 364-407 28-76 (77)
103 2ri7_A Nucleosome-remodeling f 51.5 4 0.00014 35.9 0.7 46 362-408 8-59 (174)
104 1wen_A Inhibitor of growth fam 51.3 4.5 0.00015 30.8 0.9 39 364-408 17-65 (71)
105 1wee_A PHD finger family prote 50.6 2.2 7.5E-05 32.4 -1.0 48 364-412 18-70 (72)
106 3m62_A Ubiquitin conjugation f 49.6 8 0.00027 43.3 2.9 50 360-412 889-939 (968)
107 3v43_A Histone acetyltransfera 48.8 3.6 0.00012 33.9 -0.1 44 364-407 63-111 (112)
108 2lv9_A Histone-lysine N-methyl 46.8 4.2 0.00014 32.9 0.1 44 364-407 29-75 (98)
109 2ro1_A Transcription intermedi 45.9 2.9 9.9E-05 37.8 -1.1 44 363-409 3-50 (189)
110 1wew_A DNA-binding family prot 45.9 5.8 0.0002 30.5 0.7 47 365-411 18-75 (78)
111 3c6w_A P28ING5, inhibitor of g 44.2 3.8 0.00013 30.0 -0.5 40 362-407 8-57 (59)
112 3ask_A E3 ubiquitin-protein li 43.4 3.4 0.00012 38.7 -1.1 45 364-408 176-225 (226)
113 2cu8_A Cysteine-rich protein 2 42.1 14 0.00047 27.5 2.4 41 362-412 9-49 (76)
114 1iml_A CRIP, cysteine rich int 42.1 9.5 0.00032 28.4 1.4 25 365-391 3-27 (76)
115 3kqi_A GRC5, PHD finger protei 41.3 11 0.00037 28.7 1.6 52 362-413 9-66 (75)
116 2vnf_A ING 4, P29ING4, inhibit 40.8 4.4 0.00015 29.7 -0.6 40 362-407 9-58 (60)
117 2dj7_A Actin-binding LIM prote 38.4 16 0.00055 27.7 2.3 39 362-410 15-53 (80)
118 2lbm_A Transcriptional regulat 36.0 19 0.00065 31.1 2.5 43 362-407 63-116 (142)
119 2co8_A NEDD9 interacting prote 35.6 24 0.00083 26.7 2.9 42 362-413 15-56 (82)
120 3kv5_D JMJC domain-containing 35.4 10 0.00035 39.3 0.8 52 362-413 36-93 (488)
121 2kwj_A Zinc finger protein DPF 34.6 9.1 0.00031 31.5 0.3 43 364-406 3-59 (114)
122 2pk7_A Uncharacterized protein 32.6 11 0.00037 28.7 0.3 20 392-411 1-20 (69)
123 4gne_A Histone-lysine N-methyl 32.1 21 0.00072 29.3 2.1 45 361-411 14-65 (107)
124 2jny_A Uncharacterized BCR; st 30.9 9.4 0.00032 28.9 -0.2 21 392-412 3-23 (67)
125 1x4i_A Inhibitor of growth pro 30.6 3.3 0.00011 31.5 -2.9 46 363-411 6-58 (70)
126 3o70_A PHD finger protein 13; 30.5 6.2 0.00021 29.7 -1.3 43 364-407 21-66 (68)
127 2ysm_A Myeloid/lymphoid or mix 30.4 7.7 0.00026 31.6 -0.9 48 364-411 56-107 (111)
128 3i2d_A E3 SUMO-protein ligase 30.1 28 0.00096 34.8 3.0 46 364-411 251-300 (371)
129 3shb_A E3 ubiquitin-protein li 30.1 5.1 0.00017 31.1 -1.9 26 383-408 47-77 (77)
130 3kv4_A PHD finger protein 8; e 27.8 12 0.00042 38.3 -0.1 50 363-412 5-60 (447)
131 3mjh_B Early endosome antigen 27.2 14 0.00048 24.2 0.2 10 401-410 7-16 (34)
132 4fo9_A E3 SUMO-protein ligase 26.8 35 0.0012 34.0 3.0 46 364-411 217-266 (360)
133 1zbd_B Rabphilin-3A; G protein 26.2 19 0.00065 30.7 0.9 33 361-393 54-88 (134)
134 2d8x_A Protein pinch; LIM doma 25.7 43 0.0015 24.2 2.7 39 363-412 6-44 (70)
135 2jvx_A NF-kappa-B essential mo 24.6 16 0.00056 22.9 0.1 13 399-411 3-15 (28)
136 2kwj_A Zinc finger protein DPF 24.6 4.1 0.00014 33.7 -3.6 47 364-410 60-110 (114)
137 2g6q_A Inhibitor of growth pro 24.6 13 0.00044 27.5 -0.5 40 362-407 10-59 (62)
138 2d8v_A Zinc finger FYVE domain 24.2 27 0.00092 26.4 1.2 30 361-394 7-37 (67)
139 2rsd_A E3 SUMO-protein ligase 23.7 6.7 0.00023 29.3 -2.3 44 363-407 10-64 (68)
140 2d8y_A Eplin protein; LIM doma 23.2 81 0.0028 24.0 4.0 40 363-412 16-55 (91)
141 1a7i_A QCRP2 (LIM1); LIM domai 22.9 24 0.00082 26.5 0.8 40 363-412 8-47 (81)
142 3asl_A E3 ubiquitin-protein li 22.9 11 0.00038 28.4 -1.2 43 364-407 20-68 (70)
143 1wd2_A Ariadne-1 protein homol 22.6 26 0.00089 25.6 0.9 19 395-413 1-20 (60)
144 1x4l_A Skeletal muscle LIM-pro 22.4 52 0.0018 23.8 2.6 41 363-412 6-48 (72)
145 2o35_A Hypothetical protein DU 22.2 33 0.0011 28.0 1.5 12 386-397 42-53 (105)
146 2kpi_A Uncharacterized protein 22.2 9.7 0.00033 27.7 -1.5 20 392-411 3-22 (56)
147 3fyb_A Protein of unknown func 21.9 34 0.0012 27.8 1.5 12 386-397 41-52 (104)
148 1x62_A C-terminal LIM domain p 21.5 47 0.0016 24.7 2.2 39 362-411 15-53 (79)
149 1x61_A Thyroid receptor intera 21.5 65 0.0022 23.2 3.0 39 363-410 6-44 (72)
150 2jr6_A UPF0434 protein NMA0874 21.4 11 0.00038 28.5 -1.4 19 393-411 2-20 (68)
151 1x4k_A Skeletal muscle LIM-pro 20.9 62 0.0021 23.3 2.7 40 364-412 7-46 (72)
152 3ql9_A Transcriptional regulat 20.4 48 0.0017 28.1 2.2 44 362-408 57-111 (129)
153 1x63_A Skeletal muscle LIM-pro 20.2 69 0.0024 23.7 2.9 41 363-412 16-56 (82)
154 1x68_A FHL5 protein; four-and- 20.2 65 0.0022 23.7 2.7 39 364-411 7-47 (76)
155 2cs3_A Protein C14ORF4, MY039 20.1 66 0.0023 25.3 2.7 36 362-398 15-52 (93)
156 2hf1_A Tetraacyldisaccharide-1 20.1 11 0.00039 28.5 -1.6 19 393-411 2-20 (68)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.71 E-value=9e-18 Score=137.33 Aligned_cols=78 Identities=33% Similarity=0.726 Sum_probs=67.1
Q ss_pred cccccccHHHhhcCCcEEecccCCCCCCCCCCCCCCCCCccccCcchhhhcCCCCceeeecccccccCCceEEeccCccc
Q 037568 308 SQTRGATAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVF 387 (423)
Q Consensus 308 ~~~rgas~~~I~~LP~~ky~~~~~~~~~~~~~~~~~~gg~~~~~t~~er~ls~ed~eC~ICL~~y~dge~lr~LPC~H~F 387 (423)
...+|++++.|++||.+++...... .+++.+|+||+++|.+++.++.|||+|.|
T Consensus 12 ~~~~~~s~~~i~~lp~~~~~~~~~~--------------------------~~~~~~C~IC~~~~~~~~~~~~l~C~H~F 65 (91)
T 2l0b_A 12 VANPPASKESIDALPEILVTEDHGA--------------------------VGQEMCCPICCSEYVKGDVATELPCHHYF 65 (91)
T ss_dssp SCCCCCCHHHHHTSCEEECCTTCSS--------------------------SSSCSEETTTTEECCTTCEEEEETTTEEE
T ss_pred cCCCCCCHHHHHhCCCeeecccccc--------------------------cCCCCCCcccChhhcCCCcEEecCCCChH
Confidence 3568999999999999998753211 12356799999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCcccccccCC
Q 037568 388 HVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 388 H~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
|..||++||+.+.+||+||+.+..
T Consensus 66 h~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 66 HKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp EHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred HHHHHHHHHHcCCcCcCcCccCCC
Confidence 999999999999999999999865
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=2e-17 Score=130.02 Aligned_cols=73 Identities=38% Similarity=0.953 Sum_probs=61.4
Q ss_pred cHHHhhcCCcEEecccCCCCCCCCCCCCCCCCCccccCcchhhhcCCCCceeeecccccccCCceEEeccCccccHHHHH
Q 037568 314 TAETINALPTYKFKSKKNGNLNDQDNSGGTEGGVLAAGTEKERMISGEDAVCCICLAKYVDDDELRELICSHVFHVDCVD 393 (423)
Q Consensus 314 s~~~I~~LP~~ky~~~~~~~~~~~~~~~~~~gg~~~~~t~~er~ls~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId 393 (423)
+...|++||.++|+..... .++.+|+||+++|.+++.++.|||+|.||..||+
T Consensus 2 s~~~i~~lp~~~~~~~~~~---------------------------~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~ 54 (75)
T 1x4j_A 2 SSGSSGQLPSYRFNPNNHQ---------------------------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVD 54 (75)
T ss_dssp CCCCCSSCCCEEBCSSSCS---------------------------SSCCEETTTTEECCBTCEEEEETTTEEEETTHHH
T ss_pred cHhhHhhCCcEEecCcccc---------------------------CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHH
Confidence 3456788999999753211 2346799999999999999999999999999999
Q ss_pred HHHhcCCCCcccccccCCCC
Q 037568 394 KWLKINASCPLCKSEIGDSS 413 (423)
Q Consensus 394 ~WL~~~~tCPlCR~~I~~~~ 413 (423)
+||+.+.+||+||+++.+..
T Consensus 55 ~w~~~~~~CP~Cr~~~~~~~ 74 (75)
T 1x4j_A 55 KWLKANRTCPICRADSGPSS 74 (75)
T ss_dssp HHHHHCSSCTTTCCCCCCCC
T ss_pred HHHHcCCcCcCcCCcCCCCC
Confidence 99999999999999998754
No 3
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3.6e-15 Score=116.51 Aligned_cols=55 Identities=33% Similarity=0.808 Sum_probs=49.9
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 414 (423)
.++.+|.||+++|.+++.++.|||+|.||..||++|++.+.+||+||++|.....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQ 67 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCCS
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccccc
Confidence 3456799999999999999999999999999999999999999999999976544
No 4
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.55 E-value=1.3e-15 Score=112.06 Aligned_cols=50 Identities=42% Similarity=0.986 Sum_probs=46.3
Q ss_pred CCceeeecccccccCCceEEec-cCccccHHHHHHHHhcCCCCcccccccC
Q 037568 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LP-C~H~FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
++.+|+||+++|.+++.+..+| |+|.||..||++|++.+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 3567999999999999999998 9999999999999999999999999874
No 5
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.54 E-value=5e-15 Score=114.13 Aligned_cols=54 Identities=37% Similarity=0.930 Sum_probs=49.2
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 414 (423)
++.+|.||++.|..++.++.|||+|.||..||.+|++.+.+||+||..|.....
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 456799999999999999999999999999999999999999999999876543
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.53 E-value=4.7e-15 Score=116.96 Aligned_cols=56 Identities=30% Similarity=0.859 Sum_probs=50.4
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSP 415 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~~ 415 (423)
.++.+|.||++.|.+++.++.|||+|.||..||.+|++.+.+||+||+.+......
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 68 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTA 68 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccC
Confidence 34567999999999999999999999999999999999999999999999776443
No 7
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.1e-14 Score=116.54 Aligned_cols=50 Identities=32% Similarity=0.733 Sum_probs=41.1
Q ss_pred Cceeeecccccc-----------cCCceEEec-cCccccHHHHHHHHhcCCCCcccccccCC
Q 037568 362 DAVCCICLAKYV-----------DDDELRELI-CSHVFHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 362 d~eC~ICL~~y~-----------dge~lr~LP-C~H~FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
+.+|+||+++|+ .++.++.+| |+|.||.+||++||+.+.+||+||+++..
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcch
Confidence 345777777765 456677776 99999999999999999999999998754
No 8
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.45 E-value=3.3e-14 Score=104.41 Aligned_cols=50 Identities=30% Similarity=0.617 Sum_probs=44.0
Q ss_pred CCceeeecccccccC-CceEEeccCccccHHHHHHHHhcCCCCcccccccC
Q 037568 361 EDAVCCICLAKYVDD-DELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~dg-e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
++.+|+||+++|.++ +.++.+||+|.||..||++|++.+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 346799999999765 45788899999999999999999999999999875
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.43 E-value=7.6e-14 Score=117.81 Aligned_cols=52 Identities=31% Similarity=0.618 Sum_probs=43.6
Q ss_pred CceeeecccccccCC---------------ceEEeccCccccHHHHHHHH-----hcCCCCcccccccCCCC
Q 037568 362 DAVCCICLAKYVDDD---------------ELRELICSHVFHVDCVDKWL-----KINASCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~~y~dge---------------~lr~LPC~H~FH~~CId~WL-----~~~~tCPlCR~~I~~~~ 413 (423)
+.+|+|||++|.+++ .++.+||+|.||..||++|| +.+.+||+||+.+....
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~ 96 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKT 96 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCC
Confidence 457999999997754 45578999999999999999 45779999999886553
No 10
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.41 E-value=8.8e-14 Score=117.26 Aligned_cols=49 Identities=33% Similarity=0.709 Sum_probs=42.8
Q ss_pred CCceeeecccccccC---------------CceEEeccCccccHHHHHHHHhcCCCCccccccc
Q 037568 361 EDAVCCICLAKYVDD---------------DELRELICSHVFHVDCVDKWLKINASCPLCKSEI 409 (423)
Q Consensus 361 ed~eC~ICL~~y~dg---------------e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I 409 (423)
++..|+||++.|++. ..++.+||+|.||..||++||+.+.+||+||+++
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcc
Confidence 356799999999865 1367889999999999999999999999999985
No 11
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-13 Score=110.99 Aligned_cols=53 Identities=30% Similarity=0.689 Sum_probs=45.1
Q ss_pred CCCceeeecccccccCCceEEeccC-----ccccHHHHHHHHhcC--CCCcccccccCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICS-----HVFHVDCVDKWLKIN--ASCPLCKSEIGDSS 413 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~-----H~FH~~CId~WL~~~--~tCPlCR~~I~~~~ 413 (423)
.++.+|.|||++|++++.+ .+||+ |.||.+||++||+.+ .+||+||+.+.-..
T Consensus 13 ~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 3456799999999988877 58997 999999999999875 48999999986543
No 12
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1e-13 Score=106.04 Aligned_cols=52 Identities=29% Similarity=0.668 Sum_probs=45.3
Q ss_pred CCCceeeecccccccC----CceEEeccCccccHHHHHHHHhcCCCCcccccccCC
Q 037568 360 GEDAVCCICLAKYVDD----DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dg----e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
.++.+|+||++.|.+. +.+..++|+|.||..||++|++.+.+||+||.+|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 4567799999999874 445788999999999999999999999999998854
No 13
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.40 E-value=1.1e-13 Score=106.78 Aligned_cols=54 Identities=28% Similarity=0.642 Sum_probs=47.2
Q ss_pred CCCceeeecccccccC----CceEEeccCccccHHHHHHHHhcCCCCcccccccCCCC
Q 037568 360 GEDAVCCICLAKYVDD----DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dg----e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 413 (423)
.++.+|+||++.|.+. +.+..++|+|.||..||++|++.+.+||+||..+....
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 65 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCS
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhh
Confidence 3467799999999874 56688899999999999999999999999999998654
No 14
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.40 E-value=1.2e-13 Score=104.21 Aligned_cols=53 Identities=28% Similarity=0.638 Sum_probs=46.4
Q ss_pred CCceeeecccccccC----CceEEeccCccccHHHHHHHHhcCCCCcccccccCCCC
Q 037568 361 EDAVCCICLAKYVDD----DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413 (423)
Q Consensus 361 ed~eC~ICL~~y~dg----e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 413 (423)
++.+|+||++.|.+. +.+..++|+|.||.+||.+|++.+.+||+||.++....
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 58 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTC
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccc
Confidence 456799999999864 55688899999999999999999999999999987653
No 15
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=4.4e-13 Score=103.39 Aligned_cols=50 Identities=32% Similarity=0.925 Sum_probs=44.9
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 414 (423)
++.+|.||++.+.+ ..+||+|.||..||.+|++.+.+||+||+.+.....
T Consensus 14 ~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 14 DEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCC
T ss_pred CCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCc
Confidence 45679999999887 789999999999999999999999999999986544
No 16
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.33 E-value=5.7e-13 Score=102.06 Aligned_cols=50 Identities=32% Similarity=0.754 Sum_probs=43.7
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
++.+|+||++.+.+. ...+||+|.||..||.+|++.+.+||+||..+...
T Consensus 4 ~~~~C~IC~~~~~~~--~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 4 VAERCPICLEDPSNY--SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCSSCCSCCCSC--EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCE
T ss_pred CCCCCeeCCccccCC--cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhh
Confidence 456799999998753 47889999999999999999999999999998653
No 17
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=6.6e-13 Score=102.98 Aligned_cols=50 Identities=34% Similarity=0.622 Sum_probs=44.1
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.++.+|.||++.|.+. ..+||+|.||..||++|++.+.+||+||..|...
T Consensus 13 ~~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVHP---VSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSSE---EEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCCC---EEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 3456799999998775 6789999999999999999999999999998654
No 18
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.29 E-value=2.7e-13 Score=116.24 Aligned_cols=50 Identities=34% Similarity=0.783 Sum_probs=1.0
Q ss_pred CCceeeeccccccc-------------CCc--eEEeccCccccHHHHHHHHhcCCCCcccccccC
Q 037568 361 EDAVCCICLAKYVD-------------DDE--LRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~d-------------ge~--lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
++..|+||+++|++ +++ +..+||+|.||..||++||+.+.+||+||++..
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp CC---------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 45679999999986 333 334589999999999999999999999999853
No 19
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=2.9e-12 Score=102.67 Aligned_cols=53 Identities=25% Similarity=0.599 Sum_probs=46.2
Q ss_pred CCCceeeecccccccCCc-eEEeccCccccHHHHHHHHhcC---CCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDE-LRELICSHVFHVDCVDKWLKIN---ASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~-lr~LPC~H~FH~~CId~WL~~~---~tCPlCR~~I~~~ 412 (423)
.++.+|.||++.|.+++. .+.|||+|.||..||.+|++.+ .+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 345679999999998765 6888999999999999999876 7899999988654
No 20
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=3.8e-12 Score=98.95 Aligned_cols=50 Identities=22% Similarity=0.610 Sum_probs=43.6
Q ss_pred CCceeeecccccccCCceEEe-ccCccccHHHHHHHHhcCCCCcccccccCCCC
Q 037568 361 EDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 413 (423)
++.+|.||++.|.+. ..+ +|+|.||..||.+|++.+.+||+||..+....
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 14 PYILCSICKGYLIDA---TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ 64 (72)
T ss_dssp GGGSCTTTSSCCSSC---EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSC
T ss_pred CCCCCCCCChHHHCc---CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccc
Confidence 456799999999874 455 99999999999999999999999999987654
No 21
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=6.4e-12 Score=97.37 Aligned_cols=51 Identities=27% Similarity=0.643 Sum_probs=43.3
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHh---cCCCCcccccccCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK---INASCPLCKSEIGDSS 413 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~---~~~tCPlCR~~I~~~~ 413 (423)
.++.+|.||++.|.+. ..+||+|.||..||.+|++ .+.+||+||..+....
T Consensus 18 ~~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 18 QEEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCBCTTTCSBCSSE---EECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred ccCCEeccCCcccCCe---EEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 4567899999999864 5679999999999999997 4668999999987653
No 22
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.21 E-value=6.6e-12 Score=98.25 Aligned_cols=52 Identities=19% Similarity=0.511 Sum_probs=43.6
Q ss_pred CCCceeeecccccccCCceEEec-cCccccHHHHHHHHhcC--CCCcccccccCCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKIN--ASCPLCKSEIGDSSS 414 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LP-C~H~FH~~CId~WL~~~--~tCPlCR~~I~~~~~ 414 (423)
.++.+|+||++.|.+. ..|| |+|.||..||.+|++.+ .+||+||+.+.....
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~ 67 (74)
T 2yur_A 13 PDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDA 67 (74)
T ss_dssp CGGGSCSSSCCCCTTC---EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTT
T ss_pred CCCCCCcCCChHHhCC---eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccc
Confidence 3456799999999876 5699 99999999999999876 689999998665443
No 23
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=7e-12 Score=99.54 Aligned_cols=47 Identities=21% Similarity=0.535 Sum_probs=42.4
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
++.+|.||++.|.+. ..+||+|.||..||.+|++.+.+||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNP---VVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSE---EECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCe---eEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 456799999999775 46899999999999999999999999999986
No 24
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=9.1e-12 Score=98.28 Aligned_cols=54 Identities=22% Similarity=0.569 Sum_probs=44.8
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcC--CCCcccccccCCCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN--ASCPLCKSEIGDSSSP 415 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~--~tCPlCR~~I~~~~~~ 415 (423)
....+|+||.+.+..++... .|+|.||..||++||+.+ .+||+||++.......
T Consensus 13 ~~i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~~~ 68 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIPK 68 (74)
T ss_dssp SSSCBCSSSCCBCSSSEECS--SSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCCCC
T ss_pred CCCCcCcchhhHcccCCccC--CCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCCCC
Confidence 34567999999999876444 799999999999999887 8999999988655433
No 25
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=8.7e-12 Score=95.15 Aligned_cols=50 Identities=20% Similarity=0.472 Sum_probs=43.0
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHH-hcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL-KINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL-~~~~tCPlCR~~I~~~ 412 (423)
.++.+|+||++.+.+.. .++|+|.||..||.+|+ +.+.+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~p~---~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPK---QTECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCCEECTTTCCEESSCC---CCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred CcCCCCCCCChHhcCee---ECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 45678999999998773 37999999999999999 5677999999998765
No 26
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.19 E-value=7.5e-12 Score=107.14 Aligned_cols=54 Identities=28% Similarity=0.642 Sum_probs=47.4
Q ss_pred CCCceeeecccccccC----CceEEeccCccccHHHHHHHHhcCCCCcccccccCCCC
Q 037568 360 GEDAVCCICLAKYVDD----DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dg----e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 413 (423)
.++.+|+||++.|.+. +.+..++|+|.||..||++||+.+.+||+||+.+....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 62 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTC
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcccc
Confidence 4567899999999874 56688999999999999999999999999999987654
No 27
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.17 E-value=5.7e-12 Score=110.30 Aligned_cols=47 Identities=30% Similarity=0.916 Sum_probs=42.4
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
+..|+||++.|.+. ..|||+|.||..||.+|++.+.+||+||.+|..
T Consensus 53 ~~~C~iC~~~~~~~---~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSEYFIEA---VTLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HSBCTTTCSBCSSE---EEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred cCCCcccCcccCCc---eECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 45699999999875 678999999999999999999999999999854
No 28
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.12 E-value=2.1e-11 Score=104.27 Aligned_cols=53 Identities=28% Similarity=0.656 Sum_probs=46.1
Q ss_pred CCCceeeecccccccC----CceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDD----DELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dg----e~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
+++.+|+||++.|.+. .....++|+|.||..||++||+.+.+||+||.++.+.
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 4456799999999863 4557889999999999999999999999999998765
No 29
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=4.7e-11 Score=90.10 Aligned_cols=43 Identities=30% Similarity=0.688 Sum_probs=37.6
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHh---cCCCCccc
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK---INASCPLC 405 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~---~~~tCPlC 405 (423)
.++.+|.||++.|.+. ..|||+|.||..||.+|++ .+.+||+|
T Consensus 18 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSC---EECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCe---EEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4567899999999875 6679999999999999998 46689998
No 30
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=3.8e-11 Score=95.08 Aligned_cols=51 Identities=29% Similarity=0.623 Sum_probs=44.1
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhc------CCCCcccccccCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI------NASCPLCKSEIGDSS 413 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~------~~tCPlCR~~I~~~~ 413 (423)
.++.+|.||++.|.+. ..|||+|.||..||.+|++. +..||+||..+....
T Consensus 17 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecv_A 17 KEEVTCPICLELLTQP---LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 73 (85)
T ss_dssp CCCCCCTTTCSCCSSC---BCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSS
T ss_pred cCCCCCCCCCcccCCc---eeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHh
Confidence 3567899999999875 45799999999999999987 789999999988653
No 31
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.11 E-value=4.9e-11 Score=94.45 Aligned_cols=50 Identities=24% Similarity=0.555 Sum_probs=43.8
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhc------CCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI------NASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~------~~tCPlCR~~I~~~ 412 (423)
.++.+|.||++.|.+. ..+||+|.||..||.+|++. +..||+||..+...
T Consensus 17 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecw_A 17 KEEVTCPICLELLKEP---VSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 72 (85)
T ss_dssp CTTTSCTTTCSCCSSC---EECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTT
T ss_pred ccCCCCcCCChhhCcc---eeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHH
Confidence 3467899999999876 47899999999999999987 77899999998765
No 32
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.09 E-value=1.5e-11 Score=96.54 Aligned_cols=50 Identities=28% Similarity=0.554 Sum_probs=43.2
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhc-------CCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-------NASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-------~~tCPlCR~~I~~~ 412 (423)
.++.+|.||++.|.+. ..|||+|.||..||.+|++. +.+||+||..+...
T Consensus 10 ~~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~ 66 (79)
T 2egp_A 10 QEEVTCPICLELLTEP---LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 (79)
T ss_dssp CCCCEETTTTEECSSC---CCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSS
T ss_pred ccCCCCcCCCcccCCe---eECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHh
Confidence 3467899999999876 45799999999999999986 67899999998764
No 33
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.09 E-value=1.8e-11 Score=101.48 Aligned_cols=49 Identities=33% Similarity=0.738 Sum_probs=42.5
Q ss_pred CCceeeecccccccCCceEE-eccCccccHHHHHHHHhcC-CCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELRE-LICSHVFHVDCVDKWLKIN-ASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~-LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 412 (423)
++..|+||++.|.+. .. ++|+|.||..||.+|++.+ .+||+||..+...
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 71 (100)
T 3lrq_A 21 EVFRCFICMEKLRDA---RLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLR 71 (100)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred CCCCCccCCccccCc---cccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHH
Confidence 456799999999864 45 8999999999999999987 6999999998654
No 34
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.08 E-value=5.3e-11 Score=93.53 Aligned_cols=49 Identities=20% Similarity=0.406 Sum_probs=43.2
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhc-CCCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-NASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~ 412 (423)
++..|+||++.|.+. ..+||+|.||..||.+|++. +.+||+||..+...
T Consensus 7 ~~~~C~IC~~~~~~P---v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 7 EYFRCPISLELMKDP---VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHA 56 (78)
T ss_dssp SSSSCTTTSCCCSSE---EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSC
T ss_pred ccCCCCCccccccCC---EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChh
Confidence 456799999999876 56899999999999999987 78999999998754
No 35
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.08 E-value=6.2e-11 Score=90.10 Aligned_cols=52 Identities=27% Similarity=0.551 Sum_probs=42.7
Q ss_pred Cceeeeccc-ccccCCce-EEeccCccccHHHHHHHHhc-CCCCcccccccCCCC
Q 037568 362 DAVCCICLA-KYVDDDEL-RELICSHVFHVDCVDKWLKI-NASCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~-~y~dge~l-r~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 413 (423)
+.+|+||++ .|.+.... ..++|+|.||..||++|+.. +.+||+||..+.+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccccc
Confidence 467999999 78776543 45799999999999999764 467999999997654
No 36
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=4.7e-11 Score=88.23 Aligned_cols=43 Identities=28% Similarity=0.827 Sum_probs=36.8
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHH---hcCCCCccc
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL---KINASCPLC 405 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL---~~~~tCPlC 405 (423)
.++.+|.||++.|.+. ..|||+|.||..||.+|+ +.+.+||+|
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEP---VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSC---CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCcc---EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3467899999999886 458999999999999995 457889998
No 37
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.06 E-value=3.3e-11 Score=99.20 Aligned_cols=48 Identities=25% Similarity=0.613 Sum_probs=42.3
Q ss_pred CCceeeecccccccCCceEEe-ccCccccHHHHHHHHhcCCCCcccccccCC
Q 037568 361 EDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
++.+|.||++.|.+. ..+ ||+|.||..||.+|++.+.+||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIA---MIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCc---CEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 346799999999875 455 899999999999999999999999999875
No 38
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.03 E-value=7.8e-11 Score=98.56 Aligned_cols=49 Identities=22% Similarity=0.754 Sum_probs=42.9
Q ss_pred CCceeeecccccccCCceEEe-ccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
++..|+||++.|.+. ..+ ||+|.||..||.+|++.+.+||+||..+...
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDA---TTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSSE---EEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhCc---CEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 356799999999864 455 9999999999999999999999999998764
No 39
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.99 E-value=1e-10 Score=100.23 Aligned_cols=48 Identities=27% Similarity=0.679 Sum_probs=41.8
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCC-CCcccccccCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~ 411 (423)
++..|+||++.|.+. ..+||+|.||..||.+|++.+. +||+||..+..
T Consensus 51 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRP---ITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCc---EEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 346799999999976 5679999999999999998554 99999999976
No 40
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.97 E-value=2.9e-10 Score=92.04 Aligned_cols=48 Identities=21% Similarity=0.536 Sum_probs=41.6
Q ss_pred CCCceeeecccccccCCceEEec-cCccccHHHHHHHHhcC--CCCcccccccC
Q 037568 360 GEDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKIN--ASCPLCKSEIG 410 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LP-C~H~FH~~CId~WL~~~--~tCPlCR~~I~ 410 (423)
.++..|.||++.|.+. ..|| |+|.|+..||.+|++.+ .+||+||..+.
T Consensus 11 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSSC---EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcCc---eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 3567899999999876 6789 99999999999999754 58999999873
No 41
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.94 E-value=3.2e-10 Score=101.85 Aligned_cols=48 Identities=29% Similarity=0.698 Sum_probs=41.0
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhc-CCCCcccccccCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-NASCPLCKSEIGD 411 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 411 (423)
+..|+||++.|.+. +..+||+|.||..||++|++. +.+||+||..+..
T Consensus 54 ~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 54 ELMCPICLDMLKNT--MTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHBCTTTSSBCSSE--EEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCcccChHhhCc--CEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 45799999999874 334499999999999999987 7889999999853
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.93 E-value=3.5e-10 Score=94.54 Aligned_cols=49 Identities=35% Similarity=0.652 Sum_probs=41.8
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCC---CCcccccccCCCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA---SCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~---tCPlCR~~I~~~~ 413 (423)
+.+|+||++.|.+. ..+||+|.||..||.+|+..+. +||+||..+....
T Consensus 21 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (112)
T 1jm7_A 21 ILECPICLELIKEP---VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (112)
T ss_dssp HTSCSSSCCCCSSC---CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred CCCCcccChhhcCe---EECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhh
Confidence 34699999999876 4479999999999999998754 8999999987654
No 43
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.89 E-value=1.3e-10 Score=98.15 Aligned_cols=48 Identities=23% Similarity=0.683 Sum_probs=41.8
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhc-CCCCcccccccCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-NASCPLCKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 411 (423)
++.+|.||++.|.+. ..|||+|.||..||.+|++. +.+||+||..+..
T Consensus 14 ~~~~C~iC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILVEP---VTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCSSC---EECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccCce---eEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 456799999999876 67799999999999999976 6789999998853
No 44
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.88 E-value=4.6e-10 Score=99.89 Aligned_cols=48 Identities=25% Similarity=0.632 Sum_probs=42.1
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCC-CCcccccccCCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSEIGDS 412 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~~ 412 (423)
+..|+||++.|.+. ..|||+|.||..||.+|++.+. +||+||..+...
T Consensus 78 ~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 78 SFMCVCCQELVYQP---VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CCEeecCChhhcCC---EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 35699999999876 5589999999999999998654 899999999876
No 45
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.88 E-value=4e-10 Score=95.83 Aligned_cols=49 Identities=22% Similarity=0.476 Sum_probs=42.5
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCC-CCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~~ 412 (423)
++..|+||++.|.+. ..+||+|.||..||.+|++.+. +||+||..+...
T Consensus 17 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 17 SKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp GGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCcCChhhcCe---EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 356799999999876 5689999999999999998765 999999998764
No 46
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.85 E-value=5.6e-10 Score=94.41 Aligned_cols=49 Identities=29% Similarity=0.582 Sum_probs=42.5
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhc-CCCCcccccccCCCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-NASCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~~~ 413 (423)
+..|+||++.|.+. ..+||+|.||..||.+|++. +.+||+||..+....
T Consensus 23 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 23 SISCQICEHILADP---VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCcHhcCc---EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 45799999999875 55899999999999999987 789999999987643
No 47
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.82 E-value=2e-09 Score=85.54 Aligned_cols=55 Identities=18% Similarity=0.425 Sum_probs=42.9
Q ss_pred CCCceeeecccccccCCceEEe--ccCccccHHHHHHHHh-cCCCCcccccccCCCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELREL--ICSHVFHVDCVDKWLK-INASCPLCKSEIGDSSSP 415 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~L--PC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~~~~ 415 (423)
.++.+|+||++.+...+ .+.+ +|+|.|+..|+.+|++ .+..||+||+.+.+....
T Consensus 9 ~~~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSC
T ss_pred ccCCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchh
Confidence 35678999999986433 2344 4999999999999984 467899999999876543
No 48
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.82 E-value=4.3e-10 Score=83.39 Aligned_cols=48 Identities=21% Similarity=0.457 Sum_probs=40.5
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 414 (423)
++..|.||++.|.+. +.|||+|.||..||.+| +..||+||+.+.....
T Consensus 5 ~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~~ 52 (56)
T 1bor_A 5 QFLRCQQCQAEAKCP---KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGAD 52 (56)
T ss_dssp CCSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCSS
T ss_pred cCCCceEeCCccCCe---EEcCCCCcccHHHHccC---CCCCCcCCcEeecCCc
Confidence 356799999999876 67899999999999884 6789999999876543
No 49
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.82 E-value=1e-09 Score=83.73 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=40.1
Q ss_pred CCceeeecccccccCCceEEe--ccCcc-ccHHHHHHHHhcCCCCcccccccC
Q 037568 361 EDAVCCICLAKYVDDDELREL--ICSHV-FHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L--PC~H~-FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
++.+|.||++.+.+. ..+ ||+|. |..+|+++|.+.+..||+||++|.
T Consensus 7 ~~~~C~IC~~~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 7 AIEPCVICQGRPKNG---CIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGSCCTTTSSSCSCE---EEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CcCCCCcCCCCCCCE---EEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 345799999987665 444 99999 789999999999999999999885
No 50
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.81 E-value=1.9e-09 Score=81.46 Aligned_cols=47 Identities=30% Similarity=0.712 Sum_probs=37.3
Q ss_pred CCceeeecccccccCCceEEeccC--c---cccHHHHHHHHhc--CCCCcccccccC
Q 037568 361 EDAVCCICLAKYVDDDELRELICS--H---VFHVDCVDKWLKI--NASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~--H---~FH~~CId~WL~~--~~tCPlCR~~I~ 410 (423)
+..+|.||+++. ++++ .+||+ | .||..|+++|++. +.+||+||+.+.
T Consensus 5 ~~~~CrIC~~~~--~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 5 DVPVCWICNEEL--GNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEEC--SCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCEeEEeecCC--CCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 346799999983 4445 58964 4 9999999999964 678999998763
No 51
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.76 E-value=2.7e-09 Score=108.28 Aligned_cols=49 Identities=27% Similarity=0.693 Sum_probs=42.9
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHh-cCCCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-INASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~-~~~tCPlCR~~I~~~ 412 (423)
...+|+||++.+.+. ..+||+|.||..||..|++ .+.+||+||..+...
T Consensus 331 ~~~~C~ICle~~~~p---v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 331 TFQLCKICAENDKDV---KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSSBCTTTSSSBCCE---EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEE
T ss_pred CCCCCCccCcCCCCe---EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCc
Confidence 346899999998664 7899999999999999998 788999999998764
No 52
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.72 E-value=1.4e-09 Score=108.17 Aligned_cols=52 Identities=33% Similarity=0.795 Sum_probs=41.6
Q ss_pred CCceeeecccccccCCceE-----EeccCccccHHHHHHHHhcC-----------CCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELR-----ELICSHVFHVDCVDKWLKIN-----------ASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr-----~LPC~H~FH~~CId~WL~~~-----------~tCPlCR~~I~~~ 412 (423)
+..+|+||++.+.++.++- ..+|+|.||..||.+||+.. .+||+||++|.-+
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~s 374 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTS 374 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCcc
Confidence 4567999999999854432 34699999999999999752 5799999988644
No 53
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.70 E-value=2.5e-09 Score=94.16 Aligned_cols=49 Identities=18% Similarity=0.350 Sum_probs=42.3
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCC-CCcccccccCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA-SCPLCKSEIGD 411 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~-tCPlCR~~I~~ 411 (423)
.++..|.||++.|.+. ..++|+|.||..||.+|++.+. +||+||.++..
T Consensus 29 ~~~~~C~IC~~~~~~p---v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 29 EAKYLCSACRNVLRRP---FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred CcCcCCCCCChhhcCc---EECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 4567899999999887 5689999999999999998664 89999998743
No 54
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.69 E-value=4.5e-09 Score=79.90 Aligned_cols=47 Identities=30% Similarity=0.564 Sum_probs=39.9
Q ss_pred CceeeecccccccCCceEEe--ccCcc-ccHHHHHHHHhcCCCCcccccccCC
Q 037568 362 DAVCCICLAKYVDDDELREL--ICSHV-FHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~L--PC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
+.+|.||++...+. ..+ ||+|. |..+|+.+|.+.+..||+||++|..
T Consensus 7 ~~~C~IC~~~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~ 56 (63)
T 2vje_B 7 LKPCSLCEKRPRDG---NIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQL 56 (63)
T ss_dssp GSBCTTTSSSBSCE---EEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCE
T ss_pred CCCCcccCCcCCCe---EEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhc
Confidence 35699999986654 345 99998 9999999999989999999999853
No 55
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.66 E-value=1.7e-08 Score=83.45 Aligned_cols=50 Identities=14% Similarity=0.087 Sum_probs=45.0
Q ss_pred CCCceeeecccccccCCceEEeccC-ccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICS-HVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.++..|+||++-|.|. ..+||+ |.|...||.+||+.+.+||+||..+...
T Consensus 20 p~~~~CpI~~~~m~dP---V~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~ 70 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMD 70 (98)
T ss_dssp CTTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTT
T ss_pred cHhcCCcCccccccCC---eECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChh
Confidence 4567899999999998 678999 9999999999999899999999988654
No 56
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.66 E-value=3.1e-09 Score=90.21 Aligned_cols=48 Identities=23% Similarity=0.507 Sum_probs=41.3
Q ss_pred CCCceeeecccccccCCceEEe-ccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.++..|+||++.|.+. ..+ ||+|.||..||.+|++ ..||+||..+...
T Consensus 20 ~~~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~ 68 (117)
T 1jm7_B 20 EKLLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQ 68 (117)
T ss_dssp HHTTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCS
T ss_pred hhCCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCccc
Confidence 3467799999999876 566 9999999999999998 8899999998543
No 57
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.66 E-value=3.1e-09 Score=83.14 Aligned_cols=44 Identities=25% Similarity=0.635 Sum_probs=38.3
Q ss_pred CCceeeecccccccCCceEEeccCcc-ccHHHHHHHHhcCCCCcccccccCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHV-FHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
++.+|.||++.+.+. ..|||+|. |+..|+.+| .+||+||..|..
T Consensus 23 ~~~~C~iC~~~~~~~---~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIAI---VFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCCE---EEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCCE---EEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 456799999987664 67899999 999999999 899999998864
No 58
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.65 E-value=1.1e-08 Score=82.42 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=44.5
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.++..|+||++-|.+. ..+||||.|...||.+|++.+.+||+||..+...
T Consensus 12 p~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~ 61 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDP---VRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTES 61 (85)
T ss_dssp CTTTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred chheECcccCchhcCC---eECCCCCEECHHHHHHHHhcCCCCCCCcCCCChH
Confidence 3567899999999998 6789999999999999999899999999987643
No 59
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.64 E-value=1.3e-08 Score=84.55 Aligned_cols=50 Identities=10% Similarity=0.087 Sum_probs=45.1
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.++..|+||++-|.+. ..+||||.|...||.+||..+.+||+||.++...
T Consensus 27 p~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~ 76 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDP---VRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTES 76 (100)
T ss_dssp STTTBCTTTCSBCSSE---EEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTT
T ss_pred cHhhCCcCccCcccCC---eECCCCCEEchHHHHHHHHcCCCCCCCCCCCChh
Confidence 4567899999999998 6789999999999999999899999999988653
No 60
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=1.7e-08 Score=78.97 Aligned_cols=46 Identities=24% Similarity=0.604 Sum_probs=37.9
Q ss_pred CCCceeeecccccccCCceEEeccCcc-ccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHV-FHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.++.+|.||++.+.+. ..+||+|. |+..|+.+ ...||+||.+|...
T Consensus 23 ~~~~~C~IC~~~~~~~---~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~~ 69 (75)
T 2ecg_A 23 QEEKLCKICMDRNIAI---VFVPCGHLVTCKQCAEA----VDKCPMCYTVITFK 69 (75)
T ss_dssp HHHHSCSSSCSSCCCB---CCSSSCCCCBCHHHHHH----CSBCTTTCCBCCCC
T ss_pred CCCCCCCcCCCCCCCE---EEecCCCHHHHHHHhhC----CCCCccCCceecCc
Confidence 3456799999998765 56899999 99999965 47899999998653
No 61
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.49 E-value=2.8e-08 Score=89.35 Aligned_cols=49 Identities=22% Similarity=0.468 Sum_probs=42.3
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcC-CCCcccccccCCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN-ASCPLCKSEIGDS 412 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 412 (423)
++..|+||++.|.+. ..++|+|.|+..||.+|++.+ .+||+||..+...
T Consensus 17 ~~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 17 SKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (170)
T ss_dssp GGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCChhhcCc---EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchh
Confidence 456799999999876 568999999999999999764 4999999998764
No 62
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=6.4e-08 Score=74.67 Aligned_cols=47 Identities=26% Similarity=0.603 Sum_probs=38.9
Q ss_pred CCCCceeeecccccccCCceEEeccCcc-ccHHHHHHHHhcCCCCcccccccCCC
Q 037568 359 SGEDAVCCICLAKYVDDDELRELICSHV-FHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 359 s~ed~eC~ICL~~y~dge~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
..++.+|.||++...+ +..|||+|. |+..|+.. ...||+||..|...
T Consensus 12 ~~~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 12 EENSKDCVVCQNGTVN---WVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQES 59 (68)
T ss_dssp CCCSSCCSSSSSSCCC---CEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCE
T ss_pred CCCCCCCCCcCcCCCC---EEEECCCChhhhHHHHhc----CCCCCCCCcchhce
Confidence 3456789999998655 478899999 99999984 57899999998764
No 63
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.39 E-value=7.8e-08 Score=78.32 Aligned_cols=47 Identities=23% Similarity=0.665 Sum_probs=39.5
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhc--------CCCCcc--cccc
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI--------NASCPL--CKSE 408 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~--------~~tCPl--CR~~ 408 (423)
..+|.||+++|.+.+.++.++|+|.|+.+|+..+++. ...||. |+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 4579999999988766666689999999999999963 247999 9987
No 64
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=1.1e-07 Score=77.77 Aligned_cols=45 Identities=20% Similarity=0.456 Sum_probs=38.7
Q ss_pred CCceeeecccccccCCceEEec-cCccccHHHHHHHHhcC------CCCcc--cccc
Q 037568 361 EDAVCCICLAKYVDDDELRELI-CSHVFHVDCVDKWLKIN------ASCPL--CKSE 408 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LP-C~H~FH~~CId~WL~~~------~tCPl--CR~~ 408 (423)
++..|+||++-|.+. ..+| |+|.|...||.+||..+ .+||+ |+..
T Consensus 6 ~~~~CPI~~~~~~dP---V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKP---VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSE---EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCC---EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 456799999999987 6786 99999999999999764 48999 9865
No 65
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.37 E-value=1.1e-07 Score=90.85 Aligned_cols=49 Identities=8% Similarity=0.030 Sum_probs=42.4
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcC-CCCcccccccCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN-ASCPLCKSEIGD 411 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~ 411 (423)
.++..|+||++-|.+. ..+||+|.|+..||.+|+..+ .+||+||.++..
T Consensus 206 ~~~~~c~i~~~~~~dP---v~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 206 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp CSTTBCTTTCSBCSSE---EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred CcccCCcCcCCHhcCC---eECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 3466799999999988 678999999999999999864 459999998854
No 66
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.29 E-value=1e-07 Score=75.60 Aligned_cols=44 Identities=23% Similarity=0.651 Sum_probs=37.1
Q ss_pred CceeeecccccccCCceEEeccCcc-ccHHHHHHHHhcCCCCcccccccCCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHV-FHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
+.+|.||++.+.+ ...+||+|. |+..|+.+| ..||+||..|...
T Consensus 18 ~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 18 AMLCMVCCEEEIN---STFCPCGHTVCCESCAAQL----QSCPVCRSRVEHV 62 (79)
T ss_dssp HTBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC----SBCTTTCCBCCEE
T ss_pred CCEeEEeCcccCc---EEEECCCCHHHHHHHHHhc----CcCCCCCchhhCe
Confidence 4579999998765 478899999 999999987 4999999988653
No 67
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.27 E-value=2.5e-07 Score=69.98 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=45.9
Q ss_pred ceeeecccccccCCceEEe-ccCccccHHHHHHHHhcCCCCcccccccCCCCCCCCCCCC
Q 037568 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKINASCPLCKSEIGDSSSPLVQDSA 421 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~~~~~~~~ 421 (423)
..|+||++-++|. ..+ +|+|.|-+.||.+||+.+.+||+++.++....-...+..+
T Consensus 4 ~~CpIs~~~m~dP---V~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Lip~~~~~ 60 (61)
T 2bay_A 4 MLCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSA 60 (61)
T ss_dssp CCCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCEECCCC-
T ss_pred EEecCCCCCCCCC---EEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcEECccCC
Confidence 3599999999976 566 8999999999999999889999999998766554444433
No 68
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.14 E-value=7.8e-07 Score=81.35 Aligned_cols=50 Identities=8% Similarity=0.023 Sum_probs=42.6
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcC-CCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN-ASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~-~tCPlCR~~I~~~ 412 (423)
.+...|+||++-|.+. ..+||||.|...||.+|+..+ .+||+|+.++...
T Consensus 104 p~~f~CPI~~elm~DP---V~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~ 154 (179)
T 2f42_A 104 PDYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQD 154 (179)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred cHhhcccCccccCCCC---eECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChh
Confidence 3557799999999987 677999999999999999864 4799999987543
No 69
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.13 E-value=3.8e-07 Score=91.49 Aligned_cols=45 Identities=27% Similarity=0.686 Sum_probs=39.2
Q ss_pred CCCceeeecccccccCCceEEeccCcc-ccHHHHHHHHhcCCCCcccccccCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHV-FHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~-FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
.++..|.||++.+.+. ..|||+|. |+..|+.+| ..||+||..|..
T Consensus 293 ~~~~~C~IC~~~~~~~---v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSV---VFIPCGHLVVCQECAPSL----RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBCCE---EEETTCCEEECTTTGGGC----SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCCce---EEcCCCChhHhHHHHhcC----CcCCCCCCCccC
Confidence 4567899999998764 67899999 999999998 789999998864
No 70
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.77 E-value=1.1e-05 Score=76.81 Aligned_cols=54 Identities=24% Similarity=0.582 Sum_probs=43.1
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhcCC--CCcccccccCCCCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINA--SCPLCKSEIGDSSSP 415 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~--tCPlCR~~I~~~~~~ 415 (423)
+...+|.||.+-...|.... .|+|.||..|+++|++.+. +||.|+.........
T Consensus 178 ~~i~~C~iC~~iv~~g~~C~--~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~~~~ 233 (238)
T 3nw0_A 178 DAVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIPK 233 (238)
T ss_dssp TTCCBCTTTCSBCSSCEECS--SSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSCCCC
T ss_pred CCCCcCcchhhHHhCCcccC--ccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Confidence 34678999999998874333 2999999999999998654 899999987666433
No 71
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.77 E-value=6.9e-06 Score=79.06 Aligned_cols=49 Identities=27% Similarity=0.523 Sum_probs=40.8
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcC--CCCcc--cccccCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN--ASCPL--CKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~--~tCPl--CR~~I~~ 411 (423)
.+..|+||++-|.+. |+.+.|||.|.+.||.+|++.+ .+||+ |+..+..
T Consensus 180 ~el~CPIcl~~f~DP--Vts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 180 IELTCPITCKPYEAP--LISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp CCSBCTTTSSBCSSE--EEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred eeeECcCccCcccCC--eeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 456799999999776 4445899999999999999764 47999 9997754
No 72
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.57 E-value=3e-05 Score=63.92 Aligned_cols=45 Identities=29% Similarity=0.475 Sum_probs=36.3
Q ss_pred eeecccccccCCceEEeccCccccHHHHHHHHhc-CCCCcccccccCC
Q 037568 365 CCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-NASCPLCKSEIGD 411 (423)
Q Consensus 365 C~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-~~tCPlCR~~I~~ 411 (423)
|.+|--.+.. ..|.+||+|.|+.+|+..|.+. ..+||.|+.+|..
T Consensus 4 C~~C~~Pi~i--ygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 4 CDKCGLPIKV--YGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQR 49 (101)
T ss_dssp CTTTCSBCSE--EEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSE
T ss_pred cCccCCCeEE--EeeeccccccHHHHHHHHHHhccCCCCcCcCCeeee
Confidence 6666555443 4699999999999999999965 6889999998864
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=94.46 E-value=0.025 Score=45.95 Aligned_cols=46 Identities=22% Similarity=0.600 Sum_probs=37.4
Q ss_pred eeeecccccccCCceEEecc-CccccHHHHHHHHhcCCCCcccccccCCCCC
Q 037568 364 VCCICLAKYVDDDELRELIC-SHVFHVDCVDKWLKINASCPLCKSEIGDSSS 414 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC-~H~FH~~CId~WL~~~~tCPlCR~~I~~~~~ 414 (423)
-|-.|.-+.. ..+.| .|+++..|+..-|.+...||+|+.++...-.
T Consensus 30 nCKsCWf~~k-----~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~ 76 (99)
T 2ko5_A 30 FCKSCWFENK-----GLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLR 76 (99)
T ss_dssp CCCSSCSCCS-----SEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSC
T ss_pred cChhhccccC-----CeeeecchhhHHHHHHHHHhhccCCcccCCcCCccee
Confidence 4999987644 24557 5999999999999999999999998866543
No 74
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=93.49 E-value=0.042 Score=41.82 Aligned_cols=47 Identities=26% Similarity=0.464 Sum_probs=33.1
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcC----CCCcccccccC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN----ASCPLCKSEIG 410 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~----~tCPlCR~~I~ 410 (423)
.+.+|.||-+ .++.|.-=-|...||..|++..|... =.||.|+....
T Consensus 11 ~~~~C~vC~~---~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~ 61 (66)
T 2lri_C 11 PGARCGVCGD---GTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVT 61 (66)
T ss_dssp TTCCCTTTSC---CTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCC
T ss_pred CCCCcCCCCC---CCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCCc
Confidence 4567999974 24322222488999999999998653 26999987543
No 75
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=92.86 E-value=0.042 Score=44.40 Aligned_cols=36 Identities=17% Similarity=0.398 Sum_probs=29.1
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHH-HH
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDK-WL 396 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~-WL 396 (423)
++..|.||+++|.......-++|+|.|...|+.. |-
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 4567999999876555556699999999999998 54
No 76
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=81.24 E-value=0.33 Score=37.24 Aligned_cols=49 Identities=20% Similarity=0.364 Sum_probs=32.9
Q ss_pred ceeeecccccccCCceEEe-ccCccccHHHHHHHHhc----CCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKI----NASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~----~~tCPlCR~~I~~~ 412 (423)
..|.||-..+. ++.+..= -|.--||..|+..-+.. .-.||.|+..+.+.
T Consensus 19 ~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~ 72 (75)
T 2k16_A 19 WICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKD 72 (75)
T ss_dssp ECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSC
T ss_pred cCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchhhc
Confidence 45889987753 3322221 38899999999865532 34699998877544
No 77
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=79.50 E-value=0.58 Score=34.64 Aligned_cols=45 Identities=24% Similarity=0.613 Sum_probs=30.5
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccccc
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSE 408 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~ 408 (423)
++..|.||-.. ++.+.---|.-.||..|++.=|.. .=.||.|++.
T Consensus 10 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 45679999863 432222247899999999986643 2359999753
No 78
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=78.24 E-value=0.56 Score=33.15 Aligned_cols=44 Identities=30% Similarity=0.563 Sum_probs=28.8
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCccccc
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKS 407 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~ 407 (423)
.|.||...-..++.+.---|...||..|++.=|.. .=.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 48899876443333332248899999999764433 224999965
No 79
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=78.16 E-value=0.51 Score=35.01 Aligned_cols=48 Identities=25% Similarity=0.516 Sum_probs=33.4
Q ss_pred CCceeeecccccccCCceEEe-ccCccccHHHHHHHHh-----cCCCCcccccc
Q 037568 361 EDAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLK-----INASCPLCKSE 408 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~~ 408 (423)
++..|.||...|.+++.+..= -|..=||..|+.---. ..-.||.|+..
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 345699999998765443332 4889999999865432 24569999764
No 80
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=74.74 E-value=0.47 Score=42.63 Aligned_cols=46 Identities=24% Similarity=0.496 Sum_probs=31.7
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcC----CCCccccccc
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN----ASCPLCKSEI 409 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~----~tCPlCR~~I 409 (423)
++..|.+|-.. |+.+--=-|.-.||..|++.-|... =.||.|+..-
T Consensus 3 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 45669999843 4422222378999999998877542 3599998754
No 81
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=73.30 E-value=1.2 Score=35.74 Aligned_cols=47 Identities=28% Similarity=0.528 Sum_probs=32.2
Q ss_pred CCCCceeeecccccccCCceEEeccCccccHHHHHHHHhcC----CCCcccccc
Q 037568 359 SGEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN----ASCPLCKSE 408 (423)
Q Consensus 359 s~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~----~tCPlCR~~ 408 (423)
..++..|.+|... ++.+.---|.-.||..|+++=|..- -.||.|+..
T Consensus 22 d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 3456679999964 4433322478899999998766442 359999864
No 82
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=73.24 E-value=0.62 Score=38.39 Aligned_cols=46 Identities=26% Similarity=0.468 Sum_probs=30.1
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccc
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCK 406 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR 406 (423)
++..|.||.+.=+..+.+.--.|...||..|++..+.. .-.||-|+
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 46679999886332222333358899999999987742 23466554
No 83
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.87 E-value=0.32 Score=35.34 Aligned_cols=44 Identities=34% Similarity=0.727 Sum_probs=29.8
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhcC----CCCccccc
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKIN----ASCPLCKS 407 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~----~tCPlCR~ 407 (423)
++..|.||-.. ++.+.---|...||..|++.=|... =.||.|+.
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 45669999874 4333322488999999999765432 24998864
No 84
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=71.37 E-value=0.38 Score=38.38 Aligned_cols=55 Identities=16% Similarity=0.362 Sum_probs=36.5
Q ss_pred CCceeeecccccccCCceEEe--ccCccccHHHHHHHHhc--------CCCCcccccccCCCCCC
Q 037568 361 EDAVCCICLAKYVDDDELREL--ICSHVFHVDCVDKWLKI--------NASCPLCKSEIGDSSSP 415 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L--PC~H~FH~~CId~WL~~--------~~tCPlCR~~I~~~~~~ 415 (423)
++..|.||...-..++....+ -|...||..|++.=|.. .=.||.|+....+....
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~~~~ 79 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQK 79 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCSTTC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhhccc
Confidence 456799999864432222233 38999999999876641 23699998776555443
No 85
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=71.29 E-value=0.7 Score=34.69 Aligned_cols=46 Identities=20% Similarity=0.496 Sum_probs=31.0
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCccccccc
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSEI 409 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~I 409 (423)
++..|.||-.. ++.+.-=-|.-.||..|++.=|.. .=.||.|+..-
T Consensus 7 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 7 NEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTC
T ss_pred CCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCcc
Confidence 45679999863 433322248899999999865543 22599997643
No 86
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=70.86 E-value=0.54 Score=34.84 Aligned_cols=47 Identities=21% Similarity=0.479 Sum_probs=31.3
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccccccCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSEIGD 411 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 411 (423)
+..|.||-. .++.+.-=-|...||..|++.=|.. .=.||.|+....+
T Consensus 9 ~~~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~k 59 (61)
T 1mm2_A 9 MEFCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 59 (61)
T ss_dssp CSSCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCT
T ss_pred CCcCCCCCC---CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchhc
Confidence 456999975 2432222247899999999865543 2359999876544
No 87
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=70.76 E-value=2.1 Score=34.02 Aligned_cols=31 Identities=26% Similarity=0.764 Sum_probs=23.2
Q ss_pred CCceeeecccccccCCceEEec---cCccccHHHHHHH
Q 037568 361 EDAVCCICLAKYVDDDELRELI---CSHVFHVDCVDKW 395 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LP---C~H~FH~~CId~W 395 (423)
.|..|.||- -|..++ .+| |+-.||..|+.+-
T Consensus 14 ~D~~C~VC~-~~t~~~---l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 14 NDEMCDVCE-VWTAES---LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CSCCCTTTC-CCCSSC---CSSCSSSSSCCCHHHHHHH
T ss_pred CCcccCccc-cccccc---eeccccccccccHhhcccc
Confidence 577899985 344443 455 6899999999995
No 88
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=66.99 E-value=4.9 Score=30.94 Aligned_cols=50 Identities=30% Similarity=0.563 Sum_probs=32.6
Q ss_pred eeeecccccccCCceEEe-ccCccccHHHHHHHHh-----cCCCCcccccccCCCC
Q 037568 364 VCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLK-----INASCPLCKSEIGDSS 413 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~~I~~~~ 413 (423)
..|||-..+.++..+..= -|..=||..|+.-=-. ..-.||.|+..-.+..
T Consensus 13 ~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~ 68 (79)
T 1wep_A 13 VYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGPSI 68 (79)
T ss_dssp CCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCSCB
T ss_pred cEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCCCc
Confidence 355999988644433222 4889999999853221 2456999988755443
No 89
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=66.59 E-value=0.39 Score=35.34 Aligned_cols=48 Identities=31% Similarity=0.673 Sum_probs=32.4
Q ss_pred CCceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccccccCC
Q 037568 361 EDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 411 (423)
++..|.||-.. ++.+.-=-|.-.||..|++.=|.. .=.||.|+....+
T Consensus 4 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~~ 55 (60)
T 2puy_A 4 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLK 55 (60)
T ss_dssp CCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHHH
T ss_pred CCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChhhc
Confidence 34569999874 433332348899999999975543 2359999776544
No 90
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=66.12 E-value=1.7 Score=33.32 Aligned_cols=49 Identities=29% Similarity=0.423 Sum_probs=31.7
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHH---------hcCCCCcccccccCCC
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWL---------KINASCPLCKSEIGDS 412 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL---------~~~~tCPlCR~~I~~~ 412 (423)
.-|||-..+.++.-|.---|..=||..|+.--. ...-.||.|+..-.+.
T Consensus 17 ~~C~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p~ 74 (76)
T 1wem_A 17 LYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGPS 74 (76)
T ss_dssp CCSTTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCSS
T ss_pred CEEECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCcC
Confidence 345999887644323222488999999985321 2467899998754443
No 91
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=65.34 E-value=1.7 Score=39.36 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=33.3
Q ss_pred eeeecccccccCCc---eEEe-ccCccccHHHHHHH------Hh-----cCCCCcccccccC
Q 037568 364 VCCICLAKYVDDDE---LREL-ICSHVFHVDCVDKW------LK-----INASCPLCKSEIG 410 (423)
Q Consensus 364 eC~ICL~~y~dge~---lr~L-PC~H~FH~~CId~W------L~-----~~~tCPlCR~~I~ 410 (423)
.|.||...|.+++. +..= -|..=||..|+.-= ++ ..-.||.|+..-.
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 49999999998873 3222 38999999997421 11 1568999987543
No 92
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=64.52 E-value=1.2 Score=36.60 Aligned_cols=50 Identities=24% Similarity=0.399 Sum_probs=34.9
Q ss_pred ceeeecccccccCCceEEe--ccCccccHHHHHHHH----h------cCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELREL--ICSHVFHVDCVDKWL----K------INASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~L--PC~H~FH~~CId~WL----~------~~~tCPlCR~~I~~~ 412 (423)
..|.||...|.++.....= -|.-=||..|+.-=- + ..-.||.|+..-..+
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~ 65 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGS 65 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCC
Confidence 4599999999776654443 478999999975321 0 345699998765444
No 93
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=64.08 E-value=1.6 Score=33.37 Aligned_cols=49 Identities=24% Similarity=0.466 Sum_probs=30.3
Q ss_pred CCCceeeecccccc-cCCceEEe-ccCccccHHHHHHHHh--cCCCCcccccc
Q 037568 360 GEDAVCCICLAKYV-DDDELREL-ICSHVFHVDCVDKWLK--INASCPLCKSE 408 (423)
Q Consensus 360 ~ed~eC~ICL~~y~-dge~lr~L-PC~H~FH~~CId~WL~--~~~tCPlCR~~ 408 (423)
.++..|.||...-. +++++..= -|.-.||..|+..=.. ..=.||.|+..
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 34567999987642 22222221 4889999999875321 12359988753
No 94
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=62.97 E-value=3.9 Score=32.84 Aligned_cols=48 Identities=27% Similarity=0.569 Sum_probs=28.5
Q ss_pred CCCCceeeecccccccCCceEEec--cC-ccccHHHHHHHHhc----CCCCccccccc
Q 037568 359 SGEDAVCCICLAKYVDDDELRELI--CS-HVFHVDCVDKWLKI----NASCPLCKSEI 409 (423)
Q Consensus 359 s~ed~eC~ICL~~y~dge~lr~LP--C~-H~FH~~CId~WL~~----~~tCPlCR~~I 409 (423)
..++...|||-..+. ++.|.-=- |. .-||..||. |.. +-.||.|+..-
T Consensus 32 d~~e~~yCiC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 32 DPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CSCCCBCSTTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCCCCcEEECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 334445559988653 43221112 44 579999997 433 34599997654
No 95
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=61.93 E-value=2.4 Score=31.42 Aligned_cols=49 Identities=22% Similarity=0.519 Sum_probs=32.2
Q ss_pred CCCceeeecccccccCCceEEe--ccCccccHHHHHHHHh-------cCCCCcccccc
Q 037568 360 GEDAVCCICLAKYVDDDELREL--ICSHVFHVDCVDKWLK-------INASCPLCKSE 408 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~L--PC~H~FH~~CId~WL~-------~~~tCPlCR~~ 408 (423)
+++..|.||.......+....+ -|.-.||..|++.=|. ..=.||.|+..
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 3456799999876442222222 4889999999886442 12359999754
No 96
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.81 E-value=0.73 Score=37.05 Aligned_cols=49 Identities=24% Similarity=0.363 Sum_probs=31.9
Q ss_pred CCCceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccccc
Q 037568 360 GEDAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSE 408 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~ 408 (423)
.++..|.||...-..++.|.-=-|...||..|++.=|.. .=.||.|+..
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 456679999987543322222248899999999854432 2249999764
No 97
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=60.80 E-value=2.1 Score=30.47 Aligned_cols=43 Identities=21% Similarity=0.306 Sum_probs=29.5
Q ss_pred eeeecccccccCCceEEe--ccCccccHHHHHHHH----hcCCCCcccc
Q 037568 364 VCCICLAKYVDDDELREL--ICSHVFHVDCVDKWL----KINASCPLCK 406 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~L--PC~H~FH~~CId~WL----~~~~tCPlCR 406 (423)
.|+||...|.+++....= -|.-=||..|+.--- ..+-.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 388999999766544332 378899999976322 2466799885
No 98
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=58.53 E-value=5.2 Score=29.92 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=24.9
Q ss_pred CCceeeecccccccCCceEEe--ccCccccHHHHH
Q 037568 361 EDAVCCICLAKYVDDDELREL--ICSHVFHVDCVD 393 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L--PC~H~FH~~CId 393 (423)
....|.+|...|.+++....- -|.--||..|+.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 345699999999887655444 588999999974
No 99
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=58.21 E-value=1.2 Score=40.88 Aligned_cols=42 Identities=29% Similarity=0.581 Sum_probs=29.9
Q ss_pred CceeeecccccccCCceEEe---ccCccccHHHHHHHHhcC----CCCccccccc
Q 037568 362 DAVCCICLAKYVDDDELREL---ICSHVFHVDCVDKWLKIN----ASCPLCKSEI 409 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~L---PC~H~FH~~CId~WL~~~----~tCPlCR~~I 409 (423)
+..|.+|-.. |+ .| -|...||..|+++-|... =.||.|+..-
T Consensus 7 ~~~C~~C~~~---g~---ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 7 EDWCAVCQNG---GD---LLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSBTTTCCC---EE---EEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCC---Cc---eEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 4569999743 32 33 278999999998877542 3599998653
No 100
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=57.68 E-value=7.2 Score=32.04 Aligned_cols=45 Identities=20% Similarity=0.440 Sum_probs=27.6
Q ss_pred Cceeeecccccc-----cC-CceEEeccCccccHHHHHHH------H-hcCCCCcccc
Q 037568 362 DAVCCICLAKYV-----DD-DELRELICSHVFHVDCVDKW------L-KINASCPLCK 406 (423)
Q Consensus 362 d~eC~ICL~~y~-----dg-e~lr~LPC~H~FH~~CId~W------L-~~~~tCPlCR 406 (423)
...|.+|+..=. ++ +.+.---|...||..|++.+ + +.+=.||-||
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 456999997632 22 23333358999999999632 2 2233566664
No 101
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=57.67 E-value=2.2 Score=33.96 Aligned_cols=52 Identities=25% Similarity=0.449 Sum_probs=32.9
Q ss_pred CCCCceeeecccccccCCceEEe---ccCccccHHHHHHHHh--cCCCCcccccccCC
Q 037568 359 SGEDAVCCICLAKYVDDDELREL---ICSHVFHVDCVDKWLK--INASCPLCKSEIGD 411 (423)
Q Consensus 359 s~ed~eC~ICL~~y~dge~lr~L---PC~H~FH~~CId~WL~--~~~tCPlCR~~I~~ 411 (423)
..++..|.||...-.+.+. ..| -|.-.||..|+..=+. ..=.||.|+.....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~-~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSN-VILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEE-EEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTS
T ss_pred CCCCCcCCcCCCCCCCCCC-CEEECCCCCchhhcccCCCCccCCCceECccccCccch
Confidence 3467789999976422221 222 3788999999975331 12359999775443
No 102
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.57 E-value=1.6 Score=33.88 Aligned_cols=44 Identities=27% Similarity=0.538 Sum_probs=27.2
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhc-----CCCCccccc
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-----NASCPLCKS 407 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-----~~tCPlCR~ 407 (423)
.|.||...=..++.|.-=-|...||..|+++=|.. .=.||.|+.
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 58888864222322211148899999999854432 225999975
No 103
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=51.47 E-value=4 Score=35.92 Aligned_cols=46 Identities=24% Similarity=0.457 Sum_probs=30.1
Q ss_pred CceeeecccccccCCceEEe-ccCccccHHHHHHHH-----hcCCCCcccccc
Q 037568 362 DAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWL-----KINASCPLCKSE 408 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL-----~~~~tCPlCR~~ 408 (423)
..-| ||...+.++..+..= -|.--||..|+.--- ...-.||.|+..
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 3456 999987655433222 378999999985322 124579999763
No 104
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=51.30 E-value=4.5 Score=30.83 Aligned_cols=39 Identities=33% Similarity=0.744 Sum_probs=25.2
Q ss_pred eeeecccccccCCceEEec-----cC-ccccHHHHHHHHhc----CCCCcccccc
Q 037568 364 VCCICLAKYVDDDELRELI-----CS-HVFHVDCVDKWLKI----NASCPLCKSE 408 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LP-----C~-H~FH~~CId~WL~~----~~tCPlCR~~ 408 (423)
..+||-.... ++ .+- |. .-||..||. |.. +-.||.|+..
T Consensus 17 ~~C~C~~~~~-g~---MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 17 TYCLCHQVSY-GE---MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp CCSTTCCCSC-SS---EECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CEEECCCCCC-CC---EeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcc
Confidence 3448987642 43 343 44 589999997 533 2359999764
No 105
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=50.61 E-value=2.2 Score=32.40 Aligned_cols=48 Identities=23% Similarity=0.319 Sum_probs=31.6
Q ss_pred eeeecccccccCCceEEe-ccCccccHHHHHHHH----hcCCCCcccccccCCC
Q 037568 364 VCCICLAKYVDDDELREL-ICSHVFHVDCVDKWL----KINASCPLCKSEIGDS 412 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL----~~~~tCPlCR~~I~~~ 412 (423)
.| ||-..+.+++.+..= -|..=||..|+.--- ..+-.||.|+..-.++
T Consensus 18 ~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~ps 70 (72)
T 1wee_A 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSGPS 70 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCSSC
T ss_pred Ee-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCCCC
Confidence 46 798887766533332 488999999986432 2345699998754443
No 106
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=49.58 E-value=8 Score=43.33 Aligned_cols=50 Identities=10% Similarity=0.038 Sum_probs=43.3
Q ss_pred CCCceeeecccccccCCceEEeccC-ccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 360 GEDAVCCICLAKYVDDDELRELICS-HVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 360 ~ed~eC~ICL~~y~dge~lr~LPC~-H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
++.-.|+|-++-+.|. ..+|-+ +.|-..+|.+||..+.+||.=|.++...
T Consensus 889 P~~F~cPIs~~lM~DP---VilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~ 939 (968)
T 3m62_A 889 PDEFLDPLMYTIMKDP---VILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLE 939 (968)
T ss_dssp CGGGBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGG
T ss_pred cHHhCCcchhhHHhCC---eEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcc
Confidence 4566799999999998 788987 6899999999999999999998887653
No 107
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=48.81 E-value=3.6 Score=33.94 Aligned_cols=44 Identities=25% Similarity=0.554 Sum_probs=28.2
Q ss_pred eeeecccccccCCceEE-eccCccccHHHHHHHHhc----CCCCccccc
Q 037568 364 VCCICLAKYVDDDELRE-LICSHVFHVDCVDKWLKI----NASCPLCKS 407 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~-LPC~H~FH~~CId~WL~~----~~tCPlCR~ 407 (423)
.|.||...-.+++.+.. --|...||..|+++=|.. .=.||.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 57888764222222222 238899999999876643 236999975
No 108
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=46.82 E-value=4.2 Score=32.86 Aligned_cols=44 Identities=25% Similarity=0.352 Sum_probs=28.9
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhc---CCCCccccc
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI---NASCPLCKS 407 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~---~~tCPlCR~ 407 (423)
.-|||-....++..|--=-|.--||..|+..=+.. .-.||.|+.
T Consensus 29 vrCiC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 29 TRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CCCTTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred EEeECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 34499887766643322248899999998753321 246999974
No 109
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=45.94 E-value=2.9 Score=37.80 Aligned_cols=44 Identities=30% Similarity=0.564 Sum_probs=30.3
Q ss_pred ceeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCccccccc
Q 037568 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSEI 409 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~I 409 (423)
..|.+|... |+.+.---|.-.||..|++.=|.. .-.||.|+..-
T Consensus 3 ~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 3 TICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 459999854 543433347899999999765533 22599998653
No 110
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=45.85 E-value=5.8 Score=30.53 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=29.6
Q ss_pred eeecccccccCCceEEe--ccCccccHHHHHHHH---------hcCCCCcccccccCC
Q 037568 365 CCICLAKYVDDDELREL--ICSHVFHVDCVDKWL---------KINASCPLCKSEIGD 411 (423)
Q Consensus 365 C~ICL~~y~dge~lr~L--PC~H~FH~~CId~WL---------~~~~tCPlCR~~I~~ 411 (423)
=|||-....++.-+.-= -|..=||..|+.-=- ..+-.||.|+..-.+
T Consensus 18 ~CiC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 18 RCVCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCSSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred EeECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 33898875555333222 488999999985321 124579999875443
No 111
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=44.17 E-value=3.8 Score=30.01 Aligned_cols=40 Identities=30% Similarity=0.715 Sum_probs=25.8
Q ss_pred CceeeecccccccCCceEEec-----cC-ccccHHHHHHHHhc----CCCCccccc
Q 037568 362 DAVCCICLAKYVDDDELRELI-----CS-HVFHVDCVDKWLKI----NASCPLCKS 407 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LP-----C~-H~FH~~CId~WL~~----~~tCPlCR~ 407 (423)
+...+||-... .|+ .+- |. .-||..|+. |.. +-.||.|+.
T Consensus 8 e~~yC~C~~~~-~g~---mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYCLCHQVS-YGE---MIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CCEETTTTEEC-CSE---EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCcEEECCCCC-CCC---eeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 34566998764 342 333 44 689999998 433 235999965
No 112
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=43.39 E-value=3.4 Score=38.68 Aligned_cols=45 Identities=29% Similarity=0.637 Sum_probs=24.5
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhc-----CCCCcccccc
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI-----NASCPLCKSE 408 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~-----~~tCPlCR~~ 408 (423)
.|.+|-..=..++.+--=-|...||..|+++=|.. .=.||.|+.+
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 58888764222322221148899999999965532 2249999753
No 113
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.09 E-value=14 Score=27.49 Aligned_cols=41 Identities=15% Similarity=0.339 Sum_probs=31.9
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
...|.-|-..+.+++.+. .-+..||.+| .+|-.|+..+...
T Consensus 9 ~~~C~~C~~~I~~~~~v~--a~~~~~H~~C--------F~C~~C~~~L~~~ 49 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEKVS--SLGKDWHKFC--------LKCERCSKTLTPG 49 (76)
T ss_dssp CCBCTTTCCBCCTTTEEE--ETTEEEETTT--------CBCSSSCCBCCTT
T ss_pred CCCCcCCCCEeECCeEEE--ECCeEeeCCC--------CCCCCCCCccCCC
Confidence 346999999998777554 4588999998 4699999888754
No 114
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=42.05 E-value=9.5 Score=28.44 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=10.0
Q ss_pred eeecccccccCCceEEeccCccccHHH
Q 037568 365 CCICLAKYVDDDELRELICSHVFHVDC 391 (423)
Q Consensus 365 C~ICL~~y~dge~lr~LPC~H~FH~~C 391 (423)
|.-|-..+.+++.+..+ +..||.+|
T Consensus 3 C~~C~~~I~~~~~v~a~--~~~~H~~C 27 (76)
T 1iml_A 3 CPKCDKEVYFAERVTSL--GKDWHRPC 27 (76)
T ss_dssp CTTTSSBCCGGGEEEET--TEEEETTT
T ss_pred CCCCCCEEECceEEEEC--CccccCCC
Confidence 44444444433332222 44444444
No 115
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=41.35 E-value=11 Score=28.72 Aligned_cols=52 Identities=29% Similarity=0.496 Sum_probs=33.8
Q ss_pred CceeeecccccccCCceEEe-ccCccccHHHHHHHHh-----cCCCCcccccccCCCC
Q 037568 362 DAVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLK-----INASCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~~I~~~~ 413 (423)
...-+||-..|.++..+..= -|.-=||..|+.---. ..-.||.|+..-.++.
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~~~ 66 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKST 66 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCCCC
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCCCe
Confidence 34577999887644333222 4889999999954321 2456999987655543
No 116
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=40.80 E-value=4.4 Score=29.72 Aligned_cols=40 Identities=30% Similarity=0.688 Sum_probs=25.5
Q ss_pred CceeeecccccccCCceEEec-----cC-ccccHHHHHHHHhc----CCCCccccc
Q 037568 362 DAVCCICLAKYVDDDELRELI-----CS-HVFHVDCVDKWLKI----NASCPLCKS 407 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LP-----C~-H~FH~~CId~WL~~----~~tCPlCR~ 407 (423)
+...+||-... .| ..+- |. .-||..|+. |.. +-.||.|+.
T Consensus 9 e~~~C~C~~~~-~g---~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYCLCHQVS-YG---EMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEETTTTEEC-CS---EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCEEECCCcC-CC---CEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 34566998764 24 2343 33 579999998 543 235999964
No 117
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.44 E-value=16 Score=27.73 Aligned_cols=39 Identities=21% Similarity=0.497 Sum_probs=30.9
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
...|.-|-..+.+++.+.. -+..||.+| .+|-.|+..+.
T Consensus 15 ~~~C~~C~~~I~~~~~v~a--~~~~wH~~C--------F~C~~C~~~L~ 53 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSLLA--LDKQWHVSC--------FKCQTCSVILT 53 (80)
T ss_dssp CSCCTTTCCCCSSSCCEEE--TTEEECTTT--------CBCSSSCCBCS
T ss_pred CCCCcCcCCeeCCCeEEEE--CCccccccc--------CCcCcCCCCcC
Confidence 3569999999988876654 478999998 56889988876
No 118
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=36.03 E-value=19 Score=31.15 Aligned_cols=43 Identities=21% Similarity=0.464 Sum_probs=29.1
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHh-----------cCCCCccccc
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLK-----------INASCPLCKS 407 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~-----------~~~tCPlCR~ 407 (423)
+..|.+|-+. |+.+--=.|.-.||..||++=|. ..=.||.|+.
T Consensus 63 ~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 63 DEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp BCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 4569999863 43222224889999999997652 1235999974
No 119
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.63 E-value=24 Score=26.74 Aligned_cols=42 Identities=21% Similarity=0.564 Sum_probs=31.8
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~~ 413 (423)
...|.-|-..+.+++.+. .-+..||.+| .+|-.|+..+....
T Consensus 15 ~~~C~~C~~~I~~~e~v~--a~~~~wH~~C--------F~C~~C~~~L~~~~ 56 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLC--VNGHFFHRSC--------FRCHTCEATLWPGG 56 (82)
T ss_dssp SCBCSSSCCBCCTTTBCC--BTTBCCBTTT--------CBCSSSCCBCCTTS
T ss_pred CCCCcccCCCcccceEEE--ECCCeeCCCc--------CEEcCCCCCcCCCc
Confidence 356999999988777664 3578999999 45888888776543
No 120
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=35.37 E-value=10 Score=39.33 Aligned_cols=52 Identities=31% Similarity=0.483 Sum_probs=33.6
Q ss_pred CceeeecccccccCCceEE-eccCccccHHHHHHHHh-----cCCCCcccccccCCCC
Q 037568 362 DAVCCICLAKYVDDDELRE-LICSHVFHVDCVDKWLK-----INASCPLCKSEIGDSS 413 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~-LPC~H~FH~~CId~WL~-----~~~tCPlCR~~I~~~~ 413 (423)
+...|||-..+.++..+.. --|.-=||..|+.-=-. .+-.||.|+..-.++.
T Consensus 36 ~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~ 93 (488)
T 3kv5_D 36 PPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHGSSL 93 (488)
T ss_dssp CCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHHCSCE
T ss_pred CCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCcCcch
Confidence 4456799988764443322 24889999999853221 2357999987655543
No 121
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=34.64 E-value=9.1 Score=31.55 Aligned_cols=43 Identities=23% Similarity=0.387 Sum_probs=26.9
Q ss_pred eeeeccccccc----C---CceEEeccCccccHHHHHHHHh-------cCCCCcccc
Q 037568 364 VCCICLAKYVD----D---DELRELICSHVFHVDCVDKWLK-------INASCPLCK 406 (423)
Q Consensus 364 eC~ICL~~y~d----g---e~lr~LPC~H~FH~~CId~WL~-------~~~tCPlCR 406 (423)
.|.||+..-.. | +.+.---|...||..|++.+++ ..=.||.|+
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 49999876421 2 2233335899999999986632 233566663
No 122
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=32.58 E-value=11 Score=28.68 Aligned_cols=20 Identities=30% Similarity=0.539 Sum_probs=15.1
Q ss_pred HHHHHhcCCCCcccccccCC
Q 037568 392 VDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 392 Id~WL~~~~tCPlCR~~I~~ 411 (423)
+|+||..--.||.||.++.-
T Consensus 1 md~~LLeiL~CP~ck~~L~~ 20 (69)
T 2pk7_A 1 MDTKLLDILACPICKGPLKL 20 (69)
T ss_dssp --CCGGGTCCCTTTCCCCEE
T ss_pred CChHHHhheeCCCCCCcCeE
Confidence 46788888899999998754
No 123
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=32.12 E-value=21 Score=29.34 Aligned_cols=45 Identities=20% Similarity=0.497 Sum_probs=27.9
Q ss_pred CCceeeecccccccCCceEEe---ccCccccHHHHHHHHhcC----CCCcccccccCC
Q 037568 361 EDAVCCICLAKYVDDDELREL---ICSHVFHVDCVDKWLKIN----ASCPLCKSEIGD 411 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~L---PC~H~FH~~CId~WL~~~----~tCPlCR~~I~~ 411 (423)
++..|.+|-+ .|+ +..= -|...||..|+. |... =.||.|+-.+-.
T Consensus 14 ~~~~C~~C~~---~G~-ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~ 65 (107)
T 4gne_A 14 HEDYCFQCGD---GGE-LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECS 65 (107)
T ss_dssp SCSSCTTTCC---CSE-EEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTC
T ss_pred CCCCCCcCCC---CCc-EeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCC
Confidence 4556999983 232 2222 266899999998 5432 248877655543
No 124
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=30.92 E-value=9.4 Score=28.86 Aligned_cols=21 Identities=24% Similarity=0.222 Sum_probs=16.5
Q ss_pred HHHHHhcCCCCcccccccCCC
Q 037568 392 VDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 392 Id~WL~~~~tCPlCR~~I~~~ 412 (423)
+|+||..--.||+||.++.-.
T Consensus 3 md~~LLeiL~CP~ck~~L~~~ 23 (67)
T 2jny_A 3 LDPQLLEVLACPKDKGPLRYL 23 (67)
T ss_dssp SCGGGTCCCBCTTTCCBCEEE
T ss_pred CCHHHHHHhCCCCCCCcCeEe
Confidence 467888888999999987543
No 125
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.60 E-value=3.3 Score=31.51 Aligned_cols=46 Identities=24% Similarity=0.400 Sum_probs=26.7
Q ss_pred ceeeecccccccCCceEEecc---CccccHHHHHHHHhc----CCCCcccccccCC
Q 037568 363 AVCCICLAKYVDDDELRELIC---SHVFHVDCVDKWLKI----NASCPLCKSEIGD 411 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC---~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 411 (423)
..-+||-... +++.|.---| ..-||..||. |.. .-.||.|+....+
T Consensus 6 ~~yC~C~~~~-~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~~k 58 (70)
T 1x4i_A 6 SGYCICNQVS-YGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAAMKR 58 (70)
T ss_dssp CCCSTTSCCC-CSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHHHHH
T ss_pred CeEEEcCCCC-CCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCccccc
Confidence 3455787753 4432221123 2689999997 332 2359999876543
No 126
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=30.48 E-value=6.2 Score=29.73 Aligned_cols=43 Identities=16% Similarity=0.479 Sum_probs=26.9
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHH---hcCCCCccccc
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWL---KINASCPLCKS 407 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL---~~~~tCPlCR~ 407 (423)
.| ||-..+.++.-|.---|..=||..|+.-=- ...-.||.|+.
T Consensus 21 ~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 21 TC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp CS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred Ee-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 36 998876533222222488999999986422 12346999864
No 127
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=30.42 E-value=7.7 Score=31.61 Aligned_cols=48 Identities=25% Similarity=0.425 Sum_probs=28.8
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccccccCC
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSEIGD 411 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~I~~ 411 (423)
.|.||-..-.+...+.---|...||..|+++=|+. .-.||.|+.-...
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~~g 107 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICISG 107 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCSCS
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcCCC
Confidence 46677655332221222237899999999865543 3359999765433
No 128
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=30.09 E-value=28 Score=34.80 Aligned_cols=46 Identities=20% Similarity=0.378 Sum_probs=28.8
Q ss_pred eeeecccccccCCceEEeccCcc--ccHHHHHHHHhc--CCCCcccccccCC
Q 037568 364 VCCICLAKYVDDDELRELICSHV--FHVDCVDKWLKI--NASCPLCKSEIGD 411 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~--FH~~CId~WL~~--~~tCPlCR~~I~~ 411 (423)
.|+|=+..+.. .+|-..|.|. |-.+=+-..-.. .-.||+|.+.+..
T Consensus 251 ~CPlS~~ri~~--PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~ 300 (371)
T 3i2d_A 251 QCPISYTRMKY--PSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIAL 300 (371)
T ss_dssp BCTTTSSBCSS--EEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCG
T ss_pred cCCCccccccc--cCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCH
Confidence 48877666544 4688889987 544333332222 3569999887743
No 129
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=30.06 E-value=5.1 Score=31.06 Aligned_cols=26 Identities=35% Similarity=0.892 Sum_probs=18.9
Q ss_pred cCccccHHHHHHHHhc----C-CCCcccccc
Q 037568 383 CSHVFHVDCVDKWLKI----N-ASCPLCKSE 408 (423)
Q Consensus 383 C~H~FH~~CId~WL~~----~-~tCPlCR~~ 408 (423)
|...||..|++.=|.. . =.||.|+.+
T Consensus 47 C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~d 77 (77)
T 3shb_A 47 CDMAFHIYCLDPPLSSVPSEDEWYCPECRND 77 (77)
T ss_dssp TCCEEETTTSSSCCSSCCSSSCCCCTTTC--
T ss_pred CCCccCcccCCCcccCCCCCCceECcCcccc
Confidence 7899999999976643 1 369999863
No 130
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=27.75 E-value=12 Score=38.30 Aligned_cols=50 Identities=30% Similarity=0.511 Sum_probs=33.4
Q ss_pred ceeeecccccccCCceEEe-ccCccccHHHHHHHHh-----cCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLK-----INASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~-----~~~tCPlCR~~I~~~ 412 (423)
...|||-..+.++..+..- -|.-=||..|+.-=-. .+-.||.|+..-.+.
T Consensus 5 ~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~~ 60 (447)
T 3kv4_A 5 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS 60 (447)
T ss_dssp CEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHCCC
T ss_pred CeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccCCc
Confidence 4689999988644433332 4889999999852111 245799998765544
No 131
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=27.17 E-value=14 Score=24.20 Aligned_cols=10 Identities=40% Similarity=1.182 Sum_probs=6.0
Q ss_pred CCcccccccC
Q 037568 401 SCPLCKSEIG 410 (423)
Q Consensus 401 tCPlCR~~I~ 410 (423)
.||+|++.+.
T Consensus 7 iCP~C~~~l~ 16 (34)
T 3mjh_B 7 ICPQCMKSLG 16 (34)
T ss_dssp ECTTTCCEES
T ss_pred CCcHHHHHcC
Confidence 4777766553
No 132
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=26.80 E-value=35 Score=33.99 Aligned_cols=46 Identities=17% Similarity=0.400 Sum_probs=29.4
Q ss_pred eeeecccccccCCceEEeccCcc--ccHHHHHHHHhc--CCCCcccccccCC
Q 037568 364 VCCICLAKYVDDDELRELICSHV--FHVDCVDKWLKI--NASCPLCKSEIGD 411 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~--FH~~CId~WL~~--~~tCPlCR~~I~~ 411 (423)
.|+|=+..+.. .+|-..|.|. |-..=+-..... .-.||+|.+.+..
T Consensus 217 ~CPlS~~ri~~--P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~ 266 (360)
T 4fo9_A 217 MCPLGKMRLTI--PCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAY 266 (360)
T ss_dssp BCTTTCSBCSS--EEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCG
T ss_pred eCCCccceecc--CCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCH
Confidence 48877666544 4678889987 554433333332 3569999988753
No 133
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=26.21 E-value=19 Score=30.73 Aligned_cols=33 Identities=12% Similarity=0.182 Sum_probs=22.8
Q ss_pred CCceeeecccccc--cCCceEEeccCccccHHHHH
Q 037568 361 EDAVCCICLAKYV--DDDELRELICSHVFHVDCVD 393 (423)
Q Consensus 361 ed~eC~ICL~~y~--dge~lr~LPC~H~FH~~CId 393 (423)
++..|.+|...|. .+-...-.-|+|.++..|-.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 3567999999994 23233333589999999844
No 134
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.73 E-value=43 Score=24.17 Aligned_cols=39 Identities=21% Similarity=0.552 Sum_probs=27.5
Q ss_pred ceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
..|.-|-..+.+ +.+ ..-+..||.+|. +|-.|+..|...
T Consensus 6 ~~C~~C~~~I~~-~~~--~a~~~~~H~~CF--------~C~~C~~~L~~~ 44 (70)
T 2d8x_A 6 SGCHQCGEFIIG-RVI--KAMNNSWHPECF--------RCDLCQEVLADI 44 (70)
T ss_dssp SBCSSSCCBCCS-CCE--EETTEEECTTTS--------BCSSSCCBCSSS
T ss_pred CcCccCCCEecc-eEE--EECcccccccCC--------EeCCCCCcCCCC
Confidence 458888888763 333 335788998883 688888887654
No 135
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=24.61 E-value=16 Score=22.87 Aligned_cols=13 Identities=31% Similarity=0.823 Sum_probs=8.9
Q ss_pred CCCCcccccccCC
Q 037568 399 NASCPLCKSEIGD 411 (423)
Q Consensus 399 ~~tCPlCR~~I~~ 411 (423)
+.+||+||.....
T Consensus 3 k~~CpvCk~q~Pd 15 (28)
T 2jvx_A 3 DFCCPKCQYQAPD 15 (28)
T ss_dssp CEECTTSSCEESS
T ss_pred cccCccccccCcC
Confidence 4579999876543
No 136
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=24.60 E-value=4.1 Score=33.69 Aligned_cols=47 Identities=26% Similarity=0.437 Sum_probs=29.2
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhc----CCCCcccccccC
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKI----NASCPLCKSEIG 410 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~----~~tCPlCR~~I~ 410 (423)
.|.||-..-.+++.+.---|...||..|+++=|.. .=.||.|+..+.
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 110 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLK 110 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccchhh
Confidence 47788765333432222248899999999864433 224999976543
No 137
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=24.58 E-value=13 Score=27.45 Aligned_cols=40 Identities=28% Similarity=0.723 Sum_probs=25.4
Q ss_pred CceeeecccccccCCceEEec-----cC-ccccHHHHHHHHhc----CCCCccccc
Q 037568 362 DAVCCICLAKYVDDDELRELI-----CS-HVFHVDCVDKWLKI----NASCPLCKS 407 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LP-----C~-H~FH~~CId~WL~~----~~tCPlCR~ 407 (423)
+...+||-... .|+ .+- |. .-||..||. |.. +-.||.|+.
T Consensus 10 e~~yC~C~~~~-~g~---MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 10 EPTYCLCNQVS-YGE---MIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CCEETTTTEEC-CSE---EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCcEEECCCCC-CCC---eeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 34556998763 342 333 44 789999997 432 345999965
No 138
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=24.22 E-value=27 Score=26.36 Aligned_cols=30 Identities=27% Similarity=0.653 Sum_probs=23.8
Q ss_pred CCceeeecccccccCCceEEecc-CccccHHHHHH
Q 037568 361 EDAVCCICLAKYVDDDELRELIC-SHVFHVDCVDK 394 (423)
Q Consensus 361 ed~eC~ICL~~y~dge~lr~LPC-~H~FH~~CId~ 394 (423)
+..-|+||.++ ..+|-+-| +-+|+..|..+
T Consensus 7 e~pWC~ICneD----AtlrC~gCdgDLYC~rC~rE 37 (67)
T 2d8v_A 7 GLPWCCICNED----ATLRCAGCDGDLYCARCFRE 37 (67)
T ss_dssp CCSSCTTTCSC----CCEEETTTTSEEECSSHHHH
T ss_pred CCCeeEEeCCC----CeEEecCCCCceehHHHHHH
Confidence 34569999987 55888889 78999999665
No 139
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=23.74 E-value=6.7 Score=29.34 Aligned_cols=44 Identities=30% Similarity=0.523 Sum_probs=26.7
Q ss_pred ceeeecccccccCCceEEe---ccCccccHHHHHHH---Hh-----cCCCCccccc
Q 037568 363 AVCCICLAKYVDDDELREL---ICSHVFHVDCVDKW---LK-----INASCPLCKS 407 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~L---PC~H~FH~~CId~W---L~-----~~~tCPlCR~ 407 (423)
..-+||-....++. +..- -|..=||..|+.-- .+ .+-.||.||.
T Consensus 10 ~v~C~C~~~~~~g~-mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 10 KVRCICSSTMVNDS-MIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp EECCTTCCCSCCSC-EEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CEEeECCCCcCCCC-EEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 34558977666653 2222 27788999997310 00 1356999974
No 140
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.16 E-value=81 Score=24.04 Aligned_cols=40 Identities=25% Similarity=0.644 Sum_probs=29.4
Q ss_pred ceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
..|.-|-..+.+++.+ ..-+..||.+| .+|=.|+..|...
T Consensus 16 ~~C~~C~~~I~~~~~v--~a~~~~~H~~C--------F~C~~C~~~L~~~ 55 (91)
T 2d8y_A 16 ETCVECQKTVYPMERL--LANQQVFHISC--------FRCSYCNNKLSLG 55 (91)
T ss_dssp CBCTTTCCBCCTTSEE--ECSSSEEETTT--------CBCTTTCCBCCTT
T ss_pred CcCccCCCccCCceeE--EECCCEECCCC--------CeeCCCCCCCCCC
Confidence 4599999988877644 45678899888 3577787777654
No 141
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=22.95 E-value=24 Score=26.45 Aligned_cols=40 Identities=20% Similarity=0.521 Sum_probs=28.4
Q ss_pred ceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
..|..|-..+.+++.++ .-+..||.+| .+|-.|+..+...
T Consensus 8 ~~C~~C~~~I~~~~~~~--a~~~~~H~~C--------F~C~~C~~~L~~~ 47 (81)
T 1a7i_A 8 NKCGACGRTVYHAEEVQ--CDGRSFHRCC--------FLCMVCRKNLDST 47 (81)
T ss_dssp CBCSSSCCBCSSTTEEE--ETTEEEESSS--------EECSSSCCEECSS
T ss_pred CcCcCcCccccCceeEE--eCCccccccc--------CccCCCCCCCCCC
Confidence 45888888887776443 3578888888 3477888777554
No 142
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=22.85 E-value=11 Score=28.45 Aligned_cols=43 Identities=28% Similarity=0.617 Sum_probs=25.8
Q ss_pred eeeecccccccCCceEEe-ccCccccHHHHHHHHhc-----CCCCccccc
Q 037568 364 VCCICLAKYVDDDELREL-ICSHVFHVDCVDKWLKI-----NASCPLCKS 407 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~L-PC~H~FH~~CId~WL~~-----~~tCPlCR~ 407 (423)
.|.||...=..+ ++..= -|...||..|++.=|.. .=.||.|+.
T Consensus 20 ~C~~C~~~~~~~-~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGG-GEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCC-CEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 366776542222 22211 37899999999864432 225999975
No 143
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=22.61 E-value=26 Score=25.60 Aligned_cols=19 Identities=26% Similarity=0.854 Sum_probs=14.3
Q ss_pred HHhc-CCCCcccccccCCCC
Q 037568 395 WLKI-NASCPLCKSEIGDSS 413 (423)
Q Consensus 395 WL~~-~~tCPlCR~~I~~~~ 413 (423)
|++. ...||.|+..|.++.
T Consensus 1 wi~~~~k~CP~C~~~Iek~~ 20 (60)
T 1wd2_A 1 WIAANTKECPKCHVTIEKDG 20 (60)
T ss_dssp CCCCCCCCCTTTCCCCSSCC
T ss_pred CccccceECcCCCCeeEeCC
Confidence 5543 467999999998864
No 144
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.42 E-value=52 Score=23.84 Aligned_cols=41 Identities=17% Similarity=0.383 Sum_probs=29.0
Q ss_pred ceeeeccccccc--CCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVD--DDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~d--ge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
..|.-|-..+.+ ++++ ...-+..||.+| .+|-.|+..+...
T Consensus 6 ~~C~~C~~~I~~~~~~~~-~~a~~~~wH~~C--------F~C~~C~~~L~~~ 48 (72)
T 1x4l_A 6 SGCAGCTNPISGLGGTKY-ISFEERQWHNDC--------FNCKKCSLSLVGR 48 (72)
T ss_dssp CSBTTTTBCCCCSSSCSC-EECSSCEECTTT--------CBCSSSCCBCTTS
T ss_pred CCCcCCCccccCCCCcce-EEECCcccCccc--------CEeccCCCcCCCC
Confidence 359999988886 3332 233688999988 4688898887643
No 145
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=22.21 E-value=33 Score=27.95 Aligned_cols=12 Identities=25% Similarity=0.947 Sum_probs=10.5
Q ss_pred cccHHHHHHHHh
Q 037568 386 VFHVDCVDKWLK 397 (423)
Q Consensus 386 ~FH~~CId~WL~ 397 (423)
-|+..|+.+|++
T Consensus 42 GFCRNCLskWy~ 53 (105)
T 2o35_A 42 GFCRNCLSNWYR 53 (105)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 489999999995
No 146
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=22.19 E-value=9.7 Score=27.67 Aligned_cols=20 Identities=20% Similarity=0.529 Sum_probs=14.9
Q ss_pred HHHHHhcCCCCcccccccCC
Q 037568 392 VDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 392 Id~WL~~~~tCPlCR~~I~~ 411 (423)
+|+||..--.||.||.++.-
T Consensus 3 ~d~~lL~iL~CP~c~~~L~~ 22 (56)
T 2kpi_A 3 LEAGLLEILACPACHAPLEE 22 (56)
T ss_dssp CCCSCTTSCCCSSSCSCEEE
T ss_pred CCHHHHhheeCCCCCCccee
Confidence 35677767789999998643
No 147
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=21.86 E-value=34 Score=27.84 Aligned_cols=12 Identities=42% Similarity=0.999 Sum_probs=10.5
Q ss_pred cccHHHHHHHHh
Q 037568 386 VFHVDCVDKWLK 397 (423)
Q Consensus 386 ~FH~~CId~WL~ 397 (423)
-|+..|+.+|+.
T Consensus 41 GFCRNCLskWy~ 52 (104)
T 3fyb_A 41 DFCRNCLAKWLM 52 (104)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 489999999995
No 148
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.50 E-value=47 Score=24.71 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=28.4
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCC
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
...|.-|-..+.+ + ....-+..||.+|. +|-.|+..|..
T Consensus 15 ~~~C~~C~~~I~~-~--~~~a~~~~~H~~CF--------~C~~C~~~L~~ 53 (79)
T 1x62_A 15 LPMCDKCGTGIVG-V--FVKLRDRHRHPECY--------VCTDCGTNLKQ 53 (79)
T ss_dssp CCCCSSSCCCCCS-S--CEECSSCEECTTTT--------SCSSSCCCHHH
T ss_pred CCccccCCCCccC-c--EEEECcceeCcCcC--------eeCCCCCCCCC
Confidence 3569999998875 3 23446899999994 58888887743
No 149
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.47 E-value=65 Score=23.22 Aligned_cols=39 Identities=28% Similarity=0.594 Sum_probs=24.0
Q ss_pred ceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccC
Q 037568 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIG 410 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~ 410 (423)
..|.-|-..+...+.+ ...=+..||.+| .+|-.|+..+.
T Consensus 6 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~C--------F~C~~C~~~L~ 44 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAG-VVALDRVFHVGC--------FVCSTCRAQLR 44 (72)
T ss_dssp CCCSSSCSCCCSSSCC-EECSSSEECTTT--------CBCSSSCCBCT
T ss_pred CCCccCCCccCCCceE-EEECCCeEcccC--------CcccccCCcCC
Confidence 3477887776654322 222467788777 35777777774
No 150
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=21.42 E-value=11 Score=28.47 Aligned_cols=19 Identities=21% Similarity=0.302 Sum_probs=14.2
Q ss_pred HHHHhcCCCCcccccccCC
Q 037568 393 DKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 393 d~WL~~~~tCPlCR~~I~~ 411 (423)
|+||..--.||.||.++.-
T Consensus 2 d~~LL~iL~CP~ck~~L~~ 20 (68)
T 2jr6_A 2 EKKFLDILVCPVTKGRLEY 20 (68)
T ss_dssp CCSSSCCCBCSSSCCBCEE
T ss_pred ChHHhhheECCCCCCcCeE
Confidence 4566667789999988753
No 151
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.92 E-value=62 Score=23.30 Aligned_cols=40 Identities=20% Similarity=0.407 Sum_probs=28.2
Q ss_pred eeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 364 VCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 364 eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
.|.-|-..+.+++.+. ..-+..||.+| .+|-.|+..+...
T Consensus 7 ~C~~C~~~I~~~~~~~-~a~~~~~H~~C--------F~C~~C~~~L~~~ 46 (72)
T 1x4k_A 7 GCQECKKTIMPGTRKM-EYKGSSWHETC--------FICHRCQQPIGTK 46 (72)
T ss_dssp CBSSSCCCCCSSSCEE-EETTEEEETTT--------TCCSSSCCCCCSS
T ss_pred CCccCCCcccCCceEE-EECcCeecccC--------CcccccCCccCCC
Confidence 4899998888765432 22577889888 4588888877654
No 152
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=20.39 E-value=48 Score=28.11 Aligned_cols=44 Identities=25% Similarity=0.542 Sum_probs=27.8
Q ss_pred CceeeecccccccCCceEEeccCccccHHHHHHHH------hc-----CCCCcccccc
Q 037568 362 DAVCCICLAKYVDDDELRELICSHVFHVDCVDKWL------KI-----NASCPLCKSE 408 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL------~~-----~~tCPlCR~~ 408 (423)
+..|.||-+. |+.+--=-|-..||.+||++=+ +. .=.|++|+..
T Consensus 57 ~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 57 DEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp BSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 4559999864 3211111378999999999742 22 2369999654
No 153
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.24 E-value=69 Score=23.73 Aligned_cols=41 Identities=32% Similarity=0.593 Sum_probs=30.1
Q ss_pred ceeeecccccccCCceEEeccCccccHHHHHHHHhcCCCCcccccccCCC
Q 037568 363 AVCCICLAKYVDDDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGDS 412 (423)
Q Consensus 363 ~eC~ICL~~y~dge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~~ 412 (423)
..|.-|-..+..++.+ ...=+..||.+| .+|-.|+..+...
T Consensus 16 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~C--------F~C~~C~~~L~~~ 56 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQN-VEYKGTVWHKDC--------FTCSNCKQVIGTG 56 (82)
T ss_dssp CBCSSSCCBCCSSSCE-EECSSCEEETTT--------CCCSSSCCCCTTS
T ss_pred CcCccCCcccccCceE-EEECcccccccc--------CchhhCCCccCCC
Confidence 4599999988876653 223478999988 4688888887654
No 154
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.17 E-value=65 Score=23.66 Aligned_cols=39 Identities=15% Similarity=0.428 Sum_probs=27.8
Q ss_pred eeeeccccccc--CCceEEeccCccccHHHHHHHHhcCCCCcccccccCC
Q 037568 364 VCCICLAKYVD--DDELRELICSHVFHVDCVDKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 364 eC~ICL~~y~d--ge~lr~LPC~H~FH~~CId~WL~~~~tCPlCR~~I~~ 411 (423)
.|.-|-..+.+ +++. ...-+..||.+| .+|-.|+..+..
T Consensus 7 ~C~~C~~~I~~~g~~~~-~~a~~~~wH~~C--------F~C~~C~~~L~~ 47 (76)
T 1x68_A 7 GCVACSKPISGLTGAKF-ICFQDSQWHSEC--------FNCGKCSVSLVG 47 (76)
T ss_dssp CCTTTCCCCCTTTTCCE-EEETTEEEEGGG--------CBCTTTCCBCSS
T ss_pred CCccCCCcccCCCCcee-EEECCcccCccc--------CChhhCCCcCCC
Confidence 49999988885 3222 334678999998 468888887763
No 155
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=20.13 E-value=66 Score=25.26 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=27.5
Q ss_pred CceeeecccccccCCceEEec--cCccccHHHHHHHHhc
Q 037568 362 DAVCCICLAKYVDDDELRELI--CSHVFHVDCVDKWLKI 398 (423)
Q Consensus 362 d~eC~ICL~~y~dge~lr~LP--C~H~FH~~CId~WL~~ 398 (423)
...|.+|-+.++|-.-+ +-| =.|.|+-.|-..-++.
T Consensus 15 ~l~CtlC~erLEdtHFV-QCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFV-QCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp SCCCSSSCSCCSSTTSE-ECSSCSSCEECHHHHHHHHHH
T ss_pred eeEeecchhhhccCcee-eCCCccCCeeeccccHHHHHh
Confidence 35699999999987533 223 2699999999999865
No 156
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=20.06 E-value=11 Score=28.46 Aligned_cols=19 Identities=32% Similarity=0.452 Sum_probs=13.7
Q ss_pred HHHHhcCCCCcccccccCC
Q 037568 393 DKWLKINASCPLCKSEIGD 411 (423)
Q Consensus 393 d~WL~~~~tCPlCR~~I~~ 411 (423)
|+||..--.||.||.++.-
T Consensus 2 d~~LL~iL~CP~ck~~L~~ 20 (68)
T 2hf1_A 2 DAKFLEILVCPLCKGPLVF 20 (68)
T ss_dssp CCCCEEECBCTTTCCBCEE
T ss_pred ChHHhhheECCCCCCcCeE
Confidence 4566666789999987753
Done!