BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037587
(464 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/428 (70%), Positives = 348/428 (81%), Gaps = 2/428 (0%)
Query: 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASN 60
MLSR A+ +SHGQDSSYFLGW+ YE NPY ++HN +GIIQMGLAENQL FDLLESWLA N
Sbjct: 1 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKN 60
Query: 61 QEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTA 120
EA K+NGES+F ELALFQDYHG P KK +V MA IRGNKV FDPN LVLTAG+T+
Sbjct: 61 PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 120
Query: 121 ANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180
ANET +FCLADPG+A L+PTPYYPGFDRDLKWR GVEIVPIHC+SSNGF+IT +ALE AY
Sbjct: 121 ANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 180
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240
Q+A+ NL+VKGVL+TNPSNPLGT MT EL L++F + K IH++SDEIYSGT F SP
Sbjct: 181 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP- 239
Query: 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS 300
SFIS+ME + DRN DE+ ++W R+H+VYSLSKD +PGFRVG IYSN++ VV+AATKMS
Sbjct: 240 -SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 298
Query: 301 SFGLVSSQTQYLLSRMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLF 360
SFGLVSSQTQ+LLS MLSDKK T NY VSGL+ +GI CL NAGLF
Sbjct: 299 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 358
Query: 361 CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQV 420
CWVDMRHLL SNTFEAE ELWKKI++EV LNISPGSSCHC EPGWFR+CFAN+ E TL +
Sbjct: 359 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 418
Query: 421 ALQRIKVF 428
A+QR+K F
Sbjct: 419 AMQRLKAF 426
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/428 (70%), Positives = 348/428 (81%), Gaps = 2/428 (0%)
Query: 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASN 60
MLSR A+ +SHGQDSSYFLGW+ YE NPY ++HN +GIIQMGLAENQL FDLLESWLA N
Sbjct: 3 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKN 62
Query: 61 QEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTA 120
EA K+NGES+F ELALFQDYHG P KK +V MA IRGNKV FDPN LVLTAG+T+
Sbjct: 63 PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 122
Query: 121 ANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180
ANET +FCLADPG+A L+PTPYYPGFDRDLKWR GVEIVPIHC+SSNGF+IT +ALE AY
Sbjct: 123 ANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 182
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240
Q+A+ NL+VKGVL+TNPSNPLGT MT EL L++F + K IH++SDEIYSGT F SP
Sbjct: 183 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP- 241
Query: 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS 300
SFIS+ME + DRN DE+ ++W R+H+VYSLSKD +PGFRVG IYSN++ VV+AATKMS
Sbjct: 242 -SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300
Query: 301 SFGLVSSQTQYLLSRMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLF 360
SFGLVSSQTQ+LLS MLSDKK T NY VSGL+ +GI CL NAGLF
Sbjct: 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 360
Query: 361 CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQV 420
CWVDMRHLL SNTFEAE ELWKKI++EV LNISPGSSCHC EPGWFR+CFAN+ E TL +
Sbjct: 361 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420
Query: 421 ALQRIKVF 428
A+QR+K F
Sbjct: 421 AMQRLKAF 428
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/428 (70%), Positives = 348/428 (81%), Gaps = 2/428 (0%)
Query: 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASN 60
MLSR A+ +SHGQDSSYFLGW+ YE NPY ++HN +GIIQMGLAENQL FDLLESWLA N
Sbjct: 3 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKN 62
Query: 61 QEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTA 120
EA K+NGES+F ELALFQDYHG P KK +V MA IRGNKV FDPN LVLTAG+T+
Sbjct: 63 PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 122
Query: 121 ANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180
ANET +FCLADPG+A L+PTPYYPGFDRDLKWR GVEIVPIHC+SSNGF+IT +ALE AY
Sbjct: 123 ANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 182
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240
Q+A+ NL+VKGVL+TNPSNPLGT MT EL L++F + K IH++SDEIYSGT F SP
Sbjct: 183 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP- 241
Query: 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS 300
SFIS+ME + DRN DE+ ++W R+H+VYSLSKD +PGFRVG IYSN++ VV+AATKMS
Sbjct: 242 -SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300
Query: 301 SFGLVSSQTQYLLSRMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLF 360
SFGLVSSQTQ+LLS MLSDKK T NY VSGL+ +GI CL NAGLF
Sbjct: 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 360
Query: 361 CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQV 420
CWVDMRHLL SNTFEAE ELWKKI++EV LNISPGSSCHC EPGWFR+CFAN+ E TL +
Sbjct: 361 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420
Query: 421 ALQRIKVF 428
A+QR+K F
Sbjct: 421 AMQRLKAF 428
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 602 bits (1553), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/414 (69%), Positives = 330/414 (79%), Gaps = 10/414 (2%)
Query: 16 SYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFR 75
SYFLGW+ YE NPY ++HN +GIIQMGLAENQL FDLLESWLA N EA K+NGES+F
Sbjct: 1 SYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFA 60
Query: 76 ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDA 135
ELALFQDYHG P KK +V MA IRGNKV FDPN LVLTAG+T+ANET +FCLADPG+A
Sbjct: 61 ELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA 120
Query: 136 FLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195
L+PTPYYPGFDRDLKWR GVEIVPIHC+SSNGF+IT +ALE AYQ+A+ NL+VKGVL+
Sbjct: 121 VLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLV 180
Query: 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255
TNPSNPLGT MT EL L++F + K IH++SDEIYSGT F SP SFIS+ME +
Sbjct: 181 TNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP--SFISVMEVL----- 233
Query: 256 DESDDLWSRIHIVYSLS-KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLS 314
D++W R+H+VYSLS KD +PGFRVG IYSN++ VV+AATKMSSFGLVSSQTQ+LLS
Sbjct: 234 --KDEVWQRVHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLS 291
Query: 315 RMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTF 374
MLSDKK T NY VSGL+ +GI CL NAGLFCWVDMRHLL SNTF
Sbjct: 292 AMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTF 351
Query: 375 EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428
EAE ELWKKI++EV LNISPGSSCHC EPGWFR+CFAN+ E TL +A+QR+K F
Sbjct: 352 EAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 405
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 225/430 (52%), Positives = 313/430 (72%), Gaps = 7/430 (1%)
Query: 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASN 60
+LS++A+ + HG++S YF GW+AY+++P+ L NP+G+IQMGLAENQL DL+E W+ N
Sbjct: 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRN 60
Query: 61 QEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTA 120
+ + G F+ +A FQDYHG P+ +K + K M + RG +V+FDP ++V+ G+T
Sbjct: 61 PKG-SICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATG 119
Query: 121 ANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180
ANET++FCLADPGDAFL+P+PYYP F+RDL+WR GV+++PIHC SSN F+IT A++ AY
Sbjct: 120 ANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240
+ AQ N+KVKG+++TNPSNPLGT + L +++F+ IH+V DEIY+ TVFD+P
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP- 238
Query: 241 SSFISIMEAVMDRNIDESD-DLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299
F+SI E + ++ + + DL +HIVYSLSKD +PGFRVG+IYS N+ VV+ A KM
Sbjct: 239 -QFVSIAEILDEQEMTYCNKDL---VHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKM 294
Query: 300 SSFGLVSSQTQYLLSRMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGL 359
SSFGLVS+QTQY L+ MLSD+KF N+ +GL+V GI+CLK+NAGL
Sbjct: 295 SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGL 354
Query: 360 FCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQ 419
FCW+D+R LL +TF++E LW+ II +V LN+SPGSS C EPGWFR+CFAN+ + T+
Sbjct: 355 FCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVD 414
Query: 420 VALQRIKVFA 429
+AL RI+ F
Sbjct: 415 IALARIRRFV 424
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 163/376 (43%), Gaps = 53/376 (14%)
Query: 61 QEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD--PNKLVLTAGS 118
+EAV + GE + + P EL + +A+ G + K D P+++V+T G+
Sbjct: 61 EEAVRFLQKGEVKYTD----------PRGIYELREGIAKRIGERYKKDISPDQVVVTNGA 110
Query: 119 TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALEN 178
A L DPGD ++ +P + + + G V + S F+ ++ +E
Sbjct: 111 KQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV-VETFMSKNFQPSLEEVEG 169
Query: 179 AYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238
L K K VLI +P+NP G + L L+ +K + +I+SDE+Y V+
Sbjct: 170 ------LLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD 223
Query: 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK 298
+S + + E + RI + SK SM G+RVG + S +E+V +A +K
Sbjct: 224 EFTSILDVSEG------------FDRIVYINGFSKSHSMTGWRVGYLIS-SEKVATAVSK 270
Query: 299 MSSF--GLVSSQTQYLLSRMLS-DKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKS 355
+ S +++ QY + L D + V LK G++ ++
Sbjct: 271 IQSHTTSCINTVAQYAALKALEVDNSYMVQ-------TFKERKNFVVERLKKMGVKFVEP 323
Query: 356 NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITE 415
+ + +R + + ++++ E + + PGS+ +PG+ R+ FA +
Sbjct: 324 EGAFYLFFKVRG--------DDVKFCERLLEEKKVALVPGSAFL--KPGFVRLSFAT-SI 372
Query: 416 ETLQVALQRIKVFAQS 431
E L AL RI+ F S
Sbjct: 373 ERLTEALDRIEDFLNS 388
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 101 RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160
R +V P +++T G + A +A+PGD L+ P+Y ++ K GV+++P
Sbjct: 94 RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKI-AGVKLIP 152
Query: 161 IHCSSSNGFRITISALENAYQQAQT-LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSK 219
+ GF I Q ++ +N + KG++++NP NP G E +L+ ++
Sbjct: 153 VTRRXEEGFAIP--------QNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAE 204
Query: 220 SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG 279
+ ++ DE+YS VF +S +SI ESD ++ ++ S+S FS G
Sbjct: 205 RHGLFLIVDEVYSEIVFRGEFASALSI----------ESD----KVVVIDSVSXKFSACG 250
Query: 280 FRVGMIYSNNERVVSAATKMS 300
RVG + + NE ++S A K++
Sbjct: 251 ARVGCLITRNEELISHAXKLA 271
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 159/392 (40%), Gaps = 55/392 (14%)
Query: 57 LASNQEAVELKRNG--------------------ESLFRELALFQDYHGFPDAKKELVKL 96
+A N +A+EL+R G E+ R LA + + P EL +
Sbjct: 17 VAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREA 76
Query: 97 MARI--RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRP 154
+A R N + P + ++T G + A L + DPGD ++ +PY+ + +++
Sbjct: 77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG 136
Query: 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214
GV +V + GF + + + + + + K +++ +P+NP G + L L
Sbjct: 137 GV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEAL 189
Query: 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274
+ ++VSDEIY +++ E + L V +K
Sbjct: 190 ARLAVEHDFYLVSDEIYEHLLYEG---------EHFSPGRVAPEHTL-----TVNGAAKA 235
Query: 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT--QYLLSRMLSDKKFTCNYXXXXXX 332
F+M G+R+G E V+ A +SS S T Q+ L++++ + +
Sbjct: 236 FAMTGWRIGYACGPKE-VIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 333 XXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392
+ GL G++ ++ + + +D + AE+ + E G+ +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER------LLEAGVAV 348
Query: 393 SPGSSCHCNEPGWFRICFANITEETLQVALQR 424
PG+ G R+ +A +EE L+ AL+R
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALER 377
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 158/392 (40%), Gaps = 55/392 (14%)
Query: 57 LASNQEAVELKRNG--------------------ESLFRELALFQDYHGFPDAKKELVKL 96
+A N +A+EL+R G E+ R LA + + P EL +
Sbjct: 17 VAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREA 76
Query: 97 MARI--RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRP 154
+A R N + P + ++T G A L + DPGD ++ +PY+ + +++
Sbjct: 77 LAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG 136
Query: 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214
GV +V + GF + + + + + + K +++ +P+NP G + L L
Sbjct: 137 GV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEAL 189
Query: 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274
+ ++VSDEIY +++ E + L V +K
Sbjct: 190 ARLAVEHDFYLVSDEIYEHLLYEG---------EHFSPGRVAPEHTL-----TVNGAAKA 235
Query: 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT--QYLLSRMLSDKKFTCNYXXXXXX 332
F+M G+R+G E V+ A +SS S T Q+ L++++ + +
Sbjct: 236 FAMTGWRIGYACGPKE-VIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 333 XXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392
+ GL G++ ++ + + +D + AE+ + E G+ +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER------LLEAGVAV 348
Query: 393 SPGSSCHCNEPGWFRICFANITEETLQVALQR 424
PG+ G R+ +A +EE L+ AL+R
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALER 377
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 160/395 (40%), Gaps = 55/395 (13%)
Query: 54 ESWLASNQEAVELKRNG--------------------ESLFRELALFQDYHGFPDAKKEL 93
++ +A N +A+EL+R G E+ R LA + + P EL
Sbjct: 14 DAVVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPEL 73
Query: 94 VKLMARI--RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK 151
+ +A R N + P + ++T G + A L + DPGD ++ +PY+ + ++
Sbjct: 74 REALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVR 133
Query: 152 WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQEL 211
+ GV +V + GF + + + + + + K +++ +P+NP G + L
Sbjct: 134 FAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVL 186
Query: 212 NHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271
L + ++VSDEIY +++ E + L V
Sbjct: 187 EALARLAVEHDFYLVSDEIYEHLLYEG---------EHFSPGRVAPEHTL-----TVNGA 232
Query: 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT--QYLLSRMLSDKKFTCNYXXX 329
+K F+M G+R+G E V+ A +S S T Q+ L++++ + +
Sbjct: 233 AKAFAMTGWRIGYACGPKE-VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEM 291
Query: 330 XXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389
+ GL G++ ++ + + +D + AE+ + E G
Sbjct: 292 AREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER------LLEAG 345
Query: 390 LNISPGSSCHCNEPGWFRICFANITEETLQVALQR 424
+ + PG+ G R+ +A +EE L+ AL+R
Sbjct: 346 VAVVPGTDFAAF--GHVRLSYAT-SEENLRKALER 377
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 158/392 (40%), Gaps = 55/392 (14%)
Query: 57 LASNQEAVELKRNG--------------------ESLFRELALFQDYHGFPDAKKELVKL 96
+A N +A+EL+R G E+ R LA + + P EL +
Sbjct: 17 VAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREA 76
Query: 97 MARI--RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRP 154
+A R N + P + ++T G + A L + DPGD ++ +PY+ + +++
Sbjct: 77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG 136
Query: 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214
GV +V + GF + + + + + + K +++ +P+NP G + L L
Sbjct: 137 GV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEAL 189
Query: 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274
+ ++VSDEIY +++ E + L V +K
Sbjct: 190 ARLAVEHDFYLVSDEIYEHLLYEG---------EHFSPGRVAPEHTL-----TVNGAAKA 235
Query: 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT--QYLLSRMLSDKKFTCNYXXXXXX 332
F+M G+R+G E V+ A +S S T Q+ L++++ + +
Sbjct: 236 FAMTGWRIGYACGPKE-VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 333 XXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392
+ GL G++ ++ + + +D + AE+ + E G+ +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER------LLEAGVAV 348
Query: 393 SPGSSCHCNEPGWFRICFANITEETLQVALQR 424
PG+ G R+ +A +EE L+ AL+R
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALER 377
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 158/392 (40%), Gaps = 55/392 (14%)
Query: 57 LASNQEAVELKRNG--------------------ESLFRELALFQDYHGFPDAKKELVKL 96
+A N +A+EL+R G E+ R LA + + P EL +
Sbjct: 17 VAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREA 76
Query: 97 MARI--RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRP 154
+A R N + P + ++T G + A L + DPGD ++ +PY+ + +++
Sbjct: 77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG 136
Query: 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214
GV +V + GF + + + + + + K +++ +P+NP G + L L
Sbjct: 137 GV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEAL 189
Query: 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274
+ ++VSDEIY +++ E + L V +K
Sbjct: 190 ARLAVEHDFYLVSDEIYEHLLYEG---------EHFSPGRVAPEHTL-----TVNGAAKA 235
Query: 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT--QYLLSRMLSDKKFTCNYXXXXXX 332
F+M G+R+G E V+ A +S S T Q+ L++++ + +
Sbjct: 236 FAMTGWRIGYACGPKE-VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 333 XXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392
+ GL G++ ++ + + +D + AE+ + E G+ +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER------LLEAGVAV 348
Query: 393 SPGSSCHCNEPGWFRICFANITEETLQVALQR 424
PG+ G R+ +A +EE L+ AL+R
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALER 377
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 147/339 (43%), Gaps = 43/339 (12%)
Query: 92 ELVKLMARIRGNKVKFD--PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD 149
EL + ++ + +K K D P+ +++T GS+ + + D GD L+ P YP +
Sbjct: 70 ELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNF 129
Query: 150 LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQ 209
+++ + P+ C T+ +LE A L+ K K ++I +PSNPLG + +
Sbjct: 130 IRF---LGAKPVFCD------FTVESLEEA------LSDKTKAIIINSPSNPLGEVIDRE 174
Query: 210 ELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269
+ F+ +I+SDEIY+G V++ S I E D+ + ++
Sbjct: 175 ----IYEFAYENIPYIISDEIYNGLVYEGKCYSAI------------EFDENLEKTILIN 218
Query: 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYXXX 329
S ++M G+R+G + SN+E ++ A K+ +S+ T + + + +K T
Sbjct: 219 GFSXLYAMTGWRIGYVISNDE-IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINS 277
Query: 330 XXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389
+ +K G + + N E +E K++ E
Sbjct: 278 MIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVF--------PNIGEDGREFAYKLLKEKF 329
Query: 390 LNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428
+ ++PG + RI +AN + E ++ L+RIK F
Sbjct: 330 VALTPGIGFGSKGKNYIRISYAN-SYENIKEGLERIKEF 367
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 55/392 (14%)
Query: 57 LASNQEAVELKRNG--------------------ESLFRELALFQDYHGFPDAKKELVKL 96
+A N +A+EL+R G E+ R LA + + P EL +
Sbjct: 17 VAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREA 76
Query: 97 MARI--RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRP 154
+A R N + P + ++T G A L + DPGD ++ +PY+ + +++
Sbjct: 77 LAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG 136
Query: 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214
GV +V + GF + + + + + + K +++ +P+NP G + L L
Sbjct: 137 GV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEAL 189
Query: 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274
+ ++VSDEIY +++ E + L V +
Sbjct: 190 ARLAVEHDFYLVSDEIYEHLLYEG---------EHFSPGRVAPEHTL-----TVNGAAXA 235
Query: 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT--QYLLSRMLSDKKFTCNYXXXXXX 332
F+M G+R+G E V+ A +SS S T Q+ L++++ + +
Sbjct: 236 FAMTGWRIGYACGPKE-VIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMARE 294
Query: 333 XXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392
+ GL G++ ++ + + +D + AE+ + E G+ +
Sbjct: 295 AYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER------LLEAGVAV 348
Query: 393 SPGSSCHCNEPGWFRICFANITEETLQVALQR 424
PG+ G R+ +A +EE L+ AL+R
Sbjct: 349 VPGTDFAAF--GHVRLSYAT-SEENLRKALER 377
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 142/352 (40%), Gaps = 44/352 (12%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP 144
G P ++ + +L G V DP ++V+T GS+ L D GD + P YP
Sbjct: 69 GLPALRQRIARLYGEWYG--VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP 126
Query: 145 GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ--AQTLNLKVKGVLITNPSNPL 202
+ + L+ + +VP+ + A EN Q A L + G+ + +P+NP
Sbjct: 127 SYRQILR---ALGLVPVDLPT---------APENRLQPVPADFAGLDLAGLXVASPANPT 174
Query: 203 GTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262
GT + H LI ++++ +SDEIY G +++ + + + +L
Sbjct: 175 GTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL---------------ELT 219
Query: 263 SRIHIVYSLSKDFSMPGFRVG--MIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320
+++ S SK FS G+RVG ++ + RVV + + L+ + D
Sbjct: 220 DECYVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIAQNXFICAPHASQVAALAALDCDA 279
Query: 321 KFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKEL 380
+ N +G R + + + D VS+ + +
Sbjct: 280 ELQANLDVYKANRKLXLERLPKAGFT----RIAPPDGAFYVYAD-----VSDLTDDSRAF 330
Query: 381 WKKIIFEVGLNISPGSSCHCNE-PGWFRICFANITEETLQVALQRIKVFAQS 431
+I+ + G+ ++PG G R +A T + ++ L R++ F Q+
Sbjct: 331 AAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATAD-IEEGLDRLEAFXQA 381
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 145/337 (43%), Gaps = 45/337 (13%)
Query: 101 RGNKVKFDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLPTPYYPGFDRDLKWRPGVE 157
+ N ++ DP ++ AN+ + L+ G+ L+PTP + + + P V
Sbjct: 77 KQNGIEADPKTEIMVL--LGANQAFLMGLSAFLKDGEEVLIPTPAF------VSYAPAVI 128
Query: 158 I-----VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELN 212
+ V + + FR+ + L+ + + K + ++I +P NP G +T ++L
Sbjct: 129 LAGGKPVEVPTYEEDEFRLNVDELK------KYVTDKTRALIINSPCNPTGAVLTKKDLE 182
Query: 213 HLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272
+ +F + ++SDE+Y ++D I+ ++ + +R I V S
Sbjct: 183 EIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI-----------TVNGFS 231
Query: 273 KDFSMPGFRVGMIYSNN---ERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYXXX 329
K F+M G+R+G + + + ER+V +M + + QY ++ L D++ +
Sbjct: 232 KTFAMTGWRLGFVAAPSWIIERMVK--FQMYNATCPVTFIQYAAAKALKDER-SWKAVEE 288
Query: 330 XXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389
L G+ +K + + +R +T K+ + ++ E
Sbjct: 289 MRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIR-----DTGLTSKKFSELMLKEAR 343
Query: 390 LNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426
+ + PGS+ G+ RI +A E+ L+ A++R++
Sbjct: 344 VAVVPGSAFGKAGEGYVRISYATAYEK-LEEAMERME 379
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLP 139
+ D G P+ +K +V+ R N V P+ + +TA T A + + L DPGD L+P
Sbjct: 74 YGDSEGLPELRKAIVE--REKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVP 131
Query: 140 TPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPS 199
P YP + +K+ G + V ++ I + + + + K + + NP+
Sbjct: 132 GPSYPPYTGLVKFY-GGKPVEYRTIEEEDWQPDIDDIR------KKITDRTKAIAVINPN 184
Query: 200 NPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESD 259
NP G + L ++N + I ++SDEIY ++ S S+ + V
Sbjct: 185 NPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVP-------- 236
Query: 260 DLWSRIHIVYSLSKDFSMPGFRVGMIY 286
+ ++ LSK + G+R+G +Y
Sbjct: 237 -----VIVMNGLSKVYFATGWRLGYMY 258
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 132/343 (38%), Gaps = 53/343 (15%)
Query: 84 HGFPDAKK--ELVKLMARIRGNK--VKFDPNKLVLTAGSTAANETLMFCL----ADPGDA 135
HG+ A+ E +A N F+ + L T G+ A +L C +D D
Sbjct: 70 HGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAA---SLSICFRALTSDAYDE 126
Query: 136 FLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195
F+ PY+P + + G +V + + + F+I ALE + +N +GV+I
Sbjct: 127 FITIAPYFPEY-KVFVNAAGARLVEVPADTEH-FQIDFDALE------ERINAHTRGVII 178
Query: 196 TNPSNPLGTAMTHQELNHLINF--SKSKR----IHIVSDEIYSGTVFDSPSSSFISIMEA 249
+P+NP GT + + + L + KSK I I++DE Y V+D F++
Sbjct: 179 NSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT---- 234
Query: 250 VMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQT 309
+ + YS SK S+PG R+G + +E V A ++
Sbjct: 235 ----------KYYDNTLVCYSYSKSLSLPGERIGYVLVPDE-VYDKAELYAAVCGAGRAL 283
Query: 310 QYLLSRMLSDKKFT-CNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHL 368
Y+ + L K C GL G C K + + +V
Sbjct: 284 GYVCAPSLFQKXIVKCQGATGDINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFVKALE- 342
Query: 369 LVSNTF-EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF 410
SN F E KE +V + + G C PGW RI +
Sbjct: 343 DDSNAFCEKAKEE------DVLIVAADGFGC----PGWVRISY 375
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 144/337 (42%), Gaps = 45/337 (13%)
Query: 101 RGNKVKFDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLPTPYYPGFDRDLKWRPGVE 157
+ N ++ DP ++ AN+ + L+ G+ L+PTP + + + P V
Sbjct: 78 KQNGIEADPKTEIMVL--LGANQAFLMGLSAFLKDGEEVLIPTPAF------VSYAPAVI 129
Query: 158 I-----VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELN 212
+ V + + FR+ + L+ + + K + ++I +P NP G +T ++L
Sbjct: 130 LAGGKPVEVPTYEEDEFRLNVDELK------KYVTDKTRALIINSPCNPTGAVLTKKDLE 183
Query: 213 HLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272
+ +F + ++SDE+Y ++D I+ ++ + +R I V S
Sbjct: 184 EIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI-----------TVNGFS 232
Query: 273 KDFSMPGFRVGMIYSNN---ERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYXXX 329
K F+M G+R+G + + + ER+V +M + + QY ++ L D++ +
Sbjct: 233 KTFAMTGWRLGFVAAPSWIIERMVK--FQMYNATCPVTFIQYAAAKALKDER-SWKAVEE 289
Query: 330 XXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389
L G+ +K + + +R +T K+ + ++ E
Sbjct: 290 MRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIR-----DTGLTSKKFSELMLKEAR 344
Query: 390 LNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426
+ + PGS+ G+ RI +A E+ L+ A+ R++
Sbjct: 345 VAVVPGSAFGKAGEGYVRISYATAYEK-LEEAMDRME 380
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 101 RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160
R N + + + +++T G + LM + +PGD ++P P++ + +K G ++
Sbjct: 82 RDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI- 140
Query: 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS 220
+ + F+++ Q Q + K K ++ PSNP G T E+ + +
Sbjct: 141 LPTTVETQFKVSPE------QIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE 194
Query: 221 KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF 280
+ ++SDEIY ++D + +SI A S + + R + +K ++M G+
Sbjct: 195 AGLWVLSDEIYEKILYD--DAQHLSIGAA--------SPEAYERSVVCSGFAKTYAMTGW 244
Query: 281 RVGMIYSNNERVVSAATKM 299
RVG + + +V AATK+
Sbjct: 245 RVGFL-AGPVPLVKAATKI 262
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 138/350 (39%), Gaps = 44/350 (12%)
Query: 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPT 140
QD + P L + +A + +P +V+T+G+T A L+ L PGD ++
Sbjct: 54 QDQYAPPAGLPALREALA----EEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLE 109
Query: 141 PYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVKGVLITNPS 199
P++ + D + G + + + GFR+ +SALE A L + + +L+ P
Sbjct: 110 PFFDVYLPD-AFLAGAKARLVRLDLTPEGFRLDLSALEKA------LTPRTRALLLNTPM 162
Query: 200 NPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESD 259
NP G +EL + +++ + ++SDE+Y + R + E
Sbjct: 163 NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGE------------RPRRLREFA 210
Query: 260 DLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV--VSAATKMSSFGLVSSQTQYLLSRML 317
R V S K G+RVG I E + ++ + +SF + Q ++ L
Sbjct: 211 P--ERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFS-APTPLQAGVAEAL 267
Query: 318 SDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAE 377
+ Y GL+ G+R F M L + F
Sbjct: 268 KLARREGFY-EALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFL---MAELPGWDAF--- 320
Query: 378 KELWKKIIFEVGLNISPGSSCHCNEP--GWFRICFANITEETLQVALQRI 425
+++ E + + P S+ + +P FR F TEE L +AL+R+
Sbjct: 321 -----RLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERL 364
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 16/202 (7%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTA-GSTAANETLMFCLADPGDAFLLPTPYY 143
G P K L L +I ++ DPN+ +L A G+ + + L DPGD ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQI--DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY 119
Query: 144 PGFDRDLKWRPGVEI-VPIHCSSSNGFRITISALENAYQQAQT-LNLKVKGVLITNPSNP 201
++ ++ V + +P+ ++G + T S ++ ++ + K K +++ P NP
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 202 LGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261
LG T QEL + + +SDE+Y V+ + I+ + +
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG-----------M 228
Query: 262 WSRIHIVYSLSKDFSMPGFRVG 283
W R + S K FS+ G+++G
Sbjct: 229 WERTITIGSAGKTFSVTGWKLG 250
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY 143
G P KK + +L ++ P +++ T G+T AN +++ L +PGD + P Y
Sbjct: 63 EGSPAFKKSVSQLYTGVK-------PEQILQTNGATGANLLVLYSLIEPGDHVISLYPTY 115
Query: 144 PGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLG 203
D+ G E+ NG+ + L Q + K + I N +NP G
Sbjct: 116 QQL-YDIPKSLGAEVDLWQIEEENGWLPDLEKLR------QLIRPTTKXICINNANNPTG 168
Query: 204 TAMTHQELNHLINFSKSKRIHIVSDEIY-SGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262
L L+ + +I+SDE+Y S + D P SI+E V D+ I
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVYRSFSELDVP-----SIIE-VYDKGI------- 215
Query: 263 SRIHIVYSLSKDFSMPGFRVGMIYSNNE 290
V SLS +S+PG R+G + +N++
Sbjct: 216 ----AVNSLSXTYSLPGIRIGWVAANHQ 239
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTA-GSTAANETLMFCLADPGDAFLLPTPYY 143
G P K L L +I ++ DPN+ +L A G+ + + L DPGD ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQI--DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY 119
Query: 144 PGFDRDLKWRPGVEI-VPIHCSSSNGFRITISALENAYQQAQT-LNLKVKGVLITNPSNP 201
++ ++ V + +P+ ++G + T S ++ ++ + K K +++ P NP
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 202 LGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261
LG T QEL + + +SDE+Y V+ + I+ + +
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG-----------M 228
Query: 262 WSRIHIVYSLSKDFSMPGFRVG 283
W R + S FS+ G+++G
Sbjct: 229 WERTITIGSAGXTFSVTGWKLG 250
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDP-NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY 143
G P + L KL +++ + +P ++++T G+ A + D GD ++ P++
Sbjct: 78 GHPRLVQALSKLYSQLVDRTI--NPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFF 135
Query: 144 PGFDRDLKWRPGV-EIVPIHCSSSNGFRITISA----LENAYQQAQTLNLKVKGVLITNP 198
++ +K G+ +P+ + + G TIS+ L+N +A N K K ++I P
Sbjct: 136 DCYEPMVKAAGGIPRFIPLKPNKTGG---TISSADWVLDNNELEA-LFNEKTKMIIINTP 191
Query: 199 SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDES 258
NPLG M EL + N K + VSDE+Y VF+ I +
Sbjct: 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG--------- 242
Query: 259 DDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287
+W R + S K FS+ G+++G Y
Sbjct: 243 --MWERTITIGSAGKTFSLTGWKIGWAYG 269
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 118/262 (45%), Gaps = 41/262 (15%)
Query: 34 NPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESL-FRELALFQDYHGFPDAKKE 92
+P II++ + + L +LL S A ++K+ E++ +E + G P+A++
Sbjct: 31 SPKPIIKLSVGDPTLDKNLLTS-------AAQIKKLKEAIDSQECNGYFPTVGSPEAREA 83
Query: 93 LVKL-------MARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG 145
+ ++ VK + +VL +G + + + D GD L+P P +P
Sbjct: 84 VATWWRNSFVHKEELKSTIVK---DNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPH 140
Query: 146 FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA 205
++ K G+ + +C N + + + K K +++TNPSNP G+
Sbjct: 141 YETVCKAY-GIGMHFYNCRPENDWEADLDEIRRLKDD------KTKLLIVTNPSNPCGSN 193
Query: 206 MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS--PSSSFISI--MEAVMDRNIDESDDL 261
+ + + ++ ++ R+ + SDEIY+G VF P+++F S+ E + R
Sbjct: 194 FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRV------- 246
Query: 262 WSRIHIVYSLSKDFSMPGFRVG 283
I+ + + +PG+R+G
Sbjct: 247 -----ILGGTAXNLVVPGWRLG 263
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 145/343 (42%), Gaps = 49/343 (14%)
Query: 104 KVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163
+ + ++LT+G + A E + LA+PG L+P P + + R L G+E+ +
Sbjct: 90 EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLY-RTLAESMGIEVKLYNL 148
Query: 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223
+ I + LE+ + K +++ NPSNP G+ + + L ++ ++ + +
Sbjct: 149 LPEKSWEIDLKQLESLIDE------KTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCV 202
Query: 224 HIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY--SLSKDFSMPGFR 281
I++DEIY VF D + L + + I+ L+ + +PG+R
Sbjct: 203 PILADEIYGDMVFS--------------DCKYEPMATLSTNVPILSCGGLAXRWLVPGWR 248
Query: 282 VGMIYSNNER------VVSAATKMSS-----FGLVSSQTQYLLSRMLSDKKFTCNYXXXX 330
+G I ++ R + K+S +V + +L R + ++F Y
Sbjct: 249 LGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILQR--TPQEF---YQDTL 303
Query: 331 XXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWV--DMRHLLVSNTFEAEKELWKKIIFEV 388
+ + G++ ++ + ++ V +M H FE + E +++I E
Sbjct: 304 SFLKSNADLCYGALSAIPGLQPVRPSGAMYLMVGIEMEHF---PEFENDVEFTERLIAEQ 360
Query: 389 GLNISPGSSCHCNE-PGWFRICFANITEETLQVALQRIKVFAQ 430
++ P + C E P +FR+ + E + A RI+ F +
Sbjct: 361 SVHCLPAT---CFEYPNFFRVVI-TVPEVMMLEACSRIQEFCE 399
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDP-NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY 143
G P + L KL +++ + +P ++++T G+ A + D GD ++ P++
Sbjct: 78 GHPRLVQALSKLYSQLVDRTI--NPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFF 135
Query: 144 PGFDRDLKWRPGV-EIVPIHCSSSNGFRITISA----LENAYQQAQTLNLKVKGVLITNP 198
++ +K G+ +P+ + + G TIS+ L+N +A N K K ++I P
Sbjct: 136 DCYEPMVKAAGGIPRFIPLKPNKTGG---TISSADWVLDNNELEA-LFNEKTKMIIINTP 191
Query: 199 SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDES 258
NPLG M EL + N K + VSDE+Y VF+ I +
Sbjct: 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG--------- 242
Query: 259 DDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287
+W R + S FS+ G+++G Y
Sbjct: 243 --MWERTITIGSAGXTFSLTGWKIGWAYG 269
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLM-FCLADPGDAFLLP 139
Q HG DA + +A G D + LT G++ +M + + D L+P
Sbjct: 134 QGIHGLRDA---IASGIASRDGFPANAD--DIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 140 TPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPS 199
P YP + + G +VP + + S G+ + S ++ + A++ + V+ +++ NP
Sbjct: 189 IPQYPLYSASIALHGGA-LVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247
Query: 200 NPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236
NP G + + ++ F K++ + +++DE+Y ++
Sbjct: 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIY 284
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLPT 140
G P L+KL + I ++K + N V +T ANE ++ CL + GD ++
Sbjct: 95 RGRPSLINSLIKLYSPIYNTELKAE-NVTV----TTGANEGILSCLMGLLNAGDEVIVFE 149
Query: 141 PYYPGFDRDLKWRPG-VEIVPIHCS------SSNGFRITISALENAYQQAQTLNLKVKGV 193
P++ + +++ G V VPI+ ++ G TI + Q + + K K V
Sbjct: 150 PFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTI----DFEQFEKAITSKTKAV 205
Query: 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDR 253
+I P NP+G T +EL L N + I+SDE+Y F + SF I
Sbjct: 206 IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYF---TDSFTRIATL---- 258
Query: 254 NIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK 298
S ++ V S F+ G+R+G + S N ++S A K
Sbjct: 259 ----SPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELLSYAAK 299
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 50/305 (16%)
Query: 105 VKFDP-NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP----------GFDRDLKWR 153
V+ DP ++ ++T GS LM D GD L+P P YP R +
Sbjct: 94 VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLV 153
Query: 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNH 213
PG++ + LE A +++ K + +++ PSNP +
Sbjct: 154 PGIDF--------------FNELERAIRESIP---KPRMMILGFPSNPTAQCVELDFFER 196
Query: 214 LINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273
++ +K + +V D Y+ V+D + I + D ++ ++LSK
Sbjct: 197 VVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVE-----------FFTLSK 245
Query: 274 DFSMPGFRVGMIYSNNERVVSAATKMSS---FGLVSSQTQYLLSRMLSDKKFTCNYXXXX 330
++M G+R+G + N E +VSA ++ S +G + ++ + D++ +
Sbjct: 246 SYNMAGWRIGFMVGNPE-LVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRD----I 300
Query: 331 XXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGL 390
V GL+ AG A ++ W + E KK++ + +
Sbjct: 301 ARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPE---PYAHLGSLEFAKKLLQDAKV 357
Query: 391 NISPG 395
++SPG
Sbjct: 358 SVSPG 362
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 143/343 (41%), Gaps = 49/343 (14%)
Query: 104 KVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163
+ + ++LT+G + A + + LA+PG L+P P + + + L G+E+ +
Sbjct: 113 EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLY-KTLAESMGIEVKLYNL 171
Query: 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223
+ I + LE ++ K +++ NPSNP G+ + + L ++ + + +
Sbjct: 172 LPEKSWEIDLKQLE------YLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCV 225
Query: 224 HIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY--SLSKDFSMPGFR 281
I++DEIY VF D + L + + I+ L+K + +PG+R
Sbjct: 226 PILADEIYGDMVFS--------------DCKYEPLATLSTDVPILSCGGLAKRWLVPGWR 271
Query: 282 VGMIYSNNER------VVSAATKMSS-----FGLVSSQTQYLLSRMLSDKKFTCNYXXXX 330
+G I ++ R + K+S +V + +L R + +F N
Sbjct: 272 LGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCR--TPGEFYHNTLSFL 329
Query: 331 XXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWV--DMRHLLVSNTFEAEKELWKKIIFEV 388
+ + G+R ++ + ++ V +M H FE + E ++++ E
Sbjct: 330 KSNADLCYGALAA---IPGLRPVRPSGAMYLMVGIEMEHF---PEFENDVEFTERLVAEQ 383
Query: 389 GLNISPGSSCHCNE-PGWFRICFANITEETLQVALQRIKVFAQ 430
++ P + C E P + R+ + E + A RI+ F +
Sbjct: 384 SVHCLPAT---CFEYPNFIRVVI-TVPEVMMLEACSRIQEFCE 422
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 10/190 (5%)
Query: 101 RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGD----AFLLPTPYYPGFDRDLKWRPGV 156
R V DP+ + LT G++ T++ L G ++P P YP + + +
Sbjct: 145 RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAI 204
Query: 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLIN 216
+ V + N + + ++ L A Q+A+ + K + I NP NP G + + + +I+
Sbjct: 205 Q-VNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIH 262
Query: 217 FSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF- 275
F+ +++ +++DE+Y V+ SP F S + + + + S ++ + +S SK +
Sbjct: 263 FAWEEKLFLLADEVYQDNVY-SPDCRFHSFKKVLYEMGPEYSSNV--ELASFHSTSKGYM 319
Query: 276 SMPGFRVGMI 285
G+R G +
Sbjct: 320 GECGYRGGYM 329
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 45 ENQLSFDLLESWLASNQEAV--ELKRNGESLFRELALFQDYHGFPDAKKELVK--LMARI 100
E + LL +W+A V E+K+ +L +G+ A EL++ L
Sbjct: 26 ETETDPQLLPAWIADMDFEVMPEVKQAIHDYAEQLV-----YGYTYASDELLQAVLDWEK 80
Query: 101 RGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160
++ FD +V G A + G+A L+ +P YP F R ++ ++V
Sbjct: 81 SEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN-NRKLVS 139
Query: 161 IHCSSSNG-FRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSK 219
NG F+I LEN + VK L+ NP NP G + L + + +
Sbjct: 140 NSLKEENGLFQIDFEQLEN-----DIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQ 194
Query: 220 SKRIHIVSDEIYSG-TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP 278
+ +VSDEI+ T+F SF ++ S D ++ S +K F++
Sbjct: 195 KHHVILVSDEIHQDLTLFGHEHVSFNTV-----------SPDFKDFALVLSSATKTFNIA 243
Query: 279 GFRVGMIYSNN---------ERVVSAATKMSSFGLVSSQTQY 311
G + N +++V+ ++SS G ++++T Y
Sbjct: 244 GTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAY 285
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 118/307 (38%), Gaps = 39/307 (12%)
Query: 128 CLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187
C+ +PGD LLP P Y + + G + VP++ + L + + +
Sbjct: 128 CVINPGDYVLLPDPGYTDYLAGVLLADG-KPVPLNLEPPH-------YLPDWSKVDSQII 179
Query: 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIM 247
K K + +T P+NP G+ T + + I K IV D Y FD+ + S ++
Sbjct: 180 DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILA-S 238
Query: 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS-----AATKMSSF 302
E D I+ +YSLSK ++ GFRVG N + + + T F
Sbjct: 239 ENGKDVAIE-----------IYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAGXF 287
Query: 303 GLVSSQTQYLLSRMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCW 362
G + Y L+ ++ + L A + + + G++ W
Sbjct: 288 GALQDAAIYALNHY-------DDFLEEQSNVFKTRRDRFEAXLAKADLPFVHAKGGIYVW 340
Query: 363 VDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVAL 422
++ S FE + ++ E + ++PG N + RI A + ++ L A
Sbjct: 341 LETPPGYDSEQFE------QFLVQEKSILVAPGKPFGENGNRYVRISLA-LDDQKLDEAA 393
Query: 423 QRIKVFA 429
R+ A
Sbjct: 394 IRLTELA 400
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 29/211 (13%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVL-TAGSTAANETLMFCLADPGDAFLLPTPYY 143
G+P K L + G ++ DP + VL T G A T L D GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 144 PGFDRDLKWRPGVEIV------PIH---CSSSNGFRITISALENAYQQAQTLNLKVKGVL 194
++ G + PI SS+ +++ + + A + K ++
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQL------DPMELAGKFTSRTKALV 179
Query: 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRN 254
+ P+NPLG + +EL + + + + ++DE+Y V+D I+ +
Sbjct: 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG----- 234
Query: 255 IDESDDLWSRIHIVYSLSKDFSMPGFRVGMI 285
+W R + S K FS G++VG +
Sbjct: 235 ------MWERTLTIGSAGKTFSATGWKVGWV 259
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 56 WLASNQ--EAVELKRNGESLFRELALFQDYHGFPDAK-KELVKLMARIRGNKVKFDPNKL 112
WL +N+ AVE + ++L R +P+ + K +++ A+ G K P ++
Sbjct: 33 WLNANEYPTAVEFQLTQQTLNR----------YPECQPKAVIENYAQYAGVK----PEQV 78
Query: 113 VLTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRI 171
+++ G+ E L+ +PG DA L P Y + E + + C
Sbjct: 79 LVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVS------AETIGVECR------- 125
Query: 172 TISALENAYQQAQTLNLKVKGV---LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD 228
T+ L+N Q ++ K+ GV + +P+NP G + Q+ L+ ++ K I +V+D
Sbjct: 126 TVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVAD 184
Query: 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288
E Y + P +S + + + I+ +LSK F++ G R G +N
Sbjct: 185 EAY---IEFCPQASLAGWLAE------------YPHLAILRTLSKAFALAGLRCGFTLAN 229
Query: 289 NERV 292
E +
Sbjct: 230 EEVI 233
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 56 WLASNQ--EAVELKRNGESLFRELALFQDYHGFPDAK-KELVKLMARIRGNKVKFDPNKL 112
WL +N+ AVE + ++L R +P+ + K +++ A+ G K P ++
Sbjct: 33 WLNANEYPTAVEFQLTQQTLNR----------YPECQPKAVIENYAQYAGVK----PEQV 78
Query: 113 VLTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRI 171
+++ G+ E L+ +PG DA L P Y + E + + C
Sbjct: 79 LVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVS------AETIGVECR------- 125
Query: 172 TISALENAYQQAQTLNLKVKGV---LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD 228
T+ L+N Q ++ K+ GV + +P+NP G + Q+ L+ ++ K I +V+D
Sbjct: 126 TVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVAD 184
Query: 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288
E Y + P +S + + + I+ +LSK F++ G R G +N
Sbjct: 185 EAY---IEFCPQASLAGWLAE------------YPHLAILRTLSKAFALAGLRCGFTLAN 229
Query: 289 NERV 292
E +
Sbjct: 230 EEVI 233
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLL 138
++ +G P+ ++EL + + + ++ P +V+T G T A + L L DPGD +
Sbjct: 70 MYTPANGIPELREELAAFLKKY--DHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVIT 127
Query: 139 PTPYYP----GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194
P Y F++ +E VP+ ++G R+ + LE ++ + KVK ++
Sbjct: 128 ENPSYINTLLAFEQ---LGAKIEGVPV---DNDGMRVDL--LEEKIKELKAKGQKVK-LI 178
Query: 195 ITNPS--NPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252
T P+ NP+G M+ + L+ + + I+ D Y+ F I ++A+
Sbjct: 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYN---FMRYEGGDIVPLKAL-- 233
Query: 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE 290
D R+ + +LSK GFR+G I + E
Sbjct: 234 -------DNEGRVIVAGTLSKVLGT-GFRIGWIIAEGE 263
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 105 VKFDPNKLVL-TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW----RPGVEIV 159
V +DP VL T G+T A + L +PG LL P+Y + + R V +V
Sbjct: 81 VDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140
Query: 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSK 219
P GF + AL A + + + ++I +P NP G ++ EL + +
Sbjct: 141 P----DGRGFALDADALRRA------VTPRTRALIINSPHNPTGAVLSATELAAIAEIAV 190
Query: 220 SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255
+ + +++DE+Y VFD ++ + + +R I
Sbjct: 191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTI 226
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 36/234 (15%)
Query: 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRI 171
+V +AG A T + ++ L+ P YP F + V ++ + I
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI 144
Query: 172 TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231
LE +QQ VK L+ +P NP+G +EL L + + +V+DEI+
Sbjct: 145 DFEHLEKQFQQG------VKLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIH 198
Query: 232 SGTVF-DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE 290
S ++ D + F S+ E + R I + S F++ G + +I NE
Sbjct: 199 SDIIYADHTHTPFASLSEELAARTI-----------TCXAPSXTFNIAGLQASIIIIPNE 247
Query: 291 RVVSAATK---------MSSFGLVSSQTQY---------LLSRMLSDKKFTCNY 326
++ A T ++ F + Q+ Y + + + KF C Y
Sbjct: 248 KLRQAFTSIQYRQGFHGLNIFAYTAXQSAYTECNDWLNEIRFYIEDNAKFACEY 301
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVL-TAGSTAANETLMFCLADPGDAFLLPTPYY 143
G+P K L + G ++ DP + VL T G A T L D GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 144 PGFDRDLKWRPGVEIV------PIH---CSSSNGFRITISALENAYQQAQTLNLKVKGVL 194
++ G + PI SS+ +++ + + A + K ++
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQL------DPMELAGKFTSRTKALV 179
Query: 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRN 254
+ P+NPLG + +EL + + + + ++DE+Y V+D I+ +
Sbjct: 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG----- 234
Query: 255 IDESDDLWSRIHIVYSLSKDFSMPGFRVGMI 285
+W R + S FS G++VG +
Sbjct: 235 ------MWERTLTIGSAGXTFSATGWKVGWV 259
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVL-TAGSTAANETLMFCLADPGDAFLLPTPYY 143
G+P K L + G ++ DP + VL T G A T L D GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 144 PGFDRDLKWRPGVEIV------PIH---CSSSNGFRITISALENAYQQAQTLNLKVKGVL 194
++ G + PI SS+ +++ + + A + K ++
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQL------DPMELAGKFTSRTKALV 179
Query: 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRN 254
+ P+NPLG + +EL + + + + ++DE+Y V+D I+ +
Sbjct: 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG----- 234
Query: 255 IDESDDLWSRIHIVYSLSKDFSMPGFRVGMI 285
+W R + S FS G++VG +
Sbjct: 235 ------MWERTLTIGSAGXTFSATGWKVGWV 259
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEA 249
V V+I NP+NP G + ++ H++ ++ K+ I+ DE + D PSSSF+ ++
Sbjct: 145 VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKN 203
Query: 250 VMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS 294
+S + I+ +++K F+MPG R G +NN+ + +
Sbjct: 204 ------------YSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAA 236
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 28/190 (14%)
Query: 105 VKFDPNKLVLT-AGSTAANETLMFCLADPGDAFLLPTPYYP---GFDRDLKWRPGVEIVP 160
V DP + L GS L+ L +P D LLP YP G R R ++P
Sbjct: 82 VGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLR--TFLIP 139
Query: 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS 220
+ +G + E +++A+ L L+ P+NP G + ++
Sbjct: 140 LR---EDGLADLKAVPEGVWREAKVL-------LLNYPNNPTGAVADWGYFEEALGLARK 189
Query: 221 KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF 280
+ ++ D Y V++ + S +++ A R+ ++SLSK +++ GF
Sbjct: 190 HGLWLIHDNPYVDQVYEGEAPSPLALPGAK------------ERVVELFSLSKSYNLAGF 237
Query: 281 RVGMIYSNNE 290
R+G + E
Sbjct: 238 RLGFALGSEE 247
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 138/349 (39%), Gaps = 37/349 (10%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP 144
GF ++ L+K + + G + D N +++T+GS A + + +PGD ++ P Y
Sbjct: 119 GFTPLRETLMKWLGKRYG--ISQD-NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYL 175
Query: 145 GFDRDLK-WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPS--NP 201
+ + P +P+ G ++ I LE ++ ++ KVK V+ T P+ NP
Sbjct: 176 AALQAFNFYEPQYIQIPL---DDEGMKVEI--LEEKLKELKSQGKKVK-VVYTVPTFQNP 229
Query: 202 LGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261
G M +L+ + +V D+ Y + I + D
Sbjct: 230 AGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL------------DN 277
Query: 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKK 321
R+ + + SK + PGFR+G + + + S L ++ +++ D
Sbjct: 278 EGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGG 336
Query: 322 FTCNYXXXXXXXXXXXXXXXVSGLK---VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEK 378
+ + + L+ G++ K G+F WV + + +++K
Sbjct: 337 YLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTL-----PDGIDSKK 391
Query: 379 ELWKKIIFEVGLNISPGSS--CHCNEPGWFRICFANITEETLQVALQRI 425
L + I + G+ PG + H + R+ F + E+ + ++R+
Sbjct: 392 MLERAI--KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 438
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 159 VPIHCSSSNGFRITISALENAYQQAQTLNLK---VKGVLITNPSNPLGTAMTHQELNHLI 215
VPIH NG++ Y A+ LK VK NPSNP M + L+ +
Sbjct: 220 VPIHADPDNGWQ---------YSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVR 270
Query: 216 NFSKSKR--IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273
+R + I++D++Y GT D S F +V RN +VYS SK
Sbjct: 271 AIVAEQRPDLLILTDDVY-GTFADEFQSLF-----SVCPRNT----------LLVYSFSK 314
Query: 274 DFSMPGFRVGMIYSNNERVVSAA 296
F G+R+G+I ++ + V A
Sbjct: 315 YFGATGWRLGVIAAHKDNVFDHA 337
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 138/350 (39%), Gaps = 37/350 (10%)
Query: 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY 143
GF ++ L+K + + G + D N +++T+GS A + + +PGD ++ P Y
Sbjct: 73 KGFTPLRETLMKWLGKRYG--ISQD-NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY 129
Query: 144 PGFDRDLK-WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPS--N 200
+ + P +P+ G ++ I LE ++ ++ KVK V+ T P+ N
Sbjct: 130 LAALQAFNFYEPQYIQIPL---DDEGMKVEI--LEEKLKELKSQGKKVK-VVYTVPTFQN 183
Query: 201 PLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260
P G M +L+ + +V D+ Y + I + D
Sbjct: 184 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL------------D 231
Query: 261 LWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320
R+ + + SK + PGFR+G + + + S L ++ +++ D
Sbjct: 232 NEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDG 290
Query: 321 KFTCNYXXXXXXXXXXXXXXXVSGLK---VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAE 377
+ + + L+ G++ K G+F WV + + +++
Sbjct: 291 GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTL-----PDGIDSK 345
Query: 378 KELWKKIIFEVGLNISPGSS--CHCNEPGWFRICFANITEETLQVALQRI 425
K L + I + G+ PG + H + R+ F + E+ + ++R+
Sbjct: 346 KMLERAI--KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 393
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 101 RGNKVKFDPNKLVLTAGSTAA----NETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGV 156
R K++ N+L+ T GS ++F +P A+ P P+Y ++ K+
Sbjct: 74 RRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAY--PNPFYQIYEGAAKFIKAK 131
Query: 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLIN 216
++ + N F +++ ++ Q ++L V++ +P+NP G ++ +EL +
Sbjct: 132 SLL-XPLTKENDFTPSLNE-----KELQEVDL----VILNSPNNPTGRTLSLEELISWVK 181
Query: 217 FSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS 276
+ +++DE YS ++P S++EA ++ + + +++SLSK S
Sbjct: 182 LALKHDFILINDECYSEIYENTPPP---SLLEACX----LAGNEAFKNVLVIHSLSKRSS 234
Query: 277 MPGFRVGMI 285
PG R G I
Sbjct: 235 APGLRSGFI 243
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 79 LFQDYHGF---PDAKKE-LVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGD 134
L Q+ +G+ PD+ E +V + R K+K + L+ + G A L+ L D
Sbjct: 58 LEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSE--WLIYSPGVIPAISLLINELTKAND 115
Query: 135 AFLLPTPYYPGFDRDLKWRPGVEIV-PIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193
++ P Y F+ +K I+ P+ + + + +EN + VK
Sbjct: 116 KIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-------VKLF 168
Query: 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236
++ NP NP+G T EL L + + I+SDEI+S +
Sbjct: 169 ILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIIL 211
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 140/355 (39%), Gaps = 39/355 (10%)
Query: 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY 143
G P K++++KL+ R G D + L+ T GS A + + D +L P Y
Sbjct: 85 EGDPVLKQQILKLLERXYGI-TGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAY 143
Query: 144 PG-FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV----LITNP 198
G + ++ +VP+ + ++ LE + N K+K V +++N
Sbjct: 144 LGAINAFRQYLANFVVVPLEDDGXD-----LNVLERKLSEFDK-NGKIKQVKFIYVVSNF 197
Query: 199 SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDES 258
NP G + ++ L+ ++ + IV D+ Y ++ + I +
Sbjct: 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGP-------- 249
Query: 259 DDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLS 318
R+ ++ + SK + PG R+G + + E + S L S + L+
Sbjct: 250 ----ERVVLLNTFSKVLA-PGLRIGXVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYL 304
Query: 319 DKKFTCNYXXXXXXXXXXXXXXXVSGLK-----VAGIRCLKSNAGLFCWVDMRHLLVSNT 373
++ ++ L+ + G++ +KS GLF W+ + +T
Sbjct: 305 ERYDLLEQLKPTIELYRRKRTVXLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF--DT 362
Query: 374 FEAEKELWKKIIFEVGLNISPGSSCHC-NEPG-WFRICFANITEETLQVALQRIK 426
+E + +K +F V PG +EP R+ F +E + ++R++
Sbjct: 363 WEXFEYAKRKKVFYV-----PGRVFKVYDEPSPSXRLSFCLPPDEKIVEGIKRLR 412
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 112 LVLTAGSTAANETLMFCLAD-----PGDAFLLPTPYYPGFDR--DLKWRPGVEIVPIHCS 164
L T G TAA LA+ GD + P + + R +LK VE V +H
Sbjct: 167 LFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVE-VDLHSY 225
Query: 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLIN-FSKSKRI 223
N + I + +E + +K +++ NP+NP LN + K+ ++
Sbjct: 226 EKNDWEIEPNEIEKLKDPS------IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKL 279
Query: 224 HIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVG 283
I+SDE+Y V +F SI V +VYS S F G+R+G
Sbjct: 280 XIISDEVYGAFV-----PNFKSIYSVVP-----------YNTXLVYSYSXLFGCTGWRLG 323
Query: 284 MIYSNNERV 292
+I N + V
Sbjct: 324 VIALNEKNV 332
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 137 LLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT 196
++PTP YP F L + G I + N + + + +L+
Sbjct: 109 IVPTPAYPPFFHLLS-----------ATQREGIFIDATGGINLHDVEKGFQAGARSILLC 157
Query: 197 NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238
NP NPLG + LN L + + ++ DEI++ VFD
Sbjct: 158 NPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG 199
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 135 AFLLP-TPYYPGF-DRDLKWRPGVEIVP----IHCSSSNGF---RITISALENAYQQAQT 185
+ LLP TP Y G+ D ++ + ++P + GF R+ ALEN +
Sbjct: 146 SILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG 205
Query: 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245
++ + + P+NP G +T +E HL +K I ++ D Y F +
Sbjct: 206 ---RIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY--------GXPFPN 254
Query: 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS 301
I+ + N D + L +SLSK +PG R G+I + + +V+ A + ++
Sbjct: 255 IIYSDAHLNWDNNTIL------CFSLSK-IGLPGXRTGIIVA-DAKVIEAVSAXNA 302
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 126/348 (36%), Gaps = 37/348 (10%)
Query: 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP 144
G ++ + + R+ G + D + + +TAG+T A + L GD + P Y
Sbjct: 68 GVQALREAIAQKTERLYGYQPDAD-SDITVTAGATEALYAAITALVRNGDEVICFDPSYD 126
Query: 145 GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGT 204
+ + G IV FR+ A L+ + + V++ P NP T
Sbjct: 127 SYAPAIALSGG--IVKRMALQPPHFRVDWQEF------AALLSERTRLVILNTPHNPSAT 178
Query: 205 AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264
+ L I ++SDE+Y F + + + +R +
Sbjct: 179 VWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAV--------- 229
Query: 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGL---VSSQTQYLLSRMLSDKK 321
V S K + M G++VG Y +SA + L V++ Q L+ ML +
Sbjct: 230 --AVSSFGKTYHMTGWKVG--YCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEP 285
Query: 322 FTCNYXXXXXXXXXXXXXXXVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELW 381
+ V+ L + + L F VD + VS + E W
Sbjct: 286 ---EHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVD--YSAVSTLDDVEFCQW 340
Query: 382 KKIIFEVGLNISPGSSCHCNEP---GWFRICFANITEETLQVALQRIK 426
+ E G+ P S C +P R+CFA E TL A +R++
Sbjct: 341 --LTQEHGVAAIP-LSVFCADPFPHKLIRLCFAK-KESTLLAAAERLR 384
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252
+ ++ P+NP G +T +EL L + I +V D Y G F P F
Sbjct: 184 ICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY-GVPF--PGIIF--------- 231
Query: 253 RNIDESDDLWS-RIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA 296
E+ LW+ I + SLSK +PG R G+I +N++ + + A
Sbjct: 232 ---SEARPLWNPNIILCXSLSK-LGLPGSRCGIIIANDKTITAIA 272
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 23/133 (17%)
Query: 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRIT 172
V +G A + PGD L+ P Y F NG R+
Sbjct: 89 VFASGVVPAISAXVRQFTSPGDQILVQEPVYNXF--------------YSVIEGNGRRVI 134
Query: 173 ISAL--ENAYQQAQTLNLK-------VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223
S L EN+ +L+ V+ + NP NP+G A + +E+ + ++
Sbjct: 135 SSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQV 194
Query: 224 HIVSDEIYSGTVF 236
++SDEI+ V
Sbjct: 195 LLISDEIHGDLVL 207
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 157/394 (39%), Gaps = 55/394 (13%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXK 123
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS----NGFRITISALENAY 180
+ + +PGD LL P Y G + L G I+ + S + R +S +
Sbjct: 124 VFEMIINPGDNVLLDEPAYSGTLQSLHPL-GCNIINVASDESGIVPDSLRDILSRWKPED 182
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240
+ N + N +NP G ++T + + ++ I+ D+ Y F+S
Sbjct: 183 AKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGR 242
Query: 241 -SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSAA 296
+F+S+ D+ R+ S SK S G R+G + ERV+
Sbjct: 243 VPTFLSM-------------DVDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVI-LH 287
Query: 297 TKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLKV 347
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 288 IQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAE 346
Query: 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG--- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 347 WHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP 396
Query: 405 WFRICFANITEETLQVALQRIKVFAQSCNPQMLL 438
+ R F++ + E + VA Q V AQ +L+
Sbjct: 397 YLRASFSSASPEQMDVAFQ---VLAQLIKESLLV 427
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKR--IHIVSDEIYSGTVFDSPSSSFISIM 247
+K NPSNP M + L + N R + I++D++Y GT D S F
Sbjct: 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY-GTFADDFQSLFAICP 304
Query: 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA 296
E + +VYS SK F G+R+G++ ++ + V A
Sbjct: 305 ENTL---------------LVYSFSKYFGATGWRLGVVAAHQQNVFDLA 338
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKR--IHIVSDEIYSGTVFDSPSSSFISIM 247
+K NPSNP M + L + N R + I++D++Y GT D S F
Sbjct: 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY-GTFADDFQSLFAICP 304
Query: 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA 296
E + +VYS SK F G+R+G++ ++ + V A
Sbjct: 305 ENTL---------------LVYSFSKYFGATGWRLGVVAAHQQNVFDLA 338
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 137 LLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT 196
++ TP + + R L + G EI ++G+++T + LE L + + +
Sbjct: 102 MIVTPGFAEYGRALA-QSGCEIRRWSLREADGWQLTDAILE-------ALTPDLDCLFLC 153
Query: 197 NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNID 256
P+NP G L + + KS I+++ DE + F + FI ++
Sbjct: 154 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFID--FIPHETGFIPALK-------- 203
Query: 257 ESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS 294
++ +W ++ SL+K +++PG R+G + ++++ ++
Sbjct: 204 DNPHIW----VLRSLTKFYAIPGLRLGYLVNSDDAAMA 237
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 30/212 (14%)
Query: 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRI 171
++ G A + ++ GDA L+ +P Y F R ++ H N +I
Sbjct: 122 ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND-------HRLVENSLQI 174
Query: 172 TISALENAYQQAQ--TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229
E ++Q + ++ VK L+ +P NP G + +L + K + +VSDE
Sbjct: 175 INGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234
Query: 230 IYSG-TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288
I+ +F + S ++ + D I I+ S +K F++ G +
Sbjct: 235 IHQDLALFGNTHHSLNTLDASYKDFTI-----------ILSSATKTFNIAGTKNSFAIIQ 283
Query: 289 NE---------RVVSAATKMSSFGLVSSQTQY 311
NE ++ + ++ + G++++Q +
Sbjct: 284 NESLRRKFQYRQLANNQHEVPTVGMIATQAAF 315
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 157/394 (39%), Gaps = 55/394 (13%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCK 123
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS----NGFRITISALENAY 180
+ + +PGD LL P Y G + L G I+ + S + R +S +
Sbjct: 124 VFEMIINPGDNVLLDEPAYSGTLQSLHPL-GCNIINVASDESGIVPDSLRDILSRWKPED 182
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240
+ N + N +NP G ++T + + ++ I+ D+ Y F+S
Sbjct: 183 AKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGR 242
Query: 241 -SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSAA 296
+F+S+ D+ R+ S SK S G R+G + ERV+
Sbjct: 243 VPTFLSM-------------DVDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVI-LH 287
Query: 297 TKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLKV 347
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 288 IQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAE 346
Query: 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG--- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 347 WHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP 396
Query: 405 WFRICFANITEETLQVALQRIKVFAQSCNPQMLL 438
+ R F++ + E + VA Q V AQ +L+
Sbjct: 397 YLRASFSSASPEQMDVAFQ---VLAQLIKESLLV 427
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLP 139
+ +Y G + L +A G V + L++T G+ A + GD +
Sbjct: 74 YTEYRGDLGIRDLLAPRLAAFTGAPVDAR-DGLIITPGTQGALFLAVAATVARGDKVAIV 132
Query: 140 TPYYPGFDRDLKWRPGVEIVPIHCS--SSNGFR--ITISALENAYQQAQTLNLKVKGVLI 195
P Y + +++ G E VP+ S++ R + ++ LE A++ + L
Sbjct: 133 QPDYFANRKLVEFFEG-EXVPVQLDYVSADETRAGLDLTGLEEAFKAGARV------FLF 185
Query: 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255
+NP+NP G + +E+ + + +++D++YS + S + + AV N
Sbjct: 186 SNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAEN- 244
Query: 256 DESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN 289
+ + S S+ G+R+G+ + +
Sbjct: 245 ---------VVTIXGPSXTESLSGYRLGVAFGSR 269
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 123/332 (37%), Gaps = 33/332 (9%)
Query: 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK-WRPGVEIVPIHCSSSNGF 169
+++ AGS A + + +PGD ++ P Y + K + P +P+ G
Sbjct: 108 EIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPL---DDKGM 164
Query: 170 RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229
R+ + + + Q +K+ + T NP G M+ L+ + IV D
Sbjct: 165 RVDLLEEKLEELRKQGKRVKIVYTVSTF-QNPAGVTMSVDRRKKLLELANEYDFLIVEDG 223
Query: 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN 289
YS + + I DD + R+ + + SK + PGFR+G + ++
Sbjct: 224 PYSELRYSGEPTP-----------PIKHFDD-YGRVIYLGTFSKILA-PGFRIGWVAAHP 270
Query: 290 ERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYXXXXXXXXXXXXXXXVSGLK--- 346
+ S L ++ ++ + + + + L+
Sbjct: 271 HLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYM 330
Query: 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSS--CHCNEPG 404
G+ K G+F V + + E+ + K G+ PG + H ++
Sbjct: 331 PEGVEWTKPEGGMFVRVTLPE-GIDTKLMMERAVAK------GVAYVPGEAFFVHRDKKN 383
Query: 405 WFRICFANITEETLQVALQRIKVFAQSCNPQM 436
R+ F + EET++ ++R+ A++ +M
Sbjct: 384 TMRLNFTYVPEETIREGVRRL---AETIKEEM 412
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 8/146 (5%)
Query: 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGF-R 170
++ TAG A + PGD ++ TP Y F +K +I+ +G+
Sbjct: 92 IINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK-NQERKIIECELLEKDGYYT 150
Query: 171 ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230
I LE + K +L +P NP+G EL + + + + SDEI
Sbjct: 151 IDFQKLEKLSKDKNN-----KALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEI 205
Query: 231 YSGTVFDS-PSSSFISIMEAVMDRNI 255
+ + + F SI E + D+ I
Sbjct: 206 HFDLIMPGYEHTVFQSIDEQLADKTI 231
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 146 FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA 205
F+ D++ +E + C+ NGF +S + + + +P+NP G A
Sbjct: 168 FNTDVQKYGNIEY--MRCTPENGFFPDLSTVG-----------RTDIIFFCSPNNPTGAA 214
Query: 206 MTHQELNHLINFSKSKRIHIVSDEIYSGTVF-DSPSSSF 243
T ++L L+ F+K IV D Y+ + D+P S F
Sbjct: 215 ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIF 253
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 146 FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA 205
F+ D++ +E + C+ NGF +S + + + +P+NP G A
Sbjct: 168 FNTDVQKYGNIEY--MRCTPENGFFPDLSTVG-----------RTDIIFFCSPNNPTGAA 214
Query: 206 MTHQELNHLINFSKSKRIHIVSDEIYSGTVF-DSPSSSF 243
T ++L L+ F+K IV D Y+ + D+P S F
Sbjct: 215 ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIF 253
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 146 FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA 205
F+ D++ +E + C+ NGF +S + + + +P+NP G A
Sbjct: 168 FNTDVQKYGNIEY--MRCTPENGFFPDLSTVG-----------RTDIIFFCSPNNPTGAA 214
Query: 206 MTHQELNHLINFSKSKRIHIVSDEIYSGTVF-DSPSSSF 243
T ++L L+ F+K IV D Y+ + D+P S F
Sbjct: 215 ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIF 253
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKR--IHIVSDEIYSGTVFDSPSSSFISIM 247
+K NPSNP M + L + R + I++D++Y GT D S F
Sbjct: 246 IKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY-GTFADGFQSLF---- 300
Query: 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA 296
A+ N +VYS SK F G+R+G++ ++ E + A
Sbjct: 301 -AICPANT----------LLVYSFSKYFGATGWRLGVVAAHKENIFDLA 338
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRN 254
+ NP+NP G + E+ L+N D + V D SF + E + +
Sbjct: 135 LCNPNNPDGRLLQRTEILRLLN-----------DHPDTTFVLDQSYVSFTT-EEVIRPAD 182
Query: 255 IDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE---RVVSAATKMSSFGLVSSQTQY 311
I +L VYS S + +PG R+G I +N + RV + +T + L ++
Sbjct: 183 IKGRKNLVX----VYSFSHAYGIPGLRIGYIVANKDFXKRVAAFSTPWAVNALAIEAAKF 238
Query: 312 LL 313
+L
Sbjct: 239 IL 240
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 47/203 (23%)
Query: 83 YHGFPDAKKELVKLMARIRGNKVK--FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPT 140
Y GF DAK+ + A++ ++ F PN+ V + DP
Sbjct: 89 YRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTV--------------AIQDPS------- 127
Query: 141 PYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSN 200
YP + + EI+ + C ENA+ + + + + +P+N
Sbjct: 128 --YPAYLDIARLTGAKEIIALPCLQ-----------ENAFFPEFPEDTHIDILCLCSPNN 174
Query: 201 PLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260
P GT + +L +++++ I I +FD+ S+FIS + + ++I E D
Sbjct: 175 PTGTVLNKDQLRAIVHYAIEHEILI---------LFDAAYSTFIS--DPSLPKSIFEIPD 223
Query: 261 LWSRIHIVYSLSKDFSMPGFRVG 283
+ S SK G R+G
Sbjct: 224 ARFCAIEINSFSKPLGFAGIRLG 246
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 156/394 (39%), Gaps = 55/394 (13%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCK 123
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS----NGFRITISALENAY 180
+ + +PGD LL P Y G + L G I+ + S + R +S +
Sbjct: 124 VFEMIINPGDNVLLDEPAYSGTLQSLHPL-GCNIINVASDESGIVPDSLRDILSRWKPED 182
Query: 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS-P 239
+ N + N +NP G ++T + + ++ I+ D+ Y F+
Sbjct: 183 AKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFR 242
Query: 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSAA 296
+F+S+ D+ R+ S SK S G R+G + ERV+
Sbjct: 243 VPTFLSM-------------DVDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVI-LH 287
Query: 297 TKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLKV 347
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 288 IQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAE 346
Query: 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG--- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 347 WHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP 396
Query: 405 WFRICFANITEETLQVALQRIKVFAQSCNPQMLL 438
+ R F++ + E + VA Q V AQ +L+
Sbjct: 397 YLRASFSSASPEQMDVAFQ---VLAQLIKESLLV 427
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 154/387 (39%), Gaps = 57/387 (14%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCK 123
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRP-GVEIVPIHCSSS----NGFRITISALENA 179
+ + +PGD LL P Y G + L P G I+ + S + R +S +
Sbjct: 124 VFEMIINPGDNVLLDEPAYSGTLQSL--HPLGCNIINVASDESGIVPDSLRDILSRWKPE 181
Query: 180 YQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS- 238
+ N + N +NP G ++T + + ++ I+ D+ Y F+
Sbjct: 182 DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF 241
Query: 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSA 295
+F+S+ D+ R+ S SK S G R+G + ERV+
Sbjct: 242 RVPTFLSM-------------DVDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVI-L 286
Query: 296 ATKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLK 346
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 287 HIQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLA 345
Query: 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG-- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 346 EWHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPS 395
Query: 405 -WFRICFANITEETLQVALQRIKVFAQ 430
+ R F++ + E + VA Q V AQ
Sbjct: 396 PYLRASFSSASPEQMDVAFQ---VLAQ 419
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 146 FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA 205
F+ D++ +E C+ NGF +S + + + +P+NP G A
Sbjct: 168 FNTDVQKYGNIEYX--RCTPENGFFPDLSTVG-----------RTDIIFFCSPNNPTGAA 214
Query: 206 MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEA 249
T ++L L+ F+K IV D Y+ D S I A
Sbjct: 215 ATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGA 258
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 154/387 (39%), Gaps = 57/387 (14%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCK 123
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRP-GVEIVPIHCSSS----NGFRITISALENA 179
+ + +PGD LL P Y G + L P G I+ + S + R +S +
Sbjct: 124 VFEMIINPGDNVLLDEPAYSGTLQSL--HPLGCNIINVASDESGIVPDSLRDILSRWKPE 181
Query: 180 YQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS- 238
+ N + N +NP G ++T + + ++ I+ D+ Y F+
Sbjct: 182 DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF 241
Query: 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSA 295
+F+S+ D+ R+ S SK S G R+G + ERV+
Sbjct: 242 RVPTFLSM-------------DVDGRVIRADSFSKIISS-GLRIGFLTGPKPLIERVI-L 286
Query: 296 ATKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLK 346
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 287 HIQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLA 345
Query: 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG-- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 346 EWHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPS 395
Query: 405 -WFRICFANITEETLQVALQRIKVFAQ 430
+ R F++ + E + VA Q V AQ
Sbjct: 396 PYLRASFSSASPEQMDVAFQ---VLAQ 419
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252
V++ NPSNP G A++ EL+ L + + ++ DE Y SSF + A +
Sbjct: 139 VVLANPSNPTGQALSAGELDQL----RQRAGKLLIDETY------VDYSSFRARGLAYGE 188
Query: 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299
+ + S SK + + G R+G ++ +E + + K
Sbjct: 189 NEL-----------VFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQ 224
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 130 ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS-SNGFRITISALENAYQQAQTLNL 188
++ G+ ++ TP Y F + ++ ++P+ ++G+ + LE + +
Sbjct: 108 SETGEGVVIHTPAYDAFYKAIEGNQRT-VMPVALEKQADGWFCDMGKLEAVLAKPE---- 162
Query: 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236
K +L+ +P NP G T EL + + + + ++SDEI+ V+
Sbjct: 163 -CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVW 209
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 19/181 (10%)
Query: 134 DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193
D LLP + + R G + +G T S +E Q+ N K K +
Sbjct: 138 DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVE----ALQSYN-KDKVI 192
Query: 194 LITN-PSNPLGTAMTHQELNHLIN-----FSKSKRIHIVSDEIYSGTVFDSPSSSFISIM 247
+I N P+NP G TH+E+ ++ +K ++ V D+ Y G ++ + S+
Sbjct: 193 MILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQ--SLF 250
Query: 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVG-MIYSNNERVVSAATKMSSFGLVS 306
A+ N+ + L R+ +K+F GFRVG M + +++ + GL+
Sbjct: 251 TALT--NLHSNAILPIRLD---GATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIR 305
Query: 307 S 307
S
Sbjct: 306 S 306
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS---------GTVFDSPSSSF 243
+ +P+NP G A T +L L+NF++ +V D Y+ T+++ P +
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADE 272
Query: 244 ISI 246
++I
Sbjct: 273 VAI 275
>pdb|3KGX|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGX|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGW|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
pdb|3KGW|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
Length = 393
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 90 KKELVKLMARIR-GNKVKF---DPNKLVLTAGSTAANETLMFCLADPGDAFLLPT 140
+KE++++M I+ G + F +P LV++ A ET +F L +PGD+FL T
Sbjct: 51 QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGT 105
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 29/200 (14%)
Query: 90 KKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD 149
+ EL + + G V D L GS + L+ PG L + P +
Sbjct: 72 RDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAFGGPGRTAL---GFQPSYSMH 126
Query: 150 LKWRPGVEIVPIHCSSSNGFRITIS-ALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTH 208
G I S FRI + ALE + + V +T P+NP G +
Sbjct: 127 PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDI------VFVTTPNNPTGDVTSL 180
Query: 209 QELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268
++ +IN + ++ DE Y+ SPS S +++E +++ +
Sbjct: 181 DDVERIINVAPGI---VIVDEAYAEF---SPSPSATTLLE-----------KYPTKLVVS 223
Query: 269 YSLSKDFSMPGFRVGMIYSN 288
++SK F G R+G +N
Sbjct: 224 RTMSKAFDFAGGRLGYFVAN 243
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 29/200 (14%)
Query: 90 KKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD 149
+ EL + + G V D L GS + L+ PG L + P +
Sbjct: 75 RDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAFGGPGRTAL---GFQPSYSMH 129
Query: 150 LKWRPGVEIVPIHCSSSNGFRITIS-ALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTH 208
G I S FRI + ALE + + V +T P+NP G +
Sbjct: 130 PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDI------VFVTTPNNPTGDVTSL 183
Query: 209 QELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268
++ +IN + ++ DE Y+ SPS S +++E +++ +
Sbjct: 184 DDVERIINVAPGI---VIVDEAYAEF---SPSPSATTLLE-----------KYPTKLVVS 226
Query: 269 YSLSKDFSMPGFRVGMIYSN 288
++SK F G R+G +N
Sbjct: 227 RTMSKAFDFAGGRLGYFVAN 246
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 153/387 (39%), Gaps = 57/387 (14%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 66 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCK 125
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRP-GVEIVPIHCSSS----NGFRITISALENA 179
+ + +PGD LL P Y G + L P G I+ + S + R +S +
Sbjct: 126 VFEMIINPGDNVLLDEPAYSGTLQSL--HPLGCNIINVASDESGIVPDSLRDILSRWKPE 183
Query: 180 YQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS- 238
+ N + N +NP G ++T + + ++ I+ D+ Y F+
Sbjct: 184 DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF 243
Query: 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSA 295
+F+S+ D+ R+ S S S G R+G + ERV+
Sbjct: 244 RVPTFLSM-------------DVDGRVIRADSFSXIISS-GLRIGFLTGPKPLIERVI-L 288
Query: 296 ATKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLK 346
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 289 HIQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLA 347
Query: 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG-- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 348 EWHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPS 397
Query: 405 -WFRICFANITEETLQVALQRIKVFAQ 430
+ R F++ + E + VA Q V AQ
Sbjct: 398 PYLRASFSSASPEQMDVAFQ---VLAQ 421
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 153/387 (39%), Gaps = 57/387 (14%)
Query: 70 GESLFRELALFQDYHGFPDAKKELVKLMARIRGNK-VKFDPNK----LVLTAGSTAANET 124
GE + + + G P+ L +L ++ + + P++ L +T+GS
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCK 123
Query: 125 LMFCLADPGDAFLLPTPYYPGFDRDLKWRP-GVEIVPIHCSSS----NGFRITISALENA 179
+ + +PGD LL P Y G + L P G I+ + S + R +S +
Sbjct: 124 VFEMIINPGDNVLLDEPAYSGTLQSL--HPLGCNIINVASDESGIVPDSLRDILSRWKPE 181
Query: 180 YQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS- 238
+ N + N +NP G ++T + + ++ I+ D+ Y F+
Sbjct: 182 DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF 241
Query: 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN---ERVVSA 295
+F+S+ D+ R+ S S S G R+G + ERV+
Sbjct: 242 RVPTFLSM-------------DVDGRVIRADSFSXIISS-GLRIGFLTGPKPLIERVI-L 286
Query: 296 ATKMSSFGLVSSQTQYLLSRML---SDKKF------TCNYXXXXXXXXXXXXXXXVSGLK 346
++S+ S+ Q ++S++L ++ F ++ ++GL
Sbjct: 287 HIQVSTLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLA 345
Query: 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG-- 404
+ AG+F W+ ++ + KEL ++ ++G+ + PG++ + +
Sbjct: 346 EWHVPA----AGMFLWIKVKGI------NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPS 395
Query: 405 -WFRICFANITEETLQVALQRIKVFAQ 430
+ R F++ + E + VA Q V AQ
Sbjct: 396 PYLRASFSSASPEQMDVAFQ---VLAQ 419
>pdb|1FWY|A Chain A, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase Bound To Udp-Glcnac
pdb|1FWY|B Chain B, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase Bound To Udp-Glcnac
pdb|1FXJ|A Chain A, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase
pdb|1FXJ|B Chain B, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase
Length = 331
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 150 LKWRPGVEIVPIH---CSSSNGF--RITISALENAYQQAQTLNLKVKGVLITNPSN-PLG 203
L ++ G EIV +H S G R+ +S LE YQ Q L + GV++ +P+ L
Sbjct: 204 LAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLR 263
Query: 204 TAMTH 208
+TH
Sbjct: 264 GTLTH 268
>pdb|1HV9|A Chain A, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|1HV9|B Chain B, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|2OI5|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI5|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI6|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI6|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI7|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
pdb|2OI7|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
Length = 456
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 150 LKWRPGVEIVPIH---CSSSNGF--RITISALENAYQQAQTLNLKVKGVLITNPSN-PLG 203
L ++ G EIV +H S G R+ +S LE YQ Q L + GV++ +P+ L
Sbjct: 204 LAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLR 263
Query: 204 TAMTH 208
+TH
Sbjct: 264 GTLTH 268
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248
+ K V + +P+NP G+ + + + I SDE YS FD
Sbjct: 168 RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAA 227
Query: 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE 290
A + R+ ++ SLS ++PG R G + + E
Sbjct: 228 AQLGRSR-------QKLLXFTSLSXRSNVPGLRSGFVAGDAE 262
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEA 249
+ +P+NP G + ++L+ L++F+K+ I+ D Y+ + D S I A
Sbjct: 216 IFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGA 272
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 29/200 (14%)
Query: 90 KKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD 149
+ EL + + G V D L GS + L+ PG L + P +
Sbjct: 75 RDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAFGGPGRTAL---GFQPSYSMH 129
Query: 150 LKWRPGVEIVPIHCSSSNGFRITIS-ALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTH 208
G I S FRI + ALE + + V +T P+NP G +
Sbjct: 130 PILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDI------VFVTTPNNPTGDVTSL 183
Query: 209 QELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268
++ +IN + ++ DE Y+ SPS S +++E +++ +
Sbjct: 184 DDVERIINVAPGI---VIVDEAYAEF---SPSPSATTLLE-----------KYPTKLVVS 226
Query: 269 YSLSKDFSMPGFRVGMIYSN 288
++S F G R+G +N
Sbjct: 227 RTMSXAFDFAGGRLGYFVAN 246
>pdb|2YL9|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YL9|B Chain B, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YL9|C Chain C, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YL9|D Chain D, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 457
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 200 NPLGTAMTHQELNHLINFSKSKRIHIV 226
+P GTA+T E+ LI ++KSK I ++
Sbjct: 103 DPNGTALTQAEVTELIEYAKSKDIGLI 129
>pdb|2YL5|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YL5|B Chain B, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YL5|C Chain C, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YL5|D Chain D, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 442
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 200 NPLGTAMTHQELNHLINFSKSKRIHIV 226
+P GTA+T E+ LI ++KSK I ++
Sbjct: 86 DPNGTALTQAEVTELIEYAKSKDIGLI 112
>pdb|2YLA|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YLA|B Chain B, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YLA|C Chain C, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
pdb|2YLA|D Chain D, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 442
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 200 NPLGTAMTHQELNHLINFSKSKRIHIV 226
+P GTA+T E+ LI ++KSK I ++
Sbjct: 86 DPNGTALTQAEVTELIEYAKSKDIGLI 112
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252
V I NP+NP G +E+ ++ + DE Y ++ S++ ++
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTGA----FVALDEAY----YEFHGESYVDFLKK--- 190
Query: 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299
+ + ++ + SK FS+ RVG + + +E+ + A ++
Sbjct: 191 ---------YENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRV 227
>pdb|3QF4|B Chain B, Crystal Structure Of A Heterodimeric Abc Transporter In
Its Inward- Facing Conformation
Length = 598
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 18 FLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLE-SWLASNQEAVELKR-NGESLFR 75
F+G+ P ++L N +IQM LA + F++L+ + +AVEL+ GE F+
Sbjct: 299 FIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDAVELREVRGEIEFK 358
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252
V I NP+NP G +E+ ++ + DE Y ++ S++ ++
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTGA----FVALDEAY----YEFHGESYVDFLKK--- 190
Query: 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299
+ + ++ + SK FS+ RVG + + +E+ + A ++
Sbjct: 191 ---------YENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRV 227
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252
V I NP+NP G +E+ ++ + DE Y ++ S++ ++
Sbjct: 154 VFIPNPNNPTGHVFEREEIERILKTGA----FVALDEAY----YEFHGESYVDFLKK--- 202
Query: 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299
+ + ++ + SK FS+ RVG + + +E+ + A ++
Sbjct: 203 ---------YENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRV 239
>pdb|2YET|A Chain A, Thermoascus Gh61 Isozyme A
pdb|2YET|B Chain B, Thermoascus Gh61 Isozyme A
pdb|3ZUD|A Chain A, Thermoascus Gh61 Isozyme A
Length = 228
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 169 FRITISALENAYQQ------AQTLNLKVKGVLITNPSNPLGTAMTHQ-ELNHLINFSKSK 221
R I AL +A Q Q +NL+V G NP+ LGTA+ H + LIN +
Sbjct: 156 LRHEIIALHSAQNQDGAQNYPQCINLQVTGGGSDNPAGTLGTALYHDTDPGILINIYQKL 215
Query: 222 RIHIV-SDEIYSG 233
+I+ +Y+G
Sbjct: 216 SSYIIPGPPLYTG 228
>pdb|1WA5|C Chain C, Crystal Structure Of The Exportin Cse1p Complexed With Its
Cargo (Kap60p) And Rangtp
Length = 960
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG--TVFDSPSSSFIS 245
+++ ++ NPSNP T T + + ++N+++ + + ++ D + TVF FI
Sbjct: 600 IEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIP 659
Query: 246 IMEAVMDRNIDES 258
+ ++ +++S
Sbjct: 660 YVFQIIAFVVEQS 672
>pdb|1Z3H|A Chain A, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State
pdb|1Z3H|B Chain B, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State
Length = 968
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG--TVFDSPSSSFIS 245
+++ ++ NPSNP T T + + ++N+++ + + ++ D + TVF FI
Sbjct: 600 IEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIP 659
Query: 246 IMEAVMDRNIDES 258
+ ++ +++S
Sbjct: 660 YVFQIIAFVVEQS 672
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,850,325
Number of Sequences: 62578
Number of extensions: 502861
Number of successful extensions: 1202
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1061
Number of HSP's gapped (non-prelim): 106
length of query: 464
length of database: 14,973,337
effective HSP length: 102
effective length of query: 362
effective length of database: 8,590,381
effective search space: 3109717922
effective search space used: 3109717922
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)