Query 037570
Match_columns 254
No_of_seqs 183 out of 1695
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 23:39:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 2.8E-30 9.5E-35 212.4 19.3 213 29-248 5-252 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 4.1E-29 1.4E-33 206.1 17.7 212 29-247 6-259 (507)
3 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.8E-27 6.2E-32 194.8 19.6 208 29-248 7-252 (476)
4 2hi4_A Cytochrome P450 1A2; CY 100.0 2.2E-27 7.5E-32 195.2 19.9 208 30-247 14-266 (495)
5 3qz1_A Steroid 21-hydroxylase; 100.0 1E-28 3.4E-33 203.2 11.3 204 29-249 26-264 (496)
6 3tbg_A Cytochrome P450 2D6; mo 100.0 5.5E-27 1.9E-31 192.1 20.4 208 31-246 9-255 (479)
7 3czh_A Cytochrome P450 2R1; vi 99.9 1.1E-26 3.6E-31 190.5 18.7 210 30-248 10-258 (481)
8 2fdv_A Cytochrome P450 2A6; CY 99.9 3.4E-26 1.2E-30 187.2 18.5 207 31-248 9-253 (476)
9 1po5_A Cytochrome P450 2B4; ox 99.9 6.1E-26 2.1E-30 185.8 18.6 206 31-247 9-252 (476)
10 3k9v_A 1,25-dihydroxyvitamin D 99.9 5.9E-26 2E-30 186.0 15.6 209 29-247 21-276 (482)
11 3s79_A Cytochrome P450 19A1; o 99.9 3.7E-26 1.3E-30 188.2 14.0 209 30-251 43-289 (503)
12 1r9o_A Cytochrome P450 2C9; mo 99.9 1E-25 3.5E-30 184.5 16.3 206 31-247 10-253 (477)
13 3nxu_A Cytochrome P450 3A4; al 99.9 4.3E-27 1.5E-31 193.0 8.2 208 30-249 12-258 (485)
14 3gw9_A Sterol 14alpha-demethyl 99.9 4.9E-26 1.7E-30 185.0 13.0 208 31-250 2-244 (450)
15 3ld6_A Lanosterol 14-alpha dem 99.9 2E-26 6.8E-31 187.9 10.4 204 31-252 10-245 (461)
16 2ij2_A Cytochrome P450 BM3; mo 99.9 4E-24 1.4E-28 174.7 16.9 204 32-249 3-242 (470)
17 2cib_A Cytochrome P450 51; hem 99.9 2.4E-23 8.2E-28 169.4 15.8 199 32-249 4-234 (455)
18 3i3k_A Lanosterol 14-alpha dem 99.9 8E-24 2.7E-28 172.5 11.9 203 29-250 8-243 (461)
19 3dbg_A Putative cytochrome P45 99.9 5.7E-24 1.9E-28 173.7 9.1 199 31-250 22-254 (467)
20 2ve3_A Putative cytochrome P45 99.9 6.2E-23 2.1E-27 166.5 14.1 194 29-249 9-233 (444)
21 3n9y_A Cholesterol SIDE-chain 99.9 5.5E-23 1.9E-27 168.7 12.4 211 29-247 6-268 (487)
22 3v8d_A Cholesterol 7-alpha-mon 99.8 7.2E-22 2.5E-26 162.2 5.8 198 29-249 10-248 (491)
23 3mdm_A Cholesterol 24-hydroxyl 99.8 8E-20 2.7E-24 148.7 14.3 187 54-248 10-235 (456)
24 2cd8_A Cytochrome P450 monooxy 99.8 4.4E-20 1.5E-24 149.3 9.4 179 31-249 25-242 (436)
25 1izo_A P450bsbeta, cytochrome 99.8 6.9E-19 2.4E-23 141.6 15.9 183 39-250 7-223 (417)
26 3awm_A Fatty acid alpha-hydrox 99.8 1.6E-18 5.5E-23 139.4 15.4 185 34-250 4-222 (415)
27 1n97_A CYP175A1; electron tran 99.7 3.9E-19 1.3E-23 141.8 3.8 169 35-225 2-201 (389)
28 3dax_A Cytochrome P450 7A1; ch 99.7 8.2E-19 2.8E-23 144.0 5.7 106 29-141 10-118 (491)
29 3b6h_A Prostacyclin synthase; 99.7 1.7E-18 5.9E-23 142.4 7.3 96 29-130 15-112 (498)
30 1jfb_A Nitric-oxide reductase 99.7 8.4E-17 2.9E-21 128.9 14.5 177 33-248 2-219 (404)
31 1ued_A P450 OXYC, P450 monooxy 99.7 5.4E-17 1.8E-21 130.1 12.1 176 29-248 7-226 (406)
32 2zbx_A Cytochrome P450-SU1; be 99.7 2.4E-16 8.3E-21 126.5 14.6 179 31-249 4-224 (412)
33 1cpt_A Cytochrome P450-TERP; o 99.7 8.5E-17 2.9E-21 129.8 10.1 195 30-249 4-247 (428)
34 3b98_A Prostaglandin I2 syntha 99.7 2.6E-17 9E-22 134.5 5.7 102 30-141 16-119 (475)
35 1s1f_A Putative cytochrome P45 99.7 2.9E-16 1E-20 125.8 11.4 176 31-248 7-222 (406)
36 2zwu_A Camphor 5-monooxygenase 99.7 9.8E-16 3.4E-20 123.0 13.8 181 29-248 8-228 (415)
37 2jjn_A Cytochrome P450 113A1; 99.7 5.3E-16 1.8E-20 124.5 11.7 176 29-249 16-221 (411)
38 4fb2_A P450CIN; heme, monooxyg 99.7 1.1E-15 3.6E-20 122.3 12.3 161 54-250 19-213 (398)
39 3oo3_A OXY protein; cytochrome 99.7 1.4E-15 4.9E-20 121.0 13.0 159 54-247 12-206 (384)
40 3ejb_B Biotin biosynthesis cyt 99.6 3E-15 1E-19 119.9 14.3 163 54-245 13-211 (404)
41 3dsk_A Cytochrome P450 74A, ch 99.6 3.2E-15 1.1E-19 122.9 13.7 131 29-163 25-206 (495)
42 3ivy_A Cytochrome P450 CYP125; 99.6 6E-16 2.1E-20 125.0 8.8 184 32-250 18-249 (433)
43 2wm5_A CYP124, putative cytoch 99.6 4.3E-15 1.5E-19 120.0 13.0 165 55-249 45-254 (435)
44 3aba_A Cytochrome P450; oxidor 99.6 1.1E-14 3.7E-19 116.6 15.0 160 54-249 19-217 (403)
45 3tyw_A Putative cytochrome P45 99.6 1E-14 3.5E-19 117.2 14.0 161 54-250 29-230 (417)
46 3tkt_A Cytochrome P450; aromat 99.6 1.9E-15 6.5E-20 122.6 9.8 174 56-249 47-269 (450)
47 3lxh_A Cytochrome P450; heme, 99.6 1.7E-14 5.7E-19 116.2 13.9 166 54-249 38-236 (421)
48 3a4g_A Vitamin D hydroxylase; 99.6 7.7E-15 2.6E-19 117.7 11.7 159 54-249 20-215 (411)
49 3abb_A CYP105D6, cytochrome P4 99.6 3.4E-15 1.1E-19 119.8 9.4 158 54-248 24-222 (408)
50 2xkr_A CYP142, putative cytoch 99.6 1.8E-14 6.2E-19 115.1 13.3 161 54-249 18-210 (398)
51 1z8o_A 6-deoxyerythronolide B 99.6 2.5E-14 8.5E-19 114.6 14.0 159 54-247 14-218 (404)
52 2y5n_A MYCG, P-450-like protei 99.6 1.7E-14 5.9E-19 115.9 12.7 161 54-249 37-234 (417)
53 1q5d_A P450 epoxidase; cytochr 99.6 6.9E-15 2.4E-19 118.3 10.2 166 54-248 26-233 (419)
54 3nc3_A Cytochrome P450 CYPX; c 99.6 4.3E-14 1.5E-18 114.4 13.6 165 54-249 53-249 (441)
55 2z3t_A Cytochrome P450; monoxy 99.6 2.4E-14 8.2E-19 115.4 11.7 167 54-249 20-234 (425)
56 3r9b_A Cytochrome P450 164A2; 99.5 2.7E-14 9.3E-19 114.9 10.9 168 54-248 29-235 (418)
57 2z36_A MOXA, cytochrome P450 t 99.5 3.3E-14 1.1E-18 114.1 11.3 174 31-248 6-224 (413)
58 3dan_A Cytochrome P450 74A2; A 99.5 6.3E-14 2.2E-18 114.5 12.6 130 29-162 6-187 (473)
59 3oft_A Cytochrome P450, CYP101 99.5 4.2E-14 1.5E-18 112.9 10.0 160 54-250 24-215 (396)
60 3buj_A CALO2; heme, iron, meta 99.5 5.6E-14 1.9E-18 112.2 10.5 162 54-248 13-213 (397)
61 1odo_A Putative cytochrome P45 99.5 3.4E-14 1.2E-18 113.9 8.9 160 54-249 15-219 (408)
62 2dkk_A Cytochrome P450; CYP158 99.5 4.2E-14 1.4E-18 113.4 8.0 158 54-247 27-224 (411)
63 2xbk_A PIMD protein; epoxidati 99.5 3.5E-13 1.2E-17 107.8 13.3 153 54-244 26-221 (404)
64 1gwi_A CYP154C1, cytochrome P4 99.5 3.4E-13 1.2E-17 108.1 13.0 160 54-249 17-222 (411)
65 2uuq_A CYP130, cytochrome P450 99.5 1.6E-13 5.6E-18 110.1 10.8 161 54-249 25-228 (414)
66 3mgx_A Putative P450 monooxyge 99.4 2.8E-13 9.4E-18 108.8 9.2 162 54-247 37-236 (415)
67 1lfk_A OXYB, P450 monooxygenas 99.4 5.7E-13 2E-17 106.5 9.0 154 60-248 19-217 (398)
68 3rwl_A Cytochrome P450 alkane 99.4 1E-11 3.5E-16 100.0 14.8 170 54-252 38-249 (426)
69 3b4x_A 367AA long hypothetical 99.3 8.3E-12 2.9E-16 98.6 8.4 154 57-247 2-193 (367)
70 1n40_A P450 MT2, cytochrome P4 99.3 1.1E-11 3.9E-16 98.9 9.2 155 54-248 16-210 (396)
71 2wiy_A XPLA-heme, cytochrome P 99.3 4.4E-11 1.5E-15 95.4 11.9 164 54-249 20-214 (394)
72 3p3o_A Cytochrome P450; monoox 99.3 5.4E-12 1.9E-16 101.3 6.7 165 54-250 33-235 (416)
73 2rfb_A Cytochrome P450; heme, 99.2 9.5E-11 3.3E-15 91.7 9.6 86 65-161 2-116 (343)
74 1io7_A Cytochrome P450 CYP119; 99.1 8.6E-11 3E-15 92.8 7.4 150 57-247 2-192 (368)
75 4dnj_A Putative cytochrome P45 98.6 1.3E-06 4.5E-11 69.9 13.4 96 38-141 18-120 (412)
76 4dxy_A Cytochrome P450, CYP101 98.5 1.4E-06 4.9E-11 69.8 12.3 85 54-141 37-122 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 95.3 0.0035 1.2E-07 49.5 0.5 117 33-162 35-181 (381)
78 1s79_A Lupus LA protein; RRM, 81.4 5.8 0.0002 24.4 6.0 52 41-97 14-73 (103)
79 2diu_A KIAA0430 protein; struc 74.5 12 0.00041 22.8 5.6 63 41-105 12-76 (96)
80 3d2w_A TAR DNA-binding protein 74.2 8.5 0.00029 22.7 5.1 52 36-92 9-64 (89)
81 1iqt_A AUF1, heterogeneous nuc 73.2 7.4 0.00025 21.8 4.5 42 56-97 12-62 (75)
82 3lqv_A PRE-mRNA branch site pr 73.0 14 0.00048 22.8 7.8 57 34-95 4-66 (115)
83 2krb_A Eukaryotic translation 72.8 11 0.00038 21.5 5.9 39 57-95 21-66 (81)
84 2mss_A Protein (musashi1); RNA 70.8 10 0.00034 21.2 4.7 42 56-97 12-62 (75)
85 3ctr_A Poly(A)-specific ribonu 65.4 4.9 0.00017 24.6 2.5 40 56-95 18-58 (101)
86 1whv_A Poly(A)-specific ribonu 63.2 11 0.00038 23.0 3.8 41 55-95 27-68 (100)
87 2wbr_A GW182, gawky, LD47780P; 62.6 22 0.00076 21.2 6.0 51 40-95 9-62 (89)
88 3beg_B Splicing factor, argini 62.3 25 0.00086 21.8 7.1 57 41-102 19-78 (115)
89 1sjq_A Polypyrimidine tract-bi 60.7 27 0.00092 21.6 6.5 56 35-95 13-71 (105)
90 4f25_A Polyadenylate-binding p 59.4 26 0.00088 21.7 5.4 50 41-95 8-64 (115)
91 4fxv_A ELAV-like protein 1; RN 57.2 29 0.00099 20.8 5.3 49 42-95 23-80 (99)
92 3s8s_A Histone-lysine N-methyl 57.2 31 0.0011 21.2 5.4 50 41-95 9-67 (110)
93 2cqc_A Arginine/serine-rich sp 56.4 28 0.00095 20.4 6.1 51 40-95 17-76 (95)
94 1x4c_A Splicing factor, argini 56.1 32 0.0011 20.9 7.2 50 41-95 18-69 (108)
95 2nlw_A Eukaryotic translation 55.9 31 0.0011 20.8 6.0 53 40-95 17-80 (105)
96 1whx_A Hypothetical protein ri 54.8 34 0.0012 21.0 6.0 50 55-104 22-75 (111)
97 1x4d_A Matrin 3; structural ge 54.5 32 0.0011 21.0 5.0 56 36-95 13-71 (102)
98 2dnh_A Bruno-like 5, RNA bindi 54.2 30 0.001 20.7 5.0 50 41-95 18-75 (105)
99 1sjr_A Polypyrimidine tract-bi 52.3 52 0.0018 22.3 6.4 48 43-95 51-103 (164)
100 1x4e_A RNA binding motif, sing 52.1 30 0.001 19.7 4.6 49 41-94 8-65 (85)
101 2jvr_A Nucleolar protein 3; RN 51.1 42 0.0014 20.8 5.5 50 41-95 31-86 (111)
102 2ad9_A Polypyrimidine tract-bi 51.0 44 0.0015 21.1 5.6 50 40-94 33-85 (119)
103 1oo0_B CG8781-PA, drosophila Y 50.4 40 0.0014 20.4 6.0 40 56-95 39-87 (110)
104 1p27_B RNA-binding protein 8A; 49.7 40 0.0014 20.2 6.3 40 56-95 36-84 (106)
105 3s7r_A Heterogeneous nuclear r 49.5 28 0.00097 20.0 4.2 51 41-96 14-73 (87)
106 2hvz_A Splicing factor, argini 49.1 40 0.0014 20.0 5.4 48 56-103 13-65 (101)
107 1rk8_A CG8781-PA, CG8781-PA pr 48.3 53 0.0018 21.8 5.9 40 56-95 85-133 (165)
108 2d9o_A DNAJ (HSP40) homolog, s 48.2 44 0.0015 20.3 6.0 40 56-95 30-73 (100)
109 1whw_A Hypothetical protein ri 48.0 41 0.0014 19.9 5.9 50 41-95 11-69 (99)
110 2fy1_A RNA-binding motif prote 47.4 44 0.0015 20.7 5.0 57 41-102 10-75 (116)
111 2cq4_A RNA binding motif prote 46.4 34 0.0012 21.0 4.4 42 56-97 38-88 (114)
112 2ywk_A Putative RNA-binding pr 45.5 44 0.0015 19.5 4.9 50 41-95 19-76 (95)
113 2dnz_A Probable RNA-binding pr 45.4 44 0.0015 19.5 7.1 58 41-103 8-75 (95)
114 3tyt_A Heterogeneous nuclear r 45.3 57 0.0019 22.8 5.8 51 41-95 7-61 (205)
115 2cq1_A PTB-like protein L; RRM 45.2 49 0.0017 20.0 5.2 50 40-94 17-69 (101)
116 1x4g_A Nucleolysin TIAR; struc 44.7 51 0.0017 20.0 6.0 49 42-95 29-80 (109)
117 1uaw_A Mouse-musashi-1; RNP-ty 43.8 38 0.0013 18.7 4.0 42 56-97 13-63 (77)
118 2cqd_A RNA-binding region cont 43.8 54 0.0019 20.1 5.3 53 41-98 20-81 (116)
119 1u6f_A Tcubp1, RNA-binding pro 43.4 61 0.0021 20.6 5.4 40 56-95 55-103 (139)
120 2dgv_A HnRNP M, heterogeneous 43.1 47 0.0016 19.2 6.1 50 41-95 11-67 (92)
121 1p1t_A Cleavage stimulation fa 42.7 52 0.0018 19.6 5.2 40 56-95 21-69 (104)
122 2a3j_A U1 small nuclear ribonu 42.6 64 0.0022 20.5 5.5 37 59-95 49-91 (127)
123 2kxn_B Transformer-2 protein h 42.5 63 0.0022 20.5 8.3 51 40-95 48-107 (129)
124 2do4_A Squamous cell carcinoma 42.3 52 0.0018 19.4 6.5 51 40-95 19-77 (100)
125 2cqi_A Nucleolysin TIAR; RNA r 41.8 54 0.0019 19.5 5.9 49 41-94 18-73 (103)
126 2rs2_A Musashi-1, RNA-binding 41.7 58 0.002 19.8 5.5 51 41-96 28-87 (109)
127 3ucg_A Polyadenylate-binding p 41.7 45 0.0015 19.1 4.2 42 56-97 19-69 (89)
128 3ex7_B RNA-binding protein 8A; 41.4 63 0.0022 20.1 6.4 48 56-103 35-92 (126)
129 2pe8_A Splicing factor 45; RRM 41.3 59 0.002 19.8 4.8 67 36-102 6-83 (105)
130 2cpi_A CCR4-NOT transcription 41.3 31 0.0011 21.2 3.5 56 40-100 17-88 (111)
131 1wf0_A TDP-43, TAR DNA-binding 40.7 35 0.0012 19.6 3.6 46 42-92 9-58 (88)
132 2e5h_A Zinc finger CCHC-type a 40.4 53 0.0018 19.0 6.9 51 40-95 18-77 (94)
133 2la6_A RNA-binding protein FUS 40.1 57 0.0019 19.2 6.6 51 40-95 15-82 (99)
134 3md1_A Nuclear and cytoplasmic 40.0 50 0.0017 18.5 4.9 40 56-95 14-62 (83)
135 2cq3_A RNA-binding protein 9; 39.9 59 0.002 19.3 6.9 50 41-95 18-74 (103)
136 2voo_A Lupus LA protein; RNA-b 39.6 40 0.0014 23.3 4.2 42 55-96 121-170 (193)
137 2jvo_A Nucleolar protein 3; nu 39.4 64 0.0022 19.6 5.3 40 56-95 44-84 (108)
138 2cqb_A Peptidyl-prolyl CIS-tra 39.2 60 0.002 19.2 5.4 52 39-95 13-73 (102)
139 3bs9_A Nucleolysin TIA-1 isofo 39.1 53 0.0018 18.6 5.3 49 42-95 10-67 (87)
140 2adc_A Polypyrimidine tract-bi 38.7 1E+02 0.0035 21.7 6.9 59 41-103 37-100 (229)
141 3v4m_A Splicing factor U2AF 65 38.5 66 0.0023 19.5 5.5 45 58-102 30-86 (105)
142 2bz2_A Negative elongation fac 38.5 72 0.0025 19.9 5.3 45 56-100 50-98 (121)
143 3md3_A Nuclear and cytoplasmic 38.4 68 0.0023 20.8 5.2 40 56-95 13-60 (166)
144 3mdf_A Peptidyl-prolyl CIS-tra 38.3 54 0.0019 18.5 6.5 51 40-95 9-68 (85)
145 1x4h_A RNA-binding protein 28; 38.0 66 0.0022 19.4 7.6 52 40-96 17-77 (111)
146 1x4f_A Matrin 3; structural ge 38.0 62 0.0021 20.1 4.5 51 40-94 27-80 (112)
147 2dgs_A DAZ-associated protein 37.9 62 0.0021 19.0 7.5 58 41-103 13-79 (99)
148 2dit_A HIV TAT specific factor 37.8 63 0.0022 19.7 4.6 38 58-95 41-83 (112)
149 2dnm_A SRP46 splicing factor; 37.7 64 0.0022 19.1 6.4 56 41-101 16-81 (103)
150 1nu4_A U1A RNA binding domain; 37.5 62 0.0021 18.9 5.6 50 41-95 11-70 (97)
151 2dhg_A TRNA selenocysteine ass 37.4 65 0.0022 19.1 6.6 55 36-95 7-70 (104)
152 2err_A Ataxin-2-binding protei 37.1 41 0.0014 20.5 3.6 40 56-95 42-88 (109)
153 3ns6_A Eukaryotic translation 36.7 67 0.0023 19.1 5.4 38 58-95 27-73 (100)
154 2qfj_A FBP-interacting repress 36.2 1E+02 0.0035 21.1 7.0 40 56-95 41-89 (216)
155 1h2v_Z 20 kDa nuclear CAP bind 36.1 88 0.003 20.4 5.4 50 41-95 42-100 (156)
156 1x4b_A Heterogeneous nuclear r 36.1 43 0.0015 20.5 3.7 40 56-95 40-88 (116)
157 1l3k_A Heterogeneous nuclear r 35.5 67 0.0023 21.7 4.9 52 41-97 16-76 (196)
158 2cpf_A RNA binding motif prote 35.1 69 0.0024 18.7 6.1 50 41-95 8-69 (98)
159 2dis_A Unnamed protein product 34.9 74 0.0025 19.1 5.7 50 41-95 11-71 (109)
160 2cpj_A Non-POU domain-containi 34.7 71 0.0024 18.8 4.7 50 41-95 18-70 (99)
161 2jrs_A RNA-binding protein 39; 34.6 77 0.0026 19.2 6.4 50 41-95 29-87 (108)
162 2cq0_A Eukaryotic translation 34.6 48 0.0017 19.7 3.6 50 41-95 18-76 (103)
163 2la4_A Nuclear and cytoplasmic 34.5 72 0.0025 18.8 5.4 40 56-95 40-82 (101)
164 2div_A TRNA selenocysteine ass 34.5 71 0.0024 18.7 5.5 51 40-95 11-71 (99)
165 3r27_A HnRNP L, heterogeneous 34.4 79 0.0027 19.2 6.4 52 39-95 22-76 (100)
166 2d9p_A Polyadenylate-binding p 34.3 74 0.0025 18.9 6.7 57 39-100 16-80 (103)
167 4f02_A Polyadenylate-binding p 34.3 85 0.0029 21.8 5.3 51 40-95 17-76 (213)
168 1x5p_A Negative elongation fac 34.1 72 0.0025 18.7 6.7 40 56-95 26-68 (97)
169 3ulh_A THO complex subunit 4; 33.7 77 0.0026 18.9 5.6 40 56-95 42-89 (107)
170 2jwn_A Embryonic polyadenylate 33.5 66 0.0023 19.9 4.3 39 56-94 49-96 (124)
171 2khc_A Testis-specific RNP-typ 33.5 54 0.0018 20.1 3.8 40 56-95 53-101 (118)
172 1ghh_A DINI, DNA-damage-induci 33.3 74 0.0025 18.6 4.8 38 58-95 24-69 (81)
173 2dgx_A KIAA0430 protein; RRM d 33.1 76 0.0026 18.6 5.8 50 41-95 12-71 (96)
174 2x1f_A MRNA 3'-END-processing 33.0 75 0.0026 18.5 6.1 40 56-95 15-63 (96)
175 1wi8_A EIF-4B, eukaryotic tran 32.8 80 0.0027 18.8 5.5 52 40-97 17-78 (104)
176 4a8x_A RNA-binding protein wit 32.7 70 0.0024 18.1 5.9 40 56-95 17-66 (88)
177 1b7f_A Protein (SXL-lethal pro 32.3 1E+02 0.0036 20.0 5.9 40 56-95 16-64 (168)
178 3n9u_C Cleavage and polyadenyl 32.2 1.1E+02 0.0037 20.2 5.4 40 56-95 68-118 (156)
179 2f3j_A RNA and export factor b 31.9 1.2E+02 0.0041 20.5 6.3 40 56-95 101-148 (177)
180 3pgw_S U1-70K; protein-RNA com 31.5 1.1E+02 0.0037 24.5 6.0 51 40-95 104-163 (437)
181 1x5u_A Splicing factor 3B subu 31.1 85 0.0029 18.6 8.2 50 41-95 18-76 (105)
182 1wg5_A Heterogeneous nuclear r 31.0 87 0.003 18.7 6.1 58 41-103 18-84 (104)
183 1wex_A Hypothetical protein (r 30.9 91 0.0031 18.9 6.8 51 40-95 17-70 (104)
184 1fxl_A Paraneoplastic encephal 30.9 1.1E+02 0.0037 19.8 5.7 40 56-95 15-63 (167)
185 2dh8_A DAZ-associated protein 30.5 88 0.003 18.6 5.5 52 41-97 19-79 (105)
186 3zzy_A Polypyrimidine tract-bi 30.0 94 0.0032 20.0 4.4 49 42-95 32-85 (130)
187 2ku7_A MLL1 PHD3-CYP33 RRM chi 29.9 1.1E+02 0.0036 19.3 7.2 40 56-95 76-124 (140)
188 3tht_A Alkylated DNA repair pr 28.6 2E+02 0.0069 22.1 6.9 57 35-95 15-75 (345)
189 2xnq_A Nuclear polyadenylated 27.8 97 0.0033 18.2 6.5 40 56-95 36-76 (97)
190 2ytc_A PRE-mRNA-splicing facto 26.9 90 0.0031 17.5 7.2 50 41-95 15-67 (85)
191 1x5o_A RNA binding motif, sing 26.7 92 0.0031 18.9 4.0 50 41-95 28-85 (114)
192 2cjk_A Nuclear polyadenylated 26.4 1E+02 0.0034 20.1 4.4 41 56-96 100-149 (167)
193 2dnr_A Synaptojanin-1; RRM dom 26.4 1.1E+02 0.0037 18.3 4.3 41 58-98 30-71 (91)
194 2j76_E EIF-4B, EIF4B, eukaryot 26.2 1.1E+02 0.0036 18.1 5.0 44 56-100 32-85 (100)
195 2ghp_A U4/U6 snRNA-associated 26.1 99 0.0034 22.7 4.7 57 40-101 43-106 (292)
196 2dnq_A RNA-binding protein 4B; 26.1 98 0.0034 17.7 6.4 50 41-95 11-61 (90)
197 1x5s_A Cold-inducible RNA-bind 25.7 1.1E+02 0.0037 18.0 8.0 58 40-102 14-81 (102)
198 2dgt_A RNA-binding protein 30; 25.4 1E+02 0.0035 17.7 6.2 50 41-95 13-63 (92)
199 2dnp_A RNA-binding protein 14; 25.4 1E+02 0.0035 17.6 7.4 51 40-95 11-62 (90)
200 2i2y_A Fusion protein consists 25.4 1.4E+02 0.0048 19.2 8.5 50 41-95 76-129 (150)
201 3p5t_L Cleavage and polyadenyl 24.9 1.1E+02 0.0036 17.6 4.3 40 56-95 14-64 (90)
202 2kvi_A Nuclear polyadenylated 24.6 1.1E+02 0.0038 17.8 5.7 56 41-100 13-70 (96)
203 1b35_D CRPV, protein (cricket 24.6 50 0.0017 17.0 1.9 11 39-49 30-40 (57)
204 2xs2_A Deleted in azoospermia- 24.5 44 0.0015 19.9 2.1 39 56-94 22-68 (102)
205 1x5t_A Splicing factor 3B subu 24.4 1.1E+02 0.0037 17.7 4.4 50 41-95 8-67 (96)
206 1why_A Hypothetical protein ri 24.4 1.1E+02 0.0038 17.8 7.7 51 40-95 19-72 (97)
207 2lxi_A RNA-binding protein 10; 24.2 97 0.0033 18.0 3.6 40 56-95 14-63 (91)
208 1x4a_A Splicing factor, argini 23.5 1.3E+02 0.0043 18.0 7.4 50 41-95 25-80 (109)
209 1jmt_A Splicing factor U2AF 35 23.3 1.3E+02 0.0044 18.1 5.2 36 60-95 43-87 (104)
210 2hgn_A Heterogeneous nuclear r 22.8 1.6E+02 0.0055 19.0 5.0 57 41-103 49-113 (139)
211 2dgp_A Bruno-like 4, RNA bindi 22.4 1.3E+02 0.0044 17.8 6.5 50 41-95 16-74 (106)
212 1wf1_A RNA-binding protein RAL 22.4 1.3E+02 0.0046 18.0 5.9 41 55-95 40-81 (110)
213 3s6e_A RNA-binding protein 39; 22.4 1.5E+02 0.005 18.4 4.6 70 34-103 3-83 (114)
214 1dp3_A TRAM protein; helix-loo 22.4 99 0.0034 16.4 3.0 33 214-246 11-43 (55)
215 3ue2_A Poly(U)-binding-splicin 22.1 1.5E+02 0.0052 18.4 4.8 65 39-103 21-99 (118)
216 2cpd_A Apobec-1 stimulating pr 22.1 1.3E+02 0.0044 17.6 6.1 50 41-95 18-70 (99)
217 4gyx_A Type III collagen fragm 21.7 51 0.0017 14.4 1.3 9 33-41 4-12 (31)
218 2dha_A FLJ20171 protein; RRM d 21.7 85 0.0029 19.8 3.1 51 41-96 26-88 (123)
219 3trk_A Nonstructural polyprote 21.4 78 0.0027 23.6 3.0 41 117-163 23-66 (324)
220 2cq2_A Hypothetical protein LO 21.4 1.6E+02 0.0054 18.4 7.2 40 56-95 40-82 (114)
221 3fgx_A Rbstp2171; structural g 21.3 72 0.0025 20.0 2.5 16 60-75 10-25 (114)
222 2hzc_A Splicing factor U2AF 65 21.2 1.2E+02 0.0041 17.0 5.4 48 42-94 10-71 (87)
223 1qm9_A Polypyrimidine tract-bi 21.2 2E+02 0.0067 19.4 5.5 47 57-103 18-69 (198)
224 2ki2_A SS-DNA binding protein 21.2 98 0.0033 17.6 3.2 39 56-95 14-61 (90)
225 2kn4_A Immunoglobulin G-bindin 21.0 1.8E+02 0.0061 18.8 7.6 50 41-95 73-131 (158)
226 2cph_A RNA binding motif prote 20.8 1.4E+02 0.0048 17.6 8.6 57 41-102 18-86 (107)
227 2dng_A Eukaryotic translation 20.6 1.4E+02 0.0048 17.5 4.3 52 40-97 17-77 (103)
228 2cpz_A CUG triplet repeat RNA- 20.5 1.5E+02 0.0052 17.9 6.5 50 41-95 28-86 (115)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.97 E-value=2.8e-30 Score=212.40 Aligned_cols=213 Identities=18% Similarity=0.321 Sum_probs=162.0
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
+..+.||||+++|++||++.+ ...+.++..+.+|+++||++|++++|+.++|+|+||+++++|+.+++..|++++....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l-~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFL-PRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp -------CCBCCCEEEEESSC-TTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCeEcchHHh-CCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 346689999999999999988 3113567889999999999999999999999999999999999999889998887665
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHH
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSR 153 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~ 153 (254)
.......+.|++++++|+.|+++||++.++|+. .+..+++|+|+.
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~~ 163 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISL 163 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHH
Confidence 555544567888887799999999999999852 678899999999
Q ss_pred HHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 037570 154 SVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDD 233 (254)
Q Consensus 154 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 233 (254)
++||.+++.. ++....+.+..+.+........+.+++|++.+++. ...++.++..+.+.++++++++++++..+.
T Consensus 164 ~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 238 (494)
T 3swz_A 164 ICFNTSYKNG-DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN--KTLEKLKSHVKIRNDLLNKILENYKEKFRS-- 238 (494)
T ss_dssp HHHSCCCCTT-CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC--SHHHHHHHHHHHHHHHHHHHHHHHTTTCCT--
T ss_pred HHcCCcCCCC-CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence 9999998754 33333334444444444444455677888877652 345667778888899999999988776543
Q ss_pred CCCCccHHHHhhccc
Q 037570 234 HPNRKDLVHVYSNFK 248 (254)
Q Consensus 234 ~~~~~d~l~~ll~~~ 248 (254)
+...|+++.|+++.
T Consensus 239 -~~~~d~l~~ll~~~ 252 (494)
T 3swz_A 239 -DSITNMLDTLMQAK 252 (494)
T ss_dssp -TCCCSHHHHHHHHH
T ss_pred -cchhHHHHHHHHHH
Confidence 45679999999753
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=206.06 Aligned_cols=212 Identities=19% Similarity=0.346 Sum_probs=147.1
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
++.+.||||+++|++||++.+ . ++++..+.+|+++||++|++++|+.++|+|+||+++++|+.+++..|.+++....
T Consensus 6 ~~~~~pPgP~~~P~iG~~~~~-~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~ 82 (507)
T 3pm0_A 6 SSKGKPPGPFAWPLIGNAAAV-G--QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFAS 82 (507)
T ss_dssp -------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHH
T ss_pred CCCCCCcCCCCCCeeCchhhc-C--ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchH
Confidence 346789999999999999988 6 7889999999999999999999999999999999999999888888888876655
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------------HHHHHH
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------------VILTVS 147 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------------~~~~~~ 147 (254)
..... .+.|++++.+|+.|+++|+++.+.|.. .+.+++
T Consensus 83 ~~~~~-~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~ 161 (507)
T 3pm0_A 83 FRVVS-GGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV 161 (507)
T ss_dssp HHHGG-GGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred HHhhc-CCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence 44433 467887776699999999999987642 789999
Q ss_pred HHHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhh-hccHHHHHHHHHHHHHHHHHHHHHHHH
Q 037570 148 NNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDV-VTGLIGRLTASSREVDVLFDQVIEKHR 226 (254)
Q Consensus 148 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~ 226 (254)
+|+++.++||.+++.. ++....+.+.+..+........+...+|++.+++. +....++..+..+.+.+++.+.|++++
T Consensus 162 ~dvi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 240 (507)
T 3pm0_A 162 ANVMSAVCFGCRYSHD-DPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHC 240 (507)
T ss_dssp HHHHHHHHTSCCCCTT-CHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccccCCCC-CHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999765 33334444455555554444444566787776642 112456777888889999999999988
Q ss_pred hcCCCCCCCCCccHHHHhhcc
Q 037570 227 ISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 227 ~~~~~~~~~~~~d~l~~ll~~ 247 (254)
+..+. ++.+.|+++.|++.
T Consensus 241 ~~~~~--~~~~~d~l~~ll~~ 259 (507)
T 3pm0_A 241 ESLRP--GAAPRDMMDAFILS 259 (507)
T ss_dssp HHCCT--TCCCCSHHHHHHHH
T ss_pred hcccc--ccCCccHHHHHHHH
Confidence 76543 24568999999964
No 3
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.96 E-value=1.8e-27 Score=194.76 Aligned_cols=208 Identities=21% Similarity=0.280 Sum_probs=157.5
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
++.+.||||+++|++||++.+.. .+++..+.+|+++||++|++++|+.++|+++||+.+++|+.++...|.+++....
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~ 84 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLEL--KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA 84 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGG
T ss_pred CCCCCCcCCCCcccccChhhhcc--ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCch
Confidence 44678999999999999998844 6788999999999999999999999999999999999999988778877766554
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHH
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSR 153 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~ 153 (254)
..... +.|+++++ |+.|+++|+++.+.|.. .+..+++|+|++
T Consensus 85 ~~~~~--~~~l~~~~-g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~ 161 (476)
T 3e6i_A 85 FHAHR--DRGIIFNN-GPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIAD 161 (476)
T ss_dssp GGGGT--TSSSTTCC-STTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHH
T ss_pred hheec--CCCEEecC-CcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHH
Confidence 44443 23888887 99999999999888752 778899999999
Q ss_pred HHhcccccccchhhhhHHHHHHHHHHHhcccCC--cccccc-ccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037570 154 SVLGRRAEEETAGKCNKFGELSRRILVQFVSFS--FGDMLP-YLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGS 230 (254)
Q Consensus 154 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 230 (254)
++||.+++.. ++....+.+.+...+....... +...+| ++.++ +...++..+..+.+.+++.+.|+++++..+
T Consensus 162 ~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l---p~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 237 (476)
T 3e6i_A 162 ILFRKHFDYN-DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL---PGSHRKVIKNVAEVKEYVSERVKEHHQSLD 237 (476)
T ss_dssp HHHSCCCCTT-CHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTS---CSHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHcCCCCCCC-CHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999865 3333445555555444332211 123344 33333 344566778888999999999999988755
Q ss_pred CCCCCCCccHHHHhhccc
Q 037570 231 DDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 231 ~~~~~~~~d~l~~ll~~~ 248 (254)
. +.++|+++.|+.+.
T Consensus 238 ~---~~~~d~~~~ll~~~ 252 (476)
T 3e6i_A 238 P---NCPRDLTDCLLVEM 252 (476)
T ss_dssp T---TSCCSHHHHHHHHH
T ss_pred C---CCCccHHHHHHHHH
Confidence 4 34679999999753
No 4
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.2e-27 Score=195.19 Aligned_cols=208 Identities=20% Similarity=0.348 Sum_probs=156.3
Q ss_pred CCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchh
Q 037570 30 ELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAA 109 (254)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~ 109 (254)
+.+.+|||+++|++||++.+ . ++++..+.+|+++||+||++++|+.++++++||+++++|+.++...|.+++.....
T Consensus 14 ~lp~~PgP~~~p~~G~~~~~-~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~ 90 (495)
T 2hi4_A 14 GLKSPPEPWGWPLLGHVLTL-G--KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS 90 (495)
T ss_dssp TCBCCCCCCCBTTTBTHHHH-T--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH
T ss_pred CCCCCCCCCCCcceeeHHhc-C--ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH
Confidence 34556999999999999988 6 67888999999999999999999999999999999999998777678777654333
Q ss_pred hhhccCCceeeeC-CCChHHHHHHHHHHHHHH--------------H------------------------------HHH
Q 037570 110 NVFLYGCQDIGFS-PYGEYWRQARKTCVLGLL--------------N------------------------------VIL 144 (254)
Q Consensus 110 ~~~~~~~~~~~~~-~~g~~w~~~R~~l~~~f~--------------~------------------------------~~~ 144 (254)
... ..+.|++++ ++|+.|+++|++++++|+ . .+.
T Consensus 91 ~~~-~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~ 169 (495)
T 2hi4_A 91 TLI-TDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV 169 (495)
T ss_dssp HTS-TTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred HHh-cCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence 322 235788877 349999999999998753 2 678
Q ss_pred HHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHH
Q 037570 145 TVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEK 224 (254)
Q Consensus 145 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 224 (254)
.+++|+|++++||.+++.. +.+...+.+.+..+............+|++.+++. ...++..++.+.+.+++.++|++
T Consensus 170 ~~~~dvi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~ 246 (495)
T 2hi4_A 170 VSVANVIGAMCFGQHFPES-SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN--PALQRFKAFNQRFLWFLQKTVQE 246 (495)
T ss_dssp HHHHHHHHHHHHGGGSCTT-CHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCC-CHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999988754 32333444444555443332233456777665531 33456777888899999999999
Q ss_pred HHhcCCCCCCCCCccHHHHhhcc
Q 037570 225 HRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 225 ~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
++++.+. +...|+++.|+++
T Consensus 247 r~~~~~~---~~~~d~l~~ll~~ 266 (495)
T 2hi4_A 247 HYQDFDK---NSVRDITGALFKH 266 (495)
T ss_dssp HHHTCCT---TCCCSHHHHHHHH
T ss_pred HHHhhcc---cccccHHHHHHHH
Confidence 9876433 3457999999954
No 5
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.96 E-value=1e-28 Score=203.24 Aligned_cols=204 Identities=22% Similarity=0.355 Sum_probs=152.0
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
++.+.||||++ ++++.. ++++..+.+|+++||++|++++|+.+.|+|+||+.+++|+.++...|.+++....
T Consensus 26 ~~~~lPPGP~~------l~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~ 97 (496)
T 3qz1_A 26 RNLHLPPLVPG------FLHLLQ--PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS 97 (496)
T ss_dssp ---CCCCBCSC------SCTTSS--SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred cCCCCCcCCcc------ccccCC--CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence 45678999986 344435 7889999999999999999999999999999999999999988878888876554
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHH
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN---------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~---------------------------------~~~~~~~dvi~~~~ 155 (254)
......+..|++++++|+.|+++||++.++|+. .+..+++|+|++++
T Consensus 98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~ 177 (496)
T 3qz1_A 98 YKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLT 177 (496)
T ss_dssp TTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTTS
T ss_pred HHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHh
Confidence 443332234888888799999999999999983 78899999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhccc--CCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVS--FSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDD 233 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 233 (254)
||. .. +.....+.+.+...+..... ..+...+|++.+++. +..++..++.+.+.++++++|++++++.+.
T Consensus 178 fG~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 249 (496)
T 3qz1_A 178 FGN---KE-DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN--PGLWRLKQAIENRDHMVEKQLRRHKESMVA-- 249 (496)
T ss_dssp TTC---CC-HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHSCCS--
T ss_pred cCC---CC-ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHHHHhhccC--
Confidence 999 11 22233444444443332222 123455676665542 345677888889999999999999887654
Q ss_pred CCCCccHHHHhhcccc
Q 037570 234 HPNRKDLVHVYSNFKG 249 (254)
Q Consensus 234 ~~~~~d~l~~ll~~~~ 249 (254)
+..+|+++.|+++.+
T Consensus 250 -~~~~d~l~~ll~~~~ 264 (496)
T 3qz1_A 250 -GQWRDMTDYMLQGVG 264 (496)
T ss_dssp -SCCSSSHHHHTTSST
T ss_pred -CCccchHHHHHHHHH
Confidence 456799999998754
No 6
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.95 E-value=5.5e-27 Score=192.06 Aligned_cols=208 Identities=21% Similarity=0.374 Sum_probs=151.6
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhh
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAAN 110 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~ 110 (254)
.+.||||+++|++||++++.. .+++..+.+|+++|||||++++|+.++|+|+||+++++|+.+++..|++|+......
T Consensus 9 ~kLPPGP~~lP~iGn~~~~~~--~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~ 86 (479)
T 3tbg_A 9 GKLPPGPLPLPGLGNLLHVDF--QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86 (479)
T ss_dssp CCCCCCSCCBTTTBTGGGCCT--TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred CCCCCCCCCcCcccchHhhcC--CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence 468999999999999998855 678888999999999999999999999999999999999999888898887766555
Q ss_pred hhcc--CCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHH
Q 037570 111 VFLY--GCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSR 153 (254)
Q Consensus 111 ~~~~--~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~ 153 (254)
.+.. .+.+++++.+|+.|+++|+++.+.|+. .+..+++|+++.
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIAS 166 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHHH
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHH
Confidence 4432 245677777799999999999999876 788999999999
Q ss_pred HHhcccccccchhhhhHHHHHHHHHHHhcccCC--ccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037570 154 SVLGRRAEEETAGKCNKFGELSRRILVQFVSFS--FGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSD 231 (254)
Q Consensus 154 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 231 (254)
++||.+++.. +.......+............. .....|+..++ ....++.....+...+.+.+.++++++..+.
T Consensus 167 ~~fg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (479)
T 3tbg_A 167 LTCGRRFEYD-DPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI---PALAGKVLRFQKAFLTQLDELLTEHRMTWDP 242 (479)
T ss_dssp HHHSCCCCTT-CHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS---HHHHHHHTHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred hhcCCccccc-chhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999876 3334444444444333322211 11122322222 2233445556666777778888777766544
Q ss_pred CCCCCCccHHHHhhc
Q 037570 232 DDHPNRKDLVHVYSN 246 (254)
Q Consensus 232 ~~~~~~~d~l~~ll~ 246 (254)
....+|+++.++.
T Consensus 243 --~~~~~d~~~~~~~ 255 (479)
T 3tbg_A 243 --AQPPRDLTEAFLA 255 (479)
T ss_dssp --TSCCCSHHHHHHH
T ss_pred --ccccchhhhhhhh
Confidence 2445677766653
No 7
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.95 E-value=1.1e-26 Score=190.47 Aligned_cols=210 Identities=23% Similarity=0.363 Sum_probs=155.6
Q ss_pred CCCCCCCCCCCccccccccccCCCCC--CchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcc
Q 037570 30 ELNLPPSPPRFPITGNLHQLLGTATL--PHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT 107 (254)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~--~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~ 107 (254)
+.+.||||+++|++||+..+.. .. ++..+.+++++||+++++++|+.++++|+||+.+++|+.+++..|++++...
T Consensus 10 ~~~lpPgP~~~p~~G~~~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~ 87 (481)
T 3czh_A 10 PMGFPPGPPGLPFIGNIYSLAA--SSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87 (481)
T ss_dssp --CCCCCCCCBTTTBHHHHHHH--CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred CCCCCCCCCCCcccccHhhcCc--ccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence 3567899999999999988733 33 7888999999999999999999999999999999999988776787776543
Q ss_pred hhhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHH
Q 037570 108 AANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVS 152 (254)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~ 152 (254)
....+. .+.|+++..+|+.|+++|+++.++|+. .+.++++|+|+
T Consensus 88 ~~~~~~-~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 88 LFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHHHH-TTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHHhhc-CCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence 333332 234656544499999999999999864 78899999999
Q ss_pred HHHhcccccccchhhhhHHHHHHHHHHHhcccCC--ccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037570 153 RSVLGRRAEEETAGKCNKFGELSRRILVQFVSFS--FGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGS 230 (254)
Q Consensus 153 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 230 (254)
+++||.+++.. +++...+.+.+...+....... +...+|++.+++. ...++..++.+.+.+++.++|++++++.+
T Consensus 167 ~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 243 (481)
T 3czh_A 167 LIIFGERFTYE-DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKASVNRK 243 (481)
T ss_dssp HHHHSSCCCTT-CHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS--SHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCCCCCC-CHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999998743 3333445555555554332211 2345677654431 34566777888899999999999987643
Q ss_pred CCCCCCCccHHHHhhccc
Q 037570 231 DDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 231 ~~~~~~~~d~l~~ll~~~ 248 (254)
. +.+.|+++.|+++.
T Consensus 244 ~---~~~~d~l~~ll~~~ 258 (481)
T 3czh_A 244 P---QLPQHFVDAYLDEM 258 (481)
T ss_dssp T---TCCSSHHHHHHHHH
T ss_pred C---CchHHHHHHHHHHH
Confidence 3 34579999999753
No 8
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.94 E-value=3.4e-26 Score=187.23 Aligned_cols=207 Identities=20% Similarity=0.292 Sum_probs=154.5
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhh
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAAN 110 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~ 110 (254)
.+.||||+++|++||++.+.. .+++..+.+++++||++|++++++.+.++++||+.+++|+.++...|.+++......
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 2fdv_A 9 GKLPPGPTPLPFIGNYLQLNT--EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86 (476)
T ss_dssp CBCCCCCCCBTTTBTGGGCCT--TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred CCCCCCCCCCcccccHhhcCC--cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence 457899999999999998744 677889999999999999999999999999999999999977666777665443333
Q ss_pred hhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHHHH
Q 037570 111 VFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~~~ 155 (254)
... .+.|+++++ |+.|+++|+++.++|+. .+..+++|+|++++
T Consensus 87 ~~~-~~~~l~~~~-g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~ 164 (476)
T 2fdv_A 87 WVF-KGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIV 164 (476)
T ss_dssp HHH-TTCSSSSCC-HHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred hhc-CCCCeEecC-chHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence 222 357888887 99999999999999953 78899999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhcccC--Cccccccc-cchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVSF--SFGDMLPY-LGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDD 232 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 232 (254)
||.+++.. +.+...+.+.+...+...... .+...+|+ ++++ +...++..++.+.+.+++.++|++++++.+.
T Consensus 165 fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~- 239 (476)
T 2fdv_A 165 FGDRFDYK-DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL---PGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP- 239 (476)
T ss_dssp HSSCCCTT-CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS---CSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT-
T ss_pred cCCcCCCC-CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc---CcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 99998754 333344555555544322211 11234564 3333 2344567778888999999999998875433
Q ss_pred CCCCCccHHHHhhccc
Q 037570 233 DHPNRKDLVHVYSNFK 248 (254)
Q Consensus 233 ~~~~~~d~l~~ll~~~ 248 (254)
+.+.|+++.|+++.
T Consensus 240 --~~~~d~l~~ll~~~ 253 (476)
T 2fdv_A 240 --NSPRDFIDSFLIRM 253 (476)
T ss_dssp --TSCCSHHHHHHHHH
T ss_pred --CCCccHHHHHHHHH
Confidence 34579999999753
No 9
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.94 E-value=6.1e-26 Score=185.76 Aligned_cols=206 Identities=24% Similarity=0.398 Sum_probs=149.2
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhh
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAAN 110 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~ 110 (254)
.+.||||+++|++||++.+.. ++++..+.+++++||++|++++|+.+.|+++||+.+++|+.++...|.+++......
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDR--KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD 86 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred CCCCcCCCCCCccccHHhccC--CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 467899999999999998744 678899999999999999999999999999999999999987766777665433222
Q ss_pred hhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHHHH
Q 037570 111 VFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~~~ 155 (254)
... .+.|+++++ |+.|+++|+++.+.|+. .+..+++|+|++++
T Consensus 87 ~~~-~~~~l~~~~-g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~ 164 (476)
T 1po5_A 87 PIF-QGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIV 164 (476)
T ss_dssp SCC-SSCCCCCSS-HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred hhc-CCCceEecC-CcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHH
Confidence 222 356888887 99999999999888853 78899999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhcccC--Cccccccc-cchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVSF--SFGDMLPY-LGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDD 232 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 232 (254)
||.+++.. +.+...+.+.+.......... .+...+|+ ++++ +...++..++.+.+.+++.++|++++++.+.
T Consensus 165 fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l---p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~- 239 (476)
T 1po5_A 165 FGKRFDYK-DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF---PGTHRQIYRNLQEINTFIGQSVEKHRATLDP- 239 (476)
T ss_dssp HSSCCCTT-CHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS---SCSHHHHHHHHHHHHHHHHHHHHHHHTTCCT-
T ss_pred cCCCCCCC-CHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc---CcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 99998754 222223333333322111110 11224454 2222 2333566778888999999999999875433
Q ss_pred CCCCCccHHHHhhcc
Q 037570 233 DHPNRKDLVHVYSNF 247 (254)
Q Consensus 233 ~~~~~~d~l~~ll~~ 247 (254)
+++.|+++.|+.+
T Consensus 240 --~~~~d~l~~ll~~ 252 (476)
T 1po5_A 240 --SNPRDFIDVYLLR 252 (476)
T ss_dssp --TSCCSHHHHHHHH
T ss_pred --CCcccHHHHHHHH
Confidence 3457999999854
No 10
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.94 E-value=5.9e-26 Score=186.05 Aligned_cols=209 Identities=15% Similarity=0.169 Sum_probs=152.6
Q ss_pred CCCCCCCCCCCCccccccccccCC--CCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCc
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGT--ATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKT 106 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~ 106 (254)
++.+.+|||+++|++||++.+... .++++..+.+|+++||++|++++|+.+.|+++||+++++|+.++ ..|.+++..
T Consensus 21 ~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~ 99 (482)
T 3k9v_A 21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEI 99 (482)
T ss_dssp EEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCC
T ss_pred CCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCc
Confidence 567889999999999999887320 13567889999999999999999999999999999999999874 467666543
Q ss_pred ch---hhhhccCCceeeeCCCChHHHHHHHHHHHHHH-H------------------------------------HHHHH
Q 037570 107 TA---ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLL-N------------------------------------VILTV 146 (254)
Q Consensus 107 ~~---~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~-~------------------------------------~~~~~ 146 (254)
.. .......+.|+++++ |+.|+++||.+.+.|. . .+.++
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~ 178 (482)
T 3k9v_A 100 KPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKW 178 (482)
T ss_dssp HHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHH
T ss_pred hHHHHHHHhcCCCCCceeCC-CchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 21 222222467888887 9999999999999983 3 78899
Q ss_pred HHHHHHHHHhcccccccch---hhhhHHHHHHHHHHHhcccCCcccccc--ccchhhhhccHHHHHHHHHHHHHHHHHHH
Q 037570 147 SNNIVSRSVLGRRAEEETA---GKCNKFGELSRRILVQFVSFSFGDMLP--YLGWLDVVTGLIGRLTASSREVDVLFDQV 221 (254)
Q Consensus 147 ~~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
++|+|++++||.+++..++ ....++.+.+..++..... ...+| ++.+++ ....+...+..+.+.++++++
T Consensus 179 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~ 253 (482)
T 3k9v_A 179 SFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRLN--TKVWQAHTLAWDTIFKSVKPC 253 (482)
T ss_dssp HHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHHT--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhcC--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999965411 2335666666666554332 22333 222222 233456667777888999999
Q ss_pred HHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 222 IEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 222 i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
|++++++.++ +...|+++.++++
T Consensus 254 i~~r~~~~~~---~~~~d~l~~ll~~ 276 (482)
T 3k9v_A 254 IDNRLQRYSQ---QPGADFLCDIYQQ 276 (482)
T ss_dssp HHHHHHHTTT---CTTSCHHHHHHHH
T ss_pred HHHHHHHhcc---CCchHHHHHHHhc
Confidence 9998876543 3457888888764
No 11
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.94 E-value=3.7e-26 Score=188.22 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=142.6
Q ss_pred CCCCCCCCCCCccccccccccCC-CCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 30 ELNLPPSPPRFPITGNLHQLLGT-ATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
+.+.||||+++|++||++.+... .......+.+|+++||++|++++|+.+.|+++||+.+++|+.+ ..|++++....
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~ 120 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL 120 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence 46789999999999999887210 0134457889999999999999999999999999999999954 35666654332
Q ss_pred h-hhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHH
Q 037570 109 A-NVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVS 152 (254)
Q Consensus 109 ~-~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~ 152 (254)
. ......+.|++++.+|+.|+++|+++.+.|+. .+.++++|+++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~ 200 (503)
T 3s79_A 121 GLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSN 200 (503)
T ss_dssp HHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHH
T ss_pred hhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHH
Confidence 2 22223467877766689999999999998864 78999999999
Q ss_pred HHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 037570 153 RSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDD 232 (254)
Q Consensus 153 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 232 (254)
.++||.+++.. +....+.+.+......... ...++ .++ ...++..++.+.+.++++++|++++++.+..
T Consensus 201 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 269 (503)
T 3s79_A 201 TLFLRIPLDES--AIVVKIQGYFDAWQALLIK---PDIFF---KIS---WLYKKYEKSVKDLKDAIEVLIAEKRRRISTE 269 (503)
T ss_dssp HHHTCCCCCHH--HHHHHHHHHHHHHHHHTTC---CHHHH---HSG---GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCcccCch--hHHHHHHHHHHHHHHHhcC---cHHHh---hcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999988632 1122222223222221111 11111 111 1235567788889999999999887754321
Q ss_pred C-CCCCccHHHHhhcccccc
Q 037570 233 D-HPNRKDLVHVYSNFKGMA 251 (254)
Q Consensus 233 ~-~~~~~d~l~~ll~~~~~~ 251 (254)
. .++..|+++.|+++.+++
T Consensus 270 ~~~~~~~d~l~~ll~~~~~~ 289 (503)
T 3s79_A 270 EKLEECMDFATELILAEKRG 289 (503)
T ss_dssp TTTTTTCCHHHHHHHHHHTT
T ss_pred cccchHHHHHHHHHHhcccC
Confidence 1 123459999999765443
No 12
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.94 E-value=1e-25 Score=184.46 Aligned_cols=206 Identities=21% Similarity=0.299 Sum_probs=142.8
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhh
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAAN 110 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~ 110 (254)
.+.||||+++|++||++.+.. ++++..+.+++++||++|++++|+.+.|+++||+.+++|+.++...|.+++......
T Consensus 10 ~~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~ 87 (477)
T 1r9o_A 10 GKLPPGPTPLPVIGNILQIGI--KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE 87 (477)
T ss_dssp CBCCCCSSSCC-----CCBCH--HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred CCCCCCCCCCceeccHhhcCC--CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence 457899999999999988733 567888999999999999999999999999999999999977766777655432222
Q ss_pred hhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHHHH
Q 037570 111 VFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~~~ 155 (254)
... .+.|+++++ |+.|+++||++.+.|+. .+..+++|+|++++
T Consensus 88 ~~~-~~~~l~~~~-g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 88 RAN-RGFGIVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp TTT-CTTSSTTCC-HHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHH
T ss_pred hcc-CCCceEecC-ChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence 222 356888886 99999999999888843 78899999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhccc--CCccccccc-cchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVS--FSFGDMLPY-LGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDD 232 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 232 (254)
||.+++.. +.+...+.+.+...+..... ..+...+|+ +++++ ...++..++.+.+.+++.++|++++++.+.
T Consensus 166 fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp---~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~- 240 (477)
T 1r9o_A 166 FHKRFDYK-DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP---GTHNKLLKNVAFMKSYILEKVKEHQESMDM- 240 (477)
T ss_dssp HSCCCCTT-CHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHTCCT-
T ss_pred ccCcCCCC-CHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 99998754 22333444444444432111 112335565 33332 223566777888999999999999876433
Q ss_pred CCCCCccHHHHhhcc
Q 037570 233 DHPNRKDLVHVYSNF 247 (254)
Q Consensus 233 ~~~~~~d~l~~ll~~ 247 (254)
+.+.|+++.|+++
T Consensus 241 --~~~~d~l~~ll~~ 253 (477)
T 1r9o_A 241 --NNPQDFIDCFLMK 253 (477)
T ss_dssp --TCCCSHHHHHHHH
T ss_pred --CCchHHHHHHHHH
Confidence 3457999999854
No 13
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.94 E-value=4.3e-27 Score=193.00 Aligned_cols=208 Identities=16% Similarity=0.170 Sum_probs=142.1
Q ss_pred CCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHc-CcccCCCCCcch
Q 037570 30 ELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNH-DIVFSNRPKTTA 108 (254)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~-~~~~~~~~~~~~ 108 (254)
..+.+|||+++|++||++.+ . +.++.++.+|+++||++|++++|+.+.|+++||+++++|+.++ ...|.+++....
T Consensus 12 k~~~~PGP~~~PliGn~~~~-~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~ 88 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSY-H--KGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP 88 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGG-G--GCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred hhCCCCCCCCcCeecCcHHh-h--cChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence 35679999999999999998 6 6788889999999999999999999999999999999999876 566766654433
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHH
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIVSR 153 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~ 153 (254)
.. . .+.++++.+ |+.|+++|++++++|+. .+..+++|+|+.
T Consensus 89 ~~-~--~~~~l~~~~-g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~ 164 (485)
T 3nxu_A 89 VG-F--MKSAISIAE-DEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITS 164 (485)
T ss_dssp CG-G--GGGSTTTCC-HHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHH
T ss_pred cc-c--cccCccccC-CcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHH
Confidence 32 2 256777777 99999999999998876 778899999999
Q ss_pred HHhcccccccchhhhhHHHHHHHHHHHhcccC---CccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037570 154 SVLGRRAEEETAGKCNKFGELSRRILVQFVSF---SFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGS 230 (254)
Q Consensus 154 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 230 (254)
++||.+++.. +....++.+.+.......... .....+|++.++..........++..+.+.++++++++++++..
T Consensus 165 ~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (485)
T 3nxu_A 165 TSFGVNIDSL-NNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT- 242 (485)
T ss_dssp HHHSCCCCGG-GCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHcCCccccc-cCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhcc-
Confidence 9999999875 333344444443322111000 01123343332211011001112344556666777776665432
Q ss_pred CCCCCCCccHHHHhhcccc
Q 037570 231 DDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 231 ~~~~~~~~d~l~~ll~~~~ 249 (254)
.....|+++.|+++.+
T Consensus 243 ---~~~~~d~l~~ll~~~~ 258 (485)
T 3nxu_A 243 ---QKHRVDFLQLMIDSQN 258 (485)
T ss_dssp ------CCCHHHHHHHHHC
T ss_pred ---CCCcccHHHHHHHhhh
Confidence 1346799999997643
No 14
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.93 E-value=4.9e-26 Score=185.01 Aligned_cols=208 Identities=15% Similarity=0.191 Sum_probs=157.7
Q ss_pred CCCCCCCCC-CccccccccccCCCCCCchHHHHHHHhhC-CeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 31 LNLPPSPPR-FPITGNLHQLLGTATLPHGSLQALSKKYG-PLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 31 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
.+.||||++ +|++||++.+ . .+++.++.+|+++|| ++|++++++.++|+++||+.+++++.++...+++++....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~-~--~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 78 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF-G--KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSF 78 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH-H--HCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGG
T ss_pred CCCCCCCCCCcchhccHHHH-c--cCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHH
Confidence 457888665 9999999988 6 678899999999999 9999999999999999999999999888777877765444
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHH
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN---------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~---------------------------------~~~~~~~dvi~~~~ 155 (254)
..... |.|+++..+|+.|+++|+++.+.|+. .+..+++|++++++
T Consensus 79 ~~~~~--g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~~ 156 (450)
T 3gw9_A 79 MVPVF--GEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCL 156 (450)
T ss_dssp GHHHH--CTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHh--cCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHHH
Confidence 43333 56777655599999999999998875 78899999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHP 235 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 235 (254)
||.+++.. . +...+.+.+..+..... .....+|++.+++. +..++..++.+.+.+++.++|+++++.... ++.
T Consensus 157 fG~~~~~~-~-~~~~~~~~~~~~~~~~~--~~~~~~P~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~ 229 (450)
T 3gw9_A 157 FGEDLRKR-L-DARRFAQLLAKMESSLI--PAAVFLPILLKLPL--PQSARCHEARTELQKILSEIIIARKEEEVN-KDS 229 (450)
T ss_dssp SCHHHHHH-S-CHHHHHHHHHHHHHTCC--GGGGTCGGGGGSCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSC
T ss_pred cCcchhhh-h-hhHHHHHHHHHHHhccc--cchhcccchhccCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCC
Confidence 99988653 1 13455555555433222 23346677765542 344567788889999999999988764211 024
Q ss_pred CCccHHHHhhccccc
Q 037570 236 NRKDLVHVYSNFKGM 250 (254)
Q Consensus 236 ~~~d~l~~ll~~~~~ 250 (254)
...|+++.|+++.++
T Consensus 230 ~~~d~l~~ll~~~~~ 244 (450)
T 3gw9_A 230 STSDLLSGLLSAVYR 244 (450)
T ss_dssp CCCSHHHHHHHCBCT
T ss_pred ccchHHHHHHHhhcc
Confidence 568999999987643
No 15
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.93 E-value=2e-26 Score=187.92 Aligned_cols=204 Identities=16% Similarity=0.173 Sum_probs=148.8
Q ss_pred CCCCCCCCC-CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchh
Q 037570 31 LNLPPSPPR-FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAA 109 (254)
Q Consensus 31 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~ 109 (254)
.+.||+|++ +|++||++.+ . ++++.++.+++++|||||++++++.++|+|+||+.+++|+.+++..+..++.....
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~-~--~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAF-G--KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHH-H--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHh-h--hCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhh
Confidence 346777764 8999999998 7 78999999999999999999999999999999999999998887777666543222
Q ss_pred hhhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhcc
Q 037570 110 NVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGR 158 (254)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~ 158 (254)
.... .|.|+++..+|+.|+++|+++.++|+. .+..++++++++++||.
T Consensus 87 ~~~~-~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG~ 165 (461)
T 3ld6_A 87 TTPV-FGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGK 165 (461)
T ss_dssp HHHH-HCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred hhcc-CCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCc
Confidence 2211 256777765599999999999998876 78999999999999999
Q ss_pred cccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 037570 159 RAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRK 238 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 238 (254)
+++... ...+.+....+...... ....+|.+ ++ .....+..++.+.+.+++.+.|+++++.. +...
T Consensus 166 ~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~--~~--~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-----~~~~ 231 (461)
T 3ld6_A 166 EIRSQL---NEKVAQLYADLDGGFSH--AAWLLPGW--LP--LPSFRRRDRAHREIKDIFYKAIQKRRQSQ-----EKID 231 (461)
T ss_dssp HHHHTC---CHHHHHHHHHHHTTSSH--HHHHSCTT--SC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----CCCC
T ss_pred chhhhh---hhhhhhhhhhhhhhhhh--HHHhhhhh--cc--CcHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCc
Confidence 886541 22333333333222111 11122322 21 13345667788889999999999887652 4467
Q ss_pred cHHHHhhccccccC
Q 037570 239 DLVHVYSNFKGMAC 252 (254)
Q Consensus 239 d~l~~ll~~~~~~~ 252 (254)
|+++.|+++.++++
T Consensus 232 d~l~~ll~~~~~~~ 245 (461)
T 3ld6_A 232 DILQTLLDATYKDG 245 (461)
T ss_dssp SHHHHHHTCBCTTS
T ss_pred chhhhhHHhhhccc
Confidence 99999998776543
No 16
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.92 E-value=4e-24 Score=174.65 Aligned_cols=204 Identities=15% Similarity=0.119 Sum_probs=143.9
Q ss_pred CCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhh
Q 037570 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANV 111 (254)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~ 111 (254)
+.+|||+++|++||++.+.. ++++..+.+|+++||++|++++++.+.++|+||+.+++|+.+ ..|...+. .....
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~~~ 77 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNT--DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QALKF 77 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCS--SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHHHH
T ss_pred CCCCCCCCCCccccHHHHhc--ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHHHH
Confidence 46899999999999998844 567888999999999999999999999999999999999954 23422121 11111
Q ss_pred h-ccCCceeeeC-CCChHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHH
Q 037570 112 F-LYGCQDIGFS-PYGEYWRQARKTCVLGLLN----------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 112 ~-~~~~~~~~~~-~~g~~w~~~R~~l~~~f~~----------------------------------~~~~~~~dvi~~~~ 155 (254)
. ...+.|++++ .+|+.|+++||++.++|+. .+.++++|+|+.++
T Consensus 78 ~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~ 157 (470)
T 2ij2_A 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157 (470)
T ss_dssp HHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHH
Confidence 1 1125677776 3499999999999998865 67789999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHP 235 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 235 (254)
||.+++....++..++.+.+...+....... ...|++.+++ ....++..++.+.+.+++.++|++|+++. .
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~ 228 (470)
T 2ij2_A 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKL--QRANPDDPAY--DENKRQFQEDIKVMNDLVDKIIADRKASG-----E 228 (470)
T ss_dssp HSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC-----CTTSGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----C
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c
Confidence 9999875312223455555555443222111 1113333332 12345566777889999999999888752 3
Q ss_pred CCccHHHHhhcccc
Q 037570 236 NRKDLVHVYSNFKG 249 (254)
Q Consensus 236 ~~~d~l~~ll~~~~ 249 (254)
.+.|+++.|+++.+
T Consensus 229 ~~~dll~~ll~~~~ 242 (470)
T 2ij2_A 229 QSDDLLTHMLNGKD 242 (470)
T ss_dssp CCSSHHHHHHHCCC
T ss_pred CchhHHHHHHhccC
Confidence 45799999998653
No 17
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.91 E-value=2.4e-23 Score=169.42 Aligned_cols=199 Identities=13% Similarity=0.148 Sum_probs=126.5
Q ss_pred CCCCC-CCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhh
Q 037570 32 NLPPS-PPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAAN 110 (254)
Q Consensus 32 ~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~ 110 (254)
+.||| |+++|++||+..+ . .++...+.+++++||++|++++++.++++|+||+.+++|+.+++..|+.++......
T Consensus 4 ~~PPg~p~~~P~iG~~~~~-~--~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~ 80 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF-R--TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT 80 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH-T--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred CCCCCCCCCCCCccCHHHH-h--hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH
Confidence 46887 7789999999988 6 778899999999999999999999999999999999999987666676665433222
Q ss_pred hhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhccc
Q 037570 111 VFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGRR 159 (254)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~~ 159 (254)
... +.+++ .+ |+.|+++|+++.++|+. .+..+++|++++++||.+
T Consensus 81 ~~~--g~~~~-~~-~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~ 156 (455)
T 2cib_A 81 PIF--GEGVV-FD-ASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKK 156 (455)
T ss_dssp HHH--C----------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred hhc--CCccc-cC-cHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCCC
Confidence 222 34554 45 89999999999998865 788999999999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 037570 160 AEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKD 239 (254)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 239 (254)
++... ..++.+.+..+..... .+...+||+. ....++..++.+.+.+++.++|++|+++... ...++|
T Consensus 157 ~~~~~---~~~~~~~~~~~~~~~~--~~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~~~d 224 (455)
T 2cib_A 157 FRDQL---DGRFAKLYHELERGTD--PLAYVDPYLP-----IESFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRD 224 (455)
T ss_dssp HHTTC---CHHHHHHHHHHHTTCC--GGGGTCTTCS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCC
T ss_pred cchhh---hHHHHHHHHHHHhhhh--HHHHhcccCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCccc
Confidence 86531 1345555554432111 1122334321 1223455677788999999999998875432 112349
Q ss_pred HHHHhhcccc
Q 037570 240 LVHVYSNFKG 249 (254)
Q Consensus 240 ~l~~ll~~~~ 249 (254)
+++.|+++.+
T Consensus 225 ll~~ll~~~~ 234 (455)
T 2cib_A 225 MLDVLIAVKA 234 (455)
T ss_dssp HHHHHHHCBC
T ss_pred HHHHHHHhhh
Confidence 9999998754
No 18
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.90 E-value=8e-24 Score=172.53 Aligned_cols=203 Identities=16% Similarity=0.216 Sum_probs=146.1
Q ss_pred CCCCCCCC-CCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcc
Q 037570 29 IELNLPPS-PPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT 107 (254)
Q Consensus 29 ~~~~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~ 107 (254)
++.+.||| |+++|++||++.+ . .+++.++.+|+++||+||+++++|.+.|+|++|+.+++++.++...+..++...
T Consensus 8 ~~~~~PPg~P~~lP~iG~l~~~-~--~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 8 AGVKSPPYIFSPIPFLGHAIAF-G--KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp --CCCCCBCCCSSTTTBTHHHH-H--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCCCCCccccHHhh-c--cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 34678999 8899999999998 6 678999999999999999999999999999999999999987765554332211
Q ss_pred -hhhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHH
Q 037570 108 -AANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSV 155 (254)
Q Consensus 108 -~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~ 155 (254)
....+. |.|+++..+|+.|+++||++.+.|+. .+..++++++++++
T Consensus 85 ~~~~~~~--g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~~~ 162 (461)
T 3i3k_A 85 RLTTPVF--GKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCL 162 (461)
T ss_dssp HHHHHHH--CTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHH
T ss_pred Hhhhhhc--CCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHHH
Confidence 111222 57777775589999999999998865 78889999999999
Q ss_pred hcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 037570 156 LGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHP 235 (254)
Q Consensus 156 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 235 (254)
||.++... ....+.+.+..+...... ....+|. +++ ....++..++.+.+.+++.+.|+++++.. +
T Consensus 163 ~G~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~P~--~l~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~ 228 (461)
T 3i3k_A 163 HGKEIRSQ---LNEKVAQLYADLDGGFSH--AAWLLPG--WLP--LPSFRRRDRAHREIKDIFYKAIQKRRQSQ-----E 228 (461)
T ss_dssp TCHHHHHT---CCHHHHHHHHHHHTTSSH--HHHHSCT--TSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----C
T ss_pred ccHhhhhH---HHHHHHHHHHHHHhcccc--chhhccc--ccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c
Confidence 99887543 112333333333221111 1112331 221 13345667788889999999999887652 3
Q ss_pred CCccHHHHhhccccc
Q 037570 236 NRKDLVHVYSNFKGM 250 (254)
Q Consensus 236 ~~~d~l~~ll~~~~~ 250 (254)
...|+++.|+++.++
T Consensus 229 ~~~d~l~~ll~~~~~ 243 (461)
T 3i3k_A 229 KIDDILQTLLDATYK 243 (461)
T ss_dssp CCCSHHHHHHTCBCT
T ss_pred ccccHHHHHHHhhhc
Confidence 467999999987644
No 19
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.90 E-value=5.7e-24 Score=173.68 Aligned_cols=199 Identities=17% Similarity=0.227 Sum_probs=121.4
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCC-Ccchh
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRP-KTTAA 109 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~-~~~~~ 109 (254)
...||||+++|++||++.+ . .++..++.++++ ||+|+++++++.++++|+||+.+++|+.++ .|..++ .....
T Consensus 22 ~eppPgP~~~P~iG~~~~~-~--~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~ 95 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRL-A--RDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL 95 (467)
T ss_dssp CBCCEECCCCSTTHHHHHH-H--HCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred CCCCCCCCCCCcccchHHh-c--cCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH
Confidence 4568899999999999998 6 678889999988 999999999999999999999999999766 453332 22222
Q ss_pred hhhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhcc
Q 037570 110 NVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGR 158 (254)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~ 158 (254)
.... +..++++.+ |+.|+++|+++.+.|+. .+..+++++++.++||.
T Consensus 96 ~~~~-g~~~l~~~d-g~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g~ 173 (467)
T 3dbg_A 96 EGLL-GKEGVATAN-GPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRG 173 (467)
T ss_dssp ----------------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSCS
T ss_pred HHhc-CCCCcccCC-cHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhCC
Confidence 2222 126787777 99999999999999976 78889999999999999
Q ss_pred cccccchhhhhHHHHHHHHHHHhcccCCccccccc--cchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 037570 159 RAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPY--LGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPN 236 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 236 (254)
+++.. ....+.+.+..+...... ...+|+ +.+++ ....++..++.+.+.+++.++|++++++ .+.
T Consensus 174 ~~~~~---~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~ 240 (467)
T 3dbg_A 174 QYMDE---RAERLCVALATVFRGMYR---RMVVPLGPLYRLP--LPANRRFNDALADLHLLVDEIIAERRAS-----GQK 240 (467)
T ss_dssp SCCHH---HHHHHHHHHHHHHHC-----------------------------CCHHHHHHHHHHHHHHHTTC-----CSS
T ss_pred cccch---hHHHHHHHHHHHHHHHHH---HhccchhhhhhCC--ChHhHHHHHHHHHHHHHHHHHHHHHHhc-----CCC
Confidence 98742 234555555555443221 223342 22222 2334566777888999999999988764 234
Q ss_pred CccHHHHhhccccc
Q 037570 237 RKDLVHVYSNFKGM 250 (254)
Q Consensus 237 ~~d~l~~ll~~~~~ 250 (254)
+.|+++.|+++.++
T Consensus 241 ~~dll~~ll~~~~~ 254 (467)
T 3dbg_A 241 PDDLLTALLEAKDD 254 (467)
T ss_dssp CCSHHHHHTTC---
T ss_pred chHHHHHHHhhccC
Confidence 67999999987653
No 20
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.90 E-value=6.2e-23 Score=166.51 Aligned_cols=194 Identities=15% Similarity=0.219 Sum_probs=138.2
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
++.+.||||+++|++||++.+ . .++. .+.+++++||++|+++++|.+.++++||+.+++|+.+++..|+.+.. ..
T Consensus 9 ~~~~~pPgp~~~P~iG~~~~~-~--~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~ 83 (444)
T 2ve3_A 9 NSLPIPPGDFGLPWLGETLNF-L--NDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-LS 83 (444)
T ss_dssp CCCCCCCCCCCBTTTBTHHHH-H--HCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-HH
T ss_pred CCCCCCCCCCCCCccccHHHH-h--cCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-HH
Confidence 346789999999999999888 4 4455 78899999999999998888999999999999999876555553221 12
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhc
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLG 157 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG 157 (254)
..... +..++++.+ |+.|+++|+++.++|+. .+..+++|++++++||
T Consensus 84 ~~~~~-g~~~l~~~~-g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~fG 161 (444)
T 2ve3_A 84 TRILL-GPNALATQM-GEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMG 161 (444)
T ss_dssp HHHHH-CTTSGGGCC-HHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHh-CccccccCC-chHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHcC
Confidence 22222 223777776 99999999999999875 6789999999999999
Q ss_pred ccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 037570 158 RRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNR 237 (254)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 237 (254)
+.... + .++.+.+......... +|+. ++. ...++..++.+.+.++++++|++++++. ...
T Consensus 162 -~~~~~---~-~~~~~~~~~~~~~~~~------~~~~--~p~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~ 221 (444)
T 2ve3_A 162 -EKVSQ---N-PQLFPWFETYIQGLFS------LPIP--LPN--TLFGKSQRARALLLAELEKIIKARQQQP-----PSE 221 (444)
T ss_dssp -HHHHS---C-TTHHHHHHHHHHHHSS------CCCC--STT--SHHHHHHHHHHHHHHHHHHHHHHHHTSC-----CCC
T ss_pred -CCccc---H-HHHHHHHHHHHHHHhc------CCcc--CCC--cHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCc
Confidence 43322 1 3344444443332211 1211 111 1234556677888999999999988651 345
Q ss_pred ccHHHHhhcccc
Q 037570 238 KDLVHVYSNFKG 249 (254)
Q Consensus 238 ~d~l~~ll~~~~ 249 (254)
.|+++.|+++.+
T Consensus 222 ~d~l~~ll~~~~ 233 (444)
T 2ve3_A 222 EDALGILLAARD 233 (444)
T ss_dssp SSHHHHHHHCBC
T ss_pred cCHHHHHHhccc
Confidence 799999998754
No 21
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.89 E-value=5.5e-23 Score=168.68 Aligned_cols=211 Identities=14% Similarity=0.083 Sum_probs=138.7
Q ss_pred CCCCCCCCCCCCccccccccccCC--CCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCc
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGT--ATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKT 106 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~ 106 (254)
+|.+.+|||++.++. +++.+... ..+++..+.+|+++||+||++++|+.+.|+++||+++++|+.++. .|.+++..
T Consensus 6 ~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~~ 83 (487)
T 3n9y_A 6 RPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFLI 83 (487)
T ss_dssp BCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCCC
T ss_pred CCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCCC
Confidence 567789999987765 66655220 135677899999999999999999999999999999999997664 67777643
Q ss_pred chh---hhhccCCceeeeCCCChHHHHHHHHHHHH-HHH---------------------------------------HH
Q 037570 107 TAA---NVFLYGCQDIGFSPYGEYWRQARKTCVLG-LLN---------------------------------------VI 143 (254)
Q Consensus 107 ~~~---~~~~~~~~~~~~~~~g~~w~~~R~~l~~~-f~~---------------------------------------~~ 143 (254)
... ......+.|+++.+ |+.|+++|++++++ |+. .+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~ 162 (487)
T 3n9y_A 84 PPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDL 162 (487)
T ss_dssp HHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHH
T ss_pred cHHHHHHHHccccCCCccCC-cHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHHH
Confidence 321 11222356788777 99999999999996 554 67
Q ss_pred HHHHHHHHHHHHhcccccccchh---hhhHHHHHHHHHHHhcccCCccccccc--cchhhhhccHHHHHHHHHHHHHHHH
Q 037570 144 LTVSNNIVSRSVLGRRAEEETAG---KCNKFGELSRRILVQFVSFSFGDMLPY--LGWLDVVTGLIGRLTASSREVDVLF 218 (254)
Q Consensus 144 ~~~~~dvi~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~l~~~~~~~~~~~~~~~~~~~~~ 218 (254)
.++++|+|++++||.+++..++. ....+.+.+..++..... ...+|. +.+++ ....++..+..+.+.+++
T Consensus 163 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~--~~~~~~~~~~~~~~~~~~ 237 (487)
T 3n9y_A 163 FRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFR--TKTWKDHVAAWDVIFSKA 237 (487)
T ss_dssp HHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHC--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcc--cHHHHHHHHHHHHHHHHH
Confidence 89999999999999999754221 223455555554443322 223342 22221 122344445555556666
Q ss_pred HHHHHHHHhcCCC--CCCCCCccHHHHhhcc
Q 037570 219 DQVIEKHRISGSD--DDHPNRKDLVHVYSNF 247 (254)
Q Consensus 219 ~~~i~~~~~~~~~--~~~~~~~d~l~~ll~~ 247 (254)
++.+++++++..+ .......|+++.++++
T Consensus 238 ~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~ 268 (487)
T 3n9y_A 238 DIYTQNFYWELRQKGSVHHDYRGILYRLLGD 268 (487)
T ss_dssp HHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCcccchHHHHHHHHhc
Confidence 6666654332111 0013457999999965
No 22
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.84 E-value=7.2e-22 Score=162.24 Aligned_cols=198 Identities=12% Similarity=0.051 Sum_probs=135.3
Q ss_pred CCCCCCCCCCC-CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCc-ccCCCCCc
Q 037570 29 IELNLPPSPPR-FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDI-VFSNRPKT 106 (254)
Q Consensus 29 ~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~-~~~~~~~~ 106 (254)
+..+.||||++ +|++||++.+ . .+++.++.+++++||+||++++++.++++|+||+.+++|+.++.. .+..++..
T Consensus 10 ~~~~~PPgp~~~lPliG~~~~~-~--~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~ 86 (491)
T 3v8d_A 10 RQTGEPPLENGLIPYLGCALQF-G--ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCTTSCCEEEEEESSTTTTGGG-T--CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHH
T ss_pred cCCCCCCCCCCCcceeccHHHH-h--cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHH
Confidence 44678999998 6999999999 7 889999999999999999999999999999999999999965531 22221111
Q ss_pred chhhhhccCCceeeeCCCChHHHHHHHHHHHHHHH--------------------------------------HHHHHHH
Q 037570 107 TAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN--------------------------------------VILTVSN 148 (254)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~--------------------------------------~~~~~~~ 148 (254)
...... |.+.+...+|+.|+++|+.+.+.|+. .+..+++
T Consensus 87 -~~~~~~--g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~ 163 (491)
T 3v8d_A 87 -LSAKAF--GHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMF 163 (491)
T ss_dssp -HHHHHH--TCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHH
T ss_pred -HHHHhc--CCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHH
Confidence 112222 34444443499999999999998876 6778899
Q ss_pred HHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccch-hhhhccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037570 149 NIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGW-LDVVTGLIGRLTASSREVDVLFDQVIEKHRI 227 (254)
Q Consensus 149 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 227 (254)
++++.++||.+.+.. +.....+.+.++.+... ...+|.+.. ++ ....++..++.+.+.+++.+.+++++
T Consensus 164 ~~~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~l~~~~p--~~~~~~~~~a~~~l~~~~~~~~~~~~- 233 (491)
T 3v8d_A 164 EAGYLTIFGRDLTRR-DTQKAHILNNLDNFKQF------DKVFPALVAGLP--IHMFRTAHNAREKLAESLRHENLQKR- 233 (491)
T ss_dssp HHHHHHHHCBCCSCG-GGHHHHHHHHHHHHHHH------HHHHHHHHTTCC--GGGCHHHHHHHHHHHHHTSHHHHTTC-
T ss_pred HHHHHHHcCcccccc-chhhhhhHHHHHHHHHH------HHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 999999999987654 22233344444444321 123333221 22 23345666677777766666554433
Q ss_pred cCCCCCCCCCccHHHHhhcccc
Q 037570 228 SGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 228 ~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
++..|+++.++...+
T Consensus 234 -------~~~~d~l~~l~~~~~ 248 (491)
T 3v8d_A 234 -------ESISELISLRMFLND 248 (491)
T ss_dssp -------BSCCHHHHHHHHHHH
T ss_pred -------ccccHHHHHHHHHhh
Confidence 234689998886543
No 23
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.83 E-value=8e-20 Score=148.73 Aligned_cols=187 Identities=12% Similarity=0.170 Sum_probs=128.0
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch-hhhhc---cCCceeeeCCCChHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA-ANVFL---YGCQDIGFSPYGEYWR 129 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~g~~w~ 129 (254)
..++..+.+|+++|||||++++|+.+.|+|+||+.+++|+.++ .+.+++.... ..... ..+.|+++..+|+.|+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~ 87 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH 87 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence 5567888999999999999999999999999999999999642 3443332111 11000 1256777765599999
Q ss_pred HHHHHHHHHHHH-----------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHH
Q 037570 130 QARKTCVLGLLN-----------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGEL 174 (254)
Q Consensus 130 ~~R~~l~~~f~~-----------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~ 174 (254)
++||+++++|+. .+..+++|+|+.++||.+++.. .....++.+.
T Consensus 88 ~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~-~~~~~~~~~~ 166 (456)
T 3mdm_A 88 KQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSML-LGAQKPLSQA 166 (456)
T ss_dssp HHHHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGG-GTCCHHHHHH
T ss_pred HHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhh-cccccHHHHH
Confidence 999999998876 7888999999999999999865 2233445555
Q ss_pred HHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 175 SRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 175 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
+..+...... ...|++.+++......+...+..+.+.+++.++++++++..+.. .+.+.|+++.++++.
T Consensus 167 ~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~~~d~l~~ll~~~ 235 (456)
T 3mdm_A 167 VKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG-EEVPADILTQILKAE 235 (456)
T ss_dssp HHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCHHHHHHHHT
T ss_pred HHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhHHHHHHHhc
Confidence 5544432221 11233333332122334566777788889999998887654321 134679999999764
No 24
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.81 E-value=4.4e-20 Score=149.29 Aligned_cols=179 Identities=13% Similarity=0.153 Sum_probs=120.8
Q ss_pred CCCCCCCCCCccccccc-cccCCCCCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 31 LNLPPSPPRFPITGNLH-QLLGTATLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
.+.||||+++|++|++. .+ . .+++..+.++ ++||||+++++ ++.+.++++||+.+++|+.++ .|++++....
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~-~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDF-A--ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp ---------CCBHHHHHHHH-H--HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred ccCCCCCCccccCCCCCccc-c--cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 56799999999999986 44 5 6789999999 99999999998 778899999999999999765 5666543111
Q ss_pred hhhh---ccCCceeeeCCCChHHHHHHHHHHHHHHH---------------------------------HH-HHHHHHHH
Q 037570 109 ANVF---LYGCQDIGFSPYGEYWRQARKTCVLGLLN---------------------------------VI-LTVSNNIV 151 (254)
Q Consensus 109 ~~~~---~~~~~~~~~~~~g~~w~~~R~~l~~~f~~---------------------------------~~-~~~~~dvi 151 (254)
.... ...+.++++.+ |+.|+++|+++.++|+. .+ ..+++|+|
T Consensus 99 ~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi 177 (436)
T 2cd8_A 99 TPLTEAEAALNHNMLESD-PPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVI 177 (436)
T ss_dssp SCCCTTGGGTCCSGGGCC-TTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHH
T ss_pred cccccccccccccccccC-chHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 1110 11256777776 99999999999998876 23 35788888
Q ss_pred HHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037570 152 SRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSD 231 (254)
Q Consensus 152 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 231 (254)
+. +||.+.+.. ..+.+.+..++.. . + . ++..++.+.+.+++.++|++++++
T Consensus 178 ~~-~~G~~~~~~-----~~~~~~~~~~~~~------~---~---------~--~~~~~~~~~~~~~~~~~i~~r~~~--- 228 (436)
T 2cd8_A 178 SE-LLGVPEPDR-----AAFRVWTDAFVFP------D---D---------P--AQAQTAMAEMSGYLSRLIDSKRGQ--- 228 (436)
T ss_dssp HH-HHTCCGGGH-----HHHHHHHHHHHSC------S---S---------T--THHHHHHHHHHHHHHHHHHHHTTS---
T ss_pred HH-HhCCCHHHH-----HHHHHHHHHHhcc------C---C---------H--HHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 87 688865422 3344443333210 0 0 0 235567778889999999988753
Q ss_pred CCCCCCccHHHHhhcccc
Q 037570 232 DDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 232 ~~~~~~~d~l~~ll~~~~ 249 (254)
...|+++.|+++.+
T Consensus 229 ----~~~d~l~~ll~~~~ 242 (436)
T 2cd8_A 229 ----DGEDLLSALVRTSD 242 (436)
T ss_dssp ----CCCSHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHhhh
Confidence 23689999997643
No 25
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.81 E-value=6.9e-19 Score=141.60 Aligned_cols=183 Identities=11% Similarity=0.021 Sum_probs=128.5
Q ss_pred CCccccccccccCCCCCCchHHHHHHHhhC-CeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcc--hhhhhccC
Q 037570 39 RFPITGNLHQLLGTATLPHGSLQALSKKYG-PLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT--AANVFLYG 115 (254)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~--~~~~~~~~ 115 (254)
+.|++||+..+ . .+++.++.+++++|| ||++++++|.+.++++||+.++.++. ...|..++... ....+. +
T Consensus 7 g~P~lG~~~~~-~--~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~-g 80 (417)
T 1izo_A 7 HDKSLDNSLTL-L--KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD--TDRFQRQNALPKRVQKSLF-G 80 (417)
T ss_dssp BCCCTTHHHHH-H--HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC--TTTEECTTCSCHHHHTTTT-C
T ss_pred CCCccchHHHH-h--hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc--ccccccccccccchhhhhc-c
Confidence 34899999988 6 678999999999998 99999999999999999999986543 23454433221 111222 2
Q ss_pred CceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhcccccccc
Q 037570 116 CQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGRRAEEET 164 (254)
Q Consensus 116 ~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~~~~~~~ 164 (254)
..++++.+ |+.|+++|+++.++|+. .+..+++++|+++ ||.+.+..
T Consensus 81 ~~~l~~~d-g~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~- 157 (417)
T 1izo_A 81 VNAIQGMD-GSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYW-AGVPLKET- 157 (417)
T ss_dssp TTCGGGCC-HHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHH-HTCCCCTT-
T ss_pred ccceeecC-ChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-cCCCCCch-
Confidence 24677776 99999999999998876 7789999999998 69987643
Q ss_pred hhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHh
Q 037570 165 AGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVY 244 (254)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 244 (254)
+..++.+.+..+...... ..| ...+..++.+.+.+++.++|++++++... ....|+++.|
T Consensus 158 --~~~~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~~~d~l~~l 217 (417)
T 1izo_A 158 --EVKERADDFIDMVDAFGA-----VGP----------RHWKGRRARPRAEEWIEVMIEDARAGLLK---TTSGTALHEM 217 (417)
T ss_dssp --THHHHHHHHHHHHHHTTC-----CSH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSSC---CCTTSHHHHH
T ss_pred --HHHHHHHHHHHHHhhccc-----CCc----------cchhHHHHHHHHHHHHHHHHHHHHhhccC---CCcCCHHHHH
Confidence 223344444333322110 011 12345567788999999999999875432 2356999999
Q ss_pred hccccc
Q 037570 245 SNFKGM 250 (254)
Q Consensus 245 l~~~~~ 250 (254)
+++.++
T Consensus 218 l~~~~~ 223 (417)
T 1izo_A 218 AFHTQE 223 (417)
T ss_dssp HHCBCT
T ss_pred HHhccc
Confidence 987543
No 26
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.80 E-value=1.6e-18 Score=139.37 Aligned_cols=185 Identities=12% Similarity=0.042 Sum_probs=126.8
Q ss_pred CCCCCCCccccccccccCCCCCCchHHHHHHHhh-CCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcc--hhh
Q 037570 34 PPSPPRFPITGNLHQLLGTATLPHGSLQALSKKY-GPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT--AAN 110 (254)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~--~~~ 110 (254)
|||| |++||+..+ . .++..++.+++++| |||+++.+++.+.+++++|+.++ ++.+. ..|++++... ...
T Consensus 4 pPg~---P~iG~~~~~-~--~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~ 75 (415)
T 3awm_A 4 TPHT---KGPDETLSL-L--ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQK 75 (415)
T ss_dssp --------CCCCHHHH-H--HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHT
T ss_pred CCCC---CccchHHHH-H--hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhh
Confidence 5665 899999988 6 67899999999999 79999999888999999999986 66543 3555443221 111
Q ss_pred hhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhccc
Q 037570 111 VFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGRR 159 (254)
Q Consensus 111 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~~ 159 (254)
.+. +..++++.+ |+.|+++|+++.+.|+. .+..+++++++++ ||.+
T Consensus 76 ~~~-g~~~l~~~d-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~-~G~~ 152 (415)
T 3awm_A 76 TLL-GQGGVQGLD-GETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAW-AGVP 152 (415)
T ss_dssp TTS-CSSSGGGCC-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHH-HTCC
T ss_pred hcc-CCcceeecC-cHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHH-cCCC
Confidence 122 225677776 99999999999998875 7788999999999 8998
Q ss_pred ccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 037570 160 AEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKD 239 (254)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 239 (254)
.+.. +..++.+.+..+.... +++ .+...+..++.+.+.+++.++|++++++..+ ....|
T Consensus 153 ~~~~---~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~~~d 211 (415)
T 3awm_A 153 LPDD---EAGNRAGELRALFDAA---------GSA------SPRHLWSRLARRRVDAWAKRIIEGIRAGSIG---SGSGT 211 (415)
T ss_dssp CCGG---GHHHHHHHHHHHHHST---------TCS------SHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC---CCTTS
T ss_pred CCcc---hHHHHHHHHHHHHHHh---------ccc------CchHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCCCC
Confidence 7643 2233333333332211 100 1122345677788999999999998875422 23569
Q ss_pred HHHHhhccccc
Q 037570 240 LVHVYSNFKGM 250 (254)
Q Consensus 240 ~l~~ll~~~~~ 250 (254)
+++.|+++.++
T Consensus 212 ~l~~ll~~~~~ 222 (415)
T 3awm_A 212 AAYAIAWHRDR 222 (415)
T ss_dssp HHHHHHHCBCT
T ss_pred HHHHHHhhhhc
Confidence 99999987543
No 27
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.75 E-value=3.9e-19 Score=141.75 Aligned_cols=169 Identities=17% Similarity=0.146 Sum_probs=119.9
Q ss_pred CCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCC-Ccchhhhhc
Q 037570 35 PSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRP-KTTAANVFL 113 (254)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~-~~~~~~~~~ 113 (254)
+++..+|++||++.+ . .+++..+.+++++|||+++ ++++.+.++++||+.+++|+.++ .|.+++ .......+.
T Consensus 2 ~~~~~~p~iGnl~~~-~--~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~ 75 (389)
T 1n97_A 2 KRLSLREAWPYLKDL-Q--QDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT 75 (389)
T ss_dssp EECCHHHHHHHHHHH-H--HCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH
T ss_pred cccccccccccHHHH-h--hChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh
Confidence 345668999999988 5 6788899999999999999 99999999999999999999766 676654 221222222
Q ss_pred cCCceeeeCCCChHHHHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHhccccccc
Q 037570 114 YGCQDIGFSPYGEYWRQARKTCVLGLLN------------------------------VILTVSNNIVSRSVLGRRAEEE 163 (254)
Q Consensus 114 ~~~~~~~~~~~g~~w~~~R~~l~~~f~~------------------------------~~~~~~~dvi~~~~fG~~~~~~ 163 (254)
+.++++.+ |+.|+++|+++.++|+. .+..+++|++++++||.++++
T Consensus 76 --g~~l~~~~-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~- 151 (389)
T 1n97_A 76 --GRGLLTDW-GESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSP- 151 (389)
T ss_dssp --CSSTTTCC-HHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCH-
T ss_pred --CCccccCC-cHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcchH-
Confidence 46788777 99999999999998876 678999999999999998861
Q ss_pred chhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 037570 164 TAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKH 225 (254)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 225 (254)
++.+.+..+...... ..++++.+++ ....++..++.+.+.+++.++|+++
T Consensus 152 ------~~~~~~~~~~~~~~~----~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~i~~r 201 (389)
T 1n97_A 152 ------SLAEHALKALDRIMA----QTRSPLALLD--LAAEARFRKDRGALYREAEALIVHP 201 (389)
T ss_dssp ------HHHHHHHHHHHHHHH----HHHCGGGGGC--HHHHHHHHHHHHHHHHHHGGGTTST
T ss_pred ------HHHHHHHHHHHHHHH----HHhhHHHhcC--CchhHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444332211 0111122222 1223455666667777777766543
No 28
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.75 E-value=8.2e-19 Score=144.05 Aligned_cols=106 Identities=15% Similarity=0.106 Sum_probs=79.7
Q ss_pred CCCCCCCCCCC-CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCc-
Q 037570 29 IELNLPPSPPR-FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKT- 106 (254)
Q Consensus 29 ~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~- 106 (254)
+..+.||||++ +|++||++.+ . .+++..+.+|+++||++|++++|+.++|+|+||+.+++|+.++.. +..++..
T Consensus 10 ~~~~~pPgp~~~~P~iG~~~~~-~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~ 85 (491)
T 3dax_A 10 RQTGEPPLENGLIPYLGCALQF-G--ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHF 85 (491)
T ss_dssp CCTTCCCEEEEEESCTTTTGGG-T--CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHH
T ss_pred cCCCCCCcCCCcccchhhHHHH-h--hCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHH
Confidence 33567899887 8999999988 6 678889999999999999999999999999999999999976542 2211111
Q ss_pred chhhhhccCCceee-eCCCChHHHHHHHHHHHHHHH
Q 037570 107 TAANVFLYGCQDIG-FSPYGEYWRQARKTCVLGLLN 141 (254)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~g~~w~~~R~~l~~~f~~ 141 (254)
....... |.+++ ..+ |+.|+++|+.+.+.|+.
T Consensus 86 ~~~~~~~--g~~~~~~~~-g~~w~~~r~~~~~~f~~ 118 (491)
T 3dax_A 86 ATSAKAF--GHRSIDPMD-GNTTENINDTFIKTLQG 118 (491)
T ss_dssp HHHHHHH--TCCCCCGGG-TSBCCCHHHHHHHHHSH
T ss_pred HHHHHHc--CCCcccccc-hhHHHHHHHHHHHhcCc
Confidence 1111122 45555 555 88999999988887754
No 29
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.74 E-value=1.7e-18 Score=142.38 Aligned_cols=96 Identities=10% Similarity=0.033 Sum_probs=71.3
Q ss_pred CCCCCCCCCCC-CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCc-
Q 037570 29 IELNLPPSPPR-FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKT- 106 (254)
Q Consensus 29 ~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~- 106 (254)
++.+.||||++ +|++||++.+ . .+++.++.+|+++||++|++++|+.++|+++||+++++|+.++...+..++..
T Consensus 15 ~~~~~PPgp~~~~P~iG~~~~~-~--~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~ 91 (498)
T 3b6h_A 15 RRPGEPPLDLGSIPWLGYALDF-G--KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI 91 (498)
T ss_dssp CCTTCCCEECCSSTTTBTHHHH-H--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred cCCCCCCCCCCCCcchhhHHHh-c--cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence 34567899988 8999999988 5 66889999999999999999999999999999999999997655323222211
Q ss_pred chhhhhccCCceeeeCCCChHHHH
Q 037570 107 TAANVFLYGCQDIGFSPYGEYWRQ 130 (254)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~g~~w~~ 130 (254)
...... .|.++++.+ |+.|++
T Consensus 92 ~~~~~~--~g~~~~~~~-~~~~rr 112 (498)
T 3b6h_A 92 FLMERI--FDVQLPHYS-PSDEKA 112 (498)
T ss_dssp HHHHHT--SCCCCTTCC-HHHHHH
T ss_pred HHHHHH--cCCCccccC-HHHHHH
Confidence 111111 245666555 777753
No 30
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.73 E-value=8.4e-17 Score=128.92 Aligned_cols=177 Identities=10% Similarity=0.065 Sum_probs=112.7
Q ss_pred CCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-CcCeEEeccHHHHHHHHHHcC-cccCCCCCcchhh
Q 037570 33 LPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-YSPTLVVSSAEIAREIIKNHD-IVFSNRPKTTAAN 110 (254)
Q Consensus 33 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~vvv~dp~~ik~il~~~~-~~~~~~~~~~~~~ 110 (254)
.||||+++|++|++. .+++..+.+|+ +||||+++.++ |.+.++|++++.+++++.++. ..+..++......
T Consensus 2 ~pPGp~~~P~~g~~~------~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~ 74 (404)
T 1jfb_A 2 MASGAPSFPFSRASG------PEPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS 74 (404)
T ss_dssp ----CCBSSCCCSST------TSCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred CCCCCCCCCCCCCcC------CCccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence 489999999999865 45777888886 59999999875 667778999999999997652 2233333222111
Q ss_pred h----hccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHH
Q 037570 111 V----FLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------------VILTVSNNIV 151 (254)
Q Consensus 111 ~----~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------------~~~~~~~dvi 151 (254)
. ...++.++++++ |+.|+++||+++++|+. .+...+.+++
T Consensus 75 ~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i 153 (404)
T 1jfb_A 75 ASGKQAAKAKPTFVDMD-PPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYI 153 (404)
T ss_dssp HHHHHHTTSCCCGGGCC-TTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHH
T ss_pred ccccchhcccCcccccC-chhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHH
Confidence 1 112235677777 99999999999999876 2333345566
Q ss_pred HHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037570 152 SRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSD 231 (254)
Q Consensus 152 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 231 (254)
+..+||.+.+.. ++......... .+ ....++..++.+.+.+++.++|++++++
T Consensus 154 ~~~~~G~~~~~~------~~~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--- 206 (404)
T 1jfb_A 154 IYTLLGVPFNDL------EYLTQQNAIRT-----------NG-------SSTAREASAANQELLDYLAILVEQRLVE--- 206 (404)
T ss_dssp HHHHHTCCGGGH------HHHHHHHHHHH-----------CT-------TSCHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred HHHHcCCCHHHH------HHHHHHHHHHh-----------cc-------CcchHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 666677655321 11111111110 00 0122455667788899999999988764
Q ss_pred CCCCCCccHHHHhhccc
Q 037570 232 DDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 232 ~~~~~~~d~l~~ll~~~ 248 (254)
...|+++.|+++.
T Consensus 207 ----~~~d~l~~ll~~~ 219 (404)
T 1jfb_A 207 ----PKDDIISKLCTEQ 219 (404)
T ss_dssp ----CCSSHHHHHHHHT
T ss_pred ----CCCcHHHHHHHhh
Confidence 2469999999643
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.72 E-value=5.4e-17 Score=130.07 Aligned_cols=176 Identities=17% Similarity=0.170 Sum_probs=120.5
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEE----e-CC-cCeEEeccHHHHHHHH-HHcCcccC
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMH----L-GY-SPTLVVSSAEIAREII-KNHDIVFS 101 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~----~-~~-~~~vvv~dp~~ik~il-~~~~~~~~ 101 (254)
...+.||||+++|+. + . .+++..+.+| ++||||++++ + ++ .+.++++||+.+++|+ .++ .++
T Consensus 7 ~~~~lppgp~~~p~~-----~-~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~ 75 (406)
T 1ued_A 7 QVAPLLREPANFQLR-----T-N--CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFT 75 (406)
T ss_dssp SCCCEEECCTTTTCE-----E-T--TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEE
T ss_pred CCCCCcccCcccCCC-----C-C--CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccc
Confidence 346678999999875 4 5 7788999999 9999999999 6 78 8999999999999999 443 344
Q ss_pred CCCCcchhh-hhc---cCCceeeeCCCChHHHHHHHHHHHHHHH--------------------------------HHH-
Q 037570 102 NRPKTTAAN-VFL---YGCQDIGFSPYGEYWRQARKTCVLGLLN--------------------------------VIL- 144 (254)
Q Consensus 102 ~~~~~~~~~-~~~---~~~~~~~~~~~g~~w~~~R~~l~~~f~~--------------------------------~~~- 144 (254)
+++...... .+. ..+.++++.+ |+.|+++|+++.++|+. .+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~ 154 (406)
T 1ued_A 76 TRPQFTQSKSGAHVEAQFVGQISTYD-PPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFAD 154 (406)
T ss_dssp CCCCC---------CGGGTTCGGGCC-TTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHH
T ss_pred ccccccccccccccccccccccccCC-CHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHH
Confidence 444311110 111 0235677776 99999999999998876 344
Q ss_pred HHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHH
Q 037570 145 TVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEK 224 (254)
Q Consensus 145 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 224 (254)
.+++|+|+ .+||.+.+. ...+.+.+..++. . . ...++..++.+.+.+++.++|++
T Consensus 155 ~~~~~vi~-~~~G~~~~~-----~~~~~~~~~~~~~----~----~-----------~~~~~~~~~~~~~~~~~~~~i~~ 209 (406)
T 1ued_A 155 PVGAHALC-ELLGIPRDD-----QREFVRRIRRNAD----L----S-----------RGLKARAADSAAFNRYLDNLLAR 209 (406)
T ss_dssp HHHHHHHH-HHHTCCHHH-----HHHHHHHHHHCC----------------------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHH-HHcCCCHHH-----HHHHHHHHHHHHh----c----c-----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 48889988 468876432 1233333322111 0 0 01134567778889999999998
Q ss_pred HHhcCCCCCCCCCccHHHHhhccc
Q 037570 225 HRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 225 ~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
++++ ...|+++.|+++.
T Consensus 210 r~~~-------~~~d~l~~ll~~~ 226 (406)
T 1ued_A 210 QRAD-------PDDGLLGMIVRDH 226 (406)
T ss_dssp HHHS-------CCSSHHHHHHHHH
T ss_pred HHhC-------CCCCHHHHHHHhc
Confidence 8864 2368999999753
No 32
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.71 E-value=2.4e-16 Score=126.53 Aligned_cols=179 Identities=15% Similarity=0.133 Sum_probs=119.7
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhh-CCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKY-GPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
...+|+|+++|.+..-..+ . .+++..+.+| ++| |||+++++ ++.+.++|+||+.+++|+.++ .+++++....
T Consensus 4 ~~~~~~~~~~P~~~~~~~~-~--~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~ 77 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSC-P--YQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDN 77 (412)
T ss_dssp ----CCCCSSCBSSCCCSS-T--TSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTT
T ss_pred CCCCCCCCCCCCCCCCchh-c--cChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccc
Confidence 4567888888866433445 5 7889999999 788 99999997 889999999999999999754 2444332111
Q ss_pred hhh-------hccCCceeeeCCCChHHHHHHHHHHHHHHH--------------------------------HHH-HHHH
Q 037570 109 ANV-------FLYGCQDIGFSPYGEYWRQARKTCVLGLLN--------------------------------VIL-TVSN 148 (254)
Q Consensus 109 ~~~-------~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~--------------------------------~~~-~~~~ 148 (254)
... ....+.++++.+ |+.|+++|+++.+.|+. .+. .+++
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~ 156 (412)
T 2zbx_A 78 FPATSPRFEAVRESPQAFIGLD-PPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPS 156 (412)
T ss_dssp SCCCSGGGC----CCCCGGGCC-TTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHH
T ss_pred ccccccccccccccccccccCC-cHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 110 000234677776 99999999999998876 233 4778
Q ss_pred HHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 037570 149 NIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRIS 228 (254)
Q Consensus 149 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 228 (254)
|+++. +||.+.+.. ..+.+.+..++.. ... ++..++.+.+.+++.++|++++++
T Consensus 157 ~vi~~-~~G~~~~~~-----~~~~~~~~~~~~~-------------------~~~-~~~~~~~~~~~~~~~~~i~~r~~~ 210 (412)
T 2zbx_A 157 MVICR-LLGVPYADH-----EFFQDASKRLVQS-------------------TDA-QSALTARNDLAGYLDGLITQFQTE 210 (412)
T ss_dssp HHHHH-HHTCCGGGH-----HHHHHHHHHHHHC-------------------SSH-HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHH-HcCCCHHHH-----HHHHHHHHHHhcc-------------------CcH-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88886 688765422 2344433333210 011 455677788899999999988864
Q ss_pred CCCCCCCCCccHHHHhhcccc
Q 037570 229 GSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 229 ~~~~~~~~~~d~l~~ll~~~~ 249 (254)
...|+++.|+++.+
T Consensus 211 -------~~~d~l~~ll~~~~ 224 (412)
T 2zbx_A 211 -------PGAGLVGALVADQL 224 (412)
T ss_dssp -------CCSSHHHHHHHTTT
T ss_pred -------CCCCHHHHHHHhcc
Confidence 13689999998654
No 33
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.69 E-value=8.5e-17 Score=129.82 Aligned_cols=195 Identities=15% Similarity=0.105 Sum_probs=124.5
Q ss_pred CCCCCCCCCCCccccccccccCC-C-CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCC-
Q 037570 30 ELNLPPSPPRFPITGNLHQLLGT-A-TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPK- 105 (254)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~-~-~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~- 105 (254)
+.+.||| ++|++...... . .+++..+.++++ ||||++++. |+.+.+++++++.+++++++. ..|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 3567777 88876544110 0 135677888876 799999998 678999999999999999654 46777764
Q ss_pred cchh---h-h-h---cc----CCceeeeCCCChHHHHHHHHHHHHHHH--------------------------------
Q 037570 106 TTAA---N-V-F---LY----GCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------- 141 (254)
Q Consensus 106 ~~~~---~-~-~---~~----~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------- 141 (254)
.... . . + .+ .+.++++.+ |+.|+++||++++.|+.
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~ 155 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFMT 155 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEHHH
T ss_pred ccCCcccccchhccccccccccccccccCC-hHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehHH
Confidence 2221 1 1 2 21 135677777 99999999999999876
Q ss_pred H-HHHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHH
Q 037570 142 V-ILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQ 220 (254)
Q Consensus 142 ~-~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
. ...+++|+|+++ ||.+.+.. ..+.+....+...... ....+|++..+. ....++..++.+.+.+++.+
T Consensus 156 ~~~~~~~~~vi~~~-fG~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~P~l~~~~--~~~~~~~~~~~~~~~~~~~~ 225 (428)
T 1cpt_A 156 DCALYYPLHVVMTA-LGVPEDDE-----PLMLKLTQDFFGVHEP--DEQAVAAPRQSA--DEAARRFHETIATFYDYFNG 225 (428)
T ss_dssp HTTTTHHHHHHHHH-HTCCGGGH-----HHHHHHHHTTTCC--------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHH-cCCCHhHH-----HHHHHHHHHHHhcccc--cccccccccccc--hhhHHHHHHHHHHHHHHHHH
Confidence 2 246899999999 99977532 2343333322211110 112334443221 13335667788889999999
Q ss_pred HHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 221 VIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 221 ~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
+|++++++ ...|+++.|+++.+
T Consensus 226 ~i~~r~~~-------~~~dll~~ll~~~~ 247 (428)
T 1cpt_A 226 FTVDRRSC-------PKDDVMSLLANSKL 247 (428)
T ss_dssp HHHHHTTS-------CCSSHHHHHHHCBS
T ss_pred HHHHHHcC-------CCCcHHHHHHhccc
Confidence 99988753 23699999997654
No 34
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.68 E-value=2.6e-17 Score=134.54 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=74.5
Q ss_pred CCCCCCCCCC-CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCc-c
Q 037570 30 ELNLPPSPPR-FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKT-T 107 (254)
Q Consensus 30 ~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~-~ 107 (254)
+.+.||||++ +|++||++.+ . .+++..+.+++++||++|++++++.++++++||+.+++|+.++.. ++.++.. .
T Consensus 16 ~~~~pPgp~~~~P~iG~~~~~-~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~ 91 (475)
T 3b98_A 16 RRNEPPLDKGMIPWLGHALEF-G--KDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQV 91 (475)
T ss_dssp CTTCCCEECCSSTTTBTHHHH-H--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHH
T ss_pred CCCCCCCCCCCcchHHhHHHH-h--hCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHH
Confidence 3568899998 8999999988 6 678999999999999999999999999999999999999976532 3222111 1
Q ss_pred hhhhhccCCceeeeCCCChHHHHHHHHHHHHHHH
Q 037570 108 AANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN 141 (254)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~ 141 (254)
..... .+.++++.+ |+.| |+++.+.|+.
T Consensus 92 ~~~~~--~g~~~~~~~-~~~~---R~~~~~~f~~ 119 (475)
T 3b98_A 92 LMKRI--FNMILPSHN-PESE---KKRAEMHFQG 119 (475)
T ss_dssp HHHHT--TCCCCTTCC-HHHH---HHHHHHHTSH
T ss_pred HHHHH--hCCCCCCCC-hHHH---HHHHHHHcCh
Confidence 11111 245666555 7766 4555566654
No 35
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.67 E-value=2.9e-16 Score=125.80 Aligned_cols=176 Identities=14% Similarity=0.179 Sum_probs=119.3
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEe-CCcC-eEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHL-GYSP-TLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~-~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
.+.+|+|+++|+.++ . . .+++.++.+++ +||||+++++ +|.+ .++|+||+.+++|+.+ ..|.+++....
T Consensus 7 ~~~~~~~~~~p~~~~---~-~--~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~ 77 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---P-G--SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDR 77 (406)
T ss_dssp -CCSCCEEECCCCCC---C-T--TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTT
T ss_pred hhhccCCCCCCCCcc---c-c--cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCC
Confidence 345677777787766 3 4 77889998885 7999999996 6666 9999999999999975 35766643321
Q ss_pred hh----h-hccCCceeeeCCCChHHHHHHHHHHHHHHH--------------------------------HH-HHHHHHH
Q 037570 109 AN----V-FLYGCQDIGFSPYGEYWRQARKTCVLGLLN--------------------------------VI-LTVSNNI 150 (254)
Q Consensus 109 ~~----~-~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~--------------------------------~~-~~~~~dv 150 (254)
.. . ....+.++++.+ |+.|+++|+++.++|+. .+ ..+++|+
T Consensus 78 ~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v 156 (406)
T 1s1f_A 78 QVTRLAPHFIPARGAVGFLD-PPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAV 156 (406)
T ss_dssp TBCBSSSSCSSCTTSGGGCC-TTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHH
T ss_pred CcccccccccccccccccCC-chHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHHH
Confidence 11 1 111257788887 99999999999999976 22 3578888
Q ss_pred HHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037570 151 VSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGS 230 (254)
Q Consensus 151 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 230 (254)
|+. +||.+.+.. ..+.+....+..... | + ++..++.+.+.+++.++|++++++
T Consensus 157 i~~-~~G~~~~~~-----~~~~~~~~~~~~~~~--------~-----~------~~~~~~~~~~~~~~~~~i~~r~~~-- 209 (406)
T 1s1f_A 157 ICE-LMGVPATDR-----HSMHTWTQLILSSSH--------G-----A------EVSERAKNEMNAYFSDLIGLRSDS-- 209 (406)
T ss_dssp HHH-HHTCCGGGH-----HHHHHHHHHHHHHHT--------T-----C------CCCHHHHTHHHHHHHHHHHTSCCS--
T ss_pred HHH-HhCCCHHHH-----HHHHHHHHHHHhccC--------C-----H------HHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 888 588876532 234443333322110 1 0 123445667788888888876543
Q ss_pred CCCCCCCccHHHHhhccc
Q 037570 231 DDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 231 ~~~~~~~~d~l~~ll~~~ 248 (254)
...|+++.|+++.
T Consensus 210 -----~~~d~l~~ll~~~ 222 (406)
T 1s1f_A 210 -----AGEDVTSLLGAAV 222 (406)
T ss_dssp -----CCCSHHHHHHHHH
T ss_pred -----CCCCHHHHHHHhh
Confidence 2359999999764
No 36
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.67 E-value=9.8e-16 Score=123.03 Aligned_cols=181 Identities=13% Similarity=0.049 Sum_probs=123.1
Q ss_pred CCCCCCCCCCCCccc--cccccccCC--CCCCchHHHHHHHhhC--CeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCC
Q 037570 29 IELNLPPSPPRFPIT--GNLHQLLGT--ATLPHGSLQALSKKYG--PLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSN 102 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~--G~~~~~~~~--~~~~~~~~~~~~~~yG--~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~ 102 (254)
.+.+.||||++.|.. +.+-.+... ..+++..+.+|+ +|| ||++++..| +.++++||+.+++|+.+ ...|++
T Consensus 8 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~~ 84 (415)
T 2zwu_A 8 SNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFSS 84 (415)
T ss_dssp ---CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEET
T ss_pred CccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccCC
Confidence 457789999988864 433211010 146778888885 799 999998333 69999999999999964 446777
Q ss_pred CC-CcchhhhhccCCce-eeeCCCChHHHHHHHHHHHHHHH-------------------------------HH-HHHHH
Q 037570 103 RP-KTTAANVFLYGCQD-IGFSPYGEYWRQARKTCVLGLLN-------------------------------VI-LTVSN 148 (254)
Q Consensus 103 ~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~-~~~~~ 148 (254)
++ ......... +.+ +++.+ |+.|+++|+++.+.|+. .+ ..+++
T Consensus 85 ~~~~~~~~~~~~--~~~~l~~~~-g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~ 161 (415)
T 2zwu_A 85 ECPFIPREAGEA--YDFIPTSMD-PPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPI 161 (415)
T ss_dssp TSCSSSHHHHHH--CCCTTTTCC-TTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGTEEEHHHHTTTHHHH
T ss_pred CcccCCCCcccc--ccccCccCC-CcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 65 222221111 456 77776 99999999999999975 23 57999
Q ss_pred HHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 037570 149 NIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRIS 228 (254)
Q Consensus 149 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 228 (254)
|+|+.+ ||.+.+.. ..+.+.+..+... ..|. +..++.+.+.+++.++|++++++
T Consensus 162 ~vi~~~-~G~~~~~~-----~~~~~~~~~~~~~--------~~P~------------~~~~~~~~~~~~~~~~i~~r~~~ 215 (415)
T 2zwu_A 162 RIFMLL-AGLPEEDI-----PHLKYLTDQMTRP--------DGSM------------TFAEAKEALYDYLIPIIEQRRQK 215 (415)
T ss_dssp HHHHHH-HTCCGGGH-----HHHHHHHHHHHSC--------CSSS------------CHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHH-cCCCHHHH-----HHHHHHHHHHHhc--------cCHH------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 999998 99987532 3444444443321 0121 24456777889999999998864
Q ss_pred CCCCCCCCCccHHHHhhccc
Q 037570 229 GSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 229 ~~~~~~~~~~d~l~~ll~~~ 248 (254)
...|+++.|+++.
T Consensus 216 -------~~~dll~~ll~~~ 228 (415)
T 2zwu_A 216 -------PGTDAISIVANGQ 228 (415)
T ss_dssp -------CCSSHHHHHHTCE
T ss_pred -------CCCCHHHHHHHhh
Confidence 2369999999764
No 37
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.66 E-value=5.3e-16 Score=124.55 Aligned_cols=176 Identities=15% Similarity=0.105 Sum_probs=119.0
Q ss_pred CCCCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch
Q 037570 29 IELNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA 108 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~ 108 (254)
.+.+.+|||+ + . .+++..+.++++ |||| +.++.+.++++||+.+++|+.+. +.|++++....
T Consensus 16 ~pl~~~PGp~----------~-~--~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~ 77 (411)
T 2jjn_A 16 TTIDEVPGMA----------D-E--TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI 77 (411)
T ss_dssp -CCCSCCCSS----------C-H--HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS
T ss_pred CCCCCCCCcc----------c-c--cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC
Confidence 4566777876 1 2 456677888876 9998 56778899999999999999764 46777653221
Q ss_pred hhhhccCCceeeeCCCChHHHHHHHHHHHHHHH-----------------------------H-HHHHHHHHHHHHHhcc
Q 037570 109 ANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-----------------------------V-ILTVSNNIVSRSVLGR 158 (254)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-----------------------------~-~~~~~~dvi~~~~fG~ 158 (254)
......+.++++.+ |+.|+++|+++.++|+. . ...+++|+|+++ ||.
T Consensus 78 -~~~~~~~~~~~~~~-g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~d~~~~~~~~~~~~vi~~~-fG~ 154 (411)
T 2jjn_A 78 -EGASPTPGMIHEID-PPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVAEL-LGL 154 (411)
T ss_dssp -TTCCCCTTCGGGCC-TTHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHTSCSEEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred -CcccccccccccCC-chHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH-cCC
Confidence 11112356777777 99999999999999875 2 246899999998 999
Q ss_pred cccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 037570 159 RAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRK 238 (254)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 238 (254)
+.+.. ..+.+....+.... .|.+ +. +...++..++.+.+.+++.++|++++++ ...
T Consensus 155 ~~~~~-----~~~~~~~~~~~~~~--------~~~~--~~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~ 210 (411)
T 2jjn_A 155 PPMDH-----EQFGDWSGALVDIQ--------MDDP--TD--PALAERIADVLNPLTAYLKARCAERRAD-------PGD 210 (411)
T ss_dssp CSCCC-----STTCCHHHHHHHSC--------CSCT--TC--HHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCS
T ss_pred CHHHH-----HHHHHHHHHHHhcc--------Cccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCC
Confidence 87643 12222333333211 1110 10 1233456677888999999999998863 236
Q ss_pred cHHHHhhcccc
Q 037570 239 DLVHVYSNFKG 249 (254)
Q Consensus 239 d~l~~ll~~~~ 249 (254)
|+++.|+++.+
T Consensus 211 d~l~~ll~~~~ 221 (411)
T 2jjn_A 211 DLISRLVLAEV 221 (411)
T ss_dssp SHHHHHHHCCB
T ss_pred CHHHHHHhccc
Confidence 99999998653
No 38
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.65 E-value=1.1e-15 Score=122.31 Aligned_cols=161 Identities=14% Similarity=0.041 Sum_probs=115.0
Q ss_pred CCCchHHHHHHHhh--CCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHH
Q 037570 54 TLPHGSLQALSKKY--GPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQA 131 (254)
Q Consensus 54 ~~~~~~~~~~~~~y--G~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 131 (254)
.+++..+.+|+++| |||+++++++ +.++|+||+.+++|+ ++.+.|++++...........+.++++.+ |+.|+++
T Consensus 19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 95 (398)
T 4fb2_A 19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEFELMMAGQD-DPVHKKY 95 (398)
T ss_dssp SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----CCCTTTTCC-TTHHHHH
T ss_pred cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcccccCcccCC-chHHHHH
Confidence 78999999999999 9999999875 599999999999999 44556776654433122222234455555 9999999
Q ss_pred HHHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHH
Q 037570 132 RKTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRIL 179 (254)
Q Consensus 132 R~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 179 (254)
|+++.+.|+. ....+++++++. +||.+.+.. ..+.+.+..+.
T Consensus 96 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~~~~~~~ 169 (398)
T 4fb2_A 96 RQLVAKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAI-LLGLPPEDG-----DTYRRWVWAIT 169 (398)
T ss_dssp HHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHH-HTTSCGGGH-----HHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHHHHHHh
Confidence 9999998876 335788999988 688765432 34444444433
Q ss_pred HhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccccc
Q 037570 180 VQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKGM 250 (254)
Q Consensus 180 ~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 250 (254)
. +. ..++..++.+.+.+++.++|++++++ ...|+++.|+++.++
T Consensus 170 ~-----------~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~ 213 (398)
T 4fb2_A 170 H-----------VE---------NPEEGAEIFAELVAHARTLIAERRTN-------PGNDIMSRVIMSKID 213 (398)
T ss_dssp H-----------CC---------CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCBT
T ss_pred c-----------CC---------CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHcccC
Confidence 2 10 11256677788899999999998874 246999999987643
No 39
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.65 E-value=1.4e-15 Score=120.95 Aligned_cols=159 Identities=13% Similarity=0.056 Sum_probs=107.5
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCC----cCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGY----SPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWR 129 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~----~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~ 129 (254)
.+++..+.++ ++||||+++++++ .+.++|+||+.+++|+ ++...|++++...........+.+++..+ |+.|+
T Consensus 12 ~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~ 88 (384)
T 3oo3_A 12 LDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAYD-PPDHT 88 (384)
T ss_dssp TEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCCTTCGGGCC-TTHHH
T ss_pred cChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccccccccccCC-ChhHH
Confidence 7889999999 5999999999876 8999999999999999 44567877765433222222244555556 99999
Q ss_pred HHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHH
Q 037570 130 QARKTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRR 177 (254)
Q Consensus 130 ~~R~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~ 177 (254)
++|+++.+.|+. .+...+.+++...+||.+.+.. ..+.+.+..
T Consensus 89 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~-----~~~~~~~~~ 163 (384)
T 3oo3_A 89 RLRRTVAPAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ-----AELSRMIRE 163 (384)
T ss_dssp HHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-----HHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-----HHHHHHHHH
Confidence 999999998876 3344444555555667654322 233333333
Q ss_pred HHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 178 ILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 178 ~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
+.. ....++..++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 164 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~d~l~~ll~~ 206 (384)
T 3oo3_A 164 SRE--------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD-------PGDGMIGVIVRE 206 (384)
T ss_dssp HHH--------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHH
T ss_pred Hhc--------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh
Confidence 322 1123456677788899999999988763 246999999975
No 40
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.65 E-value=3e-15 Score=119.94 Aligned_cols=163 Identities=12% Similarity=0.133 Sum_probs=116.3
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchh---hh-hccCCceeeeCCCChHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAA---NV-FLYGCQDIGFSPYGEYWR 129 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~g~~w~ 129 (254)
.+++..+.++ ++||||+++++++.+.++++||+.+++|+.++ ..|++++..... .. ....+.++++.+ |+.|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQN-QPDHR 89 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCC-TTHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcC-CchHH
Confidence 5677888888 57999999999999999999999999999866 567666542211 01 111256787777 99999
Q ss_pred HHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHH
Q 037570 130 QARKTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRR 177 (254)
Q Consensus 130 ~~R~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~ 177 (254)
++||++.++|+. ....+++++++.+ ||.+.+.. ..+.+....
T Consensus 90 ~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-----~~~~~~~~~ 163 (404)
T 3ejb_B 90 RLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANI-IGVPEEDR-----EQLKEWAAS 163 (404)
T ss_dssp HHHHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-----HHHHHHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHH-cCCCHHHH-----HHHHHHHHH
Confidence 999999999876 3346889999985 89876532 334444444
Q ss_pred HHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhh
Q 037570 178 ILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYS 245 (254)
Q Consensus 178 ~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll 245 (254)
+...... |+. ....++..++.+.+.+++.++|++++++ ...|+++.|+
T Consensus 164 ~~~~~~~-------p~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll 211 (404)
T 3ejb_B 164 LIQTIDF-------TRS------RKALTEGNIMAVQAMAYFKELIQKRKRH-------PQQDMISMLL 211 (404)
T ss_dssp HHGGGST-------TCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHH
T ss_pred HHHhccC-------CCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CcchHHHHHH
Confidence 3322111 311 1234566778888999999999988853 3468999999
No 41
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.64 E-value=3.2e-15 Score=122.85 Aligned_cols=131 Identities=8% Similarity=0.048 Sum_probs=96.5
Q ss_pred CCCCCCCCCCCCcccccccccc----CCCCCCchHHHHHHHhhCC-eEEEEeCCcCe-------EEeccHHHHHHHHHHc
Q 037570 29 IELNLPPSPPRFPITGNLHQLL----GTATLPHGSLQALSKKYGP-LMYMHLGYSPT-------LVVSSAEIAREIIKNH 96 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------vvv~dp~~ik~il~~~ 96 (254)
.|.+.||||+++|++|++.++. . .++..++.+++++||+ ||++++++.++ ++++|++..+.++...
T Consensus 25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~--~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 25 LPIRNIPGNYGLPIVGPIKDRWDYFYD--QGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp CCBCCCCCCCCSTTHHHHHHHHHHHTT--SCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCccchHHHHHHHHHh--cCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 5677899999999999998774 4 6788999999999999 99999998888 6667777666665332
Q ss_pred C----cccCCCCCcchhhhhccC-CceeeeCCCChHHHHHHHHHHHHHHH------------------------------
Q 037570 97 D----IVFSNRPKTTAANVFLYG-CQDIGFSPYGEYWRQARKTCVLGLLN------------------------------ 141 (254)
Q Consensus 97 ~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~w~~~R~~l~~~f~~------------------------------ 141 (254)
. ..+........ ...... ..+++..+ |+.|+++|+++.+.|+.
T Consensus 103 ~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~-g~~h~~~R~~~~~~f~~~~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 180 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPST-ELTGGYRILSYLDPS-EPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKA 180 (495)
T ss_dssp TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTT-SHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHSSE
T ss_pred cccccccccccCCCCc-cccCCCcceeeeCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 1 11211111111 222111 13344445 99999999999999986
Q ss_pred ----HHHHHHHHHHHHHHhccccccc
Q 037570 142 ----VILTVSNNIVSRSVLGRRAEEE 163 (254)
Q Consensus 142 ----~~~~~~~dvi~~~~fG~~~~~~ 163 (254)
.+..++++++++++||.+.+..
T Consensus 181 dl~~~~~~~~~~~i~~~~~G~~~~~~ 206 (495)
T 3dsk_A 181 DFGGSSDGTAFNFLARAFYGTNPADT 206 (495)
T ss_dssp ESHHHHHHHHHHHHHHHHHSCCGGGS
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcchh
Confidence 7889999999999999988754
No 42
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.63 E-value=6e-16 Score=124.99 Aligned_cols=184 Identities=16% Similarity=0.106 Sum_probs=116.5
Q ss_pred CCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEE--------eCCcCeEEeccHHHHHHHHHHcCcccCCC
Q 037570 32 NLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMH--------LGYSPTLVVSSAEIAREIIKNHDIVFSNR 103 (254)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~--------~~~~~~vvv~dp~~ik~il~~~~~~~~~~ 103 (254)
..||.|.+.++++....- . .+++..+.++ ++||||+++. +|+.+.++|++++.+++|+++. ..|+++
T Consensus 18 ~~p~~~~~~~~~~~~~~~-~--~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~ 92 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYA-E--RLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSY 92 (433)
T ss_dssp --CCCCTTCCTTCHHHHT-T--CCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEEST
T ss_pred CCCCCCCCCCCCCHHHhh-c--CCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCC
Confidence 355666666665543322 3 5789999999 7899999998 4557999999999999999654 567666
Q ss_pred CCcchhh--------hhccCCceeeeCCCChHHHHHHHHHHHHHHH-------------------------------HH-
Q 037570 104 PKTTAAN--------VFLYGCQDIGFSPYGEYWRQARKTCVLGLLN-------------------------------VI- 143 (254)
Q Consensus 104 ~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~- 143 (254)
+...... .....+.++++.+ |+.|+++|+++++.|+. .+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~ 171 (433)
T 3ivy_A 93 ENGVIPRFKNDIAREDIEVQRFVMLNMD-APHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQVS 171 (433)
T ss_dssp TTCSCCCCCTTCCHHHHHGGGGSGGGCC-TTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHCEEEHHHHTT
T ss_pred cccccccccccccccccccccCCccccC-hHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeeHHHHHH
Confidence 5433221 1222356788777 99999999999999876 44
Q ss_pred HHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHH
Q 037570 144 LTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIE 223 (254)
Q Consensus 144 ~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 223 (254)
..+++++|+++ ||.+.+. ...+.+... .+.. ...|... . .+..++.+.+.+++.++|+
T Consensus 172 ~~~~~~vi~~l-~G~~~~~-----~~~~~~~~~----~~~~----~~~p~~~------~--~~~~~~~~~~~~~~~~~i~ 229 (433)
T 3ivy_A 172 CELPLQAIAGL-LGVPQED-----RGKLFHWSN----EMTG----NEDPEYA------H--IDPKASSAELIGYAMKMAE 229 (433)
T ss_dssp SHHHHHHHHHH-HTCCHHH-----HHHHHHHHT----TCSC----CCCGGGT------T--CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCHHH-----HHHHHHHHH----HHhc----cCCchhh------h--HHHHHHHHHHHHHHHHHHH
Confidence 88899999996 8864321 122222221 1111 1122211 0 1345667788899999998
Q ss_pred HHHhcCCCCCCCCCccHHHHhhccccc
Q 037570 224 KHRISGSDDDHPNRKDLVHVYSNFKGM 250 (254)
Q Consensus 224 ~~~~~~~~~~~~~~~d~l~~ll~~~~~ 250 (254)
+++++ ...|+++.|+++.++
T Consensus 230 ~r~~~-------~~~dll~~ll~~~~~ 249 (433)
T 3ivy_A 230 EKAKN-------PADDIVTQLIQADID 249 (433)
T ss_dssp HC--------------CHHHHHSCC--
T ss_pred HHhcC-------CCCcHHHHHHhhhcC
Confidence 87653 245899999986543
No 43
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.62 E-value=4.3e-15 Score=120.03 Aligned_cols=165 Identities=11% Similarity=0.094 Sum_probs=117.8
Q ss_pred CCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHHcCcccCCCCCc--c-hhhhhccCCceeeeCCC
Q 037570 55 LPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKNHDIVFSNRPKT--T-AANVFLYGCQDIGFSPY 124 (254)
Q Consensus 55 ~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 124 (254)
+++..+.+|+ +||||++++++ +.+.++|+||+.+++|+.+. ..|++++.. . ....+...+.++++.+
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d- 121 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD- 121 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC-
T ss_pred ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC-
Confidence 4667788886 68999999986 67899999999999999865 467776531 1 1122211256788887
Q ss_pred ChHHHHHHHHHHHHHHH----------------------------------HH-HHHHHHHHHHHHhcccccccchhhhh
Q 037570 125 GEYWRQARKTCVLGLLN----------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCN 169 (254)
Q Consensus 125 g~~w~~~R~~l~~~f~~----------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~ 169 (254)
|+.|+++|+++.++|+. .+ ..+++|+|+++ ||.+.+.. .
T Consensus 122 g~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~-----~ 195 (435)
T 2wm5_A 122 DPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKADH-----Q 195 (435)
T ss_dssp TTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----H
T ss_pred cHHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH-----H
Confidence 99999999999999865 23 57899999999 99987542 3
Q ss_pred HHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 170 KFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
.+.+....+.... .|.+. ...++..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 196 ~~~~~~~~~~~~~--------~p~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 254 (435)
T 2wm5_A 196 RIFHWTNVILGFG--------DPDLA------TDFDEFMQVSADIGAYATALAEDRRVN-------HHDDLTSSLVEAEV 254 (435)
T ss_dssp HHHHHHHHHHHTT--------CTTSC------CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCB
T ss_pred HHHHHHHHHhccC--------Ccchh------hhHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhhhc
Confidence 4555554444321 13211 122456778888999999999998874 23699999998753
No 44
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.62 E-value=1.1e-14 Score=116.58 Aligned_cols=160 Identities=15% Similarity=0.221 Sum_probs=111.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCC--c-chhhhhc--cCCceeeeCCCChH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPK--T-TAANVFL--YGCQDIGFSPYGEY 127 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~--~-~~~~~~~--~~~~~~~~~~~g~~ 127 (254)
.+++..+.+| ++||||+++++ ++.+.++++||+.+++|+.++ .|++++. . ....... ..+.++++.+ |+.
T Consensus 19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~ 94 (403)
T 3aba_A 19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQD-EPE 94 (403)
T ss_dssp TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCC-TTH
T ss_pred cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCC-chh
Confidence 6788889999 89999999997 889999999999999999764 4655532 1 1110011 1256777776 999
Q ss_pred HHHHHHHHHHHHHH--------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHHHH
Q 037570 128 WRQARKTCVLGLLN--------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFGEL 174 (254)
Q Consensus 128 w~~~R~~l~~~f~~--------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~ 174 (254)
|+++|++++++|+. .+ ..+++|+|+. +||.+.+.. ..+.+.
T Consensus 95 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~~ 168 (403)
T 3aba_A 95 HTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISD-LFGVPVERR-----AEFQDI 168 (403)
T ss_dssp HHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----HHHHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHH
Confidence 99999999999876 22 3577888887 688765422 233333
Q ss_pred HHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 175 SRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 175 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
+..+.. . ..| + ++..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 169 ~~~~~~----~----~~~---------p--~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 217 (403)
T 3aba_A 169 AEAMMR----V----DQD---------A--AATEAAGMRLGGLLYQLVQERRAN-------PGDDLISALITTED 217 (403)
T ss_dssp HHHHSB----S----SSC---------H--HHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCC
T ss_pred HHHHHh----c----cCc---------H--HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhcc
Confidence 322211 0 001 1 445667788899999999998864 13589999998754
No 45
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.61 E-value=1e-14 Score=117.25 Aligned_cols=161 Identities=14% Similarity=0.098 Sum_probs=114.7
Q ss_pred CCCchHHHHHHHhhCCeEEEEeC-CcCeEEeccHHHHHHHHHHcCcccCCCCCc---chhhhhc----cCCceeeeCCCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLG-YSPTLVVSSAEIAREIIKNHDIVFSNRPKT---TAANVFL----YGCQDIGFSPYG 125 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~-~~~~vvv~dp~~ik~il~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~g 125 (254)
.+++..+.+|+++ |||++++++ |.+.++|+||+.+++|+.++ .|++++.. ....... ..+.++++.+ |
T Consensus 29 ~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 104 (417)
T 3tyw_A 29 FAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD-A 104 (417)
T ss_dssp TSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC-H
T ss_pred cCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC-C
Confidence 7899999999998 999999987 58999999999999999765 56554321 1111100 1356788877 9
Q ss_pred hHHHHHHHHHHHHHHH--------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHH
Q 037570 126 EYWRQARKTCVLGLLN--------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFG 172 (254)
Q Consensus 126 ~~w~~~R~~l~~~f~~--------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 172 (254)
+.|+++|+++.+.|+. .+ ..+++++++.+ ||.+.+.. ..+.
T Consensus 105 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-----~~~~ 178 (417)
T 3tyw_A 105 PEHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDL-----EFFR 178 (417)
T ss_dssp HHHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT-----THHH
T ss_pred cHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH-----HHHH
Confidence 9999999999998876 34 56788888887 88877643 2333
Q ss_pred HHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccccc
Q 037570 173 ELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKGM 250 (254)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 250 (254)
+....+... .+ ..++..++.+.+.+++.++|++++++ ...|+++.|+++.++
T Consensus 179 ~~~~~~~~~---------~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~ 230 (417)
T 3tyw_A 179 DVTRISGSR---------NS----------TAEQVSEALGGLFGLLGGLVAERREE-------PRDDLISKLVTDHLV 230 (417)
T ss_dssp HHHHHHHSS---------SS----------CTTHHHHHHHHHHHHHHHHHHHHHSS-------CCSSHHHHHHHHTTT
T ss_pred HHHHHHhcc---------cC----------CHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHHhccc
Confidence 333322210 01 11345677788899999999988763 246999999987544
No 46
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.61 E-value=1.9e-15 Score=122.64 Aligned_cols=174 Identities=17% Similarity=0.090 Sum_probs=114.5
Q ss_pred CchHHHHHHHhhCCeE--EEE-eCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhh---------c----cCCcee
Q 037570 56 PHGSLQALSKKYGPLM--YMH-LGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVF---------L----YGCQDI 119 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~--~~~-~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~---------~----~~~~~~ 119 (254)
++..+.++ ++||||+ ++. +++.+.++|++++.+++|+++. ..|++++........ . ..+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 66777777 6789999 887 7788999999999999999665 567777643221110 0 023467
Q ss_pred eeCCCChHHHHHHHHHHHHHHH--------------------------------HH-HHHHHHHHHHHHhcccccccchh
Q 037570 120 GFSPYGEYWRQARKTCVLGLLN--------------------------------VI-LTVSNNIVSRSVLGRRAEEETAG 166 (254)
Q Consensus 120 ~~~~~g~~w~~~R~~l~~~f~~--------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~ 166 (254)
++.+ |+.|+++|+++++.|+. .+ ..+++++|+++ ||.+.+..
T Consensus 125 ~~~d-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~~--- 199 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQI-LGVPPEDE--- 199 (450)
T ss_dssp GGCC-TTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHH-TTCCGGGH---
T ss_pred ccCC-CHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHH-cCCChhHH---
Confidence 7777 99999999999999977 44 58899999986 89765432
Q ss_pred hhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhc
Q 037570 167 KCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSN 246 (254)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~ 246 (254)
..+.+..+.+..... ....++..++.......++..++.+.+.+++.++|++++++ ...|+++.|++
T Consensus 200 --~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~ 266 (450)
T 3tkt_A 200 --PKMLFLTQQMFGGQD----EDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN-------PTDDVATVIAN 266 (450)
T ss_dssp --HHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHT
T ss_pred --HHHHHHHHHHhcccc----chhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHh
Confidence 334444433321111 11223222222112345677788889999999999998875 24589999998
Q ss_pred ccc
Q 037570 247 FKG 249 (254)
Q Consensus 247 ~~~ 249 (254)
+.+
T Consensus 267 ~~~ 269 (450)
T 3tkt_A 267 AVV 269 (450)
T ss_dssp CEE
T ss_pred ccc
Confidence 754
No 47
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.60 E-value=1.7e-14 Score=116.18 Aligned_cols=166 Identities=15% Similarity=0.055 Sum_probs=113.3
Q ss_pred CCCchHHHHHHHhhC-CeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHH
Q 037570 54 TLPHGSLQALSKKYG-PLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQAR 132 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (254)
.+++.++.++++++| ||+++..++ +.++|+||+.+++|++ +...|++++...........+.++++.+ |+.|+++|
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~R 114 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPYR 114 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHHH
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCccCC-cHHHHHHH
Confidence 567888888887765 899998766 5899999999999994 4456777653222211112245666676 99999999
Q ss_pred HHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHH
Q 037570 133 KTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILV 180 (254)
Q Consensus 133 ~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 180 (254)
+++.+.|+. ....++.++++. +||.+.+.. ..+.+.+..+..
T Consensus 115 ~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~-----~~~~~~~~~~~~ 188 (421)
T 3lxh_A 115 KAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLA-LAGLPVEDA-----TKLGLLANEMTR 188 (421)
T ss_dssp HHHHHHHSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHH-HHTCCGGGH-----HHHHHHHHHHHS
T ss_pred HHHhhhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHHHHHHhc
Confidence 999999987 234567777775 478765432 344444444332
Q ss_pred hcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 181 QFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 181 ~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
.. ..+| ....++..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 189 ~~------~~~p--------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 236 (421)
T 3lxh_A 189 PS------GNTP--------EEQGRSLEAANKGFFEYVAPIIAARRGG-------SGTDLITRILNVEI 236 (421)
T ss_dssp CC------CSSH--------HHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTSCB
T ss_pred cc------cCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhc
Confidence 11 1111 1224567788889999999999988764 34699999998754
No 48
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.60 E-value=7.7e-15 Score=117.70 Aligned_cols=159 Identities=15% Similarity=0.180 Sum_probs=113.4
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchh-----hhhccCCceeeeCCCChHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAA-----NVFLYGCQDIGFSPYGEYW 128 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~w 128 (254)
.+++..+.+| ++|||++++++++.+.++|+||+.+++|+.++. |++++..... ......+.++++.+ |+.|
T Consensus 20 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h 95 (411)
T 3a4g_A 20 QNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMD-PPDH 95 (411)
T ss_dssp TCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TTHH
T ss_pred cCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCC-chHH
Confidence 7789999999 899999999999999999999999999997652 7666532211 11111356777776 9999
Q ss_pred HHHHHHHHHHHHH-------------------------------H-HHHHHHHHHHHHHhcccccccchhhhhHHHHHHH
Q 037570 129 RQARKTCVLGLLN-------------------------------V-ILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176 (254)
Q Consensus 129 ~~~R~~l~~~f~~-------------------------------~-~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~ 176 (254)
+++|+++.++|+. . ...+++|+|+.+ ||.+.+.. ..+.+.+.
T Consensus 96 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~-----~~~~~~~~ 169 (411)
T 3a4g_A 96 TRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICEL-LGVPAEDR-----DDFSAWSS 169 (411)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHH-HTCCGGGH-----HHHHHHHH
T ss_pred HHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHH-hCCCHHHH-----HHHHHHHH
Confidence 9999999998865 2 246889999975 89876532 23444333
Q ss_pred HHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 177 ~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
.+... .| + ++..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 170 ~~~~~---------~p-----~------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~ 215 (411)
T 3a4g_A 170 VLVDD---------SP-----A------DDKNAAMGKLHGYLSDLLERKRTE-------PDDALLSSLLAVSD 215 (411)
T ss_dssp HHTTS---------SC-----T------TTHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCC
T ss_pred HHhcc---------CC-----H------HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc
Confidence 32110 12 0 134566778889999999988864 13599999998754
No 49
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.59 E-value=3.4e-15 Score=119.76 Aligned_cols=158 Identities=12% Similarity=0.097 Sum_probs=104.6
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhh---hcc----CCceeeeCCCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANV---FLY----GCQDIGFSPYG 125 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~g 125 (254)
.+++..+.+| ++||||+++++ ++.+.++++||+.+++|+.++ .+++++....... +.. .+.++++.+ |
T Consensus 24 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g 99 (408)
T 3abb_A 24 YQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVD-D 99 (408)
T ss_dssp TSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTTCC-T
T ss_pred cCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccccCC-c
Confidence 7889999999 89999999997 888999999999999999754 2444332111110 110 124666666 9
Q ss_pred hHHHHHHHHHHHHHHH--------------------------------HHH-HHHHHHHHHHHhcccccccchhhhhHHH
Q 037570 126 EYWRQARKTCVLGLLN--------------------------------VIL-TVSNNIVSRSVLGRRAEEETAGKCNKFG 172 (254)
Q Consensus 126 ~~w~~~R~~l~~~f~~--------------------------------~~~-~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 172 (254)
+.|+++|+++.+.|+. .+. .+++|+|+. +||.+.+.. ..+.
T Consensus 100 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~ 173 (408)
T 3abb_A 100 PVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICE-LLGVPYGDH-----DFFE 173 (408)
T ss_dssp THHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----HHHH
T ss_pred hHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH-----HHHH
Confidence 9999999999999876 233 477888886 688765422 2333
Q ss_pred HHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 173 ELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
+.+..+... + .. ++..++.+.+.+++.++|++++++ ...|+++.|+++.
T Consensus 174 ~~~~~~~~~----------~---------~~-~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~ 222 (408)
T 3abb_A 174 ECSRNFVGA----------A---------TS-AEADAAFGELYTYLHGLVGRKQAE-------PEDGLLDELIARQ 222 (408)
T ss_dssp HHHHHHC--------------------------CCSSHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH
T ss_pred HHHHHHhcc----------c---------ch-HHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhcc
Confidence 333322110 0 00 223345667788899999988764 1368999999764
No 50
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.59 E-value=1.8e-14 Score=115.13 Aligned_cols=161 Identities=12% Similarity=0.081 Sum_probs=115.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK 133 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 133 (254)
.+++.++.++++ ||||+++. .+.++|+||+.+++|+.++. .|++++... .... .+.++++.+ |+.|+++|+
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R~ 88 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRRK 88 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHHH
T ss_pred cChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--ccccccccC-chHHHHHHH
Confidence 678888999988 99999663 48999999999999997643 576665432 1111 256777777 999999999
Q ss_pred HHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHh
Q 037570 134 TCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQ 181 (254)
Q Consensus 134 ~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 181 (254)
++.++|+. ....+++|+|+++ ||.+.+.. ..+.+....+...
T Consensus 89 ~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-----~~~~~~~~~~~~~ 162 (398)
T 2xkr_A 89 LVNAGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDM-LGVRPEQR-----DMFLRWSDDLVTF 162 (398)
T ss_dssp HHGGGSCHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----HHHHHHHHHHHHH
T ss_pred HhhhhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-----HHHHHHHHHHHhc
Confidence 99999876 2357999999998 99987532 3444444444432
Q ss_pred cccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 182 FVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 182 ~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
.. |.+ ++ ...++..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 163 ~~--------~~~--~p---~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 210 (398)
T 2xkr_A 163 LS--------SHV--SQ---EDFQITMDAFAAYNDFTRATIAARRAD-------PTDDLVSVLVSSEV 210 (398)
T ss_dssp HT--------SCC--CH---HHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCB
T ss_pred cC--------ccc--ch---hhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc
Confidence 11 211 11 223456677888999999999998863 24699999998754
No 51
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.59 E-value=2.5e-14 Score=114.55 Aligned_cols=159 Identities=17% Similarity=0.186 Sum_probs=115.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCc--c----h------h-hhh-ccCCcee
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKT--T----A------A-NVF-LYGCQDI 119 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~--~----~------~-~~~-~~~~~~~ 119 (254)
.+++..+.++ ++||||+++++++.+.++++||+.+++|+.++ .|++++.. . . . ... ...+.++
T Consensus 14 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 90 (404)
T 1z8o_A 14 VDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNM 90 (404)
T ss_dssp SSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSSG
T ss_pred cCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccccc
Confidence 6788899999 99999999999999999999999999999765 56666532 1 1 1 110 0025677
Q ss_pred eeCCCChHHHHHHHHHHHHHHH-------------------------------HH-HHHHHHHHHHHHhcccccccchhh
Q 037570 120 GFSPYGEYWRQARKTCVLGLLN-------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGK 167 (254)
Q Consensus 120 ~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~ 167 (254)
++.+ |+.|+++|++++++|+. .+ ..+++|+|+.+ ||.+.+..
T Consensus 91 ~~~~-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~---- 164 (404)
T 1z8o_A 91 GTSD-PPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICEL-LGVDEKYR---- 164 (404)
T ss_dssp GGCC-TTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHH-TTCCGGGT----
T ss_pred ccCC-CcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHHH-hCCCHHHH----
Confidence 7776 99999999999999876 23 47889999974 99876532
Q ss_pred hhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 168 CNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
..+.+.+..+.. . ..| . .++..++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 165 -~~~~~~~~~~~~-~-------~~p---------~-~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~ 218 (404)
T 1z8o_A 165 -GEFGRWSSEILV-M-------DPE---------R-AEQRGQAAREVVNFILDLVERRRTE-------PGDDLLSALIRV 218 (404)
T ss_dssp -TTHHHHHHHHHC-C-------CGG---------G-HHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHC
T ss_pred -HHHHHHHHHHhc-c-------CCh---------h-HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhh
Confidence 234444443332 1 001 1 3456677788999999999998864 135999999976
No 52
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.58 E-value=1.7e-14 Score=115.87 Aligned_cols=161 Identities=12% Similarity=0.147 Sum_probs=109.7
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCCc-chhhhhc--cCCceeeeCCCChHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPKT-TAANVFL--YGCQDIGFSPYGEYWR 129 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~g~~w~ 129 (254)
.+++..+.++ ++||||+++++ ++.+.++++||+.+++|+.++ .|.+++.. .....+. ..+.++++.+ |+.|+
T Consensus 37 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~ 112 (417)
T 2y5n_A 37 LTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMD-PPEHS 112 (417)
T ss_dssp CCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCC-TTHHH
T ss_pred cCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCC-chHHH
Confidence 6789999999 89999999997 899999999999999999754 45554322 1111111 1256777776 99999
Q ss_pred HHHHHHHHHHHH--------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHHHHHH
Q 037570 130 QARKTCVLGLLN--------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFGELSR 176 (254)
Q Consensus 130 ~~R~~l~~~f~~--------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~ 176 (254)
++|+++.++|+. .+ ..+++|+|+. +||.+.+.. ..+.+.+.
T Consensus 113 ~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~~~~ 186 (417)
T 2y5n_A 113 RLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICE-LLGVPSADH-----DRFTRWSG 186 (417)
T ss_dssp HHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-----HHHHHHHH
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH-----HHHHHHHH
Confidence 999999999876 22 2467777776 577765421 22222222
Q ss_pred HHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 177 RILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 177 ~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
.+ .. ... ...++..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 187 ~~----~~-----~~~---------~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 234 (417)
T 2y5n_A 187 AF----LS-----TAE---------VTAEEMQEAAEQAYAYMGDLIDRRRKE-------PTDDLVSALVQARD 234 (417)
T ss_dssp TT----ST-----TCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCB
T ss_pred HH----hc-----ccC---------CCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhc
Confidence 11 10 000 012356677788999999999998864 13599999998654
No 53
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.58 E-value=6.9e-15 Score=118.33 Aligned_cols=166 Identities=15% Similarity=0.156 Sum_probs=117.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCC-----cc-h--hhhhccC-CceeeeCCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPK-----TT-A--ANVFLYG-CQDIGFSPY 124 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~~ 124 (254)
.+++..+.++ ++||||++ + ++.+.++++||+.+++|+.++. |++++. .. . ...+... +.++++.+
T Consensus 26 ~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 99 (419)
T 1q5d_A 26 EDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP- 99 (419)
T ss_dssp TCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC-
T ss_pred hChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC-
Confidence 6788899998 78999999 5 7789999999999999997653 777651 11 1 1111101 45677776
Q ss_pred ChHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHH
Q 037570 125 GEYWRQARKTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFG 172 (254)
Q Consensus 125 g~~w~~~R~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 172 (254)
|+.|+++|+++.++|+. ....+++|+|+.+ ||.+.+.. ..+.
T Consensus 100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-----~~~~ 173 (419)
T 1q5d_A 100 PEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISAL-LKVPAECD-----EKFR 173 (419)
T ss_dssp HHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHH-TTCCGGGH-----HHHH
T ss_pred chHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH-----HHHH
Confidence 99999999999999976 2368899999998 99987532 3455
Q ss_pred HHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc-cHHHHhhccc
Q 037570 173 ELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRK-DLVHVYSNFK 248 (254)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-d~l~~ll~~~ 248 (254)
+..+.+...... ..+|+. ....++..++...+.+++.++|++++++ ... |+++.|+++.
T Consensus 174 ~~~~~~~~~~~~----~~~P~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dll~~ll~~~ 233 (419)
T 1q5d_A 174 RFGSATARALGV----GLVPRV------DEETKTLVASVTEGLALLHGVLDERRRN-------PLENDVLTMLLQAE 233 (419)
T ss_dssp HHHHHHHHHTTT----TTSSCC------CSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSCHHHHHHHHH
T ss_pred HHHHHHHHhccc----ccccCC------hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCCHHHHHHhhh
Confidence 555544443221 123322 1223456778888999999999998864 134 9999999764
No 54
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.57 E-value=4.3e-14 Score=114.35 Aligned_cols=165 Identities=16% Similarity=0.191 Sum_probs=103.3
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK 133 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 133 (254)
.++..++.++ ++||||+++..++ .++|++|+.+++|+.+.. .|++++......... ++.++++.+ |+.|+++|+
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~-~~~~l~~~d-g~~h~~~Rr 126 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM-RGPVLAQMH-GKEHSAKRR 126 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC-C--------------CCHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccccc-CCCccccCC-cHHHHHHHH
Confidence 5677777776 6899999987655 899999999999997664 376665433322222 223567776 999999999
Q ss_pred HHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHh
Q 037570 134 TCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQ 181 (254)
Q Consensus 134 ~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 181 (254)
++.+.|+. ....+++++++. +||.+.+.. ..+.+....+...
T Consensus 127 ~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----~~~~~~~~~~~~~ 200 (441)
T 3nc3_A 127 IVVRSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMD-MLGLDKRDH-----EKISEWHSGVADF 200 (441)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHH-HTTCCGGGH-----HHHHHHHHHHHHH
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHHHHHHHHh
Confidence 99999987 456799999998 589876432 3455555544443
Q ss_pred cccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 182 FVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 182 ~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
..... . + ....+...++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 201 ~~~~~---~-~--------~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~Dll~~Ll~~~~ 249 (441)
T 3nc3_A 201 ITSIS---Q-S--------PEARAHSLWCSEQLSQYLMPVIKERRVN-------PGSDLISILCTSEY 249 (441)
T ss_dssp HHCSC---C-C--------HHHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHCC---
T ss_pred ccccc---C-C--------hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc
Confidence 22110 0 1 1123456677788999999999988753 24699999998754
No 55
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.56 E-value=2.4e-14 Score=115.36 Aligned_cols=167 Identities=13% Similarity=0.081 Sum_probs=111.2
Q ss_pred CCCchHHHHHHHhhCCeEEEEeC--CcCeEEeccHHHHHHHHHHcCcccCCCCCc--------c-hhh-----hhccCCc
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLG--YSPTLVVSSAEIAREIIKNHDIVFSNRPKT--------T-AAN-----VFLYGCQ 117 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~--~~~~vvv~dp~~ik~il~~~~~~~~~~~~~--------~-~~~-----~~~~~~~ 117 (254)
.+++.++.++++ ||||+++++| +.+.++|+||+.+++|+.++ .|++++.. . ... .....+.
T Consensus 20 ~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 568888888865 9999999987 78899999999999999764 67766531 1 100 0011236
Q ss_pred eeeeCCCChHHHHHHHHHHHHHHH-------------------------------HH-HHHHHHHHHHHHhcccccccch
Q 037570 118 DIGFSPYGEYWRQARKTCVLGLLN-------------------------------VI-LTVSNNIVSRSVLGRRAEEETA 165 (254)
Q Consensus 118 ~~~~~~~g~~w~~~R~~l~~~f~~-------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~ 165 (254)
++++.+ |+.|+++|+++.++|+. .+ ..+++|+|+.+ ||.+.+..
T Consensus 97 ~l~~~d-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~-~G~~~~~~-- 172 (425)
T 2z3t_A 97 WLVFLD-PPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISAL-LGIPEEDH-- 172 (425)
T ss_dssp CGGGCC-HHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHH-HTCCGGGH--
T ss_pred ccccCC-chHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHH-hCCCHHHH--
Confidence 788887 99999999999999876 23 57899999998 99876532
Q ss_pred hhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhh
Q 037570 166 GKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYS 245 (254)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll 245 (254)
..+.+....+.... ..+| ++ ....++..++.+.+.+++.++|++++++ ...|+++.|+
T Consensus 173 ---~~~~~~~~~~~~~~------~~~~----~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll 230 (425)
T 2z3t_A 173 ---TWLRANAVALQEAS------TTRA----RD--GRGYARAEAASQEFTRYFRREVDRRGGD-------DRDDLLTLLV 230 (425)
T ss_dssp ---HHHHHHHHHHHTTC------TTCC----C-----HHHHHHHHHHHHHHHHHHHHCC--------------CHHHHHH
T ss_pred ---HHHHHHHHHHHhhc------cccC----CC--HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHH
Confidence 23444444333211 1112 11 1223556677788889999998877653 2468999999
Q ss_pred cccc
Q 037570 246 NFKG 249 (254)
Q Consensus 246 ~~~~ 249 (254)
++.+
T Consensus 231 ~~~~ 234 (425)
T 2z3t_A 231 RARD 234 (425)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 7643
No 56
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.55 E-value=2.7e-14 Score=114.86 Aligned_cols=168 Identities=17% Similarity=0.179 Sum_probs=114.2
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhc--------cCCceeeeCCCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFL--------YGCQDIGFSPYG 125 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g 125 (254)
.+++.++.++ ++||||+++.+| .++|+||+.+++|+.+. ..+++++......... ..+.++++.+ |
T Consensus 29 ~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 102 (418)
T 3r9b_A 29 ADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD-P 102 (418)
T ss_dssp TCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCC-T
T ss_pred cCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcC-C
Confidence 7889999888 578999987665 99999999999999653 3445554332222111 1246778887 9
Q ss_pred hHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHH
Q 037570 126 EYWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGEL 174 (254)
Q Consensus 126 ~~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~ 174 (254)
+.|+++|+++++.|+. ....++++++++ +||.+.+.. ..+.+.
T Consensus 103 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~~ 176 (418)
T 3r9b_A 103 PDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLDAVDGPEFNLIDNLAYPLPVAVICR-LLGVPIEDE-----PKFSRA 176 (418)
T ss_dssp THHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHHTCCSSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----HHHHHH
T ss_pred chHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHhhhccCCeehHHHHhCcCCHHHHHH-HcCCCHHHH-----HHHHHH
Confidence 9999999999999876 224788999999 899877543 334444
Q ss_pred HHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 175 SRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 175 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
...+...... .+.+.+++ ....++..++.+.+.+++.++|++++++ ...|+++.|+++.
T Consensus 177 ~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~~ 235 (418)
T 3r9b_A 177 SALLAAALDP------FLALTGET--SDLFDEQMKAGMWLRDYLRALIDERRRT-------PGEDLMSGLVAVE 235 (418)
T ss_dssp HHHHHHTTSC------HHHHHSSC--CTTHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSSHHHHHHHHH
T ss_pred HHHHHhhcCc------cccccccC--HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHHHhh
Confidence 4433322111 11111111 2344667788889999999999987753 2469999999764
No 57
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.55 E-value=3.3e-14 Score=114.14 Aligned_cols=174 Identities=17% Similarity=0.171 Sum_probs=110.6
Q ss_pred CCCCCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCCcchh
Q 037570 31 LNLPPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAA 109 (254)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~ 109 (254)
....+||.. |+- ..+ . .+++..+.+|+ +||||+++++ |+.+.++++||+.+++|+.+. .|++++.....
T Consensus 6 ~~~~~g~~~-~~~---~~~-~--~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~ 75 (413)
T 2z36_A 6 ADELAGLEL-PVE---RGC-P--FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGF 75 (413)
T ss_dssp ----CCCEE-CCC---CCB-T--TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTC
T ss_pred HHHhccccC-CCC---ccc-c--cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCc
Confidence 344566642 331 334 4 67889999997 7899999997 789999999999999999763 56665432111
Q ss_pred ------hhhcc---CCce-eeeCCCChHHHHHHHHHHHHHHH---------------------------------HH-HH
Q 037570 110 ------NVFLY---GCQD-IGFSPYGEYWRQARKTCVLGLLN---------------------------------VI-LT 145 (254)
Q Consensus 110 ------~~~~~---~~~~-~~~~~~g~~w~~~R~~l~~~f~~---------------------------------~~-~~ 145 (254)
..... .+.+ +++.+ |+.|+++|+++.++|+. .+ ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~ 154 (413)
T 2z36_A 76 PLFTLDAATLQQLRSQPPLMLGMD-GAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLP 154 (413)
T ss_dssp CCSSCCHHHHHHHTTSCCCGGGCC-HHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTH
T ss_pred cccccccccccccccccccccccC-chHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhh
Confidence 11110 2567 77776 99999999999999876 11 23
Q ss_pred HHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 037570 146 VSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKH 225 (254)
Q Consensus 146 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 225 (254)
+++++++.+ ||.+.+.. ..+......+ .. . ... ++..++.+.+.+++.++|+++
T Consensus 155 ~~~~vi~~~-~G~~~~~~-----~~~~~~~~~~----~~--------~-------~~~-~~~~~~~~~~~~~~~~~i~~r 208 (413)
T 2z36_A 155 VPSLVICEL-LGVPYTDH-----DFFQSRTTMM----VS--------R-------TSM-EDRRRAFAELRAYIDDLITRK 208 (413)
T ss_dssp HHHHHHHHH-HTCCGGGH-----HHHHHHHHHT----TC--------S-------SCH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHH-hCCCHHHH-----HHHHHHHHHH----hc--------c-------cCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 566666663 66554321 1222211110 00 0 001 455677788899999999988
Q ss_pred HhcCCCCCCCCCccHHHHhhccc
Q 037570 226 RISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 226 ~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
+++ ...|+++.|+++.
T Consensus 209 ~~~-------~~~dll~~ll~~~ 224 (413)
T 2z36_A 209 ESE-------PGDDLFSRQIARQ 224 (413)
T ss_dssp HSS-------CCSSHHHHHHHHH
T ss_pred HhC-------CCCCHHHHHHHhh
Confidence 754 2358999999763
No 58
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.54 E-value=6.3e-14 Score=114.46 Aligned_cols=130 Identities=14% Similarity=0.076 Sum_probs=90.1
Q ss_pred CCCCCCCCCCCCcccccccccc----CCCC-CCchHHHHHHHhhCC-eEEEEeCCc-------CeEEeccHHHHHHHHHH
Q 037570 29 IELNLPPSPPRFPITGNLHQLL----GTAT-LPHGSLQALSKKYGP-LMYMHLGYS-------PTLVVSSAEIAREIIKN 95 (254)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~----~~~~-~~~~~~~~~~~~yG~-i~~~~~~~~-------~~vvv~dp~~ik~il~~ 95 (254)
.|.+.+|||+++|++|++.++. . . +++.++.+++++||+ ||++++++. ..|+++|++..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~--~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~ 83 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYG--TGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDV 83 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHS--TTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHh--hcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCC
Confidence 5678899999999999998753 3 4 788899999999999 999998744 34444555444344421
Q ss_pred ----cCcccCCCCCcchhhhhccC-CceeeeCCCChHHHHHHHHHHHHHHH-----------------------------
Q 037570 96 ----HDIVFSNRPKTTAANVFLYG-CQDIGFSPYGEYWRQARKTCVLGLLN----------------------------- 141 (254)
Q Consensus 96 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~w~~~R~~l~~~f~~----------------------------- 141 (254)
+...+...... ........ ..+++..+ |+.|+++|+++.+.|+.
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~-~~~h~~~R~~~~~~f~~~~~~~~~~i~~~~~~ll~~~~~~~~~~~~ 161 (473)
T 3dan_A 84 SKVEKKDLFTGTYMP-STKLTGGYRVLSYLDPS-EPRHAQLKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGK 161 (473)
T ss_dssp TTEECSSCTTSSSCC-CGGGGTTSCCGGGCCTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cceeccccccccccC-CccccCCCcceeeeCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 11111111111 11111111 23445555 99999999999999886
Q ss_pred -----HHHHHHHHHHHHHHhcccccc
Q 037570 142 -----VILTVSNNIVSRSVLGRRAEE 162 (254)
Q Consensus 142 -----~~~~~~~dvi~~~~fG~~~~~ 162 (254)
.+..++++++++++||.+.+.
T Consensus 162 vdl~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 162 AAFNDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp EECHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 788999999999999999876
No 59
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.52 E-value=4.2e-14 Score=112.94 Aligned_cols=160 Identities=12% Similarity=0.026 Sum_probs=103.4
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK 133 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 133 (254)
.+++..+.+|+++ |||+++..++ +.++|+||+.+++|+.+. +.|++++...........+.++++.+ |+.|+++|+
T Consensus 24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~~R~ 99 (396)
T 3oft_A 24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKAFRT 99 (396)
T ss_dssp TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHHHHH
T ss_pred cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccC-CcHHHHHHH
Confidence 6789999999999 9999998874 589999999999999654 56777653221111111234556666 999999999
Q ss_pred HHHHHHHH--------HH------------------------HHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHh
Q 037570 134 TCVLGLLN--------VI------------------------LTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQ 181 (254)
Q Consensus 134 ~l~~~f~~--------~~------------------------~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 181 (254)
++.+.|+. .+ ..++.++++. +||.+.+.. ..+.+.+..+..
T Consensus 100 ~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~-----~~~~~~~~~~~~- 172 (396)
T 3oft_A 100 PVMKGLASRFVVALEPKVQAVARKLMESLRPRGSCDFVSDFAEILPLNIFLT-LIDVPLEDR-----PRLRQLGVQLTR- 172 (396)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTTHHHHHHHH-HTTCCGGGH-----HHHHHHHHHHHS-
T ss_pred HhhhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHHHHHHhC-
Confidence 99999976 11 2233444433 344332211 122222221110
Q ss_pred cccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccccc
Q 037570 182 FVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKGM 250 (254)
Q Consensus 182 ~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 250 (254)
....+...++.+.+.+++.++|++++++ ...|+++.|+++.++
T Consensus 173 -------------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~~ 215 (396)
T 3oft_A 173 -------------------PDGSMTVEQLKQAADDYLWPFIEKRMAQ-------PGDDLFSRILSEPVG 215 (396)
T ss_dssp -------------------CCSSCCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCBT
T ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhcc
Confidence 0012335667788899999999998875 246999999987543
No 60
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.52 E-value=5.6e-14 Score=112.25 Aligned_cols=162 Identities=15% Similarity=0.066 Sum_probs=111.2
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhh------hhccC-CceeeeCCCCh
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAAN------VFLYG-CQDIGFSPYGE 126 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~g~ 126 (254)
.+++.++.++ ++||||++ + |.+.++|+||+.+++|+.+ ..|++++...... ..... +.++++.+ |+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-EP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-TT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCC-ch
Confidence 4677777766 58999998 6 6889999999999999975 3565443211000 11111 46777777 99
Q ss_pred HHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHH
Q 037570 127 YWRQARKTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGEL 174 (254)
Q Consensus 127 ~w~~~R~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~ 174 (254)
.|+++|+++.+.|+. ....+++|+|+.+ ||.+.+.. ..+.+.
T Consensus 86 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~-----~~~~~~ 159 (397)
T 3buj_A 86 DHGRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGL-LGLPAADW-----GAVGRW 159 (397)
T ss_dssp HHHHHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-----HHHHHH
T ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHH-hCCCHHHH-----HHHHHH
Confidence 999999999998875 3467899999998 99987542 334444
Q ss_pred HHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 175 SRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 175 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
...+...... + ++ ....++..++.+.+.+++.++|++++++ ...|+++.|+++.
T Consensus 160 ~~~~~~~~~~-------~----~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~ 213 (397)
T 3buj_A 160 SRDVGRTLDR-------G----AS--AEDMRRGHAAIAEFADYVERALARRRRE-------GGEDLLALMLDAH 213 (397)
T ss_dssp HHHHHGGGCS-------S----CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCCSHHHHHHHHH
T ss_pred HHHHHhhcCC-------C----CC--hHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCCCHHHHHHHhh
Confidence 4443332110 0 11 1223456677888999999999998875 1359999999764
No 61
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.52 E-value=3.4e-14 Score=113.94 Aligned_cols=160 Identities=13% Similarity=0.198 Sum_probs=108.8
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCC--cchhhhhc--------cCCceeeeCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPK--TTAANVFL--------YGCQDIGFSP 123 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~--~~~~~~~~--------~~~~~~~~~~ 123 (254)
.+++..+.+| ++||||+++++++.+.++++||+.+++|+.++. +++++. ........ ..+.++++.+
T Consensus 15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (408)
T 1odo_A 15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAY 91 (408)
T ss_dssp TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCC
T ss_pred CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccccccC
Confidence 7788899999 999999999998899999999999999997543 333321 11000000 0135677766
Q ss_pred CChHHHHHHHHHHHHHHH----------------------------------HHH-HHHHHHHHHHHhcccccccchhhh
Q 037570 124 YGEYWRQARKTCVLGLLN----------------------------------VIL-TVSNNIVSRSVLGRRAEEETAGKC 168 (254)
Q Consensus 124 ~g~~w~~~R~~l~~~f~~----------------------------------~~~-~~~~dvi~~~~fG~~~~~~~~~~~ 168 (254)
|+.|+++|+++.++|+. .+. .+++|+|+. +||.+.+. .
T Consensus 92 -g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----~ 164 (408)
T 1odo_A 92 -GPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-----R 164 (408)
T ss_dssp -HHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-----H
T ss_pred -ChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-----H
Confidence 99999999999999876 233 477888885 68876432 1
Q ss_pred hHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 169 NKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
..+.+.+..++.. . ...++..++.+.+.+++.++|++++++ ...|+++.|+++.
T Consensus 165 ~~~~~~~~~~~~~-------~------------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~ 218 (408)
T 1odo_A 165 DGFRALVDGVFDT-------T------------LDQAEAQANTARLYEVLDQLIAAKRAT-------PGDDMTSLLIAAR 218 (408)
T ss_dssp HHHHHHHHHHHCT-------T------------CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-------c------------CCHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHHhc
Confidence 2333333333210 0 011345667778899999999988764 1368999999765
Q ss_pred c
Q 037570 249 G 249 (254)
Q Consensus 249 ~ 249 (254)
+
T Consensus 219 ~ 219 (408)
T 1odo_A 219 D 219 (408)
T ss_dssp C
T ss_pred c
Confidence 4
No 62
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.50 E-value=4.2e-14 Score=113.44 Aligned_cols=158 Identities=15% Similarity=0.131 Sum_probs=107.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCC--cCeEEeccHHHHHHHHHHcCcccCCCCCcch----hhhhccC-CceeeeCCCCh
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGY--SPTLVVSSAEIAREIIKNHDIVFSNRPKTTA----ANVFLYG-CQDIGFSPYGE 126 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~--~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~g~ 126 (254)
++++..+.+++ +||||+++.+++ .+.+++++|+.+++|+.+ ..|.+++.... ....... +.++++.+ |+
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 102 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFAD-QP 102 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCC-TT
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCC-ch
Confidence 66778898887 799999999764 789999999999999965 35655433211 1111111 56777776 99
Q ss_pred HHHHHHHHHHHHHHH--------------------------------HHH-HHHHHHHHHHHhcccccccchhhhhHHHH
Q 037570 127 YWRQARKTCVLGLLN--------------------------------VIL-TVSNNIVSRSVLGRRAEEETAGKCNKFGE 173 (254)
Q Consensus 127 ~w~~~R~~l~~~f~~--------------------------------~~~-~~~~dvi~~~~fG~~~~~~~~~~~~~~~~ 173 (254)
.|+++|++++++|+. .+. .+++|+|+. +||.+.+.. ..+.+
T Consensus 103 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----~~~~~ 176 (411)
T 2dkk_A 103 DHNRLRRAVAGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSE-VMGVPAADR-----ERVHS 176 (411)
T ss_dssp HHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH-----HHHHH
T ss_pred HHHHHHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH-----HHHHH
Confidence 999999999998876 333 588899988 488876432 22222
Q ss_pred HHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 174 LSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
... .+.. ..+ ..++..++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 177 ~~~----~~~~-----~~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~dll~~ll~~ 224 (411)
T 2dkk_A 177 WTR----QIIS-----TSG----------GAEAAERAKRGLYGWITETVRARAGS-------EGGDVYSMLGAA 224 (411)
T ss_dssp HHG----GGCS-----SCS----------CSHHHHHHHHHHHHHHHHHHHTTTTC-------CSSCHHHHHHHH
T ss_pred HHH----HHHh-----ccc----------hHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh
Confidence 211 1111 111 12345677778889999999887643 235999999976
No 63
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.50 E-value=3.5e-13 Score=107.77 Aligned_cols=153 Identities=10% Similarity=0.120 Sum_probs=106.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCCcc-hhhhhccCCce--eeeCCCC----
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT-AANVFLYGCQD--IGFSPYG---- 125 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~g---- 125 (254)
.+++..+.++ ++||||+++++ ++.+.++|+||+.+++|+.++ .|.+++... ...... .+.+ +++.+ |
T Consensus 26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~-g~~~~ 100 (404)
T 2xbk_A 26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISD-ADAES 100 (404)
T ss_dssp TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBC-SCHHH
T ss_pred cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeC-CCCCC
Confidence 6788899999 89999999997 789999999999999999764 465554322 111111 2455 77776 9
Q ss_pred --hHHHHHHHHHHHHHHH--------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhH
Q 037570 126 --EYWRQARKTCVLGLLN--------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNK 170 (254)
Q Consensus 126 --~~w~~~R~~l~~~f~~--------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~ 170 (254)
+.|+++|+++.++|+. .+ ..+++++++. +||.+.+.. ..
T Consensus 101 ~~~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~ 174 (404)
T 2xbk_A 101 GRRQHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCE-VIGVPPQRR-----AE 174 (404)
T ss_dssp HHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHH-HHTCCGGGH-----HH
T ss_pred CCchHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-HhCCCHHHH-----HH
Confidence 9999999999999876 23 4578888886 688765422 23
Q ss_pred HHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHh
Q 037570 171 FGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVY 244 (254)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 244 (254)
+.+.+..+... ..| + +..++.+.+.+++.++|++++++ ...|+++.|
T Consensus 175 ~~~~~~~~~~~--------~~~---------p---~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~l 221 (404)
T 2xbk_A 175 LTTLLAGIAKL--------DDR---------E---GAVRAQDDLFGYVAGLVEHKRAE-------PGPDIISRL 221 (404)
T ss_dssp HHHHHHHHTBS--------SCH---------H---HHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHH
T ss_pred HHHHHHHHHhc--------cCc---------H---HHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHh
Confidence 33333322110 001 1 45567778899999999988864 135888887
No 64
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.49 E-value=3.4e-13 Score=108.15 Aligned_cols=160 Identities=15% Similarity=0.164 Sum_probs=110.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCC-Ccchhh--hhc--------cC-Cceee
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRP-KTTAAN--VFL--------YG-CQDIG 120 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~-~~~~~~--~~~--------~~-~~~~~ 120 (254)
.+++..+.++ ++||||+++++ ++.+.++++||+.+++|+.++. +++++ ...... ... .. +.+++
T Consensus 17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (411)
T 1gwi_A 17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSML 93 (411)
T ss_dssp SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGG
T ss_pred CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccc
Confidence 6788889999 99999999998 8899999999999999997543 33332 111000 000 02 35677
Q ss_pred eCCCChHHHHHHHHHHHHHHH--------------------------------HHH-HHHHHHHHHHHhcccccccchhh
Q 037570 121 FSPYGEYWRQARKTCVLGLLN--------------------------------VIL-TVSNNIVSRSVLGRRAEEETAGK 167 (254)
Q Consensus 121 ~~~~g~~w~~~R~~l~~~f~~--------------------------------~~~-~~~~dvi~~~~fG~~~~~~~~~~ 167 (254)
+.+ |+.|+++|+++.++|+. .+. .+++|+|+. +||.+.+..
T Consensus 94 ~~~-g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~---- 167 (411)
T 1gwi_A 94 TVD-GAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVAD-LMGIEEARL---- 167 (411)
T ss_dssp GCC-HHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHH-HHTCCGGGH----
T ss_pred cCC-cHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHH-HhCCCHHHH----
Confidence 776 99999999999998876 233 488889885 688875422
Q ss_pred hhHHHHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 168 CNKFGELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
..+.+.+..++.. . ...++..++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 168 -~~~~~~~~~~~~~-------~------------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~ 220 (411)
T 1gwi_A 168 -PRLKVLFEKFFST-------Q------------TPPEEVVATLTELASIMTDTVAAKRAA-------PGDDLTSALIQA 220 (411)
T ss_dssp -HHHHHHHHHHHCT-------T------------SCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHC
T ss_pred -HHHHHHHHHHhcc-------C------------CChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHh
Confidence 3344444333220 0 001345667778899999999988764 136899999986
Q ss_pred cc
Q 037570 248 KG 249 (254)
Q Consensus 248 ~~ 249 (254)
.+
T Consensus 221 ~~ 222 (411)
T 1gwi_A 221 SE 222 (411)
T ss_dssp CB
T ss_pred cc
Confidence 54
No 65
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.49 E-value=1.6e-13 Score=110.13 Aligned_cols=161 Identities=15% Similarity=0.127 Sum_probs=111.2
Q ss_pred CCCchHHHHHHHhhCCeE-----EEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcc-hhh--hh-c-cCCceeeeCC
Q 037570 54 TLPHGSLQALSKKYGPLM-----YMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT-AAN--VF-L-YGCQDIGFSP 123 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~-----~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~~ 123 (254)
.+++..+.++. +||||+ ++++ .+.++|+||+.+++|+.++ ..|++++... ... .+ . ..+.++++.+
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD 100 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence 57888888885 689999 7765 6899999999999999875 5677765432 111 22 1 2367888887
Q ss_pred CChHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHH
Q 037570 124 YGEYWRQARKTCVLGLLN--------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKF 171 (254)
Q Consensus 124 ~g~~w~~~R~~l~~~f~~--------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~ 171 (254)
|+.|+++|+++.++|+. .+..+++|+|+. +||.+.+.. ..+
T Consensus 101 -g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~ 173 (414)
T 2uuq_A 101 -PPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAH-YLGVPEEDW-----TQF 173 (414)
T ss_dssp -TTHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHH-HTTCCGGGH-----HHH
T ss_pred -chhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHH-HhCCCHHHH-----HHH
Confidence 99999999999998876 235889999998 699887532 234
Q ss_pred HHHHHHHHHhcccCCccccc-cccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 172 GELSRRILVQFVSFSFGDML-PYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~-p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
.+....+... ..+ |.. .+..++.+.+.+++.++|++++++ ...|+++.|+++.+
T Consensus 174 ~~~~~~~~~~-------~~~~p~~----------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~ 228 (414)
T 2uuq_A 174 DGWTQAIVAA-------NAVDGAT----------TGALDAVGSMMAYFTGLIERRRTE-------PADDAISHLVAAGV 228 (414)
T ss_dssp HHHHHHHHHH-------HHC---------------CCHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHHHTTT
T ss_pred HHHHHHHHhh-------cccCCch----------hHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhccc
Confidence 4444333321 011 210 123456667888999999888753 23699999997753
No 66
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.45 E-value=2.8e-13 Score=108.78 Aligned_cols=162 Identities=17% Similarity=0.099 Sum_probs=110.0
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCC--cCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhh---ccC-CceeeeCCCChH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGY--SPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVF---LYG-CQDIGFSPYGEY 127 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~--~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~g~~ 127 (254)
.+++..+.++++ ||||+++...| .+.++|++++.+++|+++. ..|++++........ ... +.++++.+ |+.
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 113 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HEQ 113 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccC-cHH
Confidence 578888888887 99999987445 7899999999999999543 457666543222111 111 45566666 999
Q ss_pred HHHHHHHHHHHHHH-------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHHHHH
Q 037570 128 WRQARKTCVLGLLN-------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFGELS 175 (254)
Q Consensus 128 w~~~R~~l~~~f~~-------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~ 175 (254)
|+++|+++.++|+. .+ ..+++++|+. +||.+.+. ...+.+..
T Consensus 114 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-----~~~~~~~~ 187 (415)
T 3mgx_A 114 HRKLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCE-ILGVPAED-----EDMLIDLT 187 (415)
T ss_dssp HHHHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHH-HHTCCGGG-----HHHHHHHH
T ss_pred HHHHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HcCCCHHH-----HHHHHHHH
Confidence 99999999999876 44 6799999998 58876432 23444444
Q ss_pred HHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 176 RRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 176 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
+.+..... ....| .. ..++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 188 ~~~~~~~~----~~~~~--------~~----~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~ll~~ 236 (415)
T 3mgx_A 188 NHAFGGED----ELFDG--------MT----PRQAHTEILVYFDELITARRKE-------PGDDLVSTLVTD 236 (415)
T ss_dssp HHHTSCCC--------C--------CC----HHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHC
T ss_pred HHHHcccC----cccch--------HH----HHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhC
Confidence 44332111 01111 01 1256778889999999998875 246899999875
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.41 E-value=5.7e-13 Score=106.45 Aligned_cols=154 Identities=14% Similarity=0.192 Sum_probs=97.7
Q ss_pred HHHHHHhhCCeEEEEeC-Cc---CeEEeccHHHHHHHHHHcCcccCCCCC------cchhhhh--ccCCceeeeCCCChH
Q 037570 60 LQALSKKYGPLMYMHLG-YS---PTLVVSSAEIAREIIKNHDIVFSNRPK------TTAANVF--LYGCQDIGFSPYGEY 127 (254)
Q Consensus 60 ~~~~~~~yG~i~~~~~~-~~---~~vvv~dp~~ik~il~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~g~~ 127 (254)
+.+|+++ |||++++++ |. +.++|+||+.+++|+.++. .|++++. ....... ...+.++++.+ |+.
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~ 95 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYD-PPE 95 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGGCC-TTH
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccccC-CHH
Confidence 3457776 999999875 55 8999999999999994332 4666553 1111111 11256777777 999
Q ss_pred HHHHHHHHHHHHHH--------------------------------HHHH-HHHHHHHHHHhcccccccchhhhhHHHHH
Q 037570 128 WRQARKTCVLGLLN--------------------------------VILT-VSNNIVSRSVLGRRAEEETAGKCNKFGEL 174 (254)
Q Consensus 128 w~~~R~~l~~~f~~--------------------------------~~~~-~~~dvi~~~~fG~~~~~~~~~~~~~~~~~ 174 (254)
|+++|+++.+.|+. .+.. +++++++. +||.+.+.. ..+.+.
T Consensus 96 ~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~~ 169 (398)
T 1lfk_A 96 HTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCE-LVGVPRDDR-----DMFMKL 169 (398)
T ss_dssp HHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-----HHHHHH
T ss_pred HHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-----HHHHHH
Confidence 99999999999876 3333 67777776 477765421 223332
Q ss_pred HHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 175 SRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 175 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
+..++ . . ....++..++.+.+.+++.++|++++++ ...|+++.|+++.
T Consensus 170 ~~~~~----~-----~----------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~ 217 (398)
T 1lfk_A 170 CHGHL----D-----A----------SLSQKRRAALGDKFSRYLLAMIARERKE-------PGEGMIGAVVAEY 217 (398)
T ss_dssp HHHTT----C-----T----------TSCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH
T ss_pred HHHHH----h-----c----------ccchHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhc
Confidence 22211 0 0 1112456677788999999999998864 1359999999753
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.39 E-value=1e-11 Score=100.04 Aligned_cols=170 Identities=11% Similarity=0.064 Sum_probs=110.9
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccCCCCC---cchhh-----h-hccCCceeeeCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFSNRPK---TTAAN-----V-FLYGCQDIGFSP 123 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~~ 123 (254)
.+++..+.+++++ |||+++.. ++.+.++|++++.+++|+.+. ..|++++. ..... . ....+.++++.+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence 5688888898876 99999987 467899999999999999765 34555431 11111 0 111245666776
Q ss_pred CChHHHHHHHHHHHHHHH-------------------------------H-HHHHHHHHHHHHHhcccccccchhhhhHH
Q 037570 124 YGEYWRQARKTCVLGLLN-------------------------------V-ILTVSNNIVSRSVLGRRAEEETAGKCNKF 171 (254)
Q Consensus 124 ~g~~w~~~R~~l~~~f~~-------------------------------~-~~~~~~dvi~~~~fG~~~~~~~~~~~~~~ 171 (254)
|+.|+++|+++++.|+. . ...+++++++. +||.+.+.. ..+
T Consensus 116 -g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----~~~ 188 (426)
T 3rwl_A 116 -RPRHDEQRKAVSPIVAPANLAALEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLAT-LFDFPFEER-----RKL 188 (426)
T ss_dssp -TTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT-----HHH
T ss_pred -chHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHH-HcCCCHHHH-----HHH
Confidence 99999999999999876 3 36788888886 799765432 223
Q ss_pred HHHHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccccc
Q 037570 172 GELSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKGMA 251 (254)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~ 251 (254)
.+..+.+ .... .+.. ....+...++.+.+.+++.++|+++++. +...|+++.|+++.+++
T Consensus 189 ~~~~~~~----~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~~dll~~ll~~~~~~ 248 (426)
T 3rwl_A 189 TRWSDVT----TAAP----GGGV------VESWDQRKTELLECAAYFQVLWNERVNK------DPGNDLISMLAHSPATR 248 (426)
T ss_dssp HHHHHHH----TCCT----TSSS------CSSHHHHHHHHHHHHHHHHHHHHHHHTS------CCCSSHHHHHHHCGGGG
T ss_pred HHHHHHH----Hhcc----Cccc------cccHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCCHHHHHHhcccCC
Confidence 3222211 1100 0100 1223445567788899999999988432 33579999999876544
Q ss_pred C
Q 037570 252 C 252 (254)
Q Consensus 252 ~ 252 (254)
+
T Consensus 249 ~ 249 (426)
T 3rwl_A 249 N 249 (426)
T ss_dssp G
T ss_pred C
Confidence 3
No 69
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.29 E-value=8.3e-12 Score=98.61 Aligned_cols=154 Identities=13% Similarity=0.099 Sum_probs=102.4
Q ss_pred chHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCC-cc-hh-----h-hhccC--CceeeeCCCCh
Q 037570 57 HGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPK-TT-AA-----N-VFLYG--CQDIGFSPYGE 126 (254)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~~~~~~~g~ 126 (254)
+..+.++ ++||||+++. | .++++||+.+++|+.+. +.|++++. .. .. . .+... +.++++.+ |+
T Consensus 2 ~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 74 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD-PP 74 (367)
T ss_dssp HHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC-TT
T ss_pred CHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC-ch
Confidence 3456666 4799999887 3 89999999999999865 36766642 11 11 1 12110 26788887 99
Q ss_pred HHHHHHHHHHHHHHH---------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHHHHHHHH
Q 037570 127 YWRQARKTCVLGLLN---------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRI 178 (254)
Q Consensus 127 ~w~~~R~~l~~~f~~---------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~ 178 (254)
.|+++|++++++|+. .+ ..+++|+|+. +||.+ +.. ..+.+..+.+
T Consensus 75 ~h~~~R~~~~~~fs~~~l~~~~i~~~~~~l~~~l~g~~d~~~~~~~~~~~~vi~~-~~G~~-~~~-----~~~~~~~~~~ 147 (367)
T 3b4x_A 75 LHDELRNLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISK-MLGIN-PDV-----KKVKDWSDLV 147 (367)
T ss_dssp HHHHHHHTTGGGGSGGGSCHHHHHHHHHHHHHTCCSEEEHHHHTTTHHHHHHHHH-HHTCC-CCH-----HHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCHhhhcchHHHHHHHHHHHhccCCcchHHHHHHhhHHHHHHH-HcCCC-CcH-----HHHHHHHHHH
Confidence 999999999998863 23 5789999999 79998 422 3444444444
Q ss_pred HHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 179 LVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 179 ~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
..... ..|.. .+.. ++.+.+.+++.++|++++++ ...|+++.|+++
T Consensus 148 ~~~~~------~~p~~---------~~~~-~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~ 193 (367)
T 3b4x_A 148 ALRLG------RADEI---------FSIG-RKYLELISFSKKELDSRKGK-------EIVDLTGKIANS 193 (367)
T ss_dssp HTTTT------STTGG---------GCCC-HHHHHHHHHHHHHHHHHTTT-------CCSSHHHHHHTS
T ss_pred HhccC------CChhh---------HHHH-HHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhc
Confidence 33211 12211 1112 56667888999999888753 246899999865
No 70
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.28 E-value=1.1e-11 Score=98.87 Aligned_cols=155 Identities=13% Similarity=0.113 Sum_probs=102.5
Q ss_pred CCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCcccC-C-CCCc--chhh--hhcc-CCceeeeCCCC
Q 037570 54 TLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDIVFS-N-RPKT--TAAN--VFLY-GCQDIGFSPYG 125 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~~g 125 (254)
.+++..+.+| ++||||+++++ ++.+.++++||+.+++|+.++ .|. + ++.. .... .+.. .+.++++.
T Consensus 16 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 89 (396)
T 1n40_A 16 DRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI--- 89 (396)
T ss_dssp SSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH---
T ss_pred cCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH---
Confidence 6789999999 99999999997 789999999999999999754 354 4 3321 1110 0110 14556554
Q ss_pred hHHHHHHHHHHHHHHH-------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHHH
Q 037570 126 EYWRQARKTCVLGLLN-------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFGE 173 (254)
Q Consensus 126 ~~w~~~R~~l~~~f~~-------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~ 173 (254)
.|+++|+++.+.|+. .+ ..+++|+|+. +||.+.+.. ..+.+
T Consensus 90 -~h~~~R~~~~~~fs~~~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~ 162 (396)
T 1n40_A 90 -ADAGLRKAVMKAITPKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCK-VLGIPQEDG-----PKLFR 162 (396)
T ss_dssp -HHTTCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHH-HHTCCGGGH-----HHHHH
T ss_pred -HHHHHHHHHHHhhChHHHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHH-HhCCChhhH-----HHHHH
Confidence 999999999998853 23 4788999998 799876432 33444
Q ss_pred HHHHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccc
Q 037570 174 LSRRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFK 248 (254)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 248 (254)
.+..+.... ...| .++..++.+.+ +++.++|+ + . +++.|+++.|+++.
T Consensus 163 ~~~~~~~~~------~~~p-----------~~~~~~~~~~~-~~~~~~i~----~--~---~~~~dll~~ll~~~ 210 (396)
T 1n40_A 163 SLSIAFMSS------ADPI-----------PAAKINWDRDI-EYMAGILE----N--P---NITTGLMGELSRLR 210 (396)
T ss_dssp THHHHTBCC------SSCC-----------HHHHHHHHHHH-HHHHHHHH----C--T---TCCSHHHHHHHHHH
T ss_pred HHHHHhccc------cCCC-----------HHHHHHHHHHH-HHHHHHHh----C--C---CCCCCHHHHHHHhh
Confidence 443332210 0011 13445566666 77777776 1 1 33579999999764
No 71
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.27 E-value=4.4e-11 Score=95.41 Aligned_cols=164 Identities=13% Similarity=0.079 Sum_probs=106.9
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHHH
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARK 133 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 133 (254)
.+++..+.+++++ |||+++.. ..++|++++.+++++... .|+.++...........+.+++..+ |+.|+++|+
T Consensus 20 ~dp~~~~~~lr~~-~pv~~~~~---g~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQD-HPVHKLED---GTYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHHH-CSEEECTT---SCEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHH
T ss_pred cCccHHHHHHHhc-CCeEEecC---CeEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCC-chHHHHHHH
Confidence 5678888888664 89987753 378999999999999543 4443321111111111245677776 999999999
Q ss_pred HHHHHHHH-------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHHHHHHHhc
Q 037570 134 TCVLGLLN-------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELSRRILVQF 182 (254)
Q Consensus 134 ~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (254)
++.+.|+. .+..+++++++..+||.+.+.. ..+.+.+...+..
T Consensus 93 ~~~~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~-----~~~~~~~~~~~~~- 166 (394)
T 2wiy_A 93 QTNKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDDA-----DAVMEAMFEAMLM- 166 (394)
T ss_dssp HHHTTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCCH-----HHHHHHHHHHHGG-
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhHH-----HHHHHHHHHHHHh-
Confidence 99999876 6778999999999999875432 3344333222211
Q ss_pred ccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcccc
Q 037570 183 VSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKG 249 (254)
Q Consensus 183 ~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 249 (254)
....|.. ...++..++...+.+++.++|++++++ ...|+++.|+++.+
T Consensus 167 -----~~~~p~~-------~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~Ll~~~~ 214 (394)
T 2wiy_A 167 -----QSAEPAD-------GDVDRAAVAFGYLSARVAEMLEDKRVN-------PGDGLADSLLDAAR 214 (394)
T ss_dssp -----GSSSCCT-------THHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHH
T ss_pred -----ccCCccc-------hHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCCcHHHHHHHhhh
Confidence 0111211 122445566778889999999988764 13589999997643
No 72
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.27 E-value=5.4e-12 Score=101.34 Aligned_cols=165 Identities=12% Similarity=0.054 Sum_probs=106.1
Q ss_pred CCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCC-cchh------hhhccCCceeeeCCCCh
Q 037570 54 TLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPK-TTAA------NVFLYGCQDIGFSPYGE 126 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~g~ 126 (254)
.++... ++.++|||++++..++.. ++|++++.+++|+.+.. +..... .... ......+.++++.+ |+
T Consensus 33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 106 (416)
T 3p3o_A 33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-GA 106 (416)
T ss_dssp TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-HH
T ss_pred cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-ch
Confidence 567777 555679999999887666 99999999999997653 322111 0000 00001135677777 99
Q ss_pred HHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHhcccccccchhhhhHHHHHH
Q 037570 127 YWRQARKTCVLGLLN-------------------------------VILTVSNNIVSRSVLGRRAEEETAGKCNKFGELS 175 (254)
Q Consensus 127 ~w~~~R~~l~~~f~~-------------------------------~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~ 175 (254)
+|+++||++++.|+. ....+++++|+. +||.+.+.. ..+.+..
T Consensus 107 ~h~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~-----~~~~~~~ 180 (416)
T 3p3o_A 107 DHRRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKLPQGDFDFVQHFPHPLPALVMCQ-LLGFPLEDY-----DTVGRLS 180 (416)
T ss_dssp HHHHHHHTTCGGGSHHHHHHHHHHHHHHHHHHHHTCCSSSEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----HHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHH-HhCCCHHHH-----HHHHHHH
Confidence 999999999999876 223578888887 478764432 2232222
Q ss_pred HHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhccccc
Q 037570 176 RRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNFKGM 250 (254)
Q Consensus 176 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 250 (254)
..+.. .+.... .....++..++.+.+.+++.++|++++++ ...|+++.|+++.++
T Consensus 181 ~~~~~---------~~~~~~----~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~~ll~~~~~ 235 (416)
T 3p3o_A 181 IETNL---------GLALSN----DQDILVKVEQGLGRMFDYLVAAIEKRKVE-------PGDDLTSDIVRAFHD 235 (416)
T ss_dssp HTTCG---------GGTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHHHT
T ss_pred HHHHh---------hccccc----chhhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHHHhhcc
Confidence 22111 111100 02334567788889999999999998875 246899999976544
No 73
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.18 E-value=9.5e-11 Score=91.70 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=65.8
Q ss_pred HhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHHHHHHHHHHH---
Q 037570 65 KKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQARKTCVLGLLN--- 141 (254)
Q Consensus 65 ~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~f~~--- 141 (254)
++||||+++ | .++++||+.+++|+.++ ..|++++....... .+.++++.+ |+.|+++|++++++|+.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~~~l~~~~-g~~~~~~R~~~~~~fs~~~l 71 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GGISFITMD-NPEHKEFRDISAPYFLPSKI 71 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGCC-HHHHHHHHHHHHHHHSHHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---cccccccCC-chHHHHHHHHhhhhcCHHHH
Confidence 579999986 3 89999999999999865 36776652111111 256777776 99999999999999976
Q ss_pred -------------------------HH-HHHHHHHHHHHHhccccc
Q 037570 142 -------------------------VI-LTVSNNIVSRSVLGRRAE 161 (254)
Q Consensus 142 -------------------------~~-~~~~~dvi~~~~fG~~~~ 161 (254)
.+ ..+++|+|+++ ||.+.+
T Consensus 72 ~~~~~~i~~~~~~l~~~l~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 116 (343)
T 2rfb_A 72 NDYKDFIEETSNDLIKNIDNKDIISEYAVRLPVNIISKI-LGIPDS 116 (343)
T ss_dssp GGGHHHHHHHHHHHHTTCTTSCHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHHHHHHHHHhccccCHHHHHhhhhhHHHHHHH-cCCCHH
Confidence 23 68899999998 998765
No 74
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.14 E-value=8.6e-11 Score=92.84 Aligned_cols=150 Identities=18% Similarity=0.132 Sum_probs=94.7
Q ss_pred chHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCC--cchhh-----h--hcc-CCceeeeCCCCh
Q 037570 57 HGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPK--TTAAN-----V--FLY-GCQDIGFSPYGE 126 (254)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~--~~~~~-----~--~~~-~~~~~~~~~~g~ 126 (254)
+..+.++ ++||||+++ | +.++++||+.+++|+.+. ..|++++. ..... . ... .|.++++.+ |+
T Consensus 2 ~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-PP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-TT
T ss_pred CHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCC-Ch
Confidence 3456667 589999987 4 589999999999999864 46777653 10011 1 110 126677777 99
Q ss_pred HHHHHHHHHHHHHHH------------------------------HH-HHHHHHHHHHHHhcccccccchhhhhHHHHHH
Q 037570 127 YWRQARKTCVLGLLN------------------------------VI-LTVSNNIVSRSVLGRRAEEETAGKCNKFGELS 175 (254)
Q Consensus 127 ~w~~~R~~l~~~f~~------------------------------~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~ 175 (254)
.|+++|+++.++|+. .+ ..+++|+|+.+ ||.+.+.. ..+.+..
T Consensus 75 ~h~~~R~~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-----~~~~~~~ 148 (368)
T 1io7_A 75 LHDELRSMSADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKI-LGLPIEDK-----EKFKEWS 148 (368)
T ss_dssp HHHHHHGGGTTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----HHHHHHG
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-----HHHHHHH
Confidence 999999999998865 23 56889999998 99876432 2222221
Q ss_pred HHHHHhcccCCccccccccchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhcc
Q 037570 176 RRILVQFVSFSFGDMLPYLGWLDVVTGLIGRLTASSREVDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSNF 247 (254)
Q Consensus 176 ~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 247 (254)
. ..... .. .|. ..++..++.+.+.+++.++| + ...|+++.|+++
T Consensus 149 ~----~~~~~-~~--~p~---------~~~~~~~~~~~~~~~~~~~i--------~----~~~d~l~~ll~~ 192 (368)
T 1io7_A 149 D----LVAFR-LG--KPG---------EIFELGKKYLELIGYVKDHL--------N----SGTEVVSRVVNS 192 (368)
T ss_dssp G----GCTTS-CC--CTT---------CHHHHHHHHHHHHHHHHHHT--------T----SSCHHHHHHHTS
T ss_pred H----HHHhc-cC--ChH---------HHHHHHHHHHHHHHHHHHHh--------C----CCCCHHHHHHhc
Confidence 1 11110 00 121 12345566667777777766 1 135899998864
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=98.57 E-value=1.3e-06 Score=69.92 Aligned_cols=96 Identities=14% Similarity=0.009 Sum_probs=63.4
Q ss_pred CCCccccc---cccccCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcch---hhh
Q 037570 38 PRFPITGN---LHQLLGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTA---ANV 111 (254)
Q Consensus 38 ~~~p~~G~---~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~---~~~ 111 (254)
.++|.+|- -..+ . .+++..+.++++ +|||++ ..+....+|++++.+++|+.+.. .|++...... ...
T Consensus 18 ~~~P~~~~dp~~~~~-~--~dP~~~~~~lR~-~gPV~~--~~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~ 90 (412)
T 4dnj_A 18 AGVPHLGIDPFALDY-F--ADPYPEQETLRE-AGPVVY--LDKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKE 90 (412)
T ss_dssp TTSCEECCCTTSHHH-H--HSCHHHHHHHHH-HCSSEE--ETTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTS
T ss_pred CCCCccCCCCCCHHH-H--hCcHHHHHHHHh-cCCEEE--ECCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccc
Confidence 35677661 2233 3 678888888765 699975 45668899999999999996443 4433322111 111
Q ss_pred hc-cCCceeeeCCCChHHHHHHHHHHHHHHH
Q 037570 112 FL-YGCQDIGFSPYGEYWRQARKTCVLGLLN 141 (254)
Q Consensus 112 ~~-~~~~~~~~~~~g~~w~~~R~~l~~~f~~ 141 (254)
.. ..+..++..+ |++|+++|++++++|+.
T Consensus 91 ~~~~~~~~~~~~D-g~~H~r~R~~~~~~Fs~ 120 (412)
T 4dnj_A 91 KPWRPPSLILEAD-PPAHTRTRAVLSKVLSP 120 (412)
T ss_dssp CCSSCCCTTTTCC-TTHHHHHHHHHHHHTCH
T ss_pred ccccCCCccccCC-hHHHHHHHhhcccccCH
Confidence 11 1133455566 99999999999999987
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=98.52 E-value=1.4e-06 Score=69.80 Aligned_cols=85 Identities=11% Similarity=-0.062 Sum_probs=51.1
Q ss_pred CCCchHHHHHHHhhC-CeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcchhhhhccCCceeeeCCCChHHHHHH
Q 037570 54 TLPHGSLQALSKKYG-PLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTTAANVFLYGCQDIGFSPYGEYWRQAR 132 (254)
Q Consensus 54 ~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 132 (254)
.+++..+.++++..+ +++.. ..+...-+|+..+.+++|+... ..|+++...............++..+ +++|+++|
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~-~~~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D-~p~H~r~R 113 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWT-PFTGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMD-PPEHTPYR 113 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEE-SSTTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCC-TTTHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEec-CCCCCEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCC-cHHHHHHH
Confidence 445666667766543 34333 2233566789999999999643 35655432211111111122233445 99999999
Q ss_pred HHHHHHHHH
Q 037570 133 KTCVLGLLN 141 (254)
Q Consensus 133 ~~l~~~f~~ 141 (254)
|+++++|+.
T Consensus 114 rll~~~Fs~ 122 (417)
T 4dxy_A 114 KALDKGLNL 122 (417)
T ss_dssp HHHHHHHCH
T ss_pred HHhhhhcCH
Confidence 999999987
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=95.34 E-value=0.0035 Score=49.48 Aligned_cols=117 Identities=13% Similarity=0.077 Sum_probs=66.5
Q ss_pred CCCC-CCCCccccccccc----cCCCCCCchHHHHHHHhhCCeEEEEeCCcCeEEeccHHHHHHHHHHcCcccCCCCCcc
Q 037570 33 LPPS-PPRFPITGNLHQL----LGTATLPHGSLQALSKKYGPLMYMHLGYSPTLVVSSAEIAREIIKNHDIVFSNRPKTT 107 (254)
Q Consensus 33 ~~pg-p~~~p~~G~~~~~----~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dp~~ik~il~~~~~~~~~~~~~~ 107 (254)
.||| ++++|++|+...+ .. .++...+.+++++ ||++.. .+.+++++++.+++|+.+ ..|++++...
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~--~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~ 105 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHD--DDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRT 105 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCC--SCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCC
T ss_pred CCCcccccccccCCchhhcCchhc--cCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccc
Confidence 3556 4467999976442 13 6788899998876 898753 568999999999999975 3565543211
Q ss_pred -hhh-----hhccCCceeeeCCCChHHHHHHHH-----HH-----------HHHHH---HHHHHHHHHHHHHHhcccccc
Q 037570 108 -AAN-----VFLYGCQDIGFSPYGEYWRQARKT-----CV-----------LGLLN---VILTVSNNIVSRSVLGRRAEE 162 (254)
Q Consensus 108 -~~~-----~~~~~~~~~~~~~~g~~w~~~R~~-----l~-----------~~f~~---~~~~~~~dvi~~~~fG~~~~~ 162 (254)
... .....+.++++.+ |++| .+.+ +. ..+-- ....+++++|+++ ||.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~d-g~~H--~~~Ft~~~~i~~~~~~ll~~~~g~~Dl~~~~a~~l~~~vi~~l-~G~~~~~ 181 (381)
T 2yjn_B 106 PEWMRAAGAPPAEWAQPFRDVH-AASW--EGEVPDVGELAESFAGLLPGAGARLDLVGDFAWQVPVQGMTAV-LGAAGVL 181 (381)
T ss_dssp CHHHHHHTCCHHHHTHHHHHHH-HCCC--CSCCCCCSCHHHHTSTTSCC------CCCCCCTHHHHHHHHTC------CC
T ss_pred cccccccccccchhhhhhhhCC-chhh--hhccCChHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 000 0000134566665 6666 1100 00 00000 3369999999995 9998753
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=81.43 E-value=5.8 Score=24.35 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=37.5
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHHcC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~~~ 97 (254)
-++|+++. .-....+.++..+||+|..+.+. |.-+|...+++.++.++..+.
T Consensus 14 lfV~~Lp~-----~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~ 73 (103)
T 1s79_A 14 VYIKGFPT-----DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG 73 (103)
T ss_dssp EEEECCCT-----TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSC
T ss_pred EEEECCCC-----CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCC
Confidence 34565552 33456788899999999887764 456788899999999996433
No 79
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.49 E-value=12 Score=22.77 Aligned_cols=63 Identities=17% Similarity=0.102 Sum_probs=43.2
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhC-CeEEEEeCCcCeEEeccHHHHHHHHHH-cCcccCCCCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYG-PLMYMHLGYSPTLVVSSAEIAREIIKN-HDIVFSNRPK 105 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dp~~ik~il~~-~~~~~~~~~~ 105 (254)
-.++|++.-.. .......+.++..+|| +|..+ .+|.-+|...+.+.++..+.. +...+..|+.
T Consensus 12 lYV~NL~~~~~-~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i 76 (96)
T 2diu_A 12 LYVYNLPANKD-GKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRI 76 (96)
T ss_dssp EEEESCCTTSC-HHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCC
T ss_pred EEEeCCCCcCC-HHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceE
Confidence 34788775411 0112335778999995 98888 579999999999999888853 4445555543
No 80
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=74.19 E-value=8.5 Score=22.73 Aligned_cols=52 Identities=12% Similarity=0.195 Sum_probs=36.6
Q ss_pred CCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHH
Q 037570 36 SPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREI 92 (254)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~i 92 (254)
.|...-++|+++. .--.+.+.+...+||+|..+.+. |.-+|-..+++.++.+
T Consensus 9 ~~~~~l~V~~Lp~-----~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 9 HHGSKVFVGRCTE-----DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp --CCEEEEESCCT-----TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCCCC-----CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 3333455676653 33456788999999999988875 5677888999998853
No 81
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=73.21 E-value=7.4 Score=21.80 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=31.8
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
..+.+.++..+||+|..+.+. |.-.|...+++.++..+..+.
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 456688889999998887663 345677889999999986543
No 82
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=72.97 E-value=14 Score=22.84 Aligned_cols=57 Identities=21% Similarity=0.343 Sum_probs=40.6
Q ss_pred CCCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC------CcCeEEeccHHHHHHHHHH
Q 037570 34 PPSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------~~~~vvv~dp~~ik~il~~ 95 (254)
+|.|...-++||++. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 4 ~~~~~~~l~V~nlp~-----~~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 4 PPEVNRILYIRNLPY-----KITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CTTCCSEEEEESCCT-----TCCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 444544556777653 33456688999999999888762 3567888899999888863
No 83
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=72.77 E-value=11 Score=21.55 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=31.2
Q ss_pred chHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH
Q 037570 57 HGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~ 95 (254)
.+.+.+...+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 36788889999999888765 4467788899999998864
No 84
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=70.76 E-value=10 Score=21.24 Aligned_cols=42 Identities=12% Similarity=0.080 Sum_probs=31.1
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
..+.+.++..+||+|..+.+. |.-.|-..+++.++.++..+.
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 62 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF 62 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence 456688899999998877653 235677789999999885433
No 85
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=65.43 E-value=4.9 Score=24.61 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=32.3
Q ss_pred CchHHHHHHHhhCCeEEEEeCC-cCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLGY-SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~~-~~~vvv~dp~~ik~il~~ 95 (254)
-...+.++...||.+.--|+-. .-.+++.+|+.+++++..
T Consensus 18 Kt~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 18 KTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp CHHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hhHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 3456788888999777777765 488899999999999974
No 86
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=63.21 E-value=11 Score=22.99 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=33.0
Q ss_pred CCchHHHHHHHhhCCeEEEEeCC-cCeEEeccHHHHHHHHHH
Q 037570 55 LPHGSLQALSKKYGPLMYMHLGY-SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 55 ~~~~~~~~~~~~yG~i~~~~~~~-~~~vvv~dp~~ik~il~~ 95 (254)
--...+.++...||.+.--|+-. .-.+++.+|+.+++++..
T Consensus 27 wKt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 27 WKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp CCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hhhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 34467889999999877777755 478899999999999973
No 87
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=62.60 E-value=22 Score=21.24 Aligned_cols=51 Identities=20% Similarity=0.189 Sum_probs=36.6
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
|-++||+.. .--...+.++..+||+|..+++. |.-+|-..+++.++.....
T Consensus 9 wL~VgNL~~-----~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~~ 62 (89)
T 2wbr_A 9 WLLLKNLTA-----QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMA 62 (89)
T ss_dssp EEEEECCCT-----TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred eEEEeCCCc-----cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHHH
Confidence 455677653 33457889999999999888753 4577778888777766643
No 88
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=62.25 E-value=25 Score=21.78 Aligned_cols=57 Identities=11% Similarity=0.125 Sum_probs=40.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--CcCeEEeccHHHHHHHHHH-cCcccCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--YSPTLVVSSAEIAREIIKN-HDIVFSN 102 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~vvv~dp~~ik~il~~-~~~~~~~ 102 (254)
-++||++. ..-.+.+.++.++||+|..+.+. +.-+|...+++.++..+.. +...+..
T Consensus 19 l~V~nLp~-----~~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 19 VVVSGLPP-----SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp EEEEECCS-----SCCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 45676663 33456688899999999888764 5677888899999988864 4434433
No 89
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=60.68 E-value=27 Score=21.55 Aligned_cols=56 Identities=14% Similarity=0.239 Sum_probs=40.1
Q ss_pred CCCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 35 PSPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
|.|..--++||++. .--...+.++..+||.|..+.+. |.-+|-..+++.++..+..
T Consensus 13 ~~~~~~LfV~nLp~-----~vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~~ 71 (105)
T 1sjq_A 13 GVPSRVIHIRKLPI-----DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNY 71 (105)
T ss_dssp CCCCCEEEECSCCT-----TSCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 33434455677653 23456688999999999888764 4578888899998888863
No 90
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=59.37 E-value=26 Score=21.71 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=36.3
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~ 95 (254)
-++||++. .--.+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 8 lfV~nLp~-----~~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDK-----SIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCT-----TCCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCC-----CCCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 34566652 23456788999999998877653 2357888999999998864
No 91
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=57.22 E-value=29 Score=20.84 Aligned_cols=49 Identities=20% Similarity=0.160 Sum_probs=34.8
Q ss_pred cccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 42 ITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
++||++. .--.+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 23 fV~nLp~-----~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQ-----NMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCT-----TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC-----CCCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 4566653 234567889999999988776531 246788899999888854
No 92
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=57.15 E-value=31 Score=21.24 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=36.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|++.. .--.+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 9 lfV~nL~~-----~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 9 VTFARLND-----NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEESCCT-----TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCC-----CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 45566652 33566788999999999887763 2247888999999998864
No 93
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=56.42 E-value=28 Score=20.38 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=36.0
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++|+++. .-..+.+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~v~nlp~-----~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 17 CLGVFGLSL-----YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CEEEESCCS-----SCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC-----CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 345566652 23456788999999998877663 2356778899999998864
No 94
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=56.13 E-value=32 Score=20.94 Aligned_cols=50 Identities=10% Similarity=0.089 Sum_probs=38.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~vvv~dp~~ik~il~~ 95 (254)
-++||++. ..-.+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 l~V~nLp~-----~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPP-----SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCS-----SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 45566652 33567788999999998887764 6778888999999998874
No 95
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=55.91 E-value=31 Score=20.84 Aligned_cols=53 Identities=19% Similarity=0.180 Sum_probs=38.5
Q ss_pred CccccccccccCCCCC----CchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATL----PHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++||++.- . .. ....+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 17 ~l~V~nLp~~-~--~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQV-G--PDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCC-C--TTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcc-h--hhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3566777643 2 21 346788999999999888875 4567888899988888865
No 96
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=54.83 E-value=34 Score=20.99 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=36.3
Q ss_pred CCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH-cCcccCCCC
Q 037570 55 LPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN-HDIVFSNRP 104 (254)
Q Consensus 55 ~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~-~~~~~~~~~ 104 (254)
.....+.++..+||+|..+.+. +.-+|...+++.++..+.. +...+..++
T Consensus 22 ~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 22 TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 3456788999999999888763 4567888899999888864 444444443
No 97
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=54.52 E-value=32 Score=20.97 Aligned_cols=56 Identities=11% Similarity=0.055 Sum_probs=39.1
Q ss_pred CCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 36 SPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
.|...-++||++.- .--...+.++..+||.|..+++. +.-+|-..+++.+...+..
T Consensus 13 ~p~~~l~V~nLp~~----~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 13 ETRRVVHIMDFQRG----KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCCEEEEESCCCS----SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC----cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 34444556777641 12345678888999999888875 3468888899998888763
No 98
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=54.21 E-value=30 Score=20.75 Aligned_cols=50 Identities=16% Similarity=0.110 Sum_probs=36.1
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 l~v~nLp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 18 LFVGMLNK-----QQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEESCCT-----TCCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 44566652 23456788999999998877653 3457788899999998864
No 99
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=52.29 E-value=52 Score=22.26 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=35.4
Q ss_pred ccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-----CcCeEEeccHHHHHHHHHH
Q 037570 43 TGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-----YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 43 ~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~vvv~dp~~ik~il~~ 95 (254)
+||+.. .--.+.+.+...+||.|-.+++. +.-+|-..|++.++.....
T Consensus 51 VgNL~~-----~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 51 VENLFY-----PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp ECSCCS-----CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EeCcCC-----CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 566642 33456789999999998887763 2467888899988888864
No 100
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=52.14 E-value=30 Score=19.73 Aligned_cols=49 Identities=14% Similarity=0.106 Sum_probs=34.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~ 94 (254)
-++|+++. .-..+.+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 8 l~v~nlp~-----~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 8 LYIRGLQP-----GTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEESCCT-----TCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 44566552 23445677888899998887653 235677889999888886
No 101
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=51.05 E-value=42 Score=20.82 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=37.5
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhC-CeEEEEeC-----CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYG-PLMYMHLG-----YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~-----~~~~vvv~dp~~ik~il~~ 95 (254)
-++||++. .--.+.+.++.++|| .|..+.+. |.-+|-..+++.++..+..
T Consensus 31 l~VgnLp~-----~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 31 ITMKNLPE-----GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEECSSC-----CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCC-----CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 45566652 335677899999999 78777763 5678888999999988864
No 102
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=51.04 E-value=44 Score=21.10 Aligned_cols=50 Identities=12% Similarity=0.209 Sum_probs=36.9
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~ 94 (254)
.-++||++. .--...+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 33 ~LfVgNLp~-----~vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPI-----DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCT-----TCCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 345676653 23456788999999998877764 557788889998888875
No 103
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=50.37 E-value=40 Score=20.43 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=31.7
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 39 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 39 QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456688999999999888764 3457788899999988863
No 104
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=49.68 E-value=40 Score=20.23 Aligned_cols=40 Identities=13% Similarity=0.198 Sum_probs=31.1
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 36 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 36 TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 456688999999998887763 3356778899999998864
No 105
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=49.50 E-value=28 Score=19.96 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=36.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHc
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNH 96 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~ 96 (254)
-++|+++. .-....+.++..+||+|..+.+. |.-+|...+++.++..+...
T Consensus 14 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 14 MFVGGLSW-----DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEECCCT-----TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 45566652 33456788999999998877653 23567788999999988543
No 106
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=49.07 E-value=40 Score=20.03 Aligned_cols=48 Identities=17% Similarity=0.240 Sum_probs=34.3
Q ss_pred CchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHHHHH-cCcccCCC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREIIKN-HDIVFSNR 103 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~il~~-~~~~~~~~ 103 (254)
..+.+.++..+||+|..+.+. +.-+|-..+++.++..+.. +...+..+
T Consensus 13 t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 65 (101)
T 2hvz_A 13 GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGS 65 (101)
T ss_dssp SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSC
T ss_pred CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCc
Confidence 456688999999998777653 4567888899999998863 33334333
No 107
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=48.33 E-value=53 Score=21.84 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=31.3
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 85 t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 85 QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 456788999999998877653 3467788899999988864
No 108
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.22 E-value=44 Score=20.26 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=32.4
Q ss_pred CchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~il~~ 95 (254)
-...+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 356788999999999888874 3467888899999988865
No 109
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=48.04 E-value=41 Score=19.86 Aligned_cols=50 Identities=24% Similarity=0.209 Sum_probs=36.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 11 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 11 LFVRNLSY-----TSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEECCCT-----TCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 34555542 23456788999999999888763 3357888899999999854
No 110
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=47.44 E-value=44 Score=20.69 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=38.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH-cCcccCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN-HDIVFSN 102 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~-~~~~~~~ 102 (254)
-++|++.. .-..+.+.++.++||+|..+.+. |.-+|-..+++.++..+.. +...+..
T Consensus 10 l~V~nLp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g 75 (116)
T 2fy1_A 10 LFIGGLNR-----ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHG 75 (116)
T ss_dssp EEEECCTT-----TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 34565542 33456788999999998777653 3457888899999999864 3333433
No 111
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.39 E-value=34 Score=20.98 Aligned_cols=42 Identities=7% Similarity=-0.062 Sum_probs=31.1
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
-...+.++..+||.|..+.+. |.-+|...+++.++..+..+.
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 38 RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 456688899999999888774 245677788888888884343
No 112
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=45.45 E-value=44 Score=19.48 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=35.5
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 19 l~v~nlp~-----~~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (95)
T 2ywk_A 19 VFVGNLEA-----RVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 76 (95)
T ss_dssp EEEECCCT-----TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHH
T ss_pred EEEECCCC-----CCCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHH
Confidence 34555542 23456788999999998887763 2457788899999998863
No 113
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.45 E-value=44 Score=19.48 Aligned_cols=58 Identities=19% Similarity=0.305 Sum_probs=39.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH-cCcccCCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN-HDIVFSNR 103 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~-~~~~~~~~ 103 (254)
-++|+++. .-..+.+.++..+||+|..+.+.. .-+|...+++.++..+.. +...+..+
T Consensus 8 l~v~nlp~-----~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 75 (95)
T 2dnz_A 8 LYVGSLHF-----NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGR 75 (95)
T ss_dssp EEEESCCT-----TCCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCc
Confidence 34566542 334566889999999988877632 356778899999999873 44344333
No 114
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=45.34 E-value=57 Score=22.77 Aligned_cols=51 Identities=10% Similarity=0.059 Sum_probs=37.5
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~il~~ 95 (254)
-++||+... .--...+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 7 l~V~nL~~~----~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~~ 61 (205)
T 3tyt_A 7 LMVYGLDQS----KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITH 61 (205)
T ss_dssp EEEECCCTT----TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCcc----cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 455666522 22345788999999999988864 5678888999999888853
No 115
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=45.22 E-value=49 Score=20.00 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=36.9
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~ 94 (254)
.-++||++. .--...+.++.++||.|..+.+. |.-+|-..+++.++..+.
T Consensus 17 ~l~V~nLp~-----~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPG-----EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCT-----TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 355677662 33456688889999999888764 457888889998888875
No 116
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.66 E-value=51 Score=19.96 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=35.9
Q ss_pred cccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 42 ITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
++|+++. .--...+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 29 ~V~nl~~-----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 29 YCGGIAS-----GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEECCSS-----CCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4455542 23456788899999999888764 5577888899999888854
No 117
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=43.78 E-value=38 Score=18.73 Aligned_cols=42 Identities=5% Similarity=0.009 Sum_probs=29.4
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
..+.+.+...+||++..+.+. |.-.|-..+++.++..+....
T Consensus 13 t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 63 (77)
T 1uaw_A 13 TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 63 (77)
T ss_dssp CSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTT
T ss_pred CHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCC
Confidence 456688889999987666542 234566678888888886543
No 118
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=43.77 E-value=54 Score=20.07 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=37.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHHcCc
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKNHDI 98 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~~~~ 98 (254)
-++|+++. .--.+.+.++..+||+|..+.+.. .-+|-..+++.++..+.....
T Consensus 20 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~ 81 (116)
T 2cqd_A 20 IFVGGLPY-----HTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP 81 (116)
T ss_dssp EEEECCCS-----SCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCCC
Confidence 34566552 234567889999999998887643 357778899999999865433
No 119
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=43.35 E-value=61 Score=20.62 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=31.1
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 55 ~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 55 DEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp CHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456788999999998777653 2357788899999999874
No 120
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=43.06 E-value=47 Score=19.18 Aligned_cols=50 Identities=16% Similarity=0.184 Sum_probs=35.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 11 l~V~nlp~-----~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 11 IFVRNLPF-----DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEECSCCT-----TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 34566652 33456788999999998777653 3456778899999988864
No 121
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.69 E-value=52 Score=19.56 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=30.6
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 21 ~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 21 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp CHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 456688899999988776653 3457778899999999864
No 122
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=42.62 E-value=64 Score=20.53 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=29.3
Q ss_pred HHHHHHHhhCCeEEEEeC------CcCeEEeccHHHHHHHHHH
Q 037570 59 SLQALSKKYGPLMYMHLG------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 59 ~~~~~~~~yG~i~~~~~~------~~~~vvv~dp~~ik~il~~ 95 (254)
.+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 49 ~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 49 LLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp HHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred HHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 356788999999888763 4578888999999888864
No 123
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=42.48 E-value=63 Score=20.47 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=36.3
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++|+++. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 48 ~l~V~nLp~-----~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 48 CLGVFGLSL-----YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CBCEETCTT-----SCCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 344566552 23456688999999999888763 2356778899999999874
No 124
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.26 E-value=52 Score=19.43 Aligned_cols=51 Identities=12% Similarity=0.066 Sum_probs=36.3
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++|+++. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 19 ~l~v~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPF-----SCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCT-----TCCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 345566552 23456688899999998877763 3457888899999998854
No 125
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.80 E-value=54 Score=19.49 Aligned_cols=49 Identities=14% Similarity=0.052 Sum_probs=35.8
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~ 94 (254)
-++|+++. .--...+.++..+||+|..+.+. +.-+|...+++.++..+.
T Consensus 18 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 18 LYVGNLSR-----DVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEESCCT-----TCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCc-----cCCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 45566652 33456788999999998877653 345778889999998886
No 126
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=41.72 E-value=58 Score=19.81 Aligned_cols=51 Identities=8% Similarity=0.041 Sum_probs=36.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHc
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNH 96 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~ 96 (254)
-++|++.. .--...+.++..+||+|..+.+. |.-+|...+++.++..+...
T Consensus 28 lfV~nLp~-----~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 28 MFIGGLSW-----QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp EEEESCCT-----TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 34565542 33456688899999999888763 23578889999999998654
No 127
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=41.67 E-value=45 Score=19.08 Aligned_cols=42 Identities=14% Similarity=0.063 Sum_probs=30.4
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
....+.++..+||+|..+.+. |.-.|-..+++.++..+..+.
T Consensus 19 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g 69 (89)
T 3ucg_A 19 TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDE 69 (89)
T ss_dssp CHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTT
T ss_pred CHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCC
Confidence 456688899999998777653 135677889998888884333
No 128
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=41.35 E-value=63 Score=20.12 Aligned_cols=48 Identities=10% Similarity=0.158 Sum_probs=35.4
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH-cCcccCCC
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN-HDIVFSNR 103 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~-~~~~~~~~ 103 (254)
....+.++..+||+|..+.+. |.-+|...+++.++.++.. +...+..+
T Consensus 35 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 92 (126)
T 3ex7_B 35 TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 92 (126)
T ss_dssp CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCe
Confidence 456788999999999888763 3467888899999999864 44444433
No 129
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=41.27 E-value=59 Score=19.79 Aligned_cols=67 Identities=13% Similarity=0.059 Sum_probs=39.3
Q ss_pred CCCCCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----------CcCeEEeccHHHHHHHHHH-cCcccCC
Q 037570 36 SPPRFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----------YSPTLVVSSAEIAREIIKN-HDIVFSN 102 (254)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~vvv~dp~~ik~il~~-~~~~~~~ 102 (254)
.|...-++.|+..-..........+.+...+||+|..+.+. |.-.|-..+++.+...... +...|..
T Consensus 6 ~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~G 83 (105)
T 2pe8_A 6 CPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGG 83 (105)
T ss_dssp SCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 34445556666532000034556778888999998887653 2235677788888777754 4444433
No 130
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=41.25 E-value=31 Score=21.15 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=37.4
Q ss_pred CccccccccccCCCCCCchHHH---HHHHhhCCeEEEEeC------------CcCeEEeccHHHHHHHHHH-cCccc
Q 037570 40 FPITGNLHQLLGTATLPHGSLQ---ALSKKYGPLMYMHLG------------YSPTLVVSSAEIAREIIKN-HDIVF 100 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~---~~~~~yG~i~~~~~~------------~~~~vvv~dp~~ik~il~~-~~~~~ 100 (254)
.-++|+++.- -..+.+. ++..+||+|..+.+. |.-+|...+++.++..+.. +...+
T Consensus 17 ~l~V~nLp~~-----~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~ 88 (111)
T 2cpi_A 17 LVFVVGLSQR-----LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVV 88 (111)
T ss_dssp CEEEEEECTT-----TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEE
T ss_pred EEEEECCCCC-----CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEE
Confidence 3456766533 2344566 788899998887754 2456778899999998875 44334
No 131
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.69 E-value=35 Score=19.65 Aligned_cols=46 Identities=15% Similarity=0.317 Sum_probs=33.5
Q ss_pred cccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHH
Q 037570 42 ITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREI 92 (254)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~i 92 (254)
++|+++. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++.+
T Consensus 9 ~V~nLp~-----~~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 9 FVGRCTG-----DMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEESCCS-----SSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEeCCCC-----CCCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 4566542 23456688888999999888774 4578888999998764
No 132
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.42 E-value=53 Score=19.03 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=36.8
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++|+++. .-..+.+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 ~l~V~nlp~-----~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 18 TVYVSNLPF-----SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp SEEEESCCT-----TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCC-----CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 345666652 33456688899999999888763 2357888899999998854
No 133
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=40.11 E-value=57 Score=19.24 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=34.6
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEE--------EEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMY--------MHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~--------~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++|++.. .--.+.+.++..+||.|.. +.+. |.-+|...+++.++..+..
T Consensus 15 ~l~V~nLp~-----~~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~ 82 (99)
T 2la6_A 15 TIFVQGLGE-----NVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 82 (99)
T ss_dssp EEEEECCCS-----SCCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 345566652 3345678889999998765 4432 2356778899999888863
No 134
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=39.97 E-value=50 Score=18.55 Aligned_cols=40 Identities=13% Similarity=0.105 Sum_probs=30.5
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
....+.+...+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 14 t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 14 DDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp CHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 446678888999998877653 2357888899999998864
No 135
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.91 E-value=59 Score=19.34 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=36.2
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .--...+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 l~V~nlp~-----~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 18 LHVSNIPF-----RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEESCCT-----TCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 45566652 23456688899999999887763 3467788899999998864
No 136
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=39.61 E-value=40 Score=23.32 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=32.4
Q ss_pred CCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHHc
Q 037570 55 LPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKNH 96 (254)
Q Consensus 55 ~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~~ 96 (254)
.....+.++..+||+|..+.+. |.-+|-..+++.++..+...
T Consensus 121 ~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 121 ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 3457788999999998777653 45678888999999998643
No 137
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=39.37 E-value=64 Score=19.61 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=31.8
Q ss_pred CchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++..+||+|..+.+ -|.-+|...+++.++..+..
T Consensus 44 t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 44 QESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp CHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 45668889999999877765 46678888899999988864
No 138
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.20 E-value=60 Score=19.22 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=36.5
Q ss_pred CCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 39 RFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.--++|+++.- -..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 13 ~~l~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 13 RVLYVGGLAEE-----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp SCEEEESCCSS-----CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 34456766532 3456788999999998877762 2346777899999998854
No 139
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=39.13 E-value=53 Score=18.64 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=34.7
Q ss_pred cccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 42 ITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
++|+++. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 10 ~v~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 10 FVGDLSP-----EITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEESCCT-----TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC-----CCCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4555542 33456688899999998777653 2356778899999998864
No 140
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=38.74 E-value=1e+02 Score=21.74 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=40.4
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHHHH-HcCcccCCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREIIK-NHDIVFSNR 103 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~il~-~~~~~~~~~ 103 (254)
-++|+++.- .--.+.+.++.++||+|..+.+. |.-+|-..+++.++..+. -+...+..+
T Consensus 37 l~V~nLp~~----~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 100 (229)
T 2adc_A 37 LLVSNLNPE----RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGK 100 (229)
T ss_dssp EEEESCCTT----TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSS
T ss_pred EEEeCCCcc----cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeECCe
Confidence 345666531 12346788899999999888774 557888999999999986 344344333
No 141
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=38.48 E-value=66 Score=19.54 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=31.0
Q ss_pred hHHHHHHHhhCCeEEEEeC-----------CcCeEEeccHHHHHHHHHH-cCcccCC
Q 037570 58 GSLQALSKKYGPLMYMHLG-----------YSPTLVVSSAEIAREIIKN-HDIVFSN 102 (254)
Q Consensus 58 ~~~~~~~~~yG~i~~~~~~-----------~~~~vvv~dp~~ik~il~~-~~~~~~~ 102 (254)
+.+.+...+||+|..+.+. |.-.|-..+++.++..+.. +...|..
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~G 86 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFAN 86 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 4567778899999988874 2335777899888877754 4444433
No 142
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=38.46 E-value=72 Score=19.95 Aligned_cols=45 Identities=9% Similarity=0.157 Sum_probs=33.1
Q ss_pred CchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH-cCccc
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN-HDIVF 100 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~-~~~~~ 100 (254)
-.+.+.++..+||+|..+.+. |.-+|...+++.++..+.. +...+
T Consensus 50 te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~ 98 (121)
T 2bz2_A 50 TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQV 98 (121)
T ss_dssp CHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBC
T ss_pred CHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEE
Confidence 456788899999998777664 4567788899998888854 43333
No 143
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=38.41 E-value=68 Score=20.82 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=31.4
Q ss_pred CchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++.++||+|..+.+. |.-.|...+++.++..+..
T Consensus 13 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~~ 60 (166)
T 3md3_A 13 TEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQT 60 (166)
T ss_dssp CHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHHH
Confidence 456788999999999887763 3467888899999999843
No 144
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=38.32 E-value=54 Score=18.50 Aligned_cols=51 Identities=20% Similarity=0.168 Sum_probs=36.2
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++|+++. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 9 ~l~V~nl~~-----~~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 9 VLYVGGLAE-----EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp EEEEECCCT-----TCCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC-----CCCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 345566652 23456788899999999888762 2357888899999988853
No 145
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.04 E-value=66 Score=19.38 Aligned_cols=52 Identities=15% Similarity=0.168 Sum_probs=37.4
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHc
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNH 96 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~ 96 (254)
.-++|+++. .--...+.++..+||+|..+.+. |.-+|-..+++.++..+..-
T Consensus 17 ~l~V~nLp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~ 77 (111)
T 1x4h_A 17 TVFIRNLSF-----DSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAA 77 (111)
T ss_dssp CEEEESCCT-----TCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHH
T ss_pred EEEEECCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHHh
Confidence 445666653 23456788899999999888764 23567788999999998653
No 146
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.00 E-value=62 Score=20.14 Aligned_cols=51 Identities=16% Similarity=0.168 Sum_probs=36.8
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~ 94 (254)
.-++||++.- +--...+.++.++||+|..+++. |.-+|-..+++.+...+.
T Consensus 27 ~l~V~NLp~~----~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 27 VIHLSNLPHS----GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp EEEEESCCCS----SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred EEEEeCCCCc----cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 4556666531 13456688899999998888875 446788889998888876
No 147
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.92 E-value=62 Score=19.04 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=39.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcCcccCCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHDIVFSNR 103 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~~~~~~~ 103 (254)
-++|+++. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..+...+..+
T Consensus 13 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 79 (99)
T 2dgs_A 13 IFVGGIPH-----NCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 79 (99)
T ss_dssp EEEESCCS-----SCCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSC
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCe
Confidence 44566552 33456688899999999888763 235678889999999987544444433
No 148
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.84 E-value=63 Score=19.72 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=29.1
Q ss_pred hHHHHHHHhhCCeEEEEeC-----CcCeEEeccHHHHHHHHHH
Q 037570 58 GSLQALSKKYGPLMYMHLG-----YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 58 ~~~~~~~~~yG~i~~~~~~-----~~~~vvv~dp~~ik~il~~ 95 (254)
+.+.+...+||+|..+.+. |.-+|...+++.+...+..
T Consensus 41 ~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~ 83 (112)
T 2dit_A 41 EDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQT 83 (112)
T ss_dssp HHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHH
Confidence 4677888899998777653 4567778899988888854
No 149
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.67 E-value=64 Score=19.15 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=38.8
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH-cCcccC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN-HDIVFS 101 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~-~~~~~~ 101 (254)
-++|+++. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+.. +...+.
T Consensus 16 l~V~nLp~-----~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 81 (103)
T 2dnm_A 16 LKVDNLTY-----RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELD 81 (103)
T ss_dssp EEEESCCT-----TCCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBT
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 44566652 33456788999999999888764 3457888899999888864 443343
No 150
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=37.48 E-value=62 Score=18.89 Aligned_cols=50 Identities=12% Similarity=0.287 Sum_probs=35.7
Q ss_pred ccccccccccCCCCCCchHHH----HHHHhhCCeEEEEeC------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQ----ALSKKYGPLMYMHLG------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~----~~~~~yG~i~~~~~~------~~~~vvv~dp~~ik~il~~ 95 (254)
-++||++.- -..+.+. ++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 11 l~V~nLp~~-----~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 11 IYINNLNEK-----IKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEESCCTT-----SCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 456666532 2233344 899999999888764 5678888999999998864
No 151
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.42 E-value=65 Score=19.14 Aligned_cols=55 Identities=13% Similarity=0.072 Sum_probs=38.2
Q ss_pred CCCCCccccccccccCCCCCCchHHHHHHHh-hCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 36 SPPRFPITGNLHQLLGTATLPHGSLQALSKK-YGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~-yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
.|..--++|+++. .--.+.+.++..+ ||+|..+.+. |.-+|-..+++.++..+..
T Consensus 7 ~~~~~l~V~nLp~-----~~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 7 GPEYSLFVGDLTP-----DVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SCCCCEEEECCCT-----TCCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCC-----CCCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 3333455676653 2345668888888 9998877652 3467788899999999874
No 152
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.08 E-value=41 Score=20.49 Aligned_cols=40 Identities=8% Similarity=0.080 Sum_probs=30.6
Q ss_pred CchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 42 te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 42 RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp CHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 456688899999998777663 3467778889988888864
No 153
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=36.74 E-value=67 Score=19.09 Aligned_cols=38 Identities=26% Similarity=0.234 Sum_probs=30.1
Q ss_pred hHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 58 GSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 58 ~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+...+||+|..+.+. |.-+|...+++.++..+..
T Consensus 27 ~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 73 (100)
T 3ns6_A 27 KALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKS 73 (100)
T ss_dssp HHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4577888999999888764 3467888899999988854
No 154
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=36.23 E-value=1e+02 Score=21.13 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=32.1
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++.++||+|..+.+. |.-+|-..+++.++..+..
T Consensus 41 t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 41 GEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp CHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 456788999999999888763 3467888899999999974
No 155
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=36.15 E-value=88 Score=20.42 Aligned_cols=50 Identities=18% Similarity=0.090 Sum_probs=36.4
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .--.+.+.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 42 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 100 (156)
T 1h2v_Z 42 LYVGNLSF-----YTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 (156)
T ss_dssp EEEESCCT-----TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 44566552 33456788999999999888762 2347888899999999874
No 156
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.10 E-value=43 Score=20.54 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=30.8
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-...+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 40 te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 40 TEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp CHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 456688899999998777653 2456778899999999865
No 157
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=35.53 E-value=67 Score=21.70 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=37.2
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
-++|+++. .--...+.++..+||+|..+.+. |.-+|...+++.++..+....
T Consensus 16 l~V~nLp~-----~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~ 76 (196)
T 1l3k_A 16 LFIGGLSF-----ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP 76 (196)
T ss_dssp EEEESCCT-----TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCC
Confidence 45566652 23456788999999998776652 246788899999999996643
No 158
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.11 E-value=69 Score=18.75 Aligned_cols=50 Identities=16% Similarity=0.147 Sum_probs=36.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC------------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG------------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 l~V~nLp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 8 LFIKNLNF-----STTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEEESCCT-----TCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 34566652 33456788999999998777653 2457788899999999875
No 159
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.86 E-value=74 Score=19.07 Aligned_cols=50 Identities=8% Similarity=-0.050 Sum_probs=36.2
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCC-eEEEEeC----------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGP-LMYMHLG----------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~~----------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+ |..+.+. |.-+|-..+++.++..+..
T Consensus 11 l~V~nLp~-----~~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 11 LFIGGIPK-----MKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEECCCT-----TSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCC-----cCCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 34566552 2345678899999998 8888764 3457778899999999864
No 160
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.70 E-value=71 Score=18.79 Aligned_cols=50 Identities=16% Similarity=0.172 Sum_probs=35.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 18 LFVGNLPP-----DITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp EEEESCCT-----TCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 45566653 23456688899999998877764 4466777889888888854
No 161
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=34.62 E-value=77 Score=19.19 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=35.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 29 l~V~nLp~-----~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 87 (108)
T 2jrs_A 29 LYVGSLHF-----NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 87 (108)
T ss_dssp EEEECCCS-----SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34565542 33456788899999998777653 3457888899999999863
No 162
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.58 E-value=48 Score=19.73 Aligned_cols=50 Identities=20% Similarity=0.179 Sum_probs=35.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+.+.. .-+|...+++.++..+..
T Consensus 18 l~V~nlp~-----~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 18 IRVTNLSE-----DTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEEESCCT-----TCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 44566552 234456778888999988776632 347788899999999864
No 163
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=34.55 E-value=72 Score=18.82 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=30.8
Q ss_pred CchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+||.|..+.+. |.-+|...+++.+...+..
T Consensus 40 ~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 82 (101)
T 2la4_A 40 TEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 82 (101)
T ss_dssp CHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 456788899999998877764 4467777899988888854
No 164
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.53 E-value=71 Score=18.73 Aligned_cols=51 Identities=8% Similarity=0.017 Sum_probs=36.2
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeE-EEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLM-YMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~-~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
--++|+++. .-..+.+.++..+||+|. .+.+. |.-+|-..+++.++..+..
T Consensus 11 ~l~V~nLp~-----~~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 11 SLWMGDLEP-----YMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp EEEECSCCT-----TCCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 345666653 334567889999999987 76653 2357778899999999864
No 165
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=34.41 E-value=79 Score=19.20 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=38.3
Q ss_pred CCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 39 RFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
..-++||++. .--...+.++..+||+|..+.+. |.-+|-..+.+.++..+..
T Consensus 22 ~~l~V~NLp~-----~~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 22 PVVHIRGLID-----GVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp SEEEEESCCT-----TCCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred cEEEEeCCCC-----CCCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3456677763 33456788999999999887763 5678888899988888754
No 166
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.35 E-value=74 Score=18.86 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=38.8
Q ss_pred CCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHH-cCccc
Q 037570 39 RFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKN-HDIVF 100 (254)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~-~~~~~ 100 (254)
.--++|+++.- -....+.++..+||+|..+.+. +.-+|...+++.++..+.. +...+
T Consensus 16 ~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2d9p_A 16 VNLYVKNLDDG-----IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIV 80 (103)
T ss_dssp CCEEEECCCTT-----CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBS
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEe
Confidence 34556666532 3446678888899998877654 3467888899999998864 43334
No 167
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=34.31 E-value=85 Score=21.82 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=37.1
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
--++||++. .--.+.+.++.++||+|..+.+. |.-+|-..+++.+...+..
T Consensus 17 tlfVgnLp~-----~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 17 SLYVGDLHP-----DVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp EEEEESCCT-----TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 345677652 33456788999999999877652 2357888899999998865
No 168
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.13 E-value=72 Score=18.69 Aligned_cols=40 Identities=10% Similarity=0.182 Sum_probs=31.8
Q ss_pred CchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 26 t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 26 TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 456788999999999888875 4467778899999998854
No 169
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=33.70 E-value=77 Score=18.91 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=30.7
Q ss_pred CchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 42 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 42 SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456688899999998777653 2457778899999988864
No 170
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=33.54 E-value=66 Score=19.94 Aligned_cols=39 Identities=8% Similarity=0.031 Sum_probs=30.3
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~ 94 (254)
..+.+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 49 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 96 (124)
T 2jwn_A 49 TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVA 96 (124)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHh
Confidence 456788999999998777652 235788889999999883
No 171
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=33.47 E-value=54 Score=20.14 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=30.6
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 53 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 53 TDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp CHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 456788888999998888764 2346777899999888864
No 172
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=33.28 E-value=74 Score=18.58 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=27.3
Q ss_pred hHHHHHHHhhCCe---EEEEeCCcCeEEec-----cHHHHHHHHHH
Q 037570 58 GSLQALSKKYGPL---MYMHLGYSPTLVVS-----SAEIAREIIKN 95 (254)
Q Consensus 58 ~~~~~~~~~yG~i---~~~~~~~~~~vvv~-----dp~~ik~il~~ 95 (254)
+...+++++|.++ +++..++.+-+-|+ |-+.+.+++++
T Consensus 24 EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLqE 69 (81)
T 1ghh_A 24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQE 69 (81)
T ss_dssp HHHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHHH
Confidence 3456788899985 99998888888874 34556666643
No 173
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.06 E-value=76 Score=18.60 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=35.0
Q ss_pred ccccccccccCCCCCCchHHH----HHHHhhCCeEEEEeC------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQ----ALSKKYGPLMYMHLG------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~----~~~~~yG~i~~~~~~------~~~~vvv~dp~~ik~il~~ 95 (254)
-++||++.- -..+.+. ++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 l~V~nL~~~-----~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 12 VQVSNIDYR-----LSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEESCCTT-----SCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCC-----CCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 455666532 2334444 899999999888874 3467788899999888863
No 174
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=32.98 E-value=75 Score=18.54 Aligned_cols=40 Identities=13% Similarity=0.236 Sum_probs=31.3
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 15 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 15 TEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp CHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 456688999999999888763 3457788899999988854
No 175
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.78 E-value=80 Score=18.78 Aligned_cols=52 Identities=10% Similarity=0.062 Sum_probs=35.6
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----------CcCeEEeccHHHHHHHHHHcC
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~vvv~dp~~ik~il~~~~ 97 (254)
--++|+++. .--.+.+.++..+|| |..+.+. |.-+|-..+++.++..+..+.
T Consensus 17 ~l~V~nlp~-----~~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 78 (104)
T 1wi8_A 17 TAFLGNLPY-----DVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNE 78 (104)
T ss_dssp EEEEESCCS-----SCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGT
T ss_pred EEEEeCCCC-----cCCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCC
Confidence 345566652 234566888889999 8888763 235678889999999884333
No 176
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=32.73 E-value=70 Score=18.12 Aligned_cols=40 Identities=10% Similarity=0.223 Sum_probs=31.0
Q ss_pred CchHHHHHHHhhCCeEEEEe----------CCcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHL----------GYSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~----------~~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+ -|.-+|...+++.++..+..
T Consensus 17 t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 17 TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp CHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 45678888999999877765 23467888899999999874
No 177
>1b7f_A Protein (SXL-lethal protein), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3; splicing regulation, RNP domain, RNA complex; 2.60A {Drosophila melanogaster} SCOP: d.58.7.1 d.58.7.1 PDB: 3sxl_A* 1sxl_A 2sxl_A
Probab=32.31 E-value=1e+02 Score=19.98 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=31.6
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++.++||+|..+.+. |.-.|-..+++.++..+..
T Consensus 16 ~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~a~~~ 64 (168)
T 1b7f_A 16 TDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKV 64 (168)
T ss_dssp CHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEEeCCCCccceEEEEEECCHHHHHHHHHh
Confidence 456688999999999887753 3467888899999999863
No 178
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=32.24 E-value=1.1e+02 Score=20.20 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=31.3
Q ss_pred CchHHHHHHHhhC--CeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYG--PLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG--~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++..+|| +|..+.+. |.-+|...+++.++..+..
T Consensus 68 te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 68 TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3467889999999 88877752 2357888899999999876
No 179
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=31.94 E-value=1.2e+02 Score=20.53 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=31.6
Q ss_pred CchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 101 te~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~ 148 (177)
T 2f3j_A 101 SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQ 148 (177)
T ss_dssp CHHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHH
Confidence 456788999999998887763 3457888899999998874
No 180
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=31.53 E-value=1.1e+02 Score=24.50 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=36.8
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
.-++||+.. ......+.+++.+||+|..+.+. |.-+|...+++.+..++..
T Consensus 104 ~lfV~nL~~-----~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNY-----DTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 345666653 23456788899999999887763 3467888899999998855
No 181
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.14 E-value=85 Score=18.62 Aligned_cols=50 Identities=24% Similarity=0.183 Sum_probs=36.8
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 18 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 18 VYVGGLDE-----KVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEEECCCT-----TCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 44566652 334567889999999998887632 356888899999999975
No 182
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.99 E-value=87 Score=18.70 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=38.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEE-EEeC--------CcCeEEeccHHHHHHHHHHcCcccCCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMY-MHLG--------YSPTLVVSSAEIAREIIKNHDIVFSNR 103 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~-~~~~--------~~~~vvv~dp~~ik~il~~~~~~~~~~ 103 (254)
-++|+++. .--.+.+.++.+.||.|.. +.+. |.-+|...+++.++..+..+...+..+
T Consensus 18 l~V~nLp~-----~~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr 84 (104)
T 1wg5_A 18 VRLRGLPF-----GCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 84 (104)
T ss_dssp EEEESCCT-----TCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCc
Confidence 35566652 3345678888899998754 5432 446788899999999997644444333
No 183
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.88 E-value=91 Score=18.87 Aligned_cols=51 Identities=14% Similarity=0.223 Sum_probs=37.4
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
.-++||++. .--...+.++..+||.|..+.+. +.-+|-..+.+.+...+..
T Consensus 17 ~l~V~nLp~-----~~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 70 (104)
T 1wex_A 17 VVHVRGLCE-----SVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTF 70 (104)
T ss_dssp EEEEESCCS-----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 455677652 33456788999999999888764 4577888899988888763
No 184
>1fxl_A Paraneoplastic encephalomyelitis antigen HUD; protein-RNA complex, AU-rich element, transcription/RNA complex; 1.80A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1g2e_A 1fnx_H 1d8z_A 1d9a_A 3hi9_A
Probab=30.87 E-value=1.1e+02 Score=19.78 Aligned_cols=40 Identities=13% Similarity=0.035 Sum_probs=31.2
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++.++||+|..+.+. |.-.|-..+++.++..+..
T Consensus 15 ~~~~l~~~f~~~G~i~~v~~~~~~~~~~~~g~afV~f~~~~~A~~a~~~ 63 (167)
T 1fxl_A 15 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 63 (167)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEeCCCCCcceeEEEEEECCHHHHHHHHHH
Confidence 456688999999998777653 3357888999999999864
No 185
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.53 E-value=88 Score=18.59 Aligned_cols=52 Identities=10% Similarity=0.152 Sum_probs=36.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHHcC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~~~ 97 (254)
-++|+++. .-....+.++..+||+|..+.+.. .-+|-..+++.++.++..+.
T Consensus 19 l~V~nlp~-----~~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~ 79 (105)
T 2dh8_A 19 LFVGGLDW-----STTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 79 (105)
T ss_dssp ECCBSCCT-----TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCS
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCC
Confidence 44566652 334567889999999987776532 35677889999999987643
No 186
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=30.00 E-value=94 Score=19.98 Aligned_cols=49 Identities=16% Similarity=0.162 Sum_probs=35.5
Q ss_pred cccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC-----cCeEEeccHHHHHHHHHH
Q 037570 42 ITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY-----SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~-----~~~vvv~dp~~ik~il~~ 95 (254)
++||+. + .--.+.+.++..+||.|-.+.+.. .-+|...|++.++..+..
T Consensus 32 ~V~NL~-~----~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 32 IVENLF-Y----PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEESCC-S----CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCC-C----CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 466665 2 335567899999999988777642 367888898888887753
No 187
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=29.91 E-value=1.1e+02 Score=19.35 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=31.4
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 76 ~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 76 DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp CHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 446788999999999888763 2357788899999998854
No 188
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=28.57 E-value=2e+02 Score=22.14 Aligned_cols=57 Identities=9% Similarity=-0.011 Sum_probs=41.7
Q ss_pred CCCCCCccccccc-cccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 35 PSPPRFPITGNLH-QLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 35 pgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
..|...-++||+. .+ .--.+.+.+...+||.|..+.+. |.-+|-..+.+.++..+..
T Consensus 15 ~~ps~~l~VgN~gl~~----~~te~~L~~~F~~~G~V~~v~~~~~kgfaFV~f~~~~~A~~Ai~~ 75 (345)
T 3tht_A 15 SYATQSLVVANGGLGN----GVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 75 (345)
T ss_dssp SSCCSEEEEETCSGGG----TCCHHHHHHHHHTTSCEEEEECCTTCSEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCC----CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3454456778863 33 45667889999999999888763 4467777899988888865
No 189
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=27.84 E-value=97 Score=18.22 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=31.9
Q ss_pred CchHHHHHHHhhCCeEEEEeC-CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG-YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~-~~~~vvv~dp~~ik~il~~ 95 (254)
....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 36 t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 36 SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 345688899999999888763 5677888899999998864
No 190
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.92 E-value=90 Score=17.53 Aligned_cols=50 Identities=12% Similarity=0.174 Sum_probs=36.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 15 l~V~~l~~-----~~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 15 LYVGGLGD-----TITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp EEEECCTT-----TSCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred EEEcCCCC-----CCCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 44566652 33456788899999998887764 4567788899999999863
No 191
>1x5o_A RNA binding motif, single-stranded interacting protein 1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.69 E-value=92 Score=18.87 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=34.7
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 28 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 85 (114)
T 1x5o_A 28 LYISNLPL-----SMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGH 85 (114)
T ss_dssp EEEESCCT-----TCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCEEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 34555542 23456678888899998877653 2356777899999988864
No 192
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=26.45 E-value=1e+02 Score=20.08 Aligned_cols=41 Identities=12% Similarity=0.206 Sum_probs=31.2
Q ss_pred CchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHHc
Q 037570 56 PHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKNH 96 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~~ 96 (254)
....+.+...+||+|..+.+.. .-.|-..+++.+...+..+
T Consensus 100 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 149 (167)
T 2cjk_A 100 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 149 (167)
T ss_dssp CHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCS
T ss_pred CHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCC
Confidence 4566888899999988777542 3467788999999998643
No 193
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.40 E-value=1.1e+02 Score=18.32 Aligned_cols=41 Identities=7% Similarity=0.093 Sum_probs=30.3
Q ss_pred hHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHHcCc
Q 037570 58 GSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKNHDI 98 (254)
Q Consensus 58 ~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~~~~ 98 (254)
..+.+....||.++.+++ .++-+|...|.+.+..++..+..
T Consensus 30 ~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG~ 71 (91)
T 2dnr_A 30 DELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGK 71 (91)
T ss_dssp HHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTTC
T ss_pred HHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCCe
Confidence 456677778999998885 45677778899988888764433
No 194
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=26.16 E-value=1.1e+02 Score=18.10 Aligned_cols=44 Identities=5% Similarity=-0.025 Sum_probs=31.2
Q ss_pred CchHHHHHHHhhCCeEEEEeC----------CcCeEEeccHHHHHHHHHHcCccc
Q 037570 56 PHGSLQALSKKYGPLMYMHLG----------YSPTLVVSSAEIAREIIKNHDIVF 100 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~----------~~~~vvv~dp~~ik~il~~~~~~~ 100 (254)
-.+.+.++..+|| |..+.+. |.-+|...+++.++..+..+...+
T Consensus 32 t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~Ai~l~g~~~ 85 (100)
T 2j76_E 32 TEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 85 (100)
T ss_dssp SSSHHHHHSCSSC-EEEEECSCCTTTTCCCCSCEEEEECCHHHHHHHHHTTTCCB
T ss_pred CHHHHHHHHHhcC-CeEEEEEecCCcCCccCeEEEEEECCHHHHHHHHhcCCCEE
Confidence 3456788888999 8888763 235678889999999884343333
No 195
>2ghp_A U4/U6 snRNA-associated splicing factor PRP24; RNA chaperone, RNA binding domain, RNA recognition motif, SP factor, snRNP, spliceosome; 2.70A {Saccharomyces cerevisiae} SCOP: d.58.7.1 d.58.7.1 d.58.7.1 PDB: 2go9_A 2kh9_A
Probab=26.12 E-value=99 Score=22.67 Aligned_cols=57 Identities=14% Similarity=0.175 Sum_probs=39.5
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------CcCeEEeccHHHHHHHHHHcCcccC
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------YSPTLVVSSAEIAREIIKNHDIVFS 101 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvv~dp~~ik~il~~~~~~~~ 101 (254)
--++|+++. .--...+.++.++||+|..+.+. |.-+|...+++.++..+..+...+.
T Consensus 43 ~l~V~nLp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~A~~A~~~~~~~~~ 106 (292)
T 2ghp_A 43 TVLVKNLPK-----SYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVG 106 (292)
T ss_dssp EEEEEEECT-----TCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHTTTTCEET
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEEECCHHHHHHHHHhCCcEeC
Confidence 345566652 33456788999999998777652 4567888999999999954433343
No 196
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.10 E-value=98 Score=17.70 Aligned_cols=50 Identities=18% Similarity=0.321 Sum_probs=36.5
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+ -+.-+|-..+++.++..+..
T Consensus 11 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 11 LFIGNLPR-----EATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp EEEESCCS-----SCCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 44566652 2345668899999999887775 35677888899999988853
No 197
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.73 E-value=1.1e+02 Score=18.02 Aligned_cols=58 Identities=14% Similarity=0.124 Sum_probs=39.0
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH-cCcccCC
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN-HDIVFSN 102 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~-~~~~~~~ 102 (254)
--++|+++. .-....+.++..+||+|..+.+.. .-+|...+++.++..+.. +...+..
T Consensus 14 ~l~v~nLp~-----~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 81 (102)
T 1x5s_A 14 KLFVGGLSF-----DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 81 (102)
T ss_dssp EEEEESCCT-----TCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTS
T ss_pred EEEEECCCC-----CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 345566652 334567889999999988777643 356778899999988854 4333433
No 198
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.44 E-value=1e+02 Score=17.70 Aligned_cols=50 Identities=26% Similarity=0.302 Sum_probs=36.4
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 13 l~V~nLp~-----~~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 13 LHVGNISP-----TCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEESCCS-----SCCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 44566652 33556788999999998887764 4567778899999888854
No 199
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.38 E-value=1e+02 Score=17.63 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=37.4
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~vvv~dp~~ik~il~~ 95 (254)
--++|+++. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 11 ~l~V~nlp~-----~~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 11 KIFVGNVSA-----ACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CEEEESCCT-----TCCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 345666653 23456788899999999888764 4577788899999988864
No 200
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=25.36 E-value=1.4e+02 Score=19.22 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=37.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~il~~ 95 (254)
-++||++. .--...+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 76 l~V~nl~~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 129 (150)
T 2i2y_A 76 VYVGNLGN-----NGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRE 129 (150)
T ss_dssp EEEESCCS-----CCSCHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHHH
Confidence 45566653 23456688999999999888763 4567888899999988864
No 201
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=24.86 E-value=1.1e+02 Score=17.62 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=28.1
Q ss_pred CchHHHHHHHhhC--CeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYG--PLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG--~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+|| ++..+.+.. .-+|...+++.++..+..
T Consensus 14 t~~~l~~~F~~~G~~~v~~v~i~~~~~~g~~kG~afV~f~~~~~a~~Ai~~ 64 (90)
T 3p5t_L 14 TDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDL 64 (90)
T ss_dssp CHHHHHHHHHTTTCCCCCCEEEEECTTTCCEEEEEEECC-CHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCceEEEEEEecCCCCccCcEEEEEECCHHHHHHHHHH
Confidence 4566888999999 776665421 256777899999888853
No 202
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=24.62 E-value=1.1e+02 Score=17.80 Aligned_cols=56 Identities=16% Similarity=0.224 Sum_probs=39.0
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHH-cCccc
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKN-HDIVF 100 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~-~~~~~ 100 (254)
-++|+++.- .-....+.++..+||+|..+.+ -|.-+|-..+++.++..+.. +...+
T Consensus 13 l~V~nlp~~----~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~ 70 (96)
T 2kvi_A 13 LFIGNLPLK----NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMN 70 (96)
T ss_dssp EEEESSTTS----CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSC
T ss_pred EEEeCCCcc----cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCee
Confidence 345666531 1234568889999999887776 35678888999999999874 43333
No 203
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=24.58 E-value=50 Score=16.96 Aligned_cols=11 Identities=27% Similarity=0.697 Sum_probs=8.6
Q ss_pred CCccccccccc
Q 037570 39 RFPITGNLHQL 49 (254)
Q Consensus 39 ~~p~~G~~~~~ 49 (254)
.+|++||.+.-
T Consensus 30 ~ipilgn~fs~ 40 (57)
T 1b35_D 30 HIPVLGNIFST 40 (57)
T ss_dssp CCCCSCCSSSS
T ss_pred ccccccccccc
Confidence 57999998755
No 204
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=24.53 E-value=44 Score=19.90 Aligned_cols=39 Identities=8% Similarity=0.122 Sum_probs=29.7
Q ss_pred CchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~ 94 (254)
-.+.+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 22 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 22 DETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred CHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 456688899999998877653 345677778888888886
No 205
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.44 E-value=1.1e+02 Score=17.67 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=34.5
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEE-EeC---------CcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYM-HLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~-~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+ .+. +.-+|-..+++.++..+..
T Consensus 8 l~V~nLp~-----~~t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 67 (96)
T 1x5t_A 8 IFIGNLDP-----EIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 67 (96)
T ss_dssp EEEECCCT-----TCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHT
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 34555542 23456788999999987655 442 3457888899999999863
No 206
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.36 E-value=1.1e+02 Score=17.76 Aligned_cols=51 Identities=12% Similarity=0.072 Sum_probs=36.8
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
--++|+++. .-..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 19 ~l~V~nlp~-----~~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~ 72 (97)
T 1why_A 19 RLWVGGLGP-----NTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 72 (97)
T ss_dssp CEEEECCCS-----SCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 345566653 23456788999999999888764 3467777899999888864
No 207
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=24.18 E-value=97 Score=17.98 Aligned_cols=40 Identities=10% Similarity=-0.003 Sum_probs=29.6
Q ss_pred CchHHHHHHHhhC-CeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYG-PLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG-~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
-.+.+.++.++|| +|..+.+. |.-.|-..+++.++..+..
T Consensus 14 te~~l~~~F~~~G~~v~~v~i~~d~~t~~~rg~aFV~F~~~~~A~~Ai~~ 63 (91)
T 2lxi_A 14 TEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEA 63 (91)
T ss_dssp CHHHHHHHHHHHTCCCSBCCSSSCSSSCCCSSEEEEECSSHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCEeEEEEEEecCCCCCcCceEEEEecCHHHHHHHHHh
Confidence 4567888999999 66666542 2356888899999998864
No 208
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.48 E-value=1.3e+02 Score=18.04 Aligned_cols=50 Identities=16% Similarity=0.212 Sum_probs=35.4
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC------cCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~------~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .--.+.+.++..+||+|..+.+.. .-+|...+++.++..+..
T Consensus 25 l~V~nLp~-----~~t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~~ 80 (109)
T 1x4a_A 25 IYVGNLPP-----DIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYG 80 (109)
T ss_dssp EEEESCCT-----TCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHHH
Confidence 34555542 234567889999999997776532 347888899999998853
No 209
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=23.27 E-value=1.3e+02 Score=18.11 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=25.6
Q ss_pred HHHHH-HhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHH
Q 037570 60 LQALS-KKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 60 ~~~~~-~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~ 95 (254)
+.+.. .+||+|..+.+. |.-.|-..+++.++.....
T Consensus 43 l~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~ 87 (104)
T 1jmt_A 43 VFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVID 87 (104)
T ss_dssp HHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHH
Confidence 34445 899999888874 2345667788888877754
No 210
>2hgn_A Heterogeneous nuclear ribonucleoprotein F; RNA recognition motif, G-tract, G-quadruplex, alternative splicing, RNA binding protein; NMR {Homo sapiens} PDB: 2kg1_A
Probab=22.83 E-value=1.6e+02 Score=19.00 Aligned_cols=57 Identities=9% Similarity=0.063 Sum_probs=38.1
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC--------CcCeEEeccHHHHHHHHHHcCcccCCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG--------YSPTLVVSSAEIAREIIKNHDIVFSNR 103 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvv~dp~~ik~il~~~~~~~~~~ 103 (254)
-++||++. .-..+.+.++.++|| +..+.+. |.-+|...+++.++..+..+...+..|
T Consensus 49 lfV~nLp~-----~~te~dL~~~F~~~G-i~~v~i~~d~~g~srGfaFV~F~~~e~A~~Al~~~g~~l~gR 113 (139)
T 2hgn_A 49 VHMRGLPY-----KATENDIYNFFSPLN-PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHR 113 (139)
T ss_dssp EECCSCCT-----TCCHHHHHHHHCSCC-CSEEECCCSSSSCSSCCCEEECSHHHHHHHHTTCCSCSSSSC
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcC-CeEEEEEECCCCCCceEEEEEeCCHHHHHHHHhhCCCEECCE
Confidence 34565542 334567889999999 5566653 346788899999999985444444444
No 211
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=22.42 E-value=1.3e+02 Score=17.79 Aligned_cols=50 Identities=16% Similarity=0.212 Sum_probs=35.9
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 16 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (106)
T 2dgp_A 16 LFIGQIPR-----NLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 74 (106)
T ss_dssp EEEESCCT-----TCCHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 44566652 334567889999999988887632 356778899999988864
No 212
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=22.42 E-value=1.3e+02 Score=17.97 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=31.2
Q ss_pred CCchHHHHHHHhhCCeEEEEe-CCcCeEEeccHHHHHHHHHH
Q 037570 55 LPHGSLQALSKKYGPLMYMHL-GYSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 55 ~~~~~~~~~~~~yG~i~~~~~-~~~~~vvv~dp~~ik~il~~ 95 (254)
--.+.+.++..+||+|..+.+ -+.-+|-..+++.++..+..
T Consensus 40 ~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 81 (110)
T 1wf1_A 40 VKKSDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLG 81 (110)
T ss_dssp CCHHHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 345678899999999877765 34567777899988888854
No 213
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=22.39 E-value=1.5e+02 Score=18.39 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=40.3
Q ss_pred CCCCCCCccccccccccCC-----CCCCchHHHHHHHhhCCeEEEEeC-----CcCeEEeccHHHHHHHHHH-cCcccCC
Q 037570 34 PPSPPRFPITGNLHQLLGT-----ATLPHGSLQALSKKYGPLMYMHLG-----YSPTLVVSSAEIAREIIKN-HDIVFSN 102 (254)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~vvv~dp~~ik~il~~-~~~~~~~ 102 (254)
+|.|...-++-|+...... .....+.+.+...+||.|..+.+. |.-.|-..+++.++..+.. ++..|..
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 4555555555555543110 011223456667789999888763 4456777789888877754 4444443
Q ss_pred C
Q 037570 103 R 103 (254)
Q Consensus 103 ~ 103 (254)
|
T Consensus 83 R 83 (114)
T 3s6e_A 83 K 83 (114)
T ss_dssp E
T ss_pred E
Confidence 3
No 214
>1dp3_A TRAM protein; helix-loop-helix, DNA binding protein; NMR {Escherichia coli} SCOP: a.55.1.2
Probab=22.36 E-value=99 Score=16.42 Aligned_cols=33 Identities=9% Similarity=0.268 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCccHHHHhhc
Q 037570 214 VDVLFDQVIEKHRISGSDDDHPNRKDLVHVYSN 246 (254)
Q Consensus 214 ~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~ 246 (254)
+.+-+.+++++++++-..+++-+-.+.-+.||+
T Consensus 11 v~~~I~~ive~r~qeGA~~~dvs~Ssv~smLle 43 (55)
T 1dp3_A 11 IVYKINKIVERRRAEGAKSTDVSFSSISTMLLE 43 (55)
T ss_dssp HHHHHHHHHHHHHHHTCCSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccHHHHHHHHHH
Confidence 345566777788877543212222344555554
No 215
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=22.11 E-value=1.5e+02 Score=18.45 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=38.6
Q ss_pred CCccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC-------------CcCeEEeccHHHHHHHHHH-cCcccCCC
Q 037570 39 RFPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG-------------YSPTLVVSSAEIAREIIKN-HDIVFSNR 103 (254)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------------~~~~vvv~dp~~ik~il~~-~~~~~~~~ 103 (254)
..-++.|+..-.....+..+.+.+...+||+|..+.+. |.-.|-..+++.++..... +...|..|
T Consensus 21 ~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~GR 99 (118)
T 3ue2_A 21 TVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR 99 (118)
T ss_dssp CEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 34555666433111134556677888899998877653 2235666788888777754 44444433
No 216
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.07 E-value=1.3e+02 Score=17.59 Aligned_cols=50 Identities=16% Similarity=0.051 Sum_probs=36.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhh--CCeEEEEe-CCcCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKY--GPLMYMHL-GYSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~-~~~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-....+.++..+| |.|..+.+ -+.-+|-..+++.++..+..
T Consensus 18 l~V~nLp~-----~~t~~~l~~~F~~~g~g~v~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (99)
T 2cpd_A 18 LYVRNLML-----STSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKA 70 (99)
T ss_dssp EEEESCCT-----TCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCcceEEEEEeCCeEEEEeCCHHHHHHHHHH
Confidence 45566652 23456788999999 88888775 35677888899999998863
No 217
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=21.74 E-value=51 Score=14.35 Aligned_cols=9 Identities=44% Similarity=0.811 Sum_probs=4.5
Q ss_pred CCCCCCCCc
Q 037570 33 LPPSPPRFP 41 (254)
Q Consensus 33 ~~pgp~~~p 41 (254)
.+|||++-|
T Consensus 4 gppgprgqp 12 (31)
T 4gyx_A 4 GPPGPRGQP 12 (31)
T ss_dssp CCCCCCCCC
T ss_pred CCCCCCCCC
Confidence 455555444
No 218
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.68 E-value=85 Score=19.80 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=33.6
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCe------EEEEe------CCcCeEEeccHHHHHHHHHHc
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPL------MYMHL------GYSPTLVVSSAEIAREIIKNH 96 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i------~~~~~------~~~~~vvv~dp~~ik~il~~~ 96 (254)
-++|+++. .--.+.+.++.++||+| +.+-. -|.-+|...+++.++..+..+
T Consensus 26 v~V~nLp~-----~~te~dl~~~F~~~g~v~g~v~~v~i~~d~~gr~~G~aFV~F~~~~~A~~Al~~~ 88 (123)
T 2dha_A 26 VRMRGLPF-----TATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKH 88 (123)
T ss_dssp EEECSCCT-----TCCHHHHHHHHHTTSCCTTGGGGEEEEECTTSCEEEEEEECCSSHHHHHHHHTTT
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhhCCccCCcceEEEEECCCCCEeeEEEEEECCHHHHHHHHHhC
Confidence 34555542 33556788999999974 23321 134678888999999999653
No 219
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=21.39 E-value=78 Score=23.55 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=30.7
Q ss_pred ceeeeCCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhccccccc
Q 037570 117 QDIGFSPYGEYWRQARKTCVLGLLN---VILTVSNNIVSRSVLGRRAEEE 163 (254)
Q Consensus 117 ~~~~~~~~g~~w~~~R~~l~~~f~~---~~~~~~~dvi~~~~fG~~~~~~ 163 (254)
.||..+ +++|.+. .|+|.. +...+++|.||.-.||.++++.
T Consensus 23 AGI~lT--~~qW~~i----~p~F~eDkayS~e~ALn~iCtr~fG~DLdSG 66 (324)
T 3trk_A 23 AGIKLN--DRQWSQI----IQAFKEDKAYSPEVALNEICTRMYGVDLDSG 66 (324)
T ss_dssp TTCCCC--HHHHHHH----CHHHHTTCCCCHHHHHHHHHHHHHSSCGGGC
T ss_pred cCcccc--HHHHHHh----hhhhhccCccCHHHHHHHHHHHHhccccCcc
Confidence 344443 6888753 455655 6788999999999999999865
No 220
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.35 E-value=1.6e+02 Score=18.36 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=32.0
Q ss_pred CchHHHHHHHhhCCeEEEEeC---CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.+...+||.|..+.+. |.-+|-..+++.+++.+..
T Consensus 40 te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 40 SRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp CHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 457789999999999888764 3467888899988888864
No 221
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=21.32 E-value=72 Score=20.01 Aligned_cols=16 Identities=25% Similarity=0.557 Sum_probs=13.3
Q ss_pred HHHHHHhhCCeEEEEe
Q 037570 60 LQALSKKYGPLMYMHL 75 (254)
Q Consensus 60 ~~~~~~~yG~i~~~~~ 75 (254)
..++.++||.+|++.+
T Consensus 10 ~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 10 TDELKQKYGRVYEIRI 25 (114)
T ss_dssp HHHHHHHHSSEEEEEE
T ss_pred HHHHHHHhCceEEEEe
Confidence 4788999999999854
No 222
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=21.22 E-value=1.2e+02 Score=17.00 Aligned_cols=48 Identities=13% Similarity=0.244 Sum_probs=34.3
Q ss_pred cccccccccCCCCCCchHHHHHHHhh----C-------CeEEEEeC---CcCeEEeccHHHHHHHHH
Q 037570 42 ITGNLHQLLGTATLPHGSLQALSKKY----G-------PLMYMHLG---YSPTLVVSSAEIAREIIK 94 (254)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~~~~y----G-------~i~~~~~~---~~~~vvv~dp~~ik~il~ 94 (254)
++||++. .-..+.+.++..+| | ++..+.+. |.-+|-..+++.++..+.
T Consensus 10 ~V~nLp~-----~~t~~~l~~~F~~~~~~~g~~~~~~~~v~~~~~~~~kg~afV~f~~~~~a~~A~~ 71 (87)
T 2hzc_A 10 YVGNIPF-----GITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA 71 (87)
T ss_dssp EEESCCT-----TCCHHHHHHHHHHHHHHTTCCSSSSCSEEEEEECSSSSEEEEEESSHHHHHHHGG
T ss_pred EEeCCCC-----CCCHHHHHHHHHHHhhhcccccCCCCcceEEEecCCCcEEEEEcCCHHHHHHHHh
Confidence 4566552 23456678888888 8 88888764 456788889999988883
No 223
>1qm9_A Polypyrimidine tract-binding protein; ribonucleoprotein, RNP, RNA, spicing, translation; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1
Probab=21.22 E-value=2e+02 Score=19.41 Aligned_cols=47 Identities=13% Similarity=0.107 Sum_probs=35.1
Q ss_pred chHHHHHHHhhCCeEEEEeC----CcCeEEeccHHHHHHHHH-HcCcccCCC
Q 037570 57 HGSLQALSKKYGPLMYMHLG----YSPTLVVSSAEIAREIIK-NHDIVFSNR 103 (254)
Q Consensus 57 ~~~~~~~~~~yG~i~~~~~~----~~~~vvv~dp~~ik~il~-~~~~~~~~~ 103 (254)
.+.+.++..+||+|..+.+. |.-+|-..+++.++..+. -+...+..+
T Consensus 18 ~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~g~ 69 (198)
T 1qm9_A 18 PQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGK 69 (198)
T ss_dssp HHHHHHHHHTTCCCSEEECSTTCSSCCEEECTTTHHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCeecCe
Confidence 46788899999999888764 557888899999999886 344444333
No 224
>2ki2_A SS-DNA binding protein 12RNP2; HP0827, RRM, SS-DNA binding proteins, RNA binding protein/SS-DNA binding protein complex; NMR {Helicobacter pylori}
Probab=21.16 E-value=98 Score=17.65 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=27.6
Q ss_pred CchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHH
Q 037570 56 PHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 56 ~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~ 95 (254)
..+.+.++..+||+|..+.+. |.-+|-..+++ +...+..
T Consensus 14 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~-a~~a~~~ 61 (90)
T 2ki2_A 14 TSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEES-VSEAIAK 61 (90)
T ss_dssp SHHHHTTTHHHHTCCSEEEECCCSSSCCCCEEEEEEECTTH-HHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEEEcCCCCCcceEEEEEECCHH-HHHHHHH
Confidence 345677788899998777763 23567778888 7777754
No 225
>2kn4_A Immunoglobulin G-binding protein G, splicing FACT arginine/serine-rich 2, S35, splicing factor SC35,; RRM domain, cell WALL; NMR {Streptococcus SP}
Probab=21.01 E-value=1.8e+02 Score=18.83 Aligned_cols=50 Identities=14% Similarity=0.109 Sum_probs=36.3
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 73 l~v~nl~~-----~~~~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 131 (158)
T 2kn4_A 73 LKVDNLTY-----RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 131 (158)
T ss_dssp EEEESCCT-----TCCHHHHHHHHHHHSCEEEEECCCCSSCTTSCCEEEEEESBHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEeecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34555542 334567888999999998887643 257888899999999965
No 226
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.82 E-value=1.4e+02 Score=17.62 Aligned_cols=57 Identities=12% Similarity=0.128 Sum_probs=39.3
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC----------cCeEEeccHHHHHHHHHH--cCcccCC
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY----------SPTLVVSSAEIAREIIKN--HDIVFSN 102 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~----------~~~vvv~dp~~ik~il~~--~~~~~~~ 102 (254)
-++|+++. .-....+.++..+||+|..+.+.. .-+|-..+++.++..+.. +...+..
T Consensus 18 l~V~nlp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g 86 (107)
T 2cph_A 18 ILVRNIPF-----QANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYG 86 (107)
T ss_dssp EEEESCCT-----TCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSS
T ss_pred EEEeCCCC-----cCCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECC
Confidence 45566652 334567889999999998887633 346778899999998865 3444433
No 227
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.63 E-value=1.4e+02 Score=17.55 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=34.5
Q ss_pred CccccccccccCCCCCCchHHHHHHHhhCCeEEEEeC---------CcCeEEeccHHHHHHHHHHcC
Q 037570 40 FPITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLG---------YSPTLVVSSAEIAREIIKNHD 97 (254)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvv~dp~~ik~il~~~~ 97 (254)
--++|+++. .--.+.+.++..+|| |..+.+. |.-+|-..+++.++..+..+.
T Consensus 17 ~l~V~nLp~-----~~t~~~l~~~F~~~g-i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 77 (103)
T 2dng_A 17 TAYVGNLPF-----NTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDG 77 (103)
T ss_dssp EEEEESCCT-----TCCHHHHHHHTTTSC-EEEEEEEECSSSCSEEEEEEEEESSHHHHHHHGGGTT
T ss_pred EEEEeCCCC-----CCCHHHHHHHHHhCC-ceEEEEeecCCCCccceEEEEEECCHHHHHHHHhhCC
Confidence 345666652 234566788888897 7776653 234678889999999884333
No 228
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=20.53 E-value=1.5e+02 Score=17.87 Aligned_cols=50 Identities=12% Similarity=0.069 Sum_probs=35.1
Q ss_pred ccccccccccCCCCCCchHHHHHHHhhCCeEEEEeCC---------cCeEEeccHHHHHHHHHH
Q 037570 41 PITGNLHQLLGTATLPHGSLQALSKKYGPLMYMHLGY---------SPTLVVSSAEIAREIIKN 95 (254)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~vvv~dp~~ik~il~~ 95 (254)
-++|+++. .-..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 28 l~V~nLp~-----~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 28 LFIYHLPQ-----EFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp EEEESCCS-----SCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 44566653 234567889999999987766531 356778899999998854
Done!