Query 037575
Match_columns 406
No_of_seqs 211 out of 1457
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 23:46:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037575.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037575hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eysh2 f.23.10.1 (H:7-43) Pho 7.7 1.3E+02 0.0096 17.8 2.4 27 365-393 8-34 (37)
2 d2hi7b1 a.29.15.1 (B:14-162) D 6.4 56 0.0041 25.2 0.2 16 4-19 22-37 (149)
3 d1kcpa_ g.3.6.1 (A:) Conotoxin 6.2 68 0.0049 17.2 0.4 20 9-29 4-23 (27)
4 d3bnea2 b.12.1.1 (A:7-149) Pla 5.4 82 0.006 24.6 0.7 26 23-52 118-143 (143)
5 d3dtub2 f.17.2.1 (B:30-129) Ba 4.8 2.3E+02 0.017 19.9 3.0 21 376-396 45-65 (100)
6 d1pw4a_ f.38.1.1 (A:) Glycerol 4.7 8E+02 0.058 19.9 15.1 14 385-398 434-447 (447)
7 d2iuba2 f.17.3.1 (A:286-349) M 3.8 3.4E+02 0.025 17.2 3.0 13 212-224 9-21 (64)
8 d2nwwa1 f.49.1.1 (A:12-416) Pr 3.7 8E+02 0.058 21.0 6.6 19 242-260 4-22 (405)
9 d2enda_ a.18.1.1 (A:) T4 endon 3.5 1.1E+02 0.0083 23.5 0.1 10 7-16 6-15 (137)
10 d1tueb_ b.91.1.1 (B:) E2 regul 3.0 1.5E+02 0.011 24.1 0.5 13 7-19 108-120 (194)
No 1
>d1eysh2 f.23.10.1 (H:7-43) Photosystem II reaction centre subunit H, transmembrane region {Thermochromatium tepidum [TaxId: 1050]}
Probab=7.73 E-value=1.3e+02 Score=17.77 Aligned_cols=27 Identities=7% Similarity=0.073 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccchh
Q 037575 365 PACSVIAMAIMGLCLASFWGSGSRIRDLT 393 (406)
Q Consensus 365 ~~~y~v~q~i~~~~la~~~~~~~~~~~~~ 393 (406)
.++|..|-...+.+ .+.+|..+||..|
T Consensus 8 l~ly~Fw~FFagLi--~YL~rE~~REGyP 34 (37)
T d1eysh2 8 ITIWAFWLFFFGLI--IYLRREDKREGYP 34 (37)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHTTSSSCS
T ss_pred HHHHHHHHHHHHHH--HHHHhcccccCCC
Confidence 45677777666655 4566666666665
No 2
>d2hi7b1 a.29.15.1 (B:14-162) Disulfide bond formation protein DsbB {Escherichia coli [TaxId: 562]}
Probab=6.37 E-value=56 Score=25.15 Aligned_cols=16 Identities=38% Similarity=0.638 Sum_probs=13.5
Q ss_pred ccCCCCCcchhccccc
Q 037575 4 LLNLTPPKLCIQKRNT 19 (406)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (406)
.+++.|=|+|+..|-.
T Consensus 22 ~~gl~PC~LCi~QR~~ 37 (149)
T d2hi7b1 22 VMLLKPCVLCIYERVA 37 (149)
T ss_dssp TSCCCCCSHHHHHHHH
T ss_pred HcCCCCcHHHHHHHHH
Confidence 4689999999988864
No 3
>d1kcpa_ g.3.6.1 (A:) Conotoxin {Conus purpurascens, kappa-pVIIa [TaxId: 41690]}
Probab=6.19 E-value=68 Score=17.24 Aligned_cols=20 Identities=30% Similarity=0.649 Sum_probs=14.0
Q ss_pred CCcchhccccccccccccccc
Q 037575 9 PPKLCIQKRNTALHSFRCNSI 29 (406)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~ 29 (406)
|..-||||-..- -|+.||.+
T Consensus 4 pnqkcfqhlddc-csrkcnrf 23 (27)
T d1kcpa_ 4 PNQKCFQHLDDC-CSRKCNRF 23 (27)
T ss_dssp TTSBCCTTCCCB-TTSCBCTT
T ss_pred CcHHHHHHHHHH-HHHHhhhh
Confidence 677899997653 46677655
No 4
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
Probab=5.40 E-value=82 Score=24.58 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=16.8
Q ss_pred cccccccccCCcccccccchhhccCCCCCc
Q 037575 23 SFRCNSILKPQKSVKANGGLCTLACSTSPF 52 (406)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (406)
-+.||||..|.++-+..-. -|+|-+|
T Consensus 118 hF~CNSWVyp~~~~~~~RI----FFsNk~Y 143 (143)
T d3bnea2 118 RFVCNSWVYNTKLYKSVRI----FFANHTY 143 (143)
T ss_dssp EEEEEEEECBGGGCSSCEE----EECSCCC
T ss_pred EEeCCCcEeECCCCCCCCE----EecCCCC
Confidence 4789999888776544422 2666655
No 5
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=4.84 E-value=2.3e+02 Score=19.85 Aligned_cols=21 Identities=14% Similarity=0.208 Sum_probs=11.2
Q ss_pred HHHHHHHHhcCccccchhhcc
Q 037575 376 GLCLASFWGSGSRIRDLTNIL 396 (406)
Q Consensus 376 ~~~la~~~~~~~~~~~~~~~~ 396 (406)
+......|+.|+++.+.++++
T Consensus 45 ~~l~~~~~~~r~~~~~~~~~~ 65 (100)
T d3dtub2 45 LLILYAVWRFHEKRNKVPARF 65 (100)
T ss_dssp HHHHHHHHHHBTTTCCSCCCC
T ss_pred HHHHHHhhhhhccCCCCCccc
Confidence 333344566666665555554
No 6
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=4.68 E-value=8e+02 Score=19.88 Aligned_cols=14 Identities=21% Similarity=0.007 Sum_probs=7.0
Q ss_pred cCccccchhhcccc
Q 037575 385 SGSRIRDLTNILNW 398 (406)
Q Consensus 385 ~~~~~~~~~~~~~~ 398 (406)
+++|+||..+|..|
T Consensus 434 ~~~r~~~~~~e~~P 447 (447)
T d1pw4a_ 434 EKRRHEQLLQELVP 447 (447)
T ss_dssp HHHHHHGGGGGSCC
T ss_pred ccccHHHHHHhCCC
Confidence 34444555555543
No 7
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=3.80 E-value=3.4e+02 Score=17.16 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHH
Q 037575 212 TTIASVLITPLLT 224 (406)
Q Consensus 212 stlls~~~~Pl~l 224 (406)
-|.++.+.+|+.+
T Consensus 9 lT~it~iflP~t~ 21 (64)
T d2iuba2 9 LTIIATIFMPLTF 21 (64)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4666777777654
No 8
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=3.68 E-value=8e+02 Score=21.04 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 037575 242 SILQVVLVPVALGLGLNTY 260 (406)
Q Consensus 242 ~ll~~vllPl~lG~llr~~ 260 (406)
+++.-+++=.++|..+++.
T Consensus 4 rili~lv~Gi~~G~~~~~~ 22 (405)
T d2nwwa1 4 KILIGLILGAIVGLILGHY 22 (405)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHccc
Confidence 3344444455555555443
No 9
>d2enda_ a.18.1.1 (A:) T4 endonuclease V {Bacteriophage T4 [TaxId: 10665]}
Probab=3.49 E-value=1.1e+02 Score=23.54 Aligned_cols=10 Identities=20% Similarity=0.043 Sum_probs=8.2
Q ss_pred CCCCcchhcc
Q 037575 7 LTPPKLCIQK 16 (406)
Q Consensus 7 ~~~~~~~~~~ 16 (406)
.+|+.||-||
T Consensus 6 i~p~eL~dqH 15 (137)
T d2enda_ 6 TLVSELADQH 15 (137)
T ss_dssp SCGGGSCHHH
T ss_pred CCHHHhhhHH
Confidence 5788999876
No 10
>d1tueb_ b.91.1.1 (B:) E2 regulatory, transactivation domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=3.04 E-value=1.5e+02 Score=24.12 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=10.1
Q ss_pred CCCCcchhccccc
Q 037575 7 LTPPKLCIQKRNT 19 (406)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (406)
.+||+-||+|.-.
T Consensus 108 ~~~P~~cfKK~g~ 120 (194)
T d1tueb_ 108 NTEPTHCFKKGGQ 120 (194)
T ss_dssp TSSSTTSEEEEEE
T ss_pred cCCCcccCccCCE
Confidence 5789999987643
Done!