Query 037584
Match_columns 114
No_of_seqs 117 out of 998
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 03:16:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ima_B Cysteine proteinase inh 100.0 5.5E-31 1.9E-35 167.5 11.8 89 26-114 1-91 (91)
2 1eqk_A Oryzacystatin-I; alpha 100.0 4.8E-29 1.6E-33 161.3 13.7 91 24-114 5-96 (102)
3 3ul5_A Canecystatin-1; defense 100.0 3.2E-29 1.1E-33 170.0 13.0 91 24-114 42-136 (139)
4 2w9q_A Multicystatin; protease 100.0 7.6E-28 2.6E-32 151.5 12.6 85 30-114 1-87 (87)
5 2l4v_A Cystatin; protease inhi 100.0 8E-28 2.7E-32 162.7 12.2 90 24-114 39-132 (135)
6 2kxg_A Aspartic protease inhib 99.9 5.7E-27 1.9E-31 150.0 11.7 84 25-114 3-94 (95)
7 2o9u_X Monellin chain B and mo 99.9 7.7E-26 2.6E-30 144.4 7.6 80 28-114 1-93 (97)
8 1yvb_I Cystatin; cysteine prot 99.9 6.7E-25 2.3E-29 143.1 12.0 86 26-112 1-109 (111)
9 1roa_A Cystatin D; inhibitor o 99.9 1.7E-24 5.9E-29 143.6 12.7 87 25-112 7-118 (122)
10 3mwz_A Sialostatin L2; antipar 99.9 4.2E-24 1.4E-28 140.5 12.7 87 25-112 3-111 (115)
11 3gax_A Cystatin-C; cysteine pr 99.9 3.4E-24 1.1E-28 142.0 12.1 89 23-112 5-116 (120)
12 2ch9_A Cystatin F; inhibitor, 99.9 1.6E-23 5.6E-28 140.8 13.4 88 24-112 13-124 (131)
13 3l0r_A Cystatin-2, OMC2; SOFT 99.9 6.6E-24 2.3E-28 139.9 11.2 84 26-112 2-107 (115)
14 1cyu_A Cystatin A, stefin A; p 99.9 6.8E-24 2.3E-28 136.1 3.9 84 26-113 1-87 (98)
15 2oct_A Cystatin B; stefin, amy 99.9 9.3E-23 3.2E-27 131.1 9.2 84 26-113 1-87 (98)
16 2bo9_B Human latexin, MUM; met 96.6 0.085 2.9E-06 37.6 12.3 67 36-102 4-78 (222)
17 1kwi_A Protegrin-3 precursor; 92.1 0.7 2.4E-05 29.1 6.5 62 40-102 3-86 (101)
18 2ux9_A Dodecin; flavoprotein; 83.7 4.7 0.00016 23.5 6.9 48 38-86 14-63 (69)
19 3onr_A Protein transport prote 83.5 4.5 0.00015 23.8 5.8 48 38-86 14-63 (72)
20 2vxa_A Dodecin; flavoprotein, 83.5 5 0.00017 23.6 6.9 48 38-86 15-64 (72)
21 2yiz_A Dodecin; flavoprotein, 83.2 5 0.00017 23.4 7.0 48 38-86 14-63 (69)
22 2cc6_A VNG1446H, dodecin; flav 82.3 4.7 0.00016 23.4 5.4 48 38-86 12-61 (68)
23 3brd_D Protein LIN-12; protein 44.1 5.4 0.00018 19.1 0.2 17 89-105 7-24 (29)
24 3bx4_B Aggretin beta chain; to 31.2 13 0.00044 23.2 0.5 9 25-33 23-31 (146)
No 1
>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0
Probab=99.97 E-value=5.5e-31 Score=167.46 Aligned_cols=89 Identities=38% Similarity=0.537 Sum_probs=80.5
Q ss_pred cccceeeeCC-CCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEec-C
Q 037584 26 ALVGGWKPIE-DPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWENA-K 103 (114)
Q Consensus 26 ~~~GG~~~i~-~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~p-~ 103 (114)
.++|||+++. +++||+++++++||+.+||+++|+.|.|.+|+++++|||+|+||+|+++++++++.+.|+++||++| +
T Consensus 1 ~~~GG~~~~~~~~~d~~v~~~a~fav~~~n~~~n~~~~~~~Vv~a~~QVVaG~nY~l~v~~~~~~~~~~y~a~V~~~pW~ 80 (91)
T 3ima_B 1 ALMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVEVIEGGKKKVYEAKVWVQAWL 80 (91)
T ss_dssp CCBTCEEC------CHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEEEEEGGG
T ss_pred CCCcccccCcCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCceEEEEEEEEEeeCC
Confidence 3789999953 6899999999999999999999999999999999999999999999999999988899999999999 9
Q ss_pred CceEEEeEEeC
Q 037584 104 QIKKLTSFHRL 114 (114)
Q Consensus 104 ~~~~l~sf~~~ 114 (114)
|+++|+||+|+
T Consensus 81 ~~~~l~~F~~~ 91 (91)
T 3ima_B 81 NSKKLHEFSPI 91 (91)
T ss_dssp TEEEEEEEEC-
T ss_pred CcEEEEEEEeC
Confidence 99999999985
No 2
>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2
Probab=99.96 E-value=4.8e-29 Score=161.29 Aligned_cols=91 Identities=33% Similarity=0.641 Sum_probs=85.7
Q ss_pred CccccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEec-
Q 037584 24 DAALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWENA- 102 (114)
Q Consensus 24 ~~~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~p- 102 (114)
..+++|||+++.+++||+++++++||+.+||+++++.|.|.+|+++++|||+|+||+|+++++++++.+.|+++||++|
T Consensus 5 ~~~~~GG~~~~~~~~~~~v~~~a~~Av~~~n~~~n~~~~~~~Vv~a~~QVVaG~~Y~l~v~~~~~~~~~~c~~~V~~~PW 84 (102)
T 1eqk_A 5 GGPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPW 84 (102)
T ss_dssp SCSCSSSSEEECCTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTT
T ss_pred cCCCCcccccCCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCcEEEEEEEEEeeC
Confidence 3568999999645899999999999999999999999999999999999999999999999999998999999999999
Q ss_pred CCceEEEeEEeC
Q 037584 103 KQIKKLTSFHRL 114 (114)
Q Consensus 103 ~~~~~l~sf~~~ 114 (114)
.++++|++|++.
T Consensus 85 ~~~~~l~~f~c~ 96 (102)
T 1eqk_A 85 MDFKELQEFKPV 96 (102)
T ss_dssp TTBCCEEEEECC
T ss_pred CCceEEEEEEcC
Confidence 999999999874
No 3
>3ul5_A Canecystatin-1; defense, hydrolase inhibitor; 2.30A {Saccharum officinarum} PDB: 3ul6_A*
Probab=99.96 E-value=3.2e-29 Score=169.97 Aligned_cols=91 Identities=33% Similarity=0.545 Sum_probs=76.2
Q ss_pred CccccceeeeCC--CCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEee-CCCCceEEEEEEE
Q 037584 24 DAALVGGWKPIE--DPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQD-GTATNKYQAVVWE 100 (114)
Q Consensus 24 ~~~~~GG~~~i~--~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~-~~~~~~~~~~V~~ 100 (114)
...++|||++++ +++||+++++++||+.+||+++|+.|.|.+|+++++|||||+||+|+|++.+ +++.+.|+++||+
T Consensus 42 ~~~~~GG~~~i~~~~~ndpeVqela~fAV~e~Nkksn~~l~~~kVv~a~sQVVAG~nY~L~V~a~d~~g~~~~y~a~Vwe 121 (139)
T 3ul5_A 42 RVGMVGDVRDAPAGHENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLYEAKVWE 121 (139)
T ss_dssp --------------CTTCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEEEEECSSCCEEEEEEEEEE
T ss_pred CCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhCCCceeEEEEEEEEEEEecCEEEEEEEEEecCCCCeEEEEEEEEE
Confidence 466899999963 6899999999999999999999999999999999999999999999999999 7788999999999
Q ss_pred ec-CCceEEEeEEeC
Q 037584 101 NA-KQIKKLTSFHRL 114 (114)
Q Consensus 101 ~p-~~~~~l~sf~~~ 114 (114)
+| +|+++|+||+|+
T Consensus 122 kPW~n~k~L~sF~p~ 136 (139)
T 3ul5_A 122 KVWENFKQLQSFQPV 136 (139)
T ss_dssp ETTTTEEEEEEEEEC
T ss_pred eeCCCceEEEEEEEc
Confidence 99 999999999985
No 4
>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A
Probab=99.95 E-value=7.6e-28 Score=151.48 Aligned_cols=85 Identities=29% Similarity=0.549 Sum_probs=80.3
Q ss_pred eeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeC-CCCceEEEEEEEec-CCceE
Q 037584 30 GWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDG-TATNKYQAVVWENA-KQIKK 107 (114)
Q Consensus 30 G~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~-~~~~~~~~~V~~~p-~~~~~ 107 (114)
||+++.|++||+++++++||+.+||+++++.+.+.+|+++++|||||+||+|+++++++ ++.+.|+++||++| .++++
T Consensus 1 G~~~~~~~~d~~v~~~~~fAv~~~n~~~n~~~~~~~vv~a~~QVVaG~~Y~l~v~~~~~~~~~~~c~~~V~~~PW~~~~~ 80 (87)
T 2w9q_A 1 GIVNVPNPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKK 80 (87)
T ss_dssp CCEECSSTTSHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTTEEEEEEEEEEEEGGGTEEE
T ss_pred CcccCCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCCeEEEEEEEEEeeCCCceE
Confidence 79997679999999999999999999999999999999999999999999999999995 56778999999999 99999
Q ss_pred EEeEEeC
Q 037584 108 LTSFHRL 114 (114)
Q Consensus 108 l~sf~~~ 114 (114)
|++|+|+
T Consensus 81 l~~f~~~ 87 (87)
T 2w9q_A 81 VVEFKLV 87 (87)
T ss_dssp EEEEEEC
T ss_pred EEeeccC
Confidence 9999986
No 5
>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus}
Probab=99.95 E-value=8e-28 Score=162.73 Aligned_cols=90 Identities=32% Similarity=0.490 Sum_probs=85.7
Q ss_pred CccccceeeeCCC---CCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEE
Q 037584 24 DAALVGGWKPIED---PNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWE 100 (114)
Q Consensus 24 ~~~~~GG~~~i~~---~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~ 100 (114)
..+++|||+++ + ++|++++++++||+.+||+++|+.|.|.+|+++++|||+|+||+|+++++++++.+.|+++||.
T Consensus 39 ~~~~~GG~~~i-~~~~~nd~evqe~a~fAv~e~N~~sn~~~~f~kVv~a~~QVVAG~nY~l~vev~~~~~~~~c~a~Vw~ 117 (135)
T 2l4v_A 39 EHPIMGGIYDA-PLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEVNDAGKKKLYEAKVWE 117 (135)
T ss_dssp CCCCCCCSSCC-CCTTTTSHHHHHHHHHHHHHHHHHTSCCCEEEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCCCccCcC-CCCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEecCEEEEEEEEEecCCceEEEEEEEEE
Confidence 36689999996 6 8999999999999999999999999999999999999999999999999999888999999999
Q ss_pred ec-CCceEEEeEEeC
Q 037584 101 NA-KQIKKLTSFHRL 114 (114)
Q Consensus 101 ~p-~~~~~l~sf~~~ 114 (114)
+| .|+++|++|+|+
T Consensus 118 kPW~n~~~L~~f~~~ 132 (135)
T 2l4v_A 118 QVWMNFRQLQEFTYL 132 (135)
T ss_dssp CSSSCCEEEEEEEEC
T ss_pred ecCCCceEEEEEEec
Confidence 99 999999999985
No 6
>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima}
Probab=99.95 E-value=5.7e-27 Score=150.00 Aligned_cols=84 Identities=33% Similarity=0.520 Sum_probs=79.3
Q ss_pred ccccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceE-----eEEEEEEEeeC--CCCceEEEE
Q 037584 25 AALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGT-----NYRLVVAAQDG--TATNKYQAV 97 (114)
Q Consensus 25 ~~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~-----nY~l~v~~~~~--~~~~~~~~~ 97 (114)
.+++|||+++ |+|||+++++++||+.+||++ .+.|++|+++ |||+|+ ||+|++++.++ ++.+.|+++
T Consensus 3 ~~~~Gg~~~i-~~nd~~v~e~a~fAv~e~N~~---~l~~~~Vv~a--QVVaG~~~~~~~Y~L~l~~~~~~~~~~~~y~a~ 76 (95)
T 2kxg_A 3 GPAIGEVIGI-SVNDPRVKEIAEFALKQHAEQ---NLILAGVDAG--QIIKGIPHWDNYYNLILSAKHSPHEFSKFYNVV 76 (95)
T ss_dssp CCSSCCCCCC-CTTCHHHHHHHHHHHHHCCTT---CCEEEEEEEE--EEECSSCSSCCEEEEEEEEESCTTSCCEEEEEE
T ss_pred CCCCCcceEC-CCCCHHHHHHHHHHHHHHHhh---CcEEEEEEEE--eEecCccccCccEEEEEEEecCCCCCceEEEEE
Confidence 5689999997 999999999999999999987 6899999999 999999 99999999998 677899999
Q ss_pred EEEec-CCceEEEeEEeC
Q 037584 98 VWENA-KQIKKLTSFHRL 114 (114)
Q Consensus 98 V~~~p-~~~~~l~sf~~~ 114 (114)
||++| +|+++|+||+|+
T Consensus 77 Vw~kpW~n~~~L~sF~~~ 94 (95)
T 2kxg_A 77 VLEKASDNSLKLVAFVPL 94 (95)
T ss_dssp EEEETTTTEEEEEEEEEC
T ss_pred EEEccCCCcEEEEEeEec
Confidence 99999 999999999985
No 7
>2o9u_X Monellin chain B and monellin chain A; alternative conformations, 3-10 polyproline II helix, plant protein; 1.15A {Dioscoreophyllum cumminsii} SCOP: d.17.1.1 PDB: 3pxm_A 1m9g_A 3pyj_A 1fa3_A 1iv7_A 3q2p_A 1iv9_A 1mnl_A 1mol_A 1fuw_A 4mon_B 3mon_B 1krl_B 4mon_A 1krl_A 3mon_A 2q33_B* 2q33_A*
Probab=99.93 E-value=7.7e-26 Score=144.39 Aligned_cols=80 Identities=33% Similarity=0.469 Sum_probs=74.3
Q ss_pred cceeeeCCCCCChHHHHHHHHHHHHHHhhC-CCceEEEEEEEE-----------EEEEeceEeEEEEEEEeeCCCCceEE
Q 037584 28 VGGWKPIEDPNDPHVIEIGQFAVVEYNKQS-KMELKFQSVEKG-----------ETQVVSGTNYRLVVAAQDGTATNKYQ 95 (114)
Q Consensus 28 ~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~-~~~~~~~~V~~a-----------~~QVVaG~nY~l~v~~~~~~~~~~~~ 95 (114)
.|||.+| |+ ||+++++|+||+.+||++. ++.++|.+|+++ ++| |+|+||+|++++.++ .|+
T Consensus 1 ~Ggw~~i-dv-~~~iqela~FAV~e~nk~~~~~~L~f~~Vv~~~~~~~~~~~~~~~Q-VaG~nY~Ltlea~d~----~ye 73 (97)
T 2o9u_X 1 MGEWEII-DI-GPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFRE-IKGYEYQLYVYASDK----LFR 73 (97)
T ss_dssp -CCCEEE-CC-SHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCS-EEEEEEEEEEEETTE----EC-
T ss_pred CCCceEC-CC-CHHHHHHHHHHHHHHhccccCCCcEEEEEEEcccccccccchhhee-eccEEEEEEEEEeCC----ceE
Confidence 4999998 99 9999999999999999986 788999999999 999 999999999999987 899
Q ss_pred EEEEEec-CCceEEEeEEeC
Q 037584 96 AVVWENA-KQIKKLTSFHRL 114 (114)
Q Consensus 96 ~~V~~~p-~~~~~l~sf~~~ 114 (114)
|.||++| +++++|+||++.
T Consensus 74 A~V~ekpw~n~k~L~sF~~~ 93 (97)
T 2o9u_X 74 ADISEDYKTRGRKLLRFNGP 93 (97)
T ss_dssp CEEEEETTTCCEEEEECCCC
T ss_pred EEEEEecCCCcEEeeEccCC
Confidence 9999999 999999999863
No 8
>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A
Probab=99.93 E-value=6.7e-25 Score=143.05 Aligned_cols=86 Identities=30% Similarity=0.344 Sum_probs=79.9
Q ss_pred cccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCce--EEEEEEEEEEEEeceEeEEEEEEEeeCC--------------
Q 037584 26 ALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMEL--KFQSVEKGETQVVSGTNYRLVVAAQDGT-------------- 89 (114)
Q Consensus 26 ~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~--~~~~V~~a~~QVVaG~nY~l~v~~~~~~-------------- 89 (114)
+++|||+++ +++||+++++++||+.+||+++++.+ .+.+|++|++|||+|++|+|+++++++.
T Consensus 1 ~~~Gg~~~~-~~~d~~v~~~~~~av~~~N~~s~~~~~~~l~~v~~a~~QvVaG~~y~l~v~v~~t~C~k~~~~~~~C~~~ 79 (111)
T 1yvb_I 1 RLLGAPVPV-DENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFH 79 (111)
T ss_dssp CCTTCEECC-CTTCHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCCEEEESSSEEEEEEEEEEEBSSCSSSSCSSCCCBC
T ss_pred CCCCCceEC-CCCCHHHHHHHHHHHHHHHHhCCCcceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccCCCC
Confidence 378999996 89999999999999999999999887 8899999999999999999999999974
Q ss_pred ------CCceEEEEEEEec-CCceEEEeEE
Q 037584 90 ------ATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ------~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
+.+.|.++||.+| .++++|++|+
T Consensus 80 ~~~~~~~~~~C~~~V~~~pW~~~~~l~~~~ 109 (111)
T 1yvb_I 80 DEPEMAKYTTCTFVVYSIPWLNQIKLLESK 109 (111)
T ss_dssp SSTTTSCCEEEEEEEEEEGGGTEEEEEEEE
T ss_pred CCcccccccEEEEEEEecCCCCccEeeccc
Confidence 3578999999999 9999999986
No 9
>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A
Probab=99.92 E-value=1.7e-24 Score=143.58 Aligned_cols=87 Identities=28% Similarity=0.296 Sum_probs=77.4
Q ss_pred cc-ccceeeeCCCCCChHHHHHHHHHHHHHHhh-CCCceEE--EEEEEEEEEEeceEeEEEEEEEeeCC-----------
Q 037584 25 AA-LVGGWKPIEDPNDPHVIEIGQFAVVEYNKQ-SKMELKF--QSVEKGETQVVSGTNYRLVVAAQDGT----------- 89 (114)
Q Consensus 25 ~~-~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~-~~~~~~~--~~V~~a~~QVVaG~nY~l~v~~~~~~----------- 89 (114)
.. ++|||+++ +++||+++++++||+.+||++ +++.|.| .+|+++++|||+|+||+|+++++++.
T Consensus 7 ~~~~~Gg~~~~-~~~d~~v~~~a~~Av~~~N~~~s~~~~~~~l~~v~~a~~QVVaG~~Y~l~v~v~~t~C~k~~~~~~~C 85 (122)
T 1roa_A 7 SRTLAGGIHAT-DLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNC 85 (122)
T ss_dssp -----CCEEEE-CTTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSSC
T ss_pred cCcCCCCCeEC-CCCCHHHHHHHHHHHHHHHhcccCCCceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccC
Confidence 55 89999996 899999999999999999999 9998855 99999999999999999999999874
Q ss_pred ---------CCceEEEEEEEec-CCceEEEeEE
Q 037584 90 ---------ATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ---------~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
+.+.|.++||.+| .++++|++|+
T Consensus 86 ~~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~ 118 (122)
T 1roa_A 86 PFNDQPKLKEEEFCSFQINEVPWEDKISILNYK 118 (122)
T ss_dssp CBCCSTTCCCCEEEEEEEEEETTTTEEEEEEEE
T ss_pred CCCCCcccccceEEEEEEEecccCCccEECccc
Confidence 3578999999999 9999999986
No 10
>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A
Probab=99.92 E-value=4.2e-24 Score=140.48 Aligned_cols=87 Identities=31% Similarity=0.511 Sum_probs=77.7
Q ss_pred ccccceeeeCCCC-CChHHHHHHHHHHHHHHhhCC-Cce--EEEEEEEEEEEEeceEeEEEEEEEeeC------------
Q 037584 25 AALVGGWKPIEDP-NDPHVIEIGQFAVVEYNKQSK-MEL--KFQSVEKGETQVVSGTNYRLVVAAQDG------------ 88 (114)
Q Consensus 25 ~~~~GG~~~i~~~-~d~~v~~~~~~Av~~~n~~~~-~~~--~~~~V~~a~~QVVaG~nY~l~v~~~~~------------ 88 (114)
..++|||+++ ++ +||+++++++||+.+||++++ +.| .+.+|+++++|||+|+||+|+++++++
T Consensus 3 ~~~~Gg~~~~-~~~~~~~v~~~~~~av~~~N~~sn~~~~~~~~~~V~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~~ 81 (115)
T 3mwz_A 3 LALRGGYRER-SNQDDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNYRLTLKVAESTCELTSTYNKDT 81 (115)
T ss_dssp CCCSSCCEEE-CTTSCTHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCTTT
T ss_pred cccCCcceEC-CCCCCHHHHHHHHHHHHHHHhhcCCcccceeeeeeeEEEeeccCCEEEEEEEEEEeccccCCCcCCccc
Confidence 4689999997 67 999999999999999999988 665 668999999999999999999999653
Q ss_pred ------CCCceEEEEEEEecCCceEEEeEE
Q 037584 89 ------TATNKYQAVVWENAKQIKKLTSFH 112 (114)
Q Consensus 89 ------~~~~~~~~~V~~~p~~~~~l~sf~ 112 (114)
++...|.++||.+|.++++|++|+
T Consensus 82 C~~~~~~~~~~C~~~V~~~P~~~~~l~~~~ 111 (115)
T 3mwz_A 82 CQANANAAQRTCTTVIYRNMQGEKSINSFE 111 (115)
T ss_dssp CCCCTTSCEEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCCCCCeeEEEEEEEECCCCEEEEcccc
Confidence 256789999999998899999986
No 11
>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} SCOP: d.17.1.2 PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 3sva_A 3s67_A 1r4c_A
Probab=99.92 E-value=3.4e-24 Score=141.95 Aligned_cols=89 Identities=26% Similarity=0.233 Sum_probs=75.6
Q ss_pred CCccccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCc--eEEEEEEEEEEEEeceEeEEEEEEEeeCC-----------
Q 037584 23 TDAALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKME--LKFQSVEKGETQVVSGTNYRLVVAAQDGT----------- 89 (114)
Q Consensus 23 ~~~~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~--~~~~~V~~a~~QVVaG~nY~l~v~~~~~~----------- 89 (114)
.+++++|||+++ +++||+++++++||+.+||+++++. |.+.+|+++++|||+|++|+|+++++++.
T Consensus 5 ~~~~~~Gg~~~~-~~~d~~v~~~a~~av~~~N~~sn~~~~~~~~~v~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~C 83 (120)
T 3gax_A 5 KPPRLVGGPMDA-SVEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNYFLDVELCRTTCTKTQPNLDNC 83 (120)
T ss_dssp -------CCEEE-CTTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEESCC--CCCC
T ss_pred ccCccCCCCEeC-CCCCHHHHHHHHHHHHHHHhccCCcceeeEEEEEEEEEEEecCeEEEEEEEEEeeeccCCCCCcccC
Confidence 357899999996 8999999999999999999999988 57799999999999999999999999852
Q ss_pred ---------CCceEEEEEEEec-CCceEEEeEE
Q 037584 90 ---------ATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ---------~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
+...|.++||.+| .++++|++++
T Consensus 84 ~~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~ 116 (120)
T 3gax_A 84 PFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKST 116 (120)
T ss_dssp CBCSSHHHHCCEEEEEEEEEETTTTEEEEEEEE
T ss_pred CCcCCccccCceEEEEEEEecCCCCeEEeccce
Confidence 3578999999999 9999999875
No 12
>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens}
Probab=99.91 E-value=1.6e-23 Score=140.78 Aligned_cols=88 Identities=24% Similarity=0.303 Sum_probs=79.4
Q ss_pred CccccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCce--EEEEEEEEEEEEeceEeEEEEEEEeeCC------------
Q 037584 24 DAALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMEL--KFQSVEKGETQVVSGTNYRLVVAAQDGT------------ 89 (114)
Q Consensus 24 ~~~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~--~~~~V~~a~~QVVaG~nY~l~v~~~~~~------------ 89 (114)
..+++|||+++ +++||++++++++|+.+||+++++.| .+.+|++|++|||+|+||+|+++++++.
T Consensus 13 ~~~~~Gg~~~~-~~~d~ev~e~a~~Av~~~N~~sn~~~~~~l~~V~~a~~QVVaG~~Y~l~v~v~~t~C~K~~~~~~~~C 91 (131)
T 2ch9_A 13 SRVKPGFPKTI-KTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVEIGRTTCKKNQHLRLDDC 91 (131)
T ss_dssp CSSCCCCCEEC-CTTCHHHHHHHHHHHHHHHHHSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCGGGC
T ss_pred cccCCCCCeeC-CCCCHHHHHHHHHHHHHHHHhCCCCcceEEEEEEEeeeEecCCeEEEEEEEEEcccccCCCCCccccC
Confidence 46789999996 89999999999999999999999886 5699999999999999999999999752
Q ss_pred ------C---CceEEEEEEEec-CCceEEEeEE
Q 037584 90 ------A---TNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ------~---~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
. ...|.++||.+| .++++|++|.
T Consensus 92 ~~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~f~ 124 (131)
T 2ch9_A 92 DFQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLR 124 (131)
T ss_dssp CBCCSTTTCCEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred CcccCcccccccEEEEEEEEecCCCeeEEEEEe
Confidence 1 137999999999 9999999995
No 13
>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata}
Probab=99.91 E-value=6.6e-24 Score=139.89 Aligned_cols=84 Identities=29% Similarity=0.557 Sum_probs=75.9
Q ss_pred cccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCce--EEEEEEEEEEEEeceEeEEEEEEEeeC---------------
Q 037584 26 ALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMEL--KFQSVEKGETQVVSGTNYRLVVAAQDG--------------- 88 (114)
Q Consensus 26 ~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~--~~~~V~~a~~QVVaG~nY~l~v~~~~~--------------- 88 (114)
.++|||+++ +++||+++++++||+. |+++++.| .+.+|++|++|||+|+||+|+++++++
T Consensus 2 ~~~GG~~~i-~~~d~~v~~~a~~Av~--N~~s~~~~~~~~~kV~~a~~QVVaG~~Y~i~v~v~~t~C~K~~~~~~~~~C~ 78 (115)
T 3l0r_A 2 SIPGGWTRQ-DPTEARFLELAHFATS--SQTEGREFYDTVVTVKEVETQVVAGMNYKLTIEISPSVCKIGEVQYSAEQCV 78 (115)
T ss_dssp -CCCSCEEE-CTTCHHHHHHHHHHHT--TCCTTCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEEBTTBCCCTTTCC
T ss_pred CCcccceeC-CCCCHHHHHHHHHHHh--ccccCCCcceEEEEEEEEEEEEEeeEEEEEEEEEecccccccccccccccCc
Confidence 479999996 8899999999999999 88888876 669999999999999999999999864
Q ss_pred ----CCCceEEEEEEEec-CCceEEEeEE
Q 037584 89 ----TATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 89 ----~~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
++...|.++||.+| .++++|++|.
T Consensus 79 ~~~~~~~~~C~~~V~~~PW~~~~~l~~~~ 107 (115)
T 3l0r_A 79 PKDAQQKSTCVAVIYHVPWQNQKSVTSYR 107 (115)
T ss_dssp BSCTTSCEEEEEEEEEEGGGTEEEEEEEE
T ss_pred ccCCCceeEEEEEEEEecCCCeeEEEEEE
Confidence 25678999999999 9999999996
No 14
>1cyu_A Cystatin A, stefin A; proteinase inhibitor (cysteine); NMR {Homo sapiens} SCOP: d.17.1.2 PDB: 1cyv_A 1gd3_A 1dvc_A 1dvd_A 1n9j_A 1nb3_I* 1nb5_I* 3k9m_C 3kfq_C 3kse_D* 1gd4_A
Probab=99.88 E-value=6.8e-24 Score=136.10 Aligned_cols=84 Identities=24% Similarity=0.311 Sum_probs=77.7
Q ss_pred cccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEe-c--
Q 037584 26 ALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWEN-A-- 102 (114)
Q Consensus 26 ~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~-p-- 102 (114)
+++|||+++ +++||+++++++||+.++|+++|+.|.+.+|++|++|||||+||+|+++++++. -++++||+. |
T Consensus 1 ~~~GG~~~~-~~~d~ev~~~a~~av~~~n~~~n~~~~~~~vv~a~~QVVaG~nY~l~v~~~~~~---c~~~~V~~~l~~~ 76 (98)
T 1cyu_A 1 MIPGGLSEA-KPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNK---YLHLKVFKSLPGQ 76 (98)
T ss_dssp CCCSSCSSE-EESCTTHHHHHHHTCTTTTTSSCCSSSCEEEEEEEEECSSSCEEEEEEEECSSC---BCEEEEECCCSSS
T ss_pred CCCcccccC-CCCCHHHHHHHHHHHHHHHhhcCCCcceEEEEEEEEEEecceEEEEEEEEcCCc---EEEEEEecCCCCC
Confidence 479999996 899999999999999999999999999999999999999999999999999986 679999987 5
Q ss_pred CCceEEEeEEe
Q 037584 103 KQIKKLTSFHR 113 (114)
Q Consensus 103 ~~~~~l~sf~~ 113 (114)
.+.++|+||..
T Consensus 77 ~~~~~l~~~q~ 87 (98)
T 1cyu_A 77 NEDLVLTGYQV 87 (98)
T ss_dssp CCCCEEEEEEC
T ss_pred CCCeEEEEEec
Confidence 78999999964
No 15
>2oct_A Cystatin B; stefin, amyloid, domain-swapping, hand shaking, PR isomerization, protein binding; 1.40A {Homo sapiens} PDB: 1stf_I*
Probab=99.88 E-value=9.3e-23 Score=131.08 Aligned_cols=84 Identities=17% Similarity=0.234 Sum_probs=76.6
Q ss_pred cccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEe-c--
Q 037584 26 ALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWEN-A-- 102 (114)
Q Consensus 26 ~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~-p-- 102 (114)
+|+|||+++ +++||++++++++|+.++|++.|..+.+.+++++++|||||+||+|++++++++ .++++||+. |
T Consensus 1 mm~GG~~~~-~~~~~evq~i~~~a~~~~n~~~~~~~~~~~vv~~~tQVVAG~NY~ikv~v~~~~---~~h~~vy~~lp~~ 76 (98)
T 2oct_A 1 MMSGAPSAT-QPATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDED---FVHLRVFQSLPHE 76 (98)
T ss_dssp -CCSSCCCC-EECCHHHHHHHHHHHHHHHHHHTSCCSCCEEEEEEEEEEEEEEEEEEEECSTTC---EEEEEEEEESSTT
T ss_pred CCcccCcCC-CCCCHHHHHHHHHHHHHHHhhcCCccceeEEEEEEEEEeCCEEEEEEEEECCCc---EEEEEEEecCCCC
Confidence 479999995 789999999999999999999998888889999999999999999999999986 789999997 5
Q ss_pred CCceEEEeEEe
Q 037584 103 KQIKKLTSFHR 113 (114)
Q Consensus 103 ~~~~~l~sf~~ 113 (114)
.+..+|+||..
T Consensus 77 ~~~~~l~~~q~ 87 (98)
T 2oct_A 77 NKSLTLSNYQT 87 (98)
T ss_dssp CCCEEEEEEEE
T ss_pred CCceEEEEEec
Confidence 68999999963
No 16
>2bo9_B Human latexin, MUM; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: d.17.1.5 d.17.1.5 PDB: 1wnh_A
Probab=96.59 E-value=0.085 Score=37.62 Aligned_cols=67 Identities=19% Similarity=0.169 Sum_probs=55.3
Q ss_pred CCCChHHHHHHHHHHHHHHhhCCCce---EEEEEEEEEEEEec--eEeEEEEEEEeeCC---CCceEEEEEEEec
Q 037584 36 DPNDPHVIEIGQFAVVEYNKQSKMEL---KFQSVEKGETQVVS--GTNYRLVVAAQDGT---ATNKYQAVVWENA 102 (114)
Q Consensus 36 ~~~d~~v~~~~~~Av~~~n~~~~~~~---~~~~V~~a~~QVVa--G~nY~l~v~~~~~~---~~~~~~~~V~~~p 102 (114)
+++.-..+++|+.|...+|-..++++ .+.+|.+|..++++ |.+|.+++.+.+-. ....|.|+|+-.+
T Consensus 4 ~psh~~a~rAA~vA~hy~N~~~gSP~~l~~L~~V~~a~a~~ip~~G~Ky~l~Fs~e~~~~~~~~~~CsA~Vlf~~ 78 (222)
T 2bo9_B 4 PPTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLYPS 78 (222)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEEEC
T ss_pred CCcchHHHHHHHHHHHHhhcccCCCceeeehhhhhhhhhhhccCCCcEEEEEEEeeeeecCCceeEEEEEEEEcc
Confidence 56677789999999999999877764 55789999999995 68999999999863 4578999998764
No 17
>1kwi_A Protegrin-3 precursor; cathelicidin motif, disulfide, MAD, selenocystine, antimicrobial protein; 2.19A {Sus scrofa} SCOP: d.17.1.3 PDB: 1lxe_A 1n5h_A 1n5p_A 1pfp_A
Probab=92.07 E-value=0.7 Score=29.08 Aligned_cols=62 Identities=15% Similarity=0.025 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEe----ceEeEEEEEEEeeCC------------------CCceEEEE
Q 037584 40 PHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVV----SGTNYRLVVAAQDGT------------------ATNKYQAV 97 (114)
Q Consensus 40 ~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVV----aG~nY~l~v~~~~~~------------------~~~~~~~~ 97 (114)
-.++++...|+..||+++.+...| +.+++.-+.. -|+.+.+.+.+.++- ..+.|...
T Consensus 3 lsY~EAv~~Av~~~N~~S~~~nlF-RLl~~~p~p~~~~d~~~~~~v~FtIkETvC~~~~~~~p~~CdFke~G~vk~C~Gt 81 (101)
T 1kwi_A 3 LSYREAVLRAVDRLNEQSSEANLY-RLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVGT 81 (101)
T ss_dssp HHHHHHHHHHHHHHHHHCCSSEEE-EEEEEC---------CCCEEEEEEEEEEEEESSCCSCGGGSCBCTTCCEEEEEEE
T ss_pred cCHHHHHHHHHHHHhcCCCcccee-eeecccCCCccCCCCCCcceeEEEEeeeecCCCCCCCcccCCccCCCeeeeceEE
Confidence 458899999999999998765433 3344443332 356788888887752 23567777
Q ss_pred EEEec
Q 037584 98 VWENA 102 (114)
Q Consensus 98 V~~~p 102 (114)
|.-.+
T Consensus 82 v~~~~ 86 (101)
T 1kwi_A 82 VTLDQ 86 (101)
T ss_dssp ECCC-
T ss_pred EEecC
Confidence 77655
No 18
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=83.71 E-value=4.7 Score=23.48 Aligned_cols=48 Identities=15% Similarity=0.163 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++....++++-|+.+-.+ +-..+...+|.+-+..|.+| ..|+.+++++
T Consensus 14 S~~S~edAi~nAi~~Ask-Tl~ni~~~eV~e~~~~v~dgkv~~yqv~lkV~ 63 (69)
T 2ux9_A 14 SEEGLEAAIQAALARARK-TLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVG 63 (69)
T ss_dssp ESSCHHHHHHHHHHHHHH-HCCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 445677888888888764 33568889999999999998 4798888875
No 19
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=83.53 E-value=4.5 Score=23.79 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=36.9
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++....++.+.|+.+-.+ +-..+...+|.+-+..|.+| ..|+.+++++
T Consensus 14 S~~S~edAi~nAi~~Ask-Tl~ni~~~eV~e~~~~v~dgkv~~yqv~lKV~ 63 (72)
T 3onr_A 14 SPTSWEQAAAEAVQRARD-SVDDIRVARVIEQDMAVDSAGKITYRIKLEVS 63 (72)
T ss_dssp ESSCHHHHHHHHHHHHHH-HCSCCCEEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 445677888888888764 33567888999999999988 5798888875
No 20
>2vxa_A Dodecin; flavoprotein, flavin, riboflavin, lumichrome, archaea; HET: RBF; 2.60A {Halorhodospira halophila}
Probab=83.46 E-value=5 Score=23.57 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++....++++-|+.+-++ +-..+...+|.+-+..|.+| ..|+.+++++
T Consensus 15 S~~S~edAi~nAi~~Ask-Tl~ni~~~eV~e~r~~v~dgki~~yqV~lKV~ 64 (72)
T 2vxa_A 15 SPNGIEEAVNNAIARAGE-TLRHLRWFEVVDTRGHIEGGRVNHWQVTVKVG 64 (72)
T ss_dssp ESSCHHHHHHHHHHHHHH-HCCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHh-hccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 455677888888888764 33568889999999999998 4788888875
No 21
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=83.17 E-value=5 Score=23.37 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=37.8
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++....++++-|+.+-.+ +-..+...+|.+-+..|.+| ..|+.+++++
T Consensus 14 S~~S~edAi~nAi~~Ask-Tl~ni~~~eV~e~~~~v~dgkv~~yqv~lkv~ 63 (69)
T 2yiz_A 14 SPDGVDAAIQGGLARAAQ-TMRALDWFEVQSIRGHLVDGAVAHFQVTMKVG 63 (69)
T ss_dssp ETTCHHHHHHHHHHHHHH-HCCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 456677888888888764 33568889999999999998 4798888875
No 22
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=82.30 E-value=4.7 Score=23.45 Aligned_cols=48 Identities=8% Similarity=0.077 Sum_probs=37.5
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++....++++.|+.+-++ +-..+...+|.+-+..|.+| ..|+.+++++
T Consensus 12 S~~S~edAi~nAi~~Ask-Tl~ni~~~eV~e~~~~v~dgkv~~yqv~lKV~ 61 (68)
T 2cc6_A 12 SEESFTAAADDAIDRAED-TLDNVVWAEVVDQGVEIGAVEERTYQTEVQVA 61 (68)
T ss_dssp ESSCHHHHHHHHHHHHHH-HCSCEEEEEEEEEEEECTTSSSCEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 445677888888888764 33568889999999999888 5899988875
No 23
>3brd_D Protein LIN-12; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans}
Probab=44.09 E-value=5.4 Score=19.06 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=13.4
Q ss_pred CCCceEEEEEEEec-CCc
Q 037584 89 TATNKYQAVVWENA-KQI 105 (114)
Q Consensus 89 ~~~~~~~~~V~~~p-~~~ 105 (114)
.+.+..+|.||..| ++.
T Consensus 7 RKRr~i~A~vW~PPME~~ 24 (29)
T 3brd_D 7 RKRRMINASVWMPPMENE 24 (29)
T ss_pred hhheeecccccCCCccCc
Confidence 36788999999888 654
No 24
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=31.19 E-value=13 Score=23.24 Aligned_cols=9 Identities=33% Similarity=0.759 Sum_probs=4.8
Q ss_pred ccccceeee
Q 037584 25 AALVGGWKP 33 (114)
Q Consensus 25 ~~~~GG~~~ 33 (114)
...+.||..
T Consensus 23 ~~Cp~gw~~ 31 (146)
T 3bx4_B 23 ADCPSGWSS 31 (146)
T ss_dssp --CCTTCEE
T ss_pred CCCCcCcEe
Confidence 356677765
Done!