Query 037584
Match_columns 114
No_of_seqs 117 out of 998
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 03:17:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037584.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037584hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eqka_ d.17.1.2 (A:) Phytocys 100.0 1.5E-30 1.1E-34 167.1 13.7 91 24-114 5-96 (102)
2 d1roaa_ d.17.1.2 (A:) Cystatin 99.9 1.6E-23 1.1E-27 135.6 12.6 83 29-112 1-107 (111)
3 d1cewi_ d.17.1.2 (I:) Cystatin 99.9 6.5E-23 4.7E-27 131.9 11.9 83 29-112 1-106 (108)
4 d1r4ca_ d.17.1.2 (A:) Cystatin 99.9 9.6E-23 7E-27 131.5 12.8 83 29-112 1-106 (110)
5 d1stfi_ d.17.1.2 (I:) Cystatin 99.8 4.7E-19 3.4E-23 111.7 7.8 83 26-112 1-86 (98)
6 d1nb5i_ d.17.1.2 (I:) Cystatin 99.7 1.4E-17 1E-21 104.6 8.8 83 26-112 1-86 (98)
7 d1kwia_ d.17.1.3 (A:) Cathelic 99.4 7.8E-13 5.7E-17 82.8 6.7 69 41-109 3-93 (98)
8 d2bo9b1 d.17.1.5 (B:1-98) Late 97.4 0.0036 2.6E-07 37.9 12.2 68 33-101 2-77 (98)
9 d2o9ux1 d.17.1.1 (X:1001-1096) 86.1 1.8 0.00013 24.3 9.7 78 29-112 1-90 (96)
10 d2cc6a1 d.230.2.1 (A:2-65) Fla 81.3 2.6 0.00019 22.8 5.4 48 38-86 11-60 (64)
11 d2ux9a1 d.230.2.1 (A:2-67) Unc 79.8 3.2 0.00023 22.6 6.9 48 38-86 13-62 (66)
12 d2bu1a1 d.85.1.1 (A:1-129) MS2 22.3 37 0.0027 19.8 2.9 19 60-78 57-76 (129)
13 d1repc2 a.4.5.10 (C:144-246) R 21.7 46 0.0033 18.6 3.3 37 43-81 63-99 (103)
14 d2nrac2 a.4.5.10 (C:152-268) R 20.2 30 0.0022 19.8 2.3 40 43-82 74-113 (117)
No 1
>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]}
Probab=99.97 E-value=1.5e-30 Score=167.11 Aligned_cols=91 Identities=33% Similarity=0.641 Sum_probs=87.3
Q ss_pred CccccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEec-
Q 037584 24 DAALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWENA- 102 (114)
Q Consensus 24 ~~~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~p- 102 (114)
...++|||.++.|++||+++++++||+.+||+++++.|+|++|++|++|||+|+||+|++++.+++..+.|+++||++|
T Consensus 5 ~~~l~GG~~~i~d~nd~~v~e~a~~Av~~~N~~~~~~~~~vkV~~a~~QVVaG~~Y~i~v~~~~~~~~k~c~~~Vw~~pW 84 (102)
T d1eqka_ 5 GGPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPW 84 (102)
T ss_dssp SCSCSSSSEEECCTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTT
T ss_pred CCcccCCcccCCCCCCHHHHHHHHHHHHHHhhcCCCceEEEEEEEEeeeeccceeEEEEEEEccCCccEEEEEEEEEeeC
Confidence 5779999999768999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred CCceEEEeEEeC
Q 037584 103 KQIKKLTSFHRL 114 (114)
Q Consensus 103 ~~~~~l~sf~~~ 114 (114)
+++++|++|++.
T Consensus 85 ~~~~~l~~f~~~ 96 (102)
T d1eqka_ 85 MDFKELQEFKPV 96 (102)
T ss_dssp TTBCCEEEEECC
T ss_pred CCccEEEEEEEc
Confidence 999999999984
No 2
>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.6e-23 Score=135.59 Aligned_cols=83 Identities=27% Similarity=0.293 Sum_probs=74.5
Q ss_pred ceeeeCCCCCChHHHHHHHHHHHHHHhhCCC-ce--EEEEEEEEEEEEeceEeEEEEEEEeeCC----------------
Q 037584 29 GGWKPIEDPNDPHVIEIGQFAVVEYNKQSKM-EL--KFQSVEKGETQVVSGTNYRLVVAAQDGT---------------- 89 (114)
Q Consensus 29 GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~-~~--~~~~V~~a~~QVVaG~nY~l~v~~~~~~---------------- 89 (114)
|||.++ |++||+++++++||+.+||+++++ .| .+++|++|++|||+|++|+|+++++++.
T Consensus 1 GG~~~~-~~~d~~v~~~~~~Av~~~N~~sn~~~~~~~l~~V~~a~~QVVaG~~Y~l~~~i~~T~C~K~~~~~~~c~~~~~ 79 (111)
T d1roaa_ 1 GGIHAT-DLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPFNDQ 79 (111)
T ss_dssp CCEEEE-CTTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSSCCBCCS
T ss_pred CCCccC-CCCCHHHHHHHHHHHHHHHHhcCCccceeEEEEEEEEEEEEecCcEEEEEEEEEecccccccccccccccccC
Confidence 899996 999999999999999999998874 44 5699999999999999999999997652
Q ss_pred ----CCceEEEEEEEec-CCceEEEeEE
Q 037584 90 ----ATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ----~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
+...|+++||.+| .++.+|++++
T Consensus 80 ~~~~~~~~C~~~V~~~PW~~~~~v~~~~ 107 (111)
T d1roaa_ 80 PKLKEEEFCSFQINEVPWEDKISILNYK 107 (111)
T ss_dssp TTCCCCEEEEEEEEEETTTTEEEEEEEE
T ss_pred ccccceEEEEEEEEEcccCCceEEeecc
Confidence 3568999999999 9999999885
No 3
>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.89 E-value=6.5e-23 Score=131.87 Aligned_cols=83 Identities=30% Similarity=0.325 Sum_probs=75.1
Q ss_pred ceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceE--EEEEEEEEEEEeceEeEEEEEEEeeCC-----------------
Q 037584 29 GGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELK--FQSVEKGETQVVSGTNYRLVVAAQDGT----------------- 89 (114)
Q Consensus 29 GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~--~~~V~~a~~QVVaG~nY~l~v~~~~~~----------------- 89 (114)
|||.++ +++||+++++++||+.+||+++++.|. +++|++|++|||+|++|+|+++++++.
T Consensus 1 Gg~~~~-~~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~~V~~a~~QVVaG~~Y~l~~~i~~T~C~k~~~~~~~c~~~~~~ 79 (108)
T d1cewi_ 1 GAPVPV-DENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFHDEP 79 (108)
T ss_dssp CCCEEC-CTTCHHHHHHHHHHTHHHHTTSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTCTTHHHHHHHHCS
T ss_pred CCCccC-CCCCHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEEeecCcEEEEEEEEEecccccccccccccccccCc
Confidence 899996 999999999999999999999999875 589999999999999999999997642
Q ss_pred ---CCceEEEEEEEec-CCceEEEeEE
Q 037584 90 ---ATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ---~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
+...|+++||.+| .++++|++++
T Consensus 80 ~~~~~~~C~~~V~~~pW~~~~~v~~~~ 106 (108)
T d1cewi_ 80 EMAKYTTCTFVVYSIPWLNQIKLLESK 106 (108)
T ss_dssp SCSCEEEEEEEEEEETTTTEEEEEEEE
T ss_pred ccCceEEEEEEEEEeccCCceEeeecc
Confidence 2468999999999 9999999874
No 4
>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=9.6e-23 Score=131.45 Aligned_cols=83 Identities=25% Similarity=0.233 Sum_probs=75.3
Q ss_pred ceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceE--EEEEEEEEEEEeceEeEEEEEEEeeCC-----------------
Q 037584 29 GGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELK--FQSVEKGETQVVSGTNYRLVVAAQDGT----------------- 89 (114)
Q Consensus 29 GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~--~~~V~~a~~QVVaG~nY~l~v~~~~~~----------------- 89 (114)
|||.++ ++|||+++++++||+.+||+++++.|. +++|++|++|||+|++|+|+++++++.
T Consensus 1 Gg~~~~-~~~d~~v~~~~~~Av~~~N~~s~~~~~~~~~kV~~a~~QvVaG~~Y~l~~~i~~T~C~k~~~~~~~c~~~~~~ 79 (110)
T d1r4ca_ 1 GGPMDA-SVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQP 79 (110)
T ss_dssp CCCEEC-CTTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEETTSSCGGGCCBCCST
T ss_pred CCCccC-CCCCHHHHHHHHHHHHHHHhhCCccceeEEEEEEEEEEEeccCCEEEEEEEEeecccccCccccccCccccCc
Confidence 899995 999999999999999999999999875 489999999999999999999997652
Q ss_pred ---CCceEEEEEEEec-CCceEEEeEE
Q 037584 90 ---ATNKYQAVVWENA-KQIKKLTSFH 112 (114)
Q Consensus 90 ---~~~~~~~~V~~~p-~~~~~l~sf~ 112 (114)
+...|+++||.+| .++++|++++
T Consensus 80 ~~~~~~~C~~~V~~~PW~~~~~l~~~~ 106 (110)
T d1r4ca_ 80 HLKRKAFCSFQIYAVPWQGTMTLSKST 106 (110)
T ss_dssp TTCCEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred cccceEEEEEEEEEeccCCceEEeeee
Confidence 2457999999999 9999999875
No 5
>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.7e-19 Score=111.66 Aligned_cols=83 Identities=17% Similarity=0.238 Sum_probs=75.8
Q ss_pred cccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEe-c-C
Q 037584 26 ALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWEN-A-K 103 (114)
Q Consensus 26 ~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~-p-~ 103 (114)
+|+|||++ ..+.+|++|++++....+.+++.|..|...++++.++|||||+||+|+++++++. .++++||+. | .
T Consensus 1 mm~GG~s~-~~~at~Eiq~i~d~Vk~~~e~k~~~k~~~f~av~yktQvVaG~NYfIKV~vg~~~---~~HlrV~~~Lp~~ 76 (98)
T d1stfi_ 1 MMSGAPSA-TQPATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDED---FVHLRVFQSLPHE 76 (98)
T ss_dssp CCBSCCCC-CEECCHHHHHHHHTTHHHHHHHHTCCCSCCEEEEEEEEESSEEEEEEEEECSSSC---EEEEEEEEECGGG
T ss_pred CcCCCCCC-CCCCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEEEEEEcceeEEEEEEeCCCc---EEEEEEeccCCCC
Confidence 58999999 5789999999999999999999999887779999999999999999999999987 899999997 7 4
Q ss_pred -CceEEEeEE
Q 037584 104 -QIKKLTSFH 112 (114)
Q Consensus 104 -~~~~l~sf~ 112 (114)
+..+|+++.
T Consensus 77 ~~~l~L~~~q 86 (98)
T d1stfi_ 77 NKPLTLSNYQ 86 (98)
T ss_dssp CCCCEEEEEE
T ss_pred CCceEEEEEe
Confidence 568999985
No 6
>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.4e-17 Score=104.57 Aligned_cols=83 Identities=24% Similarity=0.328 Sum_probs=75.2
Q ss_pred cccceeeeCCCCCChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEEEEEeeCCCCceEEEEEEEe-c-C
Q 037584 26 ALVGGWKPIEDPNDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLVVAAQDGTATNKYQAVVWEN-A-K 103 (114)
Q Consensus 26 ~~~GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~v~~~~~~~~~~~~~~V~~~-p-~ 103 (114)
+|+|||++ ..+.+|++|++++....+.+++.|..+.-.+.++.++|||||+||+|+++++++. ..+++||+. | .
T Consensus 1 mm~GG~s~-~~~at~Eiq~I~d~Vk~~le~k~g~~~~~F~av~yktQvVAGtNYfIKV~vG~~~---~vHlrVf~~Lp~~ 76 (98)
T d1nb5i_ 1 MIPGGLSE-AKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNK---YMHLKVFKSLPGQ 76 (98)
T ss_dssp CCTTSCCC-CEECCHHHHHHHHHHHHHHHHHHCCCCSCCEEEEEEEEESSEEEEEEEEECSSSC---EEEEEEEEECTTS
T ss_pred CccCCCCC-CCCCCHHHHHHHHHHHHHHHHhcCCCcceEEEEEEEEEEEcceeEEEEEEeCCCc---EEEEEEeccCCCC
Confidence 58999999 5889999999999999999999998887778899999999999999999999987 899999997 7 4
Q ss_pred -CceEEEeEE
Q 037584 104 -QIKKLTSFH 112 (114)
Q Consensus 104 -~~~~l~sf~ 112 (114)
+..+|+++.
T Consensus 77 ~~~l~L~~~q 86 (98)
T d1nb5i_ 77 NEDLVLTGYQ 86 (98)
T ss_dssp CCCCEEEEEE
T ss_pred CCccEEEEEE
Confidence 578999885
No 7
>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.36 E-value=7.8e-13 Score=82.75 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHhhCCCce--EEEEEEEEEEEEe-ceEeEEEEEEEeeCC------------------CCceEEEEEE
Q 037584 41 HVIEIGQFAVVEYNKQSKMEL--KFQSVEKGETQVV-SGTNYRLVVAAQDGT------------------ATNKYQAVVW 99 (114)
Q Consensus 41 ~v~~~~~~Av~~~n~~~~~~~--~~~~V~~a~~QVV-aG~nY~l~v~~~~~~------------------~~~~~~~~V~ 99 (114)
.+++++++|+.+||+++++.+ .+.+|.+++.|+| +|++|+|++.++++. ..+.|++.||
T Consensus 3 sy~eav~~Al~~~N~~s~~~~~f~l~~v~~a~~q~v~~g~~y~l~f~i~eT~C~k~~~~~~~~C~~~~~~~~~~C~~~V~ 82 (98)
T d1kwia_ 3 SYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVGTVT 82 (98)
T ss_dssp HHHHHHHHHHHHHHHHCCSSEEEEEEEEC---------CCCEEEEEEEEEEEEESSCCSCGGGSCBCTTCCEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCCcccEEEEEEeecceeeecCCcEEEEEEEEEEeecCCcCCCChHHCccccCCcceEEEEEEE
Confidence 588999999999999999875 5589999999999 899999999998763 3467999999
Q ss_pred Eec-CCceEEE
Q 037584 100 ENA-KQIKKLT 109 (114)
Q Consensus 100 ~~p-~~~~~l~ 109 (114)
..| .+...|+
T Consensus 83 ~~pw~~~~~vt 93 (98)
T d1kwia_ 83 LDQIKDPLDIT 93 (98)
T ss_dssp CC----CCEEE
T ss_pred EcCcCCEEEEE
Confidence 999 7777664
No 8
>d2bo9b1 d.17.1.5 (B:1-98) Latexin {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.44 E-value=0.0036 Score=37.92 Aligned_cols=68 Identities=21% Similarity=0.178 Sum_probs=55.7
Q ss_pred eCCCCCChHHHHHHHHHHHHHHhhCCCce---EEEEEEEEEEEEec--eEeEEEEEEEeeCC---CCceEEEEEEEe
Q 037584 33 PIEDPNDPHVIEIGQFAVVEYNKQSKMEL---KFQSVEKGETQVVS--GTNYRLVVAAQDGT---ATNKYQAVVWEN 101 (114)
Q Consensus 33 ~i~~~~d~~v~~~~~~Av~~~n~~~~~~~---~~~~V~~a~~QVVa--G~nY~l~v~~~~~~---~~~~~~~~V~~~ 101 (114)
+| +++.-..+++|+-|...+|-..+++. .+.+|.+|..++++ |-+|+|++.+.+-. ....|.|+|+-.
T Consensus 2 ei-~psh~pA~rAA~vA~hy~N~~~GSP~rl~~L~~V~~a~~e~ip~~G~Ky~L~Fs~e~~~~~e~~~~CsA~Vlfp 77 (98)
T d2bo9b1 2 EI-PPTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLYP 77 (98)
T ss_dssp BC-CTTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEEE
T ss_pred CC-CCcchHHHHHHHHHHHHhhcccCCCceeeehhHHHhhhhhhccccCcEEEEEEEhhhcccccccceeEEEEEEc
Confidence 44 67778889999999999999877763 55899999999995 68999999998853 334799999874
No 9
>d2o9ux1 d.17.1.1 (X:1001-1096) Monellin, B & A chains together {Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]}
Probab=86.11 E-value=1.8 Score=24.35 Aligned_cols=78 Identities=33% Similarity=0.498 Sum_probs=53.8
Q ss_pred ceeeeCCCCCChHHHHHHHHHHHHHHhhCC-CceEEEEEEEEEEEE----------eceEeEEEEEEEeeCCCCceEEEE
Q 037584 29 GGWKPIEDPNDPHVIEIGQFAVVEYNKQSK-MELKFQSVEKGETQV----------VSGTNYRLVVAAQDGTATNKYQAV 97 (114)
Q Consensus 29 GG~~~i~~~~d~~v~~~~~~Av~~~n~~~~-~~~~~~~V~~a~~QV----------VaG~nY~l~v~~~~~~~~~~~~~~ 97 (114)
|.|.-| |. -|--|.+..||+.+-|+-.. ..+.|.+|++-...- ..|..|.+.+-+.+. .+.+.
T Consensus 1 geweii-di-gpftqnlgkfavdeenkigqygrltfnkvirpcmkktiyenegfreikgyeyqlyvyasdk----lfrad 74 (96)
T d2o9ux1 1 GEWEII-DI-GPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFREIKGYEYQLYVYASDK----LFRAD 74 (96)
T ss_dssp CCCEEE-CC-SHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCSEEEEEEEEEEEETTE----EC-CE
T ss_pred CCceEE-Ee-cchhhhhcceeecccccccccceeehhHHhHHHhhhhhhcccCceeccCcEEEEEEEecch----hhhhh
Confidence 567765 55 48889999999999887533 467888888754332 357778888877664 67777
Q ss_pred EEEec-CCceEEEeEE
Q 037584 98 VWENA-KQIKKLTSFH 112 (114)
Q Consensus 98 V~~~p-~~~~~l~sf~ 112 (114)
+-+.- ..-++|.-|+
T Consensus 75 isedyktrgrkllrfn 90 (96)
T d2o9ux1 75 ISEDYKTRGRKLLRFN 90 (96)
T ss_dssp EEEETTTCCEEEEECC
T ss_pred hhhhhhhccceeEecc
Confidence 77665 5556666664
No 10
>d2cc6a1 d.230.2.1 (A:2-65) Flavin-binding protein dodecin {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=81.26 E-value=2.6 Score=22.85 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=36.6
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++..+.++.+.|+.+-.+. -..+...+|.+-+..|.+| ..|+.+++++
T Consensus 11 S~~S~edAi~~Ai~~AskT-l~ni~~~eV~e~~~~v~dgkv~~yqv~lKv~ 60 (64)
T d2cc6a1 11 SEESFTAAADDAIDRAEDT-LDNVVWAEVVDQGVEIGAVEERTYQTEVQVA 60 (64)
T ss_dssp ESSCHHHHHHHHHHHHHHH-CSCEEEEEEEEEEEECTTSSSCEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHhhC-ccCceEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 4456778888888876643 3567888999988888888 5798888875
No 11
>d2ux9a1 d.230.2.1 (A:2-67) Uncharacterized protein TTHA1431 {Thermus thermophilus [TaxId: 274]}
Probab=79.79 E-value=3.2 Score=22.62 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=37.0
Q ss_pred CChHHHHHHHHHHHHHHhhCCCceEEEEEEEEEEEEece--EeEEEEEEEe
Q 037584 38 NDPHVIEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSG--TNYRLVVAAQ 86 (114)
Q Consensus 38 ~d~~v~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~l~v~~~ 86 (114)
++..+.++.+.|+.+-.+. -..+...+|.+-+..|.+| ..|+.+++++
T Consensus 13 S~~S~edAi~~Ai~~AskT-l~ni~~~eV~e~~~~v~dg~v~~yqv~lKV~ 62 (66)
T d2ux9a1 13 SEEGLEAAIQAALARARKT-LRHLDWFEVKEIRGTIGEAGVKEYQVVLEVG 62 (66)
T ss_dssp ESSCHHHHHHHHHHHHHHH-CCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHhhhC-ccCcEEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 4456778888888887643 3567889999989899988 4788888875
No 12
>d2bu1a1 d.85.1.1 (A:1-129) MS2 virus coat protein {Bacteriophage MS2 [TaxId: 12022]}
Probab=22.32 E-value=37 Score=19.82 Aligned_cols=19 Identities=32% Similarity=0.358 Sum_probs=13.7
Q ss_pred ceEE-EEEEEEEEEEeceEe
Q 037584 60 ELKF-QSVEKGETQVVSGTN 78 (114)
Q Consensus 60 ~~~~-~~V~~a~~QVVaG~n 78 (114)
+|.. ++|-++-+|+|.|..
T Consensus 57 kytikvevpkv~tq~v~gve 76 (129)
T d2bu1a1 57 KYTIKVEVPKVATQTVGGVE 76 (129)
T ss_dssp EEEEEEEEEEEEEEEETTEE
T ss_pred eEEEEEeccceeeeeeCCEE
Confidence 4554 677788888888864
No 13
>d1repc2 a.4.5.10 (C:144-246) RepE54 {Escherichia coli, mini-F plasmid [TaxId: 562]}
Probab=21.72 E-value=46 Score=18.56 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEE
Q 037584 43 IEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRL 81 (114)
Q Consensus 43 ~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l 81 (114)
+.+++-|+++.|+.++-.+.+..+-+. +-|.|..|.+
T Consensus 63 ~~VL~pai~EIn~~t~~~~~y~~~K~G--RkV~~i~F~~ 99 (103)
T d1repc2 63 RRFLQVCVNEINSRTPMRLSYIEKKKG--RQTTHIVFSF 99 (103)
T ss_dssp HHTHHHHHHHHHHHSSEEEEEEEEESS--SSEEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCeEEEEEEEecC--CeEEEEEEEE
Confidence 457889999999876544444443322 2445555443
No 14
>d2nrac2 a.4.5.10 (C:152-268) Replication initiation protein PI {Escherichia coli [TaxId: 562]}
Probab=20.18 E-value=30 Score=19.84 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhhCCCceEEEEEEEEEEEEeceEeEEEE
Q 037584 43 IEIGQFAVVEYNKQSKMELKFQSVEKGETQVVSGTNYRLV 82 (114)
Q Consensus 43 ~~~~~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~l~ 82 (114)
+.+++-|+.++|+.++=...+..|..=+..-|.|+.|.+.
T Consensus 74 ~rVL~pAi~EIn~~t~i~~~~~~i~~K~GRkV~~i~F~f~ 113 (117)
T d2nrac2 74 RDVLNKAIAEIKKKTEISFVGFTVHEKEGRKISKLKFEFV 113 (117)
T ss_dssp HHTHHHHHHHHHHHSSEEEEEEEEEECCTTSCCEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCceEEEEEEeccCCCeEEEEEEEEE
Confidence 5788999999998765334444442211123555555544
Done!