BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037570
(254 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 22 LKPSTNSIELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTL 81
+ T+S L PP P +P+ G++ L PH +L +S++YG ++ + +G +P +
Sbjct: 1 MAKKTSSKGLKNPPGPWGWPLIGHM---LTLGKNPHLALSRMSQQYGDVLQIRIGSTPVV 57
Query: 82 VVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSP-YGEYWRQARKTCVLGL 139
V+S + R+ + F RP + G Q + FSP G W R+ GL
Sbjct: 58 VLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNG-QSMSFSPDSGPVWAARRRLAQNGL 115
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P FPI GN+ Q+ A SL S+ YGP+ ++LG PT+V+ E +E
Sbjct: 10 KLPPGPTPFPIIGNILQI--DAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIV 151
+ + F+ R G I FS + W++ R+ ++ L N +
Sbjct: 68 ALVDLGEEFAGRGSVPILEKVSKGL-GIAFS-NAKTWKEMRRFSLMTLRNF------GMG 119
Query: 152 SRSVLGRRAEE 162
RS+ R EE
Sbjct: 120 KRSIEDRIQEE 130
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 21 GLKPSTNSIELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPT 80
GL+P L PP P +P+ G++ L PH +L +S++YG ++ + +G +P
Sbjct: 6 GLRPRVPK-GLKSPPEPWGWPLLGHV---LTLGKNPHLALSRMSQRYGDVLQIRIGSTPV 61
Query: 81 LVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSP-YGEYWRQARKTCVLGL 139
LV+S + R+ + F RP + + G Q + FS G W AR+
Sbjct: 62 LVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDG-QSLTFSTDSGPVW-AARRRLAQNA 119
Query: 140 LNVILTVSNNIVSRSV-LGRRAEEETAGKCNKFGEL 174
LN S+ S S L +E ++ EL
Sbjct: 120 LNTFSIASDPASSSSCYLEEHVSKEAKALISRLQEL 155
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P+ GNL Q+ L S L +KYG + ++LG P +V+ + RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK------------------ 133
+ + FS R K + G I + GE WR R+
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 134 ------TCVLGLL---------NVIL--TVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176
C++ L N +L ++++NI+ V G+R + + + +L
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL-RLLDLFF 184
Query: 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPN 236
+ SFS + G+L G ++ + +E++ Q +EKHR + D N
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL---DPSN 241
Query: 237 RKDLVHVY 244
+D + VY
Sbjct: 242 PRDFIDVY 249
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P+ GNL Q+ L S L +KYG + ++LG P +V+ + RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK------------------ 133
+ + FS R K + G I + GE WR R+
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 134 ------TCVLGLL---------NVIL--TVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176
C++ L N +L ++++NI+ V G+R + + + +L
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL-RLLDLFF 184
Query: 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPN 236
+ SFS + G+L G ++ + +E++ Q +EKHR + D N
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL---DPSN 241
Query: 237 RKDLVHVY 244
+D + VY
Sbjct: 242 PRDFIDVY 249
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P+ GNL Q+ L S L +KYG + ++LG P +V+ + RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK------------------ 133
+ + FS R K + G I + GE WR R+
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 134 ------TCVLGLL---------NVIL--TVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176
C++ L N +L ++++NI+ V G+R + + + +L
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL-RLLDLFF 184
Query: 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPN 236
+ SFS + G+L G ++ + +E++ Q +EKHR + D N
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL---DPSN 241
Query: 237 RKDLVHVY 244
+D + VY
Sbjct: 242 PRDFIDVY 249
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 34 PPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREII 93
P S P+ G+L L + H + L KKYGP+ + +G T++V ++A+E++
Sbjct: 10 PKSLLSLPLVGSLPFLPRHGHM-HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVL 68
Query: 94 KNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCV 136
FS RP+ ++ + I F+ G +W+ R+ +
Sbjct: 69 IKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAM 111
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P+ GNL Q+ L S L +KYG + ++LG P +V+ + RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK------------------ 133
+ + FS R K + G I + GE WR R+
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 134 ------TCVLGLL---------NVIL--TVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176
C++ L N +L ++++NI+ V G+R + + + +L
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL-RLLDLFF 184
Query: 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPN 236
+ SFS + G+L G ++ + +E++ Q +EKHR + D N
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL---DPSN 241
Query: 237 RKDLVHVY 244
+D + VY
Sbjct: 242 PRDFIDVY 249
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 34 PPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREII 93
PP P +P+ GN +G A H S L+++YG + + LG P +V++ + +
Sbjct: 11 PPGPFAWPLIGNA-AAVGQAA--HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQAL 67
Query: 94 KNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTC 135
F++RP + V + G + + F Y E+W+ R+
Sbjct: 68 VQQGSAFADRPSFASFRV-VSGGRSMAFGHYSEHWKVQRRAA 108
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P+ GNL Q+ L S L +KYG + ++LG P +V+ + RE
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK------------------ 133
+ + FS R K + G I + GE WR R+
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 134 ------TCVLGLL---------NVIL--TVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176
C++ L N +L ++++NI+ V G+R + + + +L
Sbjct: 126 RIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL-RLLDLFF 184
Query: 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPN 236
+ SFS + G+L G ++ + +E++ Q +EKHR + D N
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATL---DPSN 241
Query: 237 RKDLVHVY 244
+D + VY
Sbjct: 242 PRDFIDVY 249
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 25 STNSIELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVS 84
T+S LPP P P+ GN+ Q+ G + SL LSK YGP+ ++ G P +V+
Sbjct: 4 KTSSGRGKLPPGPTPLPVIGNILQI-GIKDI-SKSLTNLSKVYGPVFTLYFGLKPIVVLH 61
Query: 85 SAEIAREIIKNHDIVFSNR---PKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN 141
E +E + + FS R P AN I FS G+ W++ R+ ++ L N
Sbjct: 62 GYEAVKEALIDLGEEFSGRGIFPLAERANRGF----GIVFS-NGKKWKEIRRFSLMTLRN 116
Query: 142 VILTVSNNIVSRSVLGRRAEE 162
+ RS+ R EE
Sbjct: 117 F------GMGKRSIEDRVQEE 131
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P GN QL T + + SL +S++YGP+ +HLG +V+ + RE
Sbjct: 10 KLPPGPTPLPFIGNYLQL-NTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIV 151
+ + FS R + + +++ + FS GE +Q R+ I T+ + V
Sbjct: 68 ALVDQAEEFSGRGEQATFD-WVFKGYGVVFS-NGERAKQLRRFS-------IATLRDFGV 118
Query: 152 SRSVLGRRAEEET-----------AGKCNKFGELSRRILVQFVSFSFGDMLPY-----LG 195
+ + R +EE + LSR + S FGD Y L
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 196 WLDVVTGLIGRLTASSREVDVLFDQVIE 223
L ++ G+ + S+ ++ +F V++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P GN QL T + + SL +S++YGP+ +HLG +V+ + RE
Sbjct: 10 KLPPGPTPLPFIGNYLQL-NTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIV 151
+ + FS R + + +++ + FS GE +Q R+ I T+ + V
Sbjct: 68 ALVDQAEEFSGRGEQATFD-WVFKGYGVVFS-NGERAKQLRRFS-------IATLRDFGV 118
Query: 152 SRSVLGRRAEEET-----------AGKCNKFGELSRRILVQFVSFSFGDMLPY-----LG 195
+ + R +EE + LSR + S FGD Y L
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 196 WLDVVTGLIGRLTASSREVDVLFDQVIE 223
L ++ G+ + S+ ++ +F V++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P GN QL T + + SL +S++YGP+ +HLG +V+ + RE
Sbjct: 10 KLPPGPTPLPFIGNYLQL-NTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIV 151
+ + FS R + + +++ + FS GE +Q R+ I T+ + V
Sbjct: 68 ALVDQAEEFSGRGEQATFD-WVFKGYGVVFS-NGERAKQLRRFS-------IATLRDFGV 118
Query: 152 SRSVLGRRAEEET-----------AGKCNKFGELSRRILVQFVSFSFGDMLPY-----LG 195
+ + R +EE + LSR + S FGD Y L
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 196 WLDVVTGLIGRLTASSREVDVLFDQVIE 223
L ++ G+ + S+ ++ +F V++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 63 LSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYG--CQDIG 120
L +++G + + L ++P +V++ RE + H ++RP + +G Q +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 121 FSPYGEYWRQARKTCVLGLLNVILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRR 177
+ YG WR+ R+ V L N+ L + L + EE A C F S R
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGL-------GKKSLEQWVTEEAACLCAAFANHSGR 148
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P GN QL T + + SL +S++YGP+ +HLG +V+ + RE
Sbjct: 10 KLPPGPTPLPFIGNYLQL-NTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIV 151
+ + FS R + + +++ + FS GE +Q R+ I T+ + V
Sbjct: 68 ALVDQAEEFSGRGEQATFD-WVFKGYGVVFS-NGERAKQLRRFS-------IATLRDFGV 118
Query: 152 SRSVLGRRAEEET-----------AGKCNKFGELSRRILVQFVSFSFGDMLPY-----LG 195
+ + R +EE + LSR + S FGD Y L
Sbjct: 119 GKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS 178
Query: 196 WLDVVTGLIGRLTASSREVDVLFDQVIE 223
L ++ G+ + S+ ++ +F V++
Sbjct: 179 LLRMMLGIFQFTSTSTGQLYEMFSSVMK 206
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 63 LSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYG--CQDIG 120
L +++G + + L ++P +V++ RE + H ++RP + +G Q +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 121 FSPYGEYWRQARKTCVLGLLNVILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRR 177
+ YG WR+ R+ V L N+ L + L + EE A C F S R
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGL-------GKKSLEQWVTEEAACLCAAFANHSGR 148
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 33 LPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREI 92
LPP P PI GN+ Q+ S SK YGP+ ++ G +P +V E +E
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDIC--KSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEA 68
Query: 93 IKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIVS 152
+ ++ FS R + + G I S G+ W++ R+ + L N +
Sbjct: 69 LIDNGEEFSGRGNSPISQRITKGLGII--SSNGKRWKEIRRFSLTTLRNF------GMGK 120
Query: 153 RSVLGRRAEE 162
RS+ R EE
Sbjct: 121 RSIEDRVQEE 130
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P GN QL T + + SL +S++YGP+ +HLG +V+ + +E
Sbjct: 10 KLPPGPTPLPFIGNYLQL-NTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGL 139
+ + FS R + + +L+ + FS GE +Q R+ + L
Sbjct: 68 ALVDQAEEFSGRGEQATFD-WLFKGYGVAFS-NGERAKQLRRFSIATL 113
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAR 90
L+LPP P F LH L LP L +L++K GP+ + LG +V++S
Sbjct: 28 LHLPPLVPGF-----LHLL--QPNLPI-HLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIE 79
Query: 91 EIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLL 140
E + + F+ RP+ + + CQDI Y W+ +K LL
Sbjct: 80 EAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALL 129
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P P GN QL T + + SL +S++YGP+ +HLG +V+ + RE
Sbjct: 10 KLPPGPTPLPFIGNYLQL-NTEQM-YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNIV 151
+ + FS R + + +++ + FS GE +Q R+ I T+ + V
Sbjct: 68 ALVDQAEEFSGRGEQATFD-WVFKGYGVVFS-NGERAKQLRRFS-------IATLRDFGV 118
Query: 152 SRSVLGRRAEEETA 165
+ + R +EE
Sbjct: 119 GKRGIEERIQEEAG 132
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 34 PPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREII 93
PP P P+ GN+ Q+ G + SL LSK YGP+ ++ G P +V+ E +E +
Sbjct: 11 PPGPTPLPVIGNILQI-GIKDI-SKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEAL 68
Query: 94 KNHDIVFSNR---PKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLNVILTVSNNI 150
+ FS R P AN I FS G+ W++ R+ ++ L N +
Sbjct: 69 IDLGEEFSGRGIFPLAERANRGF----GIVFS-NGKKWKEIRRFSLMTLRNF------GM 117
Query: 151 VSRSVLGRRAEE 162
RS+ R EE
Sbjct: 118 GKRSIEDRVQEE 129
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 25 STNSIELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVS 84
T+S LPP P P+ GN+ Q+ SL LSK YGP+ ++ G +V+
Sbjct: 4 KTSSGRGKLPPGPTPLPVIGNILQIDIKDV--SKSLTNLSKIYGPVFTLYFGLERMVVLH 61
Query: 85 SAEIAREIIKNHDIVFSNR---PKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN 141
E+ +E + + FS R P AN I FS G+ W++ R+ ++ L N
Sbjct: 62 GYEVVKEALIDLGEEFSGRGHFPLAERANRGF----GIVFS-NGKRWKEIRRFSLMTLRN 116
Query: 142 VILTVSNNIVSRSVLGRRAEE 162
+ RS+ R EE
Sbjct: 117 F------GMGKRSIEDRVQEE 131
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 45 NLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRP 104
N++ L ++ LPH ++ S+ YG + + LG T+V++ ++ +E + + +F++RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 105 KTTAANVFLYGCQDIGF--SPYGEYWRQARKTCV 136
+F+ + G S YG W R+ V
Sbjct: 85 ---CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAV 115
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 45 NLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRP 104
N++ L ++ LPH ++ S+ YG + + LG T+V++ ++ +E + + +F++RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 105 KTTAANVFLYGCQDIGF--SPYGEYWRQARKTCV 136
+F+ + G S YG W R+ V
Sbjct: 85 ---CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAV 115
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIARE 91
LPP P PI GNL Q L +P S L++++GP+ +++G +V+ + +E
Sbjct: 10 KLPPGPFPLPIIGNLFQ-LELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKE 67
Query: 92 IIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN 141
+ ++ FS R A + + + I F+ G W+ R+ + L N
Sbjct: 68 ALLDYKDEFSGRGDLPAFHA--HRDRGIIFN-NGPTWKDIRRFSLTTLRN 114
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 81/223 (36%), Gaps = 45/223 (20%)
Query: 59 SLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYG--- 115
S +KYG + +HLG P +++ E RE + + FS R K + F G
Sbjct: 35 SFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGV 94
Query: 116 ------------------CQDIGFSPYGEYWR-QARKTCVLGLLN-----------VILT 145
+D G R Q C++ L + +
Sbjct: 95 IFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQS 154
Query: 146 VSNNIVSRSVLGRR---AEEETAGKCNKFGELSRRILVQFVSFSFGDMLP-YLGWLDVVT 201
++ NI+ V G+R ++E N F + +S FG + + G+L
Sbjct: 155 ITANIICSIVFGKRFHYQDQEFLKMLNLFYQ-----TFSLISSVFGQLFELFSGFLKHFP 209
Query: 202 GLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVY 244
G ++ + +E++ +EKHR D P +DL+ Y
Sbjct: 210 GAHRQVYKNLQEINAYIGHSVEKHR-ETLDPSAP--RDLIDTY 249
>pdb|3ZVS|B Chain B, Crystal Structure Of Archaemetzincin (Amza) From
Archaeoglobus Fulgidus At 1.4 A Resolution Complexed
With Malonate
Length = 160
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 97 DIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLL 140
+++ ++ PK A VF+ D+ Y RQ TC+L +L
Sbjct: 16 EVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRML 59
>pdb|4AXQ|A Chain A, Crystal Structure Of Archaemetzincin (Amza) From
Archaeoglobus Fulgidus At 1.4 A Resolution
Length = 163
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 97 DIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLL 140
+++ ++ PK A VF+ D+ Y RQ TC+L +L
Sbjct: 19 EVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRML 62
>pdb|3ZVS|A Chain A, Crystal Structure Of Archaemetzincin (Amza) From
Archaeoglobus Fulgidus At 1.4 A Resolution Complexed
With Malonate
pdb|3ZVS|C Chain C, Crystal Structure Of Archaemetzincin (Amza) From
Archaeoglobus Fulgidus At 1.4 A Resolution Complexed
With Malonate
pdb|4A3W|A Chain A, Crystal Structure Of Archaemetzincin (Amza) From
Archaeoglobus Fulgidus At 2.16 A Resolution Complexed
With Citrate
Length = 160
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 97 DIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLL 140
+++ ++ PK A VF+ D+ Y RQ TC+L +L
Sbjct: 16 EVLANSLPKIFNAEVFVLPASDVSLKCYNASRRQYNSTCILRML 59
>pdb|3T2U|A Chain A, Structure Of Wuchereria Bancrofti Pi-Class Glutathione
S-Transferase
pdb|3T2U|B Chain B, Structure Of Wuchereria Bancrofti Pi-Class Glutathione
S-Transferase
Length = 208
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 72 YMHLGYSPTL------VVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYG 125
+ H G P L +V S I R + + H++ N +TT ++F G +D+ + Y
Sbjct: 44 HFHFGQLPCLYDGDHQIVQSGAILRHLARKHNLNGGNELETTHIDMFCEGVRDL-HTKYT 102
Query: 126 EYWRQARKTCVLGLLNVILTVS 147
+ QA T + IL V
Sbjct: 103 KMIYQAYDTEKDSYIKDILPVE 124
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,025,699
Number of Sequences: 62578
Number of extensions: 265795
Number of successful extensions: 690
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 639
Number of HSP's gapped (non-prelim): 37
length of query: 254
length of database: 14,973,337
effective HSP length: 97
effective length of query: 157
effective length of database: 8,903,271
effective search space: 1397813547
effective search space used: 1397813547
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)