Query 037580
Match_columns 143
No_of_seqs 104 out of 161
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 23:51:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037580.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037580hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 99.5 8.1E-14 2.8E-18 112.6 7.5 116 2-132 135-276 (342)
2 1yvv_A Amine oxidase, flavin-c 99.2 2E-11 7E-16 97.0 7.4 117 2-133 131-264 (336)
3 3nks_A Protoporphyrinogen oxid 98.0 7.8E-06 2.7E-10 68.0 6.9 121 2-133 260-404 (477)
4 3lov_A Protoporphyrinogen oxid 97.6 6.8E-05 2.3E-09 62.5 6.1 112 2-133 260-395 (475)
5 3i6d_A Protoporphyrinogen oxid 97.5 7.9E-05 2.7E-09 61.3 4.4 115 2-133 259-398 (470)
6 2ivd_A PPO, PPOX, protoporphyr 97.2 0.00038 1.3E-08 57.9 5.7 117 2-133 261-404 (478)
7 2yg5_A Putrescine oxidase; oxi 95.7 0.0096 3.3E-07 49.0 4.6 117 2-132 238-372 (453)
8 4dsg_A UDP-galactopyranose mut 95.2 0.016 5.4E-07 49.3 4.2 116 2-133 242-381 (484)
9 3ka7_A Oxidoreductase; structu 94.2 0.16 5.6E-06 41.0 7.8 113 2-131 222-358 (425)
10 1s3e_A Amine oxidase [flavin-c 93.6 0.21 7E-06 42.1 7.6 117 2-132 238-374 (520)
11 2iid_A L-amino-acid oxidase; f 91.1 0.97 3.3E-05 37.5 8.5 117 2-133 264-404 (498)
12 2jae_A L-amino acid oxidase; o 90.5 0.055 1.9E-06 45.1 0.3 116 2-132 263-401 (489)
13 3nrn_A Uncharacterized protein 90.2 0.16 5.3E-06 41.4 2.8 64 2-73 215-279 (421)
14 4gut_A Lysine-specific histone 84.1 3.5 0.00012 37.5 8.1 117 2-132 555-697 (776)
15 1b37_A Protein (polyamine oxid 83.9 0.43 1.5E-05 39.6 1.9 116 2-132 240-380 (472)
16 2vvm_A Monoamine oxidase N; FA 82.2 0.43 1.5E-05 39.6 1.3 66 2-74 282-349 (495)
17 4gde_A UDP-galactopyranose mut 73.0 2.8 9.7E-05 34.4 3.6 58 5-73 251-308 (513)
18 2b9w_A Putative aminooxidase; 71.6 2.2 7.4E-05 34.4 2.6 51 2-62 229-280 (424)
19 1rsg_A FMS1 protein; FAD bindi 63.8 1.9 6.5E-05 36.2 0.7 60 6-73 231-304 (516)
20 1sez_A Protoporphyrinogen oxid 62.1 1.5 5.1E-05 36.3 -0.2 112 9-133 280-424 (504)
21 3mb2_B 4-oxalocrotonate tautom 58.9 6.7 0.00023 25.8 2.6 26 112-137 15-40 (72)
22 2z3y_A Lysine-specific histone 38.6 6.6 0.00023 34.5 0.0 118 2-133 422-567 (662)
23 2x4k_A 4-oxalocrotonate tautom 38.2 24 0.00082 20.3 2.6 26 112-137 16-41 (63)
24 3k7m_X 6-hydroxy-L-nicotine ox 35.8 16 0.00055 29.2 1.9 66 2-75 229-297 (431)
25 3m20_A 4-oxalocrotonate tautom 34.1 46 0.0016 19.8 3.5 27 111-137 11-37 (62)
26 1otf_A 4-oxalocrotonate tautom 31.8 35 0.0012 19.8 2.6 26 112-137 13-38 (62)
27 3ry0_A Putative tautomerase; o 31.4 35 0.0012 20.4 2.6 27 111-137 12-38 (65)
28 2opa_A Probable tautomerase YW 30.4 38 0.0013 19.6 2.6 26 112-137 13-38 (61)
29 1gyx_A YDCE, B1461, hypothetic 28.9 35 0.0012 21.3 2.3 28 110-137 12-39 (76)
30 3mb2_A 4-oxalocrotonate tautom 28.9 31 0.0011 21.2 2.1 26 111-136 13-38 (72)
31 3abf_A 4-oxalocrotonate tautom 28.8 30 0.001 20.2 1.9 25 112-136 14-38 (64)
32 2xag_A Lysine-specific histone 28.1 13 0.00043 34.3 0.0 118 2-133 593-738 (852)
33 3m21_A Probable tautomerase HP 23.9 51 0.0017 19.8 2.4 27 111-137 15-41 (67)
34 4dgk_A Phytoene dehydrogenase; 22.7 18 0.0006 29.7 -0.1 66 2-74 247-317 (501)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.46 E-value=8.1e-14 Score=112.62 Aligned_cols=116 Identities=19% Similarity=0.226 Sum_probs=90.5
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCCh----HHHHHHhhcccchhhhhHhhhccC--C
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLP----QIARQMKRLELSSIWALLAAFEDL--L 74 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p----~la~~~~~~~~~pCWalMlaf~~p--l 74 (143)
|++++++|.+. .+|+. -.||.||+|+| ++|+.+||... .| ...+.+..+++.|||++|++|+++ +
T Consensus 135 i~~~~~~~~v~~~~g~~-~~ad~vV~A~p------~~~~~~ll~~~-~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~ 206 (342)
T 3qj4_A 135 INLRDDKWEVSKQTGSP-EQFDLIVLTMP------VPEILQLQGDI-TTLISECQRQQLEAVSYSSRYALGLFYEAGTKI 206 (342)
T ss_dssp EEECSSSEEEEESSSCC-EEESEEEECSC------HHHHTTCBSTH-HHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--
T ss_pred EEEcCCEEEEEECCCCE-EEcCEEEECCC------HHHHHHHhccc-ccccCHHHHHHHhcCCccccEEEEEEECCCCcc
Confidence 45677899997 66643 36899999999 66999999742 22 457888999999999999999975 3
Q ss_pred Ccc--------cc-C-----CCC--CCC---CCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCC
Q 037580 75 PLG--------TK-L-----LSS--QSD---APHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGL 132 (143)
Q Consensus 75 ~~~--------~~-~-----~~s--gr~---~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~ 132 (143)
+.+ .. + +++ +|. +..+||+|++.+|+++|+ +.+.|++.+.++++|++++|.
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~g~ 276 (342)
T 3qj4_A 207 DVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYL-------EHSIEDVQELVFQQLENILPG 276 (342)
T ss_dssp CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTT-------TSCHHHHHHHHHHHHHHHSCS
T ss_pred CCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhh-------cCCHHHHHHHHHHHHHHhccC
Confidence 332 01 1 222 443 346999999999999998 889999999999999999984
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.22 E-value=2e-11 Score=97.04 Aligned_cols=117 Identities=23% Similarity=0.374 Sum_probs=94.2
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccCCCcc---
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDLLPLG--- 77 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~pl~~~--- 77 (143)
+++++++|.+. .+|+....||.||+|+| +.++.+++.. .|.+...+..+.+.+||.+|+.|+.+...+
T Consensus 131 i~~~~~~~~v~~~~g~~~~~a~~vV~a~g------~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (336)
T 1yvv_A 131 VFRGEEHWNLLDAEGQNHGPFSHVIIATP------APQASTLLAA--APKLASVVAGVKMDPTWAVALAFETPLQTPMQG 202 (336)
T ss_dssp EEECSSCEEEEETTSCEEEEESEEEECSC------HHHHGGGGTT--CHHHHHHHTTCCEEEEEEEEEEESSCCSCCCCE
T ss_pred EEEeCCEEEEEeCCCcCccccCEEEEcCC------HHHHHHhhcc--CHHHHHHHhhcCccceeEEEEEecCCCCCCCCe
Confidence 45677899997 77766556899999999 7799999873 678888889999999999999999875432
Q ss_pred ----c-c---C--CCC--CCCCC-ceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 78 ----T-K---L--LSS--QSDAP-HCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 78 ----~-~---~--~~s--gr~~~-e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
. . + ++. +|.+. .+||++.+++|++++. +.+.+++.+.++++|.+.+|..
T Consensus 203 ~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~lg~~ 264 (336)
T 1yvv_A 203 CFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNL-------DASREQVIEHLHGAFAELIDCT 264 (336)
T ss_dssp EEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTT-------TSCHHHHHHHHHHHHHTTCSSC
T ss_pred EEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHH-------hCCHHHHHHHHHHHHHHHhCCC
Confidence 0 0 1 111 45443 6899999999999998 7889999999999999988864
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.05 E-value=7.8e-06 Score=68.03 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=85.4
Q ss_pred CcccCCc-eEEecCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccCC-Ccc--
Q 037580 2 LEPFNGM-WHLSLNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDLL-PLG-- 77 (143)
Q Consensus 2 l~~~~~~-W~L~~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~pl-~~~-- 77 (143)
|++++++ |.+..+|. .-.+|.||+|+| +.++.+||... .+.+.+.+..+.+.+|+.+++.|+++. +..
T Consensus 260 i~~~~~~~~~v~~~~~-~~~ad~vv~a~p------~~~~~~ll~~~-~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~ 331 (477)
T 3nks_A 260 LSLQAEGRWKVSLRDS-SLEADHVISAIP------ASVLSELLPAE-AAPLARALSAITAVSVAVVNLQYQGAHLPVQGF 331 (477)
T ss_dssp EEECGGGCEEEECSSC-EEEESEEEECSC------HHHHHHHSCGG-GHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSS
T ss_pred EEEcCCceEEEEECCe-EEEcCEEEECCC------HHHHHHhcccc-CHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCc
Confidence 3455556 99874443 245899999999 66999999764 678888889999999999999999873 211
Q ss_pred ---ccC-----------CCC---CC--C-CCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 78 ---TKL-----------LSS---QS--D-APHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 78 ---~~~-----------~~s---gr--~-~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
... +++ ++ . +...++++...+|..++.. ...+.+.+++.+.+++.|++++|+.
T Consensus 332 g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~---~~~~~~~~~~~~~~~~~L~~~~g~~ 404 (477)
T 3nks_A 332 GHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEA---SGCVLSQELFQQRAQEAAATQLGLK 404 (477)
T ss_dssp EEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHH---SSCCCCHHHHHHHHHHHHHHHHCCC
T ss_pred eEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcccccccc---ccCCCCHHHHHHHHHHHHHHHhCCC
Confidence 000 111 12 1 3345678888899887630 1113478999999999999999874
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.65 E-value=6.8e-05 Score=62.52 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=76.0
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccCCCccc--
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDLLPLGT-- 78 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~pl~~~~-- 78 (143)
|++++++|.+. .+| .-.+|.||+|+| +.++.+|+... + + +.+..+.+.||+.+++.|+++...+.
T Consensus 260 i~~~~~~~~v~~~~g--~~~ad~vV~a~p------~~~~~~ll~~~--~-~-~~~~~~~~~~~~~v~l~~~~~~~~~~~g 327 (475)
T 3lov_A 260 ISREDGRYRLKTDHG--PEYADYVLLTIP------HPQVVQLLPDA--H-L-PELEQLTTHSTATVTMIFDQQQSLPIEG 327 (475)
T ss_dssp EEEETTEEEEECTTC--CEEESEEEECSC------HHHHHHHCTTS--C-C-HHHHTCCEEEEEEEEEEEECCSSCSSSS
T ss_pred EEEeCCEEEEEECCC--eEECCEEEECCC------HHHHHHHcCcc--C-H-HHHhcCCCCeEEEEEEEECCcCCCCCCC
Confidence 45667789997 666 456899999999 66999998742 2 2 67788899999999999999753210
Q ss_pred -----cCC-----------CC---CCCCCceEEE--EeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 79 -----KLL-----------SS---QSDAPHCWTS--STLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 79 -----~~~-----------~s---gr~~~e~Wvl--hAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
... +. .+. ++.-++ .....+++.+. +.+.|++.+.+++.+++++|..
T Consensus 328 ~g~l~~~~~~~~~~~~~~~s~~~~~~~-p~~~~l~~~~~~~~~~~~~-------~~~~e~~~~~~~~~L~~~~g~~ 395 (475)
T 3lov_A 328 TGFVVNRRAPYSITACTAIDQKWNHSA-PDHTVLRAFVGRPGNDHLV-------HESDEVLQQAVLQDLEKICGRT 395 (475)
T ss_dssp SEEEECTTSSCSEEEEEEHHHHCTTTC-TTEEEEEEEECBTTBCGGG-------GSCHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEecCCCCCceEEEEEEcccCCCCC-CCcEEEEEEeCCCCCCccc-------CCCHHHHHHHHHHHHHHHhCCC
Confidence 000 00 111 112222 22334445554 6788999999999999999864
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.50 E-value=7.9e-05 Score=61.26 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=79.5
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccCCC-cc--
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDLLP-LG-- 77 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~pl~-~~-- 77 (143)
|++++++|.+. .+|+. -.+|.||+|+| ..++.+|+.. +.+.+.+..+.+.+|+.+++.|+++.- .+
T Consensus 259 i~~~~~~~~v~~~~g~~-~~ad~vi~a~p------~~~~~~l~~~---~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~ 328 (470)
T 3i6d_A 259 LSHSGSCYSLELDNGVT-LDADSVIVTAP------HKAAAGMLSE---LPAISHLKNMHSTSVANVALGFPEGSVQMEHE 328 (470)
T ss_dssp EEECSSSEEEEESSSCE-EEESEEEECSC------HHHHHHHTTT---STTHHHHHTCEEEEEEEEEEEESSTTCCCSSC
T ss_pred EEEcCCeEEEEECCCCE-EECCEEEECCC------HHHHHHHcCC---chhhHHHhcCCCCceEEEEEEECchhcCCCCC
Confidence 45667789997 66643 45899999999 6699999864 245677888999999999999998632 11
Q ss_pred -----ccCC-----------C---CCC--CCCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 78 -----TKLL-----------S---SQS--DAPHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 78 -----~~~~-----------~---sgr--~~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
.... + ..+ ++...+++.....|++.+. +.+.+++.+.+++.+++++|..
T Consensus 329 ~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~g~~ 398 (470)
T 3i6d_A 329 GTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIV-------DLSDNDIINIVLEDLKKVMNIN 398 (470)
T ss_dssp SSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGG-------TSCHHHHHHHHHHHHGGGSCCC
T ss_pred CeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCcccc-------CCCHHHHHHHHHHHHHHHhCCC
Confidence 0000 0 011 1222344444556666555 6788999999999999988864
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.25 E-value=0.00038 Score=57.93 Aligned_cols=117 Identities=14% Similarity=0.124 Sum_probs=80.2
Q ss_pred CcccCCceEEec----CCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccCC-Cc
Q 037580 2 LEPFNGMWHLSL----NGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDLL-PL 76 (143)
Q Consensus 2 l~~~~~~W~L~~----~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~pl-~~ 76 (143)
|.+++++|.+.. +|+ .-.+|.||+|+| +.++.+|+... .+...+.+..+++.+|+.+++.|+++. +.
T Consensus 261 i~~~~~~~~v~~~~~~~g~-~~~ad~vV~a~~------~~~~~~ll~~l-~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~ 332 (478)
T 2ivd_A 261 LAREDGGWRLIIEEHGRRA-ELSVAQVVLAAP------AHATAKLLRPL-DDALAALVAGIAYAPIAVVHLGFDAGTLPA 332 (478)
T ss_dssp EECC--CCEEEEEETTEEE-EEECSEEEECSC------HHHHHHHHTTT-CHHHHHHHHTCCBCCEEEEEEEECTTSSCC
T ss_pred EEecCCeEEEEEeecCCCc-eEEcCEEEECCC------HHHHHHHhhcc-CHHHHHHHhcCCCCcEEEEEEEEccccCCC
Confidence 345566788862 443 345899999999 66899999642 446677788889999999999999863 32
Q ss_pred c------cc------C-----CCC---CC--CCCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 77 G------TK------L-----LSS---QS--DAPHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 77 ~------~~------~-----~~s---gr--~~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
+ .. . .++ ++ ++...++++.+..++.... +.+.+++.+.+++.++++++..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~ 404 (478)
T 2ivd_A 333 PDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLV-------EQDEDALAALAREELKALAGVT 404 (478)
T ss_dssp CCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGG-------GSCHHHHHHHHHHHHHHHHCCC
T ss_pred CCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCcccc-------CCCHHHHHHHHHHHHHHHhCCC
Confidence 0 00 0 010 11 2334677888777766554 5678999999999999988753
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.74 E-value=0.0096 Score=49.00 Aligned_cols=117 Identities=14% Similarity=0.064 Sum_probs=76.3
Q ss_pred CcccCCc-eEEecCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCCh-HHHHHHhhcccchhhhhHhhhccCC-C---
Q 037580 2 LEPFNGM-WHLSLNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLP-QIARQMKRLELSSIWALLAAFEDLL-P--- 75 (143)
Q Consensus 2 l~~~~~~-W~L~~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p-~la~~~~~~~~~pCWalMlaf~~pl-~--- 75 (143)
|.+++++ |.+..+|+.+ .+|.||+|+| ..++.+|+.....| ...+.+.++.+.++..+++.|+++. +
T Consensus 238 i~~~~~~~v~v~~~~~~~-~ad~VI~a~p------~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~ 310 (453)
T 2yg5_A 238 VKWNESGATVLADGDIRV-EASRVILAVP------PNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWREDG 310 (453)
T ss_dssp EEEETTEEEEEETTTEEE-EEEEEEECSC------GGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGGT
T ss_pred EEEeCCceEEEEECCeEE-EcCEEEEcCC------HHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCCC
Confidence 3445666 8887544333 4799999999 44777776311133 4556778888889999999998863 1
Q ss_pred cc------c-cC----CCCCCCC-CceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCC
Q 037580 76 LG------T-KL----LSSQSDA-PHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGL 132 (143)
Q Consensus 76 ~~------~-~~----~~sgr~~-~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~ 132 (143)
.. . .+ +++..++ ...++.+...++++... +.+.+++.+.+++.+++.+|.
T Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~l~~L~~~~~~ 372 (453)
T 2yg5_A 311 LSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMF-------ELSAEERKATILASLARYLGP 372 (453)
T ss_dssp EEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHH-------HSCHHHHHHHHHHHHHHHHCG
T ss_pred CCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHh-------cCCHHHHHHHHHHHHHHHhCc
Confidence 10 0 01 2221111 23677777777776654 457788999999999988764
No 8
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.20 E-value=0.016 Score=49.33 Aligned_cols=116 Identities=12% Similarity=0.047 Sum_probs=72.8
Q ss_pred CcccCCceEEecCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcC---CChHHHHHHhhcccchhhhhHhhhccCCCc--
Q 037580 2 LEPFNGMWHLSLNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSS---GLPQIARQMKRLELSSIWALLAAFEDLLPL-- 76 (143)
Q Consensus 2 l~~~~~~W~L~~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~---~~p~la~~~~~~~~~pCWalMlaf~~pl~~-- 76 (143)
|.+++++|.+ .+|+ .-.||.||+|+| ..++.+|+... ..+.+.+.+..+.+.++..+.++|+.+...
T Consensus 242 I~~~~~~v~~-~~G~-~~~ad~VI~a~p------~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~ 313 (484)
T 4dsg_A 242 IDADAKTITF-SNGE-VVSYDYLISTVP------FDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHL 313 (484)
T ss_dssp EETTTTEEEE-TTSC-EEECSEEEECSC------HHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGG
T ss_pred EEecCCEEEE-CCCC-EEECCEEEECCC------HHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccC
Confidence 3455667766 3443 234899999999 66999999641 145778888999999999999999986321
Q ss_pred -c-------c-----cC----CC-C-CCCCCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 77 -G-------T-----KL----LS-S-QSDAPHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 77 -~-------~-----~~----~~-s-gr~~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
+ . .+ ++ + .+.....|++...-.++ ... +.+.|++.+..++.+.++.++.
T Consensus 314 ~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~-------~~~d~~l~~~a~~~L~~~~~~~ 381 (484)
T 4dsg_A 314 KTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYK-------PVNHSTLIEDCIVGCLASNLLL 381 (484)
T ss_dssp TTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTB-------CCCTTSHHHHHHHHHHHTTSCC
T ss_pred CCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCC-------cCCHHHHHHHHHHHHHHcCCCC
Confidence 1 0 00 11 1 22222367665432222 122 3355678888888888775554
No 9
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.22 E-value=0.16 Score=41.01 Aligned_cols=113 Identities=13% Similarity=0.003 Sum_probs=68.2
Q ss_pred CcccCCceE-EecCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCC----ChHHHHHHhhcccchhhhhHhhhccCCCc
Q 037580 2 LEPFNGMWH-LSLNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSG----LPQIARQMKRLELSSIWALLAAFEDLLPL 76 (143)
Q Consensus 2 l~~~~~~W~-L~~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~----~p~la~~~~~~~~~pCWalMlaf~~pl~~ 76 (143)
|.+++++|. +..+|+.. .+|.||+|+| +..+.+||.... .+.+.+.+.+++..+...+.++|++++..
T Consensus 222 i~~~~~~~~gv~~~g~~~-~ad~VV~a~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 294 (425)
T 3ka7_A 222 ILIENGKAAGIIADDRIH-DADLVISNLG------HAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG 294 (425)
T ss_dssp EEEETTEEEEEEETTEEE-ECSEEEECSC------HHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC
T ss_pred EEEECCEEEEEEECCEEE-ECCEEEECCC------HHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccC
Confidence 345566776 55445433 4699999999 668889996321 23566677778788888888999887432
Q ss_pred c---------cc---------CCCC-CCCCCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhC
Q 037580 77 G---------TK---------LLSS-QSDAPHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALG 131 (143)
Q Consensus 77 ~---------~~---------~~~s-gr~~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g 131 (143)
. .. .+++ -..+.....+|....|. +. + ..++..+.+++.+++.++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~--~~-------~-~~~~~~~~~~~~l~~~~p 358 (425)
T 3ka7_A 295 HTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPE--NV-------K-NLESEIEMGLEDLKEIFP 358 (425)
T ss_dssp SSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGG--GG-------G-GHHHHHHHHHHHHHHHST
T ss_pred cCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccc--cc-------c-chHHHHHHHHHHHHHhCC
Confidence 1 00 0111 12233444445544442 22 2 234556888999998874
No 10
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.64 E-value=0.21 Score=42.12 Aligned_cols=117 Identities=14% Similarity=0.097 Sum_probs=70.0
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCCh-HHHHHHhhcccchhhhhHhhhccCC-C-cc
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLP-QIARQMKRLELSSIWALLAAFEDLL-P-LG 77 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p-~la~~~~~~~~~pCWalMlaf~~pl-~-~~ 77 (143)
|++++++|.+. .+|+.+ .+|.||+|+| ..++.+|+..-..| ...+.+.++.+.++-.+.+.|+++. + .+
T Consensus 238 i~~~~~~v~v~~~~g~~~-~ad~VI~a~p------~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~ 310 (520)
T 1s3e_A 238 IDQTRENVLVETLNHEMY-EAKYVISAIP------PTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKD 310 (520)
T ss_dssp EECSSSSEEEEETTSCEE-EESEEEECSC------GGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGGT
T ss_pred EEECCCeEEEEECCCeEE-EeCEEEECCC------HHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCCC
Confidence 44566789887 666443 5799999999 55777776311123 4456667778888877888888763 1 00
Q ss_pred ----c-------cC----CCCCCCC-CceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCC
Q 037580 78 ----T-------KL----LSSQSDA-PHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGL 132 (143)
Q Consensus 78 ----~-------~~----~~sgr~~-~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~ 132 (143)
. .+ +++..++ ....+.......++... +.+.+++.+.+++.+++++|.
T Consensus 311 ~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~-------~~~~~e~~~~vl~~L~~~~~~ 374 (520)
T 1s3e_A 311 YCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLA-------RLTKEERLKKLCELYAKVLGS 374 (520)
T ss_dssp EEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHT-------TSCHHHHHHHHHHHHHHHHTC
T ss_pred CCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhh-------cCCHHHHHHHHHHHHHHHhCc
Confidence 0 01 1221111 12333333333334333 456788999999999988774
No 11
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.15 E-value=0.97 Score=37.51 Aligned_cols=117 Identities=9% Similarity=0.045 Sum_probs=68.7
Q ss_pred CcccCCceEEe-cCCCCc---CCCcEEEEccCCCCCCChhHHHHhh-CcCCChHHHHHHhhcccchhhhhHhhhccCC-C
Q 037580 2 LEPFNGMWHLS-LNGKPR---GQFDVVIVAHNVPSCNDRKCANQLL-GSSGLPQIARQMKRLELSSIWALLAAFEDLL-P 75 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~---g~FD~VVva~P~p~~~~~~qA~~Ll-~~~~~p~la~~~~~~~~~pCWalMlaf~~pl-~ 75 (143)
|.+++++|.+. .+|+.. -.+|.||+|+| ......++ .....+...+.+..+.+.+.-.+.+.|+++. .
T Consensus 264 I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p------~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~ 337 (498)
T 2iid_A 264 IQQNDQKVTVVYETLSKETPSVTADYVIVCTT------SRAVRLIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWE 337 (498)
T ss_dssp EEECSSCEEEEEECSSSCCCEEEESEEEECSC------HHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred EEECCCeEEEEEecCCcccceEEeCEEEECCC------hHHHhheecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCCcc
Confidence 45567789886 555432 25899999999 55666653 2211335567778888888888899998762 1
Q ss_pred c-----c-----cc-C---CCC-C-CCCCceEEEEe--CchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 76 L-----G-----TK-L---LSS-Q-SDAPHCWTSST--LQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 76 ~-----~-----~~-~---~~s-g-r~~~e~WvlhA--t~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
. . .. + .++ . .++ .-+|.+ ..+.++.-. ..+.+++.+.+++.+++++|++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~s~~~p~g--~~~L~~~~~g~~a~~~~-------~~~~~~~~~~~l~~L~~~~g~~ 404 (498)
T 2iid_A 338 DDGIHGGKSTTDLPSRFIYYPNHNFTNG--VGVIIAYGIGDDANFFQ-------ALDFKDCADIVFNDLSLIHQLP 404 (498)
T ss_dssp GGTCCSSEEEESSTTCEEECCSSCCTTS--CEEEEEEEEHHHHHTTT-------TSCHHHHHHHHHHHHHHHHTCC
T ss_pred CCCccCCcccCCCCcceEEECCCCCCCC--CcEEEEEeCCccHhhhh-------cCCHHHHHHHHHHHHHHHcCCC
Confidence 0 0 00 0 111 1 111 233433 222222211 3467788889999998888753
No 12
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.52 E-value=0.055 Score=45.05 Aligned_cols=116 Identities=9% Similarity=0.003 Sum_probs=72.6
Q ss_pred CcccCCceEEe-cCCC--CcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccCC----
Q 037580 2 LEPFNGMWHLS-LNGK--PRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDLL---- 74 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~--~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~pl---- 74 (143)
|++.+++|.+. .+|. ..-.||.||+|+| ..+...|+.. ..+...+.+.++.+.++..+.+.|+++.
T Consensus 263 i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p------~~~l~~l~~~-l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~ 335 (489)
T 2jae_A 263 MKNVSEGVTVEYTAGGSKKSITADYAICTIP------PHLVGRLQNN-LPGDVLTALKAAKPSSSGKLGIEYSRRWWETE 335 (489)
T ss_dssp EEEETTEEEEEEEETTEEEEEEESEEEECSC------HHHHTTSEEC-CCHHHHHHHHTEECCCEEEEEEEESSCHHHHT
T ss_pred EEEcCCeEEEEEecCCeEEEEECCEEEECCC------HHHHHhCccC-CCHHHHHHHHhCCCccceEEEEEeCCCCccCC
Confidence 45667789886 4442 2345899999999 5577777642 1346677888889999999999998752
Q ss_pred -Cc-c------ccC----CCC-CCCCCceEEEE---eCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCC
Q 037580 75 -PL-G------TKL----LSS-QSDAPHCWTSS---TLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGL 132 (143)
Q Consensus 75 -~~-~------~~~----~~s-gr~~~e~Wvlh---At~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~ 132 (143)
.. + ... .+| .-.... .++. ....+.+... +.+.+++.+.+++.++++++.
T Consensus 336 ~~~~g~~~~~~~~~~~~~~~s~~~~~~~-~~l~~~~~~g~~~~~~~-------~~~~~~~~~~~l~~L~~~~~~ 401 (489)
T 2jae_A 336 DRIYGGASNTDKDISQIMFPYDHYNSDR-GVVVAYYSSGKRQEAFE-------SLTHRQRLAKAIAEGSEIHGE 401 (489)
T ss_dssp TCCCSCEEEESSTTCEEECCSSSTTSSC-EEEEEEEEETHHHHHHH-------TSCHHHHHHHHHHHHHHHHCG
T ss_pred CCcccccccCCCCceEEEeCCCCCCCCC-CEEEEEeeCCchhhhhh-------cCCHHHHHHHHHHHHHHHcCc
Confidence 11 0 011 122 111112 2332 2344554443 346788999999999988864
No 13
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=90.22 E-value=0.16 Score=41.43 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=46.8
Q ss_pred CcccCCceEEecCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCC-hHHHHHHhhcccchhhhhHhhhccC
Q 037580 2 LEPFNGMWHLSLNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGL-PQIARQMKRLELSSIWALLAAFEDL 73 (143)
Q Consensus 2 l~~~~~~W~L~~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~-p~la~~~~~~~~~pCWalMlaf~~p 73 (143)
|.+++++| +..+|+. -.+|.||+|++ ...+.+||+.... +.+.+.+.+++..++..+.++|+.+
T Consensus 215 i~~~~~~v-V~~~g~~-~~ad~Vv~a~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 279 (421)
T 3nrn_A 215 INIEEKKV-YTRDNEE-YSFDVAISNVG------VRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGE 279 (421)
T ss_dssp EETTTTEE-EETTCCE-EECSEEEECSC------HHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESS
T ss_pred EEEECCEE-EEeCCcE-EEeCEEEECCC------HHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCC
Confidence 44566788 7655533 34799999999 6689999972112 3566777888888999999999886
No 14
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=84.10 E-value=3.5 Score=37.52 Aligned_cols=117 Identities=8% Similarity=-0.041 Sum_probs=67.9
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHh---hCcCCChHHHHHHhhcccchhhhhHhhhccCC-C-
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQL---LGSSGLPQIARQMKRLELSSIWALLAAFEDLL-P- 75 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~L---l~~~~~p~la~~~~~~~~~pCWalMlaf~~pl-~- 75 (143)
|++++++|.+. .+|+. -.+|.||+|+| ....... +.....+...+.+..+.+.+.--+.+.|++|. .
T Consensus 555 I~~~~~~v~V~~~~G~~-i~Ad~VIvA~P------~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~ 627 (776)
T 4gut_A 555 IDYSGDEVQVTTTDGTG-YSAQKVLVTVP------LALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDS 627 (776)
T ss_dssp EECSSSSEEEEETTCCE-EEESEEEECCC------HHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHH
T ss_pred EEEcCCEEEEEECCCcE-EEcCEEEECCC------HHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccc
Confidence 45667789987 66643 34799999999 4455431 11111234556777777777778888898762 1
Q ss_pred ----cc----ccC------------CCCCCCCCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCC
Q 037580 76 ----LG----TKL------------LSSQSDAPHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGL 132 (143)
Q Consensus 76 ----~~----~~~------------~~sgr~~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~ 132 (143)
.. ... +.+...+.-..+.....+.++.-. +.+.+++.+..++.|.+++|.
T Consensus 628 ~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~-------~lsdeel~~~~l~~L~~ifg~ 697 (776)
T 4gut_A 628 KVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVR-------TLDDKQVLQQCMATLRELFKE 697 (776)
T ss_dssp HHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHH-------TSCHHHHHHHHHHHHHHHTTT
T ss_pred cCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHH-------cCCHHHHHHHHHHHHHHHhCc
Confidence 00 000 111000111222233344444432 457789999999999999885
No 15
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=83.90 E-value=0.43 Score=39.63 Aligned_cols=116 Identities=11% Similarity=0.115 Sum_probs=68.9
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhC---cCCChHHHHHHhhcccchhhhhHhhhccCC-Cc
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLG---SSGLPQIARQMKRLELSSIWALLAAFEDLL-PL 76 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~---~~~~p~la~~~~~~~~~pCWalMlaf~~pl-~~ 76 (143)
|.+.+++|.+. .+|+.+ .+|.||+|+| ..++..++. ....+...+.+..+.+.++--+.+.|++|. +.
T Consensus 240 i~~~~~~v~v~~~~g~~~-~ad~vI~a~~------~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~ 312 (472)
T 1b37_A 240 IKYSPGGVTVKTEDNSVY-SADYVMVSAS------LGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPE 312 (472)
T ss_dssp EEECSSCEEEEETTSCEE-EESEEEECSC------HHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCC
T ss_pred EEEcCCcEEEEECCCCEE-EcCEEEEecC------HHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCC
Confidence 34556778887 666443 4799999999 667777652 111223456677777888888889998863 11
Q ss_pred --c------c--c---------CCCCCCCCCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHh-CC
Q 037580 77 --G------T--K---------LLSSQSDAPHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAAL-GL 132 (143)
Q Consensus 77 --~------~--~---------~~~sgr~~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~-g~ 132 (143)
. . . .+++ ..+....++....+.++... +.+.+++.+.+++.+++++ |.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~l~~~~~~~~a~~~~-------~~~~~e~~~~~l~~L~~~~Pg~ 380 (472)
T 1b37_A 313 GKGREFFLYASSRRGYYGVWQEFEKQ-YPDANVLLVTVTDEESRRIE-------QQSDEQTKAEIMQVLRKMFPGK 380 (472)
T ss_dssp STTCSEEEECCSSTTSSCEEEECTTT-STTCCEEEEEEEHHHHHHHH-------TSCHHHHHHHHHHHHHHHCTTS
T ss_pred CCCcceEEecccCCccceeeecccCC-CCCCCEEEEEechHHHHHHH-------hCCHHHHHHHHHHHHHHHcCCC
Confidence 0 0 0 0000 01222333333333333222 3468899999999999988 64
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=82.25 E-value=0.43 Score=39.63 Aligned_cols=66 Identities=11% Similarity=-0.011 Sum_probs=45.7
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCCh-HHHHHHhhcccchhhhhHhhhccCC
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLP-QIARQMKRLELSSIWALLAAFEDLL 74 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p-~la~~~~~~~~~pCWalMlaf~~pl 74 (143)
|++.+++|.+. .+|+. -.+|.||+|+| ..++.+|+-.-..| ...+.+..+.+.++..+.+.|+++.
T Consensus 282 i~~~~~~v~v~~~~g~~-~~ad~vI~a~~------~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 282 VVNERDAARVTARDGRE-FVAKRVVCTIP------LNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEECSSSEEEEETTCCE-EEEEEEEECCC------GGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEcCCEEEEEECCCCE-EEcCEEEECCC------HHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 34556678886 55533 35799999999 44777775211123 4556777788889999999998864
No 17
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=72.99 E-value=2.8 Score=34.41 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=40.1
Q ss_pred cCCceEEecCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccchhhhhHhhhccC
Q 037580 5 FNGMWHLSLNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSSIWALLAAFEDL 73 (143)
Q Consensus 5 ~~~~W~L~~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~pCWalMlaf~~p 73 (143)
+++.+.+ .+|+. -.+|.||+|+| .....++|. .+.+......++..+.-++.++|+..
T Consensus 251 ~~~~v~~-~~G~~-~~ad~vI~t~P------~~~l~~~l~---~~~~~~~~~~l~y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 251 NNKTVTL-QDGTT-IGYKKLVSTMA------VDFLAEAMN---DQELVGLTKQLFYSSTHVIGVGVRGS 308 (513)
T ss_dssp TTTEEEE-TTSCE-EEEEEEEECSC------HHHHHHHTT---CHHHHHHHTTCCEEEEEEEEEEEESS
T ss_pred cCCEEEE-cCCCE-EECCEEEECCC------HHHHHHhcC---chhhHhhhhcccCCceEEEEEEEecc
Confidence 3444433 44533 35799999999 668888886 34666677778888888888887654
No 18
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=71.60 E-value=2.2 Score=34.41 Aligned_cols=51 Identities=8% Similarity=0.032 Sum_probs=34.6
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhhCcCCChHHHHHHhhcccch
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLLGSSGLPQIARQMKRLELSS 62 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~~~p~la~~~~~~~~~p 62 (143)
|++++++|.+. .+|+ -.+|.||+|+| +.++.+++.. .+...+.+.++.+.+
T Consensus 229 i~~~~~~v~v~~~~g~--~~ad~Vv~a~~------~~~~~~~l~~--~~~~~~~~~~~~~~~ 280 (424)
T 2b9w_A 229 ITREDGKVHIHTTDWD--RESDVLVLTVP------LEKFLDYSDA--DDDEREYFSKIIHQQ 280 (424)
T ss_dssp EECCTTCEEEEESSCE--EEESEEEECSC------HHHHTTSBCC--CHHHHHHHTTCEEEE
T ss_pred EEEECCEEEEEECCCe--EEcCEEEECCC------HHHHhhccCC--CHHHHHHHhcCCcce
Confidence 44566788886 5553 35899999999 6688888753 354445556665555
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=63.84 E-value=1.9 Score=36.23 Aligned_cols=60 Identities=15% Similarity=0.217 Sum_probs=40.8
Q ss_pred CCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHH-------------hhCcCCChHHHHHHhhcccchhhhhHhhhc
Q 037580 6 NGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQ-------------LLGSSGLPQIARQMKRLELSSIWALLAAFE 71 (143)
Q Consensus 6 ~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~-------------Ll~~~~~p~la~~~~~~~~~pCWalMlaf~ 71 (143)
++++.+. .+|+.+ .+|.||+|+| ...... +.+. ..+...+.+.++.+.+.--+.+.|+
T Consensus 231 ~~~v~v~~~~g~~~-~ad~VI~t~p------~~~l~~~~~~~~~~~~~i~f~P~-Lp~~~~~ai~~~~~~~~~Kv~l~f~ 302 (516)
T 1rsg_A 231 SKNVTVNCEDGTVY-NADYVIITVP------QSVLNLSVQPEKNLRGRIEFQPP-LKPVIQDAFDKIHFGALGKVIFEFE 302 (516)
T ss_dssp TSCEEEEETTSCEE-EEEEEEECCC------HHHHHGGGSSCSCSTTCCEEESC-CCHHHHHHTTSSCCCCCEEEEEEES
T ss_pred CCeEEEEECCCcEE-ECCEEEECCC------HHHhhhccccccccccceEecCC-CCHHHHHHHHhCCCCcceEEEEEeC
Confidence 5578887 666433 4899999999 444432 2222 1234567778888888888899998
Q ss_pred cC
Q 037580 72 DL 73 (143)
Q Consensus 72 ~p 73 (143)
++
T Consensus 303 ~~ 304 (516)
T 1rsg_A 303 EC 304 (516)
T ss_dssp SC
T ss_pred CC
Confidence 86
No 20
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=62.11 E-value=1.5 Score=36.31 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=61.6
Q ss_pred eEEe-c--CCC--CcCCCcEEEEccCCCCCCChhHHHHhhCcC-CChHHHHHHhhcccchhhhhHhhhccCC-Ccc----
Q 037580 9 WHLS-L--NGK--PRGQFDVVIVAHNVPSCNDRKCANQLLGSS-GLPQIARQMKRLELSSIWALLAAFEDLL-PLG---- 77 (143)
Q Consensus 9 W~L~-~--~g~--~~g~FD~VVva~P~p~~~~~~qA~~Ll~~~-~~p~la~~~~~~~~~pCWalMlaf~~pl-~~~---- 77 (143)
|.+. . +|+ ..-.+|.||+|+| ...+.+|+... ..+.-...+..+.+.++-.+.+.|+.+. +.+
T Consensus 280 ~~v~~~~~~g~~~~~~~ad~VI~a~p------~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~ 353 (504)
T 1sez_A 280 WSIISASPHKRQSEEESFDAVIMTAP------LCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEGF 353 (504)
T ss_dssp EEEEEBCSSSSCBCCCEESEEEECSC------HHHHHTSEEESSSSBCCCTTSCCCCEEEEEEEEEEEEGGGBSSCCCSS
T ss_pred EEEEEcCCCCccceeEECCEEEECCC------HHHHHHHhhcccCCcccHHHHhcCCCCceEEEEEEEchhhcCCCCCce
Confidence 8886 2 342 1235899999999 66888888210 0111011245566778888888887752 110
Q ss_pred ---cc---------C-----CCC---CCCCCceEEEEe--CchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 78 ---TK---------L-----LSS---QSDAPHCWTSST--LQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 78 ---~~---------~-----~~s---gr~~~e~WvlhA--t~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
.. . .+. .+......++.+ ...+..... +.+.|++.+..++.+++++|..
T Consensus 354 ~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~-------~~~~ee~~~~v~~~L~~~~g~~ 424 (504)
T 1sez_A 354 GVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELA-------KASRTELKEIVTSDLKQLLGAE 424 (504)
T ss_dssp EEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGT-------TCCHHHHHHHHHHHHHHHHCBC
T ss_pred EEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCCCCccccc-------CCCHHHHHHHHHHHHHHHhCCC
Confidence 00 0 000 111112344332 222222222 4577899999999999998863
No 21
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=58.90 E-value=6.7 Score=25.82 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=22.8
Q ss_pred cccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 112 TATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 112 e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
-+-+.+.++.+.+.|++++|.+++++
T Consensus 15 ~EQKralaeE~T~if~evLGcpPgsV 40 (72)
T 3mb2_B 15 RTRKQAFAAEASAIFQRVIGTPPGRL 40 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcE
Confidence 44577899999999999999999987
No 22
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=38.62 E-value=6.6 Score=34.48 Aligned_cols=118 Identities=9% Similarity=0.044 Sum_probs=66.5
Q ss_pred CcccCCceEEe-cCC-----CCcCCCcEEEEccCCCCCCChhHHHHhh-----CcCCCh-HHHHHHhhcccchhhhhHhh
Q 037580 2 LEPFNGMWHLS-LNG-----KPRGQFDVVIVAHNVPSCNDRKCANQLL-----GSSGLP-QIARQMKRLELSSIWALLAA 69 (143)
Q Consensus 2 l~~~~~~W~L~-~~g-----~~~g~FD~VVva~P~p~~~~~~qA~~Ll-----~~~~~p-~la~~~~~~~~~pCWalMla 69 (143)
|.+.++++.+. .++ ...-.+|.||+|+| .....++. ... .| ...+.+..+.|.+.=-+.+.
T Consensus 422 I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP------~~vL~~l~~~i~f~P~-LP~~k~~Ai~~l~~g~~~KV~l~ 494 (662)
T 2z3y_A 422 VRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP------LGVLKQQPPAVQFVPP-LPEWKTSAVQRMGFGNLNKVVLC 494 (662)
T ss_dssp EEEETTEEEEEEEESSCTTCEEEEEESEEEECCC------HHHHHCSSCSSEEESC-CCHHHHHHHHHSEECCCEEEEEE
T ss_pred EEECCCcEEEEEeecccCCCCeEEEeCEEEECCC------HHHHhcccCceEEcCC-CCHHHHHHHHhCCccceeEEEEE
Confidence 45566778886 331 11224799999999 55665531 111 33 34556778888888889999
Q ss_pred hccCC-Cc--cc--cCCC--CCCC---------CCceEEEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 70 FEDLL-PL--GT--KLLS--SQSD---------APHCWTSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 70 f~~pl-~~--~~--~~~~--sgr~---------~~e~WvlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
|++|. +. .. -+.+ +.|. +.-..+.--...+++.-. ..+.+++.+..++.+.+++|..
T Consensus 495 f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~-------~lsdee~~~~~l~~L~~~~g~~ 567 (662)
T 2z3y_A 495 FDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIME-------NISDDVIVGRCLAILKGIFGSS 567 (662)
T ss_dssp CSSCCSCTTCSEEEECCSSSTTTTEEEEEECCSSSSEEEEEECTHHHHHHT-------TSCHHHHHHHHHHHHHHHHCTT
T ss_pred cCcccccCCCCceeeecCCCCCCCceeEEEeCCCCCEEEEEeccHhHHHHH-------hCCHHHHHHHHHHHHHHHhCCc
Confidence 98873 21 00 0001 0111 001112222334444332 4577889999999999988753
No 23
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=38.16 E-value=24 Score=20.34 Aligned_cols=26 Identities=12% Similarity=0.288 Sum_probs=21.0
Q ss_pred cccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 112 TATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 112 e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
.+...++.+.+.+++.+.+|.+...+
T Consensus 16 ~e~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 16 DEQLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 45578899999999999999876543
No 24
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=35.81 E-value=16 Score=29.17 Aligned_cols=66 Identities=14% Similarity=0.130 Sum_probs=40.0
Q ss_pred CcccCCceEEe-cCCCCcCCCcEEEEccCCCCCCChhHHHHhh-CcCCCh-HHHHHHhhcccchhhhhHhhhccCCC
Q 037580 2 LEPFNGMWHLS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQLL-GSSGLP-QIARQMKRLELSSIWALLAAFEDLLP 75 (143)
Q Consensus 2 l~~~~~~W~L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~Ll-~~~~~p-~la~~~~~~~~~pCWalMlaf~~pl~ 75 (143)
|+++++++.+. .+|+. -.+|.||+|+|.+ ....+. ... .| ...+.+....+...--+.+.|+++.+
T Consensus 229 i~~~~~~v~v~~~~g~~-~~ad~vi~a~~~~------~l~~i~~~p~-l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 229 IDQSGDVVNVTVKDGHA-FQAHSVIVATPMN------TWRRIVFTPA-LPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp EECSSSSEEEEETTSCC-EEEEEEEECSCGG------GGGGSEEESC-CCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred EEEcCCeEEEEECCCCE-EEeCEEEEecCcc------hHhheeeCCC-CCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 34566778886 56643 3579999999944 666553 111 23 23344555556666667777777653
No 25
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=34.14 E-value=46 Score=19.78 Aligned_cols=27 Identities=7% Similarity=0.170 Sum_probs=22.6
Q ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 111 PTATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 111 ~e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
+.+.+.++++.+.+++.+.+|++..++
T Consensus 11 t~eqK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 11 DVGKKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceE
Confidence 356788999999999999999987665
No 26
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=31.77 E-value=35 Score=19.77 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=21.3
Q ss_pred cccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 112 TATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 112 e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
++.+.++.+.+.+++.+.+|++..++
T Consensus 13 ~e~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 13 DEQKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 56678899999999999999886543
No 27
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=31.38 E-value=35 Score=20.39 Aligned_cols=27 Identities=11% Similarity=0.278 Sum_probs=22.1
Q ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 111 PTATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 111 ~e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
+++.+.++.+.+.+++.+.+|.+..++
T Consensus 12 s~eqk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 12 SPQEVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 356788999999999999999886554
No 28
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.41 E-value=38 Score=19.56 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=21.2
Q ss_pred cccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 112 TATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 112 e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
.+.+.++.+.+.+.+.+.+|++..++
T Consensus 13 ~eqk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 13 DEQKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcCeE
Confidence 55678899999999999999876543
No 29
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=28.92 E-value=35 Score=21.26 Aligned_cols=28 Identities=11% Similarity=0.146 Sum_probs=22.7
Q ss_pred CCcccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 110 IPTATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 110 ~~e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
++.+...++.+.+.+++.+.+|++..++
T Consensus 12 ls~eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 12 LDEQQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCCceE
Confidence 3466778999999999999999886554
No 30
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=28.90 E-value=31 Score=21.20 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=21.6
Q ss_pred CcccHHHHHHHHHHHHHHHhCCCCCC
Q 037580 111 PTATAEKVKTGMLEGVEAALGLPKSS 136 (143)
Q Consensus 111 ~e~~~e~V~~~Ll~af~~~~g~~~~~ 136 (143)
+++.+.++.+.+.+++.+.+|++..+
T Consensus 13 s~eqK~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 13 STEQKAELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 45678899999999999999988644
No 31
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=28.83 E-value=30 Score=20.25 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=20.2
Q ss_pred cccHHHHHHHHHHHHHHHhCCCCCC
Q 037580 112 TATAEKVKTGMLEGVEAALGLPKSS 136 (143)
Q Consensus 112 e~~~e~V~~~Ll~af~~~~g~~~~~ 136 (143)
++.++++.+.|.+.+.+.+|.+...
T Consensus 14 ~eqk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 14 PEKKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc
Confidence 4557889999999999999987543
No 32
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=28.14 E-value=13 Score=34.32 Aligned_cols=118 Identities=10% Similarity=0.074 Sum_probs=66.4
Q ss_pred CcccCCceEEe-cC---C--CCcCCCcEEEEccCCCCCCChhHHHHhh-----CcCCCh-HHHHHHhhcccchhhhhHhh
Q 037580 2 LEPFNGMWHLS-LN---G--KPRGQFDVVIVAHNVPSCNDRKCANQLL-----GSSGLP-QIARQMKRLELSSIWALLAA 69 (143)
Q Consensus 2 l~~~~~~W~L~-~~---g--~~~g~FD~VVva~P~p~~~~~~qA~~Ll-----~~~~~p-~la~~~~~~~~~pCWalMla 69 (143)
|.+.++++.+. .+ + ...=.+|.||+|+| .....+++ ... .| ...+.+..+.|.++=-+.+.
T Consensus 593 I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvP------l~vLk~l~~~I~F~P~-LP~~k~~AI~~l~~g~v~KV~L~ 665 (852)
T 2xag_A 593 VRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP------LGVLKQQPPAVQFVPP-LPEWKTSAVQRMGFGNLNKVVLC 665 (852)
T ss_dssp EEEETTEEEEEEEESSSTTCEEEEEESEEEECCC------HHHHHCSSCSSEEESC-CCHHHHHHHHHSEECCCEEEEEE
T ss_pred EEEcCCcEEEEEeecccCCCCeEEECCEEEECCC------HHHHHhhhcccccCCC-CCHHHHHHHHcCCccceEEEEEE
Confidence 44566778886 32 1 11124799999999 55666532 111 23 34456778888888888999
Q ss_pred hccCC-Cc--cc--cCCC--CCCCC-CceE--------EEEeCchHHHhcCCCCCCCCcccHHHHHHHHHHHHHHHhCCC
Q 037580 70 FEDLL-PL--GT--KLLS--SQSDA-PHCW--------TSSTLQLYGKRNKIPQEIIPTATAEKVKTGMLEGVEAALGLP 133 (143)
Q Consensus 70 f~~pl-~~--~~--~~~~--sgr~~-~e~W--------vlhAt~~wS~~hl~pqe~~~e~~~e~V~~~Ll~af~~~~g~~ 133 (143)
|+++. +. .. -+.+ +.|.. ...| +..-...+++.-. ..+.+++.+..++.|.+++|..
T Consensus 666 F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~~~pvLl~~v~G~~a~~l~-------~lsdeel~~~~l~~L~~ifG~~ 738 (852)
T 2xag_A 666 FDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIME-------NISDDVIVGRCLAILKGIFGSS 738 (852)
T ss_dssp CSSCCSCTTCCEEEECCSSSTTTTTTCEEEECSSSSEEEEEECHHHHHHGG-------GSCHHHHHHHHHHHHHHHHCTT
T ss_pred cCCcccCCCCCeeeeeccccCCCCceEEEecCCCCCEEEEEecCcCHHHHh-------cCCHHHHHHHHHHHHHHHhCcc
Confidence 98873 21 00 0000 11211 1112 2222333444322 4577889999999999988753
No 33
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=23.92 E-value=51 Score=19.79 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=21.7
Q ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCC
Q 037580 111 PTATAEKVKTGMLEGVEAALGLPKSSL 137 (143)
Q Consensus 111 ~e~~~e~V~~~Ll~af~~~~g~~~~~~ 137 (143)
+.+.+.++.+.+.+++.+.+|++..++
T Consensus 15 s~eqK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 15 TNEQKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHHHCcCcccE
Confidence 456678999999999999999875543
No 34
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=22.72 E-value=18 Score=29.67 Aligned_cols=66 Identities=14% Similarity=0.182 Sum_probs=26.9
Q ss_pred CcccCCceE-Ee-cCCCCcCCCcEEEEccCCCCCCChhHHHH-hhCcCCCh-HHHHHHhhcccc-hhhhhHhhhccCC
Q 037580 2 LEPFNGMWH-LS-LNGKPRGQFDVVIVAHNVPSCNDRKCANQ-LLGSSGLP-QIARQMKRLELS-SIWALLAAFEDLL 74 (143)
Q Consensus 2 l~~~~~~W~-L~-~~g~~~g~FD~VVva~P~p~~~~~~qA~~-Ll~~~~~p-~la~~~~~~~~~-pCWalMlaf~~pl 74 (143)
|..+++++. +. .+|+.+ .+|.||++++++ .+.+ |++....+ ...+.+...++. +++.+.++++.+.
T Consensus 247 I~~~~~~~~gV~~~~g~~~-~ad~VV~~a~~~------~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 317 (501)
T 4dgk_A 247 METTGNKIEAVHLEDGRRF-LTQAVASNADVV------HTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHH 317 (501)
T ss_dssp EEEETTEEEEEEETTSCEE-ECSCEEECCC---------------------------------CCEEEEEEEEESSCC
T ss_pred EEeeCCeEEEEEecCCcEE-EcCEEEECCCHH------HHHHHhccccccchhhhhhhhccccCCceeEEEecccCCc
Confidence 445667776 44 666554 359999998843 6654 44421111 223334444433 5666667776643
Done!